BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038606
         (666 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/666 (65%), Positives = 522/666 (78%), Gaps = 2/666 (0%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS LS AR+ APL +L+ D+V SRC MSPGALGF IRCLGS GLVEEAN+LFDQVK   
Sbjct: 134 MASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMR 193

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LCVPN+YS+NCLLEA+ KS S+DLVEMRLKEM D GW  DKYTLT +LQ YCNS +FDKA
Sbjct: 194 LCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKA 253

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           LSVFNEI   GWVD HV SIL++ FSK GEVDKA ELIERM+D  IRLNEKTFCVLIHGF
Sbjct: 254 LSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGF 313

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           V++SRVDKALQLF KM KSGFA D ++YD +IGGLC  K++E AL L SEMK  GI PD 
Sbjct: 314 VRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDI 373

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +ILSKLI  CS+E ++  L++E  ED D   M LL NS++  LV+  S+D+AY LL+AM 
Sbjct: 374 QILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMT 433

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 +  V    + K  V P+T+SF I+I+ L   GKLDLALSLFR+M ++GC QNV 
Sbjct: 434 GDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVL 493

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           LYNNLID L NSNRLEE Y LL+EM+ SGF+PT FT NS+F CLCRR+DV GAL++VR+M
Sbjct: 494 LYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREM 553

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           RV GHEPW+KH TLL+K+LCK  ++ EA  FL +MV+EGFLPDIV YSAAI G + IK V
Sbjct: 554 RVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAV 613

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D ALE+FRDICA G CPDVVAYN +I+G CK +RV+EA D+ +EM+ KGL+PSV TYNLL
Sbjct: 614 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLL 673

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+GWCK+G+IDQA  CLSRM+ KE   P+VITYTTLIDGLC AGRPDDAI LWNEM  KG
Sbjct: 674 IDGWCKNGDIDQAFHCLSRMVGKER-EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 732

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C+PNRI+F+ALI GLCKC  P AAL++FR M E+   PD  V+VALI++F+S  NP LAF
Sbjct: 733 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAF 791

Query: 661 EVLKEM 666
           E+LKEM
Sbjct: 792 EILKEM 797



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 133/588 (22%), Positives = 236/588 (40%), Gaps = 79/588 (13%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           +  R ++    L  L+      G V++A  L ++++  G+ + N  ++  L+    +   
Sbjct: 260 IYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRL-NEKTFCVLIHGFVRQSR 318

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSI 140
           VD      K+MQ  G+  D      L+   C   + +KAL + +E+ + G   D  + S 
Sbjct: 319 VDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSK 378

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+   S+  EVD    + ER++D +       +  +++G V    VDKA  L   MT   
Sbjct: 379 LIAYCSE--EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDN 436

Query: 201 FAS----------------DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           +                  D   + ++I GLC   +L++AL L+ +M   G   +  + +
Sbjct: 437 YTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYN 496

Query: 245 KLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSI-------------------MRI 282
            LI   S+   L    LL+KE+ +           NSI                   MR+
Sbjct: 497 NLIDKLSNSNRLEECYLLLKEM-KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRV 555

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                 I     L++ + K +  A+    +  + +    P+  ++   I+  +K   +D 
Sbjct: 556 HGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQ 615

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +FR++   G   +V  YN LI+G C   R+ E++++L EM   G  P+  T N +  
Sbjct: 616 ALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG--- 459
             C+  D+  A + + +M  +  EP V   T LI  LC  G+  +A     +M  +G   
Sbjct: 676 GWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSP 735

Query: 460 ----FL---------------------------PDIVCYSAAIGGLIDIKRVDLALELFR 488
               F+                           PD + Y A I   I  K   LA E+ +
Sbjct: 736 NRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILK 795

Query: 489 DICAHGCCPDVVAYN--IIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           ++ A G  PD +  N   +   + +    A        +I +G IP++
Sbjct: 796 EMVAKGKFPDPLDKNDLPLRDAILELAEDASTSSNVKNLIAEGRIPTI 843



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 16/312 (5%)

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-EMEESGFKPTHFTLNSMFRCLCR 406
           +E+   G M    +  N++ GL      + +Y       ++ GF    +T N+M  CL  
Sbjct: 84  QELRNFGSMLTHEVVENVLSGL---KSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSH 140

Query: 407 -RQDVVGALNLVRKMRVQGHEPWVKHNTL--LIKELCKHGKAMEAFRFLTDMVQEGFL-- 461
            RQ+    L+L+  M +      +    L   I+ L   G   EA   L D V+   L  
Sbjct: 141 ARQN--APLSLL-SMDIVNSRCAMSPGALGFFIRCLGSTGLVEEA-NLLFDQVKMMRLCV 196

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+   ++  +  +     +DL     +++C  G  PD      ++   C +++  +A  +
Sbjct: 197 PNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           FNE+  +G +      ++L+  + K G +D+A   + RM E      +  T+  LI G  
Sbjct: 257 FNEIYGRGWVDG-HVLSILVLTFSKCGEVDKAFELIERM-EDLGIRLNEKTFCVLIHGFV 314

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
              R D A+ L+ +M++ G AP+   + ALI GLC       AL     MKE G+ PD+ 
Sbjct: 315 RQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQ 374

Query: 642 VFVALISAFLSE 653
           +   LI A+ SE
Sbjct: 375 ILSKLI-AYCSE 385


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/666 (64%), Positives = 528/666 (79%), Gaps = 1/666 (0%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MASILSRAR+ APLR L+ DVV SRC MSPGALGFLIRCLG+ GLV EAN+LFDQV++ G
Sbjct: 1   MASILSRARQKAPLRALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMG 60

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LCVPN+YSY CLLE L KS  +DL+EMRLKEM D+GWG+DKYTLTP+LQVYCN  +FDKA
Sbjct: 61  LCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKA 120

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           L VFNEI D GWVDE+VFSIL++AFSKWG+VDKACELIE M++ N+RLN+KTFC LI+GF
Sbjct: 121 LDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGF 180

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           VK+SRVDKAL LFDKM KSGF  D ++YDVIIGGLC NK ++ AL LYSEMKG  I PD 
Sbjct: 181 VKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDV 240

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +I++KLI+S S E ELT   +E+ ED D    TLL NS++  LV NGS+ +AY+LLQA+ 
Sbjct: 241 KIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAIT 300

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            G  I D  +  L   K  V PN+++F I+IN L+K G LDLA+ LFR+M +IGC  ++ 
Sbjct: 301 IGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLL 360

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           LYNNLIDGLC SNRL+ES  LL+EMEESG +PT FT N +F CLCRR D+ GAL+L++KM
Sbjct: 361 LYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKM 420

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R+ GH PW+KH+T L+KELCKHGK +EA +FL DM +EGF PDIV YSA + GLI I+ V
Sbjct: 421 RIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEV 480

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D AL+LF+DICA G CPDV+AYNI+I GLCK QR+AEA++L +EM  KGL+PS  TYN L
Sbjct: 481 DQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTL 540

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G CK+ ++++AML LS M+EKE   P+VITY+TLI+GLC AGRPDDA++LWNEM  KG
Sbjct: 541 IDGLCKTDHLEEAMLFLSMMIEKER-EPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C P+ I +MA I GL  C RP  ALV+ R M+E+ MKPD +V+V L++AFL + N PLAF
Sbjct: 600 CTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAF 659

Query: 661 EVLKEM 666
           E+L+EM
Sbjct: 660 EILQEM 665



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 137/558 (24%), Positives = 239/558 (42%), Gaps = 44/558 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A  LFD++K+ G   P+   Y+ ++  LC +  V        EM+ +    D   +T
Sbjct: 186 VDKALHLFDKMKKSGF-TPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVT 244

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            L+  +    +        +E +D       +++ +L +    G V KA  L++ +   N
Sbjct: 245 KLISSFSKEEELTCFFEEMHEDMDPK-ASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGN 303

Query: 166 ----------------IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
                           +  N  TF ++I+G +K   +D A+ LF  M + G   D  +Y+
Sbjct: 304 CIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYN 363

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC-----SDEGELTLLVKEIW 264
            +I GLC + +L+ +  L  EM+ SGI P     +  I  C        G L LL K   
Sbjct: 364 NLIDGLCTSNRLQESCGLLQEMEESGIEPT-SFTNNCIFGCLCRRHDISGALHLLKK--- 419

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                          MRI      I  + +L++ + K     +    ++ + +    P+ 
Sbjct: 420 ---------------MRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDI 464

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++   ++ L+K  ++D AL LF+++   G   +V  YN LI GLC + R+ E+  LL E
Sbjct: 465 VAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHE 524

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           MEE G  P+  T N++   LC+   +  A+  +  M  +  EP V   + LI  LC  G+
Sbjct: 525 MEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGR 584

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A     +M ++G  P  + Y A I GL +  R + AL   R++      PD   Y  
Sbjct: 585 PDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVG 644

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI--NGWCKSGNIDQAMLCLSRMLE 562
           +++          A ++  EM+ KG  P +   N +   N   K     +    +  +L 
Sbjct: 645 LLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSEDARTSSSIKNLLA 704

Query: 563 KESGSPDVITYTTLIDGL 580
           K S     ++ T + DG+
Sbjct: 705 KGSIPSASLSVTGITDGV 722


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/666 (61%), Positives = 485/666 (72%), Gaps = 42/666 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS LS AR+ APL +L+ D+V SRC MSPGALG                          
Sbjct: 134 MASCLSHARQNAPLSLLSMDIVNSRCAMSPGALG-------------------------- 167

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
                         A+ KS S+DLVEMRLKEM D GW  DKYTLT +LQ YCNS +FDKA
Sbjct: 168 --------------AISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKA 213

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           LSVFNEI   GWVD HV SIL++ FSK GEVDKA ELIERM+D  IRLNEKTFCVLIHGF
Sbjct: 214 LSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGF 273

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           V++SRVDKALQLF KM KSGFA D ++YD +IGGLC  K++E AL L SEMK  GI PD 
Sbjct: 274 VRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDI 333

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +ILSKLI  CS+E ++  L++E  ED D   M LL NS++  LV+  S+D+AY LL AM 
Sbjct: 334 QILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMT 393

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 +  V    + K  V P T+SF I+I+ L   GKLDLALSLFR+M ++GC QNV 
Sbjct: 394 GDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVL 453

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           LYNNLID L NSNRLEE Y LL+EM+ SGF+PT FT NS+F CLCRR+DV GAL++VR+M
Sbjct: 454 LYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREM 513

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           RV GHEPW+KH TLL+K+LCK  ++ EA  FL +MV+EGFLPDIV YSAAI G + IK V
Sbjct: 514 RVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAV 573

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D ALE+FRDICA G CPDVVAYN +I+G CK +RV+EA D+ +EM+ KGL+PSV TYNLL
Sbjct: 574 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLL 633

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+GWCK+G+IDQA  CLSRM+ KE   P+VITYTTLIDGLC AGRPDDAI LWNEM  KG
Sbjct: 634 IDGWCKNGDIDQAFHCLSRMVGKER-EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG 692

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C+PNRI+F+ALI GLCKC  P AAL++FR M E+   PD  V+VALI++F+S  NP LAF
Sbjct: 693 CSPNRISFIALIHGLCKCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAF 751

Query: 661 EVLKEM 666
           E+LKEM
Sbjct: 752 EILKEM 757



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 97/433 (22%), Positives = 158/433 (36%), Gaps = 117/433 (27%)

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-EMEESGFKPTHFTLNSMFRCLCR 406
           +E+   G M    +  N++ GL      + +Y       ++ GF    +T N+M  CL  
Sbjct: 84  QELRNFGSMLTHEVVENVLSGL---KSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSH 140

Query: 407 -RQ---------DVV--------GALNLVRK--------MRVQ-----GHEP-------- 427
            RQ         D+V        GAL  + K        MR++     G EP        
Sbjct: 141 ARQNAPLSLLSMDIVNSRCAMSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSV 200

Query: 428 ------------------------WVKHNTL--LIKELCKHGKAMEAFRFLTDMVQEGFL 461
                                   WV  + L  L+    K G+  +AF  +  M   G  
Sbjct: 201 LQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIR 260

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            +   +   I G +   RVD AL+LF+ +   G  PDV  Y+ +I GLC  + + +A  L
Sbjct: 261 LNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHL 320

Query: 522 FNEMITKGLIPSVAT---------------------------------YNLLINGWCKSG 548
            +EM   G+ P +                                   YN ++NG     
Sbjct: 321 LSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGK 380

Query: 549 NIDQAMLCLSRM---------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           ++D+A   L  M               + KE   P   +++ +IDGLC  G+ D A+ L+
Sbjct: 381 SVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLF 440

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            +M   GC  N + +  LI  L   +R     +  + MK  G +P  F   ++       
Sbjct: 441 RDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRR 500

Query: 654 LNPPLAFEVLKEM 666
            +   A ++++EM
Sbjct: 501 EDVTGALDMVREM 513


>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
 gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/670 (57%), Positives = 509/670 (75%), Gaps = 7/670 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +ASILS AR+ APLR +A DV+  RC M+P ALG  +RCLGSVGLVEEAN LFDQV+   
Sbjct: 128 IASILSHARKNAPLRAVAMDVLNFRCSMTPRALGVFLRCLGSVGLVEEANYLFDQVRSMD 187

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LC+PNNYSYNCLLE L K+ S+D +E RL EM+D+GW  DKYTLTP+L  YCN+G+FDKA
Sbjct: 188 LCIPNNYSYNCLLEILSKTNSIDSIENRLMEMKDFGWEVDKYTLTPVLMAYCNAGKFDKA 247

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           L VFN++ + GWVD +VFSIL +AFSKWGEVD+  + I+RM+D N+ LN KTF  LIHGF
Sbjct: 248 LIVFNDMHERGWVDGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLMLNGKTFYALIHGF 307

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           VK+SR D AL+L +KM K GF  D ++YDV+IGGLCK +  E A+ L+ +MK  GITPD 
Sbjct: 308 VKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFKMKMLGITPDV 367

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +IL+KL+ S  +E  + +L+ E  +D +   M  L NS+++ LV+ G ++    LLQ M+
Sbjct: 368 QILAKLVASSPEERVVIMLLGERPKDINDEGMIFLFNSVLKFLVNAGKVESTCYLLQLMM 427

Query: 301 KGEPIADVGVEMLMIFKG--TVSPNTSSFDIIINTLLK-DGKL--DLALSLFREMTQIGC 355
             E  +D  + +L I +    + PNT+SF+I+I+ LLK   KL  D ALSLF +M Q+GC
Sbjct: 428 GNESRSD-NIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGC 486

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
            ++  LYNNLID LC S+RL+ESY+LLR+ME+S  +PTHFT NS+F CLCRR+D VGA+ 
Sbjct: 487 ERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIE 546

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+R+MR  GHEPW+KH+TLL+K+LCK+G+A+EA  FL DMV EGFLPDIV YSAA+ GL+
Sbjct: 547 LLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLV 606

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I ++D ALELF+DIC  GC PDVV++NI+I G CKA +V EA +  ++M   GL+PS  
Sbjct: 607 KINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAV 666

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YNLLIN WCK+G+ID+A+LCLS+M E E+  P +I+YTTLI+G C +GRPDDA +LWNE
Sbjct: 667 SYNLLINEWCKNGDIDKAILCLSQMNE-ENKKPTIISYTTLINGCCNSGRPDDAKILWNE 725

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M+EKGC+PNRIT+MA++ GLCKC +P  ALV++  M+EK MKPD +V VALI AF+S+ N
Sbjct: 726 MQEKGCSPNRITYMAIVHGLCKCGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHN 785

Query: 656 PPLAFEVLKE 665
             +AF +LKE
Sbjct: 786 FSMAFNILKE 795



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 143/617 (23%), Positives = 244/617 (39%), Gaps = 109/617 (17%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+      D+++ + L + N  ++  L+    K    D+    L++M   G+  D   
Sbjct: 276 GEVDRTMQFIDRMEDQNLML-NGKTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSI 334

Query: 104 LTPLLQVYCNSGQFDKALSVF------------------------------------NEI 127
              L+   C    F+KA+++F                                     +I
Sbjct: 335 YDVLIGGLCKKRAFEKAMALFFKMKMLGITPDVQILAKLVASSPEERVVIMLLGERPKDI 394

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIE-------RMDDCNI--------RL--NE 170
            D G +   +F+ +L      G+V+  C L++       R D+ +I        +L  N 
Sbjct: 395 NDEGMI--FLFNSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNT 452

Query: 171 KTFCVLIHGFVKKSR---VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            +F ++IHG +K +     D AL LF+ M + G   D  +Y+ +I  LCK+ +L+ + +L
Sbjct: 453 ASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKL 512

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
             +M+ S + P                                      NSI   L    
Sbjct: 513 LRDMEQSRLQPTH---------------------------------FTYNSIFGCLCRRE 539

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
               A  LL+ M +G      G E          P      +++  L K+G+   A +  
Sbjct: 540 DTVGAIELLREM-RGH-----GHE----------PWIKHSTLLVKQLCKNGRAIEASNFL 583

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   G + ++  Y+  +DGL   N+L+ + EL +++   G +P   + N + +  C+ 
Sbjct: 584 ADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKA 643

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V  A N + KMRV G  P      LLI E CK+G   +A   L+ M +E   P I+ Y
Sbjct: 644 GKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISY 703

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G  +  R D A  L+ ++   GC P+ + Y  I+ GLCK  +  EA   ++ M  
Sbjct: 704 TTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKPDEALVYYHSMEE 763

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES-GSPDVITYTTLIDGLCIAGRP 586
           K + P       LI+ +    N   A   L   +EK +   P    Y T+ D +    + 
Sbjct: 764 KEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTDKNYVTIKDAIFKLSKD 823

Query: 587 DDAIMLWNEMEEKGCAP 603
           +   +    + EKG  P
Sbjct: 824 EQTGLEVKALIEKGRIP 840


>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Glycine max]
          Length = 942

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/668 (56%), Positives = 503/668 (75%), Gaps = 3/668 (0%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKRE 59
           +ASILSR+ + +PL+ L + +  S  C  +PGALGFLIRCLG  GL  EA+ LFD+++ +
Sbjct: 107 IASILSRSHQTSPLKTLLKQISDSAPCSFTPGALGFLIRCLGHAGLAREAHHLFDEMRLK 166

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           GLCVPN+Y YNCLLEAL KS  VDL+E RL+EM+ +GW +DK+TLTPLLQ YCN+ +FD+
Sbjct: 167 GLCVPNDYCYNCLLEALSKSGEVDLIEARLEEMKGFGWEFDKFTLTPLLQAYCNARRFDE 226

Query: 120 ALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           AL V+N + + GWVD HV S+L ++FSKWG+VDKA EL+ERM+   +RLNEKTFCVLIHG
Sbjct: 227 ALRVYNVMREKGWVDGHVCSMLALSFSKWGDVDKAFELVERMEGHGMRLNEKTFCVLIHG 286

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           FVK+ RVD+ALQLFD M + GF    +++DV+IGGLC+N     AL L SEMK  G+TPD
Sbjct: 287 FVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLIGGLCRNGDSHRALSLLSEMKEFGVTPD 346

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             I +KLI++  D G +  L++E+    +  T+ L+ N+++   V++G +D+A   L+ M
Sbjct: 347 VGIFTKLISAFPDRGVIAKLLEEVPGGEEERTLVLIYNAVLTCYVNDGLMDEACRFLRMM 406

Query: 300 IKGEPIADVGVE-MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           I+ +   DV ++      K  V PN +SF I+IN LLK+ +LDLALSLF +M Q     +
Sbjct: 407 IQSKASGDVQMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFNDMKQFVDRPS 466

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V +YNNLI+ LC+SNRLEES ELLREM+ESG +PTHFT NS++ CLC+R+DV+GA+++++
Sbjct: 467 VLIYNNLINSLCDSNRLEESRELLREMKESGVEPTHFTYNSIYGCLCKRKDVLGAIDMLK 526

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            MR  GHEPW+K++TLL+KELC HG A+EA  FL  MVQ+GFLPDIV YSAAIGGLI I+
Sbjct: 527 GMRACGHEPWIKNSTLLVKELCDHGMAIEACNFLDSMVQQGFLPDIVSYSAAIGGLIQIQ 586

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ AL+LF D+ + G CPDVVA NI++ GLCKA RV EAE L +E++ KG  PSV TYN
Sbjct: 587 ELNRALQLFSDLYSRGHCPDVVASNILMRGLCKAYRVREAEKLLDEIVVKGFFPSVVTYN 646

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           LLI+ WCK+G++D+AM  LSRM   E   P+VITY+TL+DG C A RPDDA+++WNEME 
Sbjct: 647 LLIDSWCKNGSVDKAMALLSRM-SGEDREPNVITYSTLVDGFCRAERPDDALLVWNEMER 705

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KGC PN+I FMALI GLCKC RP  AL + R M++K MKPD F+++ALIS+FLS+++   
Sbjct: 706 KGCFPNQIAFMALIYGLCKCCRPTTALHYLREMEQKDMKPDSFIYIALISSFLSDMDLAS 765

Query: 659 AFEVLKEM 666
           AFE+ KEM
Sbjct: 766 AFEIFKEM 773



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 226/528 (42%), Gaps = 43/528 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G V+ A  LFD + R G   P +  ++ L+  LC++         L EM+++
Sbjct: 283 LIHGFVKEGRVDRALQLFDIMCRVGFTPPVSL-FDVLIGGLCRNGDSHRALSLLSEMKEF 341

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH---VFSILLVAFSKWGEVD 152
           G   D    T L+  + + G   K L    E +  G  +     +++ +L  +   G +D
Sbjct: 342 GVTPDVGIFTKLISAFPDRGVIAKLL----EEVPGGEEERTLVLIYNAVLTCYVNDGLMD 397

Query: 153 KACELIERMDDCN-----------------IRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           +AC  +  M                     +  N  +F ++I+G +K  ++D AL LF+ 
Sbjct: 398 EACRFLRMMIQSKASGDVQMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFND 457

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +        +Y+ +I  LC + +LE + +L  EMK SG+ P     + +        +
Sbjct: 458 MKQFVDRPSVLIYNNLINSLCDSNRLEESRELLREMKESGVEPTHFTYNSIYGCLCKRKD 517

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRI--LVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           +   +  +   R       + NS + +  L  +G   +A N L +M++            
Sbjct: 518 VLGAIDMLKGMRACGHEPWIKNSTLLVKELCDHGMAIEACNFLDSMVQ------------ 565

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G + P+  S+   I  L++  +L+ AL LF ++   G   +V   N L+ GLC + 
Sbjct: 566 ---QGFL-PDIVSYSAAIGGLIQIQELNRALQLFSDLYSRGHCPDVVASNILMRGLCKAY 621

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R+ E+ +LL E+   GF P+  T N +    C+   V  A+ L+ +M  +  EP V   +
Sbjct: 622 RVREAEKLLDEIVVKGFFPSVVTYNLLIDSWCKNGSVDKAMALLSRMSGEDREPNVITYS 681

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            L+   C+  +  +A     +M ++G  P+ + + A I GL    R   AL   R++   
Sbjct: 682 TLVDGFCRAERPDDALLVWNEMERKGCFPNQIAFMALIYGLCKCCRPTTALHYLREMEQK 741

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
              PD   Y  +IS       +A A ++F EM+  G  P     N  I
Sbjct: 742 DMKPDSFIYIALISSFLSDMDLASAFEIFKEMVYSGYFPESHDKNYSI 789


>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 1430

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/673 (54%), Positives = 492/673 (73%), Gaps = 8/673 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +ASI SR+ +  PL  LA+ +  S C  +PGA  F +RCLG++ LV +AN LFD++ R+G
Sbjct: 96  IASIFSRSHQTQPLIHLAKHLPNSSCSFTPGAFSFFLRCLGNLRLVHQANQLFDEMSRKG 155

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L VP+ YS+N LLE + K   VDL+EMRL EM+ +GW +DKYTLTP++  YCN+ +FD+A
Sbjct: 156 LFVPDRYSHNTLLEVISKCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQRFDQA 215

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           LSV+ E+ + GWVDE V S++ + FSK GEVDKA EL+ERM +C +RL+EKTFCVLIHGF
Sbjct: 216 LSVYKEMEEKGWVDERVCSMMALCFSKLGEVDKAFELVERMGECGMRLSEKTFCVLIHGF 275

Query: 181 VKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           VK+SRVDKALQLFDKM +   F  D ++YDV+IGGLCKNK  + A+ L+SEMK  G+ PD
Sbjct: 276 VKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPD 335

Query: 240 FEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             IL+KLI+  SD   +   LL +    + D  T+ L+ N+++   V++G +D+AY L++
Sbjct: 336 IGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIR 395

Query: 298 AMIKGEPIADVGVEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            MI+ +   D     + +F  TV     PN +SF I+I+  LK+ +LDLALSLF +M + 
Sbjct: 396 MMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRF 455

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
                + +YNNLID LC SNRLE+SYELLREM+E G +PTHFT NS++ CLC+R+DV  A
Sbjct: 456 VDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAA 515

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             ++++M   GH PW+KH TLL+KELC HG+ +EA  FL +M Q+GFLPDIV YSAAIGG
Sbjct: 516 CVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGG 575

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L++I+ VD A+++F+D+ +HG CPDVV +N++I GLCK  R  EAEDLF+E++ +GL PS
Sbjct: 576 LVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPS 635

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TYNL I+ WCK+GN+D+AM  L RM  KE   P V+TYTTL+DG C   RPDDAI+L+
Sbjct: 636 VVTYNLFIDCWCKNGNVDKAMAHLFRM-TKEDKVPSVVTYTTLVDGFCKEERPDDAILLF 694

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EME+ GC PN+ITFMALI GLCKC RP  AL + R M++K MKPD F++VAL+SA+LS+
Sbjct: 695 KEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSD 754

Query: 654 LNPPLAFEVLKEM 666
           LN   AFE+ +EM
Sbjct: 755 LNLTSAFEIFREM 767



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 131/540 (24%), Positives = 233/540 (43%), Gaps = 52/540 (9%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +   FS+  +      L + + + +       F   +        V +A QLFD+M
Sbjct: 92  TFNAIASIFSRSHQTQPLIHLAKHLPNSSCSFTPGAFSFFLRCLGNLRLVHQANQLFDEM 151

Query: 197 TKSG-FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-FEILSKLITSCSDE- 253
           ++ G F  D   ++ ++  + K   +++     +EMKG G   D + +   ++T C+ + 
Sbjct: 152 SRKGLFVPDRYSHNTLLEVISKCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQR 211

Query: 254 -GELTLLVKEI----WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             +   + KE+    W D  V +M  LC S +      G +D+A+ L++ M       + 
Sbjct: 212 FDQALSVYKEMEEKGWVDERVCSMMALCFSKL------GEVDKAFELVERM------GEC 259

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLID 367
           G+ +          +  +F ++I+  +K+ ++D AL LF +M +      +V LY+ LI 
Sbjct: 260 GMRL----------SEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIG 309

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC +   + +  L  EM+E G +P    L  +  C    + +V  L        +  + 
Sbjct: 310 GLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQT 369

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG--------------------FLPDIVCY 467
            V     L+      G   EA+R +  M+Q                        P+I  +
Sbjct: 370 LVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSF 429

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  I G +   ++DLAL LF D+      P ++ YN +I  LCK+ R+ ++ +L  EM  
Sbjct: 430 SIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKE 489

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G+ P+  TYN +    CK  ++  A + L  M     G P +   T L+  LC  GR  
Sbjct: 490 LGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHG-PWIKHTTLLVKELCDHGRVI 548

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A    + M ++G  P+ +++ A I GL        A+  F+ +   G  PD+  F  LI
Sbjct: 549 EACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLI 608



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/575 (23%), Positives = 229/575 (39%), Gaps = 71/575 (12%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S      LI        V++A  LFD+++RE    P+   Y+ L+  LCK+   D    
Sbjct: 263 LSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAIS 322

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQF-DKALSVFNEIIDHGWVDEHVFSILLVAFS 146
              EM+++G   D   LT L+  + +S     + L    E  +       +++ LL  + 
Sbjct: 323 LFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYV 382

Query: 147 KWGEVDKACELIERM-------DDCNIRL-------------NEKTFCVLIHGFVKKSRV 186
             G +D+A  LI  M       D    R+             N  +F ++I GF+K  ++
Sbjct: 383 NDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQL 442

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D AL LF+ M +        +Y+ +I  LCK+ +LE + +L  EMK  G           
Sbjct: 443 DLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELG----------- 491

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                                 +       NSI   L     +  A  +L+ M       
Sbjct: 492 ----------------------IEPTHFTYNSIYGCLCKRKDVSAACVMLKEM------G 523

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
             G            P      +++  L   G++  A      MTQ G + ++  Y+  I
Sbjct: 524 SCGH----------GPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAI 573

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            GL N   ++ + ++ +++   G  P     N + R LC+      A +L  ++  +G  
Sbjct: 574 GGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLS 633

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V    L I   CK+G   +A   L  M +E  +P +V Y+  + G    +R D A+ L
Sbjct: 634 PSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILL 693

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F+++  +GC P+ + +  +I GLCK  R  EA     EM  K + P    Y  L++ +  
Sbjct: 694 FKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLS 753

Query: 547 SGNIDQAMLCLSRMLE-KESGSPDVITYTTLIDGL 580
             N+  A      M++      P    Y T++D +
Sbjct: 754 DLNLTSAFEIFREMVDLGFFPKPLDKNYPTVVDAI 788


>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/575 (61%), Positives = 457/575 (79%), Gaps = 3/575 (0%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M+D G  + KYTLTP+LQVYCN+G+FD+AL+VFNEI DHGW+D +VFSIL+++FSKWG+V
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWLDAYVFSILVLSFSKWGQV 60

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           DK+ E IE+M++ N RLNEKTFC LIHGFVK+SRVDK +QLF KM K G + D ++YDV+
Sbjct: 61  DKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVL 120

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           IGG C NK+L+ AL LY+EMK   I PD  ++SKLI+S  +EG+L  +++E  ED ++ T
Sbjct: 121 IGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIET 180

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            TLLCNS++  LV++G ID+A  LL+ M+      DV  ++    K  + PNT+SF I+I
Sbjct: 181 QTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEK--IRPNTASFSIVI 238

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N L++  KLDLA+ LF++M +IGC +++ LYNNLI+GLCNS+RLEESY+LL+EMEESGFK
Sbjct: 239 NGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFK 298

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           PT FTLNS+F CLC+RQDV GAL+LV+KMR+ G EPWVKH TLL+++LCKHGKA EA  F
Sbjct: 299 PTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIF 358

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           LTDMVQEGF P+I+ YSA +GGLI+++ VD AL+LF+DI A G CPDV+AYNI++ GL +
Sbjct: 359 LTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYE 418

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A R  EA +LFNEM+ KGLIPSV TYNLLI+GWCK+G ID AM CL  M  KE   P+V 
Sbjct: 419 AHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKER-EPNVF 477

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TYTTLIDGLC AGRPDDA+MLWNEM  +GC PNR+ FM  I GLCKCD+P AAL+HF  M
Sbjct: 478 TYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEM 537

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +E+ M+PD +V+++L+SAF++  N P+AFE+LK+M
Sbjct: 538 EEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKM 572



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 139/604 (23%), Positives = 241/604 (39%), Gaps = 99/604 (16%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           ++   ++       L+      G V+++    ++++ +   + N  ++  L+    K   
Sbjct: 36  IQDHGWLDAYVFSILVLSFSKWGQVDKSFEFIEKMEEQNFRL-NEKTFCNLIHGFVKQSR 94

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI------IDHGWVDE 135
           VD       +MQ YG   D      L+  +C++ + DKALS++ E+       D G V +
Sbjct: 95  VDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSK 154

Query: 136 HVFSI----------------------------LLVAFSKWGEVDKACELIERM------ 161
            + S                             +L +    G +DKAC L+  M      
Sbjct: 155 LISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDD 214

Query: 162 --------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
                    D  IR N  +F ++I+G ++  ++D A+ LF  M + G   D  +Y+ +I 
Sbjct: 215 DDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLIN 274

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC + +LE + +L  EM+ SG  P                + TL               
Sbjct: 275 GLCNSDRLEESYKLLKEMEESGFKPT---------------QFTL--------------- 304

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              NSI   L     +  A +L++ M         G E          P    + +++  
Sbjct: 305 ---NSIFGCLCKRQDVSGALDLVKKM------RLYGCE----------PWVKHYTLLVRK 345

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K GK   A     +M Q G   N+  Y+ L+ GL     ++++ +L +++   G  P 
Sbjct: 346 LCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPD 405

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N + + L        A NL  +M ++G  P V    LLI   CK+G   +A   L 
Sbjct: 406 VIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLC 465

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M  +   P++  Y+  I GL    R D A+ L+ ++   GC P+ VA+   I GLCK  
Sbjct: 466 SMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCD 525

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +   A   F+EM  + + P    Y  L++ +    N   A   L +M+++ +  PD +  
Sbjct: 526 KPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRRN-FPDPLDK 584

Query: 574 TTLI 577
             +I
Sbjct: 585 NCII 588


>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
          Length = 1280

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/671 (54%), Positives = 499/671 (74%), Gaps = 7/671 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MASILSRAR+ A L+ L  DV+ SRCFMSPGA GF IRCLG+ GLV+EA+ +FD+V+  G
Sbjct: 112 MASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMG 171

Query: 61  LCVPNNYSYNCLLEALCKS--CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           LCVPN Y+YNCLLEA+ KS   SV+LVE RLKEM+D G+ +DK+TLTP+LQVYCN+G+ +
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +ALSVFNEI+  GW+DEH+ +IL+V+F KWG+VDKA ELIE +++ +IRLN KT+CVLIH
Sbjct: 232 RALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GFVK+SR+DKA QLF+KM + G  +D A+YDV+IGGLCK+K LEMAL LY E+K SGI P
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  IL KL+ S S+E EL+ + + I  D D  ++ LL  S+    + N  + +AY+ +Q 
Sbjct: 352 DRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411

Query: 299 MI---KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++   + + ++++ V++L      + P++ S  I+IN L+K  K+D+A++L  ++ Q G 
Sbjct: 412 LMGNYESDGVSEI-VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGL 470

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           +    +YNN+I+G+C   R EES +LL EM+++G +P+ FTLN ++ CL  R D VGAL+
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD 530

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L++KMR  G EPW+KH T L+K+LC++G+A++A ++L D+  EGFL  +V  +AAI GLI
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             + VD  LELFRDICA+G CPDV+AY+++I  LCKA R  EA+ LFNEM++KGL P+VA
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+GWCK G ID+ + C+ RM E E  +PDVITYT+LI GLC +GRP +AI  WNE
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNE 709

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M+ K C PNRITFMALI GLCKC     ALV+FR M+EK M+PD  V+++L+S+FLS  N
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769

Query: 656 PPLAFEVLKEM 666
               F + +EM
Sbjct: 770 INAGFGIFREM 780



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 281/651 (43%), Gaps = 64/651 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  LF++++R G+   +   Y+ L+  LCK   +++      E++  G   D+  L 
Sbjct: 299 IDKAFQLFEKMRRMGMNA-DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357

Query: 106 PLLQVYCNS-----------GQFDKAL------SVFNEIIDHGWVDEHVFSILLVAFSKW 148
            LL  +              G  DK        S+F   I +  V E  +S +      +
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHE-AYSFIQNLMGNY 416

Query: 149 GEVDKACELIERMDDCN--IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
            E D   E+++ + D N  I  +  +  ++I+  VK ++VD A+ L   + ++G      
Sbjct: 417 -ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM 475

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-FE---ILSKLITSCSDEGELTLLVK- 261
           MY+ II G+CK  + E +L+L  EMK +G+ P  F    I   L   C   G L LL K 
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535

Query: 262 -----EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                E W    +   T L    ++ L  NG    A   L      + +A  G      F
Sbjct: 536 RFYGFEPW----IKHTTFL----VKKLCENGRAVDACKYL------DDVAGEG------F 575

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            G +  +T++ D     L+K+  +D  L LFR++   G   +V  Y+ LI  LC + R  
Sbjct: 576 LGHMVASTAAID----GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+  L  EM   G KPT  T NSM    C+  ++   L+ + +M      P V   T LI
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC  G+  EA     +M  +   P+ + + A I GL        AL  FR++      
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD   Y  ++S    ++ +     +F EM+ KG  P     N ++     S ++D A   
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTS-DVDYAYKF 810

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           LS++       P    +  +I G   +  P+ +I ++ +M   G  P+ +T+  L+    
Sbjct: 811 LSKL-----SDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSS 865

Query: 617 K-CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +R     +H  ++K  G++ D+F+   LI  + S  +   A ++  EM
Sbjct: 866 RLSNRKLGGSLHCSVVKS-GLEWDLFICNTLIHMYGSFRDQASARKLFDEM 915



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 150/696 (21%), Positives = 275/696 (39%), Gaps = 102/696 (14%)

Query: 32   ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +L  +I CL     V+ A  L   + + GL +P    YN ++E +CK    +     L E
Sbjct: 441  SLSIVINCLVKANKVDMAVTLLHDIVQNGL-IPGPMMYNNIIEGMCKEGRSEESLKLLGE 499

Query: 92   MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKW 148
            M+D G    ++TL  +         F  AL +  ++  +G   W+    F  L+    + 
Sbjct: 500  MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCEN 557

Query: 149  GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            G    AC+ ++ +       +       I G +K   VD+ L+LF  +  +G   D   Y
Sbjct: 558  GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617

Query: 209  DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIW 264
             V+I  LCK  +   A  L++EM   G+ P     + +I     EGE    L+ +V+   
Sbjct: 618  HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQA---YNLLQ------------AMIKGEPIADVG 309
            ++++ + +T    S++  L ++G   +A   +N ++            A+I+G       
Sbjct: 678  DEKNPDVITY--TSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735

Query: 310  VEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM-----QNVF 360
             E L+ F+      + P+++ +  ++++ L    ++    +FREM   G       +N  
Sbjct: 736  GEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYM 795

Query: 361  L-------------------------YNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
            L                         +N +I G  NS   E+S  +  +M   G  P H 
Sbjct: 796  LAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHM 855

Query: 396  TLNSMFRCLCR--RQDVVGALN--------------------LVRKMRVQG--------- 424
            T   + +   R   + + G+L+                    +    R Q          
Sbjct: 856  TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 915

Query: 425  -HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             H+  V  N++L     K G  + A R + D + E    D+V +S+ I G +     + A
Sbjct: 916  PHKNLVTWNSIL-DAYAKSGDVVSA-RLVFDEMSE---RDVVTWSSMIDGYVKRGEYNKA 970

Query: 484  LELFRDICAHGCC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            LE+F  +   G    + V    +I        +   + +   ++   L  +V     LI+
Sbjct: 971  LEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLID 1030

Query: 543  GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             + K G+I  A     R   KE+   D + +  +I GL   G   +++ L+++M E    
Sbjct: 1031 MYAKCGSIGDAWSVFYRASVKET---DALMWNAIIGGLASHGFIRESLQLFHKMRESKID 1087

Query: 603  PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            P+ ITF+ L+         + A   F+ +KE G +P
Sbjct: 1088 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 1123



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 128/599 (21%), Positives = 236/599 (39%), Gaps = 76/599 (12%)

Query: 31   GALGFLIRCLGSV-GLVEEANM-----LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
            G LG ++    ++ GL++   +     LF  +   G C P+  +Y+ L++ALCK+C    
Sbjct: 574  GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALCKACRTME 632

Query: 85   VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLV 143
             ++   EM   G      T   ++  +C  G+ D+ LS    +  D    D   ++ L+ 
Sbjct: 633  ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692

Query: 144  AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                 G   +A      M   +   N  TF  LI G  K     +AL  F +M +     
Sbjct: 693  GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752

Query: 204  DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG---------------ITPDFEILSKLIT 248
            D+A+Y  ++     ++ +     ++ EM   G               +T D +   K ++
Sbjct: 753  DSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLS 812

Query: 249  SCSDEGEL--TLLVKEIWEDR-------------------DVNTMTLLCNSIMRILVSNG 287
              SD        +++     R                   D  T   L  S  R+  SN 
Sbjct: 813  KLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRL--SNR 870

Query: 288  SIDQAYN--LLQAMIKGEP-IADVGVEMLMIFKGTVSP----------NTSSFDIIINTL 334
             +  + +  ++++ ++ +  I +  + M   F+   S           N  +++ I++  
Sbjct: 871  KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 930

Query: 335  LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF-KPT 393
             K G +  A  +F EM++    ++V  ++++IDG        ++ E+  +M   G  K  
Sbjct: 931  AKSGDVVSARLVFDEMSE----RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 986

Query: 394  HFTLNSMFRCLCRRQDVVGALN---LVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAF 449
              T+ S+  C C     +GALN    V +  +  H P  V   T LI    K G   +A+
Sbjct: 987  EVTMVSVI-CACAH---LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 1042

Query: 450  R-FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              F    V+E    D + ++A IGGL     +  +L+LF  +      PD + +  +++ 
Sbjct: 1043 SVFYRASVKE---TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 1099

Query: 509  LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
                  V EA   F  +   G  P    Y  +++   ++G +  A   +S M  K +GS
Sbjct: 1100 CSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS 1158



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 47/361 (13%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI   GS      A  LFD++  + L      ++N +L+A  KS  V    +   EM + 
Sbjct: 895  LIHMYGSFRDQASARKLFDEMPHKNLV-----TWNSILDAYAKSGDVVSARLVFDEMSER 949

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW--VDEHVFSILLVAFSKWGEVDK 153
                D  T + ++  Y   G+++KAL +F++++  G    +E     ++ A +  G +++
Sbjct: 950  ----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 1005

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
               +   + D ++ L       LI  + K   +  A  +F + +     +DA M++ IIG
Sbjct: 1006 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK--ETDALMWNAIIG 1063

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW------EDR 267
            GL  +  +  +LQL+ +M+ S I PD      L+ +CS  G    LVKE W      ++ 
Sbjct: 1064 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG----LVKEAWHFFKSLKES 1119

Query: 268  DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 +     ++ +L   G +  A++ +  M                    + P  S  
Sbjct: 1120 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEM-------------------PIKPTGSML 1160

Query: 328  DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
              ++N  +  G L+LA ++ +++ ++         +    GL N   + + +   R M E
Sbjct: 1161 GALLNGCINHGNLELAETVGKKLIELQPHN-----DGRYVGLANVYAINKQFRAARSMRE 1215

Query: 388  S 388
            +
Sbjct: 1216 A 1216



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 38/206 (18%)

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+ AYN + S L +A++ A  + L  +++      S   +   I     +G +D+A    
Sbjct: 105 DMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVF 164

Query: 558 SRMLEKESGSPDVITYTTLIDGL------------------------------------- 580
            R+ E     P+  TY  L++ +                                     
Sbjct: 165 DRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY 224

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C  G+ + A+ ++NE+  +G     I+ + L+   CK  +   A     M++E+ ++ + 
Sbjct: 225 CNTGKSERALSVFNEILSRGWLDEHISTI-LVVSFCKWGQVDKAFELIEMLEERDIRLNY 283

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  LI  F+ E     AF++ ++M
Sbjct: 284 KTYCVLIHGFVKESRIDKAFQLFEKM 309


>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1281

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/671 (54%), Positives = 496/671 (73%), Gaps = 7/671 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MASILSRAR+ A L  L  D++ SRC MSPGALGF IRCLG+ GLVEEA+ +FD+V+  G
Sbjct: 112 MASILSRARQNASLTALVGDILNSRCLMSPGALGFFIRCLGNAGLVEEASSVFDRVREMG 171

Query: 61  LCVPNNYSYNCLLEALCKS--CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           LCVPN Y+YNCLLEA+ KS   SV+LVE RLKEM+D G+ +DK+TLTP+LQVYCN+G+ +
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSE 231

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +ALSVFNEI+  GW+DEH+ +IL+V+F KWG+VDKA ELIE +++ +IRLN KTFCVLIH
Sbjct: 232 RALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIH 291

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GFVK+SR+DKA QLF+KM + G   D A+YDV+IGGLCK+K LEMAL LY E+K SGI P
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  IL KL+ S S+E EL+ + K I  D D  ++ LL  S++   + N  + +AYN +Q 
Sbjct: 352 DRGILGKLLCSFSEESELSRITKVIIGDIDTKSVMLLYKSLLEGFIRNDLVHEAYNFIQN 411

Query: 299 MIKGEPIADVGVEMLMIFKG---TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ G   +D   E++ + K     + P++ S  I+I+ L+K  K+++A++L  ++ Q G 
Sbjct: 412 LM-GNHESDGMSEIVKLLKDQNKAILPDSDSLSIVIDCLVKANKVNMAVTLLHDIVQNGL 470

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + ++ +YNN+I+G+C   R EES +LL EM+++G +P+ +TLN ++ CL  R D  GAL+
Sbjct: 471 IPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALD 530

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L++KMR  G EPW+KH T L+K+LC++GKA++A +++ D+  EGFL  +V Y+AAI GLI
Sbjct: 531 LLKKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRHMVSYTAAIEGLI 590

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             + VD  LELFRD CA+G CPDV+AY+++I  LCKA R  EA++LFNEM++KGL PSVA
Sbjct: 591 RNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSKGLKPSVA 650

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+GWCK G ID+ + C+ RM E E  +PDVITYT+LI GLC + RP +AI  WNE
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASRRPSEAISRWNE 709

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M+ K C PNRITFMALI GLC C     ALV+FR M+EK M+PD  V+++L+S+FLS  N
Sbjct: 710 MKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769

Query: 656 PPLAFEVLKEM 666
               F + +EM
Sbjct: 770 ISAGFGIFREM 780



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 156/644 (24%), Positives = 281/644 (43%), Gaps = 50/644 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  LF++++R G+  P+   Y+ L+  LCK   +++      E++  G   D+  L 
Sbjct: 299 IDKAFQLFEKMRRMGMN-PDIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWG---------------- 149
            LL  +    +  +   V    ID   V   ++  LL  F +                  
Sbjct: 358 KLLCSFSEESELSRITKVIIGDIDTKSV-MLLYKSLLEGFIRNDLVHEAYNFIQNLMGNH 416

Query: 150 EVDKACELIERMDDCN--IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           E D   E+++ + D N  I  +  +  ++I   VK ++V+ A+ L   + ++G      M
Sbjct: 417 ESDGMSEIVKLLKDQNKAILPDSDSLSIVIDCLVKANKVNMAVTLLHDIVQNGLIPSLMM 476

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK----LITSCSDEGELTLLVKEI 263
           Y+ II G+CK  + E +L+L +EMK +G+ P    L+     L   C   G L LL K  
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDLLKKMR 536

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
           +   +       C  +++ L  NG         +A+   + I DV  E  +        +
Sbjct: 537 FYGFEPWIKHTTC--LVKKLCENG---------KAVDACKYIDDVAGEGFL-------RH 578

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+   I  L+++  +D  L LFR+    G   +V  Y+ LI  LC + R  E+  L  
Sbjct: 579 MVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFN 638

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G KP+  T NSM    C+  ++   L+ + +M      P V   T LI  LC   
Sbjct: 639 EMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASR 698

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  EA     +M  +   P+ + + A I GL +      AL  FR++      PD   Y 
Sbjct: 699 RPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVYL 758

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++S    ++ ++    +F EM+ KG  P     N L+     + +++ A     ++L K
Sbjct: 759 SLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLL-AVDATSDVNYAY----KLLSK 813

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK-CDRPR 622
            S  PD   +  +I G   +  P+ +I ++ ++   G +P+ +T+  L+    +  +R  
Sbjct: 814 LSNPPDY-GWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYPFLLKSSSRLSNREI 872

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              +H  ++K  G++ D+F+   LI  + S  +   A ++  EM
Sbjct: 873 GGSLHCSVVK-TGLEWDLFISNTLIHMYGSFRDKASARKLFDEM 915



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 152/700 (21%), Positives = 271/700 (38%), Gaps = 110/700 (15%)

Query: 32   ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +L  +I CL     V  A  L   + + GL +P+   YN ++E +CK    +     L E
Sbjct: 441  SLSIVIDCLVKANKVNMAVTLLHDIVQNGL-IPSLMMYNNIIEGMCKEGRSEESLKLLAE 499

Query: 92   MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKW 148
            M+D G    +YTL  +         F  AL +  ++  +G   W+ +H  + L+    + 
Sbjct: 500  MKDAGVEPSQYTLNCIYGCLAERCDFAGALDLLKKMRFYGFEPWI-KHT-TCLVKKLCEN 557

Query: 149  GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            G+   AC+ I+ +       +  ++   I G ++   VD+ L+LF     +G   D   Y
Sbjct: 558  GKAVDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAY 617

Query: 209  DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIW 264
             V+I  LCK  +   A  L++EM   G+ P     + +I     EGE    L+ +V+ ++
Sbjct: 618  HVLIKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVR-MY 676

Query: 265  EDR---DVNTMTLLCNSIMRILVSNGSIDQAYNL-----------LQAMIKGEPIADVGV 310
            ED    DV T T L + +      + +I +   +             A+I+G        
Sbjct: 677  EDEKNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSS 736

Query: 311  EMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM-----QNVFL 361
            E L+ F+      + P+++ +  ++++ L    +     +FREM   G       +N  L
Sbjct: 737  EALVYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLL 796

Query: 362  -------------------------YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
                                     +N +I G  NS   E+S  +  ++  SGF P H T
Sbjct: 797  AVDATSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMT 856

Query: 397  L-----------------------------------NSMFRCLCRRQDVVGALNLVRKMR 421
                                                N++       +D   A  L  +M 
Sbjct: 857  YPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMP 916

Query: 422  VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             +    W   N++L     K G  + A     +M     + D+V +S+ I G +     +
Sbjct: 917  YKNLVTW---NSIL-DSYAKSGDVVSARLVFDEMT----MRDVVTWSSMIDGYVKSGEYN 968

Query: 482  LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE--DLFNEMITKGLIP-SVATYN 538
             ALE+F  +   G          ++S LC    + E     + +  I    +P +V    
Sbjct: 969  EALEIFDQMMRMGSSK--ANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVILQT 1026

Query: 539  LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
             LI+ + K G+I  A         K++   D + +  +I GL   G   ++++L+++M E
Sbjct: 1027 SLIDMYAKCGSIGDAWGVFCGASVKKT---DALMWNAMIGGLASHGFIRESLLLFHKMRE 1083

Query: 599  KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                P+ ITF+ L+         + A   F  +KE G +P
Sbjct: 1084 SEIDPDEITFLCLLAACSHGGLVKEAWHFFTSLKESGAEP 1123



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 159/766 (20%), Positives = 291/766 (37%), Gaps = 135/766 (17%)

Query: 5    LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            L +A ++     L  D+V++    S      +I  +   G  EE+  L  ++K  G+  P
Sbjct: 449  LVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGV-EP 507

Query: 65   NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQ------- 116
            + Y+ NC+   L + C        LK+M+ YG+  + K+T T L++  C +G+       
Sbjct: 508  SQYTLNCIYGCLAERCDFAGALDLLKKMRFYGFEPWIKHT-TCLVKKLCENGKAVDACKY 566

Query: 117  ----------------------------FDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
                                         D+ L +F +   +G   D   + +L+ A  K
Sbjct: 567  IDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCK 626

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                 +A  L   M    ++ +  T+  +I G+ K+  +D+ L    +M +     D   
Sbjct: 627  ACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT 686

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIW 264
            Y  +I GLC +++   A+  ++EMKG    P+   F  L + + +C    E  +  +E+ 
Sbjct: 687  YTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREM- 745

Query: 265  EDRDVNTMTLLCN----------------SIMRILVSNG----SIDQ------------- 291
            E++++   + +                   I R +V  G    S+D+             
Sbjct: 746  EEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAVDATSDVN 805

Query: 292  -AYNLLQAM-----------IKG-----EPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             AY LL  +           I+G      P   + V  + I +   SP+  ++  ++ + 
Sbjct: 806  YAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRV-YIQILRSGFSPDHMTYPFLLKSS 864

Query: 335  LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
             +    ++  SL   + + G   ++F+ N LI    +      + +L  EM         
Sbjct: 865  SRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNL---- 920

Query: 395  FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
             T NS+     +  DVV A  +  +M ++    W    + +I    K G+  EA      
Sbjct: 921  VTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTW----SSMIDGYVKSGEYNEALEIFDQ 976

Query: 455  MVQEG-------FLPDIVCYSAAIGGLIDIKRV-----DLALELFRDICAHGCCPDVVAY 502
            M++ G        +  ++C  A +G L   K V     D+ L L            V+  
Sbjct: 977  MMRMGSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPL-----------TVILQ 1025

Query: 503  NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
              +I    K   + +A  +F     K        +N +I G    G I +++L   +M E
Sbjct: 1026 TSLIDMYAKCGSIGDAWGVFCGASVKK--TDALMWNAMIGGLASHGFIRESLLLFHKMRE 1083

Query: 563  KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             E   PD IT+  L+      G   +A   +  ++E G  P    +  ++  L      R
Sbjct: 1084 SEI-DPDEITFLCLLAACSHGGLVKEAWHFFTSLKESGAEPKSEHYACMVDVL-----SR 1137

Query: 623  AALVH--FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A LV      + E  +KP   V  AL +  ++  N  LA  V K++
Sbjct: 1138 AGLVKDAHDFISEMLIKPTGSVLGALFNGCINHGNLELAETVGKKL 1183



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 7/235 (2%)

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++ E  + G A   F + +   QEG+  D+  Y+A    L   ++      L  DI    
Sbjct: 79  VLNEFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLTALVGDILNSR 136

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL-IPSVATYNLLINGWCKSGNIDQA 553
           C     A    I  L  A  V EA  +F+ +   GL +P+  TYN L+    KS N    
Sbjct: 137 CLMSPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKS-NSSSV 195

Query: 554 MLCLSRMLE-KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            L  +R+ E ++ G   D  T T ++   C  G+ + A+ ++NE+  +G     I+ + L
Sbjct: 196 ELVEARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSVFNEILSRGWLDEHISTI-L 254

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   CK  +   A     M++E+ ++ +   F  LI  F+ E     AF++ ++M
Sbjct: 255 VVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKM 309


>gi|334187522|ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial; Flags: Precursor
 gi|332003898|gb|AED91281.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 832

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/671 (54%), Positives = 499/671 (74%), Gaps = 7/671 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MASILSRAR+ A L+ L  DV+ SRCFMSPGA GF IRCLG+ GLV+EA+ +FD+V+  G
Sbjct: 112 MASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMG 171

Query: 61  LCVPNNYSYNCLLEALCKS--CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           LCVPN Y+YNCLLEA+ KS   SV+LVE RLKEM+D G+ +DK+TLTP+LQVYCN+G+ +
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +ALSVFNEI+  GW+DEH+ +IL+V+F KWG+VDKA ELIE +++ +IRLN KT+CVLIH
Sbjct: 232 RALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GFVK+SR+DKA QLF+KM + G  +D A+YDV+IGGLCK+K LEMAL LY E+K SGI P
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  IL KL+ S S+E EL+ + + I  D D  ++ LL  S+    + N  + +AY+ +Q 
Sbjct: 352 DRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411

Query: 299 MI---KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++   + + ++++ V++L      + P++ S  I+IN L+K  K+D+A++L  ++ Q G 
Sbjct: 412 LMGNYESDGVSEI-VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGL 470

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           +    +YNN+I+G+C   R EES +LL EM+++G +P+ FTLN ++ CL  R D VGAL+
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD 530

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L++KMR  G EPW+KH T L+K+LC++G+A++A ++L D+  EGFL  +V  +AAI GLI
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             + VD  LELFRDICA+G CPDV+AY+++I  LCKA R  EA+ LFNEM++KGL P+VA
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+GWCK G ID+ + C+ RM E E  +PDVITYT+LI GLC +GRP +AI  WNE
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNE 709

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M+ K C PNRITFMALI GLCKC     ALV+FR M+EK M+PD  V+++L+S+FLS  N
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769

Query: 656 PPLAFEVLKEM 666
               F + +EM
Sbjct: 770 INAGFGIFREM 780



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 225/525 (42%), Gaps = 56/525 (10%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  LF++++R G+   +   Y+ L+  LCK   +++      E++  G   D+  L 
Sbjct: 299 IDKAFQLFEKMRRMGMNA-DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357

Query: 106 PLLQVYCNS-----------GQFDKAL------SVFNEIIDHGWVDEHVFSILLVAFSKW 148
            LL  +              G  DK        S+F   I +  V E  +S +      +
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHE-AYSFIQNLMGNY 416

Query: 149 GEVDKACELIERMDDCN--IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
            E D   E+++ + D N  I  +  +  ++I+  VK ++VD A+ L   + ++G      
Sbjct: 417 -ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM 475

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFE---ILSKLITSCSDEGELTLLVK- 261
           MY+ II G+CK  + E +L+L  EMK +G+ P  F    I   L   C   G L LL K 
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535

Query: 262 -----EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                E W    +   T L    ++ L  NG    A   L      + +A  G      F
Sbjct: 536 RFYGFEPW----IKHTTFL----VKKLCENGRAVDACKYL------DDVAGEG------F 575

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            G +  +T++ D     L+K+  +D  L LFR++   G   +V  Y+ LI  LC + R  
Sbjct: 576 LGHMVASTAAID----GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+  L  EM   G KPT  T NSM    C+  ++   L+ + +M      P V   T LI
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC  G+  EA     +M  +   P+ + + A I GL        AL  FR++      
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           PD   Y  ++S    ++ +     +F EM+ KG  P     N ++
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 38/206 (18%)

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+ AYN + S L +A++ A  + L  +++      S   +   I     +G +D+A    
Sbjct: 105 DMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVF 164

Query: 558 SRMLEKESGSPDVITYTTLIDGL------------------------------------- 580
            R+ E     P+  TY  L++ +                                     
Sbjct: 165 DRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY 224

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C  G+ + A+ ++NE+  +G     I+ + L+   CK  +   A     M++E+ ++ + 
Sbjct: 225 CNTGKSERALSVFNEILSRGWLDEHISTI-LVVSFCKWGQVDKAFELIEMLEERDIRLNY 283

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  LI  F+ E     AF++ ++M
Sbjct: 284 KTYCVLIHGFVKESRIDKAFQLFEKM 309


>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
          Length = 975

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 315/675 (46%), Positives = 437/675 (64%), Gaps = 12/675 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L R +R A L  LA D + +RC M+PGALGFL+RCLG+ GL + A   FD  +   
Sbjct: 110 MASLLPRHQR-AHLDRLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASF 168

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWG-YDKYTLTPLLQVYCNSGQFD 118
            C PN+Y+YNCLL+AL K+   D  + RL+EM    G G  DKYTLT LL+ YCN+G+ D
Sbjct: 169 GCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPD 228

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A  VF  + + GWVDEHV + L+VAFSKWG+VD A EL+  M+   +RL+EKT  VL+H
Sbjct: 229 DANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVH 288

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K+ RVDKA+ +F KM   GF  D AMY V+I GLC+ K +  A++L+ EMK SG+ P
Sbjct: 289 GFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDV---NTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K+I +   EG+  ++   I E+ +     ++  L N ++  LV  G ++ AY L
Sbjct: 349 DVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQL 408

Query: 296 LQAMIKGEPIA--DV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L++M+ G      DV  G  ML I +    PN+ SF+I++  L K  KLD+AL+L ++M 
Sbjct: 409 LRSMVCGGQAVNNDVAGGAHMLHI-REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMI 467

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +GC   + ++N+LI  LCN +RLEE Y +  +M++ G  P+ FT NS+F  +CRR+D  
Sbjct: 468 SLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPK 527

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL+L+R+M+  GH PW+K+ T ++++LC  G+  EA +FL  M+Q GFLPDIV YSAA+
Sbjct: 528 AALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAM 587

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+ +   VD AL LFRDI      PDVVA+NI+I+G  K+ ++ EA+ +  EM+ KGL 
Sbjct: 588 NGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLF 647

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV TYNL+I+  CK+G I++A+  L +M+ +E   P VITYT+LIDG C AGRPD+AI 
Sbjct: 648 PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK-QPTVITYTSLIDGFCSAGRPDEAIK 706

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW EM EKGCAPN I + A I GL KC R   AL +F  M  KG + D F  +  I+  +
Sbjct: 707 LWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLI 766

Query: 652 SELNPPLAFEVLKEM 666
           S   P    E+LKE+
Sbjct: 767 SNGYPMKGCELLKEV 781



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 244/564 (43%), Gaps = 81/564 (14%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S   L  L+      G V++A  +F ++   G  V +   Y+ L+E LC+   +     
Sbjct: 278 LSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVV-DLAMYSVLIEGLCQQKDIARAVK 336

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAF 145
             KEM+  G   D   L  +++ +C  G F       NE  ++      V  ++++L   
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEEL 396

Query: 146 SKWGEVDKACELIERM--------DDC-----------NIRLNEKTFCVLIHGFVKKSRV 186
              GEV+ A +L+  M        +D            + + N  +F +++ G  K  ++
Sbjct: 397 VHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL 456

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFEILSK 245
           D AL L   M   G      M++ +I  LC   +LE    ++++MK  G+TP +F   S 
Sbjct: 457 DMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSL 516

Query: 246 LITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
               C   D      L++E+  +     +   C  +++ L  +G + +A   L  M++  
Sbjct: 517 FYGICRRKDPKAALDLLREMQTNGHPPWIKN-CTEMVQQLCFSGRVTEAVQFLDGMLQ-- 573

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
               +G            P+  ++   +N +   G++D AL LFR+++    + +V  +N
Sbjct: 574 ----IGF----------LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHN 619

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI+G   S++L+E+ +++ EM E G  P+  T N                         
Sbjct: 620 ILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYN------------------------- 654

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
                     L+I   CK G+  +A  +L  MV E   P ++ Y++ I G     R D A
Sbjct: 655 ----------LMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEA 704

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL--I 541
           ++L+ ++   GC P+ +AY   I+GL K  R+  A   F EM+TKG    + T++LL  I
Sbjct: 705 IKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGF--ELDTFSLLYFI 762

Query: 542 NGWCKSGNIDQAMLCLSRMLEKES 565
           N    +G   +    L  +L+K++
Sbjct: 763 NFLISNGYPMKGCELLKEVLQKDT 786


>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
 gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
          Length = 1070

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 315/675 (46%), Positives = 437/675 (64%), Gaps = 12/675 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L R +R A L  LA D + +RC M+PGALGFL+RCLG+ GL + A   FD  +   
Sbjct: 110 MASLLPRHQR-AHLDRLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASF 168

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWG-YDKYTLTPLLQVYCNSGQFD 118
            C PN+Y+YNCLL+AL K+   D  + RL+EM    G G  DKYTLT LL+ YCN+G+ D
Sbjct: 169 GCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPD 228

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A  VF  + + GWVDEHV + L+VAFSKWG+VD A EL+  M+   +RL+EKT  VL+H
Sbjct: 229 DANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVH 288

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K+ RVDKA+ +F KM   GF  D AMY V+I GLC+ K +  A++L+ EMK SG+ P
Sbjct: 289 GFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDV---NTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K+I +   EG+  ++   I E+ +     ++  L N ++  LV  G ++ AY L
Sbjct: 349 DVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQL 408

Query: 296 LQAMIKGEPIA--DV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L++M+ G      DV  G  ML I +    PN+ SF+I++  L K  KLD+AL+L ++M 
Sbjct: 409 LRSMVCGGQAVNNDVAGGAHMLHI-REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMI 467

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +GC   + ++N+LI  LCN +RLEE Y +  +M++ G  P+ FT NS+F  +CRR+D  
Sbjct: 468 SLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPK 527

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL+L+R+M+  GH PW+K+ T ++++LC  G+  EA +FL  M+Q GFLPDIV YSAA+
Sbjct: 528 AALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAM 587

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+ +   VD AL LFRDI      PDVVA+NI+I+G  K+ ++ EA+ +  EM+ KGL 
Sbjct: 588 NGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLF 647

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV TYNL+I+  CK+G I++A+  L +M+ +E   P VITYT+LIDG C AGRPD+AI 
Sbjct: 648 PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK-QPTVITYTSLIDGFCSAGRPDEAIK 706

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW EM EKGCAPN I + A I GL KC R   AL +F  M  KG + D F  +  I+  +
Sbjct: 707 LWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLI 766

Query: 652 SELNPPLAFEVLKEM 666
           S   P    E+LKE+
Sbjct: 767 SNGYPMKGCELLKEV 781



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 246/565 (43%), Gaps = 83/565 (14%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S   L  L+      G V++A  +F ++   G  V +   Y+ L+E LC+   +     
Sbjct: 278 LSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVV-DLAMYSVLIEGLCQQKDIARAVK 336

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH---GWVDEHVFSILLVA 144
             KEM+  G   D   L  +++ +C  G F       NE  ++   G V   +++++L  
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVP-LYNVVLEE 395

Query: 145 FSKWGEVDKACELIERM--------DDC-----------NIRLNEKTFCVLIHGFVKKSR 185
               GEV+ A +L+  M        +D            + + N  +F +++ G  K  +
Sbjct: 396 LVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKK 455

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFEILS 244
           +D AL L   M   G      M++ +I  LC   +LE    ++++MK  G+TP +F   S
Sbjct: 456 LDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNS 515

Query: 245 KLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                C   D      L++E+  +     +   C  +++ L  +G + +A   L  M++ 
Sbjct: 516 LFYGICRRKDPKAALDLLREMQTNGHPPWIKN-CTEMVQQLCFSGRVTEAVQFLDGMLQ- 573

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                +G            P+  ++   +N +   G++D AL LFR+++    + +V  +
Sbjct: 574 -----IGF----------LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAH 618

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI+G   S++L+E+ +++ EM E G  P+  T N                        
Sbjct: 619 NILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYN------------------------ 654

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
                      L+I   CK G+  +A  +L  MV E   P ++ Y++ I G     R D 
Sbjct: 655 -----------LMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDE 703

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL-- 540
           A++L+ ++   GC P+ +AY   I+GL K  R+  A   F EM+TKG    + T++LL  
Sbjct: 704 AIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGF--ELDTFSLLYF 761

Query: 541 INGWCKSGNIDQAMLCLSRMLEKES 565
           IN    +G   +    L  +L+K++
Sbjct: 762 INFLISNGYPMKGCELLKEVLQKDT 786


>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
          Length = 975

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 314/675 (46%), Positives = 437/675 (64%), Gaps = 12/675 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L R +R A L  LA D + +RC M+PGALGFL+RCLG+ GL + A   FD  +   
Sbjct: 110 MASLLPRHQR-AHLDRLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASF 168

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWG-YDKYTLTPLLQVYCNSGQFD 118
            C PN+Y+YNCLL+AL K+   D  + RL+EM    G G  DKYTLT LL+ YCN+G+ D
Sbjct: 169 GCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPD 228

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A  VF  + + GWVDEHV + L+VAFSKWG+VD A EL+  M+   +RL+EKT  VL+H
Sbjct: 229 DANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVH 288

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K+ RVDKA+ +F KM   GF  D AMY V+I GLC+ K +  A++L+ EMK SG+ P
Sbjct: 289 GFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAP 348

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDV---NTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K+I +   EG+  ++   I E+ +     ++  L N ++  LV  G ++ AY L
Sbjct: 349 DVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQL 408

Query: 296 LQAMIKGEPIA--DV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L++M+ G      DV  G  ML I +    PN+ SF+I++  L K  KLD+AL+L ++M 
Sbjct: 409 LRSMVCGGQAVNNDVAGGAHMLHI-REDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMI 467

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +GC   + ++N+LI  LCN +RLEE Y +  +M++ G  P+ FT NS+F  +CRR+   
Sbjct: 468 SLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPK 527

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL+L+R+M+  GH PW+K+ T ++++LC  G+  EA +FL  M+Q GFLPDIV YSAA+
Sbjct: 528 AALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAM 587

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+ +   VD AL LFRDI      PDVVA+NI+I+G  K+ ++ EA+ +  EM+ KGL 
Sbjct: 588 NGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLF 647

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV TYNL+I+  CK+G I++A+  L +M+ +E   P VITYT+LIDG C AGRPD+AI 
Sbjct: 648 PSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEK-QPTVITYTSLIDGFCSAGRPDEAIK 706

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW EM EKGCAPN I + A I GL KC R   AL +F  M  KG + D F  +  I+  +
Sbjct: 707 LWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLI 766

Query: 652 SELNPPLAFEVLKEM 666
           S  +P    E+LKE+
Sbjct: 767 SNGHPMKGCELLKEV 781



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 245/566 (43%), Gaps = 85/566 (15%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S   L  L+      G V++A  +F ++   G  V +   Y+ L+E LC+   +     
Sbjct: 278 LSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVV-DLAMYSVLIEGLCQQKDIARAVK 336

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH---GWVDEHVFSILLVA 144
             KEM+  G   D   L  +++ +C  G F       NE  ++   G V   +++++L  
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVP-LYNVVLEE 395

Query: 145 FSKWGEVDKACELIERM--------DDC-----------NIRLNEKTFCVLIHGFVKKSR 185
               GEV+ A +L+  M        +D            + + N  +F +++ G  K  +
Sbjct: 396 LVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKK 455

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFEILS 244
           +D AL L   M   G      M++ +I  LC   +LE    ++++MK  G+TP +F   S
Sbjct: 456 LDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNS 515

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLL---CNSIMRILVSNGSIDQAYNLLQAMIK 301
                C  +     L  ++  +   N        C  +++ L  +G + +A   L  M++
Sbjct: 516 LFYGICRRKYPKAAL--DLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQ 573

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                 +G            P+  ++   +N +   G++D AL LFR+++    + +V  
Sbjct: 574 ------IGF----------LPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVA 617

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LI+G   S++L+E+ +++ EM E G  P+  T N                       
Sbjct: 618 HNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYN----------------------- 654

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                       L+I   CK G+  +A  +L  MV E   P ++ Y++ I G     R D
Sbjct: 655 ------------LMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPD 702

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL- 540
            A++L+ ++   GC P+ +AY   I+GL K  R+  A   F EM+TKG    + T++LL 
Sbjct: 703 EAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGF--ELDTFSLLY 760

Query: 541 -INGWCKSGNIDQAMLCLSRMLEKES 565
            IN    +G+  +    L  +L+K++
Sbjct: 761 FINFLISNGHPMKGCELLKEVLQKDT 786


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/673 (44%), Positives = 447/673 (66%), Gaps = 12/673 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L   +R A L  LA D + SRC M+PGALGFL+R LG+ GL + A  +FD  K   
Sbjct: 107 MASLLPPHQR-AHLDRLATDALVSRCSMTPGALGFLLRRLGAAGLPDTAARVFDAAKTTL 165

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY--GWGYDKYTLTPLLQVYCNSGQFD 118
            C PN+Y+YNCLL+AL K+   +  E RL+EM         D+YTLT LLQ YCN+G+ +
Sbjct: 166 SCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTCGDESVDRYTLTSLLQCYCNAGRPE 225

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A +V   +    WVDEHV ++L+VA+SKWG+V+ A EL+ RM+  ++R NEKT  VL+H
Sbjct: 226 DASAVLQRMSKRAWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVH 285

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  ++ RVD A+ +F KM   GF+ D AMY V+I GLC   ++  A++L+ +MK   ITP
Sbjct: 286 GLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITP 345

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K+I +   +G+ + +   I E+       +  LL N I+  L+++G ++ AY L
Sbjct: 346 DVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQL 405

Query: 296 LQAMIKGEP-IAD---VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L +M++G+  ++D   VGV + +I +  V PN+ SF+I++  L K  KLDLAL+L ++M 
Sbjct: 406 LSSMVRGDQRVSDDDTVGVHIFVITE-DVKPNSDSFNIVVCGLCKVKKLDLALALTKDMV 464

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +GC   + ++N+LI  LCNS +L+E+YE+  +M++ G KP+ FT NS+   +CRR+D  
Sbjct: 465 GLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTS 524

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A +L+R+MR   H+PW+K+ T ++++LC  G+  EA +FL  M++ GFLPDIV YSAA+
Sbjct: 525 AAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAM 584

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+  +  ++ AL LF DI +    PDVVA+NI+I+G  KA +  EA+++  EM++KG++
Sbjct: 585 NGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGML 644

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV TYNL+I+ WCKSG+ID+A+ C+ +M+++E   P V+TYT+L+DGLC AGRPD+AI+
Sbjct: 645 PSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEK-PPTVVTYTSLLDGLCNAGRPDEAIV 703

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW +M EKGC+PN I + AL+ GLCKC R   A+ ++  MK KG   D+F  + L +  +
Sbjct: 704 LWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLDIFSLLNLTNLLI 763

Query: 652 SELNPPLAFEVLK 664
           ++       E+LK
Sbjct: 764 AQGQASKGCELLK 776



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 169/418 (40%), Gaps = 76/418 (18%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNS 372
           ++ + +++P    F  ++  L   G  D A  +F    T + C  N + YN L+D L  +
Sbjct: 127 LVSRCSMTPGALGF--LLRRLGAAGLPDTAARVFDAAKTTLSCAPNSYTYNCLLDALAKA 184

Query: 373 NRLEESYELLREM-----EESGFKPTHFTLNSMFRCLC---RRQDVVGALNLVRKMRVQG 424
            R E++   L+EM     +ES      +TL S+ +C C   R +D    L  + K     
Sbjct: 185 GRAEDAEARLQEMVVTCGDES---VDRYTLTSLLQCYCNAGRPEDASAVLQRMSK----- 236

Query: 425 HEPWVKHN--TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
              WV  +  T+LI    K GK  +A   L  M      P+    S  + GL    RVD+
Sbjct: 237 -RAWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDV 295

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP---------- 532
           A+ +F  + ++G   D+  Y+++I GLC    + +A  LF +M    + P          
Sbjct: 296 AMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKIIE 355

Query: 533 --------------------------SVATYNLLINGWCKSGNIDQAMLCLSRMLE---- 562
                                     +V  YN++++G    G ++ A   LS M+     
Sbjct: 356 AFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQR 415

Query: 563 --------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                          E   P+  ++  ++ GLC   + D A+ L  +M   GC    + F
Sbjct: 416 VSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMF 475

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LI  LC   +   A   F  MK+ G+KP  F + +L+       +   A ++L+EM
Sbjct: 476 NDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREM 533


>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
 gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 297/673 (44%), Positives = 441/673 (65%), Gaps = 12/673 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L   +R A L  LA + + SRC M+PGALGFL+R LG+ GL + A  +FD  +   
Sbjct: 107 MASLLPPHQR-AHLDRLATEALASRCAMTPGALGFLLRRLGAAGLPDTAARVFDAARTTL 165

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY--GWGYDKYTLTPLLQVYCNSGQFD 118
            C PN+Y+YNCLL+AL K+   +  E RL+EM         D+YTLT LL  YCN+G+ +
Sbjct: 166 SCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPE 225

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A +V   + +  WVDEHV ++L VAFSKWG+V+ A ELI RM+   ++ +EKT  VL+H
Sbjct: 226 DASAVLQRMSERAWVDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVH 285

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF ++ RVD A+ +FDKM   GF+ D AMY V+I GLC   ++  A++LY +MK   +TP
Sbjct: 286 GFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTP 345

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K+I +   +G+ + +   I E+       +  LL N I+  L ++G ++ A  L
Sbjct: 346 DVRLLKKMIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILEGLTNHGEVEAASQL 405

Query: 296 LQAMIKGEPIAD----VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L +M++G         VGV +++I +  V PN+ SF+I++  L K  KLDLAL+L ++M 
Sbjct: 406 LSSMVRGGQRGSDDDTVGVHIVVISE-DVKPNSDSFNIVVCGLCKVKKLDLALALTKDMV 464

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +GC   + ++N+LI  LCNS+RL+E+YE+  +M++   KP+ FT NS+F  +CRR+D  
Sbjct: 465 GLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTS 524

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A +L+R+MR   H+PW+K+ T ++++LC  G+  EA +FL +M++ GFLPDIV YSAA+
Sbjct: 525 AAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAM 584

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+  I   + AL LFRDI +    PDVVA+NI+I+G  KA +  EA+++  EM++KGL 
Sbjct: 585 NGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLF 644

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV TYNL+I+ WCKSG ID+A+ C+ +M+++E   P V+TYT+L+DGLC AGRPD+AI+
Sbjct: 645 PSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEK-PPTVVTYTSLLDGLCNAGRPDEAII 703

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW +M EKGC+PN I + A I GLCKC R   A+ ++  MK K    D+F  + L ++ +
Sbjct: 704 LWCKMSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLI 763

Query: 652 SELNPPLAFEVLK 664
           ++       E+LK
Sbjct: 764 AQGQASKGCELLK 776



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 235/581 (40%), Gaps = 80/581 (13%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L  L+      G V+ A  +FD++   G  V +   Y+ L+E LC    +      
Sbjct: 276 SEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSV-DLAMYSVLIEGLCDGNEMGKAVKL 334

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFS 146
            ++M+      D   L  +++ +C  G F       NE   H      V  ++++L   +
Sbjct: 335 YEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILEGLT 394

Query: 147 KWGEVDKACELIERM---------DDC----------NIRLNEKTFCVLIHGFVKKSRVD 187
             GEV+ A +L+  M         DD           +++ N  +F +++ G  K  ++D
Sbjct: 395 NHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLD 454

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            AL L   M   G      M++ +I  LC + +L+ A +++++MK   + P     + L 
Sbjct: 455 LALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLF 514

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLL--CNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                  + +     + E R  +    +  C  +++ L  +G I +A   L  M+K    
Sbjct: 515 YGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLK---- 570

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
             +G            P+  ++   +N + K G+ + AL LFR+++    + +V  +N L
Sbjct: 571 --LGF----------LPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNIL 618

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I+G   + + +E+ E++ EM   G  P+  T N                           
Sbjct: 619 INGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYN--------------------------- 651

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
                   L+I   CK GK  +A   +  M+ E   P +V Y++ + GL +  R D A+ 
Sbjct: 652 --------LMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAII 703

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L+  +   GC P+ +AY   I+GLCK  R   A + + EM TK     + +   L N   
Sbjct: 704 LWCKMSEKGCSPNEIAYTAFINGLCKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLI 763

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G   +    L  +L+K     DV+           AGRP
Sbjct: 764 AQGQASKGCELLKVVLQK-----DVVHSNHFKMQQLSAGRP 799



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 24/370 (6%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN--NLIDGLCNSNRLE 376
           + +PN+ +++ +++ L K G+ + A +  +EM      ++V  Y   +L++  CN+ R E
Sbjct: 166 SCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPE 225

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++  +L+ M E  +   H  L  +     +   V  A+ L+ +M   G +P  K  T+L+
Sbjct: 226 DASAVLQRMSERAWVDEH-VLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLV 284

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               + G+   A      M   GF  D+  YS  I GL D   +  A++L+ D+      
Sbjct: 285 HGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVT 344

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT--YNLLINGWCKSGNIDQAM 554
           PDV     +I   C+    +      NE     L P  A   YN+++ G    G ++ A 
Sbjct: 345 PDVRLLKKMIEAFCRQGDFSTVGPFINENAVH-LKPGSAVLLYNVILEGLTNHGEVEAAS 403

Query: 555 LCLSRMLE------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
             LS M+                    E   P+  ++  ++ GLC   + D A+ L  +M
Sbjct: 404 QLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDM 463

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
              GC    + F  LI  LC  DR   A   F  MK+  +KP  F + +L        + 
Sbjct: 464 VGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDT 523

Query: 657 PLAFEVLKEM 666
             A ++L+EM
Sbjct: 524 SAAADLLREM 533


>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Brachypodium distachyon]
          Length = 837

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/675 (45%), Positives = 443/675 (65%), Gaps = 12/675 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           MAS+L R  + A L  LA D + + C M+PGALGFL+RCLG+ GL + A ++FD  +   
Sbjct: 110 MASLLPR-HQAAHLDRLAADALAACCPMTPGALGFLLRCLGAAGLPDAALLVFDGARTCL 168

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM--QDYGWGYDKYTLTPLLQVYCNSGQFD 118
            C PN+Y++NCLL+ L K+   D  E RL+EM  +      DKYTLT LLQ YCN+G+ D
Sbjct: 169 SCTPNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGDESVDKYTLTSLLQCYCNAGRPD 228

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A  VF  +   GWVDEHV +IL VAFSKWG+VD A EL+ RM+   +R +EKT  VL+H
Sbjct: 229 DANGVFERMSQRGWVDEHVLTILAVAFSKWGKVDGAVELLGRMELLGMRPSEKTLSVLVH 288

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K+ R+DKA+++FDKM   GF +   MY V+I GLC+ K++  A++L+ EMK   + P
Sbjct: 289 GFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIGKAVKLFEEMKRGEVAP 348

Query: 239 DFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  +L K++ +   EG+     L + E       + +  L N ++   V++G  + AY L
Sbjct: 349 DARLLKKMLEAFCREGDFAIAGLFINENARQLKPSGVIALFNVVLEGFVNHGQAEAAYQL 408

Query: 296 LQAMIKG-EPIAD---VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           L +MI+G + I+D   VG  ++ I +  V PN+ SF+I++  L K  KLD AL+L ++MT
Sbjct: 409 LTSMIRGGQGISDGVTVGAHVVDISE-DVKPNSDSFNIVVCGLCKVKKLDNALALIKDMT 467

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            IGC   + ++N+LI  LC+ +RL+E Y++   M+  G  P+ FT NS+F  +CRR+D  
Sbjct: 468 GIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPN 527

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL+L+R MR  GH PW+K+ T ++++LC  G+  EA +FL +M++ GFLPDIV YSAA+
Sbjct: 528 CALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAM 587

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL     VD AL +FRDI +    PDVVA+NI+I+G   + +++EA+++  EM+ KGL 
Sbjct: 588 NGLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLF 647

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PS+ TYNL+I+ WCKSGNI++A+ CL++M+++E  SP V+TYT+LIDGLC  GRPD+AI 
Sbjct: 648 PSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEE-SPTVVTYTSLIDGLCSTGRPDEAIA 706

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LW++M +KGCAPN+I + A + GLCK  R   AL ++  M  KG + D F  +  I+  +
Sbjct: 707 LWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMMTKGFELDTFSCLYFINFLI 766

Query: 652 SELNPPLAFEVLKEM 666
           S  N     E+LKE+
Sbjct: 767 STGNATKGCELLKEV 781



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 227/532 (42%), Gaps = 48/532 (9%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L  L+        +++A  +FD++   G  V     Y+ L+E LC+   +      
Sbjct: 279 SEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGF-VAGLPMYSVLIEGLCQKKEIGKAVKL 337

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE----IIDHGWVDEHVFSILLVA 144
            +EM+      D   L  +L+ +C  G F  A    NE    +   G +   +F+++L  
Sbjct: 338 FEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFINENARQLKPSGVI--ALFNVVLEG 395

Query: 145 FSKWGEVDKACELIERM--------DDC-----------NIRLNEKTFCVLIHGFVKKSR 185
           F   G+ + A +L+  M        D             +++ N  +F +++ G  K  +
Sbjct: 396 FVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSDSFNIVVCGLCKVKK 455

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFEILS 244
           +D AL L   MT  G      M++ +I  LC   +L+   ++++ MK  G+ P +F   S
Sbjct: 456 LDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKNLGLIPSEFTYNS 515

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLL---CNSIMRILVSNGSIDQAYNLLQAMIK 301
                C  +     L  ++  D   N        C  +++ L  +G I +A   L  M+K
Sbjct: 516 LFYGICRRKDPNCAL--DLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLK 573

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                       M F     P+  ++   +N L K G++D AL +FR+++    + +V  
Sbjct: 574 ------------MGFL----PDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVA 617

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LI+G   S +L E+ E++ EM E G  P+  T N M    C+  ++  A+  + KM 
Sbjct: 618 HNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMI 677

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P V   T LI  LC  G+  EA      M+ +G  P+ + Y+A + GL    RVD
Sbjct: 678 DEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVD 737

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            AL  + ++   G   D  +    I+ L       +  +L  E++ K +  S
Sbjct: 738 TALTYYEEMMTKGFELDTFSCLYFINFLISTGNATKGCELLKEVLQKDITHS 789


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/635 (30%), Positives = 319/635 (50%), Gaps = 51/635 (8%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    ++R L   G   +A + F ++ +   C P++ +YN ++  L KS  +D     L+
Sbjct: 11  GVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMINGLSKSDRLDDAIRLLE 68

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           EM D G+  + ++   +L  +C + + + AL +  +++  G   + V ++ ++    K  
Sbjct: 69  EMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLD 128

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +VD+AC ++++M     + N  T+  L+ GF +   +D A++L  KMT+ G+  +A  Y+
Sbjct: 129 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 188

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            I+ GLC  ++L+ ALQL+ EM+ SG  P                             DV
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPP----------------------------DV 220

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            T + + +S    LV +G +D A  L++AM+                KG  SPN  ++  
Sbjct: 221 FTYSTIVDS----LVKSGKVDDACRLVEAMVS---------------KG-CSPNVVTYSS 260

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ L K GKLD A +L + MT+ GC  N+  YN +IDG C   R++E+Y LL EM + G
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P   T   +    C+      A+ LV  M  +G+ P +     L+   CK  +   A 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L+ M+Q+G +P++V Y+  I GL    +V   + L   + ++ C PD+V +N II  +
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK  RV  A +LFN +   G  P++ TYN L++G CKS   DQA   L  M  K+  SPD
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           +ITY T+IDGLC + R D A  L+ +M   G AP+ +T+  +I+ LCK      A     
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           +M + G  P    +  LI  F    N   A E+L+
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 262/595 (44%), Gaps = 62/595 (10%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           +A R+     L + +V   C     +   +I  L  +  V+EA  + D++ + G C PN 
Sbjct: 91  KANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG-CQPNV 149

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y  L++  C+   +D     +++M + G+  +  T   ++   C+  + D AL +F E
Sbjct: 150 ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKE 209

Query: 127 IIDHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           + + G     VF  S ++ +  K G+VD AC L+E M       N  T+  L+HG  K  
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FE 241
           ++D+A  L  +MT+SG + +   Y+ II G CK  +++ A  L  EM   G  P+   + 
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA--------- 292
           +L      C    +   LV+ + E   V  +    NS++ +      +++A         
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL-FTYNSLLDMFCKKDEVERACQLLSSMIQ 388

Query: 293 ---------YN-----------------LLQAMIKGEPI------------------ADV 308
                    YN                 LL+ M+    +                   D+
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448

Query: 309 GVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLI 366
             E+  +I +   +PN  +++ +++ L K  + D A  L REMT + GC  ++  YN +I
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           DGLC S R++ +Y+L  +M   G  P   T + +   LC+ + +  A N++  M   G +
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P       LI   CK G   +A   L  ++ +G  PD+V +S  I  L    R+  A EL
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
              +   G  PD V YN ++ G C A R  +A DLF  M   G  P  ATY  L+
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 181/387 (46%), Gaps = 71/387 (18%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCN----------------------------------SNRL 375
           M + G   +  ++ +++ GLC+                                  S+RL
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++  LL EM ++GF P  F+ N++    C+   V  AL L+ +M ++G  P V   T +
Sbjct: 61  DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK  +  EA R +  M+Q G  P+++ Y   + G   +  +D A+EL R +   G 
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNE------------------------------- 524
            P+ + YN I+ GLC  +++  A  LF E                               
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240

Query: 525 -----MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
                M++KG  P+V TY+ L++G CK+G +D+A   L RM  +   SP+++TY T+IDG
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCSPNIVTYNTIIDG 299

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C  GR D+A  L  EM + GC PN +T+  L+   CKC +   A+    +M EKG  P+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +F + +L+  F  +     A ++L  M
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSM 386



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 230/496 (46%), Gaps = 54/496 (10%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L + +V   C  SP  + +  L+  L   G ++EA  L  ++ R G C PN  +YN +++
Sbjct: 242 LVEAMVSKGC--SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIID 298

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             CK   +D     L+EM D G   +  T T LL  +C  G+ + A+ +   +++ G+V 
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 358

Query: 135 E-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
               ++ LL  F K  EV++AC+L+  M       N  ++  +I G  K ++V + + L 
Sbjct: 359 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 418

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           ++M  +    D   ++ II  +CK  ++++A +L++ ++ SG TP+      L+T     
Sbjct: 419 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN------LVTY---- 468

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                  NS++  L  +   DQA  LL+ M +            
Sbjct: 469 -----------------------NSLVHGLCKSRRFDQAEYLLREMTR------------ 493

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              K   SP+  +++ +I+ L K  ++D A  LF +M   G   +   Y+ +I  LC   
Sbjct: 494 ---KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++E+  +L  M ++GF P   T  ++    C+  ++  AL +++ +  +G  P V   +
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           + I  L K G+  +A   L  M++ G +PD V Y+  + G  D  R + A++LF  +   
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQC 670

Query: 494 GCCPDVVAYNIIISGL 509
           GC PD   Y  ++  L
Sbjct: 671 GCEPDNATYTTLVGHL 686



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 196/440 (44%), Gaps = 66/440 (15%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A ++     L Q + +S C  +      +I     +G ++EA  L +++  +G C P
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQP 323

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  LL+A CK    +     ++ M + G+  + +T   LL ++C   + ++A  + 
Sbjct: 324 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 383

Query: 125 NEIIDHGWV------------------------------------DEHVFSILLVAFSKW 148
           + +I  G V                                    D   F+ ++ A  K 
Sbjct: 384 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKT 443

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT-KSGFASDAAM 207
             VD A EL   + +     N  T+  L+HG  K  R D+A  L  +MT K G + D   
Sbjct: 444 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 503

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGE--LTLLV 260
           Y+ +I GLCK+K+++ A +L+ +M   G+ PD    S +I+S C     DE    L L++
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           K  ++   +   TL+           G++D+A  +LQ               L++ KG+ 
Sbjct: 564 KNGFDPGAITYGTLIDG-----FCKTGNLDKALEILQ---------------LLLSKGSY 603

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  +F I I+ L K G+L  A  L   M + G + +   YN L+ G C+++R E++ +
Sbjct: 604 -PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662

Query: 381 LLREMEESGFKPTHFTLNSM 400
           L   M + G +P + T  ++
Sbjct: 663 LFEVMRQCGCEPDNATYTTL 682


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 195/605 (32%), Positives = 304/605 (50%), Gaps = 23/605 (3%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N Y+YN L EAL ++  +D     LK     G   + +T   ++Q  C SG  DKA  + 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+ + G V D  +++ ++ A  K     KA +    M+      N  T+ ++I G  K 
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKA 139

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           +R+ +A   F KM K G   +   Y+V+I G CK  ++  A  L  EMK SG+ P+    
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAMIK 301
           S +I     + ++    K   +  +   M  L   N+++  L  NG +D+AY LL  M +
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          +G + P+  S+D ++  L K GK+D+AL +F + +   C  +V  
Sbjct: 260 ---------------RG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ LI GLC + RL+E+ +L  +M E+  +P   T  ++   LC+   +  A  ++  M 
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P V   + LI  LCK G+  +A      M+  G  P++V Y++ I G      VD
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 423

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL L  ++ A GC PD++ YN +I GLCK  R  EA  LF +M  K   P V TY+ LI
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            G+CK   ID A      ML K++  PDV+T++TL++G C AG  DDA  L  EM    C
Sbjct: 484 GGFCKLERIDMARTLFDDML-KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           +P+  T+ +L+ G CK  R   A    + M ++G +P++  + ALI AF     P +A+ 
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 662 VLKEM 666
           +L+EM
Sbjct: 603 LLEEM 607



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 288/591 (48%), Gaps = 23/591 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN ++Y  +++ LCKS  +D     L+EM++ G   D      ++   C +    KAL 
Sbjct: 56  TPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALD 115

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            F  +     V    ++I++    K   + +A     +M       NE T+ VLI+GF K
Sbjct: 116 YFRSMECEKNV--ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V +A  L  +M +SG A +   Y  +I G C+  +++ A +L+ +M  +G  P+   
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233

Query: 243 LSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + L++     G   E   L+ E+ E R +       +++M  L   G ID A  + +  
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRE-RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
             G+                  P+  ++  +I  L K G+LD A  LF +M +  C  +V
Sbjct: 293 SNGD----------------CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDV 336

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +  L+DGLC  +RL+E+ ++L  ME+    P   T +S+   LC+   V  A  + ++
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M V+G EP V     LI   C       A   + +M   G LPDI+ Y+  I GL    R
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              A  LF D+ A  C PDV+ Y+ +I G CK +R+  A  LF++M+ + ++P V T++ 
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST 516

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L+ G+C +G +D A   L  M+  +  SPDV TYT+L+DG C  GR  +A  +   M ++
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDC-SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 575

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GC PN +T+ ALI   C+  +P  A      M   G++P++  + +LI  F
Sbjct: 576 GCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 194/671 (28%), Positives = 319/671 (47%), Gaps = 62/671 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I+ L   G +++A  L ++++  G  VP+   YN ++ ALCK+ +        + M+  
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGP-VPDAAIYNFVIHALCKARNTAKALDYFRSME-- 121

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               +  T T ++   C + +  +A + F ++   G V +E  +++L+  F K  +V +A
Sbjct: 122 -CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++ M +  +  N  T+  +IHGF ++++VD A +LF +M ++G   +   Y+ ++ G
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVNT 271
           LC+N  ++ A +L  EM+  G+ PD      L+      G++ + +K ++ED    D   
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK-VFEDNSNGDCPP 299

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  ++++  L   G +D+A  L + M                 + +  P+  +F  ++
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKM----------------RENSCEPDVVTFTALM 343

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K  +L  A  +   M    C  NV  Y++LIDGLC + ++ ++ E+ + M   G +
Sbjct: 344 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 403

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T NS+    C    V  AL L+ +M   G  P +     LI  LCK G+A EA R 
Sbjct: 404 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             DM  +   PD++ YS  IGG   ++R+D+A  LF D+      PDVV ++ ++ G C 
Sbjct: 464 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 523

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A  V +AE L  EM+     P V TY  L++G+CK G + +A   L RM  K    P+V+
Sbjct: 524 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVV 582

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI------------------- 612
           TYT LID  C AG+P  A  L  EM   G  PN IT+ +LI                   
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642

Query: 613 -----------------TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
                             GLC+  R  AAL     +K+ G  P   ++VALI        
Sbjct: 643 ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKE 702

Query: 656 PPLAFEVLKEM 666
              A EVL+EM
Sbjct: 703 LGKAMEVLEEM 713



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/610 (27%), Positives = 295/610 (48%), Gaps = 21/610 (3%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA   F ++K++G  VPN ++YN L+   CK   V    + LKEM++ G   +  T + +
Sbjct: 144 EATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C   + D A  +F +++++G +   V ++ LL    + G +D+A EL++ M +  +
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           + ++ ++  L+ G  K  ++D AL++F+  +      D   Y  +I GLCK  +L+ A +
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 227 LYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L+ +M+ +   PD    + L+      D  +    V E  EDR+     +  +S++  L 
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +  A  + + MI                +G + PN  +++ +I+       +D AL
Sbjct: 383 KTGQVRDAQEVFKRMI---------------VRG-IEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L  EMT  GC+ ++  YN LIDGLC + R  E+  L  +M+     P   T + +    
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ + +  A  L   M  Q   P V   + L++  C  G   +A R L +MV     PD+
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y++ + G   + R+  A  + + +   GC P+VV Y  +I   C+A +   A  L  E
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P+V TY  LI G+C +G++++A   L R+   E+   D+  Y  ++DGLC  G
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVF 643
           R   A+ L   +++ G  P    ++ALI GLC+     +A  V   M   +  +P+   +
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 726

Query: 644 VALISAFLSE 653
            A+I     E
Sbjct: 727 EAVIQELARE 736



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 247/523 (47%), Gaps = 59/523 (11%)

Query: 184 SRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           S  D AL+ F   +K  GF  +   Y+ +   L + ++++    +       GITP+   
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFT 61

Query: 243 LSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA- 298
            + +I      G+L     L++E+ E   V    +  N ++  L    +  +A +  ++ 
Sbjct: 62  YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIY-NFVIHALCKARNTAKALDYFRSM 120

Query: 299 -----------MIKGEPIADVGVEMLMIF-----KGTV---------------------- 320
                      MI G   A+   E    F     KGTV                      
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180

Query: 321 ------------SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                       +PN  ++  +I+   +  K+D A  LFR+M + GCM N+  YN L+ G
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC +  ++E+YELL EM E G +P  F+ +++   LC+   +  AL +          P 
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V   + LI  LCK G+  EA +    M +    PD+V ++A + GL    R+  A ++  
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +    C P+V+ Y+ +I GLCK  +V +A+++F  MI +G+ P+V TYN LI+G+C + 
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 420

Query: 549 NIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
            +D A+L +  M    +G  PD+ITY TLIDGLC  GR  +A  L+ +M+ K C P+ IT
Sbjct: 421 GVDSALLLMEEM--TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 478

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +  LI G CK +R   A   F  M ++ + PD+  F  L+  +
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 263/558 (47%), Gaps = 27/558 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  LF Q+   G C+PN  +YN LL  LC++  +D     L EM++ G   DK++  
Sbjct: 212 VDTAYKLFRQMVENG-CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 270

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C +G+ D AL VF +  +     + V +S L+    K G +D+AC+L E+M + 
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           +   +  TF  L+ G  K  R+ +A Q+ + M       +   Y  +I GLCK  Q+  A
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390

Query: 225 LQLYSEMKGSGITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            +++  M   GI P+    + LI   C   G +  LL+ E           +  N+++  
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G   +A  L               +M   F    +P+  ++  +I    K  ++D+
Sbjct: 451 LCKTGRAPEANRLFG-------------DMKAKF---CNPDVITYSCLIGGFCKLERIDM 494

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A +LF +M +   + +V  ++ L++G CN+  ++++  LL EM  S   P  +T  S+  
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C+   +V A  ++++M  +G +P V   T LI   C+ GK   A+R L +MV  G  P
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP 614

Query: 463 DIVCYSAAIGGLI---DIKRVDLALE-LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           +++ Y + IGG     D++     LE L RD     C  D+ AY +++ GLC+  R++ A
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILERLERD---ENCKADMFAYRVMMDGLCRTGRMSAA 671

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            +L   +   G  P    Y  LI G C+   + +AM  L  M       P+   Y  +I 
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ 731

Query: 579 GLCIAGRPDDAIMLWNEM 596
            L   GR ++A  L +E+
Sbjct: 732 ELAREGRHEEANALADEL 749



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 180/397 (45%), Gaps = 75/397 (18%)

Query: 341 DLALSLFREMT-QIGCMQNVFLYNNL---------------------------------- 365
           D AL  F   + Q G   NV+ YN L                                  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 366 -IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR------ 418
            I GLC S  L+++ ELL EM ESG  P     N +   LC+ ++   AL+  R      
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 419 --------------------------KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                                     KM+ +G  P      +LI   CK  K   A+  L
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M + G  P++V YS  I G     +VD A +LFR +  +GC P++V YN ++SGLC+ 
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS---PD 569
             + EA +L +EM  +GL P   +Y+ L+ G CK+G ID A+    ++ E  S     PD
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL----KVFEDNSNGDCPPD 300

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+ Y+TLI GLC AGR D+A  L+ +M E  C P+ +TF AL+ GLCK DR + A     
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M+++   P++  + +LI           A EV K M
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 214/699 (30%), Positives = 346/699 (49%), Gaps = 46/699 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV- 63
           L +A  +   R L  D+    C  +      LI  L  VG ++EA  L  ++ R+   V 
Sbjct: 261 LCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320

Query: 64  PNNYSYNCLLEALCK-SCSVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDKA 120
           PN  +YN  L+ LCK S + +  E+ ++ ++D       D  T + L+   C  GQ D+A
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACEL-MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 379

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            SVF+++I  G+V   + ++ L+    K  ++++A  +IE M D  +  +  T+ VL+  
Sbjct: 380 CSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 439

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITP 238
           F K SRVD+AL+L   M   G   +   ++ II GLCK+ +   A Q++ +M    G+ P
Sbjct: 440 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVP 499

Query: 239 DFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           D      LI     T  + + E  L   +   D D        N + ++    G + +A 
Sbjct: 500 DKITYCTLIDGLFRTGRAGQAEALL---DAMPDPDTYAFNCCINGLSKL----GDVSRAL 552

Query: 294 NLLQAMIKGEPIAD-VGVEMLM--------------IFKGTVS----PNTSSFDIIINTL 334
            +   M++ E + D V   +L+              +F+  V+    P+  +F  +I+ L
Sbjct: 553 QVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 612

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+++ A  +   M  +G   NV  YN L+ GLC S R+EE+ + L EM  SG  P  
Sbjct: 613 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  S+   LCR      AL LV +++  G +P      +L+  L K G+  +A   L +
Sbjct: 673 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEE 732

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH---GCCPDVVAYNIIISGLCK 511
           MV +G  PD+V Y+  I  L     ++ A  L  D+ +     C P+VV Y+++I+GLCK
Sbjct: 733 MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK 792

Query: 512 AQRVAEAEDLFNEMITKG--LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES--GS 567
             R+ EA +L  EM+ K   ++P++ TYN  ++G CK   + +A   L R L   S   S
Sbjct: 793 VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE-LMRSLRDGSLRVS 851

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD +T++TLIDGLC  G+ D+A  ++++M   G  PN +T+  L+ GLCK D+   A   
Sbjct: 852 PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAM 911

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M +KG+ PD+  +  L+ AF    +   A E+L  M
Sbjct: 912 IESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 185/626 (29%), Positives = 290/626 (46%), Gaps = 59/626 (9%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI  L   G   +A  L D +       P+ Y++NC +  L K   V         M + 
Sbjct: 507  LIDGLFRTGRAGQAEALLDAMPD-----PDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
                DK T   L+   C +G F++A ++F E++      D   F  L+    K G+V+ A
Sbjct: 562  ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++++ M +  +  N  T+  L+HG  K  R+++A Q  ++M  SG   D+  Y  ++  
Sbjct: 622  RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681

Query: 215  LCKNKQLEMALQLYSEMKGSGITPD---FEIL-SKLITSCSDEGELTLLVKEIWEDRDVN 270
            LC+  + + ALQL SE+K  G  PD   + IL   L  S   E  +T+L + + +    +
Sbjct: 682  LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 271  TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             +T   N+++  L   G +++A  L               +M         PN  ++ ++
Sbjct: 742  VVTY--NTLIDSLCKAGDLEEARRLHG-------------DMSSRVSRCCVPNVVTYSVL 786

Query: 331  INTLLKDGKLDLALSLFREMTQIGC--MQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            IN L K G++D A  L +EM +  C  + N+  YN+ +DGLC  + + E+ EL+R + + 
Sbjct: 787  INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDG 846

Query: 389  GFK--PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
              +  P   T +++   LC+      A N+   M   G+ P V    +L+  LCK  K  
Sbjct: 847  SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906

Query: 447  EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
             A   +  MV +G  PD++ YS  +        VD ALEL   + + GC P+VV +N II
Sbjct: 907  RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966

Query: 507  SGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAML---------- 555
             GLCK+ +  EA  +F++M  K GL P   TY  LI+G  ++G   QA +          
Sbjct: 967  DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDT 1026

Query: 556  ------------------CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                               L RMLE E   PD +T+  LI G C AG  + A  L+ EM 
Sbjct: 1027 YAFNCCINGLSKLGDVSRALHRMLELEL-VPDKVTFNILIAGACKAGNFEQASALFEEMV 1085

Query: 598  EKGCAPNRITFMALITGLCKCDRPRA 623
             K   P+ +TF ALI GLCK  +  A
Sbjct: 1086 AKNLQPDVMTFGALIDGLCKAGQVEA 1111



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 186/647 (28%), Positives = 293/647 (45%), Gaps = 70/647 (10%)

Query: 48   EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
            EA  +FD +  +   VP+  +Y  L++ L ++      E  L  M D     D Y     
Sbjct: 483  EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP----DTYAFNCC 538

Query: 108  LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
            +      G   +AL V+N +++   V + V F+IL+    K G  ++A  L E M   N+
Sbjct: 539  INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 167  RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            + +  TF  LI G  K  +V+ A  + D M   G   +   Y+ ++ GLCK+ ++E A Q
Sbjct: 599  QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 227  LYSEMKGSGITPDFEILSKLI------TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
               EM  SG  PD      L+      +   D  +L   +K    D D  T  +L + + 
Sbjct: 659  FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 281  RILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    +G  +QA  +L+ M+ KG                   P+  +++ +I++L K G 
Sbjct: 719  K----SGQTEQAITVLEEMVGKGH-----------------HPDVVTYNTLIDSLCKAGD 757

Query: 340  LDLALSLFREMTQI---GCMQNVFLYNNLIDGLCNSNRLEESYELLREM--EESGFKPTH 394
            L+ A  L  +M+      C+ NV  Y+ LI+GLC   R++E+ EL++EM  +     P  
Sbjct: 758  LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNI 817

Query: 395  FTLNSMFRCLCRRQDVVGALNLVRKMRVQGH---EPWVKHNTLLIKELCKHGKAMEAFRF 451
             T NS    LC++  +  A  L+R +R  G     P     + LI  LCK G+  EA   
Sbjct: 818  ITYNSFLDGLCKQSMMAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876

Query: 452  LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              DM+  G++P++V Y+  + GL    +++ A  +   +   G  PDV+ Y++++   CK
Sbjct: 877  FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 936

Query: 512  AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            A  V EA +L + M ++G  P+V T+N +I+G CKS    +A      M  K   +PD I
Sbjct: 937  ASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKI 996

Query: 572  TYTTLIDGL--------------------------CIAG--RPDDAIMLWNEMEEKGCAP 603
            TY TLIDGL                          CI G  +  D     + M E    P
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVP 1056

Query: 604  NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +++TF  LI G CK      A   F  M  K ++PD+  F ALI   
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 183/663 (27%), Positives = 295/663 (44%), Gaps = 71/663 (10%)

Query: 55  QVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNS 114
           ++ R+G+  P   +YN ++  LCKS  +       +E+ + G   D  T   L+   C +
Sbjct: 206 EMARDGV-APTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 264

Query: 115 GQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD--------------------- 152
           G  ++A  +  ++     V   V +S+L+    K G +D                     
Sbjct: 265 GDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 324

Query: 153 ----------------KACELIERMDDCNIRLNEK--TFCVLIHGFVKKSRVDKALQLFD 194
                           +ACEL+  + D ++R++    TF  LI G  K  ++D+A  +FD
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TS 249
            M   G+  +   Y+ ++ GLCK  ++E A  +   M   G+TPD    S L+      S
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
             DE  L LL          N +T   NSI+  L  +    +A+ +   M     +    
Sbjct: 445 RVDEA-LELLHGMASRGCTPNVVTF--NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501

Query: 310 VEMLMIFKGTV----------------SPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +    +  G                   P+T +F+  IN L K G +  AL ++  M ++
Sbjct: 502 ITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
             + +   +N LI G C +   E++  L  EM     +P   T  ++   LC+   V  A
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            +++  M   G  P V     L+  LCK G+  EA +FL +MV  G +PD + Y + +  
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L    R D AL+L  ++ + G  PD V YNI++ GL K+ +  +A  +  EM+ KG  P 
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIM 591
           V TYN LI+  CK+G++++A      M  + S    P+V+TY+ LI+GLC  GR D+A  
Sbjct: 742 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARE 801

Query: 592 LWNEMEEKGCA--PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK--PDMFVFVALI 647
           L  EM  K C   PN IT+ + + GLCK      A    R +++  ++  PD   F  LI
Sbjct: 802 LIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 648 SAF 650
              
Sbjct: 862 DGL 864



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 182/642 (28%), Positives = 286/642 (44%), Gaps = 62/642 (9%)

Query: 67  YSYNCLLEALCKSCS----VDLVEMRLKEMQDYGWGYDKYTLTPLLQ-VYCNSGQFDKAL 121
           +S+N  L  L KS S    +DL   RL          + +T + LL+  Y   G  ++ L
Sbjct: 112 FSFNKYLNLLVKSGSPAKAIDLFRSRLPPR----CRPNHFTYSTLLRATYKAGGDVERTL 167

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE-RMDDCNIRLNEKTFCVLIHGF 180
             F  I          ++I+L +  + GE  +A E+    M    +     T+  +I+G 
Sbjct: 168 GFFRRIRSSSRSVAD-YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K + +   ++LF+++ + G   D   Y+ +I  LCK   LE A +L+ +M      P+ 
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286

Query: 241 EILSKLITSCSDEG---ELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              S LI      G   E   L++E+     DV    +  NS +  L       +A  L+
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 346

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +++  G                 VSP+T +F  +I+ L K G++D A S+F +M   G +
Sbjct: 347 RSLRDGSL--------------RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  YN L++GLC ++++E ++ ++  M + G  P   T + +    C+   V  AL L
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLPDIVCYSAAIGGLI 475
           +  M  +G  P V     +I  LCK  ++ EAF+   DM ++ G +PD + Y   I GL 
Sbjct: 453 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLF 512

Query: 476 DIKRVDLALELF-----RDICAHGCC--------------------------PDVVAYNI 504
              R   A  L       D  A  CC                          PD V +NI
Sbjct: 513 RTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNI 572

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+G CKA    +A  LF EM+ K L P V T+  LI+G CK+G ++ A   L  ++   
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNL 631

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+V+TY  L+ GLC +GR ++A     EM   GC P+ IT+ +L+  LC+  R   A
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L     +K  G  PD   +  L+           A  VL+EM
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 180/391 (46%), Gaps = 47/391 (12%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRL 375
           KG + P+ ++   I+  L  DG  +L    +     + G    +F +N  ++ L  S   
Sbjct: 72  KGRLHPSVAA--AILAQL--DGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSP 127

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQ-DVVGALNLVRKMRVQGHEPWVKHNTL 434
            ++ +L R       +P HFT +++ R   +   DV   L   R++R       V    +
Sbjct: 128 AKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS--VADYNI 185

Query: 435 LIKELCKHGKAMEAFR-FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +++ LC+ G+   A   F  +M ++G  P IV Y+  I GL     +   +ELF ++   
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PDVV YN +I  LCKA  + EA  L  +M ++  +P+V TY++LING CK G ID+A
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 554 MLCLSRMLEKESG--------------------------------------SPDVITYTT 575
              +  M  K                                         SPD +T++T
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LIDGLC  G+ D+A  ++++M   G  PN IT+ AL+ GLCK D+   A      M +KG
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + PD+  +  L+ AF        A E+L  M
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGM 456



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 142/584 (24%), Positives = 242/584 (41%), Gaps = 104/584 (17%)

Query: 37   IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
            I  L  +G V  A  +++++    L VP+  ++N L+   CK+ + +      +EM    
Sbjct: 539  INGLSKLGDVSRALQVYNRMLELEL-VPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 597

Query: 97   WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
               D  T   L+   C +GQ + A  + + + + G     V ++ L+    K G +++AC
Sbjct: 598  LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 657

Query: 156  ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            + +E M       +  T+  L++   + SR D ALQL  ++   G+  D   Y++++ GL
Sbjct: 658  QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 717

Query: 216  CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--------- 266
             K+ Q E A+ +  EM G G  PD    + LI S    G+L    + +  D         
Sbjct: 718  WKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEE-ARRLHGDMSSRVSRCC 776

Query: 267  -RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI---------------------KGEP 304
              +V T ++L N + ++    G ID+A  L+Q M+                     K   
Sbjct: 777  VPNVVTYSVLINGLCKV----GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSM 832

Query: 305  IADVGVEMLMIFKGT--VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
            +A+    M  +  G+  VSP+T +F  +I+ L K G+ D A ++F +M   G + NV  Y
Sbjct: 833  MAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTY 892

Query: 363  NNLIDGLCNSNRLE-----------------------------------ESYELLREMEE 387
            N L++GLC ++++E                                   E+ ELL  M  
Sbjct: 893  NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS 952

Query: 388  SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEP----------------WVK 430
             G  P   T NS+   LC+      A  +   M ++ G  P                W  
Sbjct: 953  RGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAG 1012

Query: 431  HNTLLIKEL----------CKHG--KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
               +L+  +          C +G  K  +  R L  M++   +PD V ++  I G     
Sbjct: 1013 QAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAG 1072

Query: 479  RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
              + A  LF ++ A    PDV+ +  +I GLCKA +V    D+ 
Sbjct: 1073 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 176/371 (47%), Gaps = 39/371 (10%)

Query: 24   SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSC 80
            SRC + P  + +  LI  L  VG ++EA  L  ++ R+   V PN  +YN  L+ LCK  
Sbjct: 773  SRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS 831

Query: 81   SVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
             +      ++ ++D       D  T + L+   C  GQ D+A +VF+++I  G+V   V 
Sbjct: 832  MMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVT 891

Query: 138  FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            +++L+    K  ++++A  +IE M D  +  +  T+ VL+  F K S VD+AL+L   M 
Sbjct: 892  YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951

Query: 198  KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILSKLI-----TSCS 251
              G   +   ++ II GLCK+ Q   A Q++ +M    G+ PD      LI     T  +
Sbjct: 952  SRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWA 1011

Query: 252  DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
             + E+ L   +   D D        N + ++    G + +A   L  M++ E +      
Sbjct: 1012 GQAEVLL---DAMPDPDTYAFNCCINGLSKL----GDVSRA---LHRMLELELV------ 1055

Query: 312  MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                      P+  +F+I+I    K G  + A +LF EM       +V  +  LIDGLC 
Sbjct: 1056 ----------PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 1105

Query: 372  SNRLEESYELL 382
            + ++E +++++
Sbjct: 1106 AGQVEATWDIM 1116


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 191/618 (30%), Positives = 297/618 (48%), Gaps = 67/618 (10%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           V N+ +YN ++ ALCK+  VD      + M +        +L  +L    +SG+ D+AL 
Sbjct: 142 VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQ 201

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           V+ E      +     ++LL  F   G+VDKA EL+  M D     +E ++C ++ G  K
Sbjct: 202 VYRENRREPCL--VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCK 259

Query: 183 KSRVDKALQLFDKMTKSGFASDAAM------YDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
             RV++A++LF        +S ++       Y+++I GLC+N +++ A+Q++ +M    +
Sbjct: 260 AGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNV 319

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +PD      LI                                   L   G ++ A NL 
Sbjct: 320 SPDSWSYGILIDG---------------------------------LAKAGKLNDARNLF 346

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           Q ++                   V+P+T ++  +I+ L      D A  LF +M + GC 
Sbjct: 347 QKLLHS----------------GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   YN +ID  C    LEE+ +L+++M E G  P   T N++   LC+   V  AL L
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450

Query: 417 VRKMRVQGHEPWVK-HNTLL--------IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +M   G  P  + HNT++        I + C+ GK  EAFR L  M  +G +PD+V Y
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  I GL  I RVD A  L  D+    C P VV  N +I GLCKA R+ EA ++ + M++
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 570

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  P V TYN L++G C++G  ++A   LS M+ +   +P+V+TYT L+ GLC A R  
Sbjct: 571 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLP 629

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  ++ +M+  GCAPN  T+ ALI G C   +    L  F  M   G+ PD  V+  L 
Sbjct: 630 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 689

Query: 648 SAFLSELNPPLAFEVLKE 665
           +          A E+L+E
Sbjct: 690 AELCKSGRSARALEILRE 707



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 182/630 (28%), Positives = 300/630 (47%), Gaps = 42/630 (6%)

Query: 55  QVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNS 114
           QV  +  C P+++++  +L  LCK+  +D  E+ + EM+         T + L    C  
Sbjct: 68  QVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLR 127

Query: 115 GQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           G  ++A  +  EI+     +   ++I++VA  K   VD A EL   M +  I L   +  
Sbjct: 128 GSMERAFQLL-EIMP--VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLD 184

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            ++ G +   R+D+ALQ++ +  +          +V++ G C   Q++ A +L   M   
Sbjct: 185 SVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARELLRAMPDE 241

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---------NSIMRILVS 285
              PD      ++      G +   V+ ++ DR++ + +            N ++  L  
Sbjct: 242 ECAPDEVSYCTVLDGLCKAGRVEEAVR-LFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ 300

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           N  ID+A  + + M                 +  VSP++ S+ I+I+ L K GKL+ A +
Sbjct: 301 NDRIDEAVQMFEKM----------------NERNVSPDSWSYGILIDGLAKAGKLNDARN 344

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF+++   G   +   Y +LI GLC +N  +++ EL  +M   G  P+  T N M    C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +R  +  A +L++KM   GH P V     ++  LCK  +  EA     +M + G  P+  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 466 CYSAAIGGLIDIKRVDLA---------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            ++  I GL    ++D A           L + +   G  PDVV Y+ +ISGLC   RV 
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A  L  +M+ +   P+V T N LI+G CK+G I +A   L  M+     SPDV+TY TL
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS-GQSPDVVTYNTL 583

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C AG+ + A  L ++M  +G APN +T+ AL++GLCK +R   A   F  MK  G 
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            P++F + ALI  F S        ++  EM
Sbjct: 644 APNLFTYTALILGFCSAGQVDGGLKLFGEM 673



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 170/635 (26%), Positives = 288/635 (45%), Gaps = 45/635 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A R+     LA+ + + R  ++ G+L  ++  L   G ++EA  ++ + +RE    P
Sbjct: 155 LCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE----P 210

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              + N LLE  C    VD     L+ M D     D+ +   +L   C +G+ ++A+ +F
Sbjct: 211 CLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF 270

Query: 125 NE-------IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            +                  ++I+++   +   +D+A ++ E+M++ N+  +  ++ +LI
Sbjct: 271 GDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILI 330

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K  +++ A  LF K+  SG       Y  +I GLC     + A +L+++M   G  
Sbjct: 331 DGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390

Query: 238 PDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           P     + +I +    G   E   L+K++ ED  V  +    N++M  L  +  +++A  
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY-NTVMDGLCKSSRVEEALL 449

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD---------GKLDLALS 345
           L   M           E L       +PN  S + II  L +          GKLD A  
Sbjct: 450 LFNEM-----------ERL-----GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L + MT  G + +V  Y+ LI GLC+  R++++  LL +M +   KPT  T N++   LC
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   +  A  ++  M   G  P V     L+   C+ G+   A   L+DMV  G  P++V
Sbjct: 554 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A + GL    R+  A  +F  + + GC P++  Y  +I G C A +V     LF EM
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCL---SRMLEKESGSPDVITYTTLIDGLCI 582
           +  G+ P    Y  L    CKSG   +A+  L      L  E+   +V  Y   +DGL  
Sbjct: 674 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLE 731

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           AG+ + A+    +M   G  P      +L+ GLCK
Sbjct: 732 AGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 766



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 252/546 (46%), Gaps = 40/546 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +F+ ++  +   G   +A ++   M++C+    +  + VLI    K+   +   ++   M
Sbjct: 12  LFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPD-VYNVLIDSLSKRQETEAVKKMVQVM 70

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   D+  +  I+ GLCK  +++ A  +  EM+   I P F   S L       G +
Sbjct: 71  VDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSM 130

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                    +R    + ++        V+N S   AYN++   +      D  +E+    
Sbjct: 131 ---------ERAFQLLEIM-------PVANSS---AYNIVVVALCKAARVDDALELARTM 171

Query: 317 KGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                P    S D ++  L+  G++D AL ++RE  +  C+  +   N L++G C+  ++
Sbjct: 172 SEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTL---NVLLEGFCSRGQV 228

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV------VGALNLVRKMRVQGHEPWV 429
           +++ ELLR M +    P   +  ++   LC+   V       G   L          P +
Sbjct: 229 DKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSL 288

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
           +   ++I  LC++ +  EA +    M +    PD   Y   I GL    +++ A  LF+ 
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P  VAY  +I GLC A    +A +LF +M  +G  PS  TYN++I+  CK G 
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +++A   + +M+E +   PDV+TY T++DGLC + R ++A++L+NEME  GC PNR +  
Sbjct: 409 LEEACDLIKKMIE-DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467

Query: 610 ALITGLCK-------CDRPR--AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
            +I GLC+       C R +   A    + M + G  PD+  +  LIS   S      A 
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527

Query: 661 EVLKEM 666
            +L++M
Sbjct: 528 HLLEDM 533



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 228/498 (45%), Gaps = 37/498 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +F+++    +  P+++SY  L++ L K+  ++      +++   G        T
Sbjct: 304 IDEAVQMFEKMNERNVS-PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C +  FD A  +F ++   G     V +++++ A  K G +++AC+LI++M + 
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  T+  ++ G  K SRV++AL LF++M + G   +   ++ II GLC+  +++ A
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 225 LQ---------LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTM 272
            Q         L   M   G  PD    S LI+       +    + + ED   R     
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD-ARHLLEDMVKRQCKPT 541

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +  N+++  L   G I +A  +L AM+                    SP+  +++ +++
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSS----------------GQSPDVVTYNTLVH 585

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              + G+ + A  L  +M   G   NV  Y  L+ GLC +NRL E+  +  +M+ SG  P
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             FT  ++    C    V G L L  +M   G  P       L  ELCK G++  A   L
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705

Query: 453 TD----MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            +    +  E +  ++  Y  A+ GL++  ++++AL   RD+   G  P       +++G
Sbjct: 706 REGRESLRSEAWGDEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAG 763

Query: 509 LCKAQRVAEAEDLFNEMI 526
           LCK+ +  EA  +  E++
Sbjct: 764 LCKSGQGGEARAVLEEIM 781



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 48/341 (14%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE---------------------- 387
           M Q G      L+ ++I G CN  R  E+ ++   MEE                      
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 388 ------------SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
                        G  P  FT  ++   LC+   +  A  ++ +MR +   P+   ++ L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
             ELC  G    AF+ L  M     + +   Y+  +  L    RVD ALEL R +     
Sbjct: 121 AHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
                + + ++ GL  + R+ EA  ++ E   +   P + T N+L+ G+C  G +D+A  
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARE 233

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL---- 611
            L R +  E  +PD ++Y T++DGLC AGR ++A+ L+ + E    + +  +  +L    
Sbjct: 234 LL-RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYN 292

Query: 612 --ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             I GLC+ DR   A+  F  M E+ + PD + +  LI   
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 293/606 (48%), Gaps = 61/606 (10%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           + ++D++ R  +  P+ Y+   LL +L KS  ++     ++++   G   D  T    + 
Sbjct: 2   HTVYDKLVR--IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYIS 58

Query: 110 VYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
             C + +   A +VF+ +  HG W +   ++ LL      G +  A  L ERM       
Sbjct: 59  GLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSP 118

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T+  L+HGF K  ++D+AL++FD   K GF  D   Y+ +I G CK  +L+ A ++ 
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M    + PD                                  +  NS++  L  NG 
Sbjct: 179 QRMVSESLVPD---------------------------------VVTYNSLVNGLCKNGR 205

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD-GKLDLALSLF 347
           +D+A                   ML++ KG  SPN  ++  +I+ L ++  +L+ A  L 
Sbjct: 206 VDEA------------------RMLIVDKG-FSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   GC  ++  YN LI GL     + E+ +L   +   G++P   T N +   L + 
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V  A  L   +   G EP     T+ I  LCK G+  +A   L DM ++G +PD+V +
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I GL   KRVD A  L   + A GC P+ +++N +I G C+A +  +A   F EM+ 
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 528 KGLIPSVATYNLLINGWCKS---GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +G+ P+V TYN+L++G CK+   G I +A+     M+EK    PDV+TY+ LIDGL  AG
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR-VPDVVTYSALIDGLGKAG 485

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + DDA  L   ME KGC PN  T+ +LI+GLC  D+   AL  F  M EKG  PD   + 
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545

Query: 645 ALISAF 650
            +ISA 
Sbjct: 546 TIISAL 551



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 298/603 (49%), Gaps = 38/603 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+L   +     R + Q +VK  C +S       I  L     + +A  +FD +++ G
Sbjct: 23  LRSLLKSGKIEKAHRFVEQLLVKGLCDIS--TFNIYISGLCRASRIGDAQTVFDGMRKHG 80

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
              PN  +YN LL  LC    +   +   + M   G+  D  T   LL  +C  G+ D+A
Sbjct: 81  FW-PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L +F+  +  G+V + V ++ L+  F K  ++D+A  +++RM   ++  +  T+  L++G
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN-KQLEMALQLYSEMKGSGITP 238
             K  RVD+A  L   +   GF+ +   Y  +I GLC+  ++LE A QL  +M  +G  P
Sbjct: 200 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQA 292
           D    + LI   + E  ++  +K          + +V T  +L + +++       +++A
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK----EDRVNEA 312

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L   ++K       G+E          P+  ++ + I+ L K G+++ AL + ++M +
Sbjct: 313 FELFSGLVKH------GLE----------PDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC+ +V  +N +I+GLC   R++E+  LL  ME  G  P   + N++    CR      
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           A+   ++M  +G +P V    +L+  LCK    G+  EA      M+++G +PD+V YSA
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL    ++D A  L   + A GC P+V  YN +ISGLC   +V EA +LF  M+ KG
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            +P   TY  +I+  CK   +D+A+      LE     P    Y +LIDGLC   R D+A
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV-VPTSGMYFSLIDGLCAVARVDEA 595

Query: 590 IML 592
           + L
Sbjct: 596 LKL 598



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 6/347 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+  +  I++ +LLK GK++ A   F E   +  + ++  +N  I GLC ++R+ ++  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKA-HRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +   M + GF P   T N++   LC    +  A  L  +M   G+ P V     L+   C
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K GK  EA +     V+ GF+PD+V Y+A I G     ++D A  + + + +    PDVV
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS-GNIDQAMLCLSR 559
            YN +++GLCK  RV EA  L   ++ KG  P+V TY+ LI+G C+    ++ A   L +
Sbjct: 192 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+      PD+++Y  LI GL       +A+ L+  +  +G  P   T+  LI GL K D
Sbjct: 249 MV-LNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A   F  + + G++PD   +   I           A  +LK+M
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 237/514 (46%), Gaps = 34/514 (6%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           S L    R++  + L + ++K+    SP  + +  L+     VG ++EA  +FD   + G
Sbjct: 93  SGLCNGGRMSDAQALYERMIKAG--YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRG 150

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             VP+  +YN L+   CK+  +D  +  L+ M       D  T   L+   C +G+ D+A
Sbjct: 151 F-VPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSK-WGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
             +   I+D G+    + +S L+    +    ++ A +L+E+M     + +  ++  LIH
Sbjct: 210 RML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIH 266

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  ++  V +AL+LF  + + G+  +   Y+++I GL K  ++  A +L+S +   G+ P
Sbjct: 267 GLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEP 326

Query: 239 DFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    +  I      G  E  LL+ +  +++      +  N+++  L     +D+A  LL
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386

Query: 297 QAM-IKGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLK- 336
             M  KG     +    L+                  + K  V P   +++I+++ L K 
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 446

Query: 337 --DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
             +G++  A++LF  M + G + +V  Y+ LIDGL  + +L+++  LL  ME  G  P  
Sbjct: 447 RQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 506

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T NS+   LC    V  AL L   M  +G  P       +I  LCK     +A      
Sbjct: 507 YTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDG 566

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            ++ G +P    Y + I GL  + RVD AL+L +
Sbjct: 567 SLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 177/620 (28%), Positives = 302/620 (48%), Gaps = 51/620 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            +EA  LF    R GLC P++ +Y+ L+   CK+         L EM+  G         
Sbjct: 148 AQEAYDLFKN-HRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 206

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            +++  C++G+ D AL  + ++  +       ++IL+ A  K   +  A  ++E M +  
Sbjct: 207 TIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  T+  LI+GF K   +D+A+ LF++M ++  + D   Y+++I G CK ++ +   
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +L  EM   G  P+F                                 +  N++M  LV 
Sbjct: 327 KLLQEMVKYGCEPNF---------------------------------ITYNTLMDSLVK 353

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +G    A+NL Q M++ +                  P+  +F+++I+   K G+LDLA  
Sbjct: 354 SGKYIDAFNLAQMMLRRD----------------CKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF+ MT  GC+ +++ YN +I G C +NR++++ +LL  M E+G  P   T NS+   LC
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A  +   +R  G+   V   + LI  LCK  +  +A + L +M + G  PD+V
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I G     ++D +L  F ++   GC P V+ Y+I+I  LCK+ RV +   L   M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           + +G+ P    Y  +I+G CKS + D+A   L +++++   +P V+TY  L+D LC   R
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYE-LYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+AI L   ME  GC P+ +T+ ++  G  K      A   F+ MK +G  P  F++  
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696

Query: 646 LISAFLSELNPPLAFEVLKE 665
           L++  ++E     A E+ +E
Sbjct: 697 LLTKLVAEEKMDQAMEIWEE 716



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/578 (29%), Positives = 282/578 (48%), Gaps = 35/578 (6%)

Query: 117 FDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
            DKA+  F+            F+   LL AF +  +  +A +L +         +  T+ 
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-- 232
            LI+GF K     +A +L D+M K G     A+Y+ II GLC N +++ AL  Y +M+  
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231

Query: 233 --GSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNG 287
              S IT  + IL   +   +   + +L+++++ E     +V T   L N   ++    G
Sbjct: 232 CAPSVIT--YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL----G 285

Query: 288 SIDQAYNLLQAMIKGEPIADV------------------GVEMLM-IFKGTVSPNTSSFD 328
           ++D+A  L   M++     DV                  G ++L  + K    PN  +++
Sbjct: 286 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++++L+K GK   A +L + M +  C  + F +N +ID  C   +L+ +YEL + M + 
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P  +T N M    CR   +  A  L+ +M   G  P V     ++  LCK  +  EA
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           +     +   G+  D+V  S  I GL   +R+D A +L R++  +G  PDVVAY I+I G
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CKA ++ ++   F+EM+ KG +P+V TY+++I+  CKS  +    + L  MLE+   +P
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER-GVTP 584

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D I YT++IDGLC +   D+A  L+  M++ GCAP  +T+  L+  LCK  R   A+   
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLL 644

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +M+  G  PD   + ++   F        AF + + M
Sbjct: 645 EVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAM 682



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 243/530 (45%), Gaps = 51/530 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +   L ++ RI+   ++ +D++++ C  +      LI     +G ++EA +LF+Q+  E 
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM-LEN 300

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+ ++YN L++  CK          L+EM  YG   +  T   L+     SG++  A
Sbjct: 301 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 360

Query: 121 LSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            ++   ++       H  F++++  F K G++D A EL + M D     +  T+ ++I G
Sbjct: 361 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 420

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + +R+D A QL ++MT++G   D   Y+ I+ GLCK  Q++ A ++Y  ++  G   D
Sbjct: 421 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 480

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                             + C++++  L  +  +D A  LL+ M
Sbjct: 481 ---------------------------------VVTCSTLIDGLCKSRRLDDAEKLLREM 507

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            +                   +P+  ++ I+I+   K  +LD +L+ F EM   GC+  V
Sbjct: 508 ERN----------------GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ +ID LC S R+ +   LL+ M E G  P      S+   LC+      A  L + 
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+  G  P V    +L+ +LCK  +  EA   L  M  +G LPD V Y++   G      
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            D A  LF+ + + GC P    Y+++++ L   +++ +A +++ E +  G
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 4/232 (1%)

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++++L    KA++ F + T   Q G+       +  +   +  K+   A +LF++     
Sbjct: 105 VLQQLDDLDKAVKFFDWCTG--QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGL 162

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PD + Y+ +I+G CKA+   +A  L +EM  +G++P  A YN +I G C +G +D A+
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           +    M  + + +P VITYT L+D LC + R  DA ++  +M E GCAPN +T+  LI G
Sbjct: 223 VHYRDM--QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            CK      A+V F  M E    PD+F +  LI  +  +  P    ++L+EM
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 2/243 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L ++RR+     L +++ ++       A   LI        ++++   F ++  +G CVP
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG-CVP 549

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y+ +++ LCKS  V    M LK M + G   D    T ++   C S  +D+A  ++
Sbjct: 550 TVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +   G     V +++L+    K   +D+A  L+E M+      +  T+  +  GF K 
Sbjct: 610 KLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKS 669

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           +  DKA +LF  M   G +    MY +++  L   ++++ A++++ E   +G   D EI 
Sbjct: 670 AEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEIS 729

Query: 244 SKL 246
             L
Sbjct: 730 RTL 732


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 179/604 (29%), Positives = 287/604 (47%), Gaps = 58/604 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T ++   C + +  +A + F ++   G V +E  +++L+  F K  +V +A  L++ M
Sbjct: 9   TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +  +  N  T+  +IHGF ++++VD A +LF +M ++G   +   Y+ ++ GLC+N  +
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNS 278
           + A +L  EM+  G+ PD      L+      G++ + +K ++ED    D     +  ++
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK-VFEDNSNGDCPPDVVAYST 187

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L   G +D+A  L + M                 + +  P+  +F  +++ L K  
Sbjct: 188 LIAGLCKTGRLDEACKLFEKM----------------RENSCEPDVVTFTALMDGLCKGD 231

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +L  A  +   M    C  NV  Y++LIDGLC + ++ ++ E+ + M   G +P   T N
Sbjct: 232 RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 291

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C    V  AL L+ +M   G  P +     LI  LCK G+A EA R   DM  +
Sbjct: 292 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              PD++ YS  IGG   ++R+D+A  LF D+      PDVV ++ ++ G C A  V +A
Sbjct: 352 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 411

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           E L  EM+     P V TY  L++G+CK G + +A   L RM  K    P+V+TYT LID
Sbjct: 412 ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM-AKRGCQPNVVTYTALID 470

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI-------------------------- 612
             C AG+P  A  L  EM   G  PN IT+ +LI                          
Sbjct: 471 AFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCK 530

Query: 613 ----------TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
                      GLC+  R  AAL     +K+ G  P   ++VALI           A EV
Sbjct: 531 ADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEV 590

Query: 663 LKEM 666
           L+EM
Sbjct: 591 LEEM 594



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/610 (27%), Positives = 295/610 (48%), Gaps = 21/610 (3%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA   F ++K++G  VPN ++YN L+   CK   V    + LKEM++ G   +  T + +
Sbjct: 25  EATTYFAKMKKKGT-VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 83

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C   + D A  +F +++++G +   V ++ LL    + G +D+A EL++ M +  +
Sbjct: 84  IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 143

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           + ++ ++  L+ G  K  ++D AL++F+  +      D   Y  +I GLCK  +L+ A +
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACK 203

Query: 227 LYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L+ +M+ +   PD    + L+      D  +    V E  EDR+     +  +S++  L 
Sbjct: 204 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 263

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +  A  + + MI                +G + PN  +++ +I+       +D AL
Sbjct: 264 KTGQVRDAQEVFKRMI---------------VRG-IEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L  EMT  GC+ ++  YN LIDGLC + R  E+  L  +M+     P   T + +    
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ + +  A  L   M  Q   P V   + L++  C  G   +A R L +MV     PD+
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y++ + G   + R+  A  + + +   GC P+VV Y  +I   C+A +   A  L  E
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P+V TY  LI G+C +G++++A   L R+   E+   D+  Y  ++DGLC  G
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVF 643
           R   A+ L   +++ G  P    ++ALI GLC+     +A  V   M   +  +P+   +
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 607

Query: 644 VALISAFLSE 653
            A+I     E
Sbjct: 608 EAVIQELARE 617



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 3/345 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++ I+I+ L K  +L  A + F +M + G + N + YN LI+G C  +++  +Y LL
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCK 441
           +EM+ESG  P   T +++    CR+  V  A  L R+M   G  P  V +NTLL   LC+
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL-SGLCR 124

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +G   EA+  L +M + G  PD   Y   + GL    ++D+AL++F D     C PDVVA
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y+ +I+GLCK  R+ EA  LF +M      P V T+  L++G CK   + +A   L  M 
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM- 243

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E  + +P+VITY++LIDGLC  G+  DA  ++  M  +G  PN +T+ +LI G C  +  
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +AL+    M   G  PD+  +  LI         P A  +  +M
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 257/604 (42%), Gaps = 76/604 (12%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R  ++     L + +V++ C  +      L+  L   GL++EA  L D+++  GL  P+ 
Sbjct: 89  RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL-QPDK 147

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG---YDKYTLTPLLQVYCNSGQFDKALSV 123
           +SY+ L+  LCK+  +D   M LK  +D   G    D    + L+   C +G+ D+A  +
Sbjct: 148 FSYDTLMAGLCKTGKID---MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F ++ ++    + V F+ L+    K   + +A +++E M+D N   N  T+  LI G  K
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V  A ++F +M   G   +   Y+ +I G C    ++ AL L  EM  +G  PD   
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324

Query: 243 LSKLITSCSDEG---ELTLL---VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI      G   E   L   +K  + + DV T + L     ++      ID A  L 
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL----ERIDMARTLF 380

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M+                K  V P+  +F  ++      G +D A  L  EM    C 
Sbjct: 381 DDML----------------KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 424

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V+ Y +L+DG C   R+ E+  +L+ M + G +P   T  ++    CR          
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR---------- 474

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI- 475
                                     GK   A++ L +MV  G  P+++ Y + IGG   
Sbjct: 475 -------------------------AGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509

Query: 476 --DIKRVDLALE-LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
             D++     LE L RD     C  D+ AY +++ GLC+  R++ A +L   +   G  P
Sbjct: 510 TGDLEEARKMLERLERD---ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 566

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
               Y  LI G C+   + +AM  L  M       P+   Y  +I  L   GR ++A  L
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626

Query: 593 WNEM 596
            +E+
Sbjct: 627 ADEL 630


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/508 (33%), Positives = 253/508 (49%), Gaps = 21/508 (4%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++ N+  +  ++ +LI G  K  +++ A  LF K+  SG       Y  +I GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCN 277
            + A +L+++M   G  P     + +I +    G   E   L+K++ ED  V  +    N
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY-N 119

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++M  L  +G +++A  L   M           E L       +PN  S + II  L + 
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEM-----------ERL-----GCTPNRRSHNTIILGLCQQ 163

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K+D A  +F EM       + + Y  LIDGL  + +L E+Y+L R M +SG  P+  T 
Sbjct: 164 SKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTY 223

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N +   +C    +  AL L + MR +G  P      +LI   CK GK  EAFR L  M  
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G +PD+V YS  I GL  I RVD A  L  D+    C P VV  N +I GLCKA R+ E
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A ++ + M++ G  P V TYN L++G C++G  ++A   LS M+ +   +P+V+TYT L+
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALV 402

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GLC A R  +A  ++ +M+  GCAPN  T+ ALI G C   +    L  F  M   G+ 
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 462

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKE 665
           PD  V+  L +          A E+L+E
Sbjct: 463 PDHVVYGTLAAELCKSGRSARALEILRE 490



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 269/564 (47%), Gaps = 32/564 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+++SY  L++ L K+  ++      +++   G        T L+   C +  FD A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F ++   G     V +++++ A  K G +++AC+LI++M +     +  T+  ++ G  K
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV++AL LF++M + G   +   ++ II GLC+  +++ A Q++ EM+   I PD   
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA--YNLLQAMI 300
              LI   +  G+L    K                 + R ++ +G    A  YN++   I
Sbjct: 188 YGILIDGLAKAGKLNEAYK-----------------LFRRMLDSGITPSAVTYNVV---I 227

Query: 301 KGEPIADVGVEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            G  +A    E L +FK   S    P+  +F+I+I+   K GK+D A  L + MT  G +
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  Y+ LI GLC+  R++++  LL +M +   KPT  T N++   LC+   +  A  +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M   G  P V     L+   C+ G+   A   L+DMV  G  P++V Y+A + GL  
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             R+  A  +F  + + GC P++  Y  +I G C A +V     LF EM+  G+ P    
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467

Query: 537 YNLLINGWCKSGNIDQAMLCLSR---MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           Y  L    CKSG   +A+  L      L  E+   +V  Y   +DGL  AG+ + A+   
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLDAGKMEMALGFV 525

Query: 594 NEMEEKGCAPNRITFMALITGLCK 617
            +M   G  P      +L+ GLCK
Sbjct: 526 RDMVRGGQLPAPERCASLVAGLCK 549



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 221/507 (43%), Gaps = 87/507 (17%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +   + D+  Y ++I GL K  +L  A  L+ ++  SG+TP                 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPS---------------- 44

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLM 314
                            T+   S++  L    S D A  L   M  +G P          
Sbjct: 45  -----------------TVAYTSLIHGLCMANSFDDARELFADMNRRGCP---------- 77

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  P+  ++++II+   K G L+ A  L ++M + G + +V  YN ++DGLC S R
Sbjct: 78  -------PSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGR 130

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE+  L  EME  G  P   + N++   LC++  +  A  +  +M  +   P      +
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  L K GK  EA++    M+  G  P  V Y+  I G+     +D ALELF+ + + G
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P    +NI+I   CK  ++ EA  L   M   G +P V TY+ LI+G C    +D A 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGR-----------------PD---------- 587
             L  M++++   P V+T  TLI GLC AGR                 PD          
Sbjct: 311 HLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 588 --------DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
                    A  L ++M  +G APN +T+ AL++GLCK +R   A   F  MK  G  P+
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +F + ALI  F S        ++  EM
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEM 456



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 265/597 (44%), Gaps = 58/597 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A ++   R L Q ++ S    S  A   LI  L      ++A  LF  + R G C P
Sbjct: 20  LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG-CPP 78

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN +++A CK   ++     +K+M + G   D  T   ++   C SG+ ++AL +F
Sbjct: 79  SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLF 138

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           NE+   G   +    + +++   +  ++D+AC++   M+  +I  +  ++ +LI G  K 
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++++A +LF +M  SG    A  Y+V+I G+C    L+ AL+L+  M+  G  P     
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           + LI +    G++                                 D+A+ LL+ M    
Sbjct: 259 NILIDAHCKRGKM---------------------------------DEAFRLLKRMTDDG 285

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            + DV                 ++  +I+ L    ++D A  L  +M +  C   V   N
Sbjct: 286 HVPDV----------------VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI GLC + R++E+ E+L  M  SG  P   T N++    CR      A  L+  M  +
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P V   T L+  LCK  +  EA      M   G  P++  Y+A I G     +VD  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA----TYNL 539
           L+LF ++   G  PD V Y  + + LCK+ R A A ++  E   +  + S A     Y  
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE--GRESLRSEAWGDEVYRF 507

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            ++G   +G ++ A L   R + +    P      +L+ GLC +G+  +A  +  E+
Sbjct: 508 AVDGLLDAGKMEMA-LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 187/653 (28%), Positives = 325/653 (49%), Gaps = 28/653 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  GS   V  A  +F+Q+K  G C P+   YN +LE L K        +   ++  +
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFG-CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDK 153
               D  T    +  +  SG+ D A     E+I  G +D   H F++L+ A  K G +D+
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG-IDPGVHTFTVLIDALVKSGNIDE 340

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           AC+    M +     N  T+  L++G  K  R+++A ++F +M ++  + DA  Y+ +I 
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           GL K  + +MA  L+ EMK  G+ P+   + I+  ++     + E   L  ++ E   V 
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP 460

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIK--GEPI---------------ADVGVEML 313
            +    N+++ +L   G +D+   +++ M++  GE I               AD  VE  
Sbjct: 461 DV-FTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYP 519

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            +  G  S    +++ +++  + +G +D A+ L   M +  C+  V  Y  L+DGL  + 
Sbjct: 520 SL--GFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+E+  LLREME+ G +P+  T +S+     +R     +L+L  +M  +G    V   +
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L+I  LCK     +A      M +EG  P +  Y   +  L+  +++D AL++F ++   
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              PD   YNI+++GL K+ RV EA  L + M  + ++P + TY  L++G  KSG +++A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
               ++M E E   PDV+ YT+L+D L   G+   A++++  M +K C P+ +T+ +LI 
Sbjct: 758 FNMFTKMTE-EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L K  R   A   F     KG  P++ V+ +LI +F  +     A E+ +EM
Sbjct: 817 SLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 195/663 (29%), Positives = 320/663 (48%), Gaps = 64/663 (9%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           RC  SP  + +  L+  L   G +EEA  +F ++K E  C P+  +YN L++ L K+   
Sbjct: 352 RC--SPNVVTYTTLVNGLAKAGRLEEACEVFVEMK-ENNCSPDAIAYNTLIDGLGKAGEA 408

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
           D+     KEM+D G   +  T   ++ V   +G+  +A  +F+++ + G V D   ++ L
Sbjct: 409 DMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTL 468

Query: 142 LVAFSKWGEVDKAC----ELIERMDDCNIR---------------------------LNE 170
           +    K G++DK      E++E+  +C I                            L E
Sbjct: 469 IDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGE 528

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  L+  F+    VD+A++L + M K         Y  ++ GL K  +L+ A+ L  E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 231 MKGSGITPDFEILSKLITSC----SDEGELTLLVKEIWED--RDVNTMTLLCNSIMRILV 284
           M+  G  P     S L+ S      +E  L+L  + + +    DV+T +L+ N     L 
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC----LC 644

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            +  +DQA ++   M       + G+E L+           ++  ++++L+KD K+D AL
Sbjct: 645 KSDDVDQALDVFGRM------KEEGMEPLL----------GNYKTLLSSLVKDEKIDFAL 688

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F E+ +   + + F+YN +++GL  SNR++E+ +L+  M+     P  FT  S+   L
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +   +  A N+  KM  +GHEP V   T L+  L K GK   A      M ++  +PD+
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V YS+ I  L    RV+ A   F +  + GC P+V  Y+ +I    K   V  A +LF E
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  +   P++ TYN L++G  K+G ++ A   L  M EK    PD++TY  LIDG+   G
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM-EKVGCVPDLVTYNILIDGVGKMG 927

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+A   +  M+EKG  P+ ITF +LI  L K D+   A   F  M+E+G  P +  + 
Sbjct: 928 MVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYN 987

Query: 645 ALI 647
            LI
Sbjct: 988 VLI 990



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 268/589 (45%), Gaps = 67/589 (11%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +++++   +   E D   +++  M     R++      L+  F   + V  AL++F++M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G      MY+ ++  L K      A+ ++ ++    I PD +     + S +  G L
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 257 TLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM----------- 299
               + I E      D  V+T T+L ++    LV +G+ID+A      M           
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDA----LVKSGNIDEACKFFNGMKNLRCSPNVVT 359

Query: 300 ----IKG-------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
               + G       E   +V VEM    +   SP+  +++ +I+ L K G+ D+A  LF+
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMK---ENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G + N+  YN +I  L  + R  E+++L  +++E G  P  FT N++   L +  
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 409 DVVGALNLVRKM-------------------RVQGHEPWVKHNTLLIKELCK-------- 441
            +   L ++++M                    ++G +  V++ +L  K L +        
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536

Query: 442 ----HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
               +G   EA + L  M +   +P +V Y+  + GL    R+D A+ L R++   GC P
Sbjct: 537 AFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VV Y+ +++   K  +  E+  LF+EM+ KG +  V+TY+L+IN  CKS ++DQA+   
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            RM E E   P +  Y TL+  L    + D A+ ++NE++E    P+   +  ++ GL K
Sbjct: 657 GRMKE-EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +R   A      MK + + PD+F + +L+           AF +  +M
Sbjct: 716 SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 241/521 (46%), Gaps = 62/521 (11%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G V+EA  L + +K+   C+P   +Y  L++ L K+  +D     L+EM+  G      T
Sbjct: 542  GHVDEAVKLLEVMKKHE-CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
             + L+  +    Q +++LS+F+E++  G V D   +S+++    K  +VD+A ++  RM 
Sbjct: 601  YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMK 660

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            +  +      +  L+   VK  ++D ALQ+F+++ +S    D  +Y++++ GL K+ +++
Sbjct: 661  EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVD 720

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNS 278
             A +L   MK   I PD    + L+      G L     +  K   E  + + +     S
Sbjct: 721  EACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAY--TS 778

Query: 279  IMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIFKGTVS-- 321
            +M +L   G +  A  + +AM K   + DV                 E    F+ ++S  
Sbjct: 779  LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838

Query: 322  --PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
              PN   +  +I++  K G +D AL LF EM +  C  N+  YNNL+ GL  + RL  + 
Sbjct: 839  CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +LL EME+ G  P   T N                                   +LI  +
Sbjct: 899  KLLEEMEKVGCVPDLVTYN-----------------------------------ILIDGV 923

Query: 440  CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
             K G   EA  +   M ++G +PD++ +++ I  L  + ++  A ELF  +   G  P V
Sbjct: 924  GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983

Query: 500  VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            V YN++I  L +A +V EA  +F+EM  KG +P   T  ++
Sbjct: 984  VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 150/340 (44%), Gaps = 6/340 (1%)

Query: 328 DIIINTLLKDGKLDLALSLFR-EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           D+++N   KD  L LA   F     Q G    V  Y  +I  L  +   +   ++L  M 
Sbjct: 154 DVVVNQ--KD--LHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMW 209

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G + +   L S+ R      +V GAL +  +M+  G  P       +++ L K G   
Sbjct: 210 KEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYH 269

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      + Q    PD   +   +       R+D A E  +++   G  P V  + ++I
Sbjct: 270 SAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLI 329

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
             L K+  + EA   FN M      P+V TY  L+NG  K+G +++A      M E    
Sbjct: 330 DALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNC- 388

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SPD I Y TLIDGL  AG  D A  L+ EM+++G  PN  T+  +I+ L K  R   A  
Sbjct: 389 SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F  +KE+G  PD+F +  LI              ++KEM
Sbjct: 449 LFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 193/468 (41%), Gaps = 60/468 (12%)

Query: 5    LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            L +A R+     L +++ K  C  S      L+         EE+  LFD++ R+G CV 
Sbjct: 573  LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG-CVA 631

Query: 65   NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
            +  +Y+ ++  LCKS  VD        M++ G          LL       + D AL +F
Sbjct: 632  DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF 691

Query: 125  NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            NE+ +   V D  V++I++    K   VD+AC+L++ M + NI  +  T+  L+ G  K 
Sbjct: 692  NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKS 751

Query: 184  SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             R+++A  +F KMT+ G   D   Y  ++  L K  +L  AL ++  M      PD    
Sbjct: 752  GRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811

Query: 244  SKLITSCSDEGEL-------------------------------------TLLVKEIWED 266
            S LI S   EG +                                      L + E  + 
Sbjct: 812  SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 267  RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV--------GVEML----- 313
            R      +  N+++  L   G ++ A  LL+ M K   + D+        GV  +     
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 314  -------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                   M  KG V P+  +F  +I +L K  KL  A  LF  M + G   +V  YN LI
Sbjct: 932  AESYFKRMKEKGIV-PDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI 990

Query: 367  DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            D L  + ++ E+  +  EM+  G  P   T+  M R L  R+    AL
Sbjct: 991  DILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHAL 1038



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 2/237 (0%)

Query: 4    ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
            +L +  +++   ++ + + K RC         LI  LG  G VEEA   F+    +G C 
Sbjct: 782  VLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG-CT 840

Query: 64   PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
            PN   Y+ L+++  K   VD      +EMQ      +  T   LL     +G+ + A  +
Sbjct: 841  PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900

Query: 124  FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              E+   G V + V ++IL+    K G VD+A    +RM +  I  +  TF  LI    K
Sbjct: 901  LEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960

Query: 183  KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              ++ +A +LFD M + G+      Y+V+I  L +  ++  A  ++ EMK  G  PD
Sbjct: 961  VDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 3    SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
            S L++A R+     L +++ K  C         LI  +G +G+V+EA   F ++K +G+ 
Sbjct: 886  SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI- 944

Query: 63   VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            VP+  ++  L+E+L K   +         M++ G+     T   L+ +   +G+  +A  
Sbjct: 945  VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAM 1004

Query: 123  VFNEI 127
            +F+E+
Sbjct: 1005 IFHEM 1009


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 187/681 (27%), Positives = 321/681 (47%), Gaps = 46/681 (6%)

Query: 5   LSRARRIAPLRVLAQDV------------VKSRCFMSPGAL--GFLIRCLGSVGLVEEAN 50
           LS AR++A    L QDV            ++ R     G L    + R L  +   + A 
Sbjct: 51  LSTARKLARSESLQQDVLDLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRLKDPQTAI 110

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           + F      G    + ++ NC L+ L ++ S D +    + M D G+  D YT   +++ 
Sbjct: 111 VFFVWAGDRGF-KHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKS 169

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C   Q DKA ++ ++    G+  E  V++IL  AF K G +  A E+   +       +
Sbjct: 170 LCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PD 225

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              +  +IHG  +K+  D AL+   +M +   A D   Y+++I GLCK  + + A ++  
Sbjct: 226 AIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLH 285

Query: 230 EMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           EM   G+TPD    + ++      G+     +LL   +  +R+        N+++  L  
Sbjct: 286 EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA--VMAERNCRPSCCTYNTLISGLCK 343

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
             ++D+A +L+   +    + DV                 ++ I+ + L K G++D A  
Sbjct: 344 QQNVDRAKDLVDEFVSSGFVPDV----------------VTYSILADGLCKRGRIDEAFE 387

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L +EM+  GC  N+  YN LIDGLC +++ E++YELL  +  SGF P   T   +   LC
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   +  AL +V  M  +G  P V   T L++ LC+ G+  EA     +MV +    D +
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y + + G     R   A ++   I      P +  YN ++ G CK  R+ E  ++F +M
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDM 564

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G +P++ TYN++++G CK G +D+A   L  M       PDV++Y  +IDGL  A +
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVPDVVSYNIIIDGLFKASK 623

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
           P +A  + ++M + G  P+ +T+  L+   CK +R   A+   + M + G+ PD   +  
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LIS          A+E++ EM
Sbjct: 684 LISGLSQTNRLGDAYELMHEM 704



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 179/661 (27%), Positives = 305/661 (46%), Gaps = 80/661 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L R     G +++A  +F  +       P+  +YN ++   C+    D     LKEM + 
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPS-----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNER 255

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D +T   L+   C + + DKA  + +E++D G   + V F+ ++    K G+ ++A
Sbjct: 256 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 315

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M + N R +  T+  LI G  K+  VD+A  L D+   SGF  D   Y ++  G
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLI----TSCSDEGELTLLVKEIWED--RD 268
           LCK  +++ A +L  EM G G TP+    + LI     +   E    LL   +      D
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T++ +     L   G +D+A  +++ M+K               +G  +P+  ++ 
Sbjct: 436 VVTYTIIVDG----LCKEGRLDKALKMVEGMLK---------------RG-CTPSVITYT 475

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++  L + G++D A  +F+EM    C  +   Y +L++G C S+R +E+ +++      
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV-----D 530

Query: 389 GFKPTHF--TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           G + T +    N++    C+   +    N+   M  +G  P +K   +++  LCKHGK  
Sbjct: 531 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 590

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI----------------------------- 477
           EAF FL  M   G +PD+V Y+  I GL                                
Sbjct: 591 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 650

Query: 478 ------KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-L 530
                 +R D A+ + +++   G  PD V YN +ISGL +  R+ +A +L +EM+  G +
Sbjct: 651 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           + +  TYN +I+  CK G + QA+L +  M        + +TY   ID LC  GR D+A 
Sbjct: 711 VSACTTYNTIIDRLCKEGCLKQALLLMDHM-TGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISA 649
            L +EM+      + +++  +I GLCK ++  RA+ +   M+  KG+      F  LI A
Sbjct: 770 SLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 826

Query: 650 F 650
           F
Sbjct: 827 F 827



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 179/687 (26%), Positives = 305/687 (44%), Gaps = 74/687 (10%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           C G++  ++E N        E    P+ ++YN L++ LCK+   D     L EM D G  
Sbjct: 242 CDGALEFLKEMN--------ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACEL 157
            D  T   ++   C +G+F++A S+   + +         ++ L+    K   VD+A +L
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++         +  T+ +L  G  K+ R+D+A +L  +M+  G   +   Y+ +I GLCK
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLL 275
             + E A +L   +  SG  PD    + ++     EG L   +K  E    R      + 
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------------FK 317
             ++M  L   G +D+A+++ + M+  +  AD    + ++                   +
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           GT  P    ++ +++   K+G+LD   ++F +M   GC+ N+  YN ++DGLC   +++E
Sbjct: 534 GT--PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 591

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLI 436
           ++  L  M  +G  P   + N +   L +      A  ++ +M   G  P  V +NTL+ 
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM- 650

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
            + CK  +  +A   L +M++ G  PD V Y+  I GL    R+  A EL  ++  +GC 
Sbjct: 651 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710

Query: 497 PDV-VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
                 YN II  LCK   + +A  L + M   G+  +  TYN+ I+  CK G +D+A  
Sbjct: 711 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 770

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIA-------------------------------- 583
            LS M        D ++YTT+I GLC A                                
Sbjct: 771 LLSEM----DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 826

Query: 584 ----GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
                R D+A+ L   M ++GC+P+ IT+  +IT LCK D+   A   F  M  +G+   
Sbjct: 827 FTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 886

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  LI     +     A +VL+EM
Sbjct: 887 SVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/581 (27%), Positives = 274/581 (47%), Gaps = 34/581 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  L D+    G  VP+  +Y+ L + LCK   +D     +KEM   G   +  T  
Sbjct: 347 VDRAKDLVDEFVSSGF-VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYN 405

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C + + +KA  +   ++  G+V + V ++I++    K G +DKA +++E M   
Sbjct: 406 TLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 465

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  T+  L+ G  +  RVD+A  +F +M      +DA  Y  ++ G CK+ + + A
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMR 281
            ++   ++G   TP  ++ + L+     EG L   +  ++ED   R         N +M 
Sbjct: 526 QKVVDGIRG---TPYIDVYNALMDGYCKEGRLDE-IPNVFEDMACRGCVPNIKTYNIVMD 581

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---FKGT----------------VSP 322
            L  +G +D+A+  L++M     + DV    ++I   FK +                + P
Sbjct: 582 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++ ++    K+ + D A+ + + M + G   +   YN LI GL  +NRL ++YEL+
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701

Query: 383 REMEESG-FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            EM  +G       T N++   LC+   +  AL L+  M   G E       + I  LCK
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVV 500
            G+  EA   L++M     L D V Y+  I GL   +++D A +L R++ A  G C    
Sbjct: 762 EGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +N++I    K +R+ EA  L   M+ +G  PSV TYN++I   CK   +D+A      M
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
             +   +  V +YT LI GLC  GR  +A+ +  EM    C
Sbjct: 879 AVRGIVASSV-SYTVLIYGLCGQGRGKEALQVLEEMASSDC 918


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 219/718 (30%), Positives = 333/718 (46%), Gaps = 67/718 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQV----KREG 60
           L    RI+    L   + K  C       G L++ L   G +  A  L  ++     R G
Sbjct: 99  LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158

Query: 61  L-CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           + C P   SY+ +++ LCK    D      KEM+  G   D  + T L+  +C+SG+++K
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEK 218

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A  +FNE++D G   D     +L+  F K G+V +A EL+E M      L+  T+  LI 
Sbjct: 219 AKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIK 278

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG--- 235
           G   K R+ +A QLF  M K G   DA  Y  ++ GLC+  ++ +AL L+ EM       
Sbjct: 279 GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 338

Query: 236 ----ITPDFEILSKLITSCSDEGEL----------------------TLLVKEIWEDRDV 269
               I PD    S LI     EG++                      + L+K +  +  +
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398

Query: 270 NTMTLL--------C-------NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           +  T L        C        ++M+ L   G+I+ A  L Q M+      D G     
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN-----DTGR---- 449

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
            +     P   S+ III+ L KD + D A  LF EM   G M +V  Y  LI G C S +
Sbjct: 450 -YGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E++  L  EM + G +P   T + +   LC++  V+ A  L+  +  +G    V   T 
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTT 568

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR----DI 490
           L+K LC   +  +A +    M + G +P++V  +  + GL     + +ALEL +    D 
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628

Query: 491 CAHG--CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
             +G  C P+ ++Y+III GLCK  R  EA +LF EM   G+IP V +Y  LI+G+C+SG
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 688

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
               A    + M++     PDV T++ LID LC  G+  +A  L   M ++GC PN +T+
Sbjct: 689 KWKDAKYLFNEMVDI-GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L+ GLC  DR   A   F  M++ G  PD+  +  L+       N   A E+ K+M
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 805



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 193/670 (28%), Positives = 311/670 (46%), Gaps = 56/670 (8%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + +V   C +       LI+ L     + EA  LF  +K+ G C P+  +Y  L++ L
Sbjct: 257 LLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG-CRPDAIAYGTLMKGL 315

Query: 77  CKSCSVDLVEMRLKEMQDYGWGY-------DKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           C++  +++     +EM +    Y       D  T + L+ + C  G+  +A  +   +I 
Sbjct: 316 CQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ 375

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G + D   +S L+        + +A  L   M     R +  T+  L+ G  +   ++ 
Sbjct: 376 RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINI 435

Query: 189 ALQLFDKM----TKSGFASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           ALQL  +M     + G      +  Y +II GLCK+++ + A +L+ EMK  GI PD   
Sbjct: 436 ALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVIS 495

Query: 243 LSKLITSCSDEGE---LTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI      G+      L  E+ +     DV T ++L +    +L   G + +A  LL
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID----MLCKKGKVIEANKLL 551

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + +I+   I DV V    + KG               L    ++  A  LF +M ++GCM
Sbjct: 552 EVVIQRGCILDV-VTCTTLVKG---------------LCMKHRISKATQLFLKMQKLGCM 595

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREM--EESGF----KPTHFTLNSMFR--CLCRRQ 408
            NV     L+ GLC S  ++ + EL + M  + S +    KP   + + +    C C R+
Sbjct: 596 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 655

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           D   A  L ++M+  G  P V   T LI   C+ GK  +A     +MV  G  PD+  +S
Sbjct: 656 D--EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I  L    +V  A EL   +   GC P+ V Y  ++ GLC   R++EA  LF +M   
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK--ESGS---PDVITYTTLIDGLCIA 583
           G +P V TY  L+ G C++GNI  A+    +ML    + G+   PDVI+Y+ +IDGLC  
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR D+A  L+ EM+  G  PN I++ +LI G C+  +   A   F  M ++G++ +   +
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 644 VALISAFLSE 653
             +I  F  E
Sbjct: 894 SVMIHGFCKE 903



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 185/645 (28%), Positives = 291/645 (45%), Gaps = 91/645 (14%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV----------DEHVFSIL 141
           M+  G   D +T   L+   CN  + ++ L+    I+  G++          D    S+L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +    K G+V +A EL+E M      L+  T+  LI G   + R+ +A  LF  M K G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEM------KGSGITPDFEILSKLITS-CSD-- 252
             DA  Y  ++ GLC+   + +ALQL+ EM       G    P     S +I   C D  
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 253 EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           E E   L KE+       DV + T    S++     +G  ++A  L   M+      DVG
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYT----SLIHGFCHSGKWEKAKCLFNEML------DVG 230

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           ++          P+ ++  ++I+   K+GK+  A  L   M   GC+ ++  Y+ LI GL
Sbjct: 231 IQ----------PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-------RV 422
           C  +R+ E+ +L   M++ G +P      ++ + LC+   +  AL+L ++M        +
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGI 340

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P V  +++LI  LCK GK +EA   L  M+Q G + DIV YS  I GL    R+  
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400

Query: 483 ALELFRDICAHGCCPD-----------------------------------------VVA 501
           A  LF  +   GC PD                                         +++
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y+III GLCK +R  EA +LF EM  +G++P V +Y  LI+G+C SG  ++A    + ML
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +     PDV T + LID LC  G+  +A  L   + ++GC  + +T   L+ GLC   R 
Sbjct: 521 DV-GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F  M++ G  P++     L+       N  +A E+ K M
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 170/578 (29%), Positives = 275/578 (47%), Gaps = 29/578 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L   G V EAN L + + + G C+ +  +Y+ L++ LC    +         MQ 
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRG-CILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHV------FSILLVAFSK 147
            G   D  T   L++  C +G  + AL +  E++ D G            +SI++    K
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               D+A EL E M    I  +  ++  LIHGF    + +KA  LF++M   G   D   
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
             V+I  LCK  ++  A +L   +   G   D    + L+     +  ++   +   + +
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590

Query: 268 DVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +  M   + C ++M+ L  +G+I  A  L + M+       +  +          PN  
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK----------PNAI 640

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S+ III+ L K G+ D A  LF+EM  +G + +V  Y +LI G C S + +++  L  EM
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            + G +P   T + +   LC+   V+ A  L+  M  +G  P     T L+K LC + + 
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR----DICAHGCC--PDV 499
            EA +    M + G LPD+V Y   + GL     +  ALEL +    D   +G    PDV
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++Y+III GLCK  R  EA +LF EM   G+IP+V +Y  LI+G+C+SG ++ A    + 
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           M++ +    + +TY+ +I G C  G+ D A  L+ +ME
Sbjct: 881 MVD-QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 272/571 (47%), Gaps = 71/571 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQV----KREG 60
           L    RI+    L   + K  C       G L++ L   G +  A  L  ++     R G
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451

Query: 61  L-CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           + C P   SY+ +++ LCK    D      +EM+  G   D  + T L+  +C SG+++K
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A  +FNE++D G   D    S+L+    K G+V +A +L+E +      L+  T   L+ 
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM------K 232
           G   K R+ KA QLF KM K G   +      ++ GLC++  +++AL+L+  M       
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 233 GSGITPD---FEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSN 286
           G    P+   + I+   +  C  E E   L KE+       DV + T L +   R    +
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR----S 687

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G    A  L   M+      D+GV+          P+ ++F ++I+ L K+GK+  A  L
Sbjct: 688 GKWKDAKYLFNEMV------DIGVQ----------PDVTTFSVLIDMLCKEGKVIEANEL 731

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M Q GC+ N   Y  L+ GLC ++R+ E+ +L  +M++ G  P   T  ++ + LC+
Sbjct: 732 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG--FLPDI 464
             ++  AL L +KM                               L+D  Q G  F PD+
Sbjct: 792 TGNIKTALELHKKM-------------------------------LSDTGQYGTNFKPDV 820

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + YS  I GL    R D A ELF+++ A G  P+V++Y  +I G C++ ++ +A+ LFNE
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           M+ +G+  +  TY+++I+G+CK G ID+A+ 
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 911


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 167/508 (32%), Positives = 252/508 (49%), Gaps = 21/508 (4%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++ N+  +  ++ +LI G  K  +++ A  LF K+  SG       Y  +I GLC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCN 277
            + A +L+++M   G  P     + +I +    G   E   L+K++ ED  V  +    N
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY-N 119

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++M  L  +  +++A  L   M           E L       +PN  S + II  L + 
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEM-----------ERL-----GCTPNRRSHNTIILGLCQQ 163

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K+D A  +F EM       + + Y  LIDGL  + +L E+Y+L + M +SG  P+  T 
Sbjct: 164 SKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTY 223

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N +   +C    +  AL L + MR +G  P      +LI   CK GK  EAFR L  M  
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G +PD+V YS  I GL  I RVD A  L  D+    C P VV  N +I GLCKA R+ E
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A ++ + M++ G  P V TYN L++G C++G  ++A   LS M+ +   +P+V+TYT L+
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALV 402

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GLC A R  +A  ++ +M+  GCAPN  T+ ALI G C   +    L  F  M   G+ 
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 462

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKE 665
           PD  V+  L +          A E+L+E
Sbjct: 463 PDHVVYGTLAAELCKSGRSARALEILRE 490



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 238/503 (47%), Gaps = 21/503 (4%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   + IL+   +K G+++ A  L +++    +  +   +  LIHG    +  D A +LF
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--S 251
             M + G       Y+V+I   CK   LE A  L  +M   G  PD    + ++     S
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
              E  LL+    E           N+I+  L     IDQA  +   M   +        
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD-------- 180

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                   + P++ S+ I+I+ L K GKL+ A  LF+ M   G   +   YN +I G+C 
Sbjct: 181 --------IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL 232

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +  L+E+ EL + M   G +P+ FT N +    C+R  +  A  L+++M   GH P V  
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT 292

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            + LI  LC   +  +A   L DMV+    P +V  +  I GL    R+  A E+   + 
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           + G  PDVV YN ++ G C+A +   A +L ++M+ +GL P+V TY  L++G CK+  + 
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412

Query: 552 QAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           +A    ++M  K SG +P++ TYT LI G C AG+ D  + L+ EM   G +P+ + +  
Sbjct: 413 EACGVFAQM--KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 611 LITGLCKCDRPRAALVHFRMMKE 633
           L   LCK  R   AL   R  +E
Sbjct: 471 LAAELCKSGRSARALEILREGRE 493



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 267/560 (47%), Gaps = 24/560 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+++SY  L++ L K+  ++      +++   G        T L+   C +  FD A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F ++   G     V +++++ A  K G +++AC+LI++M +     +  T+  ++ G  K
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            SRV++AL LF++M + G   +   ++ II GLC+  +++ A Q++ EM+   I PD   
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              LI   +  G+L    K      D  +    +  N ++  +    ++D+A  L ++M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG   P+  +F+I+I+   K GKLD A  L + MT  G + +V 
Sbjct: 248 S---------------KG-CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ LI GLC+  R++++  LL +M +   KPT  T N++   LC+   +  A  ++  M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P V     L+   C+ G+   A   L+DMV  G  P++V Y+A + GL    R+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A  +F  + + GC P++  Y  +I G C A +V     LF EM+  G+ P    Y  L
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471

Query: 541 INGWCKSGNIDQAMLCLSR---MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
               CKSG   +A+  L      L  E+   +V  Y   +DGL  AG+ + A+    +M 
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLEAGKMEMALGFVRDMV 529

Query: 598 EKGCAPNRITFMALITGLCK 617
             G  P      +L+ GLCK
Sbjct: 530 RGGQLPAPERCASLVAGLCK 549



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 222/507 (43%), Gaps = 87/507 (17%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +   + D+  Y ++I GL K  +L  A  L+ ++  SG+TP                 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS---------------- 44

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLM 314
                            T+   S++  L    S D A  L   M  +G P          
Sbjct: 45  -----------------TVAYTSLIHGLCMANSFDDARELFADMNRRGCP---------- 77

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  P+  +++++I+   K G L+ A  L ++M + G + +V  YN ++DGLC S+R
Sbjct: 78  -------PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE+  L  EME  G  P   + N++   LC++  +  A  +  +M  +   P      +
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  L K GK  EA++    M+  G  P  V Y+  I G+     +D ALELF+ + + G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P    +NI+I   CK  ++ EA  L   M   G +P V TY+ LI+G C    +D A 
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGR-----------------PD---------- 587
             L  M++++   P V+T  TLI GLC AGR                 PD          
Sbjct: 311 HLLEDMVKRQC-KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 588 --------DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
                    A  L ++M  +G APN +T+ AL++GLCK +R   A   F  MK  G  P+
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +F + ALI  F S        ++  EM
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEM 456



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 265/597 (44%), Gaps = 58/597 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A ++   R L Q ++ S    S  A   LI  L      ++A  LF  + R G C P
Sbjct: 20  LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG-CPP 78

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN +++A CK   ++     +K+M + G   D  T   ++   C S + ++AL +F
Sbjct: 79  SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 138

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           NE+   G   +    + +++   +  ++D+AC++   M+  +I  +  ++ +LI G  K 
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++++A +LF +M  SG    A  Y+V+I G+C    L+ AL+L+  M+  G  P     
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           + LI +    G+L                                 D+A+ LL+ M    
Sbjct: 259 NILIDAHCKRGKL---------------------------------DEAFRLLKRMTDDG 285

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            + DV                 ++  +I+ L    ++D A  L  +M +  C   V   N
Sbjct: 286 HVPDV----------------VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI GLC + R++E+ E+L  M  SG  P   T N++    CR      A  L+  M  +
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P V   T L+  LCK  +  EA      M   G  P++  Y+A I G     +VD  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA----TYNL 539
           L+LF ++   G  PD V Y  + + LCK+ R A A ++  E   +  + S A     Y  
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE--GRESLRSEAWGDEVYRF 507

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            ++G  ++G ++ A L   R + +    P      +L+ GLC +G+  +A  +  E+
Sbjct: 508 AVDGLLEAGKMEMA-LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 178/577 (30%), Positives = 275/577 (47%), Gaps = 56/577 (9%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D + ++ LL  F + GE+D+A    + M   N+  N     +LI G  K  R   AL+ F
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--S 251
             M  SG  +D  +Y  ++ GL K K+L+ AL +  EM+  G  P+    + LI     +
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVG 309
           +E +    + E  +  + +   +  N+++  L   G +++A  L Q M+  +   + D  
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD-- 185

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                      SPN  ++ ++I+ L K  ++  A+ L   M   GC  +V  Y  L+DGL
Sbjct: 186 ---------RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 236

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C  +++  ++E+LREM ++G  P   T NS+   LCR + V  AL L+R M  +G  P V
Sbjct: 237 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 296

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEG------------------------------ 459
                LI  LCK G+  +A   L DM+ +G                              
Sbjct: 297 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 356

Query: 460 -----FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
                  PD+V YS+ I GL    R+D A  L   + + GC PDV+ Y+ +I GLCKA +
Sbjct: 357 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V EA DL+  M   G    V TY+ LI+G CK+G +D+A L L+RM+ +    P  +TY 
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV-RMGTPPSTMTYN 475

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           +LI GLC     D+AI L  EME   CAP+ +T+  LI G+C+ +R  +A+V     K +
Sbjct: 476 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR 535

Query: 635 -----GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                G   D   + +LI           A +  +EM
Sbjct: 536 CVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEM 572



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 181/598 (30%), Positives = 290/598 (48%), Gaps = 35/598 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQD 94
           L+R     G +++A   FD+++ + L VPN +  + L++ LCK+  S+D +    + MQ 
Sbjct: 15  LLRGFCRGGEIDQAQRCFDEMRSKNL-VPNVFLCSILIDGLCKAKRSIDALRC-FRAMQG 72

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   D    T LL       + D+AL++ +E+ DHG     V ++ L+    K  E D+
Sbjct: 73  SGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDR 132

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-------TKSGFASDAA 206
           A EL E M       +  T+  L+ G  +  ++++A+ LF +M            + +  
Sbjct: 133 AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y V+I GLCK  ++  A++L   MK  G +PD    + L+     E +    V   WE 
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK----VAAAWE- 247

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQ--AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                       ++R ++  G +     YN LL  + +   ++D    M  +     +PN
Sbjct: 248 ------------VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +I+ L K G++  A ++  +M   G   ++ +YN LI+GLC +++++ES  LLR
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
                G KP   T +S+   LCR   +  A  L+  ++ +G  P V   + LI  LCK G
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EAF     M  +G   D+V YS  I GL    RVD A  L   +   G  P  + YN
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 475

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL----SR 559
            +I GLC    + EA +L  EM      PS  TYN+LI+G C+   +D A++ L    +R
Sbjct: 476 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR 535

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +     + D I Y++LIDGLC AGR  +A+  + EM + G  P+ IT+  L+ GL K
Sbjct: 536 CVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 245/522 (46%), Gaps = 32/522 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  +  +++  G C PN  +YN L++ LCK+   D  +   + M+         T  
Sbjct: 95  LDQALAILHEMRDHG-CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYN 153

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEH--------VFSILLVAFSKWGEVDKACEL 157
            LL     +G+ ++A+++F E++D    D           +S+L+    K   V +A EL
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 213

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +E M       +  T+ +L+ G  K+S+V  A ++  +M  +G   +   Y+ ++ GLC+
Sbjct: 214 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 273

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
            +++  AL L  +M   G TP+      LI      G     VK+             C 
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR----VKDA------------CA 317

Query: 278 SIMRILVSNGSID-QAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            +  ++   G+ D   YN+L   + K + + +    +     G + P+  ++  +I  L 
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +  +LD A  L   +   GC  +V LY+ LIDGLC + +++E+++L   M   G      
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   LC+   V  A  L+ +M   G  P       LIK LC      EA   + +M
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-----RDICAHGCCPDVVAYNIIISGLC 510
            +    P  V Y+  I G+  ++RVD A+ L      R + A G   D +AY+ +I GLC
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           KA RVAEA D F EMI  G+IP   TY++L+ G  KS ++ +
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 173/336 (51%), Gaps = 8/336 (2%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++  ++    + G++D A   F EM     + NVFL + LIDGLC + R  ++   
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            R M+ SG         ++   L + + +  AL ++ +MR  G EP V     LI  LCK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC---AHG---- 494
           + +   A      M      P +V Y+  + GL    +++ A+ LF+++    +H     
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+V+ Y+++I GLCKA RV++A +L   M  +G  P V TY +L++G CK   +  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  ML+     P+++TY +L+ GLC A R  DA+ L  +M  +GC PN +T+  LI G
Sbjct: 247 EVLREMLDA-GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LCK  R + A      M +KG  PD+ ++  LI+  
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 152/282 (53%), Gaps = 6/282 (2%)

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P  +T  ++ R  CR  ++  A     +MR +   P V   ++LI  LCK  ++++A R
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M   G + D V Y+A + GL   KR+D AL +  ++  HGC P+VV YN +I GLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG---- 566
           K      A++LF  M +    PS+ TYN L++G  ++G +++AM     ML++ S     
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 567 --SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             SP+VITY+ LIDGLC A R   A+ L   M+ +GC+P+ IT+  L+ GLCK  +  AA
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               R M + G  P++  + +L+           A  ++++M
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 287



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 1/172 (0%)

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PDV  Y  ++ G C+   + +A+  F+EM +K L+P+V   ++LI+G CK+     A+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            C  R ++      D + YT L+ GL    R D A+ + +EM + GC PN +T+ +LI G
Sbjct: 65  RCF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LCK + P  A   F  MK     P M  +  L+           A  + +EM
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 293/627 (46%), Gaps = 51/627 (8%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           +I     L + +  + C  +      L+  L  +G +EEA  L  ++   G C P+  +Y
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTY 59

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
             L++ L K           KEM   G   D    T L++    +G+  +A SV+  +  
Sbjct: 60  TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119

Query: 130 HGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           HG V + V  S ++   SK G +  A  + + M+   +  NE  +  LIHG  K  ++D 
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL++  +M K+    D   Y+V+I GLCK+  +E A   + EM  +G  PD    + LI+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                G        + ++  +N  T+                                  
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTI---------------------------------- 265

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                         +  ++  I++ L K+ K++ A++L  ++T  GC   +  YN L++G
Sbjct: 266 --------------DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC   RLEE+ +LLR++ ++G  P   T  S+   L + +    A  L ++M ++G    
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T LI+EL + GK  +A      M   G +PD+V  S  I GL    R+  A+ +F+
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            + A G  P+ V Y+ +I GLCKA+++  A ++  +M      P   TYN+LI+G CKSG
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +++ A      MLE     PDV TY  LI G C AG  D A  ++++M    C+ N +T+
Sbjct: 492 DVEAARAFFDEMLEAGC-KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKG 635
            ALI+GLCK  +   A ++F+ MKE+G
Sbjct: 551 GALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 176/625 (28%), Positives = 295/625 (47%), Gaps = 56/625 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  L +++   G C P   +YN LL  LCK   ++     L+++ D G   D  T T
Sbjct: 2   IEEAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+       +  +A  +F E+   G  +D   ++ L+    + G++ +A  + + M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  T   +I G  K  R+  A+++F  M   G A +  +Y  +I GLCK ++++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L++ ++MK +  TPD                                 T+  N ++  L 
Sbjct: 181 LEMLAQMKKAFCTPD---------------------------------TITYNVLIDGLC 207

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            +G ++ A      M++                    P+  +++I+I+   K G  D A 
Sbjct: 208 KSGDVEAARAFFDEMLEA----------------GCKPDVYTYNILISGFCKAGNTDAAS 251

Query: 345 -SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            SL +E T  GC  ++  Y  ++D L  + ++EE+  L+ ++  +G  PT  T N++   
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+   +  A++L+RK+   G  P V   T LI  L K  ++ EA++   +M   G   D
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            VCY+A I  L+   ++  A  +++ + +HGC PDVV  + +I GL KA R+  A  +F 
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M  +GL P+   Y+ LI+G CK+  +D A+  L++M +K   +PD ITY  LIDGLC +
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKS 490

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  + A   ++EM E GC P+  T+  LI+G CK     AA   F  M       ++  +
Sbjct: 491 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550

Query: 644 VALISAFLSE---LNPPLAFEVLKE 665
            ALIS            L F+ +KE
Sbjct: 551 GALISGLCKRRQLTKASLYFQHMKE 575



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 180/346 (52%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P  ++++ ++N L K G+L+ A+ L R++   GC  +V  Y +LIDGL    R  E+Y+
Sbjct: 18  TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 77

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L +EM   G         ++ R L +   +  A ++ + M   G  P V   + +I  L 
Sbjct: 78  LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+   A R    M   G  P+ V YSA I GL   +++D ALE+   +    C PD +
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN++I GLCK+  V  A   F+EM+  G  P V TYN+LI+G+CK+GN D A   L++ 
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                 + D+ TYT ++D L    + ++A+ L  ++   GC P   T+ AL+ GLCK  R
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A+   R + + G  PD+  + +LI     E     A+++ KEM
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 188/669 (28%), Positives = 319/669 (47%), Gaps = 55/669 (8%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +I  +  VG ++EA  L   +  +GL VPN Y+Y  +   LC++  ++  ++  +EMQ 
Sbjct: 268 LVIEGMCQVGDIDEAVELKRSMGEKGL-VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK 326

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
            G   D    + L+  +   G  D+ L + + ++  G  ++   +++L+    K+G+++K
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 386

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A E+++ M     + N +TFC+LI G+ ++  + +AL+L D+M K      A  Y  +I 
Sbjct: 387 AAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 446

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC  K L +A +L  +M  SG+ P+  + S LI + + EG +    + + +    + + 
Sbjct: 447 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE-ARRLLDGMSCSGVA 505

Query: 274 --LLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             + C N+I+  L   G +++A   L                L I    + P+  +F   
Sbjct: 506 PDIFCYNAIISCLSKAGKMEEASTYL----------------LEIQGRGLKPDAVTFGAF 549

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K GK+  A   F EM   G M N  LY  LI+G   +  L E+  + R +   G 
Sbjct: 550 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T ++    L +   V  AL +  +++ +G  P V   + LI   CK G+  +AF 
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M  +G  P+I  Y+A + GL     +  A +LF  +   G  PD V Y+ +I G C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--- 567
           K++ VAEA  LF+EM +KG+ P    YN L++G CK G++++AM     ML+K   +   
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS 789

Query: 568 ------------------------------PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                                         PD +TYTT+ID  C AG+ ++A +L+ EM+
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           E+    + +T+ +L+ G  K  +       F  M  KG+KPD   +  +I A   E N  
Sbjct: 850 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909

Query: 658 LAFEVLKEM 666
            AF++  E+
Sbjct: 910 EAFKLRDEV 918



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 300/659 (45%), Gaps = 57/659 (8%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           SP     LI     +G+++EA  +F   K + + + +    N LL+ L K   ++L    
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILI-SLIRCNSLLKDLLKCGMMELFWKV 215

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
              M D   G+D YT T L+   C                                  K 
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALC----------------------------------KT 241

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++  A  ++  MD+  +  NE  + ++I G  +   +D+A++L   M + G   +   Y
Sbjct: 242 GDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTY 301

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWED 266
            +I  GLC+ K++  A   + EM+ +G+ PD+   S LI     EG++   L +K++   
Sbjct: 302 TIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVS 361

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM---------------IKG---EPIADV 308
             +    +  N ++  L   G +++A  +L+ M               I+G   E     
Sbjct: 362 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGR 421

Query: 309 GVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
            +E+L  + K  + P+  S+  +IN L     L LA  L  +MT  G   NV +Y+ LI 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
              +  R+EE+  LL  M  SG  P  F  N++  CL +   +  A   + +++ +G +P
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                   I    K GK  EA ++  +M+  G +P+   Y+  I G      +  AL +F
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           R + A G  PDV   +  I GL K  RV EA  +F+E+  KGL+P V TY+ LI+G+CK 
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G +++A      M  K   +P++  Y  L+DGLC +G    A  L++ M EKG  P+ +T
Sbjct: 662 GEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 720

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +I G CK +    A   F  M  KG++P  FV+ AL+     E +   A  + +EM
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 181/724 (25%), Positives = 312/724 (43%), Gaps = 70/724 (9%)

Query: 5    LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            L RA+R+   ++  +++ K+       A   LI      G ++E   + D +   G+ + 
Sbjct: 308  LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI- 366

Query: 65   NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
            N  +YN L+  LCK   ++     LK M   G   +  T   L++ YC      +AL + 
Sbjct: 367  NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 125  NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            +E+     V   V +  ++       ++  A +L+E+M    ++ N   + +LI  +  +
Sbjct: 427  DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486

Query: 184  SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             R+++A +L D M+ SG A D   Y+ II  L K  ++E A     E++G G+ PD    
Sbjct: 487  GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546

Query: 244  SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
               I   S  G++T   K   E  D     L+ N+ +  ++ NG   +A NL++A+    
Sbjct: 547  GAFILGYSKTGKMTEAAKYFDEMLD---HGLMPNNPLYTVLINGHF-KAGNLMEALSIFR 602

Query: 304  PIADVGV---------------------EMLMIF-----KGTVSPNTSSFDIIINTLLKD 337
             +  +GV                     E L +F     KG V P+  ++  +I+   K 
Sbjct: 603  RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV-PDVFTYSSLISGFCKQ 661

Query: 338  GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            G+++ A  L  EM   G   N+F+YN L+DGLC S  ++ + +L   M E G +P   T 
Sbjct: 662  GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721

Query: 398  NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++M    C+ ++V  A +L  +M  +G +P       L+   CK G   +A     +M+Q
Sbjct: 722  STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 458  EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            +GF    + ++  I G     ++  A +LF+++ A    PD V Y  +I   CKA ++ E
Sbjct: 782  KGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 840

Query: 518  AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY---- 573
            A  LF EM  + LI    TY  L+ G+ K G   +      +M+ K    PD +TY    
Sbjct: 841  ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK-GVKPDEVTYGLVI 899

Query: 574  -------------------------------TTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                             LI  LC      +A  L +EM E G  
Sbjct: 900  YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 959

Query: 603  PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            P+      L+    +  +   A   F  +K  G+ PD    + L++  L++ +   A  +
Sbjct: 960  PSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019

Query: 663  LKEM 666
            +K++
Sbjct: 1020 IKQL 1023



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 223/505 (44%), Gaps = 25/505 (4%)

Query: 28   MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A+ F    LG    G + EA   FD++   GL +PNN  Y  L+    K+ ++   
Sbjct: 539  LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEA 597

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
                + +   G   D  T +  +     +G+  +AL VF+E+ + G V D   +S L+  
Sbjct: 598  LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            F K GEV+KA EL + M    I  N   +  L+ G  K   + +A +LFD M + G   D
Sbjct: 658  FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 717

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVK 261
            +  Y  +I G CK++ +  A  L+ EM   G+ P   + + L+  C  EG++     L +
Sbjct: 718  SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 777

Query: 262  EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
            E+ +     T++   N+++     +  I +A  L Q MI  +                + 
Sbjct: 778  EMLQKGFATTLSF--NTLIDGYCKSCKIQEASQLFQEMIAKQ----------------IM 819

Query: 322  PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            P+  ++  +I+   K GK++ A  LF+EM +   + +   Y +L+ G     +  E + L
Sbjct: 820  PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 382  LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              +M   G KP   T   +    C+  ++V A  L  ++  +G       + LLI  LCK
Sbjct: 880  FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 939

Query: 442  HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                 EA + L +M + G  P +   +  +    +  ++D A  +F  + + G  PD   
Sbjct: 940  REDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999

Query: 502  YNIIISGLCKAQRVAEAEDLFNEMI 526
               +++G        +A +L  +++
Sbjct: 1000 LIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 8/379 (2%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           LCNS +  L +NG + Q   +++       I D    +L  F+     +   FDI+I++ 
Sbjct: 116 LCNSELFGL-ANGVLTQ---MIRTPYSSSSILD---SVLFWFRNYGGSSPVVFDILIDSY 168

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G LD A ++F        + ++   N+L+  L     +E  +++   M ++      
Sbjct: 169 KRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDV 228

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T   +   LC+  D+ GA  ++ +M  +G  P     +L+I+ +C+ G   EA      
Sbjct: 229 YTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRS 288

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M ++G +P+   Y+    GL   KR++ A   F ++   G  PD  A + +I G  +   
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + E   + + M++ G+  ++ TYN+LI+G CK G +++A   L  M+      P+  T+ 
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL-GCKPNSRTFC 407

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI+G C       A+ L +EME++   P+ +++ A+I GLC C     A      M   
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467

Query: 635 GMKPDMFVFVALISAFLSE 653
           G+KP++ V+  LI A+ SE
Sbjct: 468 GLKPNVVVYSILIMAYASE 486


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/496 (32%), Positives = 246/496 (49%), Gaps = 48/496 (9%)

Query: 169  NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
            N  TF +LIHG  +   +  A +L  +M + G   +  +++V+I GLC  ++L+ AL+L+
Sbjct: 876  NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935

Query: 229  SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             EM+ SG  P                             DV T + + +S    LV +G 
Sbjct: 936  KEMEESGSCPP----------------------------DVFTYSTIVDS----LVKSGK 963

Query: 289  IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            +D A  L++ M+                KG  SPN  ++  +++ L K GKLD A +L +
Sbjct: 964  VDDACRLVEDMVS---------------KG-CSPNVVTYSSLLHGLCKAGKLDEATALLQ 1007

Query: 349  EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
             MT+ GC  N+  YN +IDG C   R++E+Y LL EM + G +P   T   +    C+  
Sbjct: 1008 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067

Query: 409  DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
                A+ LV  M  +G+ P +     L+   CK  +   A + L+ M+Q+G +P++V Y+
Sbjct: 1068 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 1127

Query: 469  AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
              I GL    +V   + L   + ++ C PD+V +N II  +CK  RV  A +LFN +   
Sbjct: 1128 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 1187

Query: 529  GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            G  P++ TYN L++G CKS   DQA   L  M  K+  SPD+ITY T+IDGLC + R D 
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 1247

Query: 589  AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            A  L+ +M   G AP+ +T+  +I+ LCK      A     +M + G  P    +  LI 
Sbjct: 1248 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307

Query: 649  AFLSELNPPLAFEVLK 664
             F    N   A E+L+
Sbjct: 1308 GFCKTGNLDKALEILQ 1323



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 278/621 (44%), Gaps = 92/621 (14%)

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV 143
           LV     E +D G+ ++ +    LL V   + Q+ +A  +F   I+  W  + V      
Sbjct: 110 LVFFEWAETRD-GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTV------ 162

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                                       T+  LI GF++  ++  A +LFD+M + G  +
Sbjct: 163 ----------------------------TYSTLISGFIRAGKILPAYELFDEMNRKGLKA 194

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
            A ++  I+ GLC   Q   A+  + EM  +   PD    + +I   S    L   ++ +
Sbjct: 195 HAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLL 253

Query: 264 WE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTV 320
            E  D          N+++        ++ A  LL+ M+ +G P                
Sbjct: 254 EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP---------------- 297

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  S+  +IN L K  ++D A  +  +M Q GC  NV  Y  L+DG C    L+ + E
Sbjct: 298 -PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 356

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L+R+M E G++P   T N++    CRR D+  A  +++ M   G  P   + + +I   C
Sbjct: 357 LVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC 416

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K GK  EA   L  M++ G  PD+ C S  I  L     +D A EL R      C PDVV
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVV 476

Query: 501 AYNIIISGLCKAQRVAEAED-----------------------------------LFNEM 525
           AY+I+I  LCKA+R+ EAE                                    LF+ M
Sbjct: 477 AYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G++P V TY+++I+ +CK  N+D A   L RM E +   PDV+TY+ LI+GLC AG 
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC-VPDVVTYSALINGLCKAGT 595

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D A  ++ EM   GCAPN +T+  LI GLCK ++   A     +M+++   PD   +  
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI+   +      A+ VL+EM
Sbjct: 656 LINGLCNASRLEEAWRVLREM 676



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 276/568 (48%), Gaps = 25/568 (4%)

Query: 55   QVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN 113
            QV R  LC  PN +++  L+  LC++  +      LKEM  +G   +      +++  C+
Sbjct: 865  QVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCS 924

Query: 114  SGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
            + + D AL +F E+ + G     VF  S ++ +  K G+VD AC L+E M       N  
Sbjct: 925  ARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVV 984

Query: 172  TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            T+  L+HG  K  ++D+A  L  +MT+SG + +   Y+ II G CK  +++ A  L  EM
Sbjct: 985  TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044

Query: 232  KGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
               G  P+   + +L      C    +   LV+ + E   V  +    NS++ +      
Sbjct: 1045 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL-FTYNSLLDMFCKKDE 1103

Query: 289  IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            +++A  LL +MI+               KG V PN  S++ +I  L K  K+   + L  
Sbjct: 1104 VERACQLLSSMIQ---------------KGCV-PNVVSYNTVIAGLCKATKVHEGVLLLE 1147

Query: 349  EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            +M    C+ ++  +N +ID +C + R++ +YEL   ++ESG  P   T NS+   LC+ +
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207

Query: 409  DVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                A  L+R+M R QG  P +     +I  LCK  +   A++    M+ +G  PD V Y
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267

Query: 468  SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
            S  I  L   + +D A  +   +  +G  P  + Y  +I G CK   + +A ++   +++
Sbjct: 1268 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327

Query: 528  KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            KG  P V T+++ I+   K G + QA   L  ML +    PD +TY TL+ G C A   +
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML-RAGLVPDTVTYNTLLKGFCDASLTE 1386

Query: 588  DAIMLWNEMEEKGCAPNRITFMALITGL 615
            DA+ L+  M + GC P+  T+  L+  L
Sbjct: 1387 DAVDLFEVMRQCGCEPDNATYTTLVGHL 1414



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 189/743 (25%), Positives = 334/743 (44%), Gaps = 89/743 (11%)

Query: 5    LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            L +A+R+         +VK+RC+        ++  L     + +A +LFD+++  G+ +P
Sbjct: 485  LCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV-MP 543

Query: 65   NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA---- 120
            +  +Y+ ++ + CK  ++D     L+ M++     D  T + L+   C +G  DKA    
Sbjct: 544  DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVF 603

Query: 121  -----------LSVFNEIID---------------------HGWVDEHVFSILLVAFSKW 148
                       L  +N +ID                         D   ++ L+      
Sbjct: 604  QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663

Query: 149  GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM--TKSG--FASD 204
              +++A  ++  M D     +  T+  L+    K + ++   QL  +M  T+ G   A+ 
Sbjct: 664  SRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANG 723

Query: 205  AAMYDVII-GGLCKNKQLEMALQLYSEMK-------GSGITPDFEILSKLITSCSDEGEL 256
            A ++  +I G +           L S+ +           +P        +T+ + +G  
Sbjct: 724  ARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPH--QYRVTAVATQGGF 781

Query: 257  TLLVKEI------WEDRDVN----TMTLLCNSIMRIL--VSNG----------SIDQAYN 294
               +  I      WE  +      T  L    + ++L  V NG          +  + YN
Sbjct: 782  HHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYN 841

Query: 295  --------LLQAMIKGEPIADVGVEMLMIFKGTV--SPNTSSFDIIINTLLKDGKLDLAL 344
                    LLQA+++ +   D     L +++  +  SPN  +F I+I+ L + G +  A 
Sbjct: 842  HDTYTCNCLLQALLRLKRPKDA----LQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAY 897

Query: 345  SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTLNSMFRC 403
             L +EM + G  QNV L+N +I GLC++ +L+ + EL +EMEESG   P  FT +++   
Sbjct: 898  ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957

Query: 404  LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            L +   V  A  LV  M  +G  P V   + L+  LCK GK  EA   L  M + G  P+
Sbjct: 958  LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017

Query: 464  IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            IV Y+  I G   + R+D A  L  ++   GC P+VV Y +++   CK  +  +A  L  
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077

Query: 524  EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
             M+ KG +P++ TYN L++ +CK   +++A   LS M++K    P+V++Y T+I GLC A
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKA 1136

Query: 584  GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
             +  + ++L  +M    C P+ +TF  +I  +CK  R   A   F +++E G  P++  +
Sbjct: 1137 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 1196

Query: 644  VALISAFLSELNPPLAFEVLKEM 666
             +L+           A  +L+EM
Sbjct: 1197 NSLVHGLCKSRRFDQAEYLLREM 1219



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 261/574 (45%), Gaps = 29/574 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           +A+ LF + + EG    +  +Y+ L+    ++  +        EM   G          +
Sbjct: 144 QAHDLF-RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSI 202

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
           L+  C++GQ   A+  F E+      D   ++ ++   SK   +D A  L+E M D    
Sbjct: 203 LRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 262

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            N  ++  ++HGF K +RV+ AL L ++M   G   D   Y  +I GLCK  Q++ A ++
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             +M   G  P+      L+      G+L     LV+++ E R      +  N+IM +  
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE-RGYRPNAITYNNIMHVFC 381

Query: 285 SNGSIDQAYNLLQAMIK-GEPIADVGVEML-------------------MIFKGTVSPNT 324
               +++A+ +LQ MI+ G P   +    +                   MI +G   P+ 
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG-CRPDV 440

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           +    +I+ L K   +D A  L R    + C  +V  Y+ LI  LC + RL E+   L  
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M ++   P   T NS+   LC+ + +  A  L  +MR  G  P V   +++I   CK   
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              AF+ L  M +   +PD+V YSA I GL     VD A ++F+++   GC P++V YN 
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GLCK  +V +A ++   M  +   P   TY  LING C +  +++A   L  M  K+
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM--KD 678

Query: 565 SGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            G  PD +TY TL+  L      +    L  EME
Sbjct: 679 KGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 267/565 (47%), Gaps = 25/565 (4%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RA +I P   L  ++ +       G    ++R L   G   +A + F ++ +   C P++
Sbjct: 173 RAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDS 230

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +YN ++  L KS  +D     L+EM D G+  + ++   +L  +C + + + AL +  +
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++  G   + V ++ ++    K  +VD+AC ++++M     + N  T+  L+ GF +   
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A++L  KMT+ G+  +A  Y+ I+   C+   +E A Q+   M  +G  PD    S 
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 246 LITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           +I+     G+L     LL + I   R         ++++  L    +ID A  LL+  I 
Sbjct: 411 IISGFCKAGKLREAHDLLEQMI--RRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI- 467

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G++         +P+  ++ I+I+ L K  +L  A S    M +  C  +V  
Sbjct: 468 -------GMD--------CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+++DGLC S R+ +++ L   M  +G  P   T + +    C+  ++  A  ++ +M+
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                P V   + LI  LCK G   +AF    +M+  G  P++V Y+  I GL  I +V+
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A E+   +    C PD + Y  +I+GLC A R+ EA  +  EM  KG +P   TY  L+
Sbjct: 633 QAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLL 692

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG 566
               K+ N++     L  M   E G
Sbjct: 693 RALQKTNNLELVEQLLKEMEATEEG 717



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/634 (25%), Positives = 288/634 (45%), Gaps = 42/634 (6%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            +I+ L S   ++ A  LF +++  G C P+ ++Y+ ++++L KS  VD     +++M   
Sbjct: 918  VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK 977

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   +  T + LL   C +G+ D+A ++   +   G     V ++ ++    K G +D+A
Sbjct: 978  GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 1037

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              L+E M D   + N  T+ VL+  F K  + + A+ L + M + G+  +   Y+ ++  
Sbjct: 1038 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 1097

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNT 271
             CK  ++E A QL S M   G  P+    + +I      +   E  LL++++  +  V  
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157

Query: 272  MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            +    N+I+  +     +D AY L                  +I +   +PN  +++ ++
Sbjct: 1158 IVTF-NTIIDAMCKTYRVDIAYELFN----------------LIQESGCTPNLVTYNSLV 1200

Query: 332  NTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            + L K  + D A  L REMT + GC  ++  YN +IDGLC S R++ +Y+L  +M   G 
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 391  KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
             P   T + +   LC+ + +  A N++  M   G +P       LI   CK G   +A  
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 451  FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
             L  ++ +G  PD+V +S  I  L    R+  A EL   +   G  PD V YN ++ G C
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 511  KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS-------GNIDQAMLCLSRMLEK 563
             A    +A DLF  M   G  P  ATY  L+               + ++M+     L  
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440

Query: 564  ESGS---------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            E  S          DV     ++D     G P DA  ++  M+++    N + + A++  
Sbjct: 1441 ELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGV 1496

Query: 615  LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
                 +   A   +R+M  +G++PD   F++L++
Sbjct: 1497 YVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLT 1530



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 248/522 (47%), Gaps = 64/522 (12%)

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           G  S  ++ + I+ G    + L +AL  Y   +G  ++P  EI+ K++    D G   L+
Sbjct: 59  GSDSPISVLERIVQGASDEQALRVALDEY---RGQ-LSP--EIVGKVLQRLIDPGA-ALV 111

Query: 260 VKEIWEDRDVNTMTLLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-VGVEMLM--- 314
             E  E RD     + C N ++ +LV      QA++L ++ I+G+   D V    L+   
Sbjct: 112 FFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGF 171

Query: 315 IFKGTVSPNTSSFD---------------IIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I  G + P    FD                I+  L   G+   A+  FREM++  C  + 
Sbjct: 172 IRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDS 230

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +I+GL  S+RL+++  LL EM ++GF P  F+ N++    C+   V  AL L+ +
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P V   T +I  LCK  +  EA R +  M+Q G  P+++ Y   + G   +  
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350

Query: 480 VDLALELFRDIC--------------------------AH---------GCCPDVVAYNI 504
           +D A+EL R +                           AH         GC PD + Y+ 
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           IISG CKA ++ EA DL  +MI +G  P VA  + LI+  CK+  ID A   L RM    
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL-RMSIGM 469

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             +PDV+ Y+ LI  LC A R  +A    + M +  C P+ +T+ +++ GLCK  R   A
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + F  M+  G+ PD+  +  +I +F  + N   AF++L+ M
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM 571



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 171/729 (23%), Positives = 305/729 (41%), Gaps = 119/729 (16%)

Query: 34   GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
            G L+     VG ++ A  L  ++   G   PN  +YN ++   C+   ++     L+ M 
Sbjct: 339  GTLVDGFCRVGDLDGAVELVRKMTERGY-RPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397

Query: 94   DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVD 152
              G   D    + ++  +C +G+  +A  +  ++I  G   D    S L+ A  K   +D
Sbjct: 398  QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457

Query: 153  KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
             A EL+      +   +   + +LIH   K  R+ +A    D M K+    D   Y+ ++
Sbjct: 458  SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517

Query: 213  GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEG-----ELTLLVKEIWED 266
             GLCK++++  A  L+  M+ +G+ PD    S +I S C D       ++   +KE    
Sbjct: 518  DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577

Query: 267  RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             DV T + L N     L   G++D+A+++ Q M+                    +PN  +
Sbjct: 578  PDVVTYSALING----LCKAGTVDKAFDVFQEMLGC----------------GCAPNLVT 617

Query: 327  FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            ++ +I+ L K  K++ A  +   M +  C  +   Y  LI+GLCN++RLEE++ +LREM+
Sbjct: 618  YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677

Query: 387  ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK--------- 437
            + G  P   T  ++ R L +  ++     L+++M       W  +   L +         
Sbjct: 678  DKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLM 737

Query: 438  --------ELCKHGKAMEA-------------FRFLTDMVQEGFLPDIV----------- 465
                     L    + +++             +R      Q GF   IV           
Sbjct: 738  MAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEY 797

Query: 466  -----------CYSAAIGGLID-IKRVDLALELFR-DICAHGCCPDVVAYNIIISGLCKA 512
                         +  +G ++  ++  D AL  F       G   D    N ++  L + 
Sbjct: 798  AETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRL 857

Query: 513  QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM------------------ 554
            +R  +A  ++   +     P++ T+ +LI+G C++G+I  A                   
Sbjct: 858  KRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILH 915

Query: 555  ------LCLSRMLE---------KESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                  LC +R L+         +ESGS  PDV TY+T++D L  +G+ DDA  L  +M 
Sbjct: 916  NVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV 975

Query: 598  EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
             KGC+PN +T+ +L+ GLCK  +   A    + M   G  P++  +  +I          
Sbjct: 976  SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 1035

Query: 658  LAFEVLKEM 666
             A+ +L+EM
Sbjct: 1036 EAYHLLEEM 1044



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/651 (23%), Positives = 295/651 (45%), Gaps = 75/651 (11%)

Query: 17   LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
            L +D+V   C  SP  + +  L+  L   G ++EA  L  ++ R G C PN  +YN +++
Sbjct: 970  LVEDMVSKGC--SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIID 1026

Query: 75   ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
              CK   +D     L+EM D G   +  T T LL  +C  G+ + A+ +   +++ G+V 
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086

Query: 135  E-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
                ++ LL  F K  EV++AC+L+  M       N  ++  +I G  K ++V + + L 
Sbjct: 1087 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 1146

Query: 194  DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            ++M  +    D   ++ II  +CK  ++++A +L++ ++ SG TP+      L+T     
Sbjct: 1147 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN------LVTY---- 1196

Query: 254  GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                   NS++  L  +   DQA  LL+ M +            
Sbjct: 1197 -----------------------NSLVHGLCKSRRFDQAEYLLREMTR------------ 1221

Query: 314  MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
               K   SP+  +++ +I+ L K  ++D A  LF +M   G   +   Y+ +I  LC   
Sbjct: 1222 ---KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
             ++E+  +L  M ++GF P   T  ++    C+  ++  AL +++ +  +G  P V   +
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338

Query: 434  LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            + I  L K G+  +A   L  M++ G +PD V Y+  + G  D    + A++LF  +   
Sbjct: 1339 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQC 1398

Query: 494  GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG---NI 550
            GC PD   Y  ++  L   +     +DL  E ++K ++ +    N  ++   ++      
Sbjct: 1399 GCEPDNATYTTLVGHLVDKK---SYKDLLAE-VSKSMVDTGFKLNHELSSKLEASIEVEA 1454

Query: 551  DQAMLCLSRMLEKESGSP-------------DVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            D  + C    +  + GSP             +V+ ++ ++       + + A  LW  M 
Sbjct: 1455 DVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 598  EKGCAPNRITFMALITGLCKCDRPRAALVHF-RMMKEKGMKPDMFVFVALI 647
             +G  P+ +TF++L+T  C      AA+  F  + ++ G++P +  F  +I
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVI 1565



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 270/650 (41%), Gaps = 132/650 (20%)

Query: 5    LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
            L +A ++     L Q + +S C  SP  + +  +I     +G ++EA  L +++  +G C
Sbjct: 993  LCKAGKLDEATALLQRMTRSGC--SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGC 1049

Query: 63   VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
             PN  +Y  LL+A CK    +     ++ M + G+  + +T   LL ++C   + ++A  
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109

Query: 123  VFNEIIDHGWV------------------------------------DEHVFSILLVAFS 146
            + + +I  G V                                    D   F+ ++ A  
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169

Query: 147  KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT-KSGFASDA 205
            K   VD A EL   + +     N  T+  L+HG  K  R D+A  L  +MT K G + D 
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229

Query: 206  AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGE--LTL 258
              Y+ +I GLCK+K+++ A +L+ +M   G+ PD    S +I+S C     DE    L L
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289

Query: 259  LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
            ++K  ++   +   TL+           G++D+A  +LQ               L++ KG
Sbjct: 1290 MLKNGFDPGAITYGTLIDG-----FCKTGNLDKALEILQ---------------LLLSKG 1329

Query: 319  TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            +  P+  +F I I+ L K G+L  A  L   M + G + +   YN L+ G C+++  E++
Sbjct: 1330 SY-PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388

Query: 379  YELLREMEESGFKP-------------------------------THFTLNSMF------ 401
             +L   M + G +P                               T F LN         
Sbjct: 1389 VDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEA 1448

Query: 402  --------RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK----HGKAMEAF 449
                    R  C   D+ G     +  R +  E   + N +L   +      H +  +AF
Sbjct: 1449 SIEVEADVRLGCAIVDMFGKCGSPQDAR-KVFEGMDQRNVVLWSAMLGVYVFHKQEEQAF 1507

Query: 450  RFLTDMVQEGFLPDIVCYSAAI-----GGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
                 M  EG  PD V + + +      GL+D   VD  + + RD   +G  P V  ++ 
Sbjct: 1508 GLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAA-VDEFVSISRD---YGLEPGVDHFSC 1563

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
            +I  L +   V EAEDL   M  K   PS AT+N L++ +   G+ ++A+
Sbjct: 1564 VIDLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERAL 1610


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 169/565 (29%), Positives = 275/565 (48%), Gaps = 22/565 (3%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+ +D ++   LL +   SG   +   V+ +++  G     V F IL+    K G+  +A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E +  +D+ ++  +   F VLIHG  K    D+A++LF+ M  S    +   Y+ +I G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 215 LCKNKQLEMALQLYSEM--KGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVN 270
           LCK+  LE A +L  EM  KG    PD    + LI +      +      +E  +   +N
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV---------------GVEMLMI 315
              L CN ++  +  +G +++A  +L  M    P+ DV                VE   I
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 316 FKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
            K  + SP+  +F+ +++   K G L  AL +  EM +   + +V  Y  L++GLC   +
Sbjct: 262 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           ++ ++ LL E+   G+ P      S+   LC+  ++  A  LV++M V+G    V   + 
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+   C+ G   +A   L +MV    +P +  Y+  +GGLI    +  A+ L  D+ A G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVV YN +I GLCKA RV EA DL +EM ++G  P+  T   ++ G C+ G +D A 
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             +  M  K   +P+V+ YT+LIDGLC + R DDA M+ + M  +G A +   +  LI  
Sbjct: 502 SLVVEMSRKRH-APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVS 560

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPD 639
           +    R   A+  +  M  +G  PD
Sbjct: 561 MSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 216/488 (44%), Gaps = 56/488 (11%)

Query: 182 KKSRVDKALQLFD-KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           + SR D A+Q FD    + G+  D   Y+ ++  L K+       ++Y ++  SG +P+ 
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                LI      G+                        MR L    ++D+         
Sbjct: 63  VTFKILIRGNCKAGQ-----------------------AMRALEFLRALDEF-------- 91

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                             +V+P+   F+++I+ L KDG  D A+ LF  M        + 
Sbjct: 92  ------------------SVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIV 133

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFK--PTHFTLNSMFRCLCRRQDVVGALNLVR 418
            YN +I GLC S  LE++ ELL EM   G K  P   T N++     R   +  A     
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           KM+  G  P V    +L+  +CK G   EA   L  M   G +PD++ Y++ I  L    
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +V  A E+ + +    C PD+V +N ++ G CKA  +  A ++  EM  + ++P V TY 
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +L+NG C+ G +  A   L  ++ ++   PDVI YT+L+DGLC +G  ++A  L  EM  
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIV-RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           +GC    + + +L++G C+      A      M    M P +F +  ++   + + +   
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 659 AFEVLKEM 666
           A  ++ ++
Sbjct: 430 AVSLISDL 437



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 260/593 (43%), Gaps = 43/593 (7%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANML-FDQVKREGLCVPNNYSYNCLLEALC 77
           +D++ S C  SP  + F I   G+    +    L F +   E    P+ Y +N L+  L 
Sbjct: 51  KDLLHSGC--SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLF 108

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW---VD 134
           K  + D      + M+      +  T   ++   C SG  +KA  +  E+I  G     D
Sbjct: 109 KDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPD 168

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
              ++ L+ AF +   + +AC   E+M    I  +  T  +L+ G  K   V++AL++ D
Sbjct: 169 IVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILD 228

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M  +G   D   Y+ II  LC   ++  A ++   M  S   PD    + L+      G
Sbjct: 229 GMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAG 285

Query: 255 ELTLLVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
            L   + E+ E+        DV T T+L N + R+    G +  A+ LL+ +++      
Sbjct: 286 MLPRAL-EVLEEMCRENILPDVITYTILVNGLCRV----GQVQVAFYLLEEIVR------ 334

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + P+  ++  +++ L K G+++ A  L +EM+  GC   V +Y++L+ 
Sbjct: 335 ---------QGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVS 384

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C +  + ++ E+L EM      P  FT N +   L +   +  A++L+  +  +G+ P
Sbjct: 385 GYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVP 444

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V     LI  LCK  +  EA     +M   G  P+ V   + + GL  + RVD A  L 
Sbjct: 445 DVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 504

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
            ++      P+VV Y  +I GLCK+ R+ +A  + + M  +G+      Y  LI      
Sbjct: 505 VEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHG 564

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           G + +AM     M+ +    PD  T  TL +         +++  W  +EE  
Sbjct: 565 GRVAEAMAMYDEMVAR-GFLPDGSTSKTLEEAAM-----SNSVFEWTNLEENA 611


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 189/692 (27%), Positives = 320/692 (46%), Gaps = 71/692 (10%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC-----------------VPNNYSYNC 71
           SP     LI     +G+++EA  +F   K + +                  VPN Y+Y  
Sbjct: 155 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTI 214

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           +   LC++  ++  ++  +EMQ  G   D    + L+  +   G  D+ L + + ++  G
Sbjct: 215 ITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG 274

Query: 132 W-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
             ++   +++L+    K+G+++KA E+++ M     + N +TFC+LI G+ ++  + +AL
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           +L D+M K      A  Y  +I GLC  K L +A +L  +M  SG+ P+  + S LI   
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 251 SDEGELTLLVKEIWEDRDVNTMT--LLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
           + EG +    + + +    + +   + C N+I+  L   G +++A   L           
Sbjct: 395 ASEGRIEE-ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL----------- 442

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                L I    + P+  +F   I    K GK+  A   F EM   G M N  LY  LI+
Sbjct: 443 -----LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 497

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G   +  L E+  + R +   G  P   T ++    L +   V  AL +  +++ +G  P
Sbjct: 498 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   + LI   CK G+  +AF    +M  +G  P+I  Y+A + GL     +  A +LF
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  PD V Y+ +I G CK++ VAEA  LF+EM +KG+ P    YN L++G CK 
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677

Query: 548 GNIDQAMLCLSRMLEKESGS---------------------------------PDVITYT 574
           G++++AM     ML+K   +                                 PD +TYT
Sbjct: 678 GDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T+ID  C AG+ ++A +L+ EM+E+    + +T+ +L+ G  K  +       F  M  K
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+KPD   +  +I A   E N   AF++  E+
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 168/592 (28%), Positives = 271/592 (45%), Gaps = 43/592 (7%)

Query: 97  WGYDKYTLTPLLQV-YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           +G     LT +++  Y +S   D  L  F    ++G     VF IL+ ++ + G +D+A 
Sbjct: 120 FGLANGVLTQMIRTPYSSSSILDSVLFWFR---NYGGSSPVVFDILIDSYKRMGMLDEAA 176

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
                    N+    K   +LI      S           M + G   +   Y +I  GL
Sbjct: 177 ---------NVFFVAKNDSILISLIRCNS--------LRSMGEKGLVPNTYTYTIITAGL 219

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMT 273
           C+ K++  A   + EM+ +G+ PD+   S LI     EG++   L +K++     +    
Sbjct: 220 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 279

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIK------------------GEPIADVGVEML-M 314
           +  N ++  L   G +++A  +L+ MI                    E      +E+L  
Sbjct: 280 ITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 339

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K  + P+  S+  +IN L     L LA  L  +MT  G   NV +Y+ LI G  +  R
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE+  LL  M  SG  P  F  N++  CL +   +  A   + +++ +G +P       
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            I    K GK  EA ++  +M+  G +P+   Y+  I G      +  AL +FR + A G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDV   +  I GL K  RV EA  +F+E+  KGL+P V TY+ LI+G+CK G +++A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M  K   +P++  Y  L+DGLC +G    A  L++ M EKG  P+ +T+  +I G
Sbjct: 580 ELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            CK +    A   F  M  KG++P  FV+ AL+     E +   A  + +EM
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 182/724 (25%), Positives = 312/724 (43%), Gaps = 70/724 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L RA+R+   ++  +++ K+       A   LI      G ++E   + D +   G+ + 
Sbjct: 219 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI- 277

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +YN L+  LCK   ++     LK M   G   +  T   L++ YC      +AL + 
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+     V   V +  ++       ++  A +L+E+M    ++ N   +  LI G+  +
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+++A +L D M+ SG A D   Y+ II  L K  ++E A     E++G G+ PD    
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
              I   S  G++T   K   E  D     L+ N+ +  ++ NG   +A NL++A+    
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLD---HGLMPNNPLYTVLINGHF-KAGNLMEALSIFR 513

Query: 304 PIADVGV---------------------EMLMIF-----KGTVSPNTSSFDIIINTLLKD 337
            +  +GV                     E L +F     KG V P+  ++  +I+   K 
Sbjct: 514 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV-PDVFTYSSLISGFCKQ 572

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+++ A  L  EM   G   N+F+YN L+DGLC S  ++ + +L   M E G +P   T 
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++M    C+ ++V  A +L  +M  +G +P       L+   CK G   +A     +M+Q
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +GF    + ++  I G     ++  A +LF+++ A    PD V Y  +I   CKA ++ E
Sbjct: 693 KGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEE 751

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY---- 573
           A  LF EM  + LI    TY  L+ G+ K G   +      +M+ K    PD +TY    
Sbjct: 752 ANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK-GVKPDEVTYGLVI 810

Query: 574 -------------------------------TTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                            LI  LC      +A  L +EM E G  
Sbjct: 811 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 870

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+      L+    +  +   A   F  +K  G+ PD    + L++  L++ +   A  +
Sbjct: 871 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930

Query: 663 LKEM 666
           +K++
Sbjct: 931 IKQL 934



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 223/505 (44%), Gaps = 25/505 (4%)

Query: 28  MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A+ F    LG    G + EA   FD++   GL +PNN  Y  L+    K+ ++   
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL-MPNNPLYTVLINGHFKAGNLMEA 508

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
               + +   G   D  T +  +     +G+  +AL VF+E+ + G V D   +S L+  
Sbjct: 509 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 568

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F K GEV+KA EL + M    I  N   +  L+ G  K   + +A +LFD M + G   D
Sbjct: 569 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 628

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVK 261
           +  Y  +I G CK++ +  A  L+ EM   G+ P   + + L+  C  EG++     L +
Sbjct: 629 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 688

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E+ +     T++   N+++     +  I +A  L Q MI  +                + 
Sbjct: 689 EMLQKGFATTLSF--NTLIDGYCKSCKIQEASQLFQEMIAKQ----------------IM 730

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++  +I+   K GK++ A  LF+EM +   + +   Y +L+ G     +  E + L
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +M   G KP   T   +    C+  ++V A  L  ++  +G       + LLI  LCK
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                EA + L +M + G  P +   S  +    +  ++D A  +F  + + G  PD   
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMI 526
              +++G        +A +L  +++
Sbjct: 911 LIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 179/625 (28%), Positives = 302/625 (48%), Gaps = 40/625 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VPN Y+Y  +   LC++  ++  ++  +EMQ  G   D    + L+  +   G  D+ L 
Sbjct: 7   VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 66

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + + ++  G  ++   +++L+    K+G+++KA E+++ M     + N +TFC+LI G+ 
Sbjct: 67  IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++  + +AL+L D+M K      A  Y  +I GLC  K L +A +L  +M  SG+ P+  
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMT--LLC-NSIMRILVSNGSIDQAYNLLQA 298
           + S LI   + EG +    + + +    + +   + C N+I+  L   G +++A   L  
Sbjct: 187 VYSTLIMGYASEGRIEE-ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL-- 243

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                         L I    + P+  +F   I    K GK+  A   F EM   G M N
Sbjct: 244 --------------LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPN 289

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
             LY  LI+G   +  L E+  + R +   G  P   T ++    L +   V  AL +  
Sbjct: 290 NPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 349

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +++ +G  P V   + LI   CK G+  +AF    +M  +G  P+I  Y+A + GL    
Sbjct: 350 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 409

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +  A +LF  +   G  PD V Y+ +I G CK++ VAEA  LF+EM +KG+ P    YN
Sbjct: 410 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 469

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L++G CK G++++AM     ML+K  G    +++ TLIDG C + +  +A  L+ EM  
Sbjct: 470 ALVHGCCKEGDMEKAMNLFREMLQK--GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIA 527

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE-----------------KGMKPDMF 641
           K   P+ +T+  +I   CK  +   A + F+ M+E                 KG+KPD  
Sbjct: 528 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEV 587

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  +I A   E N   AF++  E+
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEV 612



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 235/492 (47%), Gaps = 22/492 (4%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M + G   +   Y +I  GLC+ K++  A   + EM+ +G+ PD+   S LI     EG+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 256 L--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK------------ 301
           +   L +K++     +    +  N ++  L   G +++A  +L+ MI             
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 302 ------GEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
                  E      +E+L  + K  + P+  S+  +IN L     L LA  L  +MT  G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV +Y+ LI G  +  R+EE+  LL  M  SG  P  F  N++  CL +   +  A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
             + +++ +G +P        I    K GK  EA ++  +M+  G +P+   Y+  I G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                +  AL +FR + A G  PDV   +  I GL K  RV EA  +F+E+  KGL+P V
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY+ LI+G+CK G +++A      M  K   +P++  Y  L+DGLC +G    A  L++
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M EKG  P+ +T+  +I G CK +    A   F  M  KG++P  FV+ AL+     E 
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 655 NPPLAFEVLKEM 666
           +   A  + +EM
Sbjct: 480 DMEKAMNLFREM 491



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 268/602 (44%), Gaps = 46/602 (7%)

Query: 39  CLGSVGLVEEANM-----LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           CL   G   E NM     L D++++  L VP+  SY  ++  LC    + L    L++M 
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNL-VPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   +    + L+  Y + G+ ++A  + + +   G   D   ++ ++   SK G+++
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A   +  +    ++ +  TF   I G+ K  ++ +A + FD+M   G   +  +Y V+I
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G  K   L  AL ++  +   G+ PD +  S  I      G +   +K   E ++   +
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357

Query: 273 --TLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                 +S++      G +++A+ L   M +KG                 ++PN   ++ 
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-----------------IAPNIFIYNA 400

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ L K G +  A  LF  M + G   +   Y+ +IDG C S  + E++ L  EM   G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P  F  N++    C+  D+  A+NL R+M  +G    +  NTL I   CK  K  EA 
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTL-IDGYCKSCKIQEAS 519

Query: 450 RFLTDMVQEGFLPDIVCYSAAI-----GGLIDIKR------------VDLALELFRDICA 492
           +   +M+ +  +PD V Y+  I      G ++               VD    LF  + A
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PD V Y ++I   CK   + EA  L +E++ KG++     ++LLI   CK  ++ +
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 639

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A   L  M E     P +   +TL+     AG+ D+A  ++  ++  G  P+  T + L+
Sbjct: 640 ASKLLDEMGEL-GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 698

Query: 613 TG 614
            G
Sbjct: 699 NG 700



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/546 (22%), Positives = 236/546 (43%), Gaps = 73/546 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    S G +EEA  L D +   G+  P+ + YN ++  L K+  ++     L E+Q  
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKA 154
           G   D  T    +  Y  +G+  +A   F+E++DHG +  + ++++L+    K G + +A
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +   +    +  + +T    IHG +K  RV +AL++F ++ + G   D   Y  +I G
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTM 272
            CK  ++E A +L+ EM   GI P+  I + L+      G++    K  +   ++ +   
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           ++  ++++     + ++ +A++L   M                 KG V P++  ++ +++
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPS---------------KG-VQPHSFVYNALVH 473

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K+G ++ A++LFREM Q G       +N LIDG C S +++E+ +L +EM      P
Sbjct: 474 GCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 532

Query: 393 THFTL----------------NSMFRCLCRRQDVVGAL-NLVRKMRVQGHEP-------- 427
            H T                 N +F+ +  R  +V  +  L  KM  +G +P        
Sbjct: 533 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLV 592

Query: 428 WVKH---------------------------NTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              H                           + LLI  LCK     EA + L +M + G 
Sbjct: 593 IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL 652

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P +   S  +    +  ++D A  +F  + + G  PD      +++G        +A +
Sbjct: 653 KPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARN 712

Query: 521 LFNEMI 526
           L  +++
Sbjct: 713 LIKQLV 718


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/636 (28%), Positives = 310/636 (48%), Gaps = 31/636 (4%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           L++EA  L   +  +GL VP+ Y+Y+ L+   C        ++ L EM D G   +  T 
Sbjct: 256 LLDEAIELKRSMVDKGL-VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 314

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             L+  +   G  ++A  + +E++  G   +  +++ LL    K G+++KA E+++ M +
Sbjct: 315 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  + +T+ +LI G  +   + +A +L D+M K   A     Y VII GLC+   L+ 
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMR 281
              +  EM  +G+ P+  + + L+T+ + EG  E + ++ E   ++ +       NS++ 
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494

Query: 282 ILVSNGSIDQAYNLLQAMIK--------------------GE-PIADVGV-EMLMIFKGT 319
                  +++A   L  M++                    GE  IAD    EML      
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---G 551

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN   +  +I    K+G +  A S+FR +     +Q+V  Y+ LI GL  + ++ E++
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 611

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +  E++E G  P  FT NS+    C++ +V  A  L+ +M ++G  P +    +LI  L
Sbjct: 612 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 671

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A     D+   G  P+ V Y+A + G    K    A +L  ++   G  PD 
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 731

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN+I++  CK ++  +A DLF EM+ KG   +V ++N LI G+CKSG + +A   L  
Sbjct: 732 FIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEE 790

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+EK+   P+ +TYT+LID  C AG   +A  LW EM+E+   P   T+ +L+ G     
Sbjct: 791 MIEKQF-IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 849

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
                   F  M  KG++PD   +  +I A+  E N
Sbjct: 850 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 885



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 181/691 (26%), Positives = 307/691 (44%), Gaps = 61/691 (8%)

Query: 18  AQDVVKS--RCFMSPGA-LGFLIRCLGSVGLVEEA---NMLFDQVKREGLCV-------- 63
           A D++K   R   SP A LG +++C  S      +   +ML D  ++ G  V        
Sbjct: 120 ASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLG 179

Query: 64  PNNYSY-------NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
           P N+ +       N LL  L K   V+L       M  +    D YT T ++  +C  G 
Sbjct: 180 PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGN 239

Query: 117 -----------------FDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELI 158
                             D+A+ +   ++D G V D + + IL+  F       +A  ++
Sbjct: 240 VKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLML 299

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M D  ++    T+  LI GF+++  +++A ++ D+M   G  ++  +++ ++ G+CK 
Sbjct: 300 LEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 359

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLL 275
            ++E AL++  EM   G+ PD +  S LI   C  +       L+ E+ + R +    L 
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM-KKRKLAPTVLT 418

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + I+  L   G++     +L+ M+                   + PN   +  ++    
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMN----------------GLKPNAVVYTTLMTAHA 462

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G+++ +  +   M + G + +VF YN+LI G C + R+EE+   L EM E   +P   
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  +      +  ++  A     +M   G  P V   T LI+  CK G   EAF     +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +    L D+  YS  I GL    ++  A  +F ++   G  P+   YN +ISG CK   V
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A  L  EM  KG+ P + TYN+LI+G CK+G I++A       +E    +P+ +TY  
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD-IEGRGLTPNCVTYAA 701

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           ++DG C +  P  A  L  EM  +G  P+   +  ++   CK ++   AL  F+ M EKG
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               +  F  LI  +        A  +L+EM
Sbjct: 762 FASTV-SFNTLIEGYCKSGKLQEANHLLEEM 791



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 152/608 (25%), Positives = 283/608 (46%), Gaps = 47/608 (7%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G +E+A  +  ++  +G+  P++ +Y+ L+E  C+  ++      L EM+         
Sbjct: 359 AGKMEKALEIMQEMMEKGV-EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           T + ++   C  G      ++  E++ +G   +  V++ L+ A +K G V+++  ++ERM
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +  I  +   +  LI GF K  R+++A     +M +     +A  Y   I G  K  ++
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--------LLVKEIWEDRDVNTMT 273
           E+A + ++EM   G+ P+  I + LI     EG +T        +L + + +D  V T +
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD--VQTYS 595

Query: 274 LLCNSIMRILVSNGSIDQAYNLL---------------QAMIKG---EPIADVGVEML-- 313
           +L + + R    NG + +A+ +                 ++I G   +   D   ++L  
Sbjct: 596 VLIHGLSR----NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M  KG ++P+  +++I+I+ L K G+++ A +LF ++   G   N   Y  ++DG C S 
Sbjct: 652 MCIKG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
               +++LL EM   G  P  F  N +    C+ +    AL+L ++M  +G    V  NT
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT 770

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I+  CK GK  EA   L +M+++ F+P+ V Y++ I        +  A  L+ ++   
Sbjct: 771 L-IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P    Y  ++ G      ++E   LF EM+ KG+ P   TY ++I+ +C+ GN+ +A
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889

Query: 554 MLCLSRMLEKESGSP-------DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
                 +L K  G P        + T + +  G  IAG  D+A  +   M + G   N  
Sbjct: 890 CKLKDEILVK--GMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 947

Query: 607 TFMALITG 614
           +   L+ G
Sbjct: 948 SLGDLVDG 955



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 262/584 (44%), Gaps = 73/584 (12%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A+ +  L+      G VEE+ M+ ++++ +G+ +P+ + YN L+   CK+  ++  
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI-LPDVFCYNSLIIGFCKAKRMEEA 505

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
              L EM +     + +T    +  Y  +G+ + A   FNE++  G + +  +++ L+  
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G V +A  +   +    +  + +T+ VLIHG  +  ++ +A  +F ++ + G   +
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A  Y+ +I G CK   ++ A QL  EM   GI PD    + LI      GE+    K ++
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER-AKNLF 684

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG-----EPIADVGVEMLMIFKGT 319
           +D +   +T  C +                   AM+ G      P A   +   M+ +G 
Sbjct: 685 DDIEGRGLTPNCVT-----------------YAAMVDGYCKSKNPTAAFQLLEEMLLRG- 726

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+   +++I+N   K+ K + AL LF+EM + G    V  +N LI+G C S +L+E+ 
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEAN 785

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL EM E  F P H T  S+                            + HN       
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSL----------------------------IDHN------- 810

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G   EA R   +M +   +P    Y++ + G  +I  +     LF ++ A G  PD 
Sbjct: 811 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP-------SVATYNLLINGWCKSGNIDQ 552
           + Y ++I   C+   V EA  L +E++ KG+ P        + T +++  G+  +GN+D+
Sbjct: 871 MTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGFRLGLPTCSVIARGFQIAGNMDE 929

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           A   L  M+ K     +  +   L+DG       +D+  L  +M
Sbjct: 930 AAEVLRSMV-KFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/552 (30%), Positives = 279/552 (50%), Gaps = 27/552 (4%)

Query: 112 CNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C S + DKA+++F +++D   + D   +  L+    K   V +A +L E           
Sbjct: 6   CKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTV 65

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
            T+  +I G  K  R++ AL L+D M    GF      Y  +I GLC++ +++   +L  
Sbjct: 66  VTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLE 125

Query: 230 EMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           EM G G  P+    + L+ +   +G      +LL +          +T     I++ L  
Sbjct: 126 EMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITF--GLIIKGLCK 183

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G I+ A+ ++              EM MI  G +SP+  +F+ +++ L K+ ++  A +
Sbjct: 184 EGEIEAAFRVVD-------------EMFMIESG-LSPDVITFNSVLDGLCKEQRILDAHN 229

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +F+   + GC  NV  Y+ LIDGL    +++E+ +LL +M E G +    T +++   L 
Sbjct: 230 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 289

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           +   +  A+ ++R+MR  G  P  V +NTL I    K  +  EA   L +M++ GF P +
Sbjct: 290 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTL-IDGFFKRQRLREAVGLLREMLEAGFHPSV 348

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y+    GL    R D A+E+   + A GC P+ + Y+ I+ GLCKA RV EA   F +
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408

Query: 525 MITKGLI-PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           M    ++ P V  Y+ LI+G CK+G ID+A   L RM+ +    PDV+T++ LI+GLC A
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI-RAGRIPDVVTFSILINGLCDA 467

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR D  + L+  M E+GC P+ +T+  L+  LC+  R   A   F+ M+  G+ PD    
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527

Query: 644 VALISAFLSELN 655
             +I   L E+N
Sbjct: 528 RTMIHGLL-EVN 538



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 244/558 (43%), Gaps = 87/558 (15%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K  +VDKA  L ++M D  I  +  T+  LI G  K+ RV +A  LF++    G      
Sbjct: 7   KSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 66

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            Y+ +I GLCK  ++E AL LY +M    G  P     S LI                  
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDG---------------- 110

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                            L  +  +D+   LL+ M      A  G           +PN  
Sbjct: 111 -----------------LCRDHEVDKGCKLLEEM------AGRGC----------APNAV 137

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +++ ++N LL  G+   A SL  +M   GC   +  +  +I GLC    +E ++ ++ EM
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 197

Query: 386 E--ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
              ESG  P   T NS+   LC+ Q ++ A N+ ++   +G  P V   + LI  L K  
Sbjct: 198 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 257

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA + L  MV+ G   + V YS  + GL+ + R++ A+ + R +   GC PD V YN
Sbjct: 258 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 317

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM--------- 554
            +I G  K QR+ EA  L  EM+  G  PSV TY  L +G C+SG  D+A+         
Sbjct: 318 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 377

Query: 555 ---------------LC-----------LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
                          LC             +M   E  +P VI Y+ LIDGLC AG+ D+
Sbjct: 378 GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDE 437

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A      M   G  P+ +TF  LI GLC   R    L  FR M E+G  PDM  +  L+ 
Sbjct: 438 AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVD 497

Query: 649 AFLSELNPPLAFEVLKEM 666
                     AF++ ++M
Sbjct: 498 RLCRASRVDEAFDLFQQM 515



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/599 (26%), Positives = 279/599 (46%), Gaps = 62/599 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L ++R++     L + +V    +      G LI  LG    V+EA  LF++ + +G C P
Sbjct: 5   LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG-CHP 63

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN +++ LCK                                    G+ + AL+++
Sbjct: 64  TVVTYNTMIDGLCKC-----------------------------------GRIENALTLY 88

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           +++  H      V  +S L+    +  EVDK C+L+E M       N  T+  L++  + 
Sbjct: 89  DDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG 148

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDF 240
           + R  +A  L ++M  +G   +   + +II GLCK  ++E A ++  EM    SG++PD 
Sbjct: 149 QGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208

Query: 241 EILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              + ++     E  + L    +++   +R      +  ++++  L     +D+A  LL 
Sbjct: 209 ITFNSVLDGLCKEQRI-LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+      ++G             NT ++  +++ LLK G+++ A+ + R+M   GC+ 
Sbjct: 268 KMV------ELGCR----------ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 311

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   YN LIDG     RL E+  LLREM E+GF P+  T  ++   LCR      A+ ++
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ-EGFLPDIVCYSAAIGGLID 476
             M  +G  P     + ++  LCK G+  EA  +   M + E   P ++ YSA I GL  
Sbjct: 372 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             ++D A E    +   G  PDVV ++I+I+GLC A R+    +LF  M  +G +P + T
Sbjct: 432 AGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVT 491

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           Y  L++  C++  +D+A     +M   +  SPD  T  T+I GL    R +DA  + +E
Sbjct: 492 YATLVDRLCRASRVDEAFDLFQQM-RSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 173/340 (50%), Gaps = 4/340 (1%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ L K  K+D A++LF++M       +V  Y  LIDGL    R++E+Y+L  E    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEA 448
             PT  T N+M   LC+   +  AL L   M +  G  P V   + LI  LC+  +  + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            + L +M   G  P+ V Y+  +  L+   R   A  L   + A+GC P+++ + +II G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 509 LCKAQRVAEAEDLFNE--MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           LCK   +  A  + +E  MI  GL P V T+N +++G CK   I  A     R LE+   
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER-GC 239

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+V+TY+TLIDGL    + D+A+ L  +M E GC  N +T+  ++ GL K  R   A+V
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             R M++ G  PD   +  LI  F        A  +L+EM
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 180/642 (28%), Positives = 297/642 (46%), Gaps = 69/642 (10%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           +I P      +V+K+ C                VG V +  M+  ++++E  C PN ++Y
Sbjct: 237 KIVPDVYTYTNVIKAHC---------------KVGDVIKGKMVLSEMEKE--CKPNLFTY 279

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N  +  LC++ +VD      K M + G G D +T T L+  +C   +  +A  +F  +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G   +   ++ L+  F K G +++A  + + M    ++LN  T+  +I G  K   + K
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ LF++M  +G   D   Y+++I G  K+  +  A +L +EMK   +TP     S LI+
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                     LC+S          + +A  +L  MI+       
Sbjct: 460 G-------------------------LCHS--------SDLQKANEVLDQMIRN------ 480

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                      V PN   +  +I   +++ + ++A+ L + M   G + ++F YN LI G
Sbjct: 481 ----------GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC + ++EE+  LL +M E G KP   T  +      +  ++  A    + M   G  P 
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+LIK  C  G  +EA      M+++G +PDI  YSA I  L    +   A+ +F 
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
                G  PDV  YN +ISG CK   + +A  L++EM+  G+ P++  YN LING CK G
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + +A      + EK+   PDV+TY+T+IDG C +G   +A  L++EM  KG +P+   +
Sbjct: 711 EVTKARELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             LI G  K      AL  F   ++K +   +  F +LI +F
Sbjct: 770 CILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSF 810



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 190/666 (28%), Positives = 302/666 (45%), Gaps = 64/666 (9%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGF---LIRCLGSVGLVEEANM--LFDQVKR---EGLC 62
           I   RVL      S  F++  + GF   LI C   +  + +ANM  LF +V     E   
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+ Y+Y  +++A CK   V   +M L EM+      + +T    +   C +G  D+AL 
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +++ G   D H +++L+  F K     +A  + E M    +  N  T+  LI GF+
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+  +++AL++ D+M   G   +   Y+ +IGG+ K  ++  A+ L++EM  +G+ PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPD-- 415

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMI 300
                                 W                            YNLL    +
Sbjct: 416 ---------------------TW---------------------------TYNLLIDGYL 427

Query: 301 KGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           K   +A    E+L   K   ++P+  ++ ++I+ L     L  A  +  +M + G   NV
Sbjct: 428 KSHDMAK-ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F+Y  LI      +R E + ELL+ M  +G  P  F  N +   LCR + V  A  L+  
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +P        I    K G+   A R+  DM+  G +P+ V Y+  I G  D+  
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              AL  F+ +   G  PD+ AY+ II  L K  +  EA  +F + +  G++P V  YN 
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI+G+CK G+I++A      ML     +P+++ Y TLI+GLC  G    A  L++E+EEK
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHN-GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
              P+ +T+  +I G CK      A   F  M  KG+ PD +++  LI     E N   A
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785

Query: 660 FEVLKE 665
             +  E
Sbjct: 786 LSLFHE 791



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 177/646 (27%), Positives = 306/646 (47%), Gaps = 33/646 (5%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK-EMQDYGWGYDKYTLT 105
           +EA ++F+ +   GL  PN ++Y  L++   K  +++   +R+K EM   G   +  T  
Sbjct: 328 KEAKLIFESMPSSGLN-PNRFTYTALIDGFIKEGNIEEA-LRIKDEMITRGLKLNVVTYN 385

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            ++     +G+  KA+S+FNE++  G   D   +++L+  + K  ++ KACEL+  M   
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  +  T+ VLI G    S + KA ++ D+M ++G   +  MY  +I    +  + EMA
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 225 LQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           ++L   M  +G+ PD    + LI          E  +L+ ++ E + +        + + 
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE-KGIKPNAHTYGAFIN 564

Query: 282 ILVSNGSIDQAYNLLQAM---------------IKGEPIADVG--VEMLMIFKGTVS--- 321
           +   +G I  A    + M               IKG    DVG  VE L  FK  +    
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH--CDVGNTVEALSTFKCMLEKGL 622

Query: 322 -PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  ++  II++L K+GK   A+ +F +  + G + +VFLYN+LI G C    +E++ +
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM  +G  P     N++   LC+  +V  A  L  ++  +   P V   + +I   C
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYC 742

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G   EAF+   +M+ +G  PD   Y   I G      ++ AL LF +         + 
Sbjct: 743 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLS 801

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           A+N +I   CK  +V EA +LF++M+ K L P++ TY +LI+ + K+  +++A      M
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 861

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            E  +  P+ +TYT+L+      G     I L+ +ME +G A + I +  + +  CK  +
Sbjct: 862 -ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL        +G+K +  VF ALI     E       E+L EM
Sbjct: 921 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 966



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 251/536 (46%), Gaps = 22/536 (4%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           D + ++ ++ A  K G+V K   ++  M+ +C  + N  T+   I G  +   VD+AL++
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC--KPNLFTYNAFIGGLCQTGAVDEALEV 298

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
              M + G   D   Y +++ G CK K+ + A  ++  M  SG+ P+    + LI     
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358

Query: 253 EG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           EG  E  L +K+    R +    +  N+++  +   G + +A +L               
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN------------- 405

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           EMLM     + P+T +++++I+  LK   +  A  L  EM       + F Y+ LI GLC
Sbjct: 406 EMLM---AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC 462

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           +S+ L+++ E+L +M  +G KP  F   ++ +   +      A+ L++ M   G  P + 
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI  LC+  K  EA   L DM ++G  P+   Y A I        + +A   F+D+
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            + G  P+ V Y I+I G C      EA   F  M+ KGLIP +  Y+ +I+   K+G  
Sbjct: 583 LSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +AM    + L K    PDV  Y +LI G C  G  + A  L++EM   G  PN + +  
Sbjct: 643 KEAMGVFLKFL-KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNT 701

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI GLCK      A   F  ++EK + PD+  +  +I  +    N   AF++  EM
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 260/571 (45%), Gaps = 44/571 (7%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMD----------DCNIRL-------NEKTFCVLIH 178
           H +SIL +     G + +A  ++E++           D  +R        N   F + I 
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            F     +++A  +F      GF       + ++  L K   + +  ++Y  M  + I P
Sbjct: 181 KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 239 DFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D    + +I +    G++    +++ E+ ++   N  T   N+ +  L   G++D+A  +
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTY--NAFIGGLCQTGAVDEALEV 298

Query: 296 LQAMIKGEPIADVGV---------------EMLMIFKGTVS----PNTSSFDIIINTLLK 336
            + M++     D                  E  +IF+   S    PN  ++  +I+  +K
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +G ++ AL +  EM   G   NV  YN +I G+  +  + ++  L  EM  +G +P  +T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +     +  D+  A  L+ +M+ +   P     ++LI  LC      +A   L  M+
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P++  Y   I   +   R ++A+EL + + A+G  PD+  YN +I GLC+A++V 
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTT 575
           EA+ L  +M  KG+ P+  TY   IN + KSG I  A      ML   SG  P+ + YT 
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML--SSGIVPNNVIYTI 596

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI G C  G   +A+  +  M EKG  P+   + A+I  L K  + + A+  F    + G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + PD+F++ +LIS F  E +   A ++  EM
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 193/422 (45%), Gaps = 40/422 (9%)

Query: 264 WEDRDVNTMTLLCN-SIMRI-LVSNGSIDQAYNLLQAMIKG-EPIADVGVEMLMIFKGTV 320
           W    ++T   L + SI+ I L ++G I QA N+L+ +++  +P  ++   ++  ++   
Sbjct: 109 WSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFG 168

Query: 321 SPNTSSFDIIINT-----------------------------------LLKDGKLDLALS 345
             N + FDI I+                                    LLK   + L   
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           ++  M +   + +V+ Y N+I   C    + +   +L EME+   KP  FT N+    LC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLC 287

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  AL + + M  +G  P     TLL+   CK  ++ EA      M   G  P+  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A I G I    ++ AL +  ++   G   +VV YN +I G+ KA  +A+A  LFNEM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  GL P   TYNLLI+G+ KS ++ +A   L+ M  ++  +P   TY+ LI GLC +  
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL-TPSPFTYSVLISGLCHSSD 466

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A  + ++M   G  PN   +  LI    +  R   A+   ++M   G+ PD+F +  
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 646 LI 647
           LI
Sbjct: 527 LI 528



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 104/266 (39%), Gaps = 71/266 (26%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G V +A  LFD+++ + L VP+  +Y+ +++  CKS ++        EM   
Sbjct: 702 LINGLCKLGEVTKARELFDEIEEKDL-VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISK 760

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNE--------------IID----HGWVDEH- 136
           G   D Y    L+      G  +KALS+F+E              +ID    HG V E  
Sbjct: 761 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAR 820

Query: 137 ----------------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
                            ++IL+ A+ K   +++A +L   M+  NI  N  T+  L+  +
Sbjct: 821 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 880

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMY-------------------------------- 208
            +     K + LF  M   G A DA  Y                                
Sbjct: 881 NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 940

Query: 209 ---DVIIGGLCKNKQLEMALQLYSEM 231
              D +I  LCK KQ+   L+L SEM
Sbjct: 941 DVFDALIFHLCKEKQISTVLELLSEM 966



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 7/209 (3%)

Query: 10   RIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
            ++   R L  D+V  +  ++P  + +  LI   G   ++EEA  LF  ++   + +PN  
Sbjct: 815  KVIEARELFDDMVDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI-IPNTL 871

Query: 68   SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            +Y  LL +  +  +   +    K+M+  G   D      +   YC  G+  +AL + N+ 
Sbjct: 872  TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 128  IDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            +  G  +++ VF  L+    K  ++    EL+  M    + L+ KT   L+ GF K    
Sbjct: 932  LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 991

Query: 187  DKALQLFDKMTKSGFASDA-AMYDVIIGG 214
            D+A ++   M + G+   + ++ D I  G
Sbjct: 992  DEASKVLGVMQRLGWVPTSLSLTDSISTG 1020


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 284/535 (53%), Gaps = 21/535 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S ++    K G+V +A E++E M +  +  +  T+ +++    +  +VD+A +LF KM
Sbjct: 12  TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            + G +++   Y+ +I GLCK++ +E A +L  EM   G  PD    + +++     G++
Sbjct: 72  IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131

Query: 257 TLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           +   K+ ++    R  +   +  N ++  L   G + +A+ L + M     +AD      
Sbjct: 132 SE-AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM----DMAD------ 180

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                 V+P+  +++ +I+   +  K D A+ LF+++   G M +   YN+++ GL   +
Sbjct: 181 ----RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++E+ E+ ++M +SG  P   T + +    CR  ++   L L  +M  +   P V    
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I  LCK  K  +A + L +M + G +PD+V Y+  + GL     VD A ELF  +  +
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PD+V+Y+++++GLCK  +V +A  LF+ MI + L+P V T+N+L++G CK+G +D+A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L  M E  +  PD +T TTL+ GLC   R D+A+ L+  M EKG   + +    ++ 
Sbjct: 417 KDLLDVMSE-HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475

Query: 614 GLCKCDRPRAALVHFR-MMKEKG-MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLC+  +   AL+ F+ M+K  G   PD+  +  L++A +       A +  ++M
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQM 530



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/579 (27%), Positives = 279/579 (48%), Gaps = 33/579 (5%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M + G+  D  T + ++   C +G+  +AL +  E+ + G   D   ++I++    + G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VD+A EL  +M +     N   +  LI+G  K   +++A +L ++M   G+  D   Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW------ 264
           I+ GLC+  ++  A Q +  M   G +PD    + L+ +   EG+    V E W      
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK----VAEAWGLFKTM 176

Query: 265 --EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV------------ 310
              DR V    +  N+++         D+A  L + +I    + D               
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 311 ---EMLMIFKGTV----SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
              E   +FK  V    +PN +++ I+++   + G +   L L+ EMT+     +V L N
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +ID LC + ++++++++L EM + G  P   T N +   LC+   V  A  L   M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +   ++++  LCK  K  +A      M++   +PD+V ++  + GL    ++D A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            +L   +  H   PD V    ++ GLC+ +R  EA  LF  M+ KG +  V  +N+++ G
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 544 WCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            C+ G + QA+L    M++ +   SPDV+TYTTL++ L  AGR D A+  + +M   GCA
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           P+ + +  L+ GL K  R   A    + MKEKG   D F
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 255/515 (49%), Gaps = 29/515 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+EA+ LF ++   G C  N  +YN L+  LCK  +++     L+EM   G+  D  T
Sbjct: 59  GKVDEADELFHKMIERG-CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              +L   C  G+  +A   F+ +   G+  + V ++ LL A  K G+V +A  L + MD
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 163 --DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
             D  +  +  T+  LI GF +  + D+A++LF  +   G+  D   Y+ I+ GL +   
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCN 277
           ++ A +++ +M  SG  P+    S +++     G +     L +E+ E R  +   LLCN
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR-FSPDVLLCN 296

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM---------------IFKGTV-- 320
           +++ +L     +D A+ +L+ M K   + DV    ++               +F   V  
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 321 --SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
             +P+  S+ +++N L K  K+  A  LF  M +   + +V  +N L+DGLC + +L+E+
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            +LL  M E    P   T  ++   LCR +    A+ L + M  +G    V  + +++  
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 439 LCKHGKAMEAFRFLTDMVQEG--FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           LC+ GK  +A  F   MV+    F PD+V Y+  +  LI+  RVD A++ F+ +   GC 
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           PD VAYN +++GL K  R  +A+ L   M  KG +
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 189/401 (47%), Gaps = 73/401 (18%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++  II+ L K GK+  AL +  EMT+ G   +V  Y  ++D LC + +++E+ EL
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELC 440
             +M E G        N++   LC+ +++  A  L+ +M  +G+EP  + +NT+L   LC
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTIL-SGLC 126

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSA------------------------------- 469
           + GK  EA +F   M   G+ PD+V Y+                                
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 470 ------AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
                  I G   +++ D A++LF+D+ A G  PD V YN I+ GL +   + EAE++F 
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------------- 564
           +M+  G  P+ ATY+++++G C+ GN+ + +     M EK                    
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306

Query: 565 ---------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
                             PDV+TY  L+DGLC     D A  L++ M + GCAP+ +++ 
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++ GLCK ++   A V F  M E+ + PD+  F  L+   
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 159/319 (49%), Gaps = 3/319 (0%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G   +V  Y+ +I GLC + ++ E+ E++ EM E G  P   T   +   LCR   
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  L  KM  +G          LI  LCK      A++ L +M  +G+ PD + Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN--EMIT 527
            + GL  + +V  A + F  + + G  PDVVAYN ++  L K  +VAEA  LF   +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           + + P + TYN LI+G+C+    D+AM     ++ K    PD +TY +++ GL      D
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMD 239

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  ++ +M + GCAPN  T+  +++G C+       L  +  M EK   PD+ +  A+I
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 648 SAFLSELNPPLAFEVLKEM 666
                      A +VL+EM
Sbjct: 300 DMLCKAKKVDDAHKVLEEM 318


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 209/714 (29%), Positives = 321/714 (44%), Gaps = 86/714 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEA-----NMLFDQVKRE 59
           L    RI+    L   + K  C     A G L++ L   G +  A      ML D  +  
Sbjct: 55  LCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG 114

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
             C P   SY+ +++ LCK    D      KEM+  G   D  + T L+  +C SG+++K
Sbjct: 115 IKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEK 174

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A  +FNE++D G   D    S+L+    K G+V +A EL+E M      L+  T+  LI 
Sbjct: 175 AKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIK 234

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM------K 232
           G   K R+ +A +LF  M K G   DA  Y  ++ GLC+   +  ALQL+ EM       
Sbjct: 235 GLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRY 294

Query: 233 GSGITPDFEILSKLITS-CSD--EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSN 286
           G    P     S +I   C D  E E   L KE+       DV + T L +        +
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG----FCLS 350

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G  ++A  L   M+      DVG++          P+ ++  ++I+ L K GK+  A  L
Sbjct: 351 GKWEKAKCLFNEML------DVGIQ----------PDVTTSSVLIDMLCKKGKVIEANKL 394

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              + Q GC+ +V     L+ GLC  +R+ ++ +L  +M++ G  P   T  ++ + LC+
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454

Query: 407 RQDVVGALNL-----------------------------------------VRKMRVQGH 425
             ++  AL L                                          ++M+  G 
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P V   T LI   C+ GK  +A     +MV  G  PD+  +S  I  L    +V  A E
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L   +   GC P+ V Y  ++ GLC   R++EA  LF +M   G +P V TY  L+ G C
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 546 KSGNIDQAMLCLSRMLEKESGS------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           ++GNI  A+    +ML  ++G       PDVI+Y+ +IDGLC  GR D+A  L+ EM+  
Sbjct: 635 QTGNIKTALELHKKMLS-DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 693

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           G  PN I++ +LI G C+  +   A   F  M ++G++ +   +  +I  F  E
Sbjct: 694 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 747



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 193/663 (29%), Positives = 310/663 (46%), Gaps = 58/663 (8%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + +V+  C +       LI+ L     + EA  LF  +K+ G C P+  +Y  L++ L
Sbjct: 32  LLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG-CRPDAIAYGTLMKGL 90

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYD---KYTLTP---LLQVYCNSGQFDKALSVFNEIIDH 130
           C++  +++     +EM +    Y    K TL     ++   C   + D+A  +F E+   
Sbjct: 91  CQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQ 150

Query: 131 GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G + + + ++ L+  F + G+ +KA  L   M D  IR +  T  +LI    K+ +V +A
Sbjct: 151 GMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEA 210

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
            +L + M + G   D   Y  +I GLC   ++  A +L+  M+  G  PD          
Sbjct: 211 NELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPD---------- 260

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                                   +   ++M+ L   G+I+ A  L Q M+      D G
Sbjct: 261 -----------------------AIAYGTLMKGLCQTGNINTALQLHQEMLN-----DTG 292

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                 +     P   S+ III+ L KD + D A  LF+EM   G M +V  Y  LI G 
Sbjct: 293 R-----YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C S + E++  L  EM + G +P   T + +   LC++  V+ A  L+  +  +G  P V
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDV 407

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR- 488
              T L+K LC   +  +A +    M + G +P++V  +  + GL     + +ALEL + 
Sbjct: 408 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 467

Query: 489 ---DICAHG--CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
              D   +G  C P+ ++Y+III GLCK  R  EA +LF EM   G+IP V +Y  LI+G
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +C+SG    A    + M++     PDV T++ LID LC  G+  +A  L   M ++GC P
Sbjct: 528 FCRSGKWKDAKYLFNEMVDI-GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+  L+ GLC  DR   A   F  M++ G  PD+  +  L+       N   A E+ 
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 646

Query: 664 KEM 666
           K+M
Sbjct: 647 KKM 649



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 170/578 (29%), Positives = 276/578 (47%), Gaps = 29/578 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L   G V EAN L + + + G C+ +  +Y+ L++ LC    +         MQ 
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRG-CILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHV------FSILLVAFSK 147
            G   D      L++  C +G  + AL +  E++ D G            +SI++    K
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               D+A EL + M    I  +  ++  LIHGF    + +KA  LF++M   G   D   
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
             V+I  LCK  ++  A +L   +   G  PD    + L+     +  ++   +   + +
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434

Query: 268 DVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +  M   + C ++M+ L  +G+I  A  L + M+     +  G+           PN  
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML--SDTSPYGI--------NCKPNAI 484

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S+ III+ L K G+ D A  LF+EM  +G + +V  Y +LI G C S + +++  L  EM
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            + G +P   T + +   LC+   V+ A  L+  M  +G  P     T L+K LC + + 
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR----DICAHGCC--PDV 499
            EA +    M + G LPD+V Y   + GL     +  ALEL +    D   +G    PDV
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++Y+III GLCK  R  EA +LF EM   G+IP+V +Y  LI+G+C+SG ++ A    + 
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           M++ +    + +TY+ +I G C  G+ D A  L+ +ME
Sbjct: 725 MVD-QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 272/571 (47%), Gaps = 71/571 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQV----KREG 60
           L    RI+    L   + K  C     A G L++ L   G +  A  L  ++     R G
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 61  L-CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           + C P   SY+ +++ LCK    D      KEM+  G   D  + T L+  +C SG+++K
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A  +FNE++D G   D    S+L+    K G+V +A +L+E +       +  T   L+ 
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM------K 232
           G   K R+ KA QLF KM K G   +      ++ GLC++  +++AL+L+  M       
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 233 GSGITPD---FEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSN 286
           G    P+   + I+   +  C  E E   L KE+       DV + T L +   R    +
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCR----S 531

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G    A  L   M+      D+GV+          P+ ++F ++I+ L K+GK+  A  L
Sbjct: 532 GKWKDAKYLFNEMV------DIGVQ----------PDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M Q GC+ N   Y  L+ GLC ++R+ E+ +L  +M++ G  P   T  ++ + LC+
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG--FLPDI 464
             ++  AL L +KM                               L+D  Q G  F PD+
Sbjct: 636 TGNIKTALELHKKM-------------------------------LSDTGQYGTNFKPDV 664

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + YS  I GL    R D A ELF+++ A G  P+V++Y  +I G C++ ++ +A+ LFNE
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           M+ +G+  +  TY+++I+G+CK G ID+A+ 
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 755



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 201/440 (45%), Gaps = 51/440 (11%)

Query: 277 NSIMRILVSNG---SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           N ++ ++V  G    I     L++ +     I++     + + K    P+  ++  ++  
Sbjct: 30  NELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 89

Query: 334 LLKDGKLDLALSLFREM----TQIG--CMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           L + GK+++AL L +EM    +Q G  C   +  Y+ +IDGLC   R +E+ EL +EM+ 
Sbjct: 90  LCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKA 149

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P   +  S+    CR      A  L  +M   G    V  +++LI  LCK GK +E
Sbjct: 150 QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIE 209

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA------ 501
           A   L  M+Q G + DIV YS  I GL    R+  A  LF  +   GC PD +A      
Sbjct: 210 ANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMK 269

Query: 502 -----------------------------------YNIIISGLCKAQRVAEAEDLFNEMI 526
                                              Y+III GLCK +R  EA +LF EM 
Sbjct: 270 GLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 329

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            +G++P V +Y  LI+G+C SG  ++A    + ML+     PDV T + LID LC  G+ 
Sbjct: 330 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD-VGIQPDVTTSSVLIDMLCKKGKV 388

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +A  L   + ++GC P+ +T   L+ GLC   R   A   F  M++ G  P++     L
Sbjct: 389 IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           +       N  +A E+ K M
Sbjct: 449 MKGLCQSGNIKIALELHKNM 468



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 163/329 (49%), Gaps = 13/329 (3%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M  +G   +V     LID  C   ++ E+ ELL  M + G      T +++ + LC +  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF----LTDMVQEGF--LPD 463
           +  A  L   M+  G  P       L+K LC+ GK   A       L D  Q G    P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V YS  I GL   +R D A ELF+++ A G  PDV++Y  +I G C++ +  +A+ LFN
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM+  G+   V T ++LI+  CK G + +A   L  M+++     D++TY+TLI GLC+ 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR-GCILDIVTYSTLIKGLCMK 239

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGM-----K 637
            R  +A  L+  M++ GC P+ I +  L+ GLC+      AL +H  M+ + G      K
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCK 299

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  +  +I     +     A E+ KEM
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEM 328


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 272/587 (46%), Gaps = 86/587 (14%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+++F E++        + FS LL A +K  + D    L E+M +  I  N  T+ 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +L++ F ++S++  AL +  KM K G+  D      ++ G C  K++  A+ L  +M   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD                                 T+  N+++  L  +    +A  
Sbjct: 181 GYKPD---------------------------------TVTFNTLIHGLFLHNKASEAVA 207

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M+                +G   P+  ++  ++N L K G +DLALSL ++M +  
Sbjct: 208 LIDRMVA---------------RG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 251

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV +YN +IDGLC    ++++++L  +ME  G KP  FT NS+  CLC       A 
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V     LI    K GK +EA +   +M+Q    P+IV Y++ I G 
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI--- 531
               R+D A ++F  + +  C PDVV YN +I G CKA+RV E  +LF EM  +GL+   
Sbjct: 372 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431

Query: 532 --------------------------------PSVATYNLLINGWCKSGNIDQAMLCLSR 559
                                           P + TY++L++G CK G +++A++    
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-E 490

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L+K    P++ TY  +I+G+C AG+ +D   L+  +  KG  PN I +  +I+G C+  
Sbjct: 491 YLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 550

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A   FR MKE G  PD   +  LI A L + +   + E++KEM
Sbjct: 551 LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 260/539 (48%), Gaps = 24/539 (4%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN-YSYNCLLE 74
            L  ++VKSR F S      L+  +  +   +    L +Q++  G  +P+N Y+Y+ LL 
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--IPHNHYTYSILLN 124

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             C+   + L    L +M   G+  D  TL+ LL  YC+  +  +A+++ +++++ G+  
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + V F+ L+       +  +A  LI+RM     + +  T+  +++G  K+  +D AL L 
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            KM K    ++  +Y+ II GLCK K ++ A  L+++M+  GI PD    + LI+   + 
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 254 G---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           G   + + L+ ++ E R +N   +  NS++      G + +A  L   MI+         
Sbjct: 305 GRWSDASRLLSDMIE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-------- 355

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                   ++ PN  +++ +IN      +LD A  +F  M    C+ +V  YN LI G C
Sbjct: 356 --------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            + R+EE  EL REM + G      T N++ + L +  D   A  + +KM   G  P + 
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             ++L+  LCK+GK  +A      + +    P+I  Y+  I G+    +V+   +LF  +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
              G  P+V+ Y  +ISG C+     EA+ LF EM   G +P    YN LI    + G+
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 586



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 36/367 (9%)

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           L + KLD A++LF EM +     ++  ++ L+  +   N+ +    L  +M+  G    H
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T + +  C CRR  +  AL ++ KM   G+EP +   + L+   C   +  EA   +  
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 176

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA-- 512
           MV+ G+ PD V ++  I GL    +   A+ L   + A GC PD+  Y  +++GLCK   
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236

Query: 513 ---------------------------------QRVAEAEDLFNEMITKGLIPSVATYNL 539
                                            + + +A DLFN+M TKG+ P V TYN 
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI+  C  G    A   LS M+E++  +P+V+T+ +LID     G+  +A  L++EM ++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
              PN +T+ +LI G C  DR   A   F +M  K   PD+  +  LI  F         
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415

Query: 660 FEVLKEM 666
            E+ +EM
Sbjct: 416 MELFREM 422



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 29/351 (8%)

Query: 36  LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LI CL + G   +A+ +L D ++R+    PN  ++N L++A  K   +   E    EM  
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                +  T   L+  +C   + D+A  +F  ++    + + V ++ L+  F K   V++
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             EL   M    +  N  T+  LI G  +    D A ++F KM   G   D   Y +++ 
Sbjct: 415 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 474

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK  +LE AL ++  ++ S + P+    + +I      G+    V++ W+        
Sbjct: 475 GLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK----VEDGWD-------- 522

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK-----GTVSPNTSSFD 328
           L C+  ++ +  N  I         MI G     +  E   +F+     GT+ P++  ++
Sbjct: 523 LFCSLSLKGVKPNVII------YTTMISGFCRKGLKEEADALFREMKEDGTL-PDSGCYN 575

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            +I   L+DG    +  L +EM   G + +    + +I+ L +  RLE+SY
Sbjct: 576 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 625



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 39/231 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+       VEE   LF ++ + GL V N  +YN L++ L ++   D+ +   K+M   
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDK 153
           G   D  T + LL   C  G+ +KAL VF E +    ++ ++++  I++    K G+V+ 
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVF-EYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG------------- 200
             +L   +    ++ N   +  +I GF +K   ++A  LF +M + G             
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579

Query: 201 ----------------------FASDAAMYDVIIGGLCKNKQLEMALQLYS 229
                                 F  DA+   ++I  L   +  +  L++ S
Sbjct: 580 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 630


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 191/661 (28%), Positives = 301/661 (45%), Gaps = 49/661 (7%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            G L     + G +EEA  +F      GL  VP       LL+AL +   +DL     K 
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSS--SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQF---------------------DKALSVFNEIIDH 130
           M +    +D  T   L+  +C +G                       D AL +   +I  
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 131 GWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G V  ++ + +L+    K   ++ A  L+  MD   + L+  T+ +LI G +K    D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             L  +M   G      MYD  I  + K   +E A  L+  M  SG+ P  +  + LI  
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              E  +     LLV+   + R++        ++++ + S+G +D AYN+++ MI     
Sbjct: 392 YCREKNVRQGYELLVE--MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS--- 446

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           PN   +  +I T L++ +   A+ + +EM + G   ++F YN+L
Sbjct: 447 -------------GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I GL  + R++E+   L EM E+G KP  FT  +         +   A   V++MR  G 
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P     T LI E CK GK +EA      MV +G L D   Y+  + GL    +VD A E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +FR++   G  PDV +Y ++I+G  K   + +A  +F+EM+ +GL P+V  YN+L+ G+C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +SG I++A   L  M  K    P+ +TY T+IDG C +G   +A  L++EM+ KG  P+ 
Sbjct: 674 RSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             +  L+ G C+ +    A+  F   K KG       F ALI+         L  EVL  
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNR 791

Query: 666 M 666
           +
Sbjct: 792 L 792



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 58/632 (9%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP  Y+Y+ L++ LCK   ++  +  L EM   G   D +T + L+         D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +E++ HG  +  +++   +   SK G ++KA  L + M    +    + +  LI G+ 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++  V +  +L  +M K         Y  ++ G+C +  L+ A  +  EM  SG  P+  
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 242 ILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           I + LI +    S  G+   ++KE+ E + +       NS++  L     +D+A + L  
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M++                  + PN  ++   I+  ++  +   A    +EM + G + N
Sbjct: 513 MVEN----------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
             L   LI+  C   ++ E+    R M + G      T   +   L +   V  A  + R
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +MR +G  P V    +LI    K G   +A     +MV+EG  P+++ Y+  +GG     
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A EL  ++   G  P+ V Y  II G CK+  +AEA  LF+EM  KGL+P    Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 539 LLINGWCKSGNIDQAML----------------------------------CLSRMLE-- 562
            L++G C+  ++++A+                                    L+R+++  
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 563 -KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
               G P+ +TY  +ID LC  G  + A  L+++M+     P  IT+ +L+ G  K  R 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                 F      G++PD  ++  +I+AFL E
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 160/673 (23%), Positives = 280/673 (41%), Gaps = 64/673 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + R     + L  ++V     + P      I  +   G++E+A  LFD +   GL +P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL-IP 380

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y  L+E  C+  +V      L EM+        YT   +++  C+SG  D A ++ 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI- 439

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                                            ++ M     R N   +  LI  F++ S
Sbjct: 440 ---------------------------------VKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R   A+++  +M + G A D   Y+ +I GL K K+++ A     EM  +G+ P+     
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
             I+   +  E     K + E R+   +   +LC  ++      G + +A +  ++M+  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + D                  ++ +++N L K+ K+D A  +FREM   G   +VF Y
Sbjct: 587 GILGD----------------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LI+G      ++++  +  EM E G  P     N +    CR  ++  A  L+ +M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P       +I   CK G   EAFR   +M  +G +PD   Y+  + G   +  V+ 
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL----IPSVATYN 538
           A+ +F      GC      +N +I+ + K  +     ++ N ++         P+  TYN
Sbjct: 751 AITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I+  CK GN++ A     +M +  +  P VITYT+L++G    GR  +   +++E   
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-----GMKPDMFVFVALISAFLSE 653
            G  P+ I +  +I    K      ALV    M  K     G K  +    AL+S F   
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 654 LNPPLAFEVLKEM 666
               +A +V++ M
Sbjct: 929 GEMEVAEKVMENM 941



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 235/576 (40%), Gaps = 69/576 (11%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K    +SP   G +++ + S G ++ A  +  ++   G C PN   Y  L++   ++   
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRF 468

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
                 LKEM++ G   D +    L+     + + D+A S   E++++G   +   +   
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSG 200
           +  + +  E   A + ++ M +C + L  K  C  LI+ + KK +V +A   +  M   G
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---T 257
              DA  Y V++ GL KN +++ A +++ EM+G GI PD      LI   S  G +   +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIF 316
            +  E+ E+  +    ++ N ++     +G I++A  LL  M +KG              
Sbjct: 648 SIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-------------- 692

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  ++  II+   K G L  A  LF EM   G + + F+Y  L+DG C  N +E
Sbjct: 693 ---LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 377 ESY----------------------------------ELLREMEESGF----KPTHFTLN 398
            +                                   E+L  + +  F    KP   T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M   LC+  ++  A  L  +M+     P V   T L+    K G+  E F    + +  
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-----GCCPDVVAYNIIISGLCKAQ 513
           G  PD + YS  I   +       AL L   + A      GC   +     ++SG  K  
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +  AE +   M+    IP  AT   LIN  C S N
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 24/202 (11%)

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V +     G I    ++ A+ +F         P +    +++  L +  R+    D++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--------------- 567
             M+ + ++  V TY++LI   C++GN+      L +  EKE  +               
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EKEFRTATLNVDGALKLKESM 268

Query: 568 ------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P   TY  LIDGLC   R +DA  L  EM+  G + +  T+  LI GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 622 RAA--LVHFRMMKEKGMKPDMF 641
            AA  LVH  +     +KP M+
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMY 350


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 176/661 (26%), Positives = 305/661 (46%), Gaps = 61/661 (9%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C+P+  +Y  L++ LCK   VD      + M+  G   D  T   L++   N G+ D+A 
Sbjct: 155 CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEAC 214

Query: 122 SVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            ++ E+I+ G+     V   L+ A  K G+VD+A E+ + +    +  +   +  L+ G+
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  RVD  L+L  +M +     D   Y++++ G  +  +L+ AL+L+  +   G  P+ 
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ--- 297
              + +I    D   +        E  DV + T    ++++ L  +  ID+A  L +   
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEALDVISYT----TVIKGLADSKRIDEACELFEKLK 390

Query: 298 ----------------AMIKGEPIADVGVEMLMIFKGTVS-PNTSSFDIIINTLLKDGKL 340
                            ++K   I D G++      G+   P  +++ ++I+ L K   L
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIED-GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQML 449

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  +F +M Q GC+ +   Y  LIDG   +++++E+ +LL  M   G +PT  T  S+
Sbjct: 450 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 509

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +  A  ++ +MR +G EP +   T L+      G+A EA++ LT+M   G 
Sbjct: 510 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 569

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV-------------------- 500
            PD++ Y++ I  L    RV  A  +F  +   GC PD +                    
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629

Query: 501 ---------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
                          AYN ++ G  K +RV +A  +++ M+  G+ P+  T+N+L++G  
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G  D+A      MLEK+   P +++YT LIDGL  AGR  +A   + EM ++G  P  
Sbjct: 690 KDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPEC 749

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            T+ +LI  L K  R   A      M + G+ PD+  + ALI+  +       A++V +E
Sbjct: 750 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQE 809

Query: 666 M 666
           M
Sbjct: 810 M 810



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 171/658 (25%), Positives = 292/658 (44%), Gaps = 61/658 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  LF ++   G C P   SYN ++  L     +D        M D G   D    T
Sbjct: 36  IDKAIELFLEMPSMG-CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFT 94

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            L+  +C +GQ      + N+ +     D  +++ ++  + K G++D   +++E M    
Sbjct: 95  TLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAG 154

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              +   + VLI    K  RVD+A +LF++M KSG   D   +  +I  L  + +L+ A 
Sbjct: 155 CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEAC 214

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRI 282
           +LY EM   G  P  E+   LI +    G++     EI++    + V T  +  NS+M  
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVD-EANEIYQTVVAKKVATSRVAYNSLMDG 273

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D    LL  M++ +                  P+  +++I++    +  +LD 
Sbjct: 274 YCKLGRVDDGLKLLLQMVECDNF----------------PDIQTYNILVAGFSRANRLDD 317

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL LF+ ++  GC  N   Y  +I GL ++ R+EE+     E  +        +  ++ +
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV------ISYTTVIK 371

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L   + +  A  L  K++  G  P V   T +I  L K G+  +  +   DM     +P
Sbjct: 372 GLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVP 431

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
               Y+  I GL   + +  A ++F  +   GC PD + Y  +I G  KA ++ EA  L 
Sbjct: 432 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK--ESG-------------- 566
           + M+TKG  P+  TY  +++G+CK   I++A   +++M E+  E G              
Sbjct: 492 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 551

Query: 567 ------------------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                             +PDVI YT+LID L   GR  +A  +++ M EKGCAP+ +T+
Sbjct: 552 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 611

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +I    K     AA     +M + G+ PD F + +L+  ++       AF V   M
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 669



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 173/590 (29%), Positives = 270/590 (45%), Gaps = 45/590 (7%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
           LKEM   G   D      +L   C + + DKA+ +F E+   G     V ++ ++   + 
Sbjct: 8   LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             ++D+A +    M D     +   F  LIHGF K  +      L ++  K  F  D  +
Sbjct: 68  IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFL 126

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I G CK   L+   ++  EM  +G  PD      LI      G     V E +E  
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR----VDEAYELF 182

Query: 268 D-----------VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           +           V  MTL+       L ++G +D+A  L + MI      + G E     
Sbjct: 183 ERMRKSGCLGDYVTFMTLI-----EALSNHGKLDEACELYREMI------ERGYE----- 226

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P     D +I  L K GK+D A  +++ +       +   YN+L+DG C   R++
Sbjct: 227 -----PYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           +  +LL +M E    P   T N +     R   +  AL L + +   G +P     T +I
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + L    +  EA  F  + +      D++ Y+  I GL D KR+D A ELF  +   GC 
Sbjct: 342 QGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VVAY  +I GL KA R+ +    F +M     +P+  TY ++I+G CK+  +  A   
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             +M++K    PD ITYTTLIDG   A + D+A  L + M  KG  P  +T+ +++ G C
Sbjct: 456 FEQMVQK-GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K D    A      M+E+G +P +F+F +L+S +LS+     A++VL EM
Sbjct: 515 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 170/629 (27%), Positives = 284/629 (45%), Gaps = 27/629 (4%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEA-NMLFDQVKREGLCV 63
           L +A ++     + Q VV  +   S  A   L+     +G V++   +L   V+ +    
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF-- 296

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L+    ++  +D      K +  YG   +  T T ++Q   ++ + ++A + 
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           F+E +D   V  +   I  +A SK   +D+ACEL E++       N   +  +I G +K 
Sbjct: 357 FDEALD---VISYTTVIKGLADSK--RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R++  L+ F+ M+ S        Y V+I GLCK + L  A +++ +M   G  PD    
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           + LI   S   ++     E  +  DV    +L        V+ GSI   +  L  + + +
Sbjct: 472 TTLIDGFSKASKM----DEARKLLDV----MLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            +      +  + +    P    F  +++  L  G+ + A  +  EMT  GC  +V LY 
Sbjct: 524 EV------IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 577

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LID L ++ R+ E+  +   M E G  P   T  ++ +   +  +V  A  ++  M   
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKS 637

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       L+    K  +  +AF     MV  G  P+ V ++  + GL    + D A
Sbjct: 638 GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRA 697

Query: 484 LELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             LF+++       P +V+Y I+I GL KA RV+EA   F EMI +G+IP   TY  LI 
Sbjct: 698 FSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIY 757

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              K+G I +A   +  M+ K   +PDV  Y+ LI GL  +   D A  ++ EM ++GCA
Sbjct: 758 SLAKAGRIPEAKKLVEDMV-KLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816

Query: 603 PNRITFMALITGLCKCDRP---RAALVHF 628
           PN +T+  L  G     R     A   HF
Sbjct: 817 PNEVTYKVLRRGFRAAGRALDLEAVKQHF 845



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 219/513 (42%), Gaps = 83/513 (16%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +++AL    +M  +G   D    ++++ GLCK ++++ A++L+ EM   G  P   I+S 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEP--TIVSY 58

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI----- 300
                                          N+++  L S   +D+AY    +MI     
Sbjct: 59  -------------------------------NTVISGLASIDKMDEAYKFFNSMIDNGCE 87

Query: 301 ---------------KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                           G+P   VG  +L        P+   +  +I+   K G LD    
Sbjct: 88  PDVIAFTTLIHGFCKAGQP--QVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFK 145

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  EM   GC+ +   Y  LID LC   R++E+YEL   M +SG    + T  ++   L 
Sbjct: 146 ILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALS 205

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               +  A  L R+M  +G+EP+++    LI  LCK GK  EA      +V +      V
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y++ + G   + RVD  L+L   +      PD+  YNI+++G  +A R+ +A +LF  +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE----------------------- 562
            + G  P+ ATY  +I G   +  +++A       L+                       
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACEL 385

Query: 563 ----KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
               K +G SP+V+ YT +IDGL  AGR +D +  + +M    C P R T+  +I GLCK
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK 445

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                 A   F  M +KG  PD   +  LI  F
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 255/570 (44%), Gaps = 30/570 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            SRA R+     L + +    C  +      +I+ L     +EEA   FD    E L V 
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD----EALDV- 363

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              SY  +++ L  S  +D      ++++  G   +    T ++     +G+ +  L  F
Sbjct: 364 --ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++     V     +++++    K   +  AC++ E+M       +  T+  LI GF K 
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           S++D+A +L D M   G    A  Y  I+ G CK   +  A ++ ++M+  G  P   I 
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + L++    +G      + + E   R      +L  S++ +L S G + +A ++  +MI+
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG  +P+  ++  II    K G ++ A  +   M + G   + F 
Sbjct: 602 ---------------KG-CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+L+DG     R+++++ +   M  SG KP   T N +   L +      A +L ++M 
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705

Query: 422 VQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            +    P +   T+LI  L K G+  EAF    +M+  G +P+   Y++ I  L    R+
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 765

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A +L  D+   G  PDV AY+ +I+GL  +  V  A D+F EM+ +G  P+  TY +L
Sbjct: 766 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825

Query: 541 INGWCKSG---NIDQAMLCLSRMLEKESGS 567
             G+  +G   +++      S+ +  E+GS
Sbjct: 826 RRGFRAAGRALDLEAVKQHFSQGVAMEAGS 855


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 175/609 (28%), Positives = 292/609 (47%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  VDL     KEM + G+  D++T+       C  G++  AL +
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                +   +D  + + ++    +    D+A   + RM   +   N  T+  L+ GF+KK
Sbjct: 98  IER--EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++    ++ + M   G   + ++++ ++   C  K    A +L + M   G  P + + 
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215

Query: 244 SKLITS-CSDEG----ELTLLVKEIW-EDRDVNTMTLLCN--SIMRILVSNGSIDQAYNL 295
           +  I S C  E     +L  L ++I+ E    N +    N  +  R L   G  D+A+ L
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M++               KG V P+TS++  +I  L    K++ A  LF+EM  +G 
Sbjct: 276 IKEMMR---------------KGFV-PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V+ Y  LID  C +  +E++  L  EM   G  PT  T  ++     + + V  A +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV----------------QEG 459
           +  +M   G  P       L+  LCK G   +AF     ++                +  
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y A + GL    +VD A EL   + + GC P+ + Y+ +I G CKA ++  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F +M   G +PSV TY  LI+   K G +D AM  LS+ML K+S +P+V+TYT +IDG
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDG 558

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G  + A+ L + MEEKGC+PN +T+ ALI GL K  +   +L  F  M  KG  P+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 619 YVTYRVLIN 627



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 171/676 (25%), Positives = 277/676 (40%), Gaps = 78/676 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L      +EA M F    R   C+PN  +Y  LL    K   +   +  +  M   
Sbjct: 113 MISGLMEASYFDEA-MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 171

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID----HGWVDEHVFSILLVAFSKWGE- 150
           G   +      L+  YCN   +  A  + N +       G+V  ++F   +    K    
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 231

Query: 151 --VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             +D A ++   M   N  LN+              + DKA QL  +M + GF  D + Y
Sbjct: 232 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 291

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             +I  LC   ++E A  L+ EMK  G+TPD    + LI S    G   L+ +  W   +
Sbjct: 292 SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG---LIEQAQWLFEE 348

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                      MR +  + ++     L+ A +K + +         +      PN  ++ 
Sbjct: 349 -----------MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397

Query: 329 IIINTLLKDGKLDLALSLFREMTQIG----------------CMQNVFLYNNLIDGLCNS 372
            +++ L K G +  A  ++ ++                       NV  Y  L+DGLC +
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           ++++ ++ELL  M  SG +P H   +++    C+   +  A  +  +M   G+ P V   
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 517

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI  + K G+   A + L+ M+++   P++V Y+A I GL  I   + AL+L   +  
Sbjct: 518 TSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEE 577

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            GC P+VV Y  +I GL KA ++  + DLF +M  KG  P+  TY +LIN  C +G +D+
Sbjct: 578 KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDK 637

Query: 553 AMLCLSRM--------------------------------LEKESGSPDVITYTTLIDGL 580
           A L L  M                                +E     P    Y  LID  
Sbjct: 638 ARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCF 697

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRIT-----FMALITGLCKCDRPRAALVHFRMMKEKG 635
             AGR + A+ L  EM E    P+ +      + +LI  LC   +   A   +  M  +G
Sbjct: 698 SKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754

Query: 636 MKPDMFVFVALISAFL 651
             P++ VFV LI   +
Sbjct: 755 FVPELSVFVCLIKGLV 770



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 159/661 (24%), Positives = 279/661 (42%), Gaps = 110/661 (16%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           +++ + C ++   +    RCL  VG  ++A  L  ++ R+G  VP+  +Y+ ++  LC +
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHA 301

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
             V+   +  +EM+  G   D YT T L+  +C +G  ++A  +F E+   G     V +
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+ A+ K  +V +A ++  RM D   R N+ T+  L+ G  K   + KA +++ K+  
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421

Query: 199 SGFASDA----------------AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  ++D+                  Y  ++ GLCK  +++ A +L   M  SG  P+  +
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
              LI                            C +        G ID A  +   M K 
Sbjct: 482 YDALIDG-------------------------FCKA--------GKIDSAQEVFLQMTKC 508

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             +  V                 ++  +I+ + KDG+LDLA+ +  +M +  C  NV  Y
Sbjct: 509 GYLPSV----------------HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +IDGLC     E++ +LL  MEE G  P   T  ++   L +   +  +L+L  +M  
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P      +LI  LC  G   +A   L +M Q  +   +  Y  AI G    K    
Sbjct: 613 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIA 670

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +L +  ++ ++G  P    Y ++I    KA R+  A +L  EM+    +PS         
Sbjct: 671 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPS--------- 718

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
               S   D  M                  Y +LI  LC+A + ++A  L++EM  +G  
Sbjct: 719 ----SVKTDNDM------------------YASLIQALCLASQVEEAFRLYSEMTRRGFV 756

Query: 603 PNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGM------KPDMFVFVALISAFLSELN 655
           P    F+ LI GL +  +   AL + + +  E G+      +  +F FV ++  +   + 
Sbjct: 757 PELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQIFLFTFVVIVVGYGKNIE 816

Query: 656 P 656
           P
Sbjct: 817 P 817



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 45/307 (14%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +++ G++P+  T N++ + L     V     + ++M   G              LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 445 AMEAFRFLTDMVQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
             +A     DM++ E F  D V  +  I GL++    D A+     +  + C P+VV Y 
Sbjct: 91  WADAL----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYR 146

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-- 561
            ++SG  K +++   + + N M+T+G  P+ + +N L++ +C   +   A   L+RM   
Sbjct: 147 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 206

Query: 562 ------------------EKESGSPDVITYTTLIDG--------------------LCIA 583
                             +++  SPD++     I G                    LC  
Sbjct: 207 GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 266

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+ D A  L  EM  KG  P+  T+  +IT LC   +   A + F+ MK  G+ PD++ +
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 644 VALISAF 650
             LI +F
Sbjct: 327 TILIDSF 333


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 171/626 (27%), Positives = 302/626 (48%), Gaps = 25/626 (3%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  +F ++  +G+  P+N +YN +++ LCK+ +VD  E   ++M D G   D  T  
Sbjct: 276 VDMAEGVFQKMVDKGV-KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYN 334

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            ++   C +   DKA  VF ++ID G   D   ++I++    K   VD+A  + ++M D 
Sbjct: 335 TIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK 394

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            ++ N  T+  LIHG++   + ++ +Q   +M+      D   Y +++  LCKN +   A
Sbjct: 395 GVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEA 454

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             L+  M   GI P   I   ++     +G L+ +                 + ++ ++V
Sbjct: 455 RSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM-----------------HDLLNLMV 497

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDIIINTLLKDGKL 340
           +NG I   + +   +I       +  E++ IF    +  +SPN  ++  +I+ L K G++
Sbjct: 498 ANG-ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A+  F +M   G   N  ++N+L+ GLC  ++ E+  EL  EM   G +P     N++
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTV 616

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC+   V+ A  L+  M   G +P V     LI   C   +  EA + L  MV  G 
Sbjct: 617 LCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGL 676

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P+IV Y+  + G     R+D A  LFR++   G  P V  YN I++GL ++ R +EA +
Sbjct: 677 KPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE 736

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L+  MI    + S+ TY+++++G+CK+   D+A      +   +    D+IT+  +IDGL
Sbjct: 737 LYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL-QLDIITFNIMIDGL 795

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              GR +DA+ L+  +   G  P+ +T+  +   L +          F +M++ G  P+ 
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNS 855

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
            +  ALI   L     P A   L ++
Sbjct: 856 HMLNALIRKLLDRGEIPRAGAYLSKL 881



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/631 (26%), Positives = 293/631 (46%), Gaps = 59/631 (9%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           AR +  + V  QD   S C     +   +I    + G V++A  LF ++       P+  
Sbjct: 174 ARELLHMMVDGQD---SSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG----VSPDVV 226

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN +++ LCK+  VD  E   ++M + G   +  T   ++   C + + D A  VF ++
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +D G    +V ++ ++    K   VD+A  + ++M D  ++ +  T+  +I G  K   +
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAI 346

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           DKA  +F +M   G   D   Y +II GLCK + ++ A  ++ +M   G+ P+    + L
Sbjct: 347 DKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCL 406

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I      G+   +V+ I E                          A++L           
Sbjct: 407 IHGYLSTGQWEEVVQRIKEM------------------------SAHDL----------- 431

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                          P+  ++ ++++ L K+GK + A SLF  M + G   +V +Y  ++
Sbjct: 432 --------------EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      L E ++LL  M  +G  P H   N++     +R  +   +++  KM+ QG  
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V     LI  LCK G+  +A      M+ EG  P+ V +++ + GL  + + +   EL
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F ++   G  PD+V +N ++  LCK  RV EA  L + M+  GL P V +YN LI+G C 
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +  +D+A+  L  M+      P++++Y TL+ G C AGR D+A  L+ EM  KG  P   
Sbjct: 658 ASRMDEAVKLLDGMVSA-GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716

Query: 607 TFMALITGLCKCDR-PRAALVHFRMMKEKGM 636
           T+  ++ GL +  R   A  ++  M+K + +
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKL 747



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 265/581 (45%), Gaps = 93/581 (16%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACE-LIER 160
           T + ++  +C  G+ +   + F  I+  GW VD+ V + LL        V +A   L+ +
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT---KSGFASDAAMYDVIIGGLCK 217
           M +   RL   ++  L+ G   + R ++A +L   M     S  + D   Y+++I G   
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             Q++ A  L+ EM   G++PD                                  +  N
Sbjct: 206 EGQVDKAYSLFLEM---GVSPD---------------------------------VVTYN 229

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +I+  L     +D+A ++ Q M++               KG V PN  +++ II+ L K 
Sbjct: 230 TIIDGLCKAQEVDRAEDVFQQMVE---------------KG-VKPNNVTYNTIIDGLCKA 273

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++D+A  +F++M   G   +   YN +IDGLC +  ++ +  + ++M + G KP H T 
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++   LC+ Q +  A  + ++M  +G +P     T++I  LCK      A      M+ 
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  P+   Y+  I G +   + +  ++  +++ AH   PDV  Y +++  LCK  +  E
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGN---------------------------- 549
           A  LF+ MI KG+ PSV  Y ++++G+ K G                             
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 550 -------IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                  ID+ M    +M +++  SP+V+TY TLID LC  GR DDA++ +N+M  +G  
Sbjct: 514 AYAKRAMIDEVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           PN + F +L+ GLC  D+       F  M  +G++PD+  F
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 232/469 (49%), Gaps = 25/469 (5%)

Query: 189 ALQLFDKMTK---SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           A+  F++M +   +  A D   Y ++IG  C+  +LE+    +  +  +G   D  ++++
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 246 LITSCSDE---GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L+    D    GE   ++     +       +  N++++ L      ++A  LL  M+ G
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           +               + SP+  S++I+IN    +G++D A SLF EM   G   +V  Y
Sbjct: 185 Q-------------DSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTY 228

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDGLC +  ++ + ++ ++M E G KP + T N++   LC+ Q+V  A  + +KM  
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288

Query: 423 QGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           +G +P  V +NT +I  LCK      A      M+  G  PD V Y+  I GL   + +D
Sbjct: 289 KGVKPSNVTYNT-IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F+ +   G  PD + Y III GLCKAQ V  AE +F +MI KG+ P+  TYN LI
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G+  +G  ++ +  +  M   +   PDV TY  L+D LC  G+ ++A  L++ M  KG 
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDL-EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            P+   +  ++ G  K            +M   G+ P+  +F  +I A+
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 193/360 (53%), Gaps = 10/360 (2%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ML      V+P+  ++ I+I    + G+L+L  + F  + + G   +  + N L+ GLC+
Sbjct: 72  MLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCD 131

Query: 372 SNRLEES-YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE---- 426
           + R+ E+ + LLR+M E G +    + N++ + LC R+    A  L+  M V G +    
Sbjct: 132 TKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMM-VDGQDSSCS 190

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V    ++I      G+  +A+    +M   G  PD+V Y+  I GL   + VD A ++
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F+ +   G  P+ V YN II GLCKAQ V  AE +F +M+ KG+ PS  TYN +I+G CK
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +  +D+A     +M+++    PD +TY T+IDGLC A   D A  ++ +M +KG  P+ +
Sbjct: 308 AQAVDRAEGVFQQMIDR-GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  +I GLCK      A   F+ M +KG+KP+   +  LI  +LS        + +KEM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 247/528 (46%), Gaps = 34/528 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  +F Q+  +G+  PNN +YNCL+     +   + V  R+KEM  +    D +T  
Sbjct: 381 VDRAEGVFQQMIDKGV-KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDC 164
            LL   C +G+ ++A S+F+ +I  G      ++ I+L  + K G + +  +L+  M   
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  N + F  +I  + K++ +D+ + +F KM + G + +   Y  +I  LCK  +++ A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559

Query: 225 LQLYSEMKGSGITPDFEILSKLITS-CS-------DEGELTLLVKEIWEDRDVNTMTLLC 276
           +  +++M   G+TP+  + + L+   C+       +E  L +L + I  D  V   T+LC
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI-VFFNTVLC 618

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N     L   G + +A  L+ +M+             M  K    P+  S++ +I+    
Sbjct: 619 N-----LCKEGRVMEARRLIDSMV------------CMGLK----PDVISYNTLIDGHCF 657

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             ++D A+ L   M   G   N+  YN L+ G C + R++ +Y L REM   G  P   T
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDM 455
            N++   L R      A  L   M ++  + W +   ++++   CK+    EAF+    +
Sbjct: 718 YNTILNGLFRSGRFSEARELYVNM-IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
                  DI+ ++  I GL    R + A++LF  I A+G  P VV Y +I   L +   +
Sbjct: 777 CSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSL 836

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            E + LF+ M   G  P+    N LI      G I +A   LS++ EK
Sbjct: 837 EELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 175/609 (28%), Positives = 292/609 (47%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  VDL     KEM + G+  D++T+       C  G++  AL +
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                +   +D  + + ++    +    D+A   + RM   +   N  T+  L+ GF+KK
Sbjct: 98  IER--EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++    ++ + M   G   + ++++ ++   C  K    A +L + M   G  P + + 
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215

Query: 244 SKLITS-CSDEG----ELTLLVKEIW-EDRDVNTMTLLCN--SIMRILVSNGSIDQAYNL 295
           +  I S C  E     +L  L ++I+ E    N +    N  +  R L   G  D+A+ L
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M++               KG V P+TS++  +I  L    K++ A  LF+EM  +G 
Sbjct: 276 IKEMMR---------------KGFV-PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V+ Y  LID  C +  +E++  L  EM   G  PT  T  ++     + + V  A +
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV----------------QEG 459
           +  +M   G  P       L+  LCK G   +AF     ++                +  
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y A + GL    +VD A EL   + + GC P+ + Y+ +I G CKA ++  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F +M   G +PSV TY  LI+   K G +D AM  LS+ML K+S +P+V+TYT +IDG
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDG 558

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G  + A+ L + MEEKGC+PN +T+ ALI GL K  +   +L  F  M  KG  P+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 619 YVTYRVLIN 627



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 277/677 (40%), Gaps = 80/677 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L      +EA M F    R   C+PN  +Y  LL    K   +   +  +  M   
Sbjct: 113 MISGLMEASYFDEA-MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 171

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGE----- 150
           G   +      L+  YCN   +  A  + N +   G    +V   + +  S  G+     
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG-SICGQEKLPS 230

Query: 151 ---VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
              +D A ++   M   N  LN+              + DKA QL  +M + GF  D + 
Sbjct: 231 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I  LC   ++E A  L+ EMK  G+TPD    + LI S    G   L+ +  W   
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG---LIEQAQWLFE 347

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +           MR +  + ++     L+ A +K + +         +      PN  ++
Sbjct: 348 E-----------MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIG----------------CMQNVFLYNNLIDGLCN 371
             +++ L K G +  A  ++ ++                       NV  Y  L+DGLC 
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +++++ ++ELL  M  SG +P H   +++    C+   +  A  +  +M   G+ P V  
Sbjct: 457 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T LI  + K G+   A + L+ M+++   P++V Y+A I GL  I   + AL+L   + 
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             GC P+VV Y  +I GL KA ++  + DLF +M  KG  P+  TY +LIN  C +G +D
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 552 QAMLCLSRM--------------------------------LEKESGSPDVITYTTLIDG 579
           +A L L  M                                +E     P    Y  LID 
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDC 696

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRIT-----FMALITGLCKCDRPRAALVHFRMMKEK 634
              AGR + A+ L  EM E    P+ +      + +LI  LC   +   A   +  M  +
Sbjct: 697 FSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 635 GMKPDMFVFVALISAFL 651
           G  P++ VFV LI   +
Sbjct: 754 GFVPELSVFVCLIKGLV 770



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 256/595 (43%), Gaps = 78/595 (13%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           +++ + C ++   +    RCL  VG  ++A  L  ++ R+G  VP+  +Y+ ++  LC +
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHA 301

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
             V+   +  +EM+  G   D YT T L+  +C +G  ++A  +F E+   G     V +
Sbjct: 302 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 361

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+ A+ K  +V +A ++  RM D   R N+ T+  L+ G  K   + KA +++ K+  
Sbjct: 362 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421

Query: 199 SGFASDA----------------AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  ++D+                  Y  ++ GLCK  +++ A +L   M  SG  P+  +
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
              LI                            C +        G ID A  +   M K 
Sbjct: 482 YDALIDG-------------------------FCKA--------GKIDSAQEVFLQMTKC 508

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             +  V                 ++  +I+ + KDG+LDLA+ +  +M +  C  NV  Y
Sbjct: 509 GYLPSV----------------HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +IDGLC     E++ +LL  MEE G  P   T  ++   L +   +  +L+L  +M  
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P      +LI  LC  G   +A   L +M Q  +   +  Y  AI G    K    
Sbjct: 613 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIA 670

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT-----Y 537
           +L +  ++ ++G  P    Y ++I    KA R+  A +L  EM+    +PS        Y
Sbjct: 671 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMY 727

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
             LI   C +  +++A    S M  +    P++  +  LI GL    + D+A+ L
Sbjct: 728 ASLIQALCLASQVEEAFRLYSEM-TRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 232/511 (45%), Gaps = 87/511 (17%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A +LF ++K  G+  P+ Y+Y  L+++ CK+  ++  +   +EM+  G      T T
Sbjct: 304 VEKAFLLFQEMKMVGV-TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + Q  +A  +F+ ++D G     V +  L+    K G + KA E+  ++   
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        D   +  N  T+  L+ G  K  +VD A +L D M  SG   +  +Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWE 265
           D +I G CK  +++ A +++ +M   G  P     + LI     +G L L +K   ++ +
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 266 DR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           D    +V T T + + + RI    G  ++A  LL                LM  KG  SP
Sbjct: 543 DSCTPNVVTYTAMIDGLCRI----GESEKALKLLS---------------LMEEKG-CSP 582

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+ L K GK+DL+L LF +M++ GC  N   Y  LI+ LC +  L+++  LL
Sbjct: 583 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642

Query: 383 REMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVK---------- 430
            EM+++ + P +      +RC  +   +  + +L ++ +M   G  P             
Sbjct: 643 GEMKQT-YWPKYL---QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFS 698

Query: 431 -----------HNTL----------------LIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                      H  +                LI+ LC   +  EAFR  ++M + GF+P+
Sbjct: 699 KAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPE 758

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +  +   I GL+++K+ D AL+L   IC  G
Sbjct: 759 LSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 78/329 (23%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN L+  L ++ +++  + + +EM ESGF    FT+      LC+      AL+++ +  
Sbjct: 43  YNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER-- 100

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                                               E F  D V  +  I GL++    D
Sbjct: 101 ------------------------------------EDFKLDTVLCTHMISGLMEASYFD 124

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+     +  + C P+VV Y  ++SG  K +++   + + N M+T+G  P+ + +N L+
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184

Query: 542 NGWCKSGNIDQAMLCLSRML--------------------EKESGSPDVITYTTLIDG-- 579
           + +C   +   A   L+RM                     +++  SPD++     I G  
Sbjct: 185 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 244

Query: 580 ------------------LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                             LC  G+ D A  L  EM  KG  P+  T+  +IT LC   + 
Sbjct: 245 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 304

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A + F+ MK  G+ PD++ +  LI +F
Sbjct: 305 EKAFLLFQEMKMVGVTPDVYTYTILIDSF 333


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 181/611 (29%), Positives = 296/611 (48%), Gaps = 28/611 (4%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L  PN   YN +++ALCK   V        EM   G   +  T + L+  +C  G+  +A
Sbjct: 128 LAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEA 187

Query: 121 LSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L + N ++    ++ +V  ++IL+ A  K G+V +A  ++  M    ++ N  T+  L+ 
Sbjct: 188 LGLLNVMVLK-TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMD 246

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+     V KA  +F+ M+  G   D   Y+++I G CK K+++ AL L+ EM  S   P
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306

Query: 239 DFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
             +  +K++ S +     +  V      E + +       N ++      G I   +++L
Sbjct: 307 IIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL 365

Query: 297 QAMIK-GEPIADVGVEML---MIFKGTVSP---------------NTSSFDIIINTLLKD 337
             ++K G P + V +  L   +  KG V                 N  S+  +IN + K 
Sbjct: 366 AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKI 425

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G    A+ L R++       NV +Y+ +ID LC    + E+Y L  EM   G      T 
Sbjct: 426 GDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +++    C    +  A+ L+ +M ++   P V+  T+L+  L K GK  EA   L  M++
Sbjct: 486 STLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
               PD+  Y+  + G + +  V  A  +F  +   G  PDV  Y I+I+G CK++ V E
Sbjct: 546 ACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDE 605

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTL 576
           A +LF EM  K ++P   TY+ L++G CKSG I      +  M  ++ G P DVITY +L
Sbjct: 606 ALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM--RDRGQPADVITYNSL 663

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC  G  D AI L+N+M+++G  PN  TF  L+ GLCK  R + A   F+ +  KG 
Sbjct: 664 IDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723

Query: 637 KPDMFVFVALI 647
             D++++  +I
Sbjct: 724 HLDVYIYNVMI 734



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 277/613 (45%), Gaps = 50/613 (8%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
           L ++   G+  D  TL  L++  C  GQ  +AL   ++++  G+ +++  ++ L+    +
Sbjct: 51  LTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCR 110

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G+   A + + ++D    + N + +  +I    K   V +A  LF +MT  G +++   
Sbjct: 111 IGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I G C   +L+ AL L + M    I P+    + L+ +   EG+       + E +
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK-------VKEAK 223

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            V    +L   +   +++  ++   Y L+  + K + + +      M   G V+P+  S+
Sbjct: 224 SV-LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNA-----MSLMG-VTPDVHSY 276

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+IN   K  ++D AL+LF+EM  +     +  +N ++D          +  L   +E 
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G +P  FTLN +  C C    +    +++ K+  +G+ P       LIK LC  G+  +
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A  F   ++ +GF  + V Y+  I G+  I     A++L R I      P+V  Y+ II 
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML------ 561
            LCK Q V+EA  LF+EM  KG+   V TY+ LI G+C  G + +A+  L+ M+      
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 562 -----------------EKESGS-----------PDVITYTTLIDGLCIAGRPDDAIMLW 593
                             KE+ S           PDV TY TL++G  +      A  ++
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           N M   G  P+  T+  LI G CK      AL  F+ M +K M PD   + +L+      
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 654 LNPPLAFEVLKEM 666
                 ++++ EM
Sbjct: 636 GRISYVWDLIDEM 648



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 246/546 (45%), Gaps = 65/546 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM------------- 92
           V++A  +F+ +   G+  P+ +SYN ++   CK   VD      KEM             
Sbjct: 254 VKKAQHVFNAMSLMGV-TPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNK 312

Query: 93  --------QDY-------------GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
                   + Y             G   D +TL  L+  +C+ GQ     SV  +I+  G
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
           +    V  + L+      G+V KA    +++     +LN+ ++  LI+G  K      A+
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           +L  K+       +  MY  II  LCK + +  A  L+SEM   GI+ D    S LI   
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492

Query: 251 SDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
              G+L   +  + E      + DV T T+L +++ +     G + +A ++L  M+K   
Sbjct: 493 CIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGK----EGKVKEAKSVLAVMLKACV 548

Query: 305 IADV-GVEMLM--------------IFKGT----VSPNTSSFDIIINTLLKDGKLDLALS 345
             DV     LM              +F       V+P+  ++ I+IN   K   +D AL+
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALN 608

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF+EM Q   + +   Y++L+DGLC S R+   ++L+ EM + G      T NS+   LC
Sbjct: 609 LFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLC 668

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   +  A+ L  KM+ QG  P     T+L+  LCK G+  +A     D++ +G+  D+ 
Sbjct: 669 KNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVY 728

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I G      ++ AL +   +  +GC P+ V ++III+ L K     +AE L  +M
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788

Query: 526 ITKGLI 531
           I +GL+
Sbjct: 789 IARGLL 794



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 250/548 (45%), Gaps = 27/548 (4%)

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +LSV  +I+  G+  + V  + L+      G+V +A    +++     +LN+ ++  LI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  +      A++   K+       +  MY+ II  LCK + +  A  L+SEM   GI+ 
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 239 DFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +    S LI      G+L   L +  +   + +N      N ++  L   G + +A ++L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M+K                  V  N  ++  +++      ++  A  +F  M+ +G  
Sbjct: 227 AVMLKA----------------CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 270

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN +I+G C   R++++  L +EM  S F P     N +     + +    A++L
Sbjct: 271 PDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPI-IQFNKILDSFAKMKHYSTAVSL 329

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             ++ ++G +P +    +LI   C  G+    F  L  +++ G+ P  V  +  I GL  
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             +V  AL     + A G   + V+Y  +I+G+CK      A  L  ++  +   P+V  
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y+ +I+  CK   + +A    S M  K   S DV+TY+TLI G CI G+  +AI L NEM
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIVGKLKEAIGLLNEM 508

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             K   P+  T+  L+  L K  + + A     +M +  +KPD+F +  L++ +L     
Sbjct: 509 VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL----- 563

Query: 657 PLAFEVLK 664
            L +EV K
Sbjct: 564 -LVYEVKK 570



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 54/448 (12%)

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +P F  L   I +  D   L++L K +      +T+TL  N++++ L   G + +A +  
Sbjct: 30  SPPF-FLPPSIQNVDDAVSLSVLTKILKRGYPPDTVTL--NTLIKGLCLKGQVKEALHFH 86

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             ++        G ++          N  S+  +IN + + G    A+   R++      
Sbjct: 87  DKLLAQ------GFQL----------NQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAK 130

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV +YN +ID LC    + E+Y L  EM   G      T +++    C    +  AL L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M ++   P V    +L+  LCK GK  EA   L  M++     +++ YS  + G   
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI---------- 526
           +  V  A  +F  +   G  PDV +YNI+I+G CK +RV +A +LF EMI          
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310

Query: 527 ------------------------TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                                    KG+ P + T N+LIN +C  G I      L+++L 
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL- 369

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           K    P  +T  TLI GLC+ G+   A+   +++  +G   N++++  LI G+CK    R
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAF 650
            A+   R +  +  KP++ ++  +I A 
Sbjct: 430 GAIKLLRKIDGRLTKPNVEMYSTIIDAL 457


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 180/647 (27%), Positives = 298/647 (46%), Gaps = 66/647 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+N +Y  L+    ++ +  +V     EM    +  D  T   +L+ YC  G  D+ALS 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 124 FNE------------IIDHGWV----------------------DEHVFSILLVAFSKWG 149
           F              I+ HG                        D  V++ L+    K G
Sbjct: 82  FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++D A  +++ M + +   +  T+  LI G  + + +D+A +L +KM +SG   D   Y+
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWE 265
            ++ GLCK  QLE   +L  EM  +G  PD    + ++    + G+      +L K I +
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-------------------KGEPIA 306
               + +T   NS+M        +D+A  LL+ M+                   + + +A
Sbjct: 262 KCGPDVVTY--NSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D    M  +FK  +SP+  +++ +++ L K GKL+ A  L   M +  C  +V  Y+ L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +GLC   +++++  LL  M E G +P   T N+M    C+   V     ++  M+     
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V   + LI   CK  +  +AF  L      G  PD   YS+ + GL    +V+ A E+
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEV 493

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              +   GC P    Y +II GLC  +R  EA  +   M  +G  P++ TY++LING CK
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCK 553

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +  ++ A+  L  MLEK    PDV TYT+LIDG C   + D A   +  M + GC P+++
Sbjct: 554 TKRVEDAINVLDVMLEK-GCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            +  LI+G C+      A+   ++M EKG  PD   + +L+ +  +E
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 252/536 (47%), Gaps = 58/536 (10%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  L +++K  GL  P+  +YN LL  LCK   ++ V   L+EM + G   D ++  
Sbjct: 178 LDEARKLMEKMKESGL-TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYN 236

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            ++   C SG++++A  +  ++I+     D   ++ L+  F K  ++D+A  L+E M   
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
                  T+  LI GF +  R+  A ++ + M K+G + D   Y+ ++ GLCK  +LE A
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            +L   M      PD                             V T ++L N + ++  
Sbjct: 357 HELLEVMVEKDCAPD-----------------------------VVTYSILVNGLCKL-- 385

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +D A  LL+                M+ +    PN  +F+ +I+   K GK+D   
Sbjct: 386 --GKVDDARLLLE----------------MMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +   M ++ C  +V  Y+ LIDG C +NR+++++ +L      G  P   + +SM   L
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGL 481

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C    V  A  ++  M  QG  P   H  L+I  LC   +  EA + L  M + G  P++
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL 541

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             YS  I GL   KRV+ A+ +   +   GC PDV  Y  +I G CK  ++  A   F  
Sbjct: 542 YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKT 601

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           M   G  P    YN+LI+G+C+SGN+++A+  +  MLEK   +PD  TY +L+  L
Sbjct: 602 MRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK-GCNPDAATYFSLMRSL 656



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 243/509 (47%), Gaps = 26/509 (5%)

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           ER  D + + +  T+  LI GF +       L++ ++M    F+ D   ++ I+   C+ 
Sbjct: 14  ERFSDPS-KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72

Query: 219 KQLEMALQLY-SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             L+ AL  +  +M  S     + IL   +  C    E   L+ E+ + +D +    + N
Sbjct: 73  GDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ-KDCHPDAAVYN 131

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++  L   G ID A N+L+                M+ + +  P+  ++  +I    + 
Sbjct: 132 CLIAGLCKMGKIDAARNVLK----------------MMLERSCVPDVITYTSLIVGCCQT 175

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             LD A  L  +M + G   +   YN L++GLC  N+LEE  +LL EM E+G +P  F+ 
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++  CLC       A  ++ KM  +   P V     L+   CK  K  EA R L DMV 
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
               P ++ Y+  IGG     R+  A  +  D+   G  PD+V YN ++ GLCKA ++ E
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +L   M+ K   P V TY++L+NG CK G +D A L L  MLE+    P+++T+ T+I
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER-GCQPNLVTFNTMI 414

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG C AG+ D+   +   M+E  C P+ +T+  LI G CK +R + A          G+ 
Sbjct: 415 DGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GIS 468

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           PD   + +++    S      A EV+  M
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLM 497



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 69/358 (19%)

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV-KHNT-- 433
           E Y   RE      KP++ T  ++     R  +    L +  +M  +   P V  HNT  
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 434 ------------------------------LLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                                         +LI  LC+  +  EA++ L +M+Q+   PD
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126

Query: 464 IVCYSAAIGGLIDIKRVDLALELFR---------DICAH-----GCC------------- 496
              Y+  I GL  + ++D A  + +         D+  +     GCC             
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLME 186

Query: 497 --------PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
                   PD VAYN +++GLCK  ++ E   L  EM+  G  P   +YN ++   C+SG
Sbjct: 187 KMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESG 246

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
             ++A   L +M+EK+ G PDV+TY +L+DG C   + D+A  L  +M  + CAP  IT+
Sbjct: 247 KYEEAGKILEKMIEKKCG-PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LI G  + DR   A      M + G+ PD+  +  L+           A E+L+ M
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 114/256 (44%), Gaps = 34/256 (13%)

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           + +E + F  +   +   P    Y A I G        + LE+  ++ A    PDV+ +N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 504 ---------------------------------IIISGLCKAQRVAEAEDLFNEMITKGL 530
                                            I+I GLC+ QR+ EA  L +EMI K  
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P  A YN LI G CK G ID A   L  MLE+ S  PDVITYT+LI G C     D+A 
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNALDEAR 182

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  +M+E G  P+ + + AL+ GLCK ++          M E G +PD F +  +++  
Sbjct: 183 KLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACL 242

Query: 651 LSELNPPLAFEVLKEM 666
                   A ++L++M
Sbjct: 243 CESGKYEEAGKILEKM 258


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 204/754 (27%), Positives = 323/754 (42%), Gaps = 122/754 (16%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P A+ +  L+  L   G  +EA  L +++   G C P   ++  +++ LCK   ++   
Sbjct: 68  APNAVTYNTLVNALLGQGRAKEAFSLLERMAANG-CPPELITFGLIIKGLCKEGEIEAAF 126

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
             + EM D G+  D    T LL   C  G+ D+A   F +++  G+  + V ++ ++   
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G ++ A  +++ + +        TF + + G  K   +  A + FD M ++G + + 
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             YD +I GLCK  +L++AL L  +         F  L   +       E   L+K +  
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC 306

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------- 308
             +V    +  NS+M  L     +D+A+ L   M +    ADV                 
Sbjct: 307 VPNV----VCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362

Query: 309 ----GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-GCMQNVFLYN 363
                VE++   +G  SPN  +F  +I  L   G+++ A  ++  M  + G   N F Y 
Sbjct: 363 EAYRHVELMRRTEG-CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYA 421

Query: 364 NLIDGLC---NSNRLEESYELLREME---------------------------------- 386
            L++GLC   +S RLE+ +E + E E                                  
Sbjct: 422 FLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVT 481

Query: 387 -------------------ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
                              ESG  P   T NS+   LC+ Q ++ A N+ ++   +G  P
Sbjct: 482 GLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRP 541

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   + LI  L K  K  EA + L  MV+ G   + V YS  + GL+ + R++ A+ + 
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL 601

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           R +   GC PD V YN +I G  K QR+ EA  L  EM+  G  PSV TY  L +G C+S
Sbjct: 602 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 661

Query: 548 GNIDQAM------------------------LC-----------LSRMLEKESGSPDVIT 572
           G  D+A+                        LC             +M   E  +P VI 
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 721

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y+ LIDGLC AGR D+A      M   G  P+ +TF  LI GLC   R    L  F  M 
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMA 781

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           E+G K D++ + A+I+A+  +     A+ +L+EM
Sbjct: 782 ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/667 (28%), Positives = 302/667 (45%), Gaps = 82/667 (12%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY-GWGYDKYTL 104
           V+EA  LFD +K  G C  +  +YN LL+ LCK   +      ++ M+   G   +  T 
Sbjct: 326 VDEAFELFDVMKESG-CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTF 384

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMD 162
           + L+Q  CN+G+ ++A  V+  ++    +  + F+   LL    K G+  +  +  E+M 
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444

Query: 163 DCNIRLNEK---------------------TFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +   R +                       T+  L+ G  K   V  AL L + M +SG 
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS-----DEGEL 256
           + D   ++ ++ GLCK +++  A  ++      G  P+    S LI   S     DE  L
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA-L 563

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            LL K +      NT+T   ++++  L+  G ++ A  +L+ M       D G       
Sbjct: 564 QLLAKMVELGCRANTVTY--STVVDGLLKVGRMEDAVVVLRQM------RDAGC------ 609

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++ +I+   K  +L  A+ L REM + G   +V  Y  L  GLC S R +
Sbjct: 610 ----LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLL 435
           E+ E+L  M   G  P   T +S+   LC+   V  AL    KM R +   P V   + L
Sbjct: 666 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 725

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+  EA+ FL  M++ G +PD+V +S  I GL D  R+D  LELF  +   GC
Sbjct: 726 IDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGC 785

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
             D+ AYN +I+  C     + A  L  EM T G+  +  T+ ++I   C +  ID+A+ 
Sbjct: 786 KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVS 845

Query: 555 -------------------------------LCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                                          L L R +  + GSPD   Y T++DGL  A
Sbjct: 846 YFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKA 905

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G P+ A  L  EM  +G +P+  T+  +I+GL K  +   A  +F  M  K +KPD  V+
Sbjct: 906 GSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVY 965

Query: 644 VALISAF 650
            +LI AF
Sbjct: 966 SSLIDAF 972



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 182/658 (27%), Positives = 297/658 (45%), Gaps = 80/658 (12%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN L+  LCK+  V       ++   +G+     T + ++   C   + DK   +  E+
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G     V ++ L+ A    G   +A  L+ERM          TF ++I G  K+  +
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A ++ D+M   GF  D  ++ V++  LC+  +++ A   + ++   G TPD    + +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 247 ITSCSDEGELTL------LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +      G L        L+ E +    V T T+  + + +     G++  AY    +M 
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKA----GNLTGAYEFFDSMP 238

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIG----- 354
                           +  VSPNT ++D +I+ L K GKLD+AL L R+  +Q G     
Sbjct: 239 ----------------QTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFS 282

Query: 355 -----------------------CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                                  C+ NV  +N+L++GLC + R++E++EL   M+ESG  
Sbjct: 283 SLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCS 342

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
               T N + + LC+ + +  A   V  M R +G  P V   + LI+ LC  G+  +A+ 
Sbjct: 343 ADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWE 402

Query: 451 FLTDMVQ-EGFLPDIVCYSAAIGGLI---DIKRVDLALE--LFRD--------------- 489
               MV  EG  P+   Y+  + GL    D +R++   E  L R+               
Sbjct: 403 VYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVD 462

Query: 490 -ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +    C P +V YN +++GL K+  V +A  L   MI  GL P V T+N +++G CK  
Sbjct: 463 FLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQ 522

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            I  A     R LE+    P+V+TY+TLIDGL    + D+A+ L  +M E GC  N +T+
Sbjct: 523 RILDAHNVFKRALER-GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 581

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             ++ GL K  R   A+V  R M++ G  PD   +  LI  F        A  +L+EM
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 270/583 (46%), Gaps = 27/583 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+  L   G+V +A  L + +   GL  P+  ++N +L+ LCK   +       K   + 
Sbjct: 479  LVTGLSKSGMVRDALGLLEFMIESGLS-PDVITFNSVLDGLCKEQRILDAHNVFKRALER 537

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   +  T + L+       + D+AL +  ++++ G     V +S ++    K G ++ A
Sbjct: 538  GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 597

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              ++ +M D     +  T+  LI GF K+ R+ +A+ L  +M ++GF      Y  +  G
Sbjct: 598  VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 657

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV---KEIWEDRDVNT 271
            LC++ + + A+++   M   G  P+    S ++      G +T  +   +++  D  V  
Sbjct: 658  LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717

Query: 272  MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
              +  ++++  L   G ID+AY  L+ MI+   I                P+  +F I+I
Sbjct: 718  HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI----------------PDVVTFSILI 761

Query: 332  NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            N L   G++D  L LF  M + GC  +++ YN +I+  C       +Y LL EM+  G  
Sbjct: 762  NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821

Query: 392  PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                T   + + LC    +  A++    +     +  + +NTL I  L    ++ +A   
Sbjct: 822  KNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE-ISYNTL-ITSLVASRRSEQALEL 879

Query: 452  LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
            L  MV +G  PD   Y   + GL      ++A +L +++ + G  PD+  Y I+ISGL K
Sbjct: 880  LRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSK 939

Query: 512  AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            A+++  A D F EM+ K L P    Y+ LI+ +CK+  +D A     ++L      P + 
Sbjct: 940  AKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW----KLLRSSGIEPTIT 995

Query: 572  TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             Y+T++D LC     D A+ +  EM+ K C P    + +L T 
Sbjct: 996  MYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATA 1038



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 177/670 (26%), Positives = 300/670 (44%), Gaps = 59/670 (8%)

Query: 29   SPGALGF--LIRCLGSVGLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            SP  + F  LI+ L + G V +A  ++++ V  EG+  PN ++Y  LLE LCK+     +
Sbjct: 378  SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS-PNRFTYAFLLEGLCKAGDSRRL 436

Query: 86   EMRLKEMQDYGWGYDK---------------------YTLTPLLQVYCNSGQFDKALSVF 124
            E   ++M +  W                          T   L+     SG    AL + 
Sbjct: 437  EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496

Query: 125  NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
              +I+ G   D   F+ +L    K   +  A  + +R  +   R N  T+  LI G  K 
Sbjct: 497  EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556

Query: 184  SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +++D+ALQL  KM + G  ++   Y  ++ GL K  ++E A+ +  +M+ +G  PD    
Sbjct: 557  AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 244  SKLITSCSDEGEL---TLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
            + LI        L     L++E+ E      V T T LC+ + R    +G  D+A  +L 
Sbjct: 617  NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR----SGRFDEAVEILD 672

Query: 298  AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
             M                 +G  +PN  ++  I++ L K G++  AL  F +M +   + 
Sbjct: 673  YMAA---------------RG-CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716

Query: 358  -NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +V  Y+ LIDGLC + R++E+YE L  M  +G  P   T + +   LC    +   L L
Sbjct: 717  PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776

Query: 417  VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
               M  +G +  +     +I   C  G+   A+  L +M   G   + V +   I  L  
Sbjct: 777  FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG 836

Query: 477  IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              R+D A+  F  I     C D ++YN +I+ L  ++R  +A +L   M+  G  P    
Sbjct: 837  NDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894

Query: 537  YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            Y  +++G  K+G+ + A   L  M  +   SPD+ TYT +I GL  A +   A   + EM
Sbjct: 895  YMTVMDGLFKAGSPEVAAKLLQEMRSR-GHSPDLRTYTIMISGLSKAKQLPLACDYFEEM 953

Query: 597  EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
              K   P+ I + +LI   CK D+   A   +++++  G++P + ++  ++ +       
Sbjct: 954  LRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGT 1010

Query: 657  PLAFEVLKEM 666
              A EV++EM
Sbjct: 1011 DKALEVIREM 1020



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 28/488 (5%)

Query: 43   VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            VG +E+A ++  Q++  G C+P+  +YN L++   K   +      L+EM + G+     
Sbjct: 591  VGRMEDAVVVLRQMRDAG-CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 103  TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
            T T L    C SG+FD+A+ + + +   G     + +S ++    K G V +A    E+M
Sbjct: 650  TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 162  -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
              D  +  +   +  LI G  K  R+D+A +  ++M ++G   D   + ++I GLC   +
Sbjct: 710  ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 221  LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCN 277
            ++  L+L+  M   G   D    + +I +   +GE +    L++E+ +   +   T+   
Sbjct: 770  IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM-KTHGIAKNTVTHG 828

Query: 278  SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
             +++ L  N  ID+A +   ++ +     D   E+             S++ +I +L+  
Sbjct: 829  IVIKALCGNDRIDEAVSYFHSIPE-----DCRDEI-------------SYNTLITSLVAS 870

Query: 338  GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             + + AL L R M   G   +   Y  ++DGL  +   E + +LL+EM   G  P   T 
Sbjct: 871  RRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTY 930

Query: 398  NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
              M   L + + +  A +   +M  +  +P     + LI   CK  K  +A++ L     
Sbjct: 931  TIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---S 987

Query: 458  EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
             G  P I  YS  +  L   +  D ALE+ R++ +  C P +  +  + +      RV E
Sbjct: 988  SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDE 1047

Query: 518  AEDLFNEM 525
            A  L N++
Sbjct: 1048 AVKLVNDL 1055



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 36/238 (15%)

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y+  I GL    RV  A   FR     G  P VV Y+ +I GLC+   V +   L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 524 EMITKGLIPSVATYNLLIN-----------------------------------GWCKSG 548
           EM  +G  P+  TYN L+N                                   G CK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            I+ A   +  M+++    PDV  +T L+  LC  GR D+A   + ++   G  P+ +T+
Sbjct: 121 EIEAAFRVVDEMVDR-GFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             ++ GL K  R  AA +  +++ E    P +F F   +       N   A+E    M
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 7/229 (3%)

Query: 34   GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
            G +I+ L     ++EA   F  +  +     +  SYN L+ +L  S   +     L+ M 
Sbjct: 828  GIVIKALCGNDRIDEAVSYFHSIPED---CRDEISYNTLITSLVASRRSEQALELLRAMV 884

Query: 94   DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
              G   D      ++     +G  + A  +  E+   G   D   ++I++   SK  ++ 
Sbjct: 885  ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944

Query: 153  KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
             AC+  E M   N++ +   +  LI  F K  +VD A +L   +  SG      MY  ++
Sbjct: 945  LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMV 1001

Query: 213  GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
              LCKN+  + AL++  EMK     P   I + L T+   EG +   VK
Sbjct: 1002 DSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 188/648 (29%), Positives = 297/648 (45%), Gaps = 49/648 (7%)

Query: 46  VEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +EEA  +F      GL  VP       LL+AL +   +DL     K M +    +D  T 
Sbjct: 167 IEEAVFVFSS--SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224

Query: 105 TPLLQVYCNSGQF---------------------DKALSVFNEIIDHGWVD-EHVFSILL 142
             L+  +C +G                       D AL +   +I  G V  ++ + +L+
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               K   ++ A  L+  MD   + L+  T+ +LI G +K    D A  L  +M   G  
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TL 258
               MYD  I  + K   +E A  L+  M  SG+ P  +  + LI     E  +     L
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           LV+   + R++        ++++ + S+G +D AYN+++ MI                  
Sbjct: 405 LVE--MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS---------------- 446

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PN   +  +I T L++ +   A+ + +EM + G   ++F YN+LI GL  + R++E+
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
              L EM E+G KP  FT  +         +   A   V++MR  G  P     T LI E
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK GK +EA      MV +G L D   Y+  + GL    +VD A E+FR++   G  PD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           V +Y ++I+G  K   + +A  +F+EM+ +GL P+V  YN+L+ G+C+SG I++A   L 
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M  K    P+ +TY T+IDG C +G   +A  L++EM+ KG  P+   +  L+ G C+ 
Sbjct: 687 EMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    A+  F   K KG       F ALI+         L  EVL  +
Sbjct: 746 NDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 58/632 (9%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP  Y+Y+ L++ LCK   ++  +  L EM   G   D +T + L+         D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +E++ HG  +  +++   +   SK G ++KA  L + M    +    + +  LI G+ 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++  V +  +L  +M K         Y  ++ G+C +  L+ A  +  EM  SG  P+  
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 242 ILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           I + LI +    S  G+   ++KE+ E + +       NS++  L     +D+A + L  
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M++                  + PN  ++   I+  ++  +   A    +EM + G + N
Sbjct: 513 MVEN----------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
             L   LI+  C   ++ E+    R M + G      T   +   L +   V  A  + R
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +MR +G  P V    +LI    K G   +A     +MV+EG  P+++ Y+  +GG     
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A EL  ++   G  P+ V Y  II G CK+  +AEA  LF+EM  KGL+P    Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 539 LLINGWCKSGNIDQAML----------------------------------CLSRMLE-- 562
            L++G C+  ++++A+                                    L+R+++  
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 563 -KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
               G P+ +TY  +ID LC  G  + A  L+++M+     P  IT+ +L+ G  K  R 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                 F      G++PD  ++  +I+AFL E
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 160/673 (23%), Positives = 280/673 (41%), Gaps = 64/673 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + R     + L  ++V     + P      I  +   G++E+A  LFD +   GL +P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL-IP 380

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y  L+E  C+  +V      L EM+        YT   +++  C+SG  D A ++ 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI- 439

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                                            ++ M     R N   +  LI  F++ S
Sbjct: 440 ---------------------------------VKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R   A+++  +M + G A D   Y+ +I GL K K+++ A     EM  +G+ P+     
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
             I+   +  E     K + E R+   +   +LC  ++      G + +A +  ++M+  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + D                  ++ +++N L K+ K+D A  +FREM   G   +VF Y
Sbjct: 587 GILGD----------------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LI+G      ++++  +  EM E G  P     N +    CR  ++  A  L+ +M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P       +I   CK G   EAFR   +M  +G +PD   Y+  + G   +  V+ 
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL----IPSVATYN 538
           A+ +F      GC      +N +I+ + K  +     ++ N ++         P+  TYN
Sbjct: 751 AITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I+  CK GN++ A     +M +  +  P VITYT+L++G    GR  +   +++E   
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-----GMKPDMFVFVALISAFLSE 653
            G  P+ I +  +I    K      ALV    M  K     G K  +    AL+S F   
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 654 LNPPLAFEVLKEM 666
               +A +V++ M
Sbjct: 929 GEMEVAEKVMENM 941



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 235/576 (40%), Gaps = 69/576 (11%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K    +SP   G +++ + S G ++ A  +  ++   G C PN   Y  L++   ++   
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRF 468

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
                 LKEM++ G   D +    L+     + + D+A S   E++++G   +   +   
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSG 200
           +  + +  E   A + ++ M +C + L  K  C  LI+ + KK +V +A   +  M   G
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---T 257
              DA  Y V++ GL KN +++ A +++ EM+G GI PD      LI   S  G +   +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIF 316
            +  E+ E+  +    ++ N ++     +G I++A  LL  M +KG              
Sbjct: 648 SIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-------------- 692

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  ++  II+   K G L  A  LF EM   G + + F+Y  L+DG C  N +E
Sbjct: 693 ---LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 377 ESY----------------------------------ELLREMEESGF----KPTHFTLN 398
            +                                   E+L  + +  F    KP   T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M   LC+  ++  A  L  +M+     P V   T L+    K G+  E F    + +  
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-----GCCPDVVAYNIIISGLCKAQ 513
           G  PD + YS  I   +       AL L   + A      GC   +     ++SG  K  
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +  AE +   M+    IP  AT   LIN  C S N
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 24/202 (11%)

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V +     G I  + ++ A+ +F         P +    +++  L +  R+    D++
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--------------- 567
             M+ + ++  V TY++LI   C++GN+      L +  EKE  +               
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EKEFRTATLNVDGALKLKESM 268

Query: 568 ------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P   TY  LIDGLC   R +DA  L  EM+  G + +  T+  LI GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 622 RAA--LVHFRMMKEKGMKPDMF 641
            AA  LVH  +     +KP M+
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMY 350


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 187/639 (29%), Positives = 299/639 (46%), Gaps = 40/639 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D V+   L  P+   +N L+  + +    DLV    ++M+      D Y+
Sbjct: 57  GLEDAIDLFSDMVRSRPL--PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYS 114

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L++ +C+  +   ALS F +I   G+  + V FS LL        V +A +L  +M 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               R N  TF  L++G  ++ RV +A+ L D+M + G   +   Y  I+ G+CK     
Sbjct: 174 ---CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I     +G  +    L  E+ E + +       N 
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE-KGIFPDLFTYNC 289

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G   +A  LLQ M++ +                ++PN  ++  +IN  +K+ 
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERK----------------INPNVVTYSALINAYVKER 333

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   YN++IDG C  NRL+ +  +   M   G  P  FT N
Sbjct: 334 KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFN 393

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +     L+ +M   G          LI   C  G    A      M+  
Sbjct: 394 TLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS 453

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV  +  + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P+  TY+ +ING CK   +D+A      M  K S S
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK-SFS 572

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+T+ TL+ G C AGR DD + L+ EM  +G   + IT++ LI G  K      AL  
Sbjct: 573 PDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDI 632

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD     ++++   S+     A  +L+++
Sbjct: 633 FQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 280/616 (45%), Gaps = 82/616 (13%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGLCVP-NNYSYNCL 72
           L  D+V+SR    P  + F  + +G V  +E  ++   L+ +++R+   +P + YS+N L
Sbjct: 64  LFSDMVRSRPL--PSVIDF-NKLMGVVVRMERPDLVISLYQKMERKQ--IPCDVYSFNIL 118

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G+  D  T + LL   C   +  +AL +F+++     
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNV 178

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V    F+ L+    + G V +A  L++RM +  ++ N+ T+  ++ G  K      AL L
Sbjct: 179 V---TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 193 FDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
             KM + S    +  +Y  II GL K+ +   A  LY+EM+  GI PD    + +I    
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 252 DEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             G   E   L++E+ E R +N   +  ++++   V      +A  L   M+        
Sbjct: 296 SSGRWSEAQRLLQEMLE-RKINPNVVTYSALINAYVKERKFFEAEELYDEMLP------- 347

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   +G + PNT +++ +I+   K  +LD A  +F  M   GC  +VF +N LIDG
Sbjct: 348 --------RGII-PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-------- 420
            C + R+++  ELL EM E+G      T N++    C   D+  AL+L ++M        
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458

Query: 421 --------------------------------------RVQGHEPWVKHNTLLIKELCKH 442
                                                    G EP V+   +LI  L   
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK +EA     +M   G +P+ + YS+ I GL    R+D A ++F  + +    PDVV +
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N ++SG CKA RV +  +LF EM  +G++    TY  LI+G+ K GNI+ A+     M+ 
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI- 637

Query: 563 KESG-SPDVITYTTLI 577
             SG  PD IT  +++
Sbjct: 638 -SSGVYPDTITIRSML 652



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 5/194 (2%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P V+ +N ++  + + +R      L+ +M  K +  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V ++N+LI  +C    +  A+    + + K    PDV+T++TL+ GLC+  R  +A+ L
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGK-ITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M    C PN +TF  L+ GLC+  R   A+     M E G++P+   +  ++     
Sbjct: 170 FHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225

Query: 653 ELNPPLAFEVLKEM 666
             +   A  +L++M
Sbjct: 226 IGDTVSALNLLRKM 239


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 177/617 (28%), Positives = 286/617 (46%), Gaps = 23/617 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A     +R + +++  S C    G     +   G   L +E   +   ++ E    P
Sbjct: 107 LGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKP 166

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   YN LL  L  +  + LVE     M      +D  T   L++  C + Q   A+ + 
Sbjct: 167 DTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMM 226

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+  +G   DE  F+ ++  + + G +D A  + E+M +      + T  VLI+GF K+
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+D+AL    +    GF  D   Y+ ++ GLCK    + A+++   M   G+ PD    
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + LI+     GE+   VK + +   RD +   +  N+I+  L     +D+A  + +    
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR---- 402

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                      L+  KG + P+  +F+ +I  L        A+ LF EM   GC  + F 
Sbjct: 403 -----------LLTSKGIL-PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LID LC+S +LEE+  LL+EME +G        N++    C+ + +  A  +  +M 
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510

Query: 422 VQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +QG     V +NTL I  LCK  +  +A + +  M+ EG  PD   Y++ +        +
Sbjct: 511 LQGVSRDSVTYNTL-IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDI 569

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++ + + + GC PD+V Y  +ISGLCKA RV  A  L   +  KG++ +   YN +
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPV 629

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           I    K     +AM     ML+K S  PD ITY  +  GLC  G P  +A+    EM E+
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDK-SEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688

Query: 600 GCAPNRITFMALITGLC 616
           G  P   +F+ L  GLC
Sbjct: 689 GNIPEFSSFVMLAEGLC 705



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/615 (25%), Positives = 276/615 (44%), Gaps = 34/615 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY-------CNSG 115
           +P +++   L+E L +    ++  +R+     + W   +    P   VY         +G
Sbjct: 58  LPPDFTPKQLIETLRRQTD-EVAALRV-----FNWASKQPNFVPSSSVYEEILRKLGKAG 111

Query: 116 QFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDD-CNIRLNEKTF 173
            F+    V  E+   G   D  +F I + ++ K+   D+   +++ M+D   I+ + + +
Sbjct: 112 SFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFY 171

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
            VL++  V  +++         M +     D + ++++I  LCK  Q+  A+ +  EM  
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231

Query: 234 SGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G++PD    + ++    + G L   L +KE   +       +  N ++      G IDQ
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A + +Q  +                     P+  +++ ++N L K G    A+ +   M 
Sbjct: 292 ALSFIQEAVSE----------------GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +++ YN+LI GLC    +EE+ ++L +M      P   T N++   LC+   V 
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  + R +  +G  P V     LI+ LC       A     +M  +G  PD   Y+  I
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L   ++++ AL L +++  +GC  +VV YN +I G CK +R+ EAE++F+EM  +G+ 
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
               TYN LI+G CKS  ++ A   + +M+  E   PD  TY +L+   C  G    A  
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMI-MEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +   M   GC P+ +T+  LI+GLCK  R + A    R ++ KGM      +  +I A  
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF 634

Query: 652 SELNPPLAFEVLKEM 666
                  A  + +EM
Sbjct: 635 KRNRTHEAMRLFREM 649


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 186/639 (29%), Positives = 299/639 (46%), Gaps = 36/639 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F +I   G   D   F+ LL        V +A  L  +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   Y+++IDG C  NRL+ +  +   M   G  P   T N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +   + L+ +M   G          LI      G    A   L +M+  
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV     + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S S
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+V+T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD      +++   S+     A  +L+++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 278/620 (44%), Gaps = 80/620 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G V  +E  ++   L+ +++R+ + C  + YS+  L
Sbjct: 66  LFSDMLRSRPL--PSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIRC--DIYSFTIL 120

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T   LL   C   +  +AL++F+++ +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V F+ L+    + G + +A  L++RM +  ++  + T+  ++ G  KK     AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 LFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           L  KM + S    +  +Y  II  LCK+ +   A  L++EM+  GI PD    + +I   
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 SDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+       
Sbjct: 301 CSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP------ 353

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + PNT ++  +I+   K  +LD A  +F  M   GC  N+  +N LID
Sbjct: 354 ---------RGII-PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C + R+++  ELL EM E+G      T N++        D+  AL+L+++M       
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 421 ---------------------------------------RVQGHEPWVKHNTLLIKELCK 441
                                                     G EP V+   +LI  L  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I+G CKA RV +  +LF EM  +G++ +  TY  LI G+ K GNI+ A+     M+
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643

Query: 562 EKESG-SPDVITYTTLIDGL 580
              SG  PD IT   ++ GL
Sbjct: 644 --SSGVYPDTITIRNMLTGL 661



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 230/528 (43%), Gaps = 40/528 (7%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R++    L   + ++ C  +      L+  L   G + EA  L D++  +GL  P   +Y
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITY 222

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL-TPLLQVYCNSGQFDKALSVFNEII 128
             +++ +CK          L++M++         + + ++   C  G+   A ++F E+ 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           + G + D   ++ ++V F   G    A +L++ M +  I  +  T+  LI+ FVK+ +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A +L+D+M   G   +   Y  +I G CK  +L+ A  ++  M   G +P+    + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 248 TS-CS----DEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
              C     D+G EL   + E     D  T   L +    +    G ++ A +LLQ MI 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV----GDLNAALDLLQEMIS 458

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-------- 353
                             + P+  + D +++ L  +GKL  AL +F+ M +         
Sbjct: 459 S----------------GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 354 ---GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +V  YN LI GL N  +  E+ EL  EM   G  P   T +SM   LC++  +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  +   M  +   P V   T LI   CK G+  +      +M + G + + + Y   
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           I G   +  ++ AL++F+++ + G  PD +    +++GL   + +  A
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 189/430 (43%), Gaps = 68/430 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM +     D  T
Sbjct: 269 GRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVD---------------------EHVFSIL- 141
              L+  +   G+F +A  +++E++  G +                      EH+F ++ 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 142 -------LVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                  L+ F+           +D   EL+  M +  +  +  T+  LIHGF     ++
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-----------GI 236
            AL L  +M  SG   D    D ++ GLC N +L+ AL+++  M+ S           G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAY 293
            PD +  + LI+   +EG+  L  +E++E+   R +   T+  +S++  L     +D+A 
Sbjct: 508 EPDVQTYNILISGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +  +M                   + SPN  +F  +IN   K G++D  L LF EM + 
Sbjct: 567 QMFDSM----------------GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + N   Y  LI G      +  + ++ +EM  SG  P   T+ +M   L  ++++  A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 414 LNLVRKMRVQ 423
           + ++ K+++ 
Sbjct: 671 VAMLEKLQMS 680



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 1/194 (0%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P VV +  ++  + + +R      L+ +M  K +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +LI  +C    +  A+    + + K    PDV+T+ TL+ GLC+  R  +A+ L
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGK-ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++     
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 653 ELNPPLAFEVLKEM 666
           + +   A  +L++M
Sbjct: 232 KGDTVSALNLLRKM 245


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 190/661 (28%), Positives = 300/661 (45%), Gaps = 49/661 (7%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            G L     + G +EEA  +F      GL  VP       LL+AL +   +DL     K 
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSS--SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQF---------------------DKALSVFNEIIDH 130
           M +    +D  T   L+  +C +G                       D AL +   +I  
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271

Query: 131 GWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G V  ++ + +L+    K   ++ A  L+  MD   + L+  T+ +LI G +K    D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             L  +M   G      MYD  I  + K   +E A  L+  M  SG+ P  +  + LI  
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              E  +     LLV+   + R++        ++++ + S+G +D AYN+++ MI     
Sbjct: 392 YCREKNVRQGYELLVE--MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS--- 446

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           PN   +  +I T L++ +   A+ + +EM + G   ++F YN+L
Sbjct: 447 -------------GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I GL  + R++E+   L EM E+G KP  FT  +         +   A   V++MR  G 
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P     T LI E CK  K +EA      MV +G L D   Y+  + GL    +VD A E
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +FR++   G  PDV +Y ++I+G  K   + +A  +F+EM+ +GL P+V  YN+L+ G+C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +SG I++A   L  M  K    P+ +TY T+IDG C +G   +A  L++EM+ KG  P+ 
Sbjct: 674 RSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             +  L+ G C+ +    A+  F   K KG       F ALI+         L  EVL  
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNR 791

Query: 666 M 666
           +
Sbjct: 792 L 792



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 58/632 (9%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP  Y+Y+ L++ LCK   ++  +  L EM   G   D +T + L+         D A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +E++ HG  +  +++   +   SK G ++KA  L + M    +    + +  LI G+ 
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++  V +  +L  +M K         Y  ++ G+C +  L+ A  +  EM  SG  P+  
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 242 ILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           I + LI +    S  G+   ++KE+ E + +       NS++  L     +D+A + L  
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M++                  + PN  ++   I+  ++  +   A    +EM + G + N
Sbjct: 513 MVEN----------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
             L   LI+  C   ++ E+    R M + G      T   +   L +   V  A  + R
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +MR +G  P V    +LI    K G   +A     +MV+EG  P+++ Y+  +GG     
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A EL  ++   G  P+ V Y  II G CK+  +AEA  LF+EM  KGL+P    Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 539 LLINGWCKSGNIDQAML----------------------------------CLSRMLE-- 562
            L++G C+  ++++A+                                    L+R+++  
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 563 -KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
               G P+ +TY  +ID LC  G  + A  L+++M+     P  IT+ +L+ G  K  R 
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                 F      G++PD  ++  +I+AFL E
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 159/673 (23%), Positives = 279/673 (41%), Gaps = 64/673 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + R     + L  ++V     + P      I  +   G++E+A  LFD +   GL +P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL-IP 380

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y  L+E  C+  +V      L EM+        YT   +++  C+SG  D A ++ 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI- 439

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                                            ++ M     R N   +  LI  F++ S
Sbjct: 440 ---------------------------------VKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R   A+++  +M + G A D   Y+ +I GL K K+++ A     EM  +G+ P+     
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
             I+   +  E     K + E R+   +   +LC  ++        + +A +  ++M+  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ 586

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + D                  ++ +++N L K+ K+D A  +FREM   G   +VF Y
Sbjct: 587 GILGD----------------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LI+G      ++++  +  EM E G  P     N +    CR  ++  A  L+ +M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P       +I   CK G   EAFR   +M  +G +PD   Y+  + G   +  V+ 
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL----IPSVATYN 538
           A+ +F      GC      +N +I+ + K  +     ++ N ++         P+  TYN
Sbjct: 751 AITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I+  CK GN++ A     +M +  +  P VITYT+L++G    GR  +   +++E   
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-----GMKPDMFVFVALISAFLSE 653
            G  P+ I +  +I    K      ALV    M  K     G K  +    AL+S F   
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 654 LNPPLAFEVLKEM 666
               +A +V++ M
Sbjct: 929 GEMEVAEKVMENM 941



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 235/576 (40%), Gaps = 69/576 (11%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K    +SP   G +++ + S G ++ A  +  ++   G C PN   Y  L++   ++   
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRF 468

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
                 LKEM++ G   D +    L+     + + D+A S   E++++G   +   +   
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSG 200
           +  + +  E   A + ++ M +C + L  K  C  LI+ + KK +V +A   +  M   G
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---T 257
              DA  Y V++ GL KN +++ A +++ EM+G GI PD      LI   S  G +   +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIF 316
            +  E+ E+  +    ++ N ++     +G I++A  LL  M +KG              
Sbjct: 648 SIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-------------- 692

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  ++  II+   K G L  A  LF EM   G + + F+Y  L+DG C  N +E
Sbjct: 693 ---LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749

Query: 377 ESY----------------------------------ELLREMEESGF----KPTHFTLN 398
            +                                   E+L  + +  F    KP   T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M   LC+  ++  A  L  +M+     P V   T L+    K G+  E F    + +  
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-----GCCPDVVAYNIIISGLCKAQ 513
           G  PD + YS  I   +       AL L   + A      GC   +     ++SG  K  
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +  AE +   M+    IP  AT   LIN  C S N
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 24/202 (11%)

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V +     G I    ++ A+ +F         P +    +++  L +  R+    D++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--------------- 567
             M+ + ++  V TY++LI   C++GN+      L +  EKE  +               
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EKEFRTATLNVDGALKLKESM 268

Query: 568 ------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P   TY  LIDGLC   R +DA  L  EM+  G + +  T+  LI GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 622 RAA--LVHFRMMKEKGMKPDMF 641
            AA  LVH  +     +KP M+
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMY 350


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 175/617 (28%), Positives = 286/617 (46%), Gaps = 23/617 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +      +R + Q++  + C +  G    LI       L +EA  + D ++ E     
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKL 174

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++YN LL  L     + LVE+    M   G   D  T   L++  C + Q   A+ + 
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+  +G   DE  F+ L+  F + G ++ A  + E+M       +  T  VL+HG+ K+
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKE 294

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+++ L   D+M+  GF  D   ++ ++ GLC+   ++ AL++   M   G  PD    
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 244 SKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LI      GE+   V EI      RD +  T+  N+++  L     +++A  L + + 
Sbjct: 355 NSLIFGLCKLGEVEEAV-EILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG + P+  +F+ +I  L       LA+ LF EM   GC  + F
Sbjct: 414 S---------------KG-ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LID LC+  RLEE+  LL+EME SG      T N++    C+ + +  A  +  +M
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            +QG    V     LI  LCK+ +  EA + +  M+ EG  PD   Y++ +        +
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++ + + ++GC PD V Y  +I GL KA RV  A  L   +  KG++ +  TYN +
Sbjct: 578 KKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPV 637

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           I    +     +A+     M+EK    PD +TY  +  GLC  G P  +A+    EM +K
Sbjct: 638 IKALFREKRTSEAVRLFREMMEK-GDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696

Query: 600 GCAPNRITFMALITGLC 616
           G  P+  +F+ L  GLC
Sbjct: 697 GFLPDFSSFLMLAEGLC 713



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 285/618 (46%), Gaps = 40/618 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY-------CNSG 115
           +P N++   L +AL +    D +      +    W   +    P   +Y          G
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSI------LDLLDWASKQPNFVPSSVIYEEVLRKLGKDG 119

Query: 116 QFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDD-CNIRLNEKTF 173
            F     V  E+   G  +    F IL+ +++K+   D+A  +++ M++   ++L+  T+
Sbjct: 120 SFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTY 179

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             L++  V  +++     +  +M   G   D   ++++I  LC+  Q+  A+ +  EM  
Sbjct: 180 NFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGS 239

Query: 234 SGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G++PD +  + L+    +EG +   L ++E        +  +  N ++      G I++
Sbjct: 240 YGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEE 299

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             + +  M      ++ G            P+  +F+ ++N L + G +  AL +   M 
Sbjct: 300 VLSFIDEM------SNEGFR----------PDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           Q G   ++F YN+LI GLC    +EE+ E+L +M    F P   T N++   LC+   V 
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELC---KHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            A  L R +  +G  P V     LI+ LC    H  AME F    +M  +G  PD   Y+
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE---EMKTKGCHPDEFTYN 460

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I  L    R++ AL L +++ + GC  +VV YN +I G CK +R+ EAE++F+EM  +
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+  +V TYN LI+G CK+  +++A   + +ML  E   PD  TY +L+   C AG    
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML-MEGLKPDKFTYNSLLTYFCRAGDIKK 579

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  +   M   GC P+ +T+  LI GL K  R   A    R ++ KGM      +  +I 
Sbjct: 580 AADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIK 639

Query: 649 AFLSELNPPLAFEVLKEM 666
           A   E     A  + +EM
Sbjct: 640 ALFREKRTSEAVRLFREM 657


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 186/639 (29%), Positives = 299/639 (46%), Gaps = 36/639 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F +I   G   D   F+ LL        V +A  L  +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   Y+++IDG C  NRL+ +  +   M   G  P   T N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +   + L+ +M   G          LI      G    A   L +M+  
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV     + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S S
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+V+T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD      +++   S+     A  +L+++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 189/430 (43%), Gaps = 68/430 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM +     D  T
Sbjct: 269 GRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVD---------------------EHVFSIL- 141
              L+  +   G+F +A  +++E++  G +                      EH+F ++ 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 142 -------LVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                  L+ F+           +D   EL+  M +  +  +  T+  LIHGF     ++
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-----------GI 236
            AL L  +M  SG   D    D ++ GLC N +L+ AL+++  M+ S           G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAY 293
            PD +  + LI+   +EG+  L  +E++E+   R +   T+  +S++  L     +D+A 
Sbjct: 508 EPDVQTYNILISGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +  +M                   + SPN  +F  +IN   K G++D  L LF EM + 
Sbjct: 567 QMFDSM----------------GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + N   Y  LI G      +  + ++ +EM  SG  P   T+ +M   L  ++++  A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 414 LNLVRKMRVQ 423
           + ++ K+++ 
Sbjct: 671 VAMLEKLQMS 680



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 37/230 (16%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCP----------------------------------- 497
           G  +IK ++ A++LF D+      P                                   
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+ ++ I+I   C   ++  A   F ++   GL P V T+N L++G C    + +A+   
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M E  +  P+V+T+TTL++GLC  GR  +A+ L + M E G  P +IT+  ++ G+CK
Sbjct: 173 HQMFET-TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 618 CDRPRAALVHFRMMKE-KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                +AL   R M+E   + P++ ++ A+I +   +     A  +  EM
Sbjct: 232 IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 36/195 (18%)

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVA------------------------------- 535
           SG  + + + +A DLF++M+    +PSV                                
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 536 ----TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
               ++ +LI  +C    +  A+    + + K    PDV+T+ TL+ GLC+  R  +A+ 
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGK-ITKLGLHPDVVTFNTLLHGLCVEDRVSEALN 170

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++    
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 652 SELNPPLAFEVLKEM 666
              +   A ++L++M
Sbjct: 231 KIGDTVSALDLLRKM 245


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 185/639 (28%), Positives = 299/639 (46%), Gaps = 36/639 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F ++   G   D   F+ LL        V +A  L  +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   Y+++IDG C  NRL+ +  +   M   G  P   T N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +   + L+ +M   G          LI      G    A   L +M+  
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV     + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S S
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+V+T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD      +++   S+     A  +L+++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 278/620 (44%), Gaps = 80/620 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G V  +E  ++   L+ +++R+ + C  + YS+  L
Sbjct: 66  LFSDMLRSRPL--PSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIRC--DIYSFTIL 120

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T   LL   C   +  +AL++F+++ +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V F+ L+    + G + +A  L++RM +  ++  + T+  ++ G  KK     AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 LFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           L  KM + S    +  +Y  II  LCK+ +   A  L++EM+  GI PD    + +I   
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 SDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+       
Sbjct: 301 CSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP------ 353

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + PNT ++  +I+   K  +LD A  +F  M   GC  N+  +N LID
Sbjct: 354 ---------RGII-PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C + R+++  ELL EM E+G      T N++        D+  AL+L+++M       
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 421 ---------------------------------------RVQGHEPWVKHNTLLIKELCK 441
                                                     G EP V+   +LI  L  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I+G CKA RV +  +LF EM  +G++ +  TY  LI G+ K GNI+ A+     M+
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643

Query: 562 EKESG-SPDVITYTTLIDGL 580
              SG  PD IT   ++ GL
Sbjct: 644 --SSGVYPDTITIRNMLTGL 661



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 230/528 (43%), Gaps = 40/528 (7%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R++    L   + ++ C  +      L+  L   G + EA  L D++  +GL  P   +Y
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITY 222

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL-TPLLQVYCNSGQFDKALSVFNEII 128
             +++ +CK          L++M++         + + ++   C  G+   A ++F E+ 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           + G + D   ++ ++V F   G    A +L++ M +  I  +  T+  LI+ FVK+ +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A +L+D+M   G   +   Y  +I G CK  +L+ A  ++  M   G +P+    + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 248 TS-CS----DEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
              C     D+G EL   + E     D  T   L +    +    G ++ A +LLQ MI 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV----GDLNAALDLLQEMIS 458

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-------- 353
                             + P+  + D +++ L  +GKL  AL +F+ M +         
Sbjct: 459 S----------------GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 354 ---GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +V  YN LI GL N  +  E+ EL  EM   G  P   T +SM   LC++  +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  +   M  +   P V   T LI   CK G+  +      +M + G + + + Y   
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           I G   +  ++ AL++F+++ + G  PD +    +++GL   + +  A
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 68/438 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD--------------------- 134
               D  T   L+  +   G+F +A  +++E++  G +                      
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379

Query: 135 EHVFSIL--------LVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           EH+F ++        L+ F+           +D   EL+  M +  +  +  T+  LIHG
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS----- 234
           F     ++ AL L  +M  SG   D    D ++ GLC N +L+ AL+++  M+ S     
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499

Query: 235 ------GITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVS 285
                 G+ PD +  + LI+   +EG+  L  +E++E+   R +   T+  +S++  L  
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +D+A  +  +M                   + SPN  +F  +IN   K G++D  L 
Sbjct: 559 QSRLDEATQMFDSM----------------GSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EM + G + N   Y  LI G      +  + ++ +EM  SG  P   T+ +M   L 
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 406 RRQDVVGALNLVRKMRVQ 423
            ++++  A+ ++ K+++ 
Sbjct: 663 SKEELKRAVAMLEKLQMS 680



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 1/194 (0%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P VV +  ++  + + +R      L+ +M  K +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +LI  +C    +  A+    + L K    PDV+T+ TL+ GLC+  R  +A+ L
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGK-LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++     
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 653 ELNPPLAFEVLKEM 666
           + +   A  +L++M
Sbjct: 232 KGDTVSALNLLRKM 245


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 166/587 (28%), Positives = 272/587 (46%), Gaps = 86/587 (14%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F E++    +   V F+ LL A +K  + D    L ERM +  I  +  ++ 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL +  KM K G+  D      ++ G C +K++  A+ L  +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD                                 T+  N+++  L  +    +A  
Sbjct: 180 GYKPD---------------------------------TVTFNTLIHGLFLHNKASEAVA 206

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M++               +G   P+  ++  ++N L K G +DLALSL ++M +  
Sbjct: 207 LVDQMVQ---------------RG-CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V +YN +IDGLC    +++++ L  +ME  G +P  FT NS+  CLC       A 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V   + LI    K GK +EA +   +M++    PDI  YS+ I G 
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI--- 531
               R+D A  +F  + +  C P+VV YN +I G CKA+RV E  +LF EM  +GL+   
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 532 --------------------------------PSVATYNLLINGWCKSGNIDQAMLCLSR 559
                                           P + TY++L++G CK G +++A++    
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-E 489

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L+K    PD+ TY  +I+G+C AG+ +D   L+  +  KG  PN I +  +I+G C+  
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A   FR MKE G  PD   +  LI A L + +   + E++KEM
Sbjct: 550 LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 234/487 (48%), Gaps = 21/487 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YSYN L+   C+   + L    L +M   G+  D  TL+ LL  YC+S +   A+++ ++
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 175

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +++ G+  + V F+ L+       +  +A  L+++M     + +  T+  +++G  K+  
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D AL L  KM K    +D  +Y+ II GLCK K ++ A  L+++M+  GI PD    + 
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295

Query: 246 LITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           LI+   + G   + + L+  + E R +N   +  ++++   V  G + +A  L   MIK 
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                           ++ P+  ++  +IN      +LD A  +F  M    C  NV  Y
Sbjct: 355 ----------------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI G C + R+EE  EL REM + G      T N++ + L +  D   A  + +KM  
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P +   ++L+  LCK+GK  +A      + +    PDI  Y+  I G+    +V+ 
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             +LF  +   G  P+V+ Y  +ISG C+     EA+ LF EM   G +P    YN LI 
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578

Query: 543 GWCKSGN 549
              + G+
Sbjct: 579 ARLRDGD 585



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 192/415 (46%), Gaps = 50/415 (12%)

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           N  +D A  L   M++  P+                P+   F+ +++ + K  K DL +S
Sbjct: 58  NLKLDDAIGLFGEMVQSRPL----------------PSIVEFNKLLSAIAKMKKFDLVIS 101

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M  +    +++ YN LI+  C  ++L  +  +L +M + G++P   TL+S+    C
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             + +  A+ LV +M   G++P       LI  L  H KA EA   +  MVQ G  PD+V
Sbjct: 162 HSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 221

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y A + GL     +DLAL L + +       DVV YN II GLCK + + +A  LFN+M
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE----------------------- 562
            TKG+ P V TYN LI+  C  G    A   LS M+E                       
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 563 -----------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                      K S  PD+ TY++LI+G C+  R D+A  ++  M  K C PN +T+  L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I G CK  R    +  FR M ++G+  +   +  LI       +  +A ++ K+M
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 22/433 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  L DQ+ + G C P+  +Y  ++  LCK   +DL    LK+M+      D      +
Sbjct: 203 EAVALVDQMVQRG-CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 261

Query: 108 LQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   C     D A ++FN++   G   D   ++ L+     +G    A  L+  M +  I
Sbjct: 262 IDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI 321

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  TF  LI  FVK+ ++ +A +L+D+M K     D   Y  +I G C + +L+ A  
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381

Query: 227 LYSEMKGSGITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           ++  M      P+    + LI   C  +   E   L +E+ + R +   T+  N++++ L
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGL 440

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  D A  + + M+                   V P+  ++ I+++ L K GKL+ A
Sbjct: 441 FQAGDCDMAQKIFKKMVSD----------------GVPPDIITYSILLDGLCKYGKLEKA 484

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +F  + +     +++ YN +I+G+C + ++E+ ++L   +   G KP      +M   
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            CR+     A  L R+M+  G  P       LI+   + G    +   + +M   GF+ D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604

Query: 464 IVCYSAAIGGLID 476
               S  I  L D
Sbjct: 605 ASTISMVINMLHD 617



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 163/358 (45%), Gaps = 28/358 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  LF++++ +G+  P+ ++YN L+  LC           L  M +     +  T +
Sbjct: 271 IDDAFALFNKMETKGI-RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFS 329

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDD 163
            L+  +   G+  +A  +++E+I    +D  +F  S L+  F     +D+A  + E M  
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            +   N  T+  LI GF K  RV++ ++LF +M++ G   +   Y+ +I GL +    +M
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMR 281
           A +++ +M   G+ PD    S L+      G+L   L+V E  +   +       N ++ 
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508

Query: 282 ILVSNGSIDQAYNLL---------------QAMIKGEPIADVGVEMLMIFK-----GTVS 321
            +   G ++  ++L                  MI G     +  E   +F+     GT+ 
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL- 567

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           P++  ++ +I   L+DG    +  L +EM   G + +    + +I+ L +  RLE+SY
Sbjct: 568 PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 37/245 (15%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++   CF +      LI+       VEE   LF ++ + GL V N  +YN L++ L ++ 
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAG 444

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
             D+ +   K+M   G   D  T + LL   C  G+ +KAL VF  +       D + ++
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           I++    K G+V+   +L   +    ++ N   +  +I GF +K   ++A  LF +M + 
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 200 G-----------------------------------FASDAAMYDVIIGGLCKNKQLEMA 224
           G                                   F  DA+   ++I  L   +  +  
Sbjct: 565 GTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624

Query: 225 LQLYS 229
           L++ S
Sbjct: 625 LEMLS 629


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 188/680 (27%), Positives = 319/680 (46%), Gaps = 61/680 (8%)

Query: 14   LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL----CVPNNYSY 69
            L+ L  D+V     MS          L + GL+ E   L+ ++K+EGL    C  ++   
Sbjct: 566  LKGLKPDIVTYTTMMSG---------LCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDI 616

Query: 70   NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD----------- 118
                E + K  S       LK+++    G  K  L+ LL+ +     +D           
Sbjct: 617  TLSAELIKKMLSCGYAPSLLKDIKS---GVCKKALS-LLRAFSGKTSYDYREKLSRNGLS 672

Query: 119  -----KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
                  A+++F E++        + FS LL A +K  + D    L E+M +  I  N  T
Sbjct: 673  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732

Query: 173  FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
            + +LI+ F ++S++  AL +  KM K G+  +      ++ G C +K++  A+ L  +M 
Sbjct: 733  YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 233  GSGITPDFEILSKLITSC---SDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSN 286
             +G  P+    + LI      +   E   L+  +       D+ T  ++ N     L   
Sbjct: 793  VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG----LCKR 848

Query: 287  GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
            G  D A+NLL  M +G+                + P    ++ II+ L K   +D AL+L
Sbjct: 849  GDTDLAFNLLNKMEQGK----------------LEPGVLIYNTIIDGLCKYKHMDDALNL 892

Query: 347  FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            F+EM   G   NV  Y++LI  LCN  R  ++  LL +M E    P  FT +++     +
Sbjct: 893  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 407  RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
               +V A  L  +M  +  +P +   + LI   C H +  EA +    MV +   PD+V 
Sbjct: 953  EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012

Query: 467  YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
            Y+  I G    KRV+  +E+FR++   G   + V YNI+I GL +A     A+++F EM+
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072

Query: 527  TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            + G+ P++ TYN L++G CK+G +++AM+     L++    P + TY  +I+G+C AG+ 
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKV 1131

Query: 587  DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +D   L+  +  KG  P+ + +  +I+G C+      A   F+ MKE G  P+   +  L
Sbjct: 1132 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 1191

Query: 647  ISAFLSELNPPLAFEVLKEM 666
            I A L + +   + E++KEM
Sbjct: 1192 IRARLRDGDREASAELIKEM 1211



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 181/721 (25%), Positives = 311/721 (43%), Gaps = 126/721 (17%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +G L+        V +A  L D++   G   P+  +YN ++++LCK+  V+      KE
Sbjct: 260 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKE 318

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           ++  G   +  T T L+   CNS ++  A  + +++I        + +S LL AF K G+
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A EL E M   +I  +  T+  LI+G     R+D+A Q+FD M   G  +D   Y+ 
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD-- 268
           +I G CK K++E  ++L+ EM   G+  +    + LI      G++    +E +   D  
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK-AQEFFSQMDFF 497

Query: 269 -VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            ++      N ++  L  NG +++A  + + M K E   D+                 ++
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI----------------VTY 541

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I  + K GK++ A SLF  ++  G   ++  Y  ++ GLC    L E   L  +M++
Sbjct: 542 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 601

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV------------------ 429
            G      TL+          D+  +  L++KM   G+ P +                  
Sbjct: 602 EGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRA 653

Query: 430 ---KHNTLLIKELCKHG----KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD- 481
              K +    ++L ++G    K  +A     +MV+    P I+ +S  +  +  + + D 
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 713

Query: 482 ----------------------------------LALELFRDICAHGCCPDVVAYNIIIS 507
                                             LAL +   +   G  P++V  + +++
Sbjct: 714 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 773

Query: 508 GLCKAQRVAEAEDLFNE-----------------------------------MITKGLIP 532
           G C ++R++EA  L ++                                   M+ KG  P
Sbjct: 774 GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 833

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TY +++NG CK G+ D A   L++M E+    P V+ Y T+IDGLC     DDA+ L
Sbjct: 834 DLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 892

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           + EME KG  PN +T+ +LI+ LC   R   A      M E+ + PD+F F ALI AF+ 
Sbjct: 893 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 653 E 653
           E
Sbjct: 953 E 953



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/603 (26%), Positives = 281/603 (46%), Gaps = 57/603 (9%)

Query: 16   VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN-YSYNCLLE 74
             L  ++VKSR F S      L+  +  +   +    L +Q++  G  +P+N Y+Y+ L+ 
Sbjct: 681  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--IPHNHYTYSILIN 738

Query: 75   ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
              C+   + L    L +M   G+  +  TL+ LL  YC+S +  +A+++ +++   G+  
Sbjct: 739  CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798

Query: 135  EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
              V F+ L+       +  +A  LI+RM     + +  T+ V+++G  K+   D A  L 
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 194  DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +KM +        +Y+ II GLCK K ++ AL L+ EM+  GI P+    S LI SC   
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI-SC--- 914

Query: 254  GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                 LCN         G    A  LL  MI+ +          
Sbjct: 915  ---------------------LCNY--------GRWSDASRLLSDMIERK---------- 935

Query: 314  MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                  ++P+  +F  +I+  +K+GKL  A  L+ EM +     ++  Y++LI+G C  +
Sbjct: 936  ------INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            RL+E+ ++   M      P   T N++ +  C+ + V   + + R+M  +G         
Sbjct: 990  RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049

Query: 434  LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +LI+ L + G    A     +MV +G  P+I+ Y+  + GL    +++ A+ +F  +   
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109

Query: 494  GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
               P +  YNI+I G+CKA +V +  DLF  +  KG+ P V  YN +I+G+C+ G+ ++A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169

Query: 554  MLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
                  M  KE G+ P+   Y TLI      G  + +  L  EM   G A +  T + L+
Sbjct: 1170 DALFKEM--KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLV 1226

Query: 613  TGL 615
            T +
Sbjct: 1227 TNM 1229



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 183/332 (55%), Gaps = 1/332 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  ++  A+SL  +M +IG   ++  YN +ID LC + R+ ++++ 
Sbjct: 256 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 315

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            +E+E  G +P   T  ++   LC       A  L+  M  +   P V   + L+    K
Sbjct: 316 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 375

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +GK +EA     +MV+    PDIV YS+ I GL    R+D A ++F  + + GC  DVV+
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CKA+RV +   LF EM  +GL+ +  TYN LI G+ ++G++D+A    S+M 
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM- 494

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD+ TY  L+ GLC  G  + A++++ +M+++    + +T+  +I G+CK  + 
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A   F  +  KG+KPD+  +  ++S   ++
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/651 (24%), Positives = 276/651 (42%), Gaps = 82/651 (12%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  + L +  ++  D VK      P+   +N LL A+ K    D+V    K+M+  G   
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 221

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D YT   ++  +C   Q   ALS+  +++  G+  + V                      
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV---------------------- 259

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       T   L++GF +++RV  A+ L DKM + G+  D   Y+ II  LCK K
Sbjct: 260 ------------TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLL 275
           ++  A   + E++  GI P+    + L+    +    +    LL   I +    N +T  
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY- 366

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            ++++   V NG + +A  L + M++                 ++ P+  ++  +IN L 
Sbjct: 367 -SALLDAFVKNGKVLEAKELFEEMVRM----------------SIDPDIVTYSSLINGLC 409

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
              ++D A  +F  M   GC+ +V  YN LI+G C + R+E+  +L REM + G      
Sbjct: 410 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 469

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++ +   +  DV  A     +M   G  P +    +L+  LC +G+  +A     DM
Sbjct: 470 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +     DIV Y+  I G+    +V+ A  LF  +   G  PD+V Y  ++SGLC    +
Sbjct: 530 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 589

Query: 516 AEAEDLFNEMITKGLIPSVATYN-------------LLINGWC-------KSGNIDQAML 555
            E E L+ +M  +GL+ +  T +             +L  G+        KSG   +A+ 
Sbjct: 590 HEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL- 648

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               +L   SG         L        + DDA+ L+ EM +    P+ I F  L++ +
Sbjct: 649 ---SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 705

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            K ++    +     M+  G+  + + +  LI+ F      PLA  VL +M
Sbjct: 706 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 756



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 178/334 (53%), Gaps = 1/334 (0%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           T L+D KL+ A+ LF +M +     ++  +N L+  +    + +    L ++ME  G + 
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 221

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N +  C C    V  AL+++ KM   G+EP       L+   C+  +  +A   +
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV+ G+ PDIV Y+A I  L   KRV+ A + F++I   G  P+VV Y  +++GLC +
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R ++A  L ++MI K + P+V TY+ L++ + K+G + +A      M+ + S  PD++T
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVT 400

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++LI+GLC+  R D+A  +++ M  KGC  + +++  LI G CK  R    +  FR M 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++G+  +   +  LI  F    +   A E   +M
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 10   RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
            R+   + + + +V   CF        LI+       VEE   +F ++ + GL V N  +Y
Sbjct: 990  RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL-VGNTVTY 1048

Query: 70   NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
            N L++ L ++   D+ +   KEM   G   +  T   LL   C +G+ +KA+ VF E + 
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 1107

Query: 130  HGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
               ++   + ++I++    K G+V+   +L   +    ++ +   +  +I GF +K   +
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167

Query: 188  KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            +A  LF +M + G   ++  Y+ +I    ++   E + +L  EM+  G   D   +  L+
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LV 1226

Query: 248  TSCSDEGEL 256
            T+   +G L
Sbjct: 1227 TNMLHDGRL 1235


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 299/637 (46%), Gaps = 28/637 (4%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LI     VG VEE  ++LFD    E  C+PN  +Y+ ++  LC++  VD      + M +
Sbjct: 238 LINAYCRVGKVEEGKHVLFDM--EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMAN 295

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   D Y    L+  +C   +  +  S+ +E+   G   +HV ++ L+  F K  ++  
Sbjct: 296 KGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGG 355

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A ++ E M    I+LN  T+  LIHG  K   ++KA  LF +MT  G   D   Y+ +I 
Sbjct: 356 AFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE 415

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVN 270
           G  K + +E A +L  E+K   +T +  +   ++      G+LT    E++++     + 
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTR-ANELFQEMISWGLK 474

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              ++  +I++ LV  G  ++A  +L  M       D G+          SP+   ++ +
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVM------KDQGL----------SPDVFCYNTV 518

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K GK++   S   EM   G   NV+ Y   I G C +  ++ +     EM +SG 
Sbjct: 519 IIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P       +    C+  +   A    R M  QG  P V+ +++LI  L K+GK  EA  
Sbjct: 579 APNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
             ++++ +G +PD+  Y++ I  L     +  A EL  D+C  G  P++V YN +I+GLC
Sbjct: 639 VFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLC 698

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPD 569
           K   +A+A +LF+ +  KGL  +  TY+ +I G+CKS N+ +A      M  K  G  PD
Sbjct: 699 KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM--KLVGVPPD 756

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
              Y  LIDG C AG  + A+ L+  M E+G A     F ALI G  K  +   A     
Sbjct: 757 SFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVE 815

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M +  + P+   +  LI    +  N   A ++  EM
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 176/612 (28%), Positives = 288/612 (47%), Gaps = 25/612 (4%)

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           G  VP+ Y+Y  L+ A C+   V+  +  L +M++ G   +  T + ++   C +G  D+
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 120 ALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           AL +   + + G + D ++++ L+  F +     +   +++ M    ++ +   +  LI+
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GFVK+S +  A Q+ ++M       +   Y  +I GLCK   LE A  L+SEM   GI P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405

Query: 239 DFEILSKLITSCSD----EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D +  + LI         E    LL++   E+   N    +C +I+  L   G + +A  
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAY--MCGAIVNGLCHCGDLTRANE 463

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L Q MI                   + PN   +  I+  L+K+G+ + A+ +   M   G
Sbjct: 464 LFQEMI----------------SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +VF YN +I G C + ++EE    L EM   G KP  +T  +     CR  ++  A 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
               +M   G  P     T LI   CK G   +AF     M+ +G LPD+  +S  I GL
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               ++  A+ +F ++   G  PDV  Y  +IS LCK   +  A +L ++M  KG+ P++
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN LING CK G I +A      + EK   + + +TY+T+I G C +    +A  L++
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEK-GLARNSVTYSTIIAGYCKSANLTEAFQLFH 746

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M+  G  P+   + ALI G CK      AL  F  M E+G+      F ALI  F    
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLG 805

Query: 655 NPPLAFEVLKEM 666
               A++++++M
Sbjct: 806 KLIEAYQLVEDM 817



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 271/614 (44%), Gaps = 91/614 (14%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV------------------------F 138
           T + L  + CNSG F  A +V   +ID    + HV                        F
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERMIDT--RNPHVKILDSIIKCYKEINGSSSSSSVVVF 166

Query: 139 SILLVAFSKWGEVDKAC---------ELIERMDDCN------------------------ 165
            IL+  + K G +++A          E I  +  CN                        
Sbjct: 167 EILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLG 226

Query: 166 -IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  +  T+  LI+ + +  +V++   +   M + G   +   Y V+I GLC+   ++ A
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286

Query: 225 LQLYSEMKGSGITPDFEILSKLITSC-----SDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           L+L   M   G+ PD  I + LI        S EG+  L         ++ TM L  + +
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSML--------DEMYTMGLKPDHV 338

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM---IFKGTVSPNTSSFDIIINTLLK 336
               + NG + Q              +D+G    +   +F   +  NT ++  +I+ L K
Sbjct: 339 AYTALINGFVKQ--------------SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G L+ A  LF EMT +G   ++  YN LI+G      +E++YELL E+++       + 
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++   LC   D+  A  L ++M   G +P +   T ++K L K G+  EA + L  M 
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +G  PD+ CY+  I G     +++       ++ A G  P+V  Y   I G C+A  + 
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE  F EM+  G+ P+      LI+G+CK GN  +A      ML+ +   PDV T++ L
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD-QGVLPDVQTHSVL 623

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I GL   G+  +A+ +++E+ +KG  P+  T+ +LI+ LCK    +AA      M +KG+
Sbjct: 624 IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI 683

Query: 637 KPDMFVFVALISAF 650
            P++  + ALI+  
Sbjct: 684 NPNIVTYNALINGL 697



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/625 (23%), Positives = 263/625 (42%), Gaps = 26/625 (4%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N ++Y  L+  LCK   ++  E    EM   G   D  T   L++ Y      +KA  + 
Sbjct: 371 NTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELL 430

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            EI       + ++   ++      G++ +A EL + M    ++ N   +  ++ G VK+
Sbjct: 431 IEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKE 490

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R ++A+++   M   G + D   Y+ +I G CK  ++E       EM   G+ P+    
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
              I      GE+    +   E  D  +    ++C  ++     +G+  +A+   + M+ 
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610

Query: 302 GEPIADVGVEMLMIF--------------------KGTVSPNTSSFDIIINTLLKDGKLD 341
              + DV    ++I                     KG V P+  ++  +I+ L K+G L 
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV-PDVFTYTSLISNLCKEGDLK 669

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L  +M + G   N+  YN LI+GLC    + ++ EL   + E G      T +++ 
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTII 729

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C+  ++  A  L   M++ G  P       LI   CK G   +A      MV+EG +
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-I 788

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
                ++A I G   + ++  A +L  D+  +   P+ V Y I+I   C    + EAE L
Sbjct: 789 ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F EM  + ++P+V TY  L++G+ + G   +       M+ +    PD + ++ ++D   
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR-GIKPDDLAWSVMVDAHL 907

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G    A+ L ++M  +G    +  +  LI  LCK +     L     ++++G K  + 
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               L+  F        A  VL+ M
Sbjct: 968 TCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 263/593 (44%), Gaps = 22/593 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     V  +E+A  L  ++K+E L   N Y    ++  LC    +       +EM  +
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENL-TANAYMCGAIVNGLCHCGDLTRANELFQEMISW 471

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +    T +++     G+F++A+ +   + D G   D   ++ +++ F K G++++ 
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEG 531

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              +  M    ++ N  T+   IHG+ +   +  A + F +M  SG A +  +   +I G
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDG 591

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
            CK+     A   +  M   G+ PD +  S LI   S  G+L   +    E  D+ +   
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                S++  L   G +  A+ L   M K               KG ++PN  +++ +IN
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCK---------------KG-INPNIVTYNALIN 695

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++  A  LF  + + G  +N   Y+ +I G C S  L E+++L   M+  G  P
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             F   ++    C+  +   AL+L   M  +G       N L I    K GK +EA++ +
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNAL-IDGFFKLGKLIEAYQLV 814

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            DMV     P+ V Y+  I     +  +  A +LF ++      P+V+ Y  ++ G  + 
Sbjct: 815 EDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRI 874

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R +E   LF+EM+ +G+ P    ++++++   K GN  +A+  +  ML +       + 
Sbjct: 875 GRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL- 933

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
           YT LID LC      + + + +E+E++G   +  T   L+    +  R   AL
Sbjct: 934 YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 240/530 (45%), Gaps = 23/530 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++ L   G  EEA  +   +K +GL  P+ + YN ++   CK+  ++  +  L EM   
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLS-PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK 541

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV-AFSKWGEVDKA 154
           G   + YT    +  YC +G+   A   F E++D G     V    L+  + K G   KA
Sbjct: 542 GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
                 M D  +  + +T  VLIHG  K  ++ +A+ +F ++   G   D   Y  +I  
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNT 271
           LCK   L+ A +L+ +M   GI P+    + LI      GE+    +E+++   ++ +  
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAK-ARELFDGIPEKGLAR 720

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++  ++I+     + ++ +A+ L   M        VGV           P++  +  +I
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGM------KLVGV----------PPDSFVYCALI 764

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G  + ALSLF  M + G + +   +N LIDG     +L E+Y+L+ +M ++   
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P H T   +    C   ++  A  L  +M+ +   P V   T L+    + G+  E F  
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             +MV  G  PD + +S  +   +       AL+L  D+ + G       Y I+I  LCK
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCK 943

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
              ++E   + +E+  +G   S+AT   L+  + ++G  D+A+  L  M+
Sbjct: 944 HNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 181/443 (40%), Gaps = 57/443 (12%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G  I      G ++ A   F ++   G+  PN+     L++  CK  +      + + M 
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGI-APNDVICTDLIDGYCKDGNTTKAFAKFRCML 609

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
           D G   D  T + L+     +G+  +A+ VF+E++D G V D   ++ L+    K G++ 
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A EL + M    I  N  T+  LI+G  K   + KA +LFD + + G A ++  Y  II
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTII 729

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWE--- 265
            G CK+  L  A QL+  MK  G+ PD  +   LI  C   G     L+L +  + E   
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA 789

Query: 266 -----------------------------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
                                        D  +    +    ++    + G+I +A  L 
Sbjct: 790 STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849

Query: 297 QAMIKGEPIADV---------------GVEMLMIFKGTVS----PNTSSFDIIINTLLKD 337
             M K   + +V                 EM  +F   V+    P+  ++ ++++  LK+
Sbjct: 850 MEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKE 909

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G    AL L  +M   G      LY  LID LC  N L E  ++L E+E+ G K +  T 
Sbjct: 910 GNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATC 969

Query: 398 NSMFRCLCRRQDVVGALNLVRKM 420
            ++  C  R      AL ++  M
Sbjct: 970 GTLVCCFHRAGRTDEALRVLESM 992



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 2/190 (1%)

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +K +D  ++ +++I        VV + I+I    K   + EA  +F    T   I  +A 
Sbjct: 141 VKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLAC 200

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N L     K   ++        ML   +  PDV TYT LI+  C  G+ ++   +  +M
Sbjct: 201 CNSLSKDLLKGNRVELFWKVYKGMLG--AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDM 258

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           EEKGC PN +T+  +I GLC+      AL   R M  KG+ PD +++  LI  F  +   
Sbjct: 259 EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRS 318

Query: 657 PLAFEVLKEM 666
                +L EM
Sbjct: 319 TEGKSMLDEM 328


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 185/639 (28%), Positives = 298/639 (46%), Gaps = 36/639 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L++ +C+  +   ALS F +I   G   D   F+ LL        V +A  L  +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   Y+++IDG C  NRL+ +  +   M   G  P   T N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +   + L+ +M   G          LI      G    A   L +M+  
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV     + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S S
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+V+T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD      +++   S+     A  +L+++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 280/620 (45%), Gaps = 80/620 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G V  +E  ++   L+ +++R+ + C  + YS+N L
Sbjct: 66  LFSDMLRSRPL--PSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIRC--DIYSFNIL 120

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T T LL   C   +  +AL++F+++ +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V F+ L+    + G + +A  L++RM +  ++  + T+  ++ G  KK     AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 LFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           L  KM + S    +  +Y  II  LCK+ +   A  L++EM+  GI PD    + +I   
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 SDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+       
Sbjct: 301 CSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP------ 353

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + PNT ++  +I+   K  +LD A  +F  M   GC  N+  +N LID
Sbjct: 354 ---------RGII-PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C + R+++  ELL EM E+G      T N++        D+  AL+L+++M       
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 421 ---------------------------------------RVQGHEPWVKHNTLLIKELCK 441
                                                     G EP V+   +LI  L  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I+G CKA RV +  +LF EM  +G++ +  TY  LI G+ K GNI+ A+     M+
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643

Query: 562 EKESG-SPDVITYTTLIDGL 580
              SG  PD IT   ++ GL
Sbjct: 644 --SSGVYPDTITIRNMLTGL 661



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 230/528 (43%), Gaps = 40/528 (7%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R++    L   + ++ C  +      L+  L   G + EA  L D++  +GL  P   +Y
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITY 222

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL-TPLLQVYCNSGQFDKALSVFNEII 128
             +++ +CK          L++M++         + + ++   C  G+   A ++F E+ 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           + G + D   ++ ++V F   G    A +L++ M +  I  +  T+  LI+ FVK+ +  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A +L+D+M   G   +   Y  +I G CK  +L+ A  ++  M   G +P+    + LI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 248 TS-CS----DEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
              C     D+G EL   + E     D  T   L +    +    G ++ A +LLQ MI 
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV----GDLNAALDLLQEMIS 458

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-------- 353
                             + P+  + D +++ L  +GKL  AL +F+ M +         
Sbjct: 459 S----------------GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 354 ---GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +V  YN LI GL N  +  E+ EL  EM   G  P   T +SM   LC++  +
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  +   M  +   P V   T LI   CK G+  +      +M + G + + + Y   
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           I G   +  ++ AL++F+++ + G  PD +    +++GL   + +  A
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 189/430 (43%), Gaps = 68/430 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM +     D  T
Sbjct: 269 GRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVD---------------------EHVFSIL- 141
              L+  +   G+F +A  +++E++  G +                      EH+F ++ 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 142 -------LVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                  L+ F+           +D   EL+  M +  +  +  T+  LIHGF     ++
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-----------GI 236
            AL L  +M  SG   D    D ++ GLC N +L+ AL+++  M+ S           G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAY 293
            PD +  + LI+   +EG+  L  +E++E+   R +   T+  +S++  L     +D+A 
Sbjct: 508 EPDVQTYNILISGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +  +M                   + SPN  +F  +IN   K G++D  L LF EM + 
Sbjct: 567 QMFDSM----------------GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + N   Y  LI G      +  + ++ +EM  SG  P   T+ +M   L  ++++  A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 414 LNLVRKMRVQ 423
           + ++ K+++ 
Sbjct: 671 VAMLEKLQMS 680



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 1/194 (0%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P VV +  ++  + + +R      L+ +M  K +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++N+LI  +C    +  A+    + + K    PDV+T+TTL+ GLC+  R  +A+ L
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGK-ITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++     
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 653 ELNPPLAFEVLKEM 666
           + +   A  +L++M
Sbjct: 232 KGDTVSALNLLRKM 245


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 184/639 (28%), Positives = 299/639 (46%), Gaps = 36/639 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L++ +C+  +   ALS F +I   G   + V F+ LL        V +A +   +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   Y+++IDG C  NRL+ +  +   M   G  P   T N
Sbjct: 340 KFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFN 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C  + +   + L+ +M   G          LI      G    A   L +M+  
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIIS 507
           G  PDIV     + GL D  ++  ALE+F+       D+ A    +G  PDV  YNI+IS
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S S
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFS 578

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+V+T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  
Sbjct: 579 PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ M   G+ PD      +++   S+     A  +L+++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 278/620 (44%), Gaps = 80/620 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G V  +E  ++   L+ +++R+ + C  + YS+N L
Sbjct: 66  LFSDMLRSRPL--PSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIRC--DIYSFNIL 120

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T T LL   C   +  +AL  F+++ +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V F+ L+    + G + +A  L++RM +  ++  + T+  ++ G  KK     AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 LFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           L  KM + S    +  +Y  II  LCK+ +   A  L++EM+  GI PD    + +I   
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 SDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+       
Sbjct: 301 CSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP------ 353

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + PNT ++  +I+   K  +LD A  +F  M   GC  N+  +N LID
Sbjct: 354 ---------RGII-PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C + R+++  ELL EM E+G      T N++        D+  AL+L+++M       
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 421 ---------------------------------------RVQGHEPWVKHNTLLIKELCK 441
                                                     G EP V+   +LI  L  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I+G CKA RV +  +LF EM  +G++ +  TY  LI G+ K GNI+ A+     M+
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643

Query: 562 EKESG-SPDVITYTTLIDGL 580
              SG  PD IT   ++ GL
Sbjct: 644 --SSGVYPDTITIRNMLTGL 661



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 68/438 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD--------------------- 134
               D  T   L+  +   G+F +A  +++E++  G +                      
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379

Query: 135 EHVFSIL--------LVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           EH+F ++        L+ F+           +D   EL+  M +  +  +  T+  LIHG
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS----- 234
           F     ++ AL L  +M  SG   D    D ++ GLC N +L+ AL+++  M+ S     
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499

Query: 235 ------GITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVS 285
                 G+ PD +  + LI+   +EG+  L  +E++E+   R +   T+  +S++  L  
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKF-LEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +D+A  +  +M                   + SPN  +F  +IN   K G++D  L 
Sbjct: 559 QSRLDEATQMFDSM----------------GSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EM + G + N   Y  LI G      +  + ++ +EM  SG  P   T+ +M   L 
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662

Query: 406 RRQDVVGALNLVRKMRVQ 423
            ++++  A+ ++ K+++ 
Sbjct: 663 SKEELKRAVAMLEKLQMS 680



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 1/194 (0%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P VV +  ++  + + +R      L+ +M  K +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++N+LI  +C    +  A+    + + K    PDV+T+TTL+ GLC+  R  +A+  
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGK-ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++     
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 653 ELNPPLAFEVLKEM 666
           + +   A  +L++M
Sbjct: 232 KGDTVSALNLLRKM 245


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/558 (29%), Positives = 276/558 (49%), Gaps = 28/558 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+++F E++        + FS LL A +K  + D    L E+M +  I  N  T+ 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL +  KM K G+  +      ++ G C +K++  A+ L  +M  +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGS 288
           G  P+    + LI      +   E   L+  +       D+ T  ++ N     L   G 
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG----LCKRGD 236

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            D A+NLL  M +G+                + P    ++ II+ L K   +D AL+LF+
Sbjct: 237 TDLAFNLLNKMEQGK----------------LEPGVLIYNTIIDGLCKYKHMDDALNLFK 280

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G   NV  Y++LI  LCN  R  ++  LL +M E    P  FT +++     +  
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +V A  L  +M  +  +P +   + LI   C H +  EA +    MV +   PD+V Y+
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G    KRV+  +E+FR++   G   + V YNI+I GL +A     A+++F EM++ 
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P++ TYN L++G CK+G +++AM+     L++    P + TY  +I+G+C AG+ +D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L+  +  KG  P+ + +  +I+G C+      A   F+ MKE G  P+   +  LI 
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 649 AFLSELNPPLAFEVLKEM 666
           A L + +   + E++KEM
Sbjct: 580 ARLRDGDREASAELIKEM 597



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 270/584 (46%), Gaps = 32/584 (5%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN-YSYNCLLE 74
            L  ++VKSR F S      L+  +  +   +    L +Q++  G  +P+N Y+Y+ L+ 
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--IPHNHYTYSILIN 124

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             C+   + L    L +M   G+  +  TL+ LL  YC+S +  +A+++ +++   G+  
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             V F+ L+       +  +A  LI+RM     + +  T+ V+++G  K+   D A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           +KM +        +Y+ II GLCK K ++ AL L+ EM+  GI P+    S LI+   + 
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 254 G---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           G   + + L+ ++ E R +N      ++++   V  G + +A  L   M+K         
Sbjct: 305 GRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-------- 355

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                   ++ P+  ++  +IN      +LD A  +F  M    C  +V  YN LI G C
Sbjct: 356 --------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R+EE  E+ REM + G      T N + + L +  D   A  + ++M   G  P + 
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 431 HNTLLIKELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
               L+  LCK+GK   AM  F +L     E   P I  Y+  I G+    +V+   +LF
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
            ++   G  PDVVAYN +ISG C+     EA+ LF EM   G +P+   YN LI    + 
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           G+ + +   +  M  +  G     +   L+  +   GR D + +
Sbjct: 585 GDREASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFL 626



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R+   + + + +V   CF        LI+       VEE   +F ++ + GL V N  +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL-VGNTVTY 434

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L++ L ++   D+ +   KEM   G   +  T   LL   C +G+ +KA+ VF E + 
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 493

Query: 130 HGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
              ++   + ++I++    K G+V+   +L   +    ++ +   +  +I GF +K   +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A  LF +M + G   ++  Y+ +I    ++   E + +L  EM+  G   D   +  L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LV 612

Query: 248 TSCSDEGEL 256
           T+   +G L
Sbjct: 613 TNMLHDGRL 621


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 278/614 (45%), Gaps = 91/614 (14%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
           +++     + Y K ++  L     N  + D A+++F +++        V FS LL A +K
Sbjct: 39  VRDFSGVRYDYRKISINRL-----NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAK 93

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             + D    L E+M +  I  N  T+ +LI+ F ++S++  AL +  KM K G+  D   
Sbjct: 94  MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
            + ++ G C   ++  A+ L  +M   G  PD                            
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD---------------------------- 185

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                +   N+++  L  +    +A  L+  M+                KG   P+  ++
Sbjct: 186 -----SFTFNTLIHGLFRHNRASEAVALVDRMV---------------VKG-CQPDLVTY 224

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I++N L K G +DLALSL ++M Q      V +YN +ID LCN   + ++  L  EM+ 
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G +P   T NS+ RCLC       A  L+  M  +   P V   + LI    K GK +E
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +   +M++    PDI  YS+ I G     R+D A  +F  + +  C P+VV YN +I 
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404

Query: 508 GLCKAQRVAEAEDLFNEMITKGLI-----------------------------------P 532
           G CKA+RV E  +LF EM  +GL+                                   P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TY++L++G C +G ++ A++     L++    PD+ TY  +I+G+C AG+ +D   L
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +  +  KG  PN +T+  +++G C+      A   FR MKE+G  PD   +  LI A L 
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583

Query: 653 ELNPPLAFEVLKEM 666
           + +   + E+++EM
Sbjct: 584 DGDKAASAELIREM 597



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 265/544 (48%), Gaps = 22/544 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I  L  + L +  N+  D VK      P+   ++ LL A+ K    DLV    ++MQ+ G
Sbjct: 54  INRLNDLKLDDAVNLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
             ++ YT + L+  +C   Q   AL+V  +++  G+  + V  + LL  F     +  A 
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L+ +M +   + +  TF  LIHG  + +R  +A+ L D+M   G   D   Y +++ GL
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
           CK   +++AL L  +M+   I P   I + +I +  +   +   +    E  ++ +    
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  NS++R L + G    A  LL  MI+ +                ++PN  +F  +I+ 
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERK----------------INPNVVTFSALIDA 335

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            +K+GKL  A  L+ EM +     ++F Y++LI+G C  +RL+E+  +   M      P 
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++ +  C+ + V   + L R+M  +G        T LI    +  +   A     
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            MV +G LPDI+ YS  + GL +  +V+ AL +F  +      PD+  YNI+I G+CKA 
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +V +  DLF  +  KG+ P+V TY  +++G+C+ G  ++A   L R +++E   PD  TY
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD-ALFREMKEEGPLPDSGTY 574

Query: 574 TTLI 577
            TLI
Sbjct: 575 NTLI 578



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 246/537 (45%), Gaps = 22/537 (4%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+VKSR F S      L+  +  +   +    L +Q++  G+   N Y+Y+ L+   
Sbjct: 68  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSILINCF 126

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           C+   + L    L +M   G+  D  TL  LL  +C+  +   A+S+  ++++ G+  D 
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             F+ L+    +     +A  L++RM     + +  T+ ++++G  K+  +D AL L  K
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           M +        +Y+ II  LC  K +  AL L++EM   GI P+    + LI    + G 
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306

Query: 255 --ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             + + L+ ++ E R +N   +  ++++   V  G + +A  L   MIK           
Sbjct: 307 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---------- 355

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                 ++ P+  ++  +IN      +LD A  +F  M    C  NV  YN LI G C +
Sbjct: 356 ------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R++E  EL REM + G      T  ++     + ++   A  + ++M   G  P +   
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           ++L+  LC +GK   A      + +    PDI  Y+  I G+    +V+   +LF  +  
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            G  P+VV Y  ++SG C+     EA+ LF EM  +G +P   TYN LI    + G+
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/654 (28%), Positives = 311/654 (47%), Gaps = 34/654 (5%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGF---LIRCLGSVGLVEEANM--LFDQVKR---EGLC 62
           I   RVL      S  F++  + GF   LI C   +  + +ANM  LF +V     E   
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+ Y+Y  +++A CK   V   +M L EM+      + +T    +   C +G  D+AL 
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +++ G   D H +++L+  F K     +A  + E M    +  N  T+  LI GF+
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
           K+  +++AL++ D+M   G   +   Y+ +IGG+ K  ++  A+ L++EM  +GI PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 240 -FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + +L        D  +   L+ E+ + R +       + ++  L  +  + +A  +L  
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MI+                  V PN   +  +I   +++ + ++A+ L + M   G + +
Sbjct: 477 MIRN----------------GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +F YN LI GLC + ++EE+  LL +M E G KP   T  +      +  ++  A    +
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFK 580

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M   G  P     T+LIK  C  G  +EA      M+++G +PDI  YSA I  L    
Sbjct: 581 DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNG 640

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +   A+ +F      G  PDV  YN +ISG CK   + +A  L++EM+  G+ P++  YN
Sbjct: 641 KTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYN 700

Query: 539 LLIN--GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            LIN  G+CKSGN+ +A      M+ K   SPD   Y  LIDG    G  + A+ L++E 
Sbjct: 701 TLINDYGYCKSGNLTEAFKLFDEMISK-GISPDGYIYCILIDGCGKEGNLEKALSLFHEA 759

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           ++K    +   F +LI   CK  +   A   F  M +K + P++  +  LI A+
Sbjct: 760 QQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 812



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 179/717 (24%), Positives = 312/717 (43%), Gaps = 80/717 (11%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           +I P      +V+K+ C                VG V +  M+  ++++E  C PN ++Y
Sbjct: 237 KIVPDVYTYTNVIKAHC---------------KVGDVIKGKMVLSEMEKE--CKPNLFTY 279

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N  +  LC++ +VD      K M + G G D +T T L+  +C   +  +A  +F  +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G   +   ++ L+  F K G +++A  + + M    ++LN  T+  +I G  K   + K
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ LF++M  +G   D   Y+++I G  K+  +  A +L +EMK   +TP     S LI+
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 249 SCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                 +L     E+ +      V     +  ++++  V     + A  LL+ MI    +
Sbjct: 460 GLCHSSDLQK-ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 306 AD--------VGV---------EMLMIFKGT--VSPNTSSFDIIINTLLKDGKLDLALSL 346
            D        +G+         +ML++  G   + PN  ++   IN   K G++ +A   
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCN----------------------------------- 371
           F++M   G + N  +Y  LI G C+                                   
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVK 430
           + + +E+  +  +  ++G  P  F  NS+    C+  D+  A  L  +M   G  P  V 
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698

Query: 431 HNTLLIKE-LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
           +NTL+     CK G   EAF+   +M+ +G  PD   Y   I G      ++ AL LF +
Sbjct: 699 YNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 758

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
                    + A+N +I   CK  +V EA +LF++M+ K L P++ TY +LI+ + K+  
Sbjct: 759 -AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 817

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +++A      M E  +  P+ +TYT+L+      G     I L+ +ME +G A + I + 
Sbjct: 818 MEEAEQLFLDM-ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 876

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + +  CK  +   AL        +G+K +  VF ALI     E       E+L EM
Sbjct: 877 VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 260/571 (45%), Gaps = 44/571 (7%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMD----------DCNIRL-------NEKTFCVLIH 178
           H +SIL +     G + +A  ++E++           D  +R        N   F + I 
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            F     +++A  +F      GF       + ++  L K   + +  ++Y  M  + I P
Sbjct: 181 KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 239 DFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D    + +I +    G++    +++ E+ ++   N  T   N+ +  L   G++D+A  +
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTY--NAFIGGLCQTGAVDEALEV 298

Query: 296 LQAMIKGEPIADVGV---------------EMLMIFKGTVS----PNTSSFDIIINTLLK 336
            + M++     D                  E  +IF+   S    PN  ++  +I+  +K
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +G ++ AL +  EM   G   NV  YN +I G+  +  + ++  L  EM  +G +P  +T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT 418

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +     +  D+  A  L+ +M+ +   P     ++LI  LC      +A   L  M+
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P++  Y   I   +   R ++A+EL + + A+G  PD+  YN +I GLC+A++V 
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTT 575
           EA+ L  +M  KG+ P+  TY   IN + KSG I  A      ML   SG  P+ + YT 
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML--SSGIVPNNVIYTI 596

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI G C  G   +A+  +  M EKG  P+   + A+I  L K  + + A+  F    + G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + PD+F++ +LIS F  E +   A ++  EM
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 284/665 (42%), Gaps = 105/665 (15%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK-EMQDYGWGYDKYTLT 105
           +EA ++F+ +   GL  PN ++Y  L++   K  +++   +R+K EM   G   +  T  
Sbjct: 328 KEAKLIFESMPSSGLN-PNRFTYTALIDGFIKEGNIEEA-LRIKDEMITRGLKLNVVTYN 385

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            ++     +G+  KA+S+FNE++  G   D   +++L+  + K  ++ KACEL+  M   
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  +  T+ VLI G    S + KA ++ D+M ++G   +  MY  +I    +  + EMA
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 225 LQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           ++L   M  +G+ PD    + LI          E  +L+ ++ E + +        + + 
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE-KGIKPNAHTYGAFIN 564

Query: 282 ILVSNGSIDQAYNLLQAM---------------IKGEPIADVG--VEMLMIFKGTVS--- 321
           +   +G I  A    + M               IKG    DVG  VE L  FK  +    
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH--CDVGNTVEALSTFKCMLEKGL 622

Query: 322 -PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  ++  II++L K+GK   A+ +F +  + G + +VFLYN+LI G C    +E++ +
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 381 LLREMEESGFKPTHFTLNSMFR--CLCRRQDVVGALNLVRKMRVQG-------------- 424
           L  EM  +G  P     N++      C+  ++  A  L  +M  +G              
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 742

Query: 425 --------------HEPWVKH-------NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                         HE   K        N+L I   CKHGK +EA     DMV +   P+
Sbjct: 743 CGKEGNLEKALSLFHEAQQKSVGSLSAFNSL-IDSFCKHGKVIEARELFDDMVDKKLTPN 801

Query: 464 IVCYSAAIGG-------------LIDIKRVDL----------------------ALELFR 488
           IV Y+  I                +D++  ++                       + LF+
Sbjct: 802 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+ A G   D +AY ++ S  CK  +  EA  L N+ + +G+      ++ LI   CK  
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            I   +  LS M  KE  S    T  TL+ G   +G  D+A  +   M+  G  P  ++ 
Sbjct: 922 QISTVLELLSEM-GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 980

Query: 609 MALIT 613
              I+
Sbjct: 981 TDSIS 985



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 7/209 (3%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           ++   R L  D+V  +  ++P  + +  LI   G   ++EEA  LF  ++   + +PN  
Sbjct: 782 KVIEARELFDDMVDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI-IPNTL 838

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  LL +  +  +   +    K+M+  G   D      +   YC  G+  +AL + N+ 
Sbjct: 839 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 898

Query: 128 IDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G  +++ VF  L+    K  ++    EL+  M    + L+ KT   L+ GF K    
Sbjct: 899 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 958

Query: 187 DKALQLFDKMTKSGFASDA-AMYDVIIGG 214
           D+A ++   M + G+   + ++ D I  G
Sbjct: 959 DEASKVLGVMQRLGWVPTSLSLTDSISTG 987


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 181/619 (29%), Positives = 287/619 (46%), Gaps = 62/619 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL----TPL 107
           +F+QVK E        +Y C++E L      + +E  L EM+      D   L      +
Sbjct: 26  MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVYIGI 82

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++ Y   G+  +A++VF E +D    +  V  ++ ++    ++G   +A ++  RM D  
Sbjct: 83  MRDYGRKGKVQEAVNVF-ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMA 224
           I  +  T  + +  F    R   AL+L + M   G   +A  Y  +I G  K N Q+E A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-A 200

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             L+ EM   GI PD    +KLI                                  +L 
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLI---------------------------------HVLC 227

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G++ ++  L   ++K               +G V PN  +F+I I  L + G +D A 
Sbjct: 228 KKGNVQESEKLFSKVMK---------------RG-VCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L   +   G   +V  YN LI G C  ++L E+   L +M  SG +P  FT N++    
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  A  ++R    +G  P     + LI  LC  G    A     + +++GF   I
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y+  + GL     V  AL+L +D+  HGC PD+  YN++++GLCK   +++A  + N+
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
            I KG IP + T+N LI+G+CK  N+D+A+  L  ML     +PDVITY TL++GLC A 
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS-HGITPDVITYNTLLNGLCKAR 510

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + D+ +  +  M EKGC PN IT+  LI   CK  +   A+  F+ MK +G+ PD+    
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 645 ALISAFLSELNPPLAFEVL 663
            LI    S      A+E+ 
Sbjct: 571 TLICGLCSNGELDKAYELF 589



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 278/616 (45%), Gaps = 24/616 (3%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           M  G    ++R  G  G V+EA  +F+++     C P+  SYN ++  L +         
Sbjct: 74  MLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD-CEPSVQSYNAIMNILVEYGYFSQAHK 132

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
               M+D G   D YT T  ++ +C +G+   AL + N +   G     V +  ++  F 
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFY 192

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K     +A  L + M    I  +  TF  LIH   KK  V ++ +LF K+ K G   +  
Sbjct: 193 KENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKE 262
            +++ I GLC+   ++ A +L   +   G+TPD    + LI       +L      L K 
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +    + N  T   N+I+      G +  A  +L+  +               FKG + P
Sbjct: 313 VNSGVEPNEFTY--NTIINGFCKAGMMQNADKILRDAM---------------FKGFI-P 354

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  ++  +IN L  DG ++ A+++F E  + G   ++ LYN L+ GL     + ++ +L+
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           ++M E G  P  +T N +   LC+   +  A  ++     +G  P +     LI   CK 
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               +A   L  M+  G  PD++ Y+  + GL   +++D  ++ F+ +   GC P+++ Y
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY 534

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI+I   CK ++V+EA +LF EM T+GL P + T   LI G C +G +D+A      + +
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEK 594

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +   S     +  +I+  C       A  L+++M    CAP+  T+  +I   CK     
Sbjct: 595 EYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 623 AALVHFRMMKEKGMKP 638
            A         KG+ P
Sbjct: 655 LAHTFLLENISKGLVP 670



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 252/556 (45%), Gaps = 30/556 (5%)

Query: 120 ALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDK--ACE--LIERMDDCNIRLNEKTFC 174
           AL +FN++  + G+  +H          K G   K  A E  L E   + + ++ E  + 
Sbjct: 23  ALKMFNQVKTEDGF--KHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYI 80

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            ++  + +K +V +A+ +F++M           Y+ I+  L +      A ++Y  MK  
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 235 GITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           GI PD    +  + S    G     L LL     +  + N ++  C  I      N  I 
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY-CAVISGFYKENCQI- 198

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY+L   M+K                  + P+  +F+ +I+ L K G +  +  LF ++
Sbjct: 199 EAYHLFDEMLKQ----------------GICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   N+F +N  I GLC    ++E+  LL  +   G  P   + N++    C+   +
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           V A   + KM   G EP       +I   CK G    A + L D + +GF+PD   YS+ 
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL +   ++ A+ +F +    G    ++ YN ++ GL K   V +A  L  +M+  G 
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYNL++NG CK G +  A   L+  + K    PD+ T+ TLIDG C     D AI
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + + M   G  P+ IT+  L+ GLCK  +    +  F+ M EKG  P++  +  LI +F
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 651 LSELNPPLAFEVLKEM 666
             +     A E+ KEM
Sbjct: 542 CKDRKVSEAMELFKEM 557



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 237/523 (45%), Gaps = 29/523 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  LFD++ ++G+C P+  ++N L+  LCK  +V   E    ++   G   + +T    
Sbjct: 199 EAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +Q  C  G  D+A  +   I+  G   + + ++ L+  F K  ++ +A   + +M +  +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             NE T+  +I+GF K   +  A ++       GF  D   Y  +I GLC +  +  A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRDVNTMTLLCNSIM 280
           ++ E    G      + + L+   S +G   +   L+K++ E     D+ T  L+ N + 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           ++    G +  A  +L   I                KG + P+  +F+ +I+   K   +
Sbjct: 438 KM----GCLSDANGILNDAIA---------------KGCI-PDIFTFNTLIDGYCKQRNM 477

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A+ +   M   G   +V  YN L++GLC + +L+   +  + M E G  P   T N +
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-G 459
               C+ + V  A+ L ++M+ +G  P +     LI  LC +G+  +A+     + +E  
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F      ++  I    +   V +A +LF  +    C PD   Y ++I   CK   +  A 
Sbjct: 598 FSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
               E I+KGL+PS  T   ++N  C +  + +A++ ++ M++
Sbjct: 658 TFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+NY+Y  ++++ CK+ ++DL    L E    G      T   +L   C + +  +A+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692

Query: 122 SVFNEIIDHGWVDEHVFSIL 141
            + N ++ +G V E V SI 
Sbjct: 693 VIINLMVQNGIVPEEVNSIF 712


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 181/619 (29%), Positives = 287/619 (46%), Gaps = 62/619 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL----TPL 107
           +F+QVK E        +Y C++E L      + +E  L EM+      D   L      +
Sbjct: 26  MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVYIGI 82

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++ Y   G+  +A++VF E +D    +  V  ++ ++    ++G   +A ++  RM D  
Sbjct: 83  MRDYGRKGKVQEAVNVF-ERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMA 224
           I  +  T  + +  F    R   AL+L + M   G   +A  Y  +I G  K N Q+E A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-A 200

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             L+ EM   GI PD    +KLI                                  +L 
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLI---------------------------------HVLC 227

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G++ ++  L   ++K               +G V PN  +F+I I  L + G +D A 
Sbjct: 228 KKGNVQESEKLFSKVMK---------------RG-VCPNLFTFNIFIQGLCRKGAIDEAA 271

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L   +   G   +V  YN LI G C  ++L E+   L +M  SG +P  FT N++    
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  A  ++R    +G  P     + LI  LC  G    A     + +++GF   I
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y+  + GL     V  AL+L +D+  HGC PD+  YN++++GLCK   +++A  + N+
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
            I KG IP + T+N LI+G+CK  N+D+A+  L  ML     +PDVITY TL++GLC A 
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS-HGITPDVITYNTLLNGLCKAR 510

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + D+ +  +  M EKGC PN IT+  LI   CK  +   A+  F+ MK +G+ PD+    
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 645 ALISAFLSELNPPLAFEVL 663
            LI    S      A+E+ 
Sbjct: 571 TLICGLCSNGELDKAYELF 589



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 278/616 (45%), Gaps = 24/616 (3%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           M  G    ++R  G  G V+EA  +F+++     C P+  SYN ++  L +         
Sbjct: 74  MLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD-CEPSVQSYNAIMNILVEYGYFSQAHK 132

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
               M+D G   D YT T  ++ +C +G+   AL + N +   G     V +  ++  F 
Sbjct: 133 VYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFY 192

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K     +A  L + M    I  +  TF  LIH   KK  V ++ +LF K+ K G   +  
Sbjct: 193 KENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLF 252

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKE 262
            +++ I GLC+   ++ A +L   +   G+TPD    + LI       +L      L K 
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +    + N  T   N+I+      G +  A  +L+  +               FKG + P
Sbjct: 313 VNSGVEPNEFTY--NTIINGFCKAGMMQNADKILRDAM---------------FKGFI-P 354

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  ++  +IN L  DG ++ A+++F E  + G   ++ LYN L+ GL     + ++ +L+
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           ++M E G  P  +T N +   LC+   +  A  ++     +G  P +     LI   CK 
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               +A   L  M+  G  PD++ Y+  + GL   +++D  ++ F+ +   GC P+++ Y
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY 534

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI+I   CK ++V+EA +LF EM T+GL P + T   LI G C +G +D+A      + +
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEK 594

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +   S     +  +I+  C       A  L+++M    CAP+  T+  +I   CK     
Sbjct: 595 EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 623 AALVHFRMMKEKGMKP 638
            A         KG+ P
Sbjct: 655 LAHTFLLENISKGLVP 670



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 252/556 (45%), Gaps = 30/556 (5%)

Query: 120 ALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDK--ACE--LIERMDDCNIRLNEKTFC 174
           AL +FN++  + G+  +H          K G   K  A E  L E   + + ++ E  + 
Sbjct: 23  ALKMFNQVKTEDGF--KHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYI 80

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            ++  + +K +V +A+ +F++M           Y+ I+  L +      A ++Y  MK  
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 235 GITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           GI PD    +  + S    G     L LL     +  + N ++  C  I      N  I 
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY-CAVISGFYKENCQI- 198

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY+L   M+K                  + P+  +F+ +I+ L K G +  +  LF ++
Sbjct: 199 EAYHLFDEMLKQ----------------GICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   N+F +N  I GLC    ++E+  LL  +   G  P   + N++    C+   +
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           V A   + KM   G EP       +I   CK G    A + L D + +GF+PD   YS+ 
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL +   ++ A+ +F +    G    ++ YN ++ GL K   V +A  L  +M+  G 
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYNL++NG CK G +  A   L+  + K    PD+ T+ TLIDG C     D AI
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GCIPDIFTFNTLIDGYCKQRNMDKAI 481

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + + M   G  P+ IT+  L+ GLCK  +    +  F+ M EKG  P++  +  LI +F
Sbjct: 482 EILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541

Query: 651 LSELNPPLAFEVLKEM 666
             +     A E+ KEM
Sbjct: 542 CKDRKVSEAMELFKEM 557



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 236/523 (45%), Gaps = 29/523 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  LFD++ ++G+C P+  ++N L+  LCK  +V   E    ++   G   + +T    
Sbjct: 199 EAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +Q  C  G  D+A  +   I+  G   + + ++ L+  F K  ++ +A   + +M +  +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             NE T+  +I+GF K   +  A ++       GF  D   Y  +I GLC +  +  A+ 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRDVNTMTLLCNSIM 280
           ++ E    G      + + L+   S +G   +   L+K++ E     D+ T  L+ N + 
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           ++    G +  A  +L   I                KG + P+  +F+ +I+   K   +
Sbjct: 438 KM----GCLSDANGILNDAIA---------------KGCI-PDIFTFNTLIDGYCKQRNM 477

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A+ +   M   G   +V  YN L++GLC + +L+   +  + M E G  P   T N +
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-G 459
               C+ + V  A+ L ++M+ +G  P +     LI  LC +G+  +A+     + +E  
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK 597

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F      ++  I        V +A +LF  +    C PD   Y ++I   CK   +  A 
Sbjct: 598 FSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
               E I+KGL+PS  T   ++N  C +  + +A++ ++ M++
Sbjct: 658 TFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQ 700



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+NY+Y  ++++ CK+ ++DL    L E    G      T   +L   C + +  +A+
Sbjct: 633 CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692

Query: 122 SVFNEIIDHGWVDEHVFSIL 141
            + N ++ +G V E V SI 
Sbjct: 693 VIINLMVQNGIVPEEVNSIF 712


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 184/640 (28%), Positives = 303/640 (47%), Gaps = 38/640 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +  L+  + +    DLV    ++M+      D Y+
Sbjct: 59  GLEDAIDLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L++ +C+  +   ALS F +I   G   D   F+ LL        V +A +   +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +   R N  TF  L++G  ++ R+ +A+ L D+M + G       Y  I+ G+CK     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            AL L  +M+  S I P+  I S +I S   +G   +   L  E+ E + +       NS
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNS 295

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    S+G    A  LLQ M++ +                +SP+  +++ +IN  +K+G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERK----------------ISPDVVTYNALINAFVKEG 339

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A  L+ EM   G + N   YN++IDG C  +RL+ + ++   M   G  P  FT  
Sbjct: 340 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 399

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++    C  + +   + L+ +M  +G     V +NTL I   C  G    A      M+ 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL-IHGFCLVGDLNAALDLSQQMIS 458

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIII 506
            G  PDIV  +  + GL D  ++  ALE+F+       D+ A    +G  PDV+ YNI+I
Sbjct: 459 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 518

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S 
Sbjct: 519 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-SF 577

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SP+V+T+ TLI+G C AGR DD + L+ EM  +G   + I ++ LI G  K      AL 
Sbjct: 578 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 637

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F+ M   G+ PD      +++ F S+     A  +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 164/637 (25%), Positives = 281/637 (44%), Gaps = 80/637 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G V  +E  ++   L+ +++R+ + C  + YS+N L
Sbjct: 66  LFSDMLRSRPL--PSVVDF-CKLMGVVVRMERPDLVISLYQKMERKQIRC--DIYSFNIL 120

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T T LL   C   +  +AL  F+++ +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V F+ L+    + G + +A  L++RM +  ++  + T+  ++ G  KK     AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 192 LFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           L  KM + S    +  +Y  II  LCK+ +   A  L++EM+  GI PD    + +I   
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 251 SDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+       
Sbjct: 301 CSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP------ 353

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G + PNT +++ +I+   K  +LD A  +F  M   GC  +VF +  LID
Sbjct: 354 ---------RGII-PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C + R+++  ELL EM   G      T N++    C   D+  AL+L ++M       
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463

Query: 421 ---------------------------------------RVQGHEPWVKHNTLLIKELCK 441
                                                     G EP V    +LI  L  
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N +I+G CKA RV +  +LF EM  +G++     Y  LI G+ K GNI+ A+     M+
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 643

Query: 562 EKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
              SG  PD IT   ++ G       + A+ +  +++
Sbjct: 644 --SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 186/421 (44%), Gaps = 34/421 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G   +A  LF +++ +G+  P+ ++YN ++   C S      E  L+EM + 
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGI-FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D  T   L+  +   G+F +A  +++E++  G +   + ++ ++  F K   +D A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 379

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++   M       +  TF  LI G+    R+D  ++L  +M + G  ++   Y+ +I G
Sbjct: 380 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 439

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR---- 267
            C    L  AL L  +M  SG+ PD    + L+    D G+L     + K + + +    
Sbjct: 440 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499

Query: 268 ------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG---E 303
                  V    L  N ++  L++ G   +A  L +               +MI G   +
Sbjct: 500 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559

Query: 304 PIADVGVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
              D   +M + +   + SPN  +F+ +IN   K G++D  L LF EM + G + +  +Y
Sbjct: 560 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 619

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LI G      +  + ++ +EM  SG  P   T+ +M      ++++  A+ ++  +++
Sbjct: 620 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679

Query: 423 Q 423
            
Sbjct: 680 S 680



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 1/194 (0%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P VV +  ++  + + +R      L+ +M  K +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++N+LI  +C    +  A+    + + K    PDV+T+TTL+ GLC+  R  +A+  
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGK-ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++M E  C PN +TF  L+ GLC+  R   A+     M E G++P    +  ++     
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 653 ELNPPLAFEVLKEM 666
           + +   A  +L++M
Sbjct: 232 KGDTVSALNLLRKM 245


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 178/654 (27%), Positives = 293/654 (44%), Gaps = 26/654 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            +R RR        + + + RC         L+ CL   G+ E+A  +F ++   G   P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   +  ++  L K+  V        +M+  G+  D      ++     +G   +AL V 
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + ++    V   V + IL+ +  K G +++A EL   M     R N   +  LIHGF K 
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+ +A  LFD+M ++G+  D   + V+I GLCK+   E A + + EM   G  P+    
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 244 SKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + +I   S  G +     ++   I      +++T +C  ++      G +D+A  LL  +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC--LLDGFCKLGRLDEAAQLLDEL 461

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS-LFREMTQIGCMQN 358
            K                 + SPN   +  ++N L   G ++  L  LF +        +
Sbjct: 462 DKC----------------SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLD 505

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD--VVGALNL 416
             L  ++I GLC + RL+E+  + + M   G KP   T N +   LCR ++  V  A  L
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  +   G+ P     T L   LCK G+   A + L +    G+  D+V Y+A   GL  
Sbjct: 566 LHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             +VD A+ LF+++   G  PD  AY  II+GL K +++ +A   F+EMI KG  P+VAT
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVAT 685

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L+   C +GN+D+A      ML +      V+ Y  LI G C A + D A+ L+ +M
Sbjct: 686 YTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +G  P  +T  +L  GL +  +   A    + M   G  P    F A++   
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/621 (25%), Positives = 276/621 (44%), Gaps = 69/621 (11%)

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEV 151
           +  G+ +D +T   L+ +      + +  ++  E++  G   +   F+IL+ +F++    
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS-DAAMYDV 210
           D A    E M     + +  TF +L+    K    +KA ++F +M   GF   D A++  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++  L K K+++ A +++ +M+  G  PD    + +I   +  G     +K +  D  + 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL--DNMLA 288

Query: 271 TMTLLCNSIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              +       ILV++    G++++A  L + M      A  G            PN+  
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVM------AASGFR----------PNSVI 332

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K G++  A SLF EM + G   +V  +  +IDGLC S   E++ +   EM 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G KP   T  ++ + L +   V  A  +++ M   G  P       L+   CK G+  
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLID------------------------------ 476
           EA + L ++ +    P++  YS+ + GL D                              
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512

Query: 477 ------IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ--RVAEAEDLFNEMITK 528
                   R+D A  +F+ + + GC PD   YNI+I+GLC+++  RV  A  L +++   
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG---SPDVITYTTLIDGLCIAGR 585
           G +P   TY  L  G CK G +D+A+    +MLE+ S    + DV+ YT L  GLC  G+
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAV----KMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D A+ L+ EM  +G AP+   +  +I GL K  +   A   F  M  KG KP +  + A
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           L+ A     N   AF   + M
Sbjct: 689 LVQALCHAGNVDEAFHRFESM 709



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 254/576 (44%), Gaps = 33/576 (5%)

Query: 1   MASILSRARRIAPLR-VLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVK 57
           M   L +A+R+   R V  Q     +C   P A+ +  +I  L   G  +EA  + D + 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQ---MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            +  CVP   +Y  L+ +LCK+ +++  E   + M   G+  +    T L+  +  SG+ 
Sbjct: 288 AKA-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            +A S+F+E+++ G+  D    ++++    K G  ++A +  E M     + N  T+  +
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K  RV  A ++   M   G   D+  Y  ++ G CK  +L+ A QL  E+     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAY 293
           +P+ ++ S L+    D G +   + +++E       TL   LC SI+  L   G +D+A 
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 294 NLLQAMIKGEPIADVGVEMLMIF---------------------KGTVSPNTSSFDIIIN 332
            + Q M+      D     ++I                      K    P+  ++  +  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++D A+ +  E +  G   +V  Y  L  GLC   +++ +  L +EM   G  P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                  +   L + + +  A     +M  +G +P V   T L++ LC  G   EAF   
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 453 TDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             M+  G  +  ++ Y A I G     +VD AL+LF D+ + G  P  V    +  GL +
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + +  +A++L  EM   G  P  AT+  +++G  KS
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 167/389 (42%), Gaps = 86/389 (22%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           + PG    +I  L   G ++EA  +F ++  EG C P+  +YN L+  LC+S        
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG-CKPDATTYNILINGLCRS-------- 554

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
                                       + ++A ++ +++   G++ + V ++ L +   
Sbjct: 555 -------------------------RENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLC 589

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K GEVD+A +++E         +   +  L  G   + +VD+A+ LF +M + G A DAA
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y  II GL K K+LE A + + EM G G  P     + L+ +                 
Sbjct: 650 AYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA----------------- 692

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTS 325
                   LC++        G++D+A++  ++M+ +GE +  V +               
Sbjct: 693 --------LCHA--------GNVDEAFHRFESMLARGELVGSVMI--------------- 721

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            +D +I+   K  K+D AL LF +M   G +       +L DGL  S + E++ ELL+EM
Sbjct: 722 -YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              G  P   T  ++   L R+ D  G L
Sbjct: 781 AAGGSPPHAATFTAILDGL-RKSDESGKL 808



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 121/298 (40%), Gaps = 56/298 (18%)

Query: 406 RRQDVVGAL-NLVRKMRVQGHEPWVKHN-----------------TLLIKELCKHGKAME 447
           RR D+V ++   ++ +R+ G   W  HN                   +++ L   G A+ 
Sbjct: 46  RRADLVTSIVETIKDVRLDG-SSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAIS 104

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            FR+  +  Q GF  D+  Y+  +  L+  K       +  ++   G  P+  ++NI+I 
Sbjct: 105 FFRWAGE--QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------- 560
              + +R  +A   F  M  K   P + T+ +L++  CK+G  ++A      M       
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222

Query: 561 ----------------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
                                       +EK    PD I Y T+IDGL  AG   +A+ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + M  K C P  +T+  L+  LCK      A   FR+M   G +P+  ++ +LI  F
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 41/257 (15%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE A  L   +++ G  +P+  +Y  L   LCK   VD     L+E    GW  D    T
Sbjct: 559 VERAFALLHDLEKVGY-LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG--------------------------WVDEHV-- 137
            L    C  GQ D+A+S+F E++  G                          + DE +  
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGK 677

Query: 138 --------FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDK 188
                   ++ L+ A    G VD+A    E M     +  +   +  LIHGF K  +VD 
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDA 737

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL+LF+ M   G    A     +  GL ++ + E A +L  EM   G  P     + ++ 
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797

Query: 249 SC--SDE-GELTLLVKE 262
               SDE G+L  LV+E
Sbjct: 798 GLRKSDESGKLLKLVQE 814


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 301/604 (49%), Gaps = 29/604 (4%)

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           LL  LCK+  +D   + L EM       D    T ++   C   + D+A SV    +  G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              ++V +++ +    K   VD A +L+++MD+        T+  L+ G +K  R+D+A+
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            + ++M + G +     Y V+I GL K  ++E A +++ +M G+G  PD  + + LI+  
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 251 SDEGELT---LLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQA------------ 292
           +  G+L    + + ++ E+   R V    ++ N ++R L ++G+++ A            
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLD 251

Query: 293 -----YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                +N L+ A+ K E   +    +  + +    P   ++  +++  LK G+LD AL  
Sbjct: 252 LTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQ 311

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            +E  + G + +   Y ++IDGLC   R+EE  E   EM   G++P   T  ++     +
Sbjct: 312 LKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 371

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            + +  A  + R+M   G         +++  LCK G+  EA+     M + G +  +V 
Sbjct: 372 AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVT 431

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YSA + G      V  A+ELFR +   GC P++V+YNIII GLC+A ++A+A   F +++
Sbjct: 432 YSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL 491

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            + L P V T+N  ++G C+  +     + L   +  +  SP++ +Y+ L+DG+C AG  
Sbjct: 492 QRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGL 551

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           +  + +++EM  +G AP+ + F  LI  LC   R   AL  FR + E+   PD + + +L
Sbjct: 552 EVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSL 610

Query: 647 ISAF 650
           + A 
Sbjct: 611 LDAL 614



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 266/536 (49%), Gaps = 29/536 (5%)

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +ID   VD  V + LL    K G++D+A  L++ M  C+  +    F V+I+G  ++ R+
Sbjct: 1   MIDRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEM-PCSPDM--VAFTVVINGLCREKRL 57

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D+A  + ++  ++G   D   Y+V I GLCK ++++ A QL  +M      P     + L
Sbjct: 58  DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117

Query: 247 ITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           +      G L     +++++ E  +  T+      ++  L   G +++A  +        
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY-TVVIDGLSKAGRVEEARRIF------- 169

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ----NV 359
                 V+ML        P+   +  +I+ L K GKLD AL    +M + GC +    +V
Sbjct: 170 ------VDML---GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDV 220

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            ++N +I  LC S  LE++     E+++S    THFT N +   LC+ +    A+  V+K
Sbjct: 221 VIHNLVIRQLCASGNLEDALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKK 279

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +   P +   T L+    K G+  EA   L + V+ GF+PD V Y++ I GL  + R
Sbjct: 280 MSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR 339

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V+   E F ++   G  PD V Y  +I G  KA+ + +A  ++ +M+  G + S  TYN+
Sbjct: 340 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 399

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +++G CK+G + +A      M E+      V+TY+ L+DG C  G    A+ L+  M ++
Sbjct: 400 ILDGLCKAGRVAEAYATFLAM-EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           GC PN +++  +I GLC+  +   A  +F  + ++ + PD++ F + +      L+
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLD 514



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 291/590 (49%), Gaps = 39/590 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  + ++  R G C P+  +YN  ++ LCK+  VD     LK+M +        T T
Sbjct: 57  LDEAFSVLERAVRAG-CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYT 115

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+     +G+ D+A+++  ++++ G       +++++   SK G V++A  +   M   
Sbjct: 116 ALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGN 175

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA----SDAAMYDVIIGGLCKNKQ 220
             R +   +  LI G  K  ++D+AL   ++M ++G A     D  +++++I  LC +  
Sbjct: 176 GCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGN 235

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDR---DVNTMTLL 275
           LE AL  + E+  S     F     +   C  E   E    VK++ E R    + T T L
Sbjct: 236 LEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG----------------- 318
            +  +++    G +D+A   L+  ++   I D  V    I  G                 
Sbjct: 296 VDGFLKL----GRLDEALLQLKEAVERGFIPD-AVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 319 ---TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  ++  +I+  +K   +  A  ++R+M Q G + +   YN ++DGLC + R+
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+Y     MEE G   T  T +++    C   +V  A+ L R+M  +G EP +    ++
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID-IKRVDLALELFRDICAHG 494
           I+ LC+ GK  +A+ +   ++Q    PD+  +++ + GL   +  V   +ELF  + + G
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P++ +Y+I++ G+C+A  +    ++F+EM+++G+ P V  +N LI   C +G +D+A 
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA- 589

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           L + R LE+ S +PD  +Y +L+D L    R ++A +L   M+ +GCAP 
Sbjct: 590 LEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPR 638



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 185/425 (43%), Gaps = 61/425 (14%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +IR L + G +E+A   FD++  + L +  ++++N L+ ALCK+   +     +K+M +
Sbjct: 225 LVIRQLCASGNLEDALAYFDELD-DSLDL-THFTFNPLVAALCKAERTEEAIAFVKKMSE 282

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                  +T T L+  +   G+ D+AL    E ++ G++ + V ++ ++    K G V++
Sbjct: 283 RRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            CE    M +     +  T+  LI GF+K   + KA +++ +M +SG       Y++I+ 
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNT 271
           GLCK  ++  A   +  M+  G        S L+     EG ++  V+      DR    
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV-------------------GVEM 312
             +  N I+R L   G + +AY   + +++     DV                   GVE+
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVEL 522

Query: 313 L--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI---- 366
              M+ +GT SPN  S+ I+++ + + G L++ L +F EM   G   +V ++N LI    
Sbjct: 523 FESMVSQGT-SPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581

Query: 367 ------------------------------DGLCNSNRLEESYELLREMEESGFKPTHFT 396
                                         D L    R+EE+  L   M+  G  P H+ 
Sbjct: 582 IAGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRHYD 641

Query: 397 LNSMF 401
           L   F
Sbjct: 642 LTVRF 646



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           T L++GLC  G+ D A++L +EM    C+P+ + F  +I GLC+  R   A         
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G +PD   +   I           AF++LK+M
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 183/673 (27%), Positives = 300/673 (44%), Gaps = 62/673 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + ++  +A   A L++L   + +     S      +I+ LG+ G  +    L  +++REG
Sbjct: 60  LTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREG 119

Query: 61  LCVPNNYSYNCLLEALCKSCSV-----DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSG 115
                + +   ++ +  +S +      D V++   ++  +G   D      LL V     
Sbjct: 120 -----HEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS 174

Query: 116 QFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +     SV+NE+ D G   D    + L+ A  +  +V  A  ++E M    +  +E TF 
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+ GF+++  ++ AL++  KM ++G +      +V+I G CK  ++E AL    +    
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD                                  +  N+ +  L  NG +  A  
Sbjct: 295 GFEPD---------------------------------QVTYNTFVHCLCQNGHVSHALK 321

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++                LM+ +G   P+  +++ +IN L K+G+LD A  +  +M   G
Sbjct: 322 VMD---------------LMLQEGH-DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C+ +   +N LI  LC+ NRLEE+ +L RE+   G  P  +T N +   LC+  D    +
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L  +M+  G  P      +LI  LC  GK + A   L +M   G     V Y+  I  L
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R++ A E+F  + AHG     V +N +I GLCKA+R+ +A +L  +M+ +GL PS 
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN ++  +CK G++ +A   L  M        DV+TY TLI+GLC AGR   A+ L  
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETM-TANGFEIDVVTYGTLINGLCKAGRTQVALKLLR 604

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M  KG  P    +  +I  L + +  R AL  FR M E G  PD   +  +        
Sbjct: 605 GMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664

Query: 655 NP-PLAFEVLKEM 666
            P   AF+ L EM
Sbjct: 665 GPIKEAFDFLVEM 677



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 245/556 (44%), Gaps = 64/556 (11%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN LL  L +   + L+E    EM D G   D  TL  L++  C + Q   A+ +  E+ 
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 129 DHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
            H    DE  F+ L+  F + G ++ A  +  +M +        T  VLI+G+ K  RV+
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            AL    K    GF  D   Y+  +  LC+N  +  AL++   M   G  PD    + +I
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342

Query: 248 TSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL--------- 295
              S  GEL     +V ++  DR     T   N+++  L S   +++A +L         
Sbjct: 343 NCLSKNGELDEAKGIVNQMV-DRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401

Query: 296 ----------LQAMIK-GEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLA 343
                     + A+ K G+P   +G+ +    K +  +P+  +++I+I+ L   GKL  A
Sbjct: 402 SPDVYTFNILINALCKVGDP--HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459

Query: 344 LSLFREMTQIGCMQNVFLYNN-----------------------------------LIDG 368
           L L +EM   GC ++   YN                                    LIDG
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC + R++++ EL+ +M + G +P++ T NS+    C++ D+  A +++  M   G E  
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V     LI  LCK G+   A + L  M  +G  P    Y+  I  L     +  AL LFR
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQ-RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           ++   G  PD + Y I+  GLC+    + EA D   EM+ KG +P  +++ +L  G    
Sbjct: 640 EMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699

Query: 548 GNIDQAMLCLSRMLEK 563
           G  D  +  +  ++EK
Sbjct: 700 GMDDYLISAIELIIEK 715



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 208/440 (47%), Gaps = 25/440 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C P   + N L+   CK   V D +    KE+ D G+  D+ T    +   C +G    A
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHA 319

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + ++  G   D   ++ ++   SK GE+D+A  ++ +M D     +  TF  LI  
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVA 379

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              ++R+++AL L  ++T  G + D   ++++I  LCK     + ++L+ EMK SG  PD
Sbjct: 380 LCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPD 439

Query: 240 FEILSKLITSCSDEGELTL---LVKEIWED---RDVNTMTLLCNSI---MRILVSNGSID 290
               + LI      G+L     L+KE+  +   R   T   + +++   MRI  +    D
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499

Query: 291 Q-----------AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           Q            +N L+  + K + I D    +  + K  + P+  +++ I+    K G
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A  +   MT  G   +V  Y  LI+GLC + R + + +LLR M   G +PT    N
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM-EAFRFLTDMVQ 457
            + + L RR ++  AL+L R+M   G  P      ++ + LC+ G  + EAF FL +MV 
Sbjct: 620 PVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVN 679

Query: 458 EGFLPDIVCYSAAIGGLIDI 477
           +GF+P+   +     GL+++
Sbjct: 680 KGFMPEFSSFRMLAEGLLNL 699



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  +FDQ+   G+   +  ++N L++ LCK+  +D     +++M   G      T  
Sbjct: 491 IEEAEEVFDQMDAHGIS-RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYN 549

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            +L  YC  G   KA  +   +  +G+ +D   +  L+    K G    A +L+  M   
Sbjct: 550 SILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 609

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEM 223
            IR   K +  +I    +++ +  AL LF +MT+ G   DA  Y ++  GLC+    ++ 
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKE 669

Query: 224 ALQLYSEMKGSGITPDF 240
           A     EM   G  P+F
Sbjct: 670 AFDFLVEMVNKGFMPEF 686


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 298/611 (48%), Gaps = 32/611 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           + +++ R+ +  P ++    +++A      +  V   L E+   G+G+  Y+   LL   
Sbjct: 114 MLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQL 173

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
                 + A +++ ++++ G     + F+ L+   SK G+V +A  ++ ++   ++  + 
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  LI G  +   +D A  +FD+M K G   ++  Y  +I GLC   +++ AL +  E
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293

Query: 231 MKGSGITPDFEILSKLITSC------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           M   GI P     +  IT+        +  EL   +K+     +V T T L + + R+  
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL-- 351

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G ++ A  L   M+K               +G V PNT +++ +IN L   G+   AL
Sbjct: 352 --GKLEVAIGLYHKMLK---------------EGLV-PNTVTYNALINELCVGGRFSTAL 393

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F  M   G + N   YN +I GLC    +E++  L  +M + G  PT  T N++    
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 405 CRRQDVVGALNLVRKMRVQGHEP--WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             + +V  A  L+  M+  G EP  W  +   L+    K GK   A  +  +MV+ G  P
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNE--LVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V Y+A I G     +VD+AL L + +   GC P+V +YN +I+GL K  R +EAE + 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           ++M+ +GL+P+V TY  LI+G C++G    A      M EK    P++ TY++LI GLC 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQ 630

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ D+A +L  EME KG AP+ +TF +LI G     R   A +  R M + G KP+   
Sbjct: 631 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRT 690

Query: 643 FVALISAFLSE 653
           +  L+     E
Sbjct: 691 YSVLLKGLQKE 701



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 255/546 (46%), Gaps = 25/546 (4%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L    +VE A  L+ Q+   G+  P+  ++N L+  L K   V   E+ L ++  Y    
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGI-QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D +T T L+  +C +   D A  VF+ ++  G     V +S L+      G VD+A +++
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E M +  I     T+ + I         ++A++L  +M K G   +   Y  +I GL + 
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI-WEDRD---VNTMTL 274
            +LE+A+ LY +M   G+ P+    + LI      G  +  +K   W +      NT T 
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N I++ L   G I++A  L + M+K  P+                P   +++ +IN  
Sbjct: 412 --NEIIKGLCLGGDIEKAMVLFEKMLKMGPL----------------PTVVTYNTLINGY 453

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           L  G ++ A  L   M + GC  + + YN L+ G     +LE +    +EM E G  P  
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            +  ++     +   V  AL+L+++M   G  P V+    +I  L K  +  EA +    
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV++G LP+++ Y+  I GL    R   A ++F D+    C P++  Y+ +I GLC+  +
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EAE L  EM  KGL P   T+  LI+G+   G ID A L L RM++     P+  TY+
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM-GCKPNYRTYS 692

Query: 575 TLIDGL 580
            L+ GL
Sbjct: 693 VLLKGL 698



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 260/575 (45%), Gaps = 56/575 (9%)

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N  +  +     NEI   G+    +  + LL+  +K+  V+ A  L ++M +  I+ +  
Sbjct: 140 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 199

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  LI+   KK +V +A  +  ++ +   + D   Y  +I G C+N+ L++A  ++  M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  P+    S LI                           LCN         G +D+
Sbjct: 260 VKEGCDPNSVTYSTLING-------------------------LCNE--------GRVDE 286

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSFDIIIN 332
           A ++L+ MI+      V    L I                    K    PN  ++  +I+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L + GKL++A+ L+ +M + G + N   YN LI+ LC   R   + ++   ME  G   
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKAMEAFRF 451
              T N + + LC   D+  A+ L  KM   G  P V  +NTL+   L K G    A R 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK-GNVNNAARL 465

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  M + G  PD   Y+  + G     +++ A   F+++   G  P+ V+Y  +I G  K
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +V  A  L   M   G  P+V +YN +ING  K     +A     +M+E +   P+VI
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE-QGLLPNVI 584

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TYTTLIDGLC  GR   A  ++++ME++ C PN  T+ +LI GLC+  +   A +  + M
Sbjct: 585 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 644

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + KG+ PD   F +LI  F+       AF +L+ M
Sbjct: 645 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 246/509 (48%), Gaps = 27/509 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L F  LI  L   G V EA ++  Q+ +  L  P+ ++Y  L+   C++ ++DL 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLA 252

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
                 M   G   +  T + L+   CN G+ D+AL +  E+I+ G     + +++ + A
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                  ++A EL+ RM     R N +T+  LI G  +  +++ A+ L+ KM K G   +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVK 261
              Y+ +I  LC   +   AL+++  M+G G   + +  +++I      G++    +L +
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG--EPIADVGVEMLMIFKG- 318
           ++ +   + T+    N+++   ++ G+++ A  LL  M +   EP      E++  F   
Sbjct: 433 KMLKMGPLPTVVTY-NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491

Query: 319 ----------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++PN  S+  +I+   KDGK+D+ALSL + M ++GC  NV  Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I+GL   NR  E+ ++  +M E G  P   T  ++   LCR      A  +   M  
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P +   + LI  LC+ GKA EA   L +M ++G  PD V +++ I G + + R+D 
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 671

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCK 511
           A  L R +   GC P+   Y++++ GL K
Sbjct: 672 AFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 172/593 (29%), Positives = 276/593 (46%), Gaps = 69/593 (11%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N LL  L  +   D      KE+    +  + +T   L++ +C  GQ  +A+SVF+++  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G + +    + LL+   + G++  A +L   M          +  +L+ GF    RV  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLC-KNK---QLEMALQLYSEMKGSGITPDFEILS 244
           AL     M KS  +     Y++++ GLC +NK   +LE A++ + EMK SG+ PD E   
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 245 KLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            L+++ SD G   E   L   +    D+ T  +L +   +I    G   +A +L++ ++K
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKI----GQTYEAQSLMKEILK 236

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G E          PN  ++ IIIN   K  K++ A  +F +M +  C+ N   
Sbjct: 237 ------AGYE----------PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LI G C +  LE++ +L  EME+ G K T  T N++   LC+               
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK--------------- 325

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                              K G    A      +   G  P IV Y++ I G  D +R+ 
Sbjct: 326 -------------------KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLS 366

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A++ F ++    C P+V+ Y+I+I GLCK +R+ EA     +M   G  P+V TY  LI
Sbjct: 367 EAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLI 425

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           NG+CK G +  A+L   +M  K +G +P+ + + TLIDGLC A R +D + L   M  +G
Sbjct: 426 NGFCKCGELKSALLFFEKM--KLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           C P+ IT+  LI+GLC  +R   A    R+       P++  F  LI    ++
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQ---RLFDGMACAPNVTTFNFLIRGLCAQ 533



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 230/536 (42%), Gaps = 64/536 (11%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF +V   GL  PN ++YN L+   CK   +        +M+  G   +  T+  
Sbjct: 14  DQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 72

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           LL   C  GQ   AL +F E+    ++      +ILL  F   G V  A   ++ M   +
Sbjct: 73  LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSS 132

Query: 166 IRLNEKTFCVLIHGFV----KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
             +   T+ +++ G        +R+++A++ F +M  SG   D   Y +++  L  + ++
Sbjct: 133 SSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRM 192

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
             A  L+S M  S     + +L           E   L+KEI +   + +V T +++ N 
Sbjct: 193 AEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 252

Query: 279 -------------IMRILVSN------------------GSIDQA--------------- 292
                         M+++ SN                  G ++ A               
Sbjct: 253 YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKAT 312

Query: 293 ---YN-LLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLF 347
              YN L+ ++ K        V++    +G  ++P   +++ +I       +L  A+  F
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF 372

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM +  C  NV  Y+ LIDGLC   R++E+ + L +M+  G+ PT  T   +    C+ 
Sbjct: 373 DEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKC 431

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            ++  AL    KM++ G  P       LI  LCK  +A +  R L  M  EG  PD++ Y
Sbjct: 432 GELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITY 491

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  I GL    RV+ A  LF  +    C P+V  +N +I GLC  ++V EA ++ +
Sbjct: 492 NCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 12/266 (4%)

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R+ D   AL L +++      P      +LI+  CK G+  +A    +DM   G LP+  
Sbjct: 11  RKHDQ--ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAS 68

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  + GL +I ++  AL+LFR++ A    P   ++NI++ G   A RV +A     +M
Sbjct: 69  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128

Query: 526 ITKGLIPSVATYNLLINGWC---KSGN-IDQAMLCLSRMLEKESG-SPDVITYTTLIDGL 580
                  +  TYNL++ G C   KS N ++QAM     M  K SG  PD+ +Y  L+  L
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM--KASGVEPDLESYHILLSAL 186

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             +GR  +A  L++ M    C+P+ +T+  L+ G CK  +   A    + + + G +P++
Sbjct: 187 SDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 243

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
           F +  +I+ +        A+EV  +M
Sbjct: 244 FTYSIIINCYCKLDKVEEAWEVFMKM 269


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 177/615 (28%), Positives = 291/615 (47%), Gaps = 26/615 (4%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           + F SP  + +  L+  L   G  EEA +LF+++K      P+  SY+CL+ +L ++   
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELK-AAKWTPDVVSYSCLINSLGRAGKW 60

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
           +     + EMQ  G   + +T   L+     +GQFD+AL +  E+ D+G V D   ++ L
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +    K G + +A  L   M +     +  T+  LI+G  K  R  KA++L ++M + G 
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLL 259
             D   Y  +I GL K+ +   A +L+ EMK  G  PD    + L+ +    G +   L 
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------------I 300
           + +  ++R V    +  N+++      G + +AYNLL  M                   I
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K   + +    +  + K    P+T +++ +IN L K G L+ A  LF  M   GC  +V 
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ LI  L  + R+E +  L  EME  G +P  FT  S+   L +   V  A  L  +M
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G  P V      +  L + G+  EA +   DM + G LPD+  Y A + GL   K V
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D A  L +++   GC  D + ++  +  L     V EA +L     +KGL P  ++YN L
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+   K+G + +A   L   L+++ G PD+++Y++LI  L   G+ D A  L  EM ++G
Sbjct: 541 IDALAKAGRVSEAFNTLED-LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599

Query: 601 CAPNRITFMALITGL 615
              +  ++  L+  L
Sbjct: 600 LKLSPRSYSNLVRKL 614



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 179/615 (29%), Positives = 286/615 (46%), Gaps = 28/615 (4%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   PN  +YN LL AL K+   +  ++  +E++   W  D  + + L+     +G+++
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61

Query: 119 KALSVFNEIIDHG-----WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
            AL V  E+   G     W     ++ L+    K G+ D+A  L+  M D     + +T+
Sbjct: 62  AALEVVAEMQAKGCKPNLWT----YNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTY 117

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI    K  R+ +A  LF +M + G   D   Y+ +I GL K  + + A++L  EM+ 
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G  PD    S LIT    +GE     K   E   R     ++   ++M  L   G +D 
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M +               +G V P   +++ +I    K G L  A +L  EM 
Sbjct: 238 ALELLDEMKE---------------RG-VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + GC  +V  Y+ LI GL  +++L+E+ ++L++ME+ G  P   T N++   L +   + 
Sbjct: 282 RNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLN 341

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L  +M+ +G  P V   + LI  L K  +   A     +M   G  PD+  Y + I
Sbjct: 342 DAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSII 401

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L    +VD A  LF ++   G  PDV+ YN  ++ L +  R  EA  +F +M   GL+
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P VATY+ L+ G  K+  +D A   L  ++E +  + D + +   ++ L   G  D+A  
Sbjct: 462 PDVATYDALLLGLSKTKEVDDACGLLKELIE-QGCAFDSLKFDECLEILTSWGNVDEAHE 520

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L      KG  P   ++ ALI  L K  R   A      +KE+G KPD+  + +LISA  
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580

Query: 652 SELNPPLAFEVLKEM 666
                  AFE+L+EM
Sbjct: 581 QTGQIDTAFELLEEM 595



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 219/496 (44%), Gaps = 23/496 (4%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L +A R++    L  ++ +  C         LI  LG VG  ++A  L ++++R G C
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG-C 180

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +Y+ L+  L K           +EM+  G   D  T T L+     +G+ D AL 
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +E+ + G     V ++ L+  F K G++ +A  L++ M     + +  T+  LI G +
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K S++D+A Q+  KM K G   D   Y+ +I GL K   L  A +L+  MK  G  PD  
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360

Query: 242 ILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             S LIT+       E   ++ E  E   +        SI+ +L   G +D A  L   M
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420

Query: 300 IKGEPIADVGV---------------EMLMIFK----GTVSPNTSSFDIIINTLLKDGKL 340
                  DV                 E   IF+      + P+ +++D ++  L K  ++
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  L +E+ + GC  +   ++  ++ L +   ++E++ELL+     G  P   + N++
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L +   V  A N +  ++ QG +P +   + LI  L + G+   AF  L +M + G 
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600

Query: 461 LPDIVCYSAAIGGLID 476
                 YS  +  L D
Sbjct: 601 KLSPRSYSNLVRKLQD 616



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 2/220 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  LG  G V++A+ LF +++ +GL  P+  +YN  L +L +           ++M++ 
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLS-PDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  T   LL     + + D A  +  E+I+ G   D   F   L   + WG VD+A
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL++  +   +     ++  LI    K  RV +A    + + + G   D   Y  +I  
Sbjct: 519 HELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISA 578

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           L +  Q++ A +L  EM   G+       S L+    D G
Sbjct: 579 LGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 273/558 (48%), Gaps = 28/558 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+++F E++        + FS LL A +K  + D    L E+M +  +  N  T+ 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL +  KM K G+  +      ++ G C +K++  A+ L  +M  +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGS 288
           G  P+    + LI      +   E   L+  +       D+ T  ++ N     L   G 
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG----LCKRGD 236

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            D A+ LL  M +G+                + P    +  II+ L K+  +D AL+LF+
Sbjct: 237 TDLAFILLNKMEQGK----------------LEPGVLIYTTIIDGLCKNKHMDDALNLFK 280

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G   NV  Y++LI  LCN  R  ++  LL +M E    P  FT +++     +  
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +V A  L  +M  +  +P +   + LI   C H +  EA +    MV +   PD+V YS
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYS 400

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G    KRVD  +ELFR++   G   + V Y  +I GL +A     A+++F EM++ 
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P++ TYN L++G CK+G +++AM+     L++    P + TY  +I+G+C AG+ +D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L+  +  KG  P+ + +  +I+G C+      A   F+ MKE G  P+   +  LI 
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 649 AFLSELNPPLAFEVLKEM 666
           A L + +   + E++KEM
Sbjct: 580 ARLRDGDREASAELIKEM 597



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 270/583 (46%), Gaps = 30/583 (5%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
            L  ++VKSR F S      L+  +  +   +    L +Q++  G+   N+Y+Y+ L+  
Sbjct: 67  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGM-PHNHYTYSILINC 125

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
            C+   + L    L +M   G+  +  TL+ LL  YC+S +  +A+++ +++   G+   
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 185

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            V F+ L+       +  +A  LI+RM     + +  T+ V+++G  K+   D A  L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           KM +        +Y  II GLCKNK ++ AL L+ EM+  GI P+    S LI+   + G
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305

Query: 255 ---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
              + + L+ ++ E R +N      ++++   V  G + +A  L   M+K          
Sbjct: 306 RWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR--------- 355

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                  ++ P+  ++  +IN      +LD A  +F  M    C  +V  Y+ LI G C 
Sbjct: 356 -------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCK 408

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + R++E  EL REM + G      T  ++ + L +  D   A  + ++M   G  P +  
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 432 NTLLIKELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
              L+  LCK+GK   AM  F +L     E   P I  Y+  I G+    +V+   +LF 
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++   G  PDVVAYN +ISG C+     EA+ LF EM   G +P+   YN LI    + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           + + +   +  M  +  G     +   L+  +   GR D + +
Sbjct: 586 DREASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFL 626



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R+   + + + +V   CF    +   LI+       V+E   LF ++ + GL V N  +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL-VGNTVTY 434

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
             L++ L ++   D+ +   KEM   G   +  T   LL   C +G+ +KA+ VF E + 
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 493

Query: 130 HGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
              ++   + ++I++    K G+V+   +L   +    ++ +   +  +I GF +K   +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A  LF +M + G   ++  Y+ +I    ++   E + +L  EM+  G   D   +  L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LV 612

Query: 248 TSCSDEGEL 256
           T+   +G L
Sbjct: 613 TNMLHDGRL 621


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 303/659 (45%), Gaps = 55/659 (8%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A LR+L   + +      P     +IR LG+VG ++   +L  +++REG  V     ++ 
Sbjct: 56  AALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSF 115

Query: 72  LLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           L     +    D V++ L ++Q  +G   D      LL V     +     SV++E+   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 131 GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G   + V F+ L+ A  +  +V  A  ++E M    +  +E TF  L+ GFV++  ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           L++  +M + G ++     +V+I G CK  ++E AL    +    G  PD          
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD---------- 285

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                                   +  N+ +  L  N  +  A  ++  M++        
Sbjct: 286 -----------------------QITYNTFVNGLCQNDHVGHALKVMDVMVQ-------- 314

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  +G   P+  +++I++N L K+G+L+ A  +  +M   GC+ ++  +N LI  L
Sbjct: 315 -------EGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-W 428
           C  NRLEE+ +L R++   G  P  +T N +   LC+  D   AL L  +M+  G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V +NT LI  LC  GK  +A   L DM   G     + Y+  I GL    R++ A E+F 
Sbjct: 427 VTYNT-LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   + + +N +I GLCK +++ +A +L N+MI++GL P+  TYN ++  +CK G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I +A   L  M        DV+TY TLI+GLC AGR   A+ +   M  KG  P    +
Sbjct: 546 DIKKAADILETM-TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP-PLAFEVLKEM 666
             ++  L + +  R AL  FR M E G  PD   +  +         P   AF+ + EM
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 257/556 (46%), Gaps = 56/556 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  ++N L++ALC++  V    + L+EM   G   D+ T T L+Q +   G  + AL V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +++ G     V  ++L+  + K G V+ A   I++        ++ T+   ++G  +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y++++  LCKN QLE A  + ++M   G  PD   
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIK 301
            + LI +                                 L +   +++A +L  Q  +K
Sbjct: 359 FNTLIAA---------------------------------LCTGNRLEEALDLARQVTVK 385

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G                 VSP+  +F+I+IN L K G   LAL LF EM   GC  +   
Sbjct: 386 G-----------------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LID LC+  +L ++ +LL++ME +G   +  T N++   LC++  +  A  +  +M 
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488

Query: 422 VQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +QG     +  NT LI  LCK  K  +AF  +  M+ EG  P+ + Y++ +        +
Sbjct: 489 LQGISRNAITFNT-LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++   + A+G   DVV Y  +I+GLCKA R   A  +   M  KG+ P+   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           +    +  NI  A L L R + +    PD +TY  +  GLC  G P  +A     EM +K
Sbjct: 608 LQSLFRRNNIRDA-LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 600 GCAPNRITFMALITGL 615
           G  P   +F  L  GL
Sbjct: 667 GFIPEFSSFRMLAEGL 682



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 232/506 (45%), Gaps = 55/506 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C     + N L+   CK   V D +    +E+ D G+  D+ T    +   C +     A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + ++  G   D   ++I++    K G++++A  ++ +M D     +  TF  LI  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               +R+++AL L  ++T  G + D   ++++I  LCK     +AL+L+ EMK SG TPD
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                          E+T                   N+++  L S G + +A +LL+ M
Sbjct: 426 ---------------EVTY------------------NTLIDNLCSLGKLGKALDLLKDM 452

Query: 300 IKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                            + T  P +T +++ II+ L K  +++ A  +F +M   G  +N
Sbjct: 453 -----------------ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N LIDGLC   ++++++EL+ +M   G +P + T NS+    C++ D+  A +++ 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M   G E  V     LI  LCK G+   A + L  M  +G  P    Y+  +  L    
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCK-AQRVAEAEDLFNEMITKGLIPSVATY 537
            +  AL LFR++   G  PD + Y I+  GLC+    + EA D   EM+ KG IP  +++
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEK 563
            +L  G    G  D  +  +  ++EK
Sbjct: 676 RMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 85/443 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ CL   G +EEA  + +Q+   G C+P+  ++N L+ ALC    ++      +++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D YT   L+   C  G    AL +F E+ + G   DE  ++ L+      G++ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M+      +  T+  +I G  KK R+++A ++FD+M   G + +A  ++ +I G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK+K+++ A +L ++M   G+ P                               N +T 
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQP-------------------------------NNITY 534

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+      G I +A ++L+ M         G E+ ++  GT          +IN L
Sbjct: 535 --NSILTHYCKQGDIKKAADILETMTAN------GFEVDVVTYGT----------LINGL 576

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+  +AL + R M   G       YN ++  L   N + ++  L REM E G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +FR LCR                                    G   EAF F+ +
Sbjct: 637 LTYKIVFRGLCR----------------------------------GGGPIKEAFDFMLE 662

Query: 455 MVQEGFLPDIVCYSAAIGGLIDI 477
           MV +GF+P+   +     GL+++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNL 685


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 303/659 (45%), Gaps = 55/659 (8%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A LR+L   + +      P     +IR LG+VG ++   +L  +++REG  V     ++ 
Sbjct: 56  AALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSF 115

Query: 72  LLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           L     +    D V++ L ++Q  +G   D      LL V     +     SV++E+   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 131 GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G   + V F+ L+ A  +  +V  A  ++E M    +  +E TF  L+ GFV++  ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           L++  +M + G ++     +V+I G CK  ++E AL    +    G  PD          
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD---------- 285

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                                   +  N+ +  L  N  +  A  ++  M++        
Sbjct: 286 -----------------------QITYNTFVNGLCQNDHVGHALKVMDVMVQ-------- 314

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  +G   P+  +++I++N L K+G+L+ A  +  +M   GC+ ++  +N LI  L
Sbjct: 315 -------EGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-W 428
           C  NRLEE+ +L R++   G  P  +T N +   LC+  D   AL L  +M+  G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V +NT LI  LC  GK  +A   L DM   G     + Y+  I GL    R++ A E+F 
Sbjct: 427 VTYNT-LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   + + +N +I GLCK +++ +A +L N+MI++GL P+  TYN ++  +CK G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I +A   L  M        DV+TY TLI+GLC AGR   A+ +   M  KG  P    +
Sbjct: 546 DIKKAADILETM-TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP-PLAFEVLKEM 666
             ++  L + +  R AL  FR M E G  PD   +  +         P   AF+ + EM
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 257/556 (46%), Gaps = 56/556 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  ++N L++ALC++  V    + L+EM   G   D+ T T L+Q +   G  + AL V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +++ G     V  ++L+  + K G V+ A   I++        ++ T+   ++G  +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y++++  LCKN QLE A  + ++M   G  PD   
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIK 301
            + LI +                                 L +   +++A +L  Q  +K
Sbjct: 359 FNTLIAA---------------------------------LCTGNRLEEALDLARQVTVK 385

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G                 VSP+  +F+I+IN L K G   LAL LF EM   GC  +   
Sbjct: 386 G-----------------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LID LC+  +L ++ +LL++ME +G   +  T N++   LC++  +  A  +  +M 
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488

Query: 422 VQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +QG     +  NT LI  LCK  K  +AF  +  M+ EG  P+ + Y++ +        +
Sbjct: 489 LQGISRNAITFNT-LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++   + A+G   DVV Y  +I+GLCKA R   A  +   M  KG+ P+   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           +    +  NI  A L L R + +    PD +TY  +  GLC  G P  +A     EM +K
Sbjct: 608 LQSLFRRNNIRDA-LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 600 GCAPNRITFMALITGL 615
           G  P   +F  L  GL
Sbjct: 667 GFIPEFSSFRMLAEGL 682



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 232/506 (45%), Gaps = 55/506 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C     + N L+   CK   V D +    +E+ D G+  D+ T    +   C +     A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + ++  G   D   ++I++    K G++++A  ++ +M D     +  TF  LI  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               +R+++AL L  ++T  G + D   ++++I  LCK     +AL+L+ EMK SG TPD
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                          E+T                   N+++  L S G + +A +LL+ M
Sbjct: 426 ---------------EVTY------------------NTLIDNLCSLGKLGKALDLLKDM 452

Query: 300 IKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                            + T  P +T +++ II+ L K  +++ A  +F +M   G  +N
Sbjct: 453 -----------------ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N LIDGLC   ++++++EL+ +M   G +P + T NS+    C++ D+  A +++ 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M   G E  V     LI  LCK G+   A + L  M  +G  P    Y+  +  L    
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCK-AQRVAEAEDLFNEMITKGLIPSVATY 537
            +  AL LFR++   G  PD + Y I+  GLC+    + EA D   EM+ KG IP  +++
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEK 563
            +L  G    G  D  +  +  ++EK
Sbjct: 676 RMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 85/443 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ CL   G +EEA  + +Q+   G C+P+  ++N L+ ALC    ++      +++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D YT   L+   C  G    AL +F E+ + G   DE  ++ L+      G++ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M+      +  T+  +I G  KK R+++A ++FD+M   G + +A  ++ +I G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK+K+++ A +L ++M   G+ P                               N +T 
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQP-------------------------------NNITY 534

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+      G I +A ++L+ M         G E+ ++  GT          +IN L
Sbjct: 535 --NSILTHYCKQGDIKKAADILETMTAN------GFEVDVVTYGT----------LINGL 576

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+  +AL + R M   G       YN ++  L   N + ++  L REM E G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +FR LCR                                    G   EAF F+ +
Sbjct: 637 LTYKIVFRGLCR----------------------------------GGGPIKEAFDFMLE 662

Query: 455 MVQEGFLPDIVCYSAAIGGLIDI 477
           MV +GF+P+   +     GL+++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNL 685


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 307/641 (47%), Gaps = 44/641 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +N L+ A+ +    DLV    ++M+      D Y+
Sbjct: 61  GLEDAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F ++   G   + V F+ LL        V +A +L  ++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               R +  TF  L++G  ++ RV +A+ L D+M ++G   D   Y   + G+CK     
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCN 277
            AL L  +M+  S I P+  I S +I     +G  +    L ++   +D+ +    +  N
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE--MQDKGIFPNIVTYN 292

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++     +G    A  LLQ M++ +                +SPN  +++ +IN  +K+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERK----------------ISPNVVTYNALINAFVKE 336

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           GK   A  L+ EM   G + N   YN++IDG C  +RL+ + ++   M   G  P  FT 
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            ++    C  + +   + L+ +M  +G     V +NTL I   C  G    A      M+
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL-IHGFCLVGDLNAALDLSQQMI 455

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNII 505
             G  PDIV  +  + GL D  ++  ALE+F+       D+ A    +G  PDV+ YNI+
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-S 574

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            SP+V+T+ TLI+G C AGR DD + L+ EM  +G   + I ++ LI G  K      AL
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F+ M   G+ PD      +++ F S+     A  +L+++
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 163/636 (25%), Positives = 280/636 (44%), Gaps = 82/636 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G+V  +E  ++   L+ +++R+ + C  + YS+  L
Sbjct: 68  LFSDMLRSRPL--PSVIDF-NKLMGAVVRMERPDLVISLYQKMERKQIRC--DIYSFTIL 122

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T T LL   C   +  +AL +F++I     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC---R 179

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            D   F+ L+    + G V +A  L++RM +  ++ ++ T+   + G  K      AL L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 193 FDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
             KM + S    +  +Y  II GLCK+ +   +  L+ EM+  GI P+    + +I    
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 252 DEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+        
Sbjct: 300 ISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP------- 351

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   +G + PNT +++ +I+   K  +LD A  +F  M   GC  +VF +  LIDG
Sbjct: 352 --------RGII-PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-------- 420
            C + R+++  ELL EM   G      T N++    C   D+  AL+L ++M        
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 421 --------------------------------------RVQGHEPWVKHNTLLIKELCKH 442
                                                    G EP V    +LI  L   
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV +
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I+G CKA RV +  +LF EM  +G++     Y  LI G+ K GNI+ A+     M+ 
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI- 641

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
             SG  PD IT   ++ G       + A+ +  +++
Sbjct: 642 -SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 5/194 (2%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P V+ +N ++  + + +R      L+ +M  K +  
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +LI  +C    +  A+    + L K    PDV+T+TTL+ GLC+  R  +A+ L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGK-LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           ++++    C P+ +TF  L+ GLC+  R   A+     M E G++PD   +   +     
Sbjct: 174 FHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229

Query: 653 ELNPPLAFEVLKEM 666
             +   A  +L++M
Sbjct: 230 MGDTVSALNLLRKM 243


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 177/654 (27%), Positives = 293/654 (44%), Gaps = 26/654 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
            +R RR        + + + RC         L+ CL   G+ E+A  +F ++   G   P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   +  ++  L K+  V        +M+  G+  D      ++     +G   +AL V 
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + ++    V   V + IL+ +  K G +++A EL   M     R N   +  LIHGF K 
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+ +A  LFD+M ++G+  D   + V+I GLCK+   E A + + EM   G  P+    
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 244 SKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + +I   S  G +     ++   I      +++T +C  ++      G +D+A  LL  +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC--LLDGFCKLGRLDEAAQLLDEL 461

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS-LFREMTQIGCMQN 358
            K                 + SPN   +  ++  L   G ++  L  LF +        +
Sbjct: 462 DKC----------------SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLD 505

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD--VVGALNL 416
             L  ++I GLC + RL+E+  + + M   G KP   T N +   LCR ++  V  A  L
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  + + G+ P     T L   LCK G+   A + L +    G+  D+V Y+A   GL  
Sbjct: 566 LHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCY 625

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             +VD A+ LF+++   G  PD  AY  II+GL K +++ +A   F+EMI KG  P+VAT
Sbjct: 626 QGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVAT 685

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L+   C +GN+D+A      ML +      V+ Y  LI G C A + D A+ L+ +M
Sbjct: 686 YTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM 745

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +G  P  +T  +L  GL +  +   A    + M   G  P    F A++   
Sbjct: 746 ISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 268/613 (43%), Gaps = 36/613 (5%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YNCL+  L    +        +EM   G   + ++   L++ +  + + D A++ F E
Sbjct: 120 FTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF-E 178

Query: 127 IIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF-CVLIHGFVKK 183
           I+       D H F IL+    K G  +KA E+   M        ++     ++   +K 
Sbjct: 179 IMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RV +A ++F +M K GF  DA  Y+ +I GL K    + AL++   M      P     
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298

Query: 244 SKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             L+ S    G L    +   +         +++  S++     +G + +A +L   M++
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  +  ++I+ L K G  + A   F EM + GC  NV  
Sbjct: 359 A----------------GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  +I GL    R+  ++ +++ M   G  P   T   +    C+   +  A  L+ ++ 
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFL---TDMVQEGFLPDIVCYSAAIGGLIDIK 478
                P ++  + L+K LC  G        L   +    E   P + C  + I GL    
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTG 520

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ--RVAEAEDLFNEMITKGLIPSVAT 536
           R+D A  +F+ + + GC PD   YNI+I+GLC+++  RV  A  L +++   G +P   T
Sbjct: 521 RLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVT 580

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESG---SPDVITYTTLIDGLCIAGRPDDAIMLW 593
           Y  L  G CK G +D+A+    +MLE+ S    + DV+ YT L  GLC  G+ D A+ L+
Sbjct: 581 YTPLCIGLCKIGEVDRAV----KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM  +G AP+   +  +I GL K  +   A   F  M  KG KP +  + AL+ A    
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696

Query: 654 LNPPLAFEVLKEM 666
            N   AF   + M
Sbjct: 697 GNVDEAFHRFEGM 709



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 253/576 (43%), Gaps = 33/576 (5%)

Query: 1   MASILSRARRIAPLR-VLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVK 57
           M   L +A+R+   R V  Q     +C   P A+ +  +I  L   G  +EA  + D + 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQ---MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            +  CVP   +Y  L+ +LCK+ +++  E   + M   G+  +    T L+  +  SG+ 
Sbjct: 288 AKA-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            +A S+F+E+++ G+  D    ++++    K G  ++A +  E M     + N  T+  +
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K  RV  A ++   M   G   D+  Y  ++ G CK  +L+ A QL  E+     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAY 293
           +P+ ++ S L+    D G +   + +++E        L   LC SI+  L   G +D+A 
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVS---------------------PNTSSFDIIIN 332
            + Q M+      D     ++I     S                     P+  ++  +  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++D A+ +  E +  G   +V  Y  L  GLC   +++ +  L +EM   G  P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                  +   L + + +  A     +M  +G +P V   T L++ LC  G   EAF   
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 453 TDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             M+  G  +  ++ Y A I G     +VD AL+LF D+ + G  P  V    +  GL +
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + +  +A++L  EM   G  P  AT+  +++G  KS
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 206/461 (44%), Gaps = 29/461 (6%)

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEG 254
           ++GF  D   Y+ ++  L   K       ++ EM  +GI P+   F IL +         
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 255 ELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           +     + +   R   D++T  +L +     L   G  ++A+ +   M+           
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVD----CLCKAGMDEKAFEVFHEMMA---------- 217

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                 G V P+ +    ++ TLLK  ++  A  +F +M + G   +   YN +IDGL  
Sbjct: 218 -----MGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK 272

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +   +E+ ++L  M      PT  T   +   LC+   +  A  L R M   G  P    
Sbjct: 273 AGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI 332

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T LI    K G+  EA     +MV+ G+ PD++ ++  I GL      + A + F ++ 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             GC P+VV Y  II GL K  RVA A  +   MI  G  P   TY  L++G+CK G +D
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM-- 609
           +A   L   L+K S SP++  Y++L+ GLC  G  ++ +    E + K  A N    +  
Sbjct: 453 EAAQLLDE-LDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFE-QSKAAAENLDPGLCC 510

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           ++I GLCK  R   A   F+ M  +G KPD   +  LI+  
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 37/317 (11%)

Query: 386 EESGFK-----------------------------------PTHFTLNSMFRCLCRRQDV 410
           E++GF+                                   P  F+ N + R   R +  
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL-PDIVCYSA 469
             A+     M+ +  +P +    +L+  LCK G   +AF    +M+  GF+ PD   ++A
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  L+  KRV  A E+F  +   G  PD +AYN +I GL KA    EA  + + M+ K 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            +P+  TY +L+N  CK+G +++A   L R++      P+ + YT+LI G   +GR  +A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEE-LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L++EM E G  P+ IT   +I GLCK      A   F  M   G KP++  +  +I  
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409

Query: 650 FLSELNPPLAFEVLKEM 666
                    AF ++K M
Sbjct: 410 LSKIGRVANAFRIMKGM 426



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 193/479 (40%), Gaps = 106/479 (22%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G ++EA  LFD++   G   P+  ++  +++ LCKS + +      +EM   
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGY-RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +  T T ++Q     G+   A  +   +I HG + D   +  LL  F K G +D+A
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEA 454

Query: 155 CELIERMDDCNIRLNEKTF------------------------------------CVLIH 178
            +L++ +D C+   N + +                                    C +I 
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV 514

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ--LEMALQLYSEMKGSGI 236
           G  K  R+D+A ++F +M   G   DA  Y+++I GLC++++  +E A  L  +++  G 
Sbjct: 515 GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY 574

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSID 290
            PD    + L       GE+   VK + E      + DV   T LC      L   G +D
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG----LCYQGQVD 630

Query: 291 QAYNLLQAM-------------------IKGEPIAD--------VG-------------V 310
           +A +L Q M                   IKG+ + D        +G             V
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 311 EML---------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           + L               M+ +G +  +   +D +I+   K  K+D AL LF +M   G 
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           +       +L DGL  S + E++ ELL+EM   G  P   T  ++   L R+ D  G L
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL-RKSDESGKL 808



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 125/314 (39%), Gaps = 56/314 (17%)

Query: 406 RRQDVVGAL-NLVRKMRVQGHEPWVKHN-----------------TLLIKELCKHGKAME 447
           RR D+V ++   ++ +R+ G   W  HN                   +++ L   G A+ 
Sbjct: 46  RRADLVTSIVETIKDVRLDG-SSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAIS 104

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            FR+  +  Q GF  D+  Y+  +  L+  K       +  ++   G  P+  ++NI+I 
Sbjct: 105 FFRWAGE--QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------- 560
              + +R  +A   F  M  K   P + T+ +L++  CK+G  ++A      M       
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222

Query: 561 ----------------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
                                       +EK    PD I Y T+IDGL  AG   +A+ +
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            + M  K C P  +T+  L+  LCK      A   FR+M   G +P+  ++ +LI  F  
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342

Query: 653 ELNPPLAFEVLKEM 666
                 A  +  EM
Sbjct: 343 SGRMKEACSLFDEM 356



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 101/257 (39%), Gaps = 41/257 (15%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE A  L   ++  G  +P+  +Y  L   LCK   VD     L+E    GW  D    T
Sbjct: 559 VERAFALLHDLEMVGY-LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L    C  GQ D+A+S+F E++  G   D   +  ++    K  +++ AC+  + M   
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGK 677

Query: 165 NIRLNEKTFCVL------------------------------------IHGFVKKSRVDK 188
             +    T+  L                                    IHGF K  +VD 
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDA 737

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL+LF+ M   G    A     +  GL ++ + E A +L  EM   G  P     + ++ 
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797

Query: 249 SC--SDE-GELTLLVKE 262
               SDE G+L  LV+E
Sbjct: 798 GLRKSDESGKLLKLVQE 814


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 307/641 (47%), Gaps = 44/641 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D ++   L  P+   +N L+ A+ +    DLV    ++M+      D Y+
Sbjct: 61  GLEDAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F ++   G   + V F+ LL        V +A +L  ++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               R +  TF  L++G  ++ RV +A+ L D+M ++G   D   Y   + G+CK     
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCN 277
            AL L  +M+  S I P+  I S +I     +G  +    L ++   +D+ +    +  N
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE--MQDKGIFPNIVTYN 292

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++     +G    A  LLQ M++ +                +SPN  +++ +IN  +K+
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERK----------------ISPNVVTYNALINAFVKE 336

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           GK   A  L+ EM   G + N   YN++IDG C  +RL+ + ++   M   G  P  FT 
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            ++    C  + +   + L+ +M  +G     V +NTL I   C  G    A      M+
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL-IHGFCLVGDLNAALDLSQQMI 455

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNII 505
             G  PDIV  +  + GL D  ++  ALE+F+       D+ A    +G  PDV+ YNI+
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I GL    +  EAE+L+ EM  +G++P   TY+ +I+G CK   +D+A      M  K S
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-S 574

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            SP+V+T+ TLI+G C AGR DD + L+ EM  +G   + I ++ LI G  K      AL
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F+ M   G+ PD      +++ F S+     A  +L+++
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/636 (25%), Positives = 280/636 (44%), Gaps = 82/636 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANM---LFDQVKREGL-CVPNNYSYNCL 72
           L  D+++SR    P  + F  + +G+V  +E  ++   L+ +++R+ + C  + YS+  L
Sbjct: 68  LFSDMLRSRPL--PSVIDF-NKLMGAVVRMERPDLVISLYQKMERKQIRC--DIYSFTIL 122

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++  C    +        ++   G   D  T T LL   C   +  +AL +F++I     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC---R 179

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            D   F+ L+    + G V +A  L++RM +  ++ ++ T+   + G  K      AL L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 193 FDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
             KM + S    +  +Y  II GLCK+ +   +  L+ EM+  GI P+    + +I    
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 252 DEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             G  +    L++E+ E R ++   +  N+++   V  G   +A  L   M+        
Sbjct: 300 ISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP------- 351

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   +G + PNT +++ +I+   K  +LD A  +F  M   GC  +VF +  LIDG
Sbjct: 352 --------RGII-PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-------- 420
            C + R+++  ELL EM   G      T N++    C   D+  AL+L ++M        
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 421 --------------------------------------RVQGHEPWVKHNTLLIKELCKH 442
                                                    G EP V    +LI  L   
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +    P+VV +
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I+G CKA RV +  +LF EM  +G++     Y  LI G+ K GNI+ A+     M+ 
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI- 641

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
             SG  PD IT   ++ G       + A+ +  +++
Sbjct: 642 -SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 184/413 (44%), Gaps = 34/413 (8%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +++ LF +++ +G+  PN  +YNC++   C S      +  L+EM +     +  T
Sbjct: 267 GRHSDSHNLFIEMQDKGI-FPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT 325

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  +   G+F +A  +++E++  G +   + ++ ++  F K   +D A ++   M 
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  TF  LI G+    R+D  ++L  +M + G  ++   Y+ +I G C    L 
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR----------DV 269
            AL L  +M  SG+ PD    + L+    D G+L     + K + + +           V
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG---EPIADVGVE 311
               L  N ++  L++ G   +A  L +               +MI G   +   D   +
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 312 MLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           M + +   + SPN  +F+ +IN   K G++D  L LF EM + G + +  +Y  LI G  
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
               +  + ++ +EM  SG  P   T+ +M      ++++  A+ ++  +++ 
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 5/194 (2%)

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  +IK ++ A++LF D+      P V+ +N ++  + + +R      L+ +M  K +  
Sbjct: 55  GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +LI  +C    +  A+    + L K    PDV+T+TTL+ GLC+  R  +A+ L
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGK-LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           ++++    C P+ +TF  L+ GLC+  R   A+     M E G++PD   +   +     
Sbjct: 174 FHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229

Query: 653 ELNPPLAFEVLKEM 666
             +   A  +L++M
Sbjct: 230 MGDTVSALNLLRKM 243


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 236/483 (48%), Gaps = 51/483 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF V++  F K+ ++    +LF++M  +G + D   Y+++I G  K  +++ A +LY
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM   G+ P                                      NS++        
Sbjct: 67  EEMVSVGLEPSIYTY---------------------------------NSLLNAFCKETK 93

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS-LF 347
           + +A  L + M      A+ G E          P+  ++  II+ L K GK+  AL  LF
Sbjct: 94  MKEAMELFKTM------AEKGFE----------PDVVTYSTIISGLCKTGKVTEALEMLF 137

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M + GC  N   YN LI+GLC    +E +Y+LL EM   G+ P + T N++   LCR 
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V  A      M  +G+ P V     L+  L K GK  EA +   D++ +G++PD V Y
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++ + GL     +D A E+F+ + A GC P+   Y+I++SG C+A++V +A  +  EM  
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G +P V TYN+L++G CK+  +D+A    S M++    +PD+++Y+ +++GLC   +  
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD-NGCAPDIVSYSVVLNGLCKTNKVH 376

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           DA +L++ M E+   P+ +TF  L+ GLCK  +   A      M   G  PD   +  L+
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436

Query: 648 SAF 650
           +  
Sbjct: 437 NGL 439



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 230/468 (49%), Gaps = 20/468 (4%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           ++YT   +L+ +C  G+      +F +++D+G   + + ++IL+  ++K G VD+A  L 
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E M    +  +  T+  L++ F K++++ +A++LF  M + GF  D   Y  II GLCK 
Sbjct: 67  EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126

Query: 219 KQLEMALQ-LYSEMKGSGITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLL 275
            ++  AL+ L+ +M   G + +    + LI   C DE  E    + E    +      + 
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            N+I+  L   G + +A     +M                 +G  SP+  +++ +++ L 
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPS---------------RG-YSPDVVAYNGLLDALY 230

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+GK D A+ LF+++   G M +   YN+++ GL   + ++E+ E+ ++M  SG  P   
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T + +    CR + V  A  ++ +M   G  P V    +L+  LCK     +A    + M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V  G  PDIV YS  + GL    +V  A  LF  +      PDVV +NI++ GLCKA ++
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            EA+DL ++M   G  P    YN L+NG  K G   QA      M EK
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 230/475 (48%), Gaps = 22/475 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN Y++  +L++ CK   +       ++M D G   D      L+  Y   G+ D+A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 122 SVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            ++ E++  G     + ++ LL AF K  ++ +A EL + M +     +  T+  +I G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 181 VKKSRVDKALQ-LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            K  +V +AL+ LF KM + G +++   Y+ +I GLCK++ +E A +L  EM   G  PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 240 FEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + +++     G+++   K+ ++    R  +   +  N ++  L   G  D+A  L 
Sbjct: 184 NITYNTILSGLCRMGKVSE-AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + +I                KG + P+T +++ I+  L +   +D A  +F++M   GC 
Sbjct: 243 KDVIA---------------KGYM-PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCA 286

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N   Y+ ++ G C + ++++++++L EM + G  P   T N +   LC+   V  A  L
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 346

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M   G  P +   ++++  LCK  K  +A      M++   +PD+V ++  + GL  
Sbjct: 347 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             ++D A +L   +   GC PD VAYN +++GL K  R  +A+ L   M  KG +
Sbjct: 407 AGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 217/470 (46%), Gaps = 32/470 (6%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP    F  +++     G + +   LF+Q+   G+  P+   YN L++   K   VD   
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGIS-PDGIEYNILIDGYAKKGRVDEAN 63

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
              +EM   G     YT   LL  +C   +  +A+ +F  + + G+  + V +S ++   
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 146 SKWGEVDKACE-LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            K G+V +A E L  +M +     N   +  LI+G  K   +++A +L ++M   G+  D
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y+ I+ GLC+  ++  A Q +  M   G +PD    + L+ +   EG+    +K ++
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK-LF 242

Query: 265 ED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-------------------KG 302
           +D   +     T+  NSI+  L    ++D+A  + + M+                   + 
Sbjct: 243 KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           + + D    +  + K    P+  +++I+++ L K   +D A  LF  M   GC  ++  Y
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + +++GLC +N++ ++  L   M E    P   T N +   LC+   +  A +L+ +M  
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422

Query: 423 QGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            G  P +V +NTL+   L K G+ ++A R    M ++GFL D  C+ A +
Sbjct: 423 SGCAPDYVAYNTLM-NGLRKQGRHIQADRLTQAMKEKGFLSD--CFKAPL 469



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 119/233 (51%)

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +++K  CK GK  + ++    M+  G  PD + Y+  I G     RVD A  L+ ++ + 
Sbjct: 13  VVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P +  YN +++  CK  ++ EA +LF  M  KG  P V TY+ +I+G CK+G + +A
Sbjct: 73  GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L   + +   S + + Y  LI+GLC     + A  L  EM  KG  P+ IT+  +++
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLC+  +   A   F  M  +G  PD+  +  L+ A   E     A ++ K++
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 2/173 (1%)

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+   + +++   CK  ++ +   LF +M+  G+ P    YN+LI+G+ K G +D+A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M+      P + TY +L++  C   +  +A+ L+  M EKG  P+ +T+  +I+G
Sbjct: 64  RLYEEMVS-VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 615 LCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LCK  +   AL + F  M E+G   +   + ALI+    + N   A+++L+EM
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 302/659 (45%), Gaps = 55/659 (8%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A LR+L   + +      P     +IR LG+VG ++   +L  +++REG  V     ++ 
Sbjct: 56  AALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSF 115

Query: 72  LLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           L     +    D V++ L ++Q  +G   D      LL V     +     SV++E+   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 131 GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G   + V F+ L+ A  +  +V  A  ++E M    +  +E TF  L+ GFV++  ++ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           L++  +M + G ++     +V+I G CK  ++E AL    +    G  PD          
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD---------- 285

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                                   +  N+ +  L  N  +  A  ++  M++        
Sbjct: 286 -----------------------QITYNTFVNGLCQNDHVGHALKVMDVMVQ-------- 314

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  +G   P+  +++I++N L K+G+L+ A  +  +M   GC+ ++  +N LI  L
Sbjct: 315 -------EGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-W 428
           C  NRLEE+ +L R++   G  P  +T N +   LC+  D   AL L  +M+  G  P  
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V +NT LI  LC  GK  +A   L DM   G     + Y+  I GL    R++ A E+F 
Sbjct: 427 VTYNT-LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   + + +N +I GLCK +++ +A  L N+MI++GL P+  TYN ++  +CK G
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I +A   L  M        DV+TY TLI+GLC AGR   A+ +   M  KG  P    +
Sbjct: 546 DIKKAADILETM-TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP-PLAFEVLKEM 666
             ++  L + +  R AL  FR M E G  PD   +  +         P   AF+ + EM
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 257/556 (46%), Gaps = 56/556 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  ++N L++ALC++  V    + L+EM   G   D+ T T L+Q +   G  + AL V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +++ G     V  ++L+  + K G V+ A   I++        ++ T+   ++G  +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y++++  LCKN QLE A  + ++M   G  PD   
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIK 301
            + LI +                                 L +   +++A +L  Q  +K
Sbjct: 359 FNTLIAA---------------------------------LCTGNRLEEALDLARQVTVK 385

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G                 VSP+  +F+I+IN L K G   LAL LF EM   GC  +   
Sbjct: 386 G-----------------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LID LC+  +L ++ +LL++ME +G   +  T N++   LC++  +  A  +  +M 
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488

Query: 422 VQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +QG     +  NT LI  LCK  K  +AF  +  M+ EG  P+ + Y++ +        +
Sbjct: 489 LQGISRNAITFNT-LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++   + A+G   DVV Y  +I+GLCKA R   A  +   M  KG+ P+   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           +    +  NI  A L L R + +    PD +TY  +  GLC  G P  +A     EM +K
Sbjct: 608 LQSLFRRNNIRDA-LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666

Query: 600 GCAPNRITFMALITGL 615
           G  P   +F  L  GL
Sbjct: 667 GFIPEFSSFRMLAEGL 682



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 231/506 (45%), Gaps = 55/506 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C     + N L+   CK   V D +    +E+ D G+  D+ T    +   C +     A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + ++  G   D   ++I++    K G++++A  ++ +M D     +  TF  LI  
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               +R+++AL L  ++T  G + D   ++++I  LCK     +AL+L+ EMK SG TPD
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                          E+T                   N+++  L S G + +A +LL+ M
Sbjct: 426 ---------------EVTY------------------NTLIDNLCSLGKLGKALDLLKDM 452

Query: 300 IKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                            + T  P +T +++ II+ L K  +++ A  +F +M   G  +N
Sbjct: 453 -----------------ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N LIDGLC   ++++++ L+ +M   G +P + T NS+    C++ D+  A +++ 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M   G E  V     LI  LCK G+   A + L  M  +G  P    Y+  +  L    
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCK-AQRVAEAEDLFNEMITKGLIPSVATY 537
            +  AL LFR++   G  PD + Y I+  GLC+    + EA D   EM+ KG IP  +++
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEK 563
            +L  G    G  D  +  +  ++EK
Sbjct: 676 RMLAEGLLNLGMDDYFIRAIEIIMEK 701



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 189/443 (42%), Gaps = 85/443 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ CL   G +EEA  + +Q+   G C+P+  ++N L+ ALC    ++      +++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D YT   L+   C  G    AL +F E+ + G   DE  ++ L+      G++ KA
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M+      +  T+  +I G  KK R+++A ++FD+M   G + +A  ++ +I G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK+K+++ A  L ++M   G+ P                               N +T 
Sbjct: 506 LCKDKKIDDAFGLINQMISEGLQP-------------------------------NNITY 534

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+      G I +A ++L+ M         G E+ ++  GT          +IN L
Sbjct: 535 --NSILTHYCKQGDIKKAADILETMTAN------GFEVDVVTYGT----------LINGL 576

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+  +AL + R M   G       YN ++  L   N + ++  L REM E G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +FR LCR                                    G   EAF F+ +
Sbjct: 637 LTYKIVFRGLCR----------------------------------GGGPIKEAFDFMLE 662

Query: 455 MVQEGFLPDIVCYSAAIGGLIDI 477
           MV +GF+P+   +     GL+++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNL 685


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 275/566 (48%), Gaps = 29/566 (5%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDK-ALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           M D G+  D  T   +L+    S +       + +EI D G   + V  + +L       
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +   A  L ++M +    +N  T+  LIH   K   +D+A+ L   M   G      +++
Sbjct: 61  DTTTAMALFDKMAELGA-VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWED 266
           V+IGGLC+  +L  AL +Y +M  +   PDF   +KL+   S  G L     +++E+   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           R V   T L   +++ L     +D A  L++ M+                +G ++ N  +
Sbjct: 179 RHVPDNTTL-TVVVQSLCLGDRVDDARELVEEMLH---------------RG-MAANAIT 221

Query: 327 FDIIINTLLKDGKLDLALSLF-REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +  +++ L K  +LD A++L   E+T+ G   ++  Y+ +IDGLC + RL ++ ++  EM
Sbjct: 222 YSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 281

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 PT  T NS+    CR  D+  A+ L+ KM      P V   T L+   CK G+ 
Sbjct: 282 S---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRL 338

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A+     MV     PD+V +++ + GL    R++ ALEL  +I   GC P +  YN +
Sbjct: 339 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 398

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           + G CK+ +V +AE+L  +  ++G +P+  TYN+L+ G C++G  DQA+  L ++  +  
Sbjct: 399 VDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458

Query: 566 GSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             P  V  Y  ++D LC  GR DDA+  + EM ++G  P   TF  ++  LCK  +P+ A
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
                 M + G  P      A++SA+
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAY 544



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 232/508 (45%), Gaps = 22/508 (4%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  LFD++   G    N+ +Y  L+  LCK+  +D     L +M+  G          ++
Sbjct: 65  AMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVI 122

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
              C +G+   AL V+ ++ D    D   ++ L+   SK G +  A ++++ M       
Sbjct: 123 GGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T  V++       RVD A +L ++M   G A++A  Y  ++ GLCK ++L+ A+ L 
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 229 -SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
             E+   G TPD    S +I      G L   V +I+E+       +  NS++      G
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV-DIFEEMSCAPTAITYNSLIGGYCRAG 301

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D+A  LL  M+                    +P+  ++  +++   K G+LD A  LF
Sbjct: 302 DMDEAIRLLGKMVDD----------------NCAPDVITYTTLMSAFCKMGRLDDAYELF 345

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           ++M       +V  + +L+DGLC   R+E++ ELL E+   G  PT +T N +    C+ 
Sbjct: 346 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKS 405

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL--PDIV 465
             V  A  LV   R +G  P      +L+   C+ G+  +A ++L  +  EG      + 
Sbjct: 406 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 465

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  +  L    R D A++ + ++   G  P    +  ++  LCKA +  +A +L  EM
Sbjct: 466 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQA 553
           I  G  P   T + +++ +C++G I +A
Sbjct: 526 IKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 174/348 (50%), Gaps = 7/348 (2%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP+    + I+  L        A++LF +M ++G + +   YN LI  LC +  L+E+ 
Sbjct: 42  LSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAM 100

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL +M+  G  P     N +   LCR   +  AL + R+M    H P     T L+  L
Sbjct: 101 GLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGL 159

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K G+  +A + L +MV    +PD    +  +  L    RVD A EL  ++   G   + 
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219

Query: 500 VAYNIIISGLCKAQRVAEAEDLF-NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           + Y+ ++ GLCK +R+ EA  L   E+  +G  P + TY+ +I+G CK+G +  A+    
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV---- 275

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            + E+ S +P  ITY +LI G C AG  D+AI L  +M +  CAP+ IT+  L++  CK 
Sbjct: 276 DIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R   A   F+ M    + PD+  F +L+     E     A E+L+E+
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 195/424 (45%), Gaps = 26/424 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIR--CLGSVGLVEEANMLFDQVKREGLC 62
           LS+A R+     + Q++V +R       L  +++  CLG    V++A  L +++   G+ 
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD--RVDDARELVEEMLHRGMA 216

Query: 63  VPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
             N  +Y+ L++ LCK   +D  V + L E+   G+  D  T + ++   C +G+   A+
Sbjct: 217 A-NAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +F E+          ++ L+  + + G++D+A  L+ +M D N   +  T+  L+  F 
Sbjct: 276 DIFEEM--SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC 333

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  R+D A +LF +M  +  + D   +  ++ GLC   ++E AL+L  E+   G  P   
Sbjct: 334 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 393

Query: 242 ILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             + ++       ++    +E+  D   R     T+  N ++      G  DQA   L  
Sbjct: 394 TYNCVVDGYCKSNQVRK-AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL-- 450

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                       + L    G    + + + II++ L +DG+ D A+  + EM Q G +  
Sbjct: 451 ------------DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 498

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +  ++  LC +++ ++++ELL EM + G  P   T +++    CR   +  A  L  
Sbjct: 499 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 558

Query: 419 KMRV 422
           ++R+
Sbjct: 559 ELRL 562


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 183/663 (27%), Positives = 308/663 (46%), Gaps = 45/663 (6%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           ++ QDV+    +M+      L+  L    ++ E   L++++   G+   ++++ + ++ A
Sbjct: 176 MICQDVIPWVPYMN-----ILLTALVRRNMIGELRDLYNKMVLRGI-YGDHFTVHVMVRA 229

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-D 134
             K   V+  E   +E ++ G   D    + ++Q  C     +  L +  E+ + GWV  
Sbjct: 230 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 289

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E  F+ ++VA    G + +A  L E M +C   +N      L+ G+  +  +D AL LF+
Sbjct: 290 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 349

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           K+T+ G   +   Y V+I G C +  +E A +LY++MK +GI P    ++ L+       
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG----- 404

Query: 255 ELTLLVKEIWEDRD-----------VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
               L   +WE+              N  T   N +M  L   G +D+A +LL  M+   
Sbjct: 405 ---YLKAPLWEEASKLFDEAVDCGVANIFTY--NIMMSWLCKGGKMDEACSLLDNMVN-- 457

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +G V PN  S++ +I    + G +D+A S+F +M       NV  Y+
Sbjct: 458 -------------QGMV-PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 503

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LIDG       E++ +L  +M      PT FT N++   LC+   +  A + ++    +
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       ++    K G    A     +M + G  P++V Y++ I G     R+DLA
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L+   ++   G   DV AY+ +I G CK + +  A+DLF E++  GL P+   YN +I+G
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +    N++ A++   +M+       D+ TYTTLIDGL   GR   A  L+ EM  KG  P
Sbjct: 684 FRDLNNMEAALVWYKKMINDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           + ITF  L+ GLC   +   A      M  K M P + ++  LI+ +  E N   AF + 
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 802

Query: 664 KEM 666
            EM
Sbjct: 803 DEM 805



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 263/555 (47%), Gaps = 58/555 (10%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACE 156
           D      LL  Y  + + + A+  FN +I      WV     +ILL A  +   + +  +
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVP--YMNILLTALVRRNMIGELRD 206

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           L  +M    I  +  T  V++   +K+ RV++A + F +  + G   DA  Y +II  +C
Sbjct: 207 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 266

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K     + L+L  EMK  G  P     + +I +C                          
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC-------------------------- 300

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
                  V+ G++ +A  L + MI  G+P+  V    LM  KG  +              
Sbjct: 301 -------VAQGNMVEALRLKEEMINCGKPMNLVVATSLM--KGYCA-------------- 337

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G LD AL+LF ++T+ G   N   Y+ LI+G CNS  +E++ EL  +M+ +G  P+ F
Sbjct: 338 -QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 396

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            +NS+ R   +      A  L  +    G      +N +++  LCK GK  EA   L +M
Sbjct: 397 NVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN-IMMSWLCKGGKMDEACSLLDNM 455

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V +G +P++V Y+  I G      +D+A  +F D+ A    P+VV Y+I+I G  K    
Sbjct: 456 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A DLF++M++  + P+  T+N +ING CK G + +A   L   LE E   P  +TY +
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE-EGFIPSCMTYNS 574

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           ++DG    G  D A+ ++ EM E G +PN +T+ +LI G CK +R   AL     M+EKG
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634

Query: 636 MKPDMFVFVALISAF 650
           ++ D+  + ALI  F
Sbjct: 635 LELDVTAYSALIDGF 649



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           F+  H   N +     R   +  A++    M  Q   PWV +  +L+  L +     E  
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                MV  G   D       +   +   RV+ A E FR+    G   D  AY+III  +
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP- 568
           CK        +L  EM  +G +PS AT+  +I      GN+ +A+     M+    G P 
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI--NCGKPM 323

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +++  T+L+ G C  G  D A+ L+N++ E G  PN++T+  LI G C       A   +
Sbjct: 324 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 383

Query: 629 RMMKEKGMKPDMFVFVALISAFL 651
             MK  G+ P +F   +L+  +L
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYL 406


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 182/636 (28%), Positives = 294/636 (46%), Gaps = 63/636 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +  ++  D V+   L  P+   +  L+  + +   +D+V    ++M+      + Y+
Sbjct: 58  GLEDAIDLFGDMVRSRPL--PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L++ +C+  +   ALS F +I   G+    V FS LL        + +A +L  +M 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             N+     TF  L++G  ++ RV +A+ L D+M + G   +   Y  I+ G+CK     
Sbjct: 176 KPNV----VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231

Query: 223 MALQLYSEMKG-SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            AL L  +M+  S I P+  I      +C   G                           
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMING--------------------------- 264

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
              S+G   +A  LLQ M++               +  +SP+  +++ +IN  +K+GK  
Sbjct: 265 -FCSSGRWSEAQQLLQEMLE---------------RKKISPDVVTYNALINAFVKEGKFF 308

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L+ EM   G + +   Y+++IDG C  NRL+ +  +   M   G  P   T N++ 
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              CR + V   + L+ +M   G        T LI   C+ G    A   L +MV  G  
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIISGLC 510
           P++V  +  + GL D  ++  ALE+F+       DI A    +G  PDV  YNI+ISGL 
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
              +  EAE+L+ EM  +G++P   TYN +I+G CK   +D+A      M  K S SP+V
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK-SFSPNV 547

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +T+TTLI+G C AGR DD + L+ EM  +G   N IT++ LI G  K      AL  F+ 
Sbjct: 548 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQE 607

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M   G+ PD      +++   S+     A  +L+++
Sbjct: 608 MMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 32/403 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I    S G   EA  L  ++       P+  +YN L+ A  K       E    EM   
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G      T + ++  +C   + D A  +F  +   G   + + F+ L+  + +   VD  
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M +  +  N  T+  LIHGF +   ++ A  L  +M  SG   +    + ++ G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 215 LCKNKQLEMALQLYSEMKGS-----------GITPDFEILSKLITSCSDEGELTLLVKEI 263
           LC N +L+ AL+++  M+ S           G+ PD +  + LI+   +EG+  L  +E+
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKF-LEAEEL 499

Query: 264 WED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           +E+   R +   T+  NS++  L     +D+A  +  +M                   + 
Sbjct: 500 YEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM----------------GSKSF 543

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SPN  +F  +IN   K G++D  L LF EM + G + N   Y  LI G      +  + +
Sbjct: 544 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALD 603

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           + +EM  SG  P   T+ +M   L  ++++  A+ ++  +++ 
Sbjct: 604 IFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 169/643 (26%), Positives = 316/643 (49%), Gaps = 26/643 (4%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           C+ S  L+E  ++L  Q+ R     P   +Y  L+ AL +    D +     +MQ+ G+ 
Sbjct: 36  CVKSRKLIEAFDLL--QMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYE 93

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
            + + LT L++V+   G+ D ALS+ +E+  + +  D  ++++ +  F K G+VD A + 
Sbjct: 94  VNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKF 153

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              M    +  ++ T+  ++    K +R+D+A+++F++M ++     A  Y+ +I G   
Sbjct: 154 FHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGS 213

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-- 275
             + + A  L    +  G  P     + ++T    +G+    ++ I+E+   + M  L  
Sbjct: 214 AGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALR-IFEEMKRDAMPNLPT 272

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---------------FKG-- 318
            N I+ +L   G+++ A+ +  AM +     +V    +MI               F+G  
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMD 332

Query: 319 --TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
               SP+ ++F  +I+ L K G++D A  ++  M     + NV +Y +LI      +R E
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKE 392

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           + +++ +EM  SG  P    LN+   C+ +  +      L  +++ +G  P  +  ++LI
Sbjct: 393 DGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             L K G A E +     M  +G + D   Y+  I G     +V+ A +L  ++   G  
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P VV Y  ++ GL K  R+ EA  LF E  + G+  +   Y+ LI+G+ K G +D+A L 
Sbjct: 513 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV 572

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           +  M++K   +P+V T+  L+DGL  A   ++A++ +  M++  C PN+IT+  LI GLC
Sbjct: 573 MEEMMQK-GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLC 631

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           K  +   A V ++ M+++G+KP+   + A+IS      N   A
Sbjct: 632 KVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQA 674



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 175/640 (27%), Positives = 302/640 (47%), Gaps = 29/640 (4%)

Query: 4   ILSRARRI-APLRVLAQDVVKSRCFMSPGAL-GFLIRCLGSVGLVEEANMLFDQVKREGL 61
           + SR  R+ A L +L  D +KS  F +   L    I C G VG V+ A   F ++K  GL
Sbjct: 105 VFSREGRVDAALSLL--DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGL 162

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            VP++ +Y  ++  LCK+  +D      ++M+        Y    ++  Y ++G+FD+A 
Sbjct: 163 -VPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAY 221

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           S+       G +   V ++ +L    K G+ DKA  + E M   +   N  T+ ++I   
Sbjct: 222 SLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGML 280

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K   V+ A ++ D M ++G   +    +++I  LCK ++L+ A  ++  M     +PD 
Sbjct: 281 CKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340

Query: 241 EILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                LI     +G +     + E   D D     ++  S++R        +  + + + 
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400

Query: 299 MIKGEPIADV---GVEMLMIFKGTVS----------------PNTSSFDIIINTLLKDGK 339
           M++     D+      M  +FK   +                P+T S+ I+I++L+K G 
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
                 L+  M   GC+ +   YN +IDG C S ++ ++Y+LL EM+  G  PT  T  S
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L +   +  A  L  + +  G E      + LI    K G+  EA+  + +M+Q+G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++  ++  + GL+  + ++ AL  F+ +    C P+ + Y I+I+GLCK ++  +A 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             + EM  +GL P+  TY  +I+G  KSGN+ QA     R      G PD  +Y  +I+G
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFER-FRASGGIPDSASYNAMIEG 699

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           L IA R  DA  L+ E   KGC+ +  T +AL+  L K +
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAE 739



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 279/595 (46%), Gaps = 23/595 (3%)

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           + ++ + D +E  L EM   G+G   YT   L+     S +  +A  +   +    +   
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 136 -HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
              ++ L+ A S+ GE D+   L  +M +    +N      LI  F ++ RVD AL L D
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M  + F +D  +Y+V I    K  +++MA + + EMK +G+ PD    + ++       
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 255 ELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
            L   V EI+E  + N         N+++    S G  D+AY+LL+              
Sbjct: 181 RLDEAV-EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRA---------- 229

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                KG + P+  +++ I+  L K GK D AL +F EM +   M N+  YN +I  LC 
Sbjct: 230 -----KGCI-PSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCK 282

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +  +E ++++   M+E+G  P   T+N M   LC+ Q +  A ++   M  +   P    
Sbjct: 283 AGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGAT 342

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI  L K G+  +A+R    M+    +P++V Y++ I       R +   ++++++ 
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             GC PD++  N  +  + KA    +   LF E+  +G +P   +Y++LI+   K+G   
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG-FA 461

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +    L   ++ +    D   Y T+IDG C +G+ + A  L  EM+  G  P  +T+ ++
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + GL K DR   A + F   K  G++ +  ++ +LI  F        A+ V++EM
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 183/663 (27%), Positives = 308/663 (46%), Gaps = 45/663 (6%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           ++ QDV+    +M+      L+  L    ++ E   L++++   G+   ++++ + ++ A
Sbjct: 216 MICQDVIPWVPYMN-----ILLTALVRRNMIGELRDLYNKMVLRGI-YGDHFTVHVMVRA 269

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-D 134
             K   V+  E   +E ++ G   D    + ++Q  C     +  L +  E+ + GWV  
Sbjct: 270 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 329

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E  F+ ++VA    G + +A  L E M +C   +N      L+ G+  +  +D AL LF+
Sbjct: 330 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 389

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           K+T+ G   +   Y V+I G C +  +E A +LY++MK +GI P    ++ L+       
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG----- 444

Query: 255 ELTLLVKEIWEDRD-----------VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
               L   +WE+              N  T   N +M  L   G +D+A +LL  M+   
Sbjct: 445 ---YLKAPLWEEASKLFDEAVDCGVANIFTY--NIMMSWLCKGGKMDEACSLLDNMVN-- 497

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +G V PN  S++ +I    + G +D+A S+F +M       NV  Y+
Sbjct: 498 -------------QGMV-PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 543

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LIDG       E++ +L  +M      PT FT N++   LC+   +  A + ++    +
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       ++    K G    A     +M + G  P++V Y++ I G     R+DLA
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L+   ++   G   DV AY+ +I G CK + +  A+DLF E++  GL P+   YN +I+G
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +    N++ A++   +M+       D+ TYTTLIDGL   GR   A  L+ EM  KG  P
Sbjct: 724 FRDLNNMEAALVWYKKMINDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           + ITF  L+ GLC   +   A      M  K M P + ++  LI+ +  E N   AF + 
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 842

Query: 664 KEM 666
            EM
Sbjct: 843 DEM 845



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 165/560 (29%), Positives = 265/560 (47%), Gaps = 58/560 (10%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEV 151
           + +  D      LL  Y  + + + A+  FN +I      WV     +ILL A  +   +
Sbjct: 184 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVP--YMNILLTALVRRNMI 241

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +  +L  +M    I  +  T  V++   +K+ RV++A + F +  + G   DA  Y +I
Sbjct: 242 GELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSII 301

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I  +CK     + L+L  EMK  G  P     + +I +C                     
Sbjct: 302 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVAC--------------------- 340

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                       V+ G++ +A  L + MI  G+P+  V    LM  KG  +         
Sbjct: 341 ------------VAQGNMVEALRLKEEMINCGKPMNLVVATSLM--KGYCA--------- 377

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
                  G LD AL+LF ++T+ G   N   Y+ LI+G CNS  +E++ EL  +M+ +G 
Sbjct: 378 ------QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P+ F +NS+ R   +      A  L  +    G      +N +++  LCK GK  EA  
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYN-IMMSWLCKGGKMDEACS 490

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +MV +G +P++V Y+  I G      +D+A  +F D+ A    P+VV Y+I+I G  
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K     +A DLF++M++  + P+  T+N +ING CK G + +A   L   LE E   P  
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE-EGFIPSC 609

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY +++DG    G  D A+ ++ EM E G +PN +T+ +LI G CK +R   AL     
Sbjct: 610 MTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDE 669

Query: 631 MKEKGMKPDMFVFVALISAF 650
           M+EKG++ D+  + ALI  F
Sbjct: 670 MREKGLELDVTAYSALIDGF 689



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           F+  H   N +     R   +  A++    M  Q   PWV +  +L+  L +     E  
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                MV  G   D       +   +   RV+ A E FR+    G   D  AY+III  +
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 305

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP- 568
           CK        +L  EM  +G +PS AT+  +I      GN+ +A+     M+    G P 
Sbjct: 306 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI--NCGKPM 363

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +++  T+L+ G C  G  D A+ L+N++ E G  PN++T+  LI G C       A   +
Sbjct: 364 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 423

Query: 629 RMMKEKGMKPDMFVFVALISAFL 651
             MK  G+ P +F   +L+  +L
Sbjct: 424 TQMKLNGIPPSVFNVNSLLRGYL 446


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/622 (27%), Positives = 296/622 (47%), Gaps = 33/622 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R+     ++ + +D+  SRC M       LI       L +E   + D +  E    P
Sbjct: 93  LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + + YN +L  L    S+ LVE+   +M  +G   D  T   L++  C + Q   A+ + 
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++  +G V DE  F+ ++  + + G++D A  + E+M +     +  +  V++HGF K+
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272

Query: 184 SRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            RV+ AL    +M+ + GF  D   ++ ++ GLCK   ++ A+++   M   G  PD   
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + +I+     GE+   V+ + +   RD +  T+  N+++  L     +++A  L + + 
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG + P+  +F+ +I  L       +A+ LF EM   GC  + F
Sbjct: 393 S---------------KGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LID LC+  +L+E+  +L++ME SG   +  T N++    C+      A  +  +M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496

Query: 421 RVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI-----GGL 474
            V G     V +NTL I  LCK  +  +A + +  M+ EG  PD   Y++ +     GG 
Sbjct: 497 EVHGVSRNSVTYNTL-IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG- 554

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
            DIK+   A ++ + + ++GC PD+V Y  +ISGLCKA RV  A  L   +  KG+  + 
Sbjct: 555 -DIKK---AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLW 593
             YN +I G  +     +A+     MLE+    PD ++Y  +  GLC  G P  +A+   
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670

Query: 594 NEMEEKGCAPNRITFMALITGL 615
            E+ EKG  P   +   L  GL
Sbjct: 671 VELLEKGFVPEFSSLYMLAEGL 692



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 248/571 (43%), Gaps = 60/571 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD-- 194
           ++  +L+   + G  D   +++E M      +   TF +LI  + +    D+ L + D  
Sbjct: 85  LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144

Query: 195 ----------------------------------KMTKSGFASDAAMYDVIIGGLCKNKQ 220
                                             KM+  G   D + ++V+I  LC+  Q
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L  A+ +  +M   G+ PD +  + ++    +EG+L   L ++E   +   +   +  N 
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+      G ++ A N +Q M   +                  P+  +F+ ++N L K G
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFF---------------PDQYTFNTLVNGLCKAG 309

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  A+ +   M Q G   +V+ YN++I GLC    ++E+ E+L +M      P   T N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC---KHGKAMEAFRFLTDM 455
           ++   LC+   V  A  L R +  +G  P V     LI+ LC    H  AME F    +M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE---EM 426

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             +G  PD   Y+  I  L    ++D AL + + +   GC   V+ YN +I G CKA + 
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EAE++F+EM   G+  +  TYN LI+G CKS  ++ A   + +M+  E   PD  TY +
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGQKPDKYTYNS 545

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+   C  G    A  +   M   GC P+ +T+  LI+GLCK  R   A    R ++ KG
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +      +  +I     +     A  + +EM
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREM 636



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 167/648 (25%), Positives = 286/648 (44%), Gaps = 69/648 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF+   ++    P    Y  +L  L +S S D ++  L++M+         T   L++ Y
Sbjct: 69  LFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY 128

Query: 112 CNSGQFDKALSVFNEIID------------------------------HG----W---VD 134
                 D+ LSV + +ID                              H     W    D
Sbjct: 129 AQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPD 188

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
              F++L+ A  +  ++  A  ++E M    +  +EKTF  ++ G++++  +D AL++ +
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSDE 253
           +M + G +      +VI+ G CK  ++E AL    EM    G  PD    + L+      
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 254 GE-------LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           G        + ++++E + D DV T     NS++  L   G + +A  +L  MI  +   
Sbjct: 309 GHVKHAIEIMDVMLQEGY-DPDVYTY----NSVISGLCKLGEVKEAVEVLDQMITRD--- 360

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                         SPNT +++ +I+TL K+ +++ A  L R +T  G + +V  +N+LI
Sbjct: 361 -------------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            GLC +     + EL  EM   G +P  FT N +   LC +  +  ALN++++M + G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
             V     LI   CK  K  EA     +M   G   + V Y+  I GL   +RV+ A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              +   G  PD   YN +++  C+   + +A D+   M + G  P + TY  LI+G CK
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNR 605
           +G ++ A   L R ++ +  +     Y  +I GL    +  +AI L+ EM E+    P+ 
Sbjct: 588 AGRVEVASKLL-RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646

Query: 606 ITFMALITGLCKCDRP-RAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +++  +  GLC    P R A+     + EKG  P+      L    L+
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 222/467 (47%), Gaps = 22/467 (4%)

Query: 189 ALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI---TPDFEILS 244
           AL+LF+  +K   F+ + A+Y+ I+  L ++   +   ++  +MK S     T  F IL 
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           +       + E+  +V  + ++  +   T   N ++ +LV   S+               
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK-------------- 171

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           + ++    + ++   + P+ S+F+++I  L +  +L  A+ +  +M   G + +   +  
Sbjct: 172 LVEISHAKMSVWG--IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ- 423
           ++ G      L+ +  +  +M E G   ++ ++N +    C+   V  ALN +++M  Q 
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       L+  LCK G    A   +  M+QEG+ PD+  Y++ I GL  +  V  A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +E+   +    C P+ V YN +IS LCK  +V EA +L   + +KG++P V T+N LI G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C + N   AM     M  K    PD  TY  LID LC  G+ D+A+ +  +ME  GCA 
Sbjct: 410 LCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + IT+  LI G CK ++ R A   F  M+  G+  +   +  LI   
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 13/357 (3%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K   SP  + ++ I+  L + G  D    +  +M    C      +  LI+        +
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135

Query: 377 ESYELLREM-EESGFKP-THFTLNSMFRCLCRRQDVVGALNLVR----KMRVQGHEPWVK 430
           E   ++  M +E G KP THF  N M   L        +L LV     KM V G +P V 
Sbjct: 136 EILSVVDWMIDEFGLKPDTHF-YNRMLNLLVDGN----SLKLVEISHAKMSVWGIKPDVS 190

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +LIK LC+  +   A   L DM   G +PD   ++  + G I+   +D AL +   +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGN 549
              GC    V+ N+I+ G CK  RV +A +   EM  + G  P   T+N L+NG CK+G+
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +  A+  +  ML+ E   PDV TY ++I GLC  G   +A+ + ++M  + C+PN +T+ 
Sbjct: 311 VKHAIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI+ LCK ++   A    R++  KG+ PD+  F +LI       N  +A E+ +EM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 176/624 (28%), Positives = 294/624 (47%), Gaps = 27/624 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN LL  + ++   D +E  L+EM   G+G        L+     S +  +A  +   +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +      ++IL+ A S+  E D    L  +M +    +N   F  LI  F ++ RV
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEIL 243
           D AL L D+M  +   +D  +Y+V I    K  +++M+ + + EMK  G+ PD   +  +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
             ++   +   E   L +++ ++R V       N+++    S G  D+AY LL+      
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKV-PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 304 PIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            I  V                 E L IF   K    PN  +++I+I+ L ++GKL+ AL 
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  +M + G   NV   N +ID LC + +LEE+  +   M++    P   T +S+   L 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A +L  KM   GH P     T LI+   K G+  +  +   +MV  G  PD+ 
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  +  +      +    LFR+I AHG  PD  +Y+I+I GL KA    E  +LF  M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G +     YN +I+G+CKSG +++A   L  M  K    P V+TY ++IDGL    R
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK-GHPPTVVTYGSVIDGLAKIDR 664

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A ML+ E +  G   N + + +LI G  K  R   A +    + +KG+ P+++ +  
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724

Query: 646 LISAFLS--ELNPPL-AFEVLKEM 666
           L+ A +   E+N  L  F+ +K++
Sbjct: 725 LLDALVKAEEINEALICFQSMKDL 748



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/664 (25%), Positives = 313/664 (47%), Gaps = 22/664 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS  R   P+ +L   + +    ++      LIR     G V+ A  L D++K   L   
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDA- 263

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   YN  ++   K+  VD+      EM+ +G   D  T T ++ V C + + D+A+ +F
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELF 323

Query: 125 NEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++  +  V   + ++ +++ +   G+ D+A  L+ER        +   +  ++    KK
Sbjct: 324 EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKK 383

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RV++AL++F++M +     +   Y+++I  LC+  +L  AL++  +M+ +G+ P+   +
Sbjct: 384 RRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442

Query: 244 SKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + +I   C  +  E    + E  +D+      +  +S++  L   G +D AY+L + M+ 
Sbjct: 443 NIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML- 501

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                D G            P    +  +I +  K G+ +    +++EM   GC  ++ L
Sbjct: 502 -----DCGH----------VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 546

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
            N  +D +  +   E+   L RE+   GF P   + + +   L +         L   M+
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG          +I   CK GK  +A++ L +M  +G  P +V Y + I GL  I R+D
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  LF +  ++G   +VV Y+ +I G  K  R+ EA  +  E++ KGL P+V T+N L+
Sbjct: 667 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 726

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +   K+  I++A++C   M + +   P+ ITY+ LI+GLC   + + A + W EM++ G 
Sbjct: 727 DALVKAEEINEALICFQSMKDLKC-PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGL 785

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            PN IT+  +I+GL K      A   F   K  G  PD   + A+I    S      A+ 
Sbjct: 786 KPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 845

Query: 662 VLKE 665
           + +E
Sbjct: 846 LFEE 849



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 293/635 (46%), Gaps = 55/635 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M  +L +A R+     L + + ++R      A   +I   GS G  +EA  L ++ K +G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQVYCNSGQFDK 119
             +P+  +YNC+L  L K   V+      +EM+ D       Y +  L+ + C  G+ + 
Sbjct: 366 -SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNI--LIDMLCREGKLNA 422

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           AL + +++   G + +    +I++    K  ++++AC + E MDD     N  TF  LI 
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  K  RVD A  L++KM   G    A +Y  +I    K  + E   ++Y EM  +G +P
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 542

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  +++  +      GE                 T    ++ R + ++G I         
Sbjct: 543 DLTLINTYMDCVFKAGE-----------------TEKGRALFREINAHGFI--------- 576

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                                  P+  S+ I+I+ L+K G  +    LF  M + GC+ +
Sbjct: 577 -----------------------PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLD 613

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              YN +IDG C S ++ ++Y+LL EM+  G  PT  T  S+   L +   +  A  L  
Sbjct: 614 THAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 673

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           + +  G +  V   + LI    K G+  EA+  + +++Q+G  P++  ++  +  L+  +
Sbjct: 674 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 733

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ AL  F+ +    C P+ + Y+I+I+GLC+ ++  +A   + EM   GL P+  TY 
Sbjct: 734 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 793

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +I+G  K+GNI +A    SR  +   G PD  +Y  +I+GL  A +  DA  L+ E   
Sbjct: 794 TMISGLAKAGNILEASGLFSR-FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 852

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           KGC  +  T + L+  L K +    A +   ++KE
Sbjct: 853 KGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/605 (28%), Positives = 283/605 (46%), Gaps = 37/605 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            PN  +YN ++  LCK+         LKEM+D      D  T + ++  +C  G+ D+A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 122 SVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +  E++  D    D   ++ ++    + G++D+ACE++  M    +  ++ TF  LI G
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK---GSGI 236
           +    +VD+AL+L+ ++  S    DA     +I GLC+ +++  A +L+ EM+       
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185

Query: 237 TPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            PD    + LI      G L   +K   + E R      +  +S++  L   G +DQA +
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L + M                 KG V PN  ++  +I+ L    K+D A  L  EMT   
Sbjct: 246 LFRRMTS---------------KGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 289

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +   YN L+DG C   R+EE+ +L +EM      P   T   + R  C    +  A 
Sbjct: 290 CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEAR 349

Query: 415 NLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            L+  M+   G +P V   ++++    +  + +EA  F+ +M+     P+ V YS+ I G
Sbjct: 350 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 409

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L    RV+ A+E+ +++      PDVV Y I+I GLC   R  EA  L  EM+ K + PS
Sbjct: 410 LCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPS 465

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V T+N +I   C+ G++D+A   L  M       P ++TYTTL++G    GR + A  L+
Sbjct: 466 VGTFNSVIGALCRLGDMDEAWKLLVAM-AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF 524

Query: 594 NEMEEKG----CAPNRI---TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             M  K      A N +    F ALI GLCK      A+     ++ +  +P     +A+
Sbjct: 525 EVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAI 584

Query: 647 ISAFL 651
           +   L
Sbjct: 585 VDGLL 589



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 263/543 (48%), Gaps = 33/543 (6%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           +E  +++++    K     KA E+++ M D  ++  +  T+  +I+GF K+  +D+A ++
Sbjct: 8   NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67

Query: 193 FDKM-TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-C 250
             +M T+ G A D   Y  ++ GLC++ +++ A ++  EMK  G+ PD    S LIT  C
Sbjct: 68  LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127

Query: 251 SDE--GELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +     E   L KEI       D  + + L   + R       I +AY L Q        
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCR----ERRIGEAYELFQ-------- 175

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                EM M   G   P+  ++  +I+   K G L+ A+ +   M    C+ NV  Y++L
Sbjct: 176 -----EMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL 230

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG- 424
           + GLC +  L+++ +L R M   G  P   T  ++   LC    V  A  L+ +M     
Sbjct: 231 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 290

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
               V +N LL    C+ G+  EA +   +M  +  LPD + Y+  + G  +  R++ A 
Sbjct: 291 PADTVSYNALL-DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEAR 349

Query: 485 ELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            L  ++  A G  PDVV Y+I+++G  +A+R  EA +   EMI + + P+  TY+ LI+G
Sbjct: 350 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 409

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK+G ++ AM  L     K    PDV+TYT +I+GLC   R ++A+ L  EM  K   P
Sbjct: 410 LCKAGRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEP 464

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +  TF ++I  LC+      A      M   G++P M  +  L+  F       +A+E+ 
Sbjct: 465 SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF 524

Query: 664 KEM 666
           + M
Sbjct: 525 EVM 527



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 223/473 (47%), Gaps = 29/473 (6%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILSKLITSCSDEGELTL-- 258
           A +   Y+V++ GLCK +    A ++  EM+ G  + PD    S +I     +GE+    
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 259 -LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIF 316
            +++E+     +    +   S++  L  +G +D+A  +++ M +KG              
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG-------------- 111

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              V P+  +F  +I       K+D AL L++E+    C  +    + LI GLC   R+ 
Sbjct: 112 ---VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIG 168

Query: 377 ESYELLREME---ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           E+YEL +EME   +  +KP   T  ++    C+  ++  A+ ++  M  +   P V   +
Sbjct: 169 EAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 228

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            L+  LCK G   +A      M  +G +P++V Y+  I GL    +VD A  L  ++ A 
Sbjct: 229 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 288

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C  D V+YN ++ G C+  R+ EA+ LF EM  K  +P   TY  L+ G+C +  +++A
Sbjct: 289 CCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L  M       PDV+TY+ ++ G   A R  +A     EM  +  APN +T+ +LI 
Sbjct: 349 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 408

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLCK  R   A+   + +     KPD+  +  +I           A  +L+EM
Sbjct: 409 GLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEM 457



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 187/388 (48%), Gaps = 42/388 (10%)

Query: 320 VSPNTSSFDIIINTL---------------LKDGK---------------------LDLA 343
           V+PN  ++++++N L               ++DGK                     +D A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 344 LSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
             + REM T+ G   +V  Y +++DGLC   +++ + E++REM+  G +P  FT +++  
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE---G 459
             C  + V  AL L +++           ++ LI  LC+  +  EA+    +M       
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           + PD+V Y+A I G      ++ A+++   +    C P+VV Y+ ++ GLCKA  + +A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DLF  M +KG +P+V TY  LI+G C +  +D A L +  M        D ++Y  L+DG
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT-CCPADTVSYNALLDG 303

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK-EKGMKP 638
            C  GR ++A  L+ EM  K C P+RIT+  L+ G C   R   A      MK   G+ P
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 363

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D+  +  +++ +        A E ++EM
Sbjct: 364 DVVTYSIVVAGYSRAKRFVEAAEFIQEM 391



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 223/504 (44%), Gaps = 45/504 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ---DYGWGYDKY 102
           V+EA  L+ ++     C  +  S + L+  LC+   +       +EM+   D  W  D  
Sbjct: 132 VDEALKLYKEILTSS-CRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T T L+  +C SG  +KA+ +   +     V   V +S LL    K G++D+A +L  RM
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                  N  T+  LIHG     +VD A  L D+MT +   +D   Y+ ++ G C+  ++
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 222 EMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTL 274
           E A QL+ EM      PD   +  L +   + S   E   L++ +      D DV T ++
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           +     R         +A   +Q MI                   V+PN  ++  +I+ L
Sbjct: 371 VVAGYSRA----KRFVEAAEFIQEMI----------------ARNVAPNAVTYSSLIDGL 410

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+++ A+ + + + +     +V  Y  +I+GLC ++R EE+  LL EM     +P+ 
Sbjct: 411 CKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T NS+   LCR  D+  A  L+  M   G EP +   T L++   + G+   A+     
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526

Query: 455 MVQEG--------FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           M ++          +P+   +SA I GL   + +D A+ +  ++ +  C P       I+
Sbjct: 527 MRRKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 585

Query: 507 SGLCKAQRVAEAEDLFNEMITKGL 530
            GL +A R  EA  L N +   GL
Sbjct: 586 DGLLRAGRTEEAGKLINSISKVGL 609



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 116/279 (41%), Gaps = 49/279 (17%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL----- 61
           R  RI   + L +++    C         L+R   +   +EEA  L + +K         
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 62  ------------------------------CVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
                                           PN  +Y+ L++ LCK+  V+     LK 
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWG 149
           +       D  T T +++  C + + ++AL++  E+++   V+  V  F+ ++ A  + G
Sbjct: 426 VDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK-RVEPSVGTFNSVIGALCRLG 480

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA--- 206
           ++D+A +L+  M    +     T+  L+ GF +  R++ A +LF+ M +    S +A   
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540

Query: 207 ----MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
                +  +I GLCK ++++ A+ +  E++     P  E
Sbjct: 541 VPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE-KGCAPNRITFMALITGLCK-CDR 620
           +E  +P+  TY  +++GLC A     A  +  EM + K  AP+ +T+  +I G CK  + 
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            RA  +   M+   GM PD+  + +++     +     A E+++EM
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/630 (27%), Positives = 306/630 (48%), Gaps = 48/630 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++   ++  +D   +  +EM  Y +  D+YTL+      C  G+  +A  +
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268

Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E  D  +V + VF   +V+   +    ++A +++ RM   +   N  T+ +L+ G ++
Sbjct: 269 IDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++   M   G   +  +++ +I   CK++    A +L+ +M   G  P + +
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386

Query: 243 LSKLITS-CSDEGE-----LTLLVKEIWEDRDVNTMTLLCN--SIMRILVSNGSIDQAYN 294
            +  I S CS+E +     L L+ K   E  D+  +    N  +  R L   G  DQA+ 
Sbjct: 387 YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFK 446

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++  M+                KG V P+ S++  +I  L    K++ A SLF EM + G
Sbjct: 447 IICEMMG---------------KGFV-PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNG 490

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  LID  C +  ++++ +   EM   G  P   T  ++     + + +  A 
Sbjct: 491 IVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVAD 550

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL---------TDMVQ-------- 457
            L   M ++G +P V   T LI   CK G+  +A +           +DM +        
Sbjct: 551 ELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNN 610

Query: 458 -EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            EG  P+++ Y A + GL    RV  A EL   + AHGC P+ + Y+ +I G CK  ++ 
Sbjct: 611 CEG--PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQ 668

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A+++F +M  +G  P++ TY+  I+   K   +D  +  LS+MLE  S +P+V+ YT +
Sbjct: 669 DAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN-SCTPNVVIYTEM 727

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +DGLC  G+ D+A  L  +MEEKGC PN +T+ A+I G  K  +    L  FR M  KG 
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            P+   +  LI+   S      A+++L EM
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 179/715 (25%), Positives = 310/715 (43%), Gaps = 102/715 (14%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R +RI  +      ++   C+ +      LI           A  LF ++ + G C P
Sbjct: 330 LGRCKRILSM------MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG-CQP 382

Query: 65  NNYSYNCLLEALCK------SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
               YN  + ++C       S  +DLVE    EM D G   +K  ++   +  C +G+FD
Sbjct: 383 GYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFD 442

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           +A  +  E++  G+V D+  +S ++       +V+KA  L E M    I  +  T+ +LI
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILI 502

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             F K   + +A + FD+M   G   +   Y  +I    K KQ+ +A +L+  M   G  
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P+    + LI      G++     +I+             + MR  + +  +D+ + L  
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKAC-QIY-------------ARMRGDIESSDMDKYFKLDH 608

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
              +G                   PN  ++  +++ L K  ++  A  L   M   GC  
Sbjct: 609 NNCEG-------------------PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEP 649

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N  +Y+ +IDG C   +L+++ E+  +M E G+ P  +T +S   CL +   +   L ++
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL 709

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM      P V   T ++  LCK GK  EA++ +  M ++G  P++V Y+A I G    
Sbjct: 710 SKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKS 769

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------------ 525
            +++  LELFRD+C+ GC P+ + Y ++I+  C    + EA  L +EM            
Sbjct: 770 GKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSH 829

Query: 526 --ITKGL-------------------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
             I +G                    +P  + Y +LI+ + K+G ++ A+     +LE+ 
Sbjct: 830 RKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL----DLLEEI 885

Query: 565 SGSP-----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           S SP     +   Y +LI+ L  A + D A+ L+  M  K   P     + LI GL K D
Sbjct: 886 SSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVD 945

Query: 620 RPRAAL----------VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           + + AL          +H+   K  G   +M   V L+ A + E    ++ E+L+
Sbjct: 946 KWQEALQLSDSICQMDIHWLQEKATGRTEEM---VKLVIAAMVEAETGVSEEILE 997



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 161/661 (24%), Positives = 282/661 (42%), Gaps = 122/661 (18%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+   C++   ++    L  ++D+G+   + T   L+QV+  + + D A  V  E++ 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           + +V D +  S    +  K G+  +A +LI+  +D                         
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED------------------------- 274

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
                       F  D   Y+ ++ GLC+    E A+ +   M+ S   P+      L++
Sbjct: 275 ------------FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLS 322

Query: 249 SCSDEGEL-------TLLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            C  +G+L       ++++ E  + +R++       NS++     +     AY L + MI
Sbjct: 323 GCLRKGQLGRCKRILSMMITEGCYPNREI------FNSLIHAYCKSRDYSYAYKLFKKMI 376

Query: 301 KG--EPIADVGVEMLMIFKGTVSPN--TSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           K   +P    G  +  IF G+V  N    S DI          LDL    + EM  +G +
Sbjct: 377 KCGCQP----GYLVYNIFIGSVCSNEEQPSSDI----------LDLVEKAYSEMLDLGVV 422

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N    +N    LC + + +++++++ EM   GF P   T + +   LC    V  A +L
Sbjct: 423 LNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSL 482

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M+  G  P V   T+LI   CK G   +A ++  +M+ +G  P++V Y+A I   + 
Sbjct: 483 FEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLK 542

Query: 477 IKRVDLALELFRDICAHGCCPDVVAY---------------------------------- 502
            K++ +A ELF  +   GC P+VV Y                                  
Sbjct: 543 AKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDK 602

Query: 503 ------------NII-----ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
                       N+I     + GLCKA RV EA +L + M+  G  P+   Y+ +I+G+C
Sbjct: 603 YFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC 662

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G +  A    ++M E+   SP++ TY++ ID L    R D  + + ++M E  C PN 
Sbjct: 663 KIGKLQDAQEVFTKMSER-GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 721

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           + +  ++ GLCK  +   A      M+EKG  P++  + A+I  F          E+ ++
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRD 781

Query: 666 M 666
           M
Sbjct: 782 M 782



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 142/590 (24%), Positives = 262/590 (44%), Gaps = 61/590 (10%)

Query: 46   VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            VE+A  LF+++KR G+ VP+ Y+Y  L+++ CK+  +        EM   G   +  T T
Sbjct: 476  VEKAFSLFEEMKRNGI-VPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYT 534

Query: 106  PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD-- 162
             L+  Y  + Q   A  +F  ++  G     V ++ L+    K G+++KAC++  RM   
Sbjct: 535  ALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD 594

Query: 163  ------DCNIRLNEK--------TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                  D   +L+          T+  L+ G  K +RV +A +L D M   G   +  +Y
Sbjct: 595  IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654

Query: 209  DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
            D +I G CK  +L+ A +++++M   G +P+    S  I     +  L L++K + +  +
Sbjct: 655  DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714

Query: 267  RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                   ++   ++  L   G  D+AY L                ML + +   +PN  +
Sbjct: 715  NSCTPNVVIYTEMVDGLCKIGKTDEAYKL----------------MLKMEEKGCNPNVVT 758

Query: 327  FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +  +I+   K GK++  L LFR+M   GC  N   Y  LI+  C++  L+E+Y+LL EM+
Sbjct: 759  YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 387  ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            ++ + P H  L+         Q+ + ++ L+ ++      P      +LI    K G+  
Sbjct: 819  QT-YWPKHI-LSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 447  EAFRFLTDMVQE--GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             A   L ++       + +   Y++ I  L    +VD ALEL+  + +    P++     
Sbjct: 877  VALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVH 936

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK---SGNIDQAM-LCLSRM 560
            +I GL K  +  EA  L + +    +             W +   +G  ++ + L ++ M
Sbjct: 937  LIKGLIKVDKWQEALQLSDSICQMDI------------HWLQEKATGRTEEMVKLVIAAM 984

Query: 561  LEKESGSPDVI-----TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
            +E E+G  + I     +Y+  +  LC  G P    ++ +    +G A  R
Sbjct: 985  VEAETGVSEEILERCSSYSINVRILCFFGPPIHHYIMQHANRSQGRAWQR 1034


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 246/481 (51%), Gaps = 18/481 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F +++ A     EVD A  ++  M       N   +  LIH   K +RV++ALQL ++M
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   DA  ++ +I GLCK  ++  A ++ + M   G TPD      L+      G +
Sbjct: 273 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV 332

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
               K+++  R     +++ N+++   V++G +D A  +L  M+    I           
Sbjct: 333 DA-AKDLFY-RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV---------- 380

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++ +I    K G + LAL + R+M   GC  NV+ Y  L+DG C   +++
Sbjct: 381 -----PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKID 435

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+Y LL EM   G KP     N +    C+   +  A+ + R+M  +G +P V     LI
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC+  +   A   L DM+ EG + + V Y+  I   +    +  A +L  ++   G  
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D + YN +I GLC+A  V +A  LF +M+  GL+PS  + N+LING C+SG +++A+  
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEF 615

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
              M+ + S +PD++T+ +LI+GLC AGR +D + ++ +++ +G  P+ +T+  L++ LC
Sbjct: 616 QKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674

Query: 617 K 617
           K
Sbjct: 675 K 675



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 260/552 (47%), Gaps = 59/552 (10%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L +V  V+ A  +   + + G CVPN+  Y  L+ +L K   V+     L+E
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEE 271

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T   ++   C   + ++A  + N ++  G+  D+  +  L+    K G 
Sbjct: 272 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGR 331

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
           VD A +L  R+     +     F  LIHGFV   R+D A   L D +T  G   D   Y+
Sbjct: 332 VDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I G  K   + +AL++  +M+  G  P+                             V
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPN-----------------------------V 418

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            + T+L +   ++    G ID+AYNLL  M      AD            + PNT  F+ 
Sbjct: 419 YSYTILVDGFCKL----GKIDEAYNLLNEMS-----AD-----------GLKPNTVGFNC 458

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+   K+ ++  A+ +FREM + GC  +V+ +N+LI GLC  + ++ +  LLR+M   G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEA 448
                 T N++     RR ++  A  LV +M  QG     + +N+L IK LC+ G+  +A
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSL-IKGLCRAGEVDKA 577

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M+++G +P  +  +  I GL     V+ A+E  +++   G  PD+V +N +I+G
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 637

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC+A R+ +   +F ++  +G+ P   TYN L++  CK G +  A L L   +E +   P
Sbjct: 638 LCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIE-DGFVP 696

Query: 569 DVITYTTLIDGL 580
           +  T++ L+  L
Sbjct: 697 NDRTWSILLQSL 708



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 227/486 (46%), Gaps = 26/486 (5%)

Query: 186 VDKALQLFD-KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           V  +++LF    ++ G+     +Y V+IG L  N + +   +L  +MK  GI     +  
Sbjct: 85  VSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFI 144

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLL---CNSIMRILVSNGSIDQAYNLLQAMIK 301
            ++      G      + + E R+V +        N ++ ILVS      A N+   M+ 
Sbjct: 145 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 204

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            +                + P   +F +++  L    ++D ALS+ R+MT+ GC+ N  +
Sbjct: 205 RK----------------IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVI 248

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  LI  L   NR+ E+ +LL EM   G  P   T N +   LC+   +  A  +V +M 
Sbjct: 249 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 308

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G  P       L+  LCK G+   A     D+      P  V ++  I G +   R+D
Sbjct: 309 IRGFTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIHGFVTHGRLD 364

Query: 482 LALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            A  +  D + ++G  PDV  YN +I G  K   V  A ++  +M  KG  P+V +Y +L
Sbjct: 365 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++G+CK G ID+A   L+ M   +   P+ + +  LI   C   R  +A+ ++ EM  KG
Sbjct: 425 VDGFCKLGKIDEAYNLLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C P+  TF +LI+GLC+ D  + AL   R M  +G+  +   +  LI+AFL       A 
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543

Query: 661 EVLKEM 666
           +++ EM
Sbjct: 544 KLVNEM 549



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R   I   R L  ++V     +       LI+ L   G V++A  LF+++ R+GL VP++
Sbjct: 535 RRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL-VPSS 593

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            S N L+  LC+S  V+      KEM   G   D  T   L+   C +G+ +  L++F +
Sbjct: 594 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 653

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G   + V ++ L+    K G V  AC L++   +     N++T+ +L+   V +  
Sbjct: 654 LQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQET 713

Query: 186 VDK 188
           +D+
Sbjct: 714 LDR 716



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 2/150 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L RA  +   R L + +++     S  +   LI  L   G+VEEA     ++   G   P
Sbjct: 568 LCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG-STP 626

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  ++N L+  LC++  ++      +++Q  G   D  T   L+   C  G    A  + 
Sbjct: 627 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLL 686

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
           +E I+ G+V ++  +SILL +      +D+
Sbjct: 687 DEGIEDGFVPNDRTWSILLQSLVPQETLDR 716


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/651 (27%), Positives = 301/651 (46%), Gaps = 32/651 (4%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           R  +SP      +R L    + E    L+ Q+ +EGL +P+  +YN ++ A CK  S+ +
Sbjct: 143 RLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGL-LPDTVTYNTMIMAYCKEGSLAI 201

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLV 143
                + +++ G   D YT   LL  YC +G   KA  +   +   G   +E+ ++IL+ 
Sbjct: 202 AHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQ 261

Query: 144 AFSKWGEVDKACELIERM--DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
              +   V +A  L+  M  D C+  L+  T+ +LI G  K+ R+  A  L D+M + G 
Sbjct: 262 GLCETRCVREALVLLLMMLQDGCSPNLH--TYTLLIRGLCKEGRIHDARVLLDEMPRRGV 319

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC----SDEGELT 257
                 Y+ +I G CK+ +L+ AL + + M+G+G  PD    + LI        DE E  
Sbjct: 320 VPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAE-E 378

Query: 258 LLVKEIWE--DRDVNTMTLLCNS------------IMRILVSNG-SID-QAYN-LLQAMI 300
           LL   I       V T T + N             +  I++S+   +D QAY  L+  +I
Sbjct: 379 LLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLI 438

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K   + +    +  IF   +SPN   +  II+   K GK+  AL +F+     GC  N +
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y++LI GL    +L ++  L+ +M+E G  P   T  ++ +  C++ +   A  L   M
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 558

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P  +   +L   LCK G+A EA+ FL   V++G +   V Y++ + G       
Sbjct: 559 EQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNT 615

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + A  L   +   GC  D   Y++++  LCK +++ EA  + ++M  +G+  ++  Y ++
Sbjct: 616 EFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTII 675

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+   K G  D A    + M+      P  ITYT  I   C  GR ++A  L  EME  G
Sbjct: 676 ISEMIKEGKHDHAKSMFNEMIS-SGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            AP+ +T+   I G         A    + M +   +P+ + +  L+  FL
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFL 785



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 169/641 (26%), Positives = 275/641 (42%), Gaps = 41/641 (6%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +  +   LI+ L     V EA +L   + ++G C PN ++Y  L+  LCK   +   
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDG-CSPNLHTYTLLIRGLCKEGRIHDA 307

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
            + L EM   G     +T   ++  YC SG+   AL +   +  +G   D+  ++ L+  
Sbjct: 308 RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG 367

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G+ D+A EL+             TF  +I+G+ K  ++D AL++   M  S    D
Sbjct: 368 LCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD 426

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
              Y V+I  L K  +L+ A    +E+  +G++P+  I + +I +    G++   L V +
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           + E           +S++  L+ +  + +A  L+  M +                  ++P
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED----------------GITP 530

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
              ++  +I    K  + D A  LF  M Q G   +   YN L D LC S R EE+Y  L
Sbjct: 531 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 590

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
               + G   T  T  S+     +  +   A  L+ KM  +G +      ++L++ LCK 
Sbjct: 591 ---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQ 647

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  EA   L  M   G   +IV Y+  I  +I   + D A  +F ++ + G  P  + Y
Sbjct: 648 KKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITY 707

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            + IS  CK  R+ EA  L  EM   G+ P V TYN+ ING    G +D A   L RM++
Sbjct: 708 TVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMID 767

Query: 563 KESGSPDVITYTTLIDGLCIAGRPD----DAIMLWN------------EMEEKGCAPNRI 606
             S  P+  TY  L+         +    D   +WN             M + G  P  +
Sbjct: 768 A-SCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           T+ ++I G CK  R   A V    M  K + P+  ++  LI
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 165/679 (24%), Positives = 271/679 (39%), Gaps = 108/679 (15%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGL--------------------------------- 61
            LIR L   G + +A +L D++ R G+                                 
Sbjct: 293 LLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN 352

Query: 62  -CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P++++YN L+  LC     D  E  L      G+     T T ++  YC + + D A
Sbjct: 353 GCNPDDWTYNSLIHGLCGG-KPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDA 411

Query: 121 LSV-----------------------------------FNEIIDHGWVDEHV-FSILLVA 144
           L V                                    NEI  +G     V ++ ++ A
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + K G+V  A E+ +  +    R N  T+  LI+G ++  ++ KA+ L  KM + G    
Sbjct: 472 YCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 531

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILS-KLITSCSDEGELTLLV 260
              Y  +I G CK  + + A +L+  M+ +G+TPD   + +L+  L  S   E   + LV
Sbjct: 532 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 591

Query: 261 KEIWEDRDVNTMTLL-----------CNSIMRILVSNGSIDQAYN---LLQAMIKGEPIA 306
           K+      V   +L+             +++  +V+ G    ++    LLQA+ K + + 
Sbjct: 592 KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLN 651

Query: 307 D-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
           + + +   M  +G V  N  ++ III+ ++K+GK D A S+F EM   G   +   Y   
Sbjct: 652 EALSILDQMTLRG-VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVF 710

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I   C   R+EE+  L+ EME +G  P   T N           +  A + +++M     
Sbjct: 711 ISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASC 770

Query: 426 EPWVKHNTLLIKELCKHGKAMEAF----------------RFLTDMVQEGFLPDIVCYSA 469
           EP      LL+K   K   A   +                + L  MV+ G  P  V YS+
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G     R++ A  L   +      P+   Y ++I   C  +   +A      MI  G
Sbjct: 831 IIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG 890

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P + +Y+ LI G C  G+ D+A      +LE +    +V  +  L DGL  AG  D  
Sbjct: 891 FQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEV-AWKILNDGLLKAGHVDIC 949

Query: 590 IMLWNEMEEKGCAPNRITF 608
             L + ME + C  +  T+
Sbjct: 950 SQLLSAMENRHCRIDSETY 968



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 238/587 (40%), Gaps = 89/587 (15%)

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           E   A + I R     + L+ K + + +   ++    +   +L+ ++ + G   D   Y+
Sbjct: 128 EAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYN 187

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I   CK   L +A + +  ++ SG+  D    + L+      G+L    K  W     
Sbjct: 188 TMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLR---KACW----- 239

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
               LL   +M  L+     + +Y +L Q + +   + +  V +LM+ +   SPN  ++ 
Sbjct: 240 ----LL---MMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYT 292

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL------------- 375
           ++I  L K+G++  A  L  EM + G + +V+ YN +IDG C S RL             
Sbjct: 293 LLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN 352

Query: 376 ---------------------EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
                                +E+ ELL      GF PT  T  ++    C+ + +  AL
Sbjct: 353 GCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDAL 412

Query: 415 N-----------------------LVRKMRVQ------------GHEPWVKHNTLLIKEL 439
                                   L++K R++            G  P V   T +I   
Sbjct: 413 RVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK GK   A         EG  P+   YS+ I GLI  +++  A+ L   +   G  P V
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y  +I G CK      A  LF  M   GL P    YN+L +  CKSG  ++A      
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAY----S 588

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L K+      +TYT+L+DG   AG  + A  L  +M  +GC  +  T+  L+  LCK  
Sbjct: 589 FLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   AL     M  +G+K ++  +  +IS  + E     A  +  EM
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 237/551 (43%), Gaps = 43/551 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  +I     VG V  A  +F   + EG C PN ++Y+ L+  L +   +   
Sbjct: 458 LSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG-CRPNAWTYSSLIYGLIQDQKLHKA 516

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
              + +MQ+ G      T T L+Q  C   +FD A  +F  +  +G   DE  +++L  A
Sbjct: 517 MALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 576

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G  ++A   + +     + L + T+  L+ GF K    + A  L +KM   G  +D
Sbjct: 577 LCKSGRAEEAYSFLVKK---GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKAD 633

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           +  Y V++  LCK K+L  AL +  +M   G+  +    + +I+          ++KE  
Sbjct: 634 SHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISE---------MIKEGK 684

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVS 321
            D           S+   ++S+G    A      + +  K   I + G  +  + +  V+
Sbjct: 685 HDH--------AKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVA 736

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI--------------- 366
           P+  ++++ IN     G +D A S  + M    C  N + Y  L+               
Sbjct: 737 PDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVD 796

Query: 367 -DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
             G+ N  +L+  ++LL  M + G  PT  T +S+    C+   +  A  L+  M  +  
Sbjct: 797 TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDI 856

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P  +  T+LIK  C      +A  F+T+M++ GF P +  Y   I GL D    D A  
Sbjct: 857 SPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKA 916

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF D+       + VA+ I+  GL KA  V     L + M  +       TY+++ N   
Sbjct: 917 LFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIH 976

Query: 546 KSGNIDQAMLC 556
           ++  + ++ +C
Sbjct: 977 EASGMYESYMC 987


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 274/579 (47%), Gaps = 31/579 (5%)

Query: 96  GWGYDKY----TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           G  YD Y    +   LL +     + D+A+ +F E++        V FS LL A +K  +
Sbjct: 26  GLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK 80

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            D      E+M+   +  N  T+ ++I+   ++S++  AL +  KM K G+       + 
Sbjct: 81  FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS 140

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR 267
           ++ G C   ++  A+ L  +M   G  PD   F  L   +   +   E   LV+ +   +
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-K 199

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 +   +++  L   G  D A NLL  M KG+  ADV +                +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI----------------Y 243

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I++L K   +D AL+LF EM   G   +VF Y++LI  LCN  R  ++  LL +M E
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T NS+     +   ++ A  L  +M  +  +P +     LI   C H +  E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +  T MV +  LPD+V Y+  I G    K+V   +ELFRD+   G   + V Y  +I 
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G  +A     A+ +F +M++ G+ P++ TYN L++G CK+G +++AM+     L+K    
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKME 482

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+ TY  + +G+C AG+ +D   L+  +  KG  P+ I +  +I+G CK      A   
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  MKE G  PD   +  LI A L + +   + E++KEM
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 170/603 (28%), Positives = 279/603 (46%), Gaps = 59/603 (9%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD-QVKREGLCVPNN-YSYNCLLE 74
           L  ++VKSR F  P  + F  + L ++  +++ +++     K E L V +N Y+YN ++ 
Sbjct: 52  LFGEMVKSRPF--PSIVEF-SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
            LC+   +      L +M   G+G    TL  LL  +C+  +  +A+++ +++++ G+  
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + V F+ L+    +  +  +A  L+ERM     + +  T+  +I+G  K+   D AL L 
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           +KM K    +D  +Y  +I  LCK + ++ AL L++EM   GI PD    S LI SC   
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI-SC--- 284

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                LCN         G    A  LL  M++ +          
Sbjct: 285 ---------------------LCNY--------GRWSDASRLLSDMLERK---------- 305

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                 ++PN  +F+ +I+   K+GKL  A  LF EM Q     N+  YN+LI+G C  +
Sbjct: 306 ------INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+E+ ++   M      P   T N++    C+ + VV  + L R M  +G        T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI    +      A      MV +G  P+I+ Y+  + GL    +++ A+ +F  +   
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              PD+  YNI+  G+CKA +V +  DLF  +  KG+ P V  YN +I+G+CK G  ++A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539

Query: 554 MLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
                +M  KE G  PD  TY TLI      G    +  L  EM     A +  T+  L+
Sbjct: 540 YTLFIKM--KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLV 596

Query: 613 TGL 615
           T +
Sbjct: 597 TDM 599


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 281/598 (46%), Gaps = 60/598 (10%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           V K   F+S      ++R     G   +   L  +++    C P   SYN +LE L    
Sbjct: 143 VFKESLFIS------IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
              +      +M         +T   +++ +C   + D ALS+  ++  HG V   V + 
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+ + SK   V++A +L+E M       + +TF  +I G  K  R+++A ++ ++M   
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           GFA D   Y  ++ GLCK  +++ A  L+  +      P  EI+                
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI------PKPEIV---------------- 354

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                          + N+++   V++G +D A  +L  M+    I              
Sbjct: 355 ---------------IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV------------- 386

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+  +++ +I    K+G + LAL +  +M   GC  NV+ Y  L+DG C   +++E+Y
Sbjct: 387 --PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L EM   G KP     N +    C+   +  A+ + R+M  +G +P V     LI  L
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+  +   A   L DM+ EG + + V Y+  I   +    +  A +L  ++   G   D 
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + YN +I GLC+A  V +A  LF +M+  G  PS  + N+LING C+SG +++A+     
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           M+ + S +PD++T+ +LI+GLC AGR +D + ++ +++ +G  P+ +TF  L++ LCK
Sbjct: 625 MVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 55/513 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F +++ AF    E+D A  L+  M       N   +  LIH   K +RV++ALQL ++M
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   DA  ++ +I GLCK  ++  A ++ + M   G  PD                 
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD----------------- 321

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                      D+ T   L N + +I    G +D A +L   + K               
Sbjct: 322 -----------DI-TYGYLMNGLCKI----GRVDAAKDLFYRIPK--------------- 350

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRL 375
                P    F+ +I+  +  G+LD A ++  +M T  G + +V  YN+LI G      +
Sbjct: 351 -----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
             + E+L +M   G KP  ++   +    C+   +  A N++ +M   G +P       L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   CK  +  EA     +M ++G  PD+  +++ I GL ++  +  AL L RD+ + G 
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             + V YN +I+   +   + EA  L NEM+ +G      TYN LI G C++G +D+A  
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              +ML ++  +P  I+   LI+GLC +G  ++A+    EM  +G  P+ +TF +LI GL
Sbjct: 586 LFEKML-RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           C+  R    L  FR ++ +G+ PD   F  L+S
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 259/552 (46%), Gaps = 59/552 (10%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++   +V  ++ A  L   + + G CVPN+  Y  L+ +L K   V+     L+E
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T   ++   C   + ++A  + N ++  G+  D+  +  L+    K G 
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
           VD A +L  R+    I +    F  LIHGFV   R+D A   L D +T  G   D   Y+
Sbjct: 338 VDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I G  K   + +AL++  +M+  G  P+                             V
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPN-----------------------------V 424

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            + T+L +   ++    G ID+AYN+L  M      AD            + PNT  F+ 
Sbjct: 425 YSYTILVDGFCKL----GKIDEAYNVLNEMS-----AD-----------GLKPNTVGFNC 464

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+   K+ ++  A+ +FREM + GC  +V+ +N+LI GLC  + ++ +  LLR+M   G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEA 448
                 T N++     RR ++  A  LV +M  QG     + +N+L IK LC+ G+  +A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL-IKGLCRAGEVDKA 583

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M+++G  P  +  +  I GL     V+ A+E  +++   G  PD+V +N +I+G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC+A R+ +   +F ++  +G+ P   T+N L++  CK G +  A L L   +E +   P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE-DGFVP 702

Query: 569 DVITYTTLIDGL 580
           +  T++ L+  +
Sbjct: 703 NHRTWSILLQSI 714



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 230/486 (47%), Gaps = 26/486 (5%)

Query: 186 VDKALQLFD-KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           V  +++LF    +++G+     +Y V+IG L  N + +   +L  +MK  GI     +  
Sbjct: 91  VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLL---CNSIMRILVSNGSIDQAYNLLQAMIK 301
            ++      G      + + E R+V +        N ++ ILVS      A N+   M+ 
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            +                + P   +F +++       ++D ALSL R+MT+ GC+ N  +
Sbjct: 211 RK----------------IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  LI  L   NR+ E+ +LL EM   G  P   T N +   LC+   +  A  +V +M 
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G  P       L+  LCK G+   A     D+      P+IV ++  I G +   R+D
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370

Query: 482 LALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            A  +  D + ++G  PDV  YN +I G  K   V  A ++ ++M  KG  P+V +Y +L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++G+CK G ID+A   L+ M   +   P+ + +  LI   C   R  +A+ ++ EM  KG
Sbjct: 431 VDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C P+  TF +LI+GLC+ D  + AL   R M  +G+  +   +  LI+AFL       A 
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549

Query: 661 EVLKEM 666
           +++ EM
Sbjct: 550 KLVNEM 555


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 261/553 (47%), Gaps = 52/553 (9%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F +++        V FS LL A +K  + D    L E+M +  I  N  T+ 
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           + I+ F ++S++  AL +  KM K G+       + ++ G C   ++  A+ L  +M   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD    + L+                                             + 
Sbjct: 175 GYQPDTVTFTTLV---------------------------------------------HG 189

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L Q     E +A V     M+ KG   P+  ++  +IN L K G+ DLAL+L  +M +  
Sbjct: 190 LFQHNKASEAVALVE---RMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V +YN +IDGLC    ++++++L  +ME  G KP  FT N +  CLC       A 
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGG 473
            L+  M  +   P +     LI    K GK +EA +   +MV+     PD+V Y+  I G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
               KRV+  +E+FR++   G   + V Y  +I G  +A+    A+ +F +M++ G+ P 
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TYN+L++G C +GN++ A++    M +K     D++TYTT+I+ LC AG+ +D   L+
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +  KG  PN +T+  +++G C+      A   F  MKE G  P+   +  LI A L +
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544

Query: 654 LNPPLAFEVLKEM 666
            +   + E++KEM
Sbjct: 545 GDEAASAELIKEM 557



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 240/535 (44%), Gaps = 52/535 (9%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+VKSR F S      L+  +  +   +    L +Q++  G+   N Y+Y+  +   
Sbjct: 62  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSIFINYF 120

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           C+   + L    L +M   G+G    TL  LL  +C+  +  +A+++ +++++ G+  + 
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           V F+ L+    +  +  +A  L+ERM     + +  T+  +I+G  K+   D AL L +K
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K    +D  +Y+ II GLCK K ++ A  L+++M+  GI PD    + LI SC     
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI-SC----- 294

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                              LCN         G    A  LL  M++              
Sbjct: 295 -------------------LCNY--------GRWSDASRLLSDMLEK------------- 314

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNR 374
               ++P+   F+ +I+  +K+GKL  A  L+ EM +   C  +V  YN LI G C   R
Sbjct: 315 ---NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE  E+ REM + G      T  ++     + +D   A  + ++M   G  P +    +
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+  LC +G    A      M +     DIV Y+  I  L    +V+   +LF  +   G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
             P+VV Y  ++SG C+     EA+ LF EM   G +P+  TYN LI    + G+
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 190/424 (44%), Gaps = 51/424 (12%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++ R ++ +  +D A  L   M+K  P                 P+   F  +++ + K 
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPF----------------PSIVEFSKLLSAIAKM 88

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K DL +SL  +M  +G   N++ Y+  I+  C  ++L  +  +L +M + G+ P+  TL
Sbjct: 89  NKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTL 148

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+    C    +  A+ LV +M   G++P     T L+  L +H KA EA   +  MV 
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  PD+V Y A I GL      DLAL L   +       DVV YN II GLCK + + +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS---------- 567
           A DLFN+M TKG+ P V TYN LI+  C  G    A   LS MLEK              
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328

Query: 568 -------------------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                    PDV+ Y TLI G C   R ++ + ++ EM ++G  
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            N +T+  LI G  +      A + F+ M   G+ PD+  +  L+    +  N   A  V
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448

Query: 663 LKEM 666
            + M
Sbjct: 449 FEYM 452


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 185/672 (27%), Positives = 297/672 (44%), Gaps = 58/672 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +A++  ++   A LR+L   + +     S      +++ LG+ G  +    L  +++REG
Sbjct: 60  LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREG 119

Query: 61  LCVPNNYSYNCLLEALCK----SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
             V         +E+  +      +VDLV  +L +   +G   D      LL V     +
Sbjct: 120 HQV-RAVVVRSFVESYARLRRFDDAVDLVLNQL-DNDTFGVQADTVVFNHLLNVLVEGSK 177

Query: 117 FDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
                SV+NE+   G   D    + L+ A  +  +V  A  ++E M    +  +E TF  
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTT 237

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+ GF+++  ++ AL++  KM ++G +      +V+I G CK  ++E AL    +    G
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                                  +  N+ +  L  NG +  A  +
Sbjct: 298 FEPD---------------------------------QVTYNTFVHGLCQNGHVSHALKV 324

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +                LM+ +G   P+  +++ +IN L K+G+LD A  +  +M   GC
Sbjct: 325 MD---------------LMLQEGH-DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +   +N LI  L + NRLEE+ +L RE+   G  P  +T N +   LC+  D    + 
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  +M+  G  P      +LI  LC  GK   A   L +M   G     V Y+  I  L 
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R++ A E+F  + A G     V +N +I GLCKA+R+ +A +L  +M+ +GL P+  
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN ++  +CK GNI +A   L  M        DV+TY TLI+GLC AGR   A+ L   
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMT-ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M  KG  P    +  +I  L + +  R AL  FR M E G  PD   +  +  +      
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG 667

Query: 656 P-PLAFEVLKEM 666
           P   AF+ L EM
Sbjct: 668 PIKEAFDFLVEM 679



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 260/554 (46%), Gaps = 34/554 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  + N L++ALC++  V    + L+EM  +G   D+ T T L+Q +   G  + AL V
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++++ G     V  ++L+  + K G V+ A   I++        ++ T+   +HG  +
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y+ +I  L KN +L+ A  + ++M   G  PD   
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374

Query: 243 LSKLITSCSDEGELT--------LLVKEIWEDRDVNTMTLLCNSIMRI------------ 282
            + LI + S +  L         L VK +  D  V T  +L N++ ++            
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPD--VYTFNILINALCKVGDPHLGIRLFEE 432

Query: 283 LVSNG-SIDQ-AYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGK 339
           + S+G + D+  YN+L   +         +++L   +    P +T +++ II+ L K  +
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A  +F +M   G  ++   +N LIDGLC + R++++ EL+ +M + G +P + T NS
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C++ ++  A +++  M   G E  V     LI  LCK G+   A + L  M  +G
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ-RVAEA 518
             P    Y+  I  L     +  AL LFR++   G  PD + Y I+   LC+    + EA
Sbjct: 613 IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEA 672

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK----ESGSPDVITYT 574
            D   EM+ KG +P  +++ +L  G    G  D  +  +  ++EK    ES +  +  Y 
Sbjct: 673 FDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDASAIRGYL 732

Query: 575 TL---IDGLCIAGR 585
            +    D L   GR
Sbjct: 733 KIRKYYDALATFGR 746



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           E  C P   + N L+   CK   V D +    +E+ D G+  D+ T    +   C +G  
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD-GFEPDQVTYNTFVHGLCQNGHV 318

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
             AL V + ++  G   D   ++ ++   SK GE+D+A  ++ +M D     +  TF  L
Sbjct: 319 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 378

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I     ++R+++AL L  ++T  G + D   ++++I  LCK     + ++L+ EMK SG 
Sbjct: 379 IVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 438

Query: 237 TPD---FEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSI---MRILVSNG 287
           TPD   + IL   + S    G    L+ E+  +   R   T   + +++   MRI  +  
Sbjct: 439 TPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498

Query: 288 SIDQ-----------AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
             DQ            +N L+  + K + I D    +  + K  + PN  +++ I+    
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K G +  A  +   MT  G   +V  Y  LI+GLC + R + + +LLR M   G +PT  
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM-EAFRFLTD 454
             N + + L RR ++  ALNL R+M   G  P      ++ + LC+ G  + EAF FL +
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVE 678

Query: 455 MVQEGFLPDIVCYSAAIGGLIDI 477
           MV +GF+P+   +     GL+++
Sbjct: 679 MVNKGFMPEFSSFRMLAEGLLNL 701



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 3/197 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  +FDQ+  +G+   +  ++N L++ LCK+  +D     +++M   G   +  T  
Sbjct: 493 IEEAEEVFDQMDAQGIS-RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYN 551

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            +L  YC  G   KA  +   +  +G+ +D   +  L+    K G    A +L+  M   
Sbjct: 552 SILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 611

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEM 223
            IR   K +  +I    +++ +  AL LF +MT+ G   DA  Y ++   LC+    ++ 
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKE 671

Query: 224 ALQLYSEMKGSGITPDF 240
           A     EM   G  P+F
Sbjct: 672 AFDFLVEMVNKGFMPEF 688


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 278/576 (48%), Gaps = 43/576 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  VDL     KEM + G+  D++T+       C  G++  AL +
Sbjct: 207 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 266

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                +   +D  + + ++    +    D+A   + RM   +   N  T+  L+ GF+KK
Sbjct: 267 IER--EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 324

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++    ++ + M   G   + ++++ ++   C  K    A +L + M   G  P + + 
Sbjct: 325 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 384

Query: 244 SKLITS-CSDEG----ELTLLVKEIW-EDRDVNTMTLLCN--SIMRILVSNGSIDQAYNL 295
           +  I S C  E     +L  L ++I+ E    N +    N  +  R L   G  D+A+ L
Sbjct: 385 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 444

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M++               KG V P+TS++  +I  L    K++ A  LF+EM  +G 
Sbjct: 445 IKEMMR---------------KGFV-PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 488

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V+ Y  LID  C +  +E++  L  EM   G  PT  T  ++     + + V  A +
Sbjct: 489 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 548

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV----------------QEG 459
           +  +M   G  P       L+  LCK G   +AF     ++                +  
Sbjct: 549 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y A + GL    +VD A EL   + + GC P+ + Y+ +I G CKA ++  A+
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F +M   G +PSV TY  LI+   K G +D AM  LS+ML K+S +P+V+TYT +IDG
Sbjct: 669 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDG 727

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           LC  G  + A+ L + MEEKGC+PN +T+ ALI GL
Sbjct: 728 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 272/669 (40%), Gaps = 104/669 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L   LG  G   +A  L  ++  E   V      N L+   C+    +     L  ++D+
Sbjct: 145 LADALGFDGRARDAERLLREIGEEDREVLGRL-LNVLVRRCCRGGMWNEALEELGRLKDF 203

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G+   K T   L+QV  ++GQ D    V  E+ + G+ +D         A  K G    A
Sbjct: 204 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 263

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++IER D    +L+      +I G ++ S  D+A+    +M  +    +   Y  ++ G
Sbjct: 264 LDMIERED---FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 320

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             K KQL    ++ + M   G  P+  + + L+ S  +E +                   
Sbjct: 321 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY---------------- 364

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                            AY LL  M   G P    G  +  IF G++             
Sbjct: 365 -----------------AYKLLNRMTTCGCP---PGYVVYNIFIGSICGQ--------EK 396

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L     LDLA  ++ EM    C+ N     N    LC   + +++++L++EM   GF P 
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 456

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T + +   LC    V  A  L ++M++ G  P V   T+LI   CK G   +A     
Sbjct: 457 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 516

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M   G  P +V Y+A I   +  K+V  A ++F  +   GC P+ V Y  ++ GLCKA 
Sbjct: 517 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 576

Query: 514 RVAEAEDLFNEMITKG----------------LIPSVATYNLLINGWCKSGNIDQAMLCL 557
            +++A +++ ++I                   L P+V TY  L++G CK+  +D A   L
Sbjct: 577 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 636

Query: 558 SRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG---------------- 600
             ML   SG  P+ I Y  LIDG C AG+ D A  ++ +M + G                
Sbjct: 637 DAML--SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694

Query: 601 -------------------CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                              C PN +T+ A+I GLC+      AL    +M+EKG  P++ 
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 754

Query: 642 VFVALISAF 650
            + ALI   
Sbjct: 755 TYTALIDGL 763



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 247/553 (44%), Gaps = 40/553 (7%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
            + ++L+    + G  ++A E + R+ D   R ++ T+  L+       +VD   ++  +
Sbjct: 175 RLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKE 234

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M++SGF  D          LCK  +   AL +           DF++ + L T       
Sbjct: 235 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER-------EDFKLDTVLCTH-----M 282

Query: 256 LTLLVKEIWEDRDVNTM-TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           ++ L++  + D  ++ +  + CNS +  +V+  +      LL   +K + +      + M
Sbjct: 283 ISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT------LLSGFLKKKQLGWCKRIINM 336

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +     +PN S F+ ++++   +     A  L   MT  GC     +YN  I  +C   +
Sbjct: 337 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 396

Query: 375 LEE------SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           L        + ++  EM  +        + +  RCLC       A  L+++M  +G  P 
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 456

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               + +I  LC   K  +AF    +M   G  PD+  Y+  I        ++ A  LF 
Sbjct: 457 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 516

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++ + GC P VV Y  +I    KA++V +A D+F+ M+  G  P+  TY  L++G CK+G
Sbjct: 517 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 576

Query: 549 NIDQAMLCLSRML---------------EKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           NI +A    ++++               ++ + +P+V+TY  L+DGLC A + D A  L 
Sbjct: 577 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 636

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + M   GC PN I + ALI G CK  +  +A   F  M + G  P +  + +LI     +
Sbjct: 637 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 696

Query: 654 LNPPLAFEVLKEM 666
               LA +VL +M
Sbjct: 697 GRLDLAMKVLSQM 709



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 173/376 (46%), Gaps = 44/376 (11%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           +++ + C ++   +    RCL  VG  ++A  L  ++ R+G  VP+  +Y+ ++  LC +
Sbjct: 412 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHA 470

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
             V+   +  +EM+  G   D YT T L+  +C +G  ++A  +F E+   G     V +
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+ A+ K  +V +A ++  RM D   R N+ T+  L+ G  K   + KA +++ K+  
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 590

Query: 199 SGFASDA----------------AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  ++D+                  Y  ++ GLCK  +++ A +L   M  SG  P+  +
Sbjct: 591 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 650

Query: 243 LSKLITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              LI      G      E+ L + +      V+T T L + + +    +G +D A  +L
Sbjct: 651 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK----DGRLDLAMKVL 706

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M+K                 + +PN  ++  +I+ L + G+ + AL L   M + GC 
Sbjct: 707 SQMLKD----------------SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 750

Query: 357 QNVFLYNNLIDGLCNS 372
            NV  Y  LIDGL  S
Sbjct: 751 PNVVTYTALIDGLGQS 766



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 148/371 (39%), Gaps = 72/371 (19%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           Q+G       Y+ L D L    R  ++  LLRE+ E   +     LN + R  CR     
Sbjct: 132 QVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWN 191

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD---IVCYS 468
            AL  + +++  G+ P       L++ L   G+    FR   +M + GF  D   + C++
Sbjct: 192 EALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFA 251

Query: 469 AA-----------------------------IGGLIDIKRVDLALELFRDICAHGCCPDV 499
            A                             I GL++    D A+     +  + C P+V
Sbjct: 252 HALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 311

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y  ++SG  K +++   + + N M+T+G  P+ + +N L++ +C   +   A   L+R
Sbjct: 312 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 371

Query: 560 ML--------------------EKESGSPDVITYTTLIDG-------------------- 579
           M                     +++  SPD++     I G                    
Sbjct: 372 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 431

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+ D A  L  EM  KG  P+  T+  +IT LC   +   A + F+ MK  G+ PD
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491

Query: 640 MFVFVALISAF 650
           ++ +  LI +F
Sbjct: 492 VYTYTILIDSF 502


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 183/645 (28%), Positives = 307/645 (47%), Gaps = 54/645 (8%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           L  L+R     GL +EA     ++K  G   P+  +YN L++ L  +  V++     KEM
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGY-RPSAVTYNALVQVLASAGQVEMGFRVQKEM 230

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVD 152
              G+  D+ T+    Q  C  G++  AL++  +  +   +D  + + ++    +    +
Sbjct: 231 SASGFCMDRSTIGYFAQALCKVGRWADALNMLEK--EDFNLDTVLCTQMISGLMEASLFN 288

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A   + RM   +   N  T+  L+ GF+KK +     ++ + M   G   + ++++ ++
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE----GELTLLVKEIWED- 266
            G C       A +L++ M   G  P +   +  I S C  E     EL  LV++++E+ 
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 267 -------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                    VNT      +  R L   G  ++A+ +L+ M++               KG 
Sbjct: 409 LAASCVLNKVNTA-----NFSRCLCGVGKFEKAFQILKEMMR---------------KGF 448

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+TS++  +I  L +  K++ +  LF+EM + G   +V+ Y  LID  C +  +E++ 
Sbjct: 449 V-PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
               EM   G  P   T  ++     + + ++ A ++  +M      P     + LI  L
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567

Query: 440 CKHG---KAMEAFRFL--------TDMVQEG-----FLPDIVCYSAAIGGLIDIKRVDLA 483
           CK G   KA E +  L        +D   EG       P++V Y A I GL   ++V  A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            EL   + A GC P+ + Y+ +I G CK  ++  A+++F  M   G +PSV TY  LI+ 
Sbjct: 628 HELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             K G +D AM  LS ML  +S +P+V+TYT +IDGL   G  + A+ L + MEEKGC+P
Sbjct: 688 MFKDGRLDLAMKVLSEML-NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSP 746

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           N +T+ ALI GL K  +  A+L  F+ M  KG  P+   +  LI+
Sbjct: 747 NVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 171/679 (25%), Positives = 289/679 (42%), Gaps = 83/679 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L    L  EA M F    R   C+PN  +Y  LL    K       +  +  M   
Sbjct: 277 MISGLMEASLFNEA-MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTE 335

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +      L+  YCN+G +  A  +FN +   G    +V ++I + +     E+  A
Sbjct: 336 GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395

Query: 155 --CELIERMDD------CNI-RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
              +L+E++ +      C + ++N   F   + G     + +KA Q+  +M + GF  D 
Sbjct: 396 ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGV---GKFEKAFQILKEMMRKGFVPDT 452

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI-- 263
           + Y  +I  LC+ K++E +  L+ EMK +G+ PD    + LI S    G    L+++   
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAG----LIEQARS 508

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
           W D             MR +  + ++     LL A +K + +         +      PN
Sbjct: 509 WFDE------------MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIG----------------CMQNVFLYNNLID 367
             ++  +I+ L K G++  A  ++ ++                       NV  Y  LID
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALID 616

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC + ++ +++ELL  M  +G +P     +++    C+   +  A  +  +M   G+ P
Sbjct: 617 GLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLP 676

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   T LI  + K G+   A + L++M+ +   P++V Y+A I GL  +  ++ AL L 
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLL 736

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   GC P+VV Y  +I GL K  +   +  LF +M +KG  P+  TY +LIN  C +
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAA 796

Query: 548 GNIDQAMLCLSRM--------------------------------LEKESGSPDVITYTT 575
           G +D+A L L  M                                +E     P    Y  
Sbjct: 797 GLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGM 856

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT---FMALITGLCKCDRPRAALVHFRMMK 632
           LID    AGR + A+ L  E+ E   + N  +   + +LI  LC   +   A   +  M 
Sbjct: 857 LIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMT 916

Query: 633 EKGMKPDMFVFVALISAFL 651
            KG+ PD+ VFV+L+   +
Sbjct: 917 RKGIVPDLIVFVSLVKGLI 935



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 242/574 (42%), Gaps = 123/574 (21%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVG---------------------------------- 44
           ++++ + C ++        RCL  VG                                  
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465

Query: 45  -LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
             VE++ +LF ++KR G+  P+ Y+Y  L+++ CK+  ++       EM+  G   +  T
Sbjct: 466 KKVEKSFLLFQEMKRAGV-NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM- 161
            T LL  Y  S Q  +A  +F+ ++D   + +   +S L+    K GE+ KACE+ E++ 
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584

Query: 162 ---------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
                          D C I  N  T+  LI G  K  +V  A +L D M  +G   +  
Sbjct: 585 GTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQI 644

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE- 265
           +YD +I G CK  +++ A +++  M   G  P     + LI     +G L L +K + E 
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 266 -----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
                + +V T T + + + ++    G I++A NLL                LM  KG  
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKV----GEIEKALNLLS---------------LMEEKG-C 744

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SPN  ++  +I+ L K GK D +L LF++M   GC  N   Y  LI+  C +  L+E++ 
Sbjct: 745 SPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHL 804

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVK-------- 430
           LL EM+ + + P H      + C  +   +  + +L L+ +M      P           
Sbjct: 805 LLDEMKHTHW-PKHL---QGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDS 860

Query: 431 -------------HNTL-----------------LIKELCKHGKAMEAFRFLTDMVQEGF 460
                        H  L                 LI+ LC   +  EAF   T+M ++G 
Sbjct: 861 FSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGI 920

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +PD++ + + + GLI++ + D AL+L    C  G
Sbjct: 921 VPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEG 954



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 8/329 (2%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            ++++    + G  D AL     +   G   +   YN L+  L ++ ++E  + + +EM 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            SGF     T+    + LC+      ALN++ K             T +I  L +     
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLC---TQMISGLMEASLFN 288

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA  FL  M     +P++V Y   + G +  K+      +   +   GC P+   +N ++
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML--CLSRMLEKE 564
            G C A   A A  LFN M T G  P    YN+ I   C    +  A L   + ++ E+ 
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 565 SGSPDVITYTTLID---GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             +  V+      +    LC  G+ + A  +  EM  KG  P+  T+  +IT LC+  + 
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             + + F+ MK  G+ PD++ +  LI +F
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSF 497



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 4/271 (1%)

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G+  T    +++   L        A  L+R++     E   +   +L++  C+HG   EA
Sbjct: 129 GYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEA 188

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L  +   G+ P  V Y+A +  L    +V++   + +++ A G C D          
Sbjct: 189 LEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQA 248

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  R A+A    N +  +           +I+G  ++   ++AM  L RM    S  P
Sbjct: 249 LCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM-RCNSCIP 304

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +V+TY TL+ G     +      + N M  +GC PN   F +L+ G C       A   F
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
             M   G  P    +   I +   +   P A
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 228/461 (49%), Gaps = 16/461 (3%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+  FV+K +  +A  LF        + D+  Y  +I G CK +  + A +L  EM+  G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           I P   + + +I    D G +   +    + +     +++  +I               L
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTI---------------L 108

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           + A+ K   I+D  + +  + +   +PN  +++ +IN   K G +D A+ LF +M +  C
Sbjct: 109 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 168

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +VF YN LIDG C   R ++  +LL+EM + G +P   T N++   L +    + A N
Sbjct: 169 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 228

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L + M  +  +P      L+I   CK G+   A+     M   G LPDI  Y+  I G  
Sbjct: 229 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 288

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+D A +L   +   GC PDVV YN I+SGLCKA +V EA +++  +   G    V 
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           T + LI+G CKS  +D A   L R +E+   +PDV+ YT LI G C A + D ++  ++E
Sbjct: 349 TCSTLIDGLCKSRRLDDAEKLL-REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           M +KGC P  IT+  +I  LCK  R R   +  + M E+G+
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 231/486 (47%), Gaps = 51/486 (10%)

Query: 47  EEANMLFDQVKRE--GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           ++A   +D  K    GLC P++ +Y+ L+   CK+         L EM+  G        
Sbjct: 12  KKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVY 71

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
             +++  C++G+ D AL  + ++  H       ++IL+ A  K   +  A  ++E M + 
Sbjct: 72  NTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEA 131

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               N  T+  LI+GF K   +D+A+ LF++M ++  + D   Y+++I G CK ++ +  
Sbjct: 132 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 191

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            +L  EM   G  P+F                                 +  N++M  LV
Sbjct: 192 AKLLQEMVKYGCEPNF---------------------------------ITYNTLMDSLV 218

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            +G    A+NL Q M++ +                  P+  +F+++I+   K G+LDLA 
Sbjct: 219 KSGKYIDAFNLAQMMLRRD----------------CKPSHFTFNLMIDMFCKVGQLDLAY 262

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            LF+ MT  GC+ +++ YN +I G C +NR++++ +LL  M E+G  P   T NS+   L
Sbjct: 263 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A  +   +R  G+   V   + LI  LCK  +  +A + L +M + G  PD+
Sbjct: 323 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y+  I G     ++D +L  F ++   GC P V+ Y+I+I  LCK+ RV +   L   
Sbjct: 383 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 442

Query: 525 MITKGL 530
           M+ +G+
Sbjct: 443 MLERGV 448



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 182/372 (48%), Gaps = 20/372 (5%)

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QAY LL  M K               +G V P+ + ++ II  L  +G++D AL  +R+M
Sbjct: 51  QAYRLLDEMEK---------------RGIV-PHNAVYNTIIKGLCDNGRVDSALVHYRDM 94

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q  C  +V  Y  L+D LC S R+ ++  +L +M E+G  P   T N++    C+  ++
Sbjct: 95  -QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ L  +M      P V    +LI   CK  +  +  + L +MV+ G  P+ + Y+  
Sbjct: 154 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 213

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +  L+   +   A  L + +    C P    +N++I   CK  ++  A +LF  M  +G 
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           +P + TYN++I+G C++  ID A   L RM E     PDV+TY +++ GLC A + D+A 
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEA-GCPPDVVTYNSIVSGLCKASQVDEAY 332

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++  +   G   + +T   LI GLCK  R   A    R M+  G  PD+  +  LI  F
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392

Query: 651 --LSELNPPLAF 660
               +L+  LAF
Sbjct: 393 CKADQLDKSLAF 404



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 2/269 (0%)

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N +     R++    A +L +        P     + LI   CK     +A+R L +M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +P    Y+  I GL D  RVD AL  +RD+  H C P V+ Y I++  LCK+ R+++
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  +  +MI  G  P+V TYN LING+CK GN+D+A++  ++MLE  S SPDV TY  LI
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILI 179

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG C   RP D   L  EM + GC PN IT+  L+  L K  +   A    +MM  +  K
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P  F F  +I  F       LA+E+ + M
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLM 268



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 172/372 (46%), Gaps = 37/372 (9%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++  ++  K   A  LF+      C  +   Y+ LI+G C +   +++Y LL EME+ G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEA 448
             P +   N++ + LC    V  AL   R M  Q H  P V   T+L+  LCK  +  +A
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM--QRHCAPSVITYTILVDALCKSARISDA 121

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L DM++ G  P++V Y+  I G   +  +D A+ LF  +  + C PDV  YNI+I G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG------NIDQAML------- 555
            CK +R  +   L  EM+  G  P+  TYN L++   KSG      N+ Q ML       
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 556 -----------C----------LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
                      C          L +++      PD+ TY  +I G C A R DDA  L  
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M E GC P+ +T+ ++++GLCK  +   A   + +++  G   D+     LI       
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 655 NPPLAFEVLKEM 666
               A ++L+EM
Sbjct: 362 RLDDAEKLLREM 373



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 179/390 (45%), Gaps = 51/390 (13%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +   L ++ RI+   ++ +D++++ C  +      LI     +G ++EA +LF+Q+  E 
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM-LEN 166

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+ ++YN L++  CK          L+EM  YG   +  T   L+     SG++  A
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 226

Query: 121 LSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            ++   ++       H  F++++  F K G++D A EL + M D     +  T+ ++I G
Sbjct: 227 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 286

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + +R+D A QL ++MT++G   D   Y+ I+ GLCK  Q++ A ++Y  ++  G   D
Sbjct: 287 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 346

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                             + C++++  L  +  +D A  LL+ M
Sbjct: 347 ---------------------------------VVTCSTLIDGLCKSRRLDDAEKLLREM 373

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            +                   +P+  ++ I+I+   K  +LD +L+ F EM   GC+  V
Sbjct: 374 ERNGS----------------APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 417

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESG 389
             Y+ +ID LC S R+ +   LL+ M E G
Sbjct: 418 ITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 3/237 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S++   + I     LAQ +++  C  S      +I     VG ++ A  LF  +   G
Sbjct: 214 MDSLVKSGKYIDAFN-LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C+P+ Y+YN ++   C++  +D     L+ M + G   D  T   ++   C + Q D+A
Sbjct: 273 -CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             V+  + + G+ +D    S L+    K   +D A +L+  M+      +   + +LIHG
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           F K  ++DK+L  F +M   G       Y ++I  LCK+ ++     L   M   G+
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 171/612 (27%), Positives = 297/612 (48%), Gaps = 49/612 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  V++     KEM   G+  D+ T+    Q  C  G++  AL +
Sbjct: 202 PSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL 261

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL-NEKTFCVLIHGFVK 182
                +   +D  + + ++    +    ++A   + RM  CN  + N  T+  L+ GF+K
Sbjct: 262 LER--EDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMR-CNSYIPNVVTYRTLLTGFLK 318

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++    ++ + M   G     ++++ ++   C  +    A +L++ M   G  P + +
Sbjct: 319 KKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVV 378

Query: 243 LSKLITS-CSDE----GELTLLVKEIWEDRDVNTMTLLCNSI-----MRILVSNGSIDQA 292
            +  I S C  E     EL  L ++++E+  V +  L  N I      R L   G  ++A
Sbjct: 379 YNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVL--NKINTANFARCLCGVGKFEKA 436

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + +++ M++               KG V P+ S++  +I  L +  ++D A  LF+EM +
Sbjct: 437 FQIVKEMMR---------------KGFV-PDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
           +G   +V+ Y  LID  C +  +E++     EM  +G  P   T  ++     + + +  
Sbjct: 481 VGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQ 540

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHG---KAMEAFRFL---TDMVQEGFL----- 461
           A ++  +M      P     + LI  LCK G   KA E +  L   +D ++  F      
Sbjct: 541 ANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKD 600

Query: 462 -----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
                P++V Y A + GL   ++V  A +L   + A GC P+ + Y+ ++ G CK   + 
Sbjct: 601 TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEID 660

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A+++F  M   G +PSV TY  LI+   K G +D AM  LS+ML K+S +P+V+TYT +
Sbjct: 661 SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCNPNVVTYTAM 719

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +DGLC  G  + A+ L + ME+KGC+PN +T+ ALI GL K  +  A L  F  MK KG 
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 637 KPDMFVFVALIS 648
            P+   +  LI+
Sbjct: 780 APNYVTYRILIN 791



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 159/640 (24%), Positives = 271/640 (42%), Gaps = 55/640 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV--- 82
           C  SP     L+    +      A  LF+++   G C P    YN  + ++C    +   
Sbjct: 337 CNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG-CPPGYVVYNIFIGSICGREELPNP 395

Query: 83  ---DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
              DL E   +EM       +K       +  C  G+F+KA  +  E++  G+V D   +
Sbjct: 396 ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTY 455

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + ++    +   VDKA  L + M    +  +  T+ +LI  F K   +++A   FD+M  
Sbjct: 456 TKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRS 515

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +G + +   Y  ++    K+KQL  A  ++  M G    P+    S LI      GE+  
Sbjct: 516 AGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQK 575

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                            C    +++ ++ +I+  +                      F+G
Sbjct: 576 A----------------CEVYAKLIGTSDNIESDF---------------------YFEG 598

Query: 319 ----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
               T+SPN  ++  ++N L K  K+  A  L   M   GC  N  +Y+ L+DG C    
Sbjct: 599 KDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE 658

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           ++ + E+   M + G+ P+  T  S+   + +   +  A+ ++ +M      P V   T 
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTA 718

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++  LCK G+  +A   L+ M ++G  P++V Y+A I GL    +VD  LELF  +   G
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+ V Y I+I+  C A  + +A  L +EM        +  Y   + G+ K      A 
Sbjct: 779 CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF---LAS 835

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT---FMAL 611
           L L   +E    +P    Y  LID    AGR + A+ L  EM E   + N  +     +L
Sbjct: 836 LGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSL 895

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           I  LC   +   A+  +  M+ +G+ PD+  FV L+   +
Sbjct: 896 IQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLI 935



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 232/539 (43%), Gaps = 81/539 (15%)

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL+   ++   G+   A  Y+ ++  L    Q+EMA ++  EM  SG   D   +    
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
            +   EG     + ++ E  D    T+LC  ++  L+     ++A + L  M     I  
Sbjct: 247 QALCKEGRWGDAL-DLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI-- 303

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                         PN  ++  ++   LK  +L     +   M   GC  +  L+N+L+ 
Sbjct: 304 --------------PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA--LNLVRKMRVQGH 425
             CN+     +Y+L   M   G  P +   N     +C R+++     L+L  K+    +
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKV----Y 405

Query: 426 EPWVKHNTLLIKE--------LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           E  +  + +L K         LC  GK  +AF+ + +M+++GF+PD   Y+  I  L   
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA 465

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           KRVD A  LF+++   G  PDV  Y I+I   CKA  + +A+  F+EM + G  P+V TY
Sbjct: 466 KRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTY 525

Query: 538 -----------------------------------NLLINGWCKSGNIDQAMLCLSRML- 561
                                              + LI+G CK+G I +A    ++++ 
Sbjct: 526 TALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIG 585

Query: 562 --------------EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
                         + ++ SP+V+TY  L++GLC A +  DA  L + M   GC PN+I 
Sbjct: 586 TSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIV 645

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + AL+ G CK     +A   F  M + G  P +  + +LI     +    LA +VL +M
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 704



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 151/616 (24%), Positives = 253/616 (41%), Gaps = 103/616 (16%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
           L  ++D+G+     T   L+QV  ++GQ + A  V  E+   G+ +D         A  K
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCK 251

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G    A +L+ER D    +L+      +I G ++ S  ++A+    +M  + +  +   
Sbjct: 252 EGRWGDALDLLERED---FKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVT 308

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-TSCSDEGELTLLVKEIWED 266
           Y  ++ G  K KQL    ++ + M   G  P   + + L+ T C+ E             
Sbjct: 309 YRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAE------------- 355

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTS 325
                                    AY L   M   G P    G  +  IF G++     
Sbjct: 356 ---------------------DYAYAYKLFNRMNTCGCP---PGYVVYNIFIGSICGREE 391

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
               + N  L    LDLA  ++ EM    C+ N     N    LC   + E+++++++EM
Sbjct: 392 ----LPNPEL----LDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEM 443

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              GF P   T   +   LC+ + V  A  L ++M+  G  P V   T+LI   CK G  
Sbjct: 444 MRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLI 503

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A  +  +M   G  P++V Y+A +   +  K++  A ++F  +    C P+ + Y+ +
Sbjct: 504 EQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSAL 563

Query: 506 ISGLCKAQRVAEAEDLFNEMI----------------TKGLIPSVATYNLLINGWCKSGN 549
           I GLCKA  + +A +++ ++I                T  + P+V TY  L+NG CK+  
Sbjct: 564 IDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQK 623

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA-------------------------- 583
           +  A   L  ML      P+ I Y  L+DG C                            
Sbjct: 624 VSDAHDLLDAMLAA-GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYT 682

Query: 584 ---------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
                    GR D A+ + ++M +  C PN +T+ A++ GLCK      AL    +M++K
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742

Query: 635 GMKPDMFVFVALISAF 650
           G  P++  + ALI   
Sbjct: 743 GCSPNVVTYTALIDGL 758



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/563 (23%), Positives = 252/563 (44%), Gaps = 51/563 (9%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           ++++ + C ++        RCL  VG  E+A  +  ++ R+G  VP+  +Y  ++  LC+
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGF-VPDASTYTKVITFLCQ 464

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
           +  VD   +  +EM+  G   D YT T L+  +C +G  ++A S F+E+   G     V 
Sbjct: 465 AKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVT 524

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM- 196
           ++ LL A+ K  ++ +A ++  RM       N  T+  LI G  K   + KA +++ K+ 
Sbjct: 525 YTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584

Query: 197 -TKSGFASD--------------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            T     SD                 Y  ++ GLCK +++  A  L   M  +G  P+  
Sbjct: 585 GTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQI 644

Query: 242 ILSKLITSCSDEGELT------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           +   L+      GE+       L + +      V+T T L + + +    +G +D A  +
Sbjct: 645 VYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK----DGRLDLAMKV 700

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M+                K + +PN  ++  +++ L K G+ + AL+L   M + GC
Sbjct: 701 LSQML----------------KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGC 744

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV  Y  LIDGL  + +++   EL  +M+  G  P + T   +    C    +  A  
Sbjct: 745 SPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHL 804

Query: 416 LVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           L+ +M+ Q H P +++     ++   K  + + +   L +M      P    Y   I   
Sbjct: 805 LLDEMK-QTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSF 861

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVA---YNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
               R++ ALEL +++       ++ +   +  +I  LC + +V EA  L++EM  +G++
Sbjct: 862 SKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIV 921

Query: 532 PSVATYNLLINGWCKSGNIDQAM 554
           P ++ +  L+ G  +    ++A+
Sbjct: 922 PDLSAFVCLVKGLIERNKWNEAL 944



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 210/504 (41%), Gaps = 72/504 (14%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A +LF ++K+ G+  P+ Y+Y  L+++ CK+  ++  +    EM+  G   +  T T
Sbjct: 468 VDKAFLLFQEMKKVGV-NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 106 PLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERM--- 161
            LL  Y  S Q  +A  +F+ ++ D  + +   +S L+    K GE+ KACE+  ++   
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGT 586

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        D   I  N  T+  L++G  K  +V  A  L D M  +G   +  +Y
Sbjct: 587 SDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY 646

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D ++ G CK  +++ A +++  M   G  P     + LI     +G L L +K + +   
Sbjct: 647 DALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 706

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              N   +   +++  L   G  ++A NLL  M K               KG  SPN  +
Sbjct: 707 DSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEK---------------KG-CSPNVVT 750

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN--------------- 371
           +  +I+ L K GK+D  L LF +M   GC  N   Y  LI+  C                
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMK 810

Query: 372 ------------------SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
                             S R   S  LL EME     P       +     +   +  A
Sbjct: 811 QTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETA 870

Query: 414 LNLVRKMRVQGHEPWVKH---NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           L L ++M        +     +T LI+ LC   +  EA    ++M + G +PD+  +   
Sbjct: 871 LELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCL 930

Query: 471 IGGLIDIKRVDLALELFRDICAHG 494
           + GLI+  + + AL+L   IC  G
Sbjct: 931 VKGLIERNKWNEALQLCYGICQEG 954



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 140/339 (41%), Gaps = 24/339 (7%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE---SYELLREMEESGFKPT 393
           DGK +  L  +RE          FL ++++  +  + R  E    + L  E  + G+K T
Sbjct: 85  DGKAERFLRRYRE----------FLTDSVVVAVLGAVRSPELCVRFFLWAE-RQVGYKHT 133

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               +++   L        A  L+R++     +   +   +L++  C  G   EA   L 
Sbjct: 134 GACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELG 193

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +   G+ P  V Y+A +  L    +V++A  + +++ A G C D          LCK  
Sbjct: 194 RLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEG 253

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R  +A DL      K L   + T   +I+G  ++   ++AM  L RM    S  P+V+TY
Sbjct: 254 RWGDALDLLEREDFK-LDTVLCTQ--MISGLMEASLFNEAMSFLHRM-RCNSYIPNVVTY 309

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TL+ G     +      + N M  +GC P+   F +L+   C  +    A   F  M  
Sbjct: 310 RTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNT 369

Query: 634 KGMKPDMFVFVALISAFLS--ELNPP----LAFEVLKEM 666
            G  P   V+   I +     EL  P    LA +V +EM
Sbjct: 370 CGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEM 408


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/606 (28%), Positives = 286/606 (47%), Gaps = 26/606 (4%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN  L  + ++ ++D +E  L+EM   G+G   +    L+  +  S +  +A  V   + 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 129 DHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
              +      ++ L+ A S     D    L  +M +     N   F  L+  F ++ R+D
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            AL L D+M  + F +D  +Y+V I    K  +++MA + + EMK  G+ PD    + LI
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLC----NSIMRILVSNGSIDQAYNLLQAMIKGE 303
                   L   V E++E+ D+N  ++ C    N+++    S G  D+AY+LL+   +  
Sbjct: 316 GVLCKARRLDEAV-ELFEELDLNR-SVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 304 PIADVGV---------------EMLMI---FKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            I  V                 E L I    +   +PN ++++I+I+ L K G+L+ AL 
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +   M + G   N+   N +ID LC + +L+E+  +   ++     P   T  S+   L 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           RR  V  A +L  KM      P V   T LI+   K G+  +  +   +MV  G  PD++
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             ++ +  +     V+    LF +I A G  PDV +Y+I+I GL KA    E   LF EM
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +GL   V  YN +I+G+CKSG +D+A   L  M  K    P V+TY +++DGL    R
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK-GLQPTVVTYGSVVDGLAKIDR 672

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A ML+ E +  G   N + + +LI G  K  R   A +    + +KG+ P+ + +  
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732

Query: 646 LISAFL 651
           L+ A +
Sbjct: 733 LLDALV 738



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 176/678 (25%), Positives = 316/678 (46%), Gaps = 50/678 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS A R  P+  L   + +     +      L+R     G ++ A  L D++K       
Sbjct: 213 LSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMK------S 266

Query: 65  NNYSYNCLLEALCKSC-----SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           N+++ + +L  +C  C      VD+      EM+  G   D  T T L+ V C + + D+
Sbjct: 267 NSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDE 326

Query: 120 ALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A+ +F E+ ++      + ++ +++ +   G+ D+A  L+ER        +   +  ++ 
Sbjct: 327 AVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILT 386

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              +K +V++AL++ D+M +   A +   Y+++I  LCK  +LE AL++   MK +G+ P
Sbjct: 387 CLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFP 445

Query: 239 DFEILS----------KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           +   ++          KL  +CS    + L +       D  T   L + + R     G 
Sbjct: 446 NIMTVNIMIDRLCKAQKLDEACS----IFLGLDHKVCSPDSRTFCSLIDGLGR----RGR 497

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +D AY+L + M+  + I                PN   +  +I    K G+ +    +++
Sbjct: 498 VDDAYSLYEKMLDSDQI----------------PNVVVYTSLIQNFFKCGRKEDGHKIYK 541

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   GC  ++ L N+ +D +  +  +E+   L  E++  G  P   + + +   L +  
Sbjct: 542 EMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601

Query: 409 DVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                  L  +M+ QG H   + +NT+ I   CK GK  +A++ L +M  +G  P +V Y
Sbjct: 602 FSRETYKLFYEMKEQGLHLDVLAYNTV-IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
            + + GL  I R+D A  LF +  + G   +VV Y+ +I G  K  R+ EA  +  E++ 
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KGL P+  T+N L++   K+  ID+A +C   M +    SP+ +TY+ +I+GLC+  + +
Sbjct: 721 KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM-KNLKCSPNAMTYSIMINGLCMIRKFN 779

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A + W EM+++G  PN IT+  +I GL K      A   F   K  G  PD   + A+I
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839

Query: 648 SAFLSELNPPLAFEVLKE 665
               S      A+ V +E
Sbjct: 840 EGLSSANKAMDAYIVFEE 857



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 296/615 (48%), Gaps = 26/615 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +Y  L+ AL  +   D +     +MQ+ G+  + +  T L++V+   G+ D ALS+
Sbjct: 201 PAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSL 260

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+  + +  + V +++ +  F K G+VD A +    M    +  ++ T+  LI    K
Sbjct: 261 LDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK 320

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+D+A++LF+++  +        Y+ +I G     + + A  L    K  G  P    
Sbjct: 321 ARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIA 380

Query: 243 LSKLITSCSDEGELTLLVK---EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + ++T    +G++   ++   E+ +D   N  T   N ++ +L   G ++ A  +   M
Sbjct: 381 YNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTY--NILIDMLCKAGELEAALKVQDTM 438

Query: 300 IKGEPIADVGVEMLMI---------------FKG----TVSPNTSSFDIIINTLLKDGKL 340
            +     ++    +MI               F G      SP++ +F  +I+ L + G++
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRV 498

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A SL+ +M     + NV +Y +LI       R E+ +++ +EM   G  P    LNS 
Sbjct: 499 DDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSY 558

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             C+ +  +V     L  +++ QG  P V+  ++LI  L K G + E ++   +M ++G 
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             D++ Y+  I G     +VD A +L  ++   G  P VV Y  ++ GL K  R+ EA  
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF E  + G+  +V  Y+ LI+G+ K G ID+A L L  +++K   +P+  T+  L+D L
Sbjct: 679 LFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNSYTWNCLLDAL 737

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             A   D+A + +  M+   C+PN +T+  +I GLC   +   A V ++ M+++G+KP+ 
Sbjct: 738 VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNN 797

Query: 641 FVFVALISAFLSELN 655
             +  +I+      N
Sbjct: 798 ITYTTMIAGLAKAGN 812



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/618 (27%), Positives = 288/618 (46%), Gaps = 55/618 (8%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L +ARR+     L +++  +R      A   +I   GS G  +EA  L ++ KR+G C+
Sbjct: 317 VLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG-CI 375

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  +YNC+L  L +   V+       EM QD       Y +  L+ + C +G+ + AL 
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNI--LIDMLCKAGELEAALK 433

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V + + + G + +    +I++    K  ++D+AC +   +D      + +TFC LI G  
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++ RVD A  L++KM  S    +  +Y  +I    K  + E   ++Y EM   G +PD  
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL- 552

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                           +L NS M  +   G +++   L +  IK
Sbjct: 553 --------------------------------MLLNSYMDCVFKAGEVEKGRALFEE-IK 579

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + +                P+  S+ I+I+ L+K G       LF EM + G   +V  
Sbjct: 580 AQGLV---------------PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLA 624

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +IDG C S +++++Y+LL EM+  G +PT  T  S+   L +   +  A  L  + +
Sbjct: 625 YNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 684

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +  V   + LI    K G+  EA+  L +++Q+G  P+   ++  +  L+  + +D
Sbjct: 685 SIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEID 744

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A   F+++    C P+ + Y+I+I+GLC  ++  +A   + EM  +GL P+  TY  +I
Sbjct: 745 EAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            G  K+GN+ +A     R  +   G PD   Y  +I+GL  A +  DA +++ E   KGC
Sbjct: 805 AGLAKAGNVMEARGLFDR-FKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGC 863

Query: 602 APNRITFMALITGLCKCD 619
             N  T + L+  L K D
Sbjct: 864 RVNSKTCVVLLDALHKAD 881



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 238/534 (44%), Gaps = 22/534 (4%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
            V++  L+  ++   +D   +++E M      L+      L+  FVK  ++ +A  + + 
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEM 193

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K  F    + Y  +IG L    + +  L L+ +M+  G   +  + + L+   + EG 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 256 LTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           +   +  + ++   N+ T   +L N  +      G +D A+     M             
Sbjct: 254 IDAAL-SLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKA----------- 301

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +G V P+  ++  +I  L K  +LD A+ LF E+     +  V+ YN +I G  ++
Sbjct: 302 ----QGLV-PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + +E+Y LL   +  G  P+    N +  CL R+  V  AL +  +MR Q   P +   
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTY 415

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI  LCK G+   A +    M + G  P+I+  +  I  L   +++D A  +F  +  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             C PD   +  +I GL +  RV +A  L+ +M+    IP+V  Y  LI  + K G  + 
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
                  M+ +   SPD++   + +D +  AG  +    L+ E++ +G  P+  ++  LI
Sbjct: 536 GHKIYKEMVHR-GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILI 594

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            GL K    R     F  MKE+G+  D+  +  +I  F        A+++L+EM
Sbjct: 595 HGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 16/342 (4%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR----EMTQIGCMQNVFLYNNLI 366
           E L +F     P     ++I+  + +   +++A   FR    +  Q  C +   +YN  +
Sbjct: 89  EALNVFDEMSQP-----EVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPE---VYNAFL 140

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             +  +  L+   ++L EM  +GF  ++     +     +   +  A  ++  MR     
Sbjct: 141 MVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFR 200

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P     T LI  L    +          M + G+  ++  ++  +       R+D AL L
Sbjct: 201 PAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSL 260

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             ++ ++    D+V YN+ I    K  +V  A   F+EM  +GL+P   TY  LI   CK
Sbjct: 261 LDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK 320

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +  +D+A+  L   L+     P V  Y T+I G   AG+ D+A  L    + KGC P+ I
Sbjct: 321 ARRLDEAVE-LFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379

Query: 607 TFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALI 647
            +  ++T L +  +   AL +H  M ++    P++  +  LI
Sbjct: 380 AYNCILTCLGRKGKVEEALRIHDEMRQDAA--PNLTTYNILI 419


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 258/536 (48%), Gaps = 51/536 (9%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F E++    +   V F+ LL A +K  + D    L ERM +  I  +  ++ 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL +  KM K G+  D      ++ G C  K++  A+ L  +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
              P                               NT+T   N+++  L  +    +A  
Sbjct: 164 EYQP-------------------------------NTVTF--NTLIHGLFLHNKASEAVA 190

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M+                +G   P+  ++  ++N L K G +DLALSL ++M +  
Sbjct: 191 LIDRMVA---------------RG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 234

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V +Y  +ID LCN   + ++  L  EM+  G +P   T NS+ RCLC       A 
Sbjct: 235 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 294

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V   + LI    K GK +EA +   +M++    PDI  YS+ I G 
Sbjct: 295 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 354

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R+D A  +F  + +  C P+VV YN +I G CKA+RV E  +LF EM  +GL+ + 
Sbjct: 355 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN LI G  ++G+ D A     +M+  +   PD+ITY+ L+DGLC  G+ + A++++ 
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFE 473

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +++    P+  T+  +I G+CK  +       F  +  KG+KP++ ++  +IS F
Sbjct: 474 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 529



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 24/558 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +N LL A+ K    DLV    + MQ+    YD Y+   L+  +C   Q   AL+
Sbjct: 61  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 120

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +++  G+  + V  S LL  +     + +A  L+++M     + N  TF  LIHG  
Sbjct: 121 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 180

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             ++  +A+ L D+M   G   D   Y  ++ GLCK   +++AL L  +M+   I  D  
Sbjct: 181 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 240

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           I + +I +  +   +   +    E  ++ +    +  NS++R L + G    A  LL  M
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+ +                ++PN  +F  +I+  +K+GKL  A  L+ EM +     ++
Sbjct: 301 IERK----------------INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F Y++LI+G C  +RL+E+  +   M      P   T N++ +  C+ + V   + L R+
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 420 MRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M  +G     V +NTL I+ L + G    A +    MV +G  PDI+ YS  + GL    
Sbjct: 405 MSQRGLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +++ AL +F  +      PD+  YNI+I G+CKA +V +  DLF  +  KG+ P+V  Y 
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            +I+G+C+ G  ++A      M  KE G+ P+  TY TLI      G    +  L  EM 
Sbjct: 524 TMISGFCRKGLKEEADALFREM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 581

Query: 598 EKGCAPNRITFMALITGL 615
             G   +  T   +I  L
Sbjct: 582 SCGFVGDASTISMVINML 599



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 69/403 (17%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            +L D KLD A+ LF EM Q   + ++  +N L+  +   N+ +    L   M+      
Sbjct: 38  NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 97

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             ++ N +  C CRR  +  AL ++ KM   G+EP +   + L+   C   +  EA   +
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 157

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M    + P+ V ++  I GL    +   A+ L   + A GC PD+  Y  +++GLCK 
Sbjct: 158 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 217

Query: 513 -----------------------------------QRVAEAEDLFNEMITKGLIPSVATY 537
                                              + V +A +LF EM  KG+ P+V TY
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLE----------------------------------K 563
           N LI   C  G    A   LS M+E                                  K
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            S  PD+ TY++LI+G C+  R D+A  ++  M  K C PN +T+  LI G CK  R   
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  FR M ++G+  +   +  LI       +  +A ++ K+M
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 193/433 (44%), Gaps = 22/433 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  L D++   G C P+ ++Y  ++  LCK   +DL    LK+M+      D    T +
Sbjct: 187 EAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 245

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   CN    + AL++F E+ + G     V ++ L+     +G    A  L+  M +  I
Sbjct: 246 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 305

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  TF  LI  FVK+ ++ +A +L+D+M K     D   Y  +I G C + +L+ A  
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 365

Query: 227 LYSEMKGSGITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           ++  M      P+    + LI   C  +   E   L +E+ + R +   T+  N++++ L
Sbjct: 366 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGL 424

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  D A  + + M+                   V P+  ++ I+++ L K GKL+ A
Sbjct: 425 FQAGDCDMAQKIFKKMVSD----------------GVPPDIITYSILLDGLCKYGKLEKA 468

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +F  + +     +++ YN +I+G+C + ++E+ ++L   +   G KP      +M   
Sbjct: 469 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 528

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            CR+     A  L R+M+  G  P       LI+   + G    +   + +M   GF+ D
Sbjct: 529 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 588

Query: 464 IVCYSAAIGGLID 476
               S  I  L D
Sbjct: 589 ASTISMVINMLHD 601



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 29/351 (8%)

Query: 36  LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LIRCL + G   +A+ +L D ++R+    PN  +++ L++A  K   +   E    EM  
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                D +T + L+  +C   + D+A  +F  +I        V ++ L+  F K   V++
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             EL   M    +  N  T+  LI G  +    D A ++F KM   G   D   Y +++ 
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK  +LE AL ++  ++ S + PD    + +I      G+    V++ W+        
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK----VEDGWD-------- 505

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK-----GTVSPNTSSFD 328
           L C+  ++ +  N  I         MI G     +  E   +F+     GT+ PN+ +++
Sbjct: 506 LFCSLSLKGVKPNVII------YTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYN 558

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            +I   L+DG    +  L +EM   G + +    + +I+ L +  RLE+SY
Sbjct: 559 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 608



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 2/233 (0%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++   CF +      LI+       VEE   LF ++ + GL V N  +YN L++ L ++ 
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAG 428

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
             D+ +   K+M   G   D  T + LL   C  G+ +KAL VF  +       D + ++
Sbjct: 429 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 488

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           I++    K G+V+   +L   +    ++ N   +  +I GF +K   ++A  LF +M + 
Sbjct: 489 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 548

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           G   ++  Y+ +I    ++     + +L  EM+  G   D   +S +I    D
Sbjct: 549 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 601


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 173/633 (27%), Positives = 281/633 (44%), Gaps = 52/633 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR LG+ G  +   +L  +++REG  V      + +          D  ++   ++  +
Sbjct: 96  IIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMF 155

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +      LL V     +     S + E+   G   + V F+ ++ A  +  +   A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++E M  C++  +E TF  L+ GFV++  ++ AL+L  +M++ G +  +   +V+I G
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK  ++  AL    +    G  PD    S  +                           
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNG------------------------- 310

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                   L  NG +D A  +L  M++       G E          P+  ++  +IN L
Sbjct: 311 --------LCQNGHVDHALKVLGLMLQ------EGCE----------PDVYTYSTVINCL 346

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
             +G+L+ A  +  +M   GC+ +   +N LI  LC  N+LEE+ +L RE+   G  P  
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T N +   LC+  D   A+ L  +M+  G  P      +LI  LC  GK  +A   L +
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE 466

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G     V Y+  I GL   +R++ A E+F  +   G   + + +N +I GLC A+R
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A +L ++MI++GL P+  TYN ++  +CK GNI +A   L  M        DV+TY 
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT-ANGFEVDVVTYA 585

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TLI+GLC A R   A+ L   M  KG  P    +  +I  L + +  R AL  FR M E 
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV 645

Query: 635 GMKPDMFVFVALISAFLSELNP-PLAFEVLKEM 666
           G  PD F +  +         P   AF+ L EM
Sbjct: 646 GGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEM 678



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 270/574 (47%), Gaps = 28/574 (4%)

Query: 104 LTPLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKAC 155
           LTP   VY         +G FD    +  E+   G  V   +    + ++++    D A 
Sbjct: 86  LTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAF 145

Query: 156 ELIE-RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           +L+  ++D   ++ N + +  L+    + S++      + +M+  G   D   ++ +I  
Sbjct: 146 DLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDA 205

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTM 272
           LC+ +Q   A+ +  EM    + PD    + L+    +EG  E  L +K    +   +  
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT 265

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           ++  N ++      G +  A   +Q     + IAD G E          P+  +F   +N
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQ-----QEIAD-GFE----------PDRVTFSTFVN 309

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L ++G +D AL +   M Q GC  +V+ Y+ +I+ LCN+  LEE+  ++ +M +SG  P
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N++   LC    +  AL+L R++ V+G  P V    +LI  LCK G    A R  
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLF 429

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G  PD V Y+  I  L    ++  AL+L +++   GC    V YN II GLCK 
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           +R+ EAE++F++M   G+  +  T+N LI+G C +  ID A   + +M+  E   P+ +T
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI-SEGLQPNNVT 548

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y +++   C  G    A  +   M   G   + +T+  LI GLCK  R +AAL   R M+
Sbjct: 549 YNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMR 608

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            KGMKP    +  +I +     N   A  + +EM
Sbjct: 609 MKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREM 642



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 257/584 (44%), Gaps = 31/584 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKRE----GLCVPNNYSYNCLLEALCKSCSVDLVEM 87
            LG +   +GS   ++  +  FD V  +    G+   N   YN LL  L +   + L+E 
Sbjct: 124 GLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQA-NTEVYNHLLTVLAEGSKIKLLES 182

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFS 146
              EM   G   D  T   ++   C + Q   A+ +  E+       DE  F+ L+  F 
Sbjct: 183 AYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFV 242

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + G ++ A  L  RM +        T  VLI+G+ K  RV  AL    +    GF  D  
Sbjct: 243 EEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRV 302

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            +   + GLC+N  ++ AL++   M   G  PD    S +I    + GEL      + + 
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362

Query: 267 RDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAM-IKG------------EPIADVGVE 311
            D   +  T   N+++  L +   +++A +L + + +KG              +  VG  
Sbjct: 363 VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP 422

Query: 312 MLMIF------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            L +           +P+  +++I+I+ L   GKL  AL L +EM   GC Q+   YN +
Sbjct: 423 HLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTI 482

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           IDGLC   R+EE+ E+  +M+ +G      T N++   LC  + +  A  LV +M  +G 
Sbjct: 483 IDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGL 542

Query: 426 EPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           +P  V +N++L    CK G   +A   L  M   GF  D+V Y+  I GL   +R   AL
Sbjct: 543 QPNNVTYNSILT-HYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +L R +   G  P   AYN +I  L +     +A  LF EM   G  P   TY ++  G 
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661

Query: 545 CKSGN-IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           C+ G  I +A   L  M +     P+  ++  L +GL   G  D
Sbjct: 662 CRGGGPIKEAFDFLVEMADN-GFIPEFSSFRMLAEGLLNLGMDD 704


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 258/536 (48%), Gaps = 51/536 (9%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F E++    +   V F+ LL A +K  + D    L ERM +  I  +  ++ 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL +  KM K G+  D      ++ G C  K++  A+ L  +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
              P                               NT+T   N+++  L  +    +A  
Sbjct: 180 EYQP-------------------------------NTVTF--NTLIHGLFLHNKASEAVA 206

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M+                +G   P+  ++  ++N L K G +DLALSL ++M +  
Sbjct: 207 LIDRMVA---------------RG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V +Y  +ID LCN   + ++  L  EM+  G +P   T NS+ RCLC       A 
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V   + LI    K GK +EA +   +M++    PDI  YS+ I G 
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R+D A  +F  + +  C P+VV YN +I G CKA+RV E  +LF EM  +GL+ + 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN LI G  ++G+ D A     +M+  +   PD+ITY+ L+DGLC  G+ + A++++ 
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFE 489

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +++    P+  T+  +I G+CK  +       F  +  KG+KP++ ++  +IS F
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 24/558 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +N LL A+ K    DLV    + MQ+    YD Y+   L+  +C   Q   AL+
Sbjct: 77  LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +++  G+  + V  S LL  +     + +A  L+++M     + N  TF  LIHG  
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             ++  +A+ L D+M   G   D   Y  ++ GLCK   +++AL L  +M+   I  D  
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           I + +I +  +   +   +    E  ++ +    +  NS++R L + G    A  LL  M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+ +                ++PN  +F  +I+  +K+GKL  A  L+ EM +     ++
Sbjct: 317 IERK----------------INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F Y++LI+G C  +RL+E+  +   M      P   T N++ +  C+ + V   + L R+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 420 MRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M  +G     V +NTL I+ L + G    A +    MV +G  PDI+ YS  + GL    
Sbjct: 421 MSQRGLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +++ AL +F  +      PD+  YNI+I G+CKA +V +  DLF  +  KG+ P+V  Y 
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            +I+G+C+ G  ++A      M  KE G+ P+  TY TLI      G    +  L  EM 
Sbjct: 540 TMISGFCRKGLKEEADALFREM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597

Query: 598 EKGCAPNRITFMALITGL 615
             G   +  T   +I  L
Sbjct: 598 SCGFVGDASTISMVINML 615



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 69/403 (17%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            +L D KLD A+ LF EM Q   + ++  +N L+  +   N+ +    L   M+      
Sbjct: 54  NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 113

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             ++ N +  C CRR  +  AL ++ KM   G+EP +   + L+   C   +  EA   +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M    + P+ V ++  I GL    +   A+ L   + A GC PD+  Y  +++GLCK 
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233

Query: 513 -----------------------------------QRVAEAEDLFNEMITKGLIPSVATY 537
                                              + V +A +LF EM  KG+ P+V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLE----------------------------------K 563
           N LI   C  G    A   LS M+E                                  K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            S  PD+ TY++LI+G C+  R D+A  ++  M  K C PN +T+  LI G CK  R   
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  FR M ++G+  +   +  LI       +  +A ++ K+M
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 193/433 (44%), Gaps = 22/433 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  L D++   G C P+ ++Y  ++  LCK   +DL    LK+M+      D    T +
Sbjct: 203 EAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   CN    + AL++F E+ + G     V ++ L+     +G    A  L+  M +  I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  TF  LI  FVK+ ++ +A +L+D+M K     D   Y  +I G C + +L+ A  
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381

Query: 227 LYSEMKGSGITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           ++  M      P+    + LI   C  +   E   L +E+ + R +   T+  N++++ L
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGL 440

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  D A  + + M+                   V P+  ++ I+++ L K GKL+ A
Sbjct: 441 FQAGDCDMAQKIFKKMVSD----------------GVPPDIITYSILLDGLCKYGKLEKA 484

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +F  + +     +++ YN +I+G+C + ++E+ ++L   +   G KP      +M   
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            CR+     A  L R+M+  G  P       LI+   + G    +   + +M   GF+ D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604

Query: 464 IVCYSAAIGGLID 476
               S  I  L D
Sbjct: 605 ASTISMVINMLHD 617



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 29/351 (8%)

Query: 36  LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LIRCL + G   +A+ +L D ++R+    PN  +++ L++A  K   +   E    EM  
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                D +T + L+  +C   + D+A  +F  +I        V ++ L+  F K   V++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             EL   M    +  N  T+  LI G  +    D A ++F KM   G   D   Y +++ 
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK  +LE AL ++  ++ S + PD    + +I      G+    V++ W+        
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK----VEDGWD-------- 521

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK-----GTVSPNTSSFD 328
           L C+  ++ +  N  I         MI G     +  E   +F+     GT+ PN+ +++
Sbjct: 522 LFCSLSLKGVKPNVII------YTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYN 574

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            +I   L+DG    +  L +EM   G + +    + +I+ L +  RLE+SY
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 2/233 (0%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++   CF +      LI+       VEE   LF ++ + GL V N  +YN L++ L ++ 
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAG 444

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
             D+ +   K+M   G   D  T + LL   C  G+ +KAL VF  +       D + ++
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           I++    K G+V+   +L   +    ++ N   +  +I GF +K   ++A  LF +M + 
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           G   ++  Y+ +I    ++     + +L  EM+  G   D   +S +I    D
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 236/494 (47%), Gaps = 59/494 (11%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   +   Y+ +I GLCKN + + A +L+  MK    +P     + L+      G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 256 LT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           L     L +E+ + R  + ++   N ++  L   G I+ A    + M             
Sbjct: 61  LERAMALFQEMLDRRSHDVISF--NILVTGLCRAGKIETALEFFRKM------------- 105

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                   SPN  ++ ++I+ L K  ++  A+ L   M   GC  +V  Y  L+DGLC  
Sbjct: 106 ----DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 161

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           +++  ++E+LREM ++G  P   T NS+   LCR + V  AL L+R M  +G  P V   
Sbjct: 162 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 221

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEG--------------------------------- 459
             LI  LCK G+  +A   L DM+ +G                                 
Sbjct: 222 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 281

Query: 460 --FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
               PD+V YS+ I GL    R+D A  L   + + GC PDV+ Y+ +I GLCKA +V E
Sbjct: 282 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 341

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A DL+  M   G    V TY+ LI+G CK+G +D+A L L+RM+ +    P  +TY +LI
Sbjct: 342 AFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV-RMGTPPSTMTYNSLI 400

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGM 636
            GLC     D+AI L  EME   CAP+ +T+  LI G+C+ +R   AAL +F+ M + G+
Sbjct: 401 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGV 460

Query: 637 KPDMFVFVALISAF 650
            PD   +  L+   
Sbjct: 461 IPDHITYSILLEGL 474



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 242/524 (46%), Gaps = 52/524 (9%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+  C PN  +YN L++ LCK+   D  +   + M+         T   LL     +G+ 
Sbjct: 2   RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKL 61

Query: 118 DKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           ++A+++F E++D    D   F+IL+    + G+++ A E   +MDD     N  T+ VLI
Sbjct: 62  ERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLI 120

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K +RV +A++L + M   G + D   Y +++ GLCK  ++  A ++  EM  +G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LL 296
           P+      L+T                                            YN LL
Sbjct: 181 PN------LVT--------------------------------------------YNSLL 190

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             + +   ++D    M  +     +PN  ++  +I+ L K G++  A ++  +M   G  
Sbjct: 191 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 250

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++ +YN LI+GLC +++++ES  LLR     G KP   T +S+   LCR   +  A  L
Sbjct: 251 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 310

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  ++ +G  P V   + LI  LCK GK  EAF     M  +G   D+V YS  I GL  
Sbjct: 311 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCK 370

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             RVD A  L   +   G  P  + YN +I GLC    + EA +L  EM      PS  T
Sbjct: 371 AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 430

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           YN+LI+G C+   +D A L   + +      PD ITY+ L++GL
Sbjct: 431 YNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 196/439 (44%), Gaps = 33/439 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   L+  L   G +E A   F   K +  C PN  +Y+ L++ LCK+  V      L+ 
Sbjct: 81  SFNILVTGLCRAGKIETALEFFR--KMDDRCSPNVITYSVLIDGLCKANRVSQAVELLES 138

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M+  G   D  T T L+   C   +   A  V  E++D G V   V ++ LL    +   
Sbjct: 139 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V  A  L+  M       N  T+  LI G  K  RV  A  +   M   G   D  +Y++
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEG-ELTLLVKEIW 264
           +I GLCK  Q++ ++ L       GI PD    S +I     ++  DE   L L VK   
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              DV    +L ++++  L   G +D+A++L + M      ADV                
Sbjct: 319 CPPDV----ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV---------------- 358

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I+ L K G++D A  L   M ++G   +   YN+LI GLC+ N L+E+ EL+ E
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDV-VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           ME S   P+  T N +   +CR + V   AL+  ++M   G  P     ++L++ L K  
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL-KKS 477

Query: 444 KAMEAFRFLT--DMVQEGF 460
           K +   R L    MVQ G+
Sbjct: 478 KDLHELRHLVLDQMVQLGY 496



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 3/212 (1%)

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G  P++V Y++ I GL      D A ELF  + +  C P +V YN ++ GL +  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A  LF EM+ +     V ++N+L+ G C++G I+ A+    +M   +  SP+VITY+
Sbjct: 61  LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKM--DDRCSPNVITYS 117

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LIDGLC A R   A+ L   M+ +GC+P+ IT+  L+ GLCK  +  AA    R M + 
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  P++  + +L+           A  ++++M
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 169/624 (27%), Positives = 288/624 (46%), Gaps = 28/624 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +R  G  G ++EA    D  +R  L  C P+ YSYN ++  L +    +        M+D
Sbjct: 162 MRFYGRKGKIQEA---VDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKD 218

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                D YT T  ++ +C +G+   AL +   +   G     V +  ++  F ++G+ D+
Sbjct: 219 KKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDR 278

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL + M +C +  +  TF  L+H   KK  V ++ +LFDK+ K G   +   +++ I 
Sbjct: 279 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ 338

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDV 269
           GLCK   L+ A++L   +   G+ PD    + +I     +  +      L K +    + 
Sbjct: 339 GLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEP 398

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           N  T   NSI+      G +  A  +L+  +               FKG   P+  ++  
Sbjct: 399 NDFTY--NSIIDGYCKKGMVVDANRILKDAV---------------FKG-FKPDEFTYCS 440

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++N   +DG  D A+++F++    G   ++ +YN LI GLC    +  + +L+ EM E G
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            KP  +T N +   LC+   +  A +L+     +G  P +     L+   C+  K   A 
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +  M  +G  PD++ Y+  + GL    + +  +E+F+ +   GC P+++ YN II  L
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C +++V EA DL  EM +KGL P V ++  LI G+CK G++D A      M ++   S  
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
             TY  +I           A+ L++EM++ GC P+  T+  LI G CK            
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740

Query: 630 MMKEKGMKPDMFVFVALISAFLSE 653
              EKG  P +  F  +++    E
Sbjct: 741 ENIEKGFIPSLTTFGRVLNCLCVE 764



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 171/635 (26%), Positives = 299/635 (47%), Gaps = 56/635 (8%)

Query: 72  LLEALC-KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI--- 127
           L++  C K   V +  ++L +    G+ +  +T   +LQ     G+F++  ++ +E+   
Sbjct: 89  LVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN 148

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           +D+  + E V+   +  + + G++ +A +  ERMD  N   +  ++  +++  V+    +
Sbjct: 149 LDNTLL-EGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFN 207

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A +++ +M      SD   Y + I   C+  +   AL+L   M      P     S  +
Sbjct: 208 QAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNM------PVLGCFSNAV 261

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             C+       +V   +E  D +    L + ++   +    +     L+ A+ K   + +
Sbjct: 262 AYCT-------VVTGFYEFGDNDRARELFDEMLECCLC-PDVTTFNKLVHALCKKGFVLE 313

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                  + K  V PN  +F+I I  L K+G LD A+ L   +++ G   +V  YN +I 
Sbjct: 314 SERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVIC 373

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC  +R+ E+ E L +M   GF+P  FT NS+    C++  VV A  +++    +G +P
Sbjct: 374 GLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKP 433

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                  L+   C+ G   +A     D + +G  P I+ Y+  I GL     +  AL+L 
Sbjct: 434 DEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLM 493

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
            ++   GC PD+  YN+II+GLCK   +++A  L  + ITKG IP + TYN L++G+C+ 
Sbjct: 494 NEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQ 553

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
             +D A+  ++RM   +  +PDVITY TL++GLC   + ++ + ++  M EKGCAPN IT
Sbjct: 554 LKLDSAIELVNRMWS-QGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIIT 612

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI-------------------- 647
           +  +I  LC   +   A+     MK KG+ PD+  F  LI                    
Sbjct: 613 YNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGME 672

Query: 648 ----------------SAFLSELNPPLAFEVLKEM 666
                           SAF  +LN  +A  +  EM
Sbjct: 673 KQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM 707



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 248/551 (45%), Gaps = 55/551 (9%)

Query: 26  CFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           C + P    F  L+  L   G V E+  LFD+V + G+C PN +++N  ++ LCK  S+D
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVC-PNLFTFNIFIQGLCKEGSLD 347

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILL 142
                L  +   G   D  T   ++   C   +  +A    +++++ G+  ++  ++ ++
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSII 407

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
             + K G V  A  +++       + +E T+C L++GF +    D+A+ +F      G  
Sbjct: 408 DGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR 467

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
               +Y+ +I GLC+   +  ALQL +EM   G  PD                       
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD----------------------- 504

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           IW      T  L+ N + ++    G +  A +L+     G+ I           KG + P
Sbjct: 505 IW------TYNLIINGLCKM----GCLSDANHLI-----GDAIT----------KGCI-P 538

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++ +++   +  KLD A+ L   M   G   +V  YN L++GLC + + EE  E+ 
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF 598

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + M E G  P   T N++   LC  + V  A++L+ +M+ +G  P V     LI   CK 
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVC-YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           G    A+     M ++  +      Y+  I    +   + +AL LF ++  +GC PD   
Sbjct: 659 GDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYT 718

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y ++I G CK   V +      E I KG IPS+ T+  ++N  C    + +A+  +  M+
Sbjct: 719 YRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMV 778

Query: 562 EKESGSPDVIT 572
           +K+   PD + 
Sbjct: 779 QKDI-VPDTVN 788



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 173/397 (43%), Gaps = 53/397 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   YN L++ LC+   +      + EM + G   D +T   ++   C  G    A  +
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             + I  G + D   ++ L+  + +  ++D A EL+ RM    +  +  T+  L++G  K
Sbjct: 528 IGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            ++ ++ +++F  MT+ G A +   Y+ II  LC +K++  A+ L  EMK  G+TPD   
Sbjct: 588 TAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVS 647

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
              LIT     G+L                                 D AY L + M K 
Sbjct: 648 FGTLITGFCKVGDL---------------------------------DGAYGLFRGMEK- 673

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         +  VS  T++++III+   +   + +AL LF EM + GC  + + Y
Sbjct: 674 --------------QYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTY 719

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LIDG C +  + + Y+ L E  E GF P+  T   +  CLC    V  A+ ++  M V
Sbjct: 720 RVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLM-V 778

Query: 423 QGHEPWVKHNTLLIKELCKHGK-AMEAFRFLTDMVQE 458
           Q  +  V      I E  K G     A+ FL D V++
Sbjct: 779 Q--KDIVPDTVNTIFEADKKGHITYHAYEFLYDGVRD 813


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 181/643 (28%), Positives = 289/643 (44%), Gaps = 47/643 (7%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            G LI      G ++EA  +F   K   L  VP+    N LL+AL K   +DL     K 
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQF---------------------DKALSVFNEIIDH 130
           M +    +D  +   L+  +C  G                       D+AL +   +   
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 131 GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G V     +++L+    K   ++ A  L+  M+   +  +   + +LI G +K    D A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             L  +M   GF+ D  MYD  I  + K   +E A  L+  M   G+TP     + LI  
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              E  +     LLV+   + R++        + ++ + S+G +D AYN+++ M      
Sbjct: 395 FFREKNVRKGYELLVE--IKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEM------ 446

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           PN   +  +I T L+  +   A+ + +EM + G   + F YN+L
Sbjct: 447 ----------GASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I GL  + +++E+   L EM E+GFKP  FT  +         +   A   V++M   G 
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P     T LI E CK GK +EA      MV++G L D   Y+  + GL+   +V+ A E
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE 616

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +F ++   G  PDV +Y  +I G  K   + +A  +F+EM+  GL  +V  YN+L+ G+C
Sbjct: 617 IFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +SG I++A   L  M  K    P+ +TY T+IDG C +G   +A  L++EM+ KG  P+ 
Sbjct: 677 RSGEIEKAKELLDEMSGK-GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
             +  L+ G C+ +    A+  F    EKG       F ALI+
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFE-TNEKGCASSSAPFNALIN 777



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 293/669 (43%), Gaps = 60/669 (8%)

Query: 40  LGSVGL-VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           LG+  L V+EA  L   +  +GL VP+  SYN L++ LCK   ++  +  L EM   G  
Sbjct: 254 LGTATLNVDEALELKKSMSCKGL-VPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLF 312

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
            D    + L+         D A  + +E++ HG+ +D  ++   +   SK G ++KA  L
Sbjct: 313 ADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKAL 372

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            + M    +    + +  LI GF ++  V K  +L  ++ K         Y   + G+C 
Sbjct: 373 FDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCS 432

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTL 274
           +  L+ A  +  EM  SG  P+  I + LI +    S  G+   ++KE+ E + +   T 
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMRE-QGIAPDTF 491

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NS++  L     +D+A + L  M++              FK    P+  ++   I+  
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENG------------FK----PDAFTYGAFISGY 535

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           ++ G+   A    +EM + G + N  L   LI+  C   ++ E+    R M E G     
Sbjct: 536 IEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +   L +   V  A  +  +MR +G  P V     LI    K G   +A     +
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MVQ G   +++ Y+  +GG      ++ A EL  ++   G  P+ V Y  II G CK+  
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC------------------ 556
           +AEA  LF+EM  KGL+P    Y  L++G C+  ++++A+                    
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNAL 775

Query: 557 ----------------LSRMLE---KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                           ++R+++    + G P+ +TY  +ID LC  G  + A  L++ M+
Sbjct: 776 INWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           +    P  IT+ +L+ G  K  R       F  +   G++PD  ++  +I+AFL E    
Sbjct: 836 KANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTT 895

Query: 658 LAFEVLKEM 666
            A  +L +M
Sbjct: 896 KALVLLDQM 904



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/668 (23%), Positives = 282/668 (42%), Gaps = 66/668 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E+A  L  ++   GL   +N +Y+ L++ L K  + D     + EM  +G+  D     
Sbjct: 296 LEDAKSLLVEMNSVGL-FADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYD 354

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW--------------------------------- 132
             + V    G  +KA ++F+ +I  G                                  
Sbjct: 355 YFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKR 414

Query: 133 ---VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
              +  + +   +      G++D A  +++ M     R N   +  LI  F++KSR   A
Sbjct: 415 NIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDA 474

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           +++  +M + G A D   Y+ +I GL K K+++ A     EM  +G  PD       I+ 
Sbjct: 475 VRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG 534

Query: 250 CSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             + GE     K + E  +   +   +LC  ++      G + +A +  ++M++   + D
Sbjct: 535 YIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGD 594

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                             ++ +++N L+K+GK++ A  +F EM   G   +VF Y  LID
Sbjct: 595 ----------------AKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLID 638

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G      ++++  +  EM ++G        N +    CR  ++  A  L+ +M  +G  P
Sbjct: 639 GFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPP 698

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                  +I   CK G   EAF+   +M  +G +PD   Y+  + G   +  V+ A+ +F
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 758

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL----IPSVATYNLLING 543
            +    GC      +N +I+ + K  +     D+ N ++         P+  TYN++I+ 
Sbjct: 759 -ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDY 817

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK GN++ A      M +K +  P VITYT+L++G    GR  +   +++E+   G  P
Sbjct: 818 LCKEGNLEAAKELFHHM-QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEP 876

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEK-----GMKPDMFVFVALISAFLSELNPPL 658
           + I +  +I    K      ALV    M  K     G K  +    AL+S F       +
Sbjct: 877 DNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 936

Query: 659 AFEVLKEM 666
           A +V++ M
Sbjct: 937 AEKVVENM 944



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 269/591 (45%), Gaps = 43/591 (7%)

Query: 112 CNSGQFDKALSVFNEIIDHGW-------------------VDEHV--FSILLVAFSKWGE 150
           CN G  +KA SV   +I+  W                    D+ V  F IL+  + + G 
Sbjct: 108 CNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGF 167

Query: 151 VDKACELIERMDDCNIRLNEK-TFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           +D+A  +     D ++ L      C  L+   +K++R+D    ++  M +     D   Y
Sbjct: 168 LDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSY 227

Query: 209 DVIIGGLCKNKQLEMA----LQLYSEMKGSGITPDFEILSKLITSCS----DEGELTLLV 260
           +++IG  C++  +++A    L+   E+  + +  D  +  K   SC           LL+
Sbjct: 228 EMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLI 287

Query: 261 KEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPI-ADVGVEMLMI 315
             + + +   D  ++ +  NS+  +   N     AY+ L+  ++KG    A  G+   M+
Sbjct: 288 DGLCKQKRLEDAKSLLVEMNSV-GLFADN----VAYSILIDGLLKGRNADAANGLVHEMV 342

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G  S +   +D  I  + K+G ++ A +LF  M   G       Y +LI+G      +
Sbjct: 343 SHG-FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNV 401

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            + YELL E+++     + +T  +  + +C   D+ GA N+V++M   G  P V   T L
Sbjct: 402 RKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTL 461

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           IK   +  +  +A R L +M ++G  PD  CY++ I GL   K++D A     ++  +G 
Sbjct: 462 IKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGF 521

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD   Y   ISG  +A   A A+    EM+  G+IP+      LIN +CK G + +A  
Sbjct: 522 KPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACS 581

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M+E +    D  TYT L++GL   G+ +DA  +++EM  KG AP+  ++  LI G 
Sbjct: 582 AFRSMVE-QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            K    + A   F  M + G+  ++ ++  L+  F        A E+L EM
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 162/669 (24%), Positives = 271/669 (40%), Gaps = 70/669 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + R       L  ++V     + P    + I  +   G +E+A  LFD +   G+  P
Sbjct: 325 LLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV-TP 383

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y  L+E   +  +V      L E++        YT    ++  C+SG  D A ++ 
Sbjct: 384 GARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIV 443

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G   +  +++ L+  F +      A  +++ M +  I  +   +  LI G  K 
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++D+A     +M ++GF  DA  Y   I G  +  +   A +   EM   G+ P+  + 
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + LI     +G   E     + + E     D  T T+L N     LV NG ++ A  +  
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG----LVKNGKVNDAEEIFH 619

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M +G+ IA               P+  S+  +I+   K G +  A S+F EM Q G   
Sbjct: 620 EM-RGKGIA---------------PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTS 663

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           NV +YN L+ G C S  +E++ ELL EM   GF P   T  ++    C+  D+  A  L 
Sbjct: 664 NVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLF 723

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEA-------------------------FRF- 451
            +M+++G  P     T L+   C+      A                         F+F 
Sbjct: 724 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFG 783

Query: 452 ----LTDMVQ---EGFL-----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
                TDM+    +G       P+ V Y+  I  L     ++ A ELF  +      P V
Sbjct: 784 KTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTV 843

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y  +++G  K  R +E   +F+E+I  G+ P    Y+++IN + K G   +A++ L +
Sbjct: 844 ITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQ 903

Query: 560 MLEKESGSP----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           M  K +        + T   L+ G    G  + A  +   M      P+  T + LI   
Sbjct: 904 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINES 963

Query: 616 CKCDRPRAA 624
           C     R A
Sbjct: 964 CISSNQRMA 972


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 271/567 (47%), Gaps = 21/567 (3%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           T T LL     + + +K+  VF  +      D ++FS  + AF K G+V+ A +L   M+
Sbjct: 214 TCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 273

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  N  T+  LIHG  K   +D+A +  +KM K G  +    Y V+I GL K ++  
Sbjct: 274 KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 333

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A  +  E    G TP+  + + LI      G L   L ++     + +N  ++  NSI+
Sbjct: 334 EANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 393

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +     G ++QA  +L+ M+                +G  S N  +F  II+ L  + + 
Sbjct: 394 QGFCKIGQMEQAECILEEMLS---------------RG-FSINPGAFTTIIHWLCMNSRF 437

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + AL   REM       N  L   L+ GLC   +  ++ EL   + E GF     T N++
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 497

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC+  ++  A+ L++KM  +G     + +NT LI   CK GK  E F+   +MV++G
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT-LISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   Y+  I G+  I ++D A+ L+ +  +    P+V  Y ++I G CKA ++ E E
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF E++T+ L  +   YN LI  +C++GN  +A      M  K    P   TY++LI G
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK-GIPPTTATYSSLIHG 675

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +C  GR +DA  L +EM ++G  PN + + ALI G CK  +    +   + M    + P+
Sbjct: 676 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 735

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I  +    +   A ++L EM
Sbjct: 736 KITYTVMIDGYSKSGDMKTAAKLLHEM 762



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 282/561 (50%), Gaps = 30/561 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE-MQDYGWGYDKY 102
           G VE+A  LF  +++ G+  PN  +YN L+  LCK  ++D    R KE M   G      
Sbjct: 260 GKVEDAIQLFFDMEKLGVS-PNVVTYNNLIHGLCKHGNLDEA-FRFKEKMVKDGVNATLI 317

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T + L+       +F++A SV  E ++ G+  +E V++ L+  + K G +  A  +   M
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               I  N  T   +I GF K  ++++A  + ++M   GF+ +   +  II  LC N + 
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
           E AL+   EM    + P+  +L+ L+     EG+ +  V E+W    ++      +  N+
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV-ELWFRLLEKGFGANLVTTNA 496

Query: 279 IMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLM------------------IFKGT 319
           ++  L   G++ +A  LL+ M+ +G  +  +    L+                  + K  
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + P+T +++++I+ + + GKLD A++L+ E      + NV+ Y  +IDG C ++++EE  
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L  E+     +      N++ R  CR  + V A  L   MR +G  P     + LI  +
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+  +A   + +M +EG LP++VCY+A IGG   + ++D  + + +++ ++   P+ 
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y ++I G  K+  +  A  L +EM+ KG++P   TYN+L NG+CK G I++       
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDY 796

Query: 560 MLEKESGSP-DVITYTTLIDG 579
           M   + G P D ITYTTL+ G
Sbjct: 797 M--SQEGLPLDEITYTTLVHG 815



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 242/580 (41%), Gaps = 101/580 (17%)

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           D C  R   +++CVL+   +    V  A  L  ++              ++ G  KN+ +
Sbjct: 104 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLP--------VLFGDPKNRHI 155

Query: 222 EMALQL--YSEMKGSGIT-PDFEILSKLI-TSCSDEGELTLL-VKEIWEDRDVNTMTLLC 276
           E+A  +   +E+  SG+     ++L  +  T   + G    + V     ++ V      C
Sbjct: 156 EIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTC 215

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
             ++  LV    ++++Y + + M +G                 VSP+   F   IN   K
Sbjct: 216 TFLLSSLVKANELEKSYWVFETMRQG-----------------VSPDVYLFSTAINAFCK 258

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            GK++ A+ LF +M ++G   NV  YNNLI GLC    L+E++    +M + G   T  T
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            + +   L + +    A +++++   +G  P  V +NT LI   CK G   +A R   DM
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT-LIDGYCKMGNLGDALRIRGDM 377

Query: 456 VQEGFLPDIVCYSAAIGGLIDI-----------------------------------KRV 480
           V +G  P+ V  ++ I G   I                                    R 
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + AL   R++      P+      ++ GLCK  + ++A +L+  ++ KG   ++ T N L
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 497

Query: 541 INGWCKSGNIDQAMLCLSRMLE----------------------------------KESG 566
           I+G CK+GN+ +A+  L +MLE                                  K+  
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD  TY  LI G+C  G+ D+A+ LWNE + +   PN  T+  +I G CK D+      
Sbjct: 558 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 617

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F  +  + ++ +  V+  LI A+    N   AF++  +M
Sbjct: 618 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EE   LF ++  + L + N+  YN L+ A C++ +         +M+  G      T +
Sbjct: 612 IEEGEKLFTELLTQNLEL-NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   CN G+ + A  + +E+   G +   V ++ L+  + K G++DK   +++ M   
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           +I  N+ T+ V+I G+ K   +  A +L  +M   G   D   Y+V+  G CK  ++E  
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
            ++   M   G+  D    + L+        LT
Sbjct: 791 FKICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 295/635 (46%), Gaps = 31/635 (4%)

Query: 46  VEEANMLFDQVKREG--LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           VEEA  L   +  +G   C PN  +YN +++ LCK+ +VD  E  L+ M D G   D  T
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C +   D+A  V   +ID G   + V ++ ++    K   VD+A  +++ M 
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI 296

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D  ++ +  T+  +I G  K   VD+A  +   M       D   Y+ +I G     + +
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWK 356

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--------LLVKEIWEDRDVNTMTL 274
             ++   EM   G+ PD    S L+      G+ T        ++ K I  +  +  + L
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416

Query: 275 L----------CNSIMRILVSNGSIDQAY--NLLQAMIKGEPIADVGVEMLMIF----KG 318
                         ++ ++V+NG     Y  N++      + + D   E + IF    + 
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMID---EAMHIFSRMSQH 473

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            +SP+  ++ I+I+ L K G++D A+  F +M   G   N  ++N+L+ GLC  +R E++
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKA 533

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL  EM + G +P     N++   LC    V+ A  L+  M   G  P V     LI  
Sbjct: 534 EELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C  G+  EA + L  MV  G  PD++ Y   + G     R+D A  LFR++   G  P 
Sbjct: 594 HCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPG 653

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V Y+ I+ GL   +R +EA++L+  MI  G    + TYN+++NG CK+  +D+A     
Sbjct: 654 AVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQ 713

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            +  K+   P++IT+T +ID L   GR  DA+ L+  +   G  PN +T+  ++  + + 
Sbjct: 714 SLCSKDL-RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQE 772

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                    F  M++ G  PD  +  A+I + L  
Sbjct: 773 GLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 169/621 (27%), Positives = 277/621 (44%), Gaps = 34/621 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY---DKYTLTPLLQVYCNSGQFD 118
           C+PN  S N LL+ LC    V+     L  M + G G    +  T   ++   C +   D
Sbjct: 157 CMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVD 216

Query: 119 KALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           +A  V   +ID G  +D   +S ++    K   VD+A  +++ M D  ++ +  T+  +I
Sbjct: 217 RAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 276

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K   VD+A  +   M   G   D   Y+ II GLCK + ++ A  +   M    + 
Sbjct: 277 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK 336

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           PD +  + LI      GE   +V+ + E      D DV T +LL    +  L  NG   +
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL----LDYLCKNGKCTE 392

Query: 292 AYNLLQAMIKG--EP-----------------IADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           A  +   MI+   +P                 IAD+   + ++    +SPN   F+I++ 
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K   +D A+ +F  M+Q G   +V  Y  LID LC   R++++     +M   G  P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                NS+   LC       A  L  +M  QG  P V     ++  LC  G+ M A R +
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M + G  P+++ Y+  IGG     R D A +L   + + G  PD+++Y+ ++ G CK 
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+  A  LF EM+ KG+ P   TY+ ++ G   +    +A      M+ K     D+ T
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI-KSGQQWDIYT 691

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y  +++GLC     D+A  ++  +  K   PN ITF  +I  L K  R + A+  F  + 
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIP 751

Query: 633 EKGMKPDMFVFVALISAFLSE 653
             G+ P++  +  ++   + E
Sbjct: 752 SHGLVPNVVTYCIMMKNIIQE 772



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/639 (25%), Positives = 292/639 (45%), Gaps = 25/639 (3%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQ 93
            L  C   +G +E     F  + + G  V N    N LL  LC +  VD  +++ L+ M 
Sbjct: 95  ILTGCFCRLGRIEHGFAAFGLILKTGWRV-NEVVINQLLNGLCDAKRVDEAMDILLRRMP 153

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW----VDEHVFSILLVAFSKWG 149
           ++G   +  +   LL+  CN  + ++AL + + + + G      +   ++ ++    K  
Sbjct: 154 EFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQ 213

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VD+A  +++ M D  ++L+  T+  +I G  K   VD+A  +   M   G   D   Y+
Sbjct: 214 AVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 273

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDR 267
            II GLCK + ++ A  +   M   G+ PD    + +I   C  +  +    V +   D+
Sbjct: 274 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK 333

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           DV       N ++   +S G   +    L+ M                +   + P+  ++
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM----------------YARGLDPDVVTY 377

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            ++++ L K+GK   A  +F  M + G   NV +Y  L+ G      + +  +LL  M  
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVA 437

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           +G  P ++  N +     ++  +  A+++  +M   G  P V    +LI  LCK G+  +
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M+ +G  P+ V +++ + GL  + R + A ELF ++   G  P+VV +N I+ 
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LC   +V  A+ L + M   G+ P+V +YN LI G C +G  D+A   L  M+      
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV-GLK 616

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y TL+ G C  GR D+A  L+ EM  KG  P  +T+  ++ GL    R   A   
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  M + G + D++ +  +++          AF++ + +
Sbjct: 677 YLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSL 715



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 180/649 (27%), Positives = 283/649 (43%), Gaps = 47/649 (7%)

Query: 41  GSVGLVEEANMLFDQV---KREGLCVPNNYSYNCLLEALCKSCSVDLVEM--RLKEMQDY 95
           GS+G +++A  LFD++    R       N+  N +  A C S S   V +  R+      
Sbjct: 26  GSLG-IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN 84

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D  T + L   +C  G+ +   + F  I+  GW V+E V + LL        VD+A
Sbjct: 85  KVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEA 144

Query: 155 CE-LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS---DAAMYDV 210
            + L+ RM +     N  +   L+ G   + RV++AL+L   M + G  +   +   Y+ 
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWE 265
           II GLCK + ++ A  +   M   G+  D    S +I         D  E  L   +   
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL---QHMI 261

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------- 308
           D+ V    +  N+I+  L    ++D+A  +LQ MI      DV                 
Sbjct: 262 DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 321

Query: 309 ---GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
              GV   MI K  V P+  +++ +I+  L  G+    +    EM   G   +V  Y+ L
Sbjct: 322 RADGVLQHMIDK-DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL 380

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           +D LC + +  E+ ++   M   G KP       +      R  +    +L+  M   G 
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440

Query: 426 EPWVKHNTLLIKELCKHG-KAM--EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            P   +N +    LC +  KAM  EA    + M Q G  PD+V Y   I  L  + RVD 
Sbjct: 441 SP---NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+  F  +   G  P+ V +N ++ GLC   R  +AE+LF EM  +G+ P+V  +N ++ 
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C  G +  A   +  M E+    P+VI+Y TLI G C+AGR D+A  L + M   G  
Sbjct: 558 NLCNEGQVMVAQRLIDSM-ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK 616

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           P+ I++  L+ G CK  R   A   FR M  KG+ P    +  ++    
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 267/570 (46%), Gaps = 44/570 (7%)

Query: 117 FDKALSVFNEIIDHGW-VDEHVFSILL-------------VAFSKWGEVDKACELIERMD 162
            D AL +F+E++ H        F+ LL             +A S +  + +AC    R D
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C       T+ +L   F +  R++     F  + K+G+  +  + + ++ GLC  K+++
Sbjct: 90  LC-------TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVD 142

Query: 223 MALQ-LYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTM--TLLC 276
            A+  L   M   G  P+    + L+    +E    E   L+  + ED   N     +  
Sbjct: 143 EAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTY 202

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+I+  L    ++D+A  +LQ MI      D GV++ ++          ++  II+ L K
Sbjct: 203 NTIIDGLCKAQAVDRAEGVLQHMI------DKGVKLDVV----------TYSTIIDGLCK 246

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
              +D A  + + M   G   +V  YN +IDGLC +  ++ +  +L+ M + G KP   T
Sbjct: 247 AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 306

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC+ Q V  A  +++ M  +  +P ++    LI      G+  E  R L +M 
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY 366

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD+V YS  +  L    +   A ++F  +   G  P+V  Y I++ G      +A
Sbjct: 367 ARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIA 426

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +  DL + M+  G+ P+   +N+++  + K   ID+AM   SRM  +   SPDV+TY  L
Sbjct: 427 DLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM-SQHGLSPDVVTYGIL 485

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID LC  GR DDA++ +N+M   G  PN + F +L+ GLC  DR   A   F  M ++G+
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV 545

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +P++  F  ++    +E    +A  ++  M
Sbjct: 546 RPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 234/503 (46%), Gaps = 21/503 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YNCL+     +     V  RL+EM   G   D  T + LL   C +G+  +A  +
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F  +I  G   +  ++ ILL  ++  G +    +L++ M    I  N   F +++  + K
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K+ +D+A+ +F +M++ G + D   Y ++I  LCK  +++ A+  +++M   G+TP+  +
Sbjct: 457 KAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516

Query: 243 LSKLITS-CS-DEGE-LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + L+   C+ D  E    L  E+W D+ V    +  N+IM  L + G +  A  L+ +M
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMW-DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            +      VGV           PN  S++ +I      G+ D A  L   M  +G   ++
Sbjct: 576 ER------VGVR----------PNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ L+ G C + R++ +Y L REM   G  P   T +++ + L   +    A  L   
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G +  +    +++  LCK     EAF+    +  +   P+I+ ++  I  L    R
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              A++LF  I +HG  P+VV Y I++  + +   + E ++LF  M   G  P     N 
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799

Query: 540 LINGWCKSGNIDQAMLCLSRMLE 562
           +I      G I +A   LS++ E
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDE 822



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 31/391 (7%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            +++EA  +F ++ + GL  P+  +Y  L++ALCK   VD   ++  +M + G   +   
Sbjct: 458 AMIDEAMHIFSRMSQHGLS-PDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMD 162
              L+   C   +++KA  +F E+ D G     VF + ++      G+V  A  LI+ M+
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +R N  ++  LI G     R D+A QL D M   G   D   YD ++ G CK  +++
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSC------SDEGELTLLVKEIWEDRDVNTMTLLC 276
            A  L+ EM   G+TP     S ++         S+  EL L + +  +  D+ T  ++ 
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIIL 696

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---FKGT-------------- 319
           N     L     +D+A+ + Q++   +   ++    +MI   FKG               
Sbjct: 697 NG----LCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPS 752

Query: 320 --VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             + PN  ++ I++  ++++G LD   +LF  M + GC  +  + N +I  L     +  
Sbjct: 753 HGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMR 812

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +   L +++E  F     T + +     R +
Sbjct: 813 AGAYLSKIDEMNFSLEASTTSLLISLFSREE 843



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 2/219 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R     G ++ A  LF ++ R+G+  P   +Y+ +L+ L  +      +     M   
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGV-TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS 683

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G  +D YT   +L   C +   D+A  +F  +         + F+I++    K G    A
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L   +    +  N  T+C+++   +++  +D+   LF  M KSG   D+ M + II  
Sbjct: 744 MDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           L    ++  A    S++     + +    S LI+  S E
Sbjct: 804 LLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSRE 842


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 305/634 (48%), Gaps = 24/634 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           L+R L   G +E A  L D+VK  G C+ P+   YN  ++   K+ SVD+      E++ 
Sbjct: 217 LVRALAREGQMEPALALVDEVK--GSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKA 274

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDK 153
           +G   D  + T ++ V C +G+  +A  +F ++     V   + ++ +++ +      D 
Sbjct: 275 HGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDD 334

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+ER+ +     +  +F  ++    KK +VD+AL LFD M K     + + Y++II 
Sbjct: 335 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIID 393

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNT 271
            LC   ++  A ++  EM+ +G+ P+   ++ ++     +++ E    + E   +R  N 
Sbjct: 394 MLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP 453

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++   S++  L   G ID AY L + M+      D G +           N   +  +I
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKML------DAGHDA----------NPIIYTSLI 497

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                 G+ +    +++EM + G   ++ L N  +D +  +  +E+   +  +M+  GF 
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + + +   L +        N+ + M  QG     +    ++  LCK GK  +A+  
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M  +   P +  Y + + GL  I R+D A  LF +  + G   +V+ Y+ +I G  K
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGK 677

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  +  EM+ KGL P+V T+N L++   K+  ID+A++C   M E +  SP+  
Sbjct: 678 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC-SPNTY 736

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY+ LI+GLC   + + A + W EM+++G  PN +T+  +I+GL K      A   F   
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF 796

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           K  G  PD   F ALI    +   P  A++V +E
Sbjct: 797 KTNGGIPDSASFNALIEGMSNANRPMEAYQVFEE 830



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 308/641 (48%), Gaps = 33/641 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+R  ++ P   L  D VK  C + P  + +   I C G  G V+ A   F ++K  GL 
Sbjct: 221 LAREGQMEPALALV-DEVKGSC-LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGL- 277

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P++ SY  ++  LCK+  +   E    +M+        Y    ++  Y ++ +FD A  
Sbjct: 278 RPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYK 337

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +   + + G +   V F+ +L    K  +VD+A  L + M   + + N  T+ ++I    
Sbjct: 338 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLC 396

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              RV++A ++ D+M  +G   +    ++++  LCK  QLE A +++      G  P+  
Sbjct: 397 MAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSV 456

Query: 242 ILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
               LI     +G++     L  K +    D N   ++  S++R    +G  +  + + +
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKEDGHKIYK 514

Query: 298 AMIK--GEP-IADVGVEMLMIFK-GTVS---------------PNTSSFDIIINTLLKDG 338
            MI+  G P +  +   M  +FK G V                P+  S+ I+I+ L K G
Sbjct: 515 EMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAG 574

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +     ++F+ M+Q G   +   YN ++DGLC S +++++YE+L EM+     PT  T  
Sbjct: 575 QARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYG 634

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+   L +   +  A  L  + + +G E  V   + LI    K G+  EA+  L +M+++
Sbjct: 635 SIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK 694

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P++  +++ +  L+  + +D AL  F+ +    C P+   Y+I+I+GLC+ Q+  +A
Sbjct: 695 GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 754

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              + EM  +GLIP+V TY  +I+G  K GNI  A     R  +   G PD  ++  LI+
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER-FKTNGGIPDSASFNALIE 813

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           G+  A RP +A  ++ E   +GC  N  T ++L+  L K +
Sbjct: 814 GMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 166/661 (25%), Positives = 290/661 (43%), Gaps = 71/661 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN +L  L    +   +E  L+EM   G+G        L+     S + + A  V   +
Sbjct: 110 AYNAVLPFLSHDLAA--LEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +      +++L+ A ++  + ++A EL+ +M D    ++   F  L+    ++ ++
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEIL 243
           + AL L D++  S    D  +Y+V I    K   ++MA + + E+K  G+ PD   +  +
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDV------NTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             ++      GE   L  ++  +RDV      NTM +   S  R        D AY LL+
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERF-------DDAYKLLE 340

Query: 298 AM------------------IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +                  +  +   D  + +  + K    PN S+++III+ L   G+
Sbjct: 341 RLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGR 400

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A  +  EM   G   N+   N ++D LC +N+LEE++ +     E G  P   T  S
Sbjct: 401 VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCS 460

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L ++  +  A  L  KM   GH+      T LI+    HG+  +  +   +M++ G
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD+   +  +  +     V+    +F D+ + G  PDV +Y+I+I GL KA +  E  
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL---------------------- 557
           ++F  M  +G       YN +++G CKSG +D+A   L                      
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 558 --------SRMLEKESGSP----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
                   + ML +E+ S     +VI Y++LIDG    GR D+A ++  EM +KG  PN 
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            T+ +L+  L K +    AL+ F+ MKE    P+ + +  LI+          AF   +E
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQE 760

Query: 666 M 666
           M
Sbjct: 761 M 761



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 245/533 (45%), Gaps = 21/533 (3%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  S  +   ++ CLG    V+EA  LFD +K++    PN  +YN +++ LC +  V+  
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA--KPNISTYNIIIDMLCMAGRVNEA 404

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
                EM+  G   +  ++  ++   C + Q ++A  +F    + G     V +  L+  
Sbjct: 405 YKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG 464

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G++D A  L E+M D     N   +  LI  F    R +   +++ +M + G   D
Sbjct: 465 LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD 524

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
             + +  +  + K  ++E    ++ +MK  G  PD    S LI   +  G+   T  + +
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQ 584

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
               +         N+++  L  +G +D+AY +L+ M                    V P
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH----------------VHP 628

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
             +++  I++ L K  +LD A  LF E    G   NV LY++LIDG     R++E+Y +L
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM + G  P  +T NS+   L + +++  AL   + M+     P     ++LI  LC+ 
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  +AF F  +M ++G +P++V Y+  I GL  +  +  A  LF     +G  PD  ++
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           N +I G+  A R  EA  +F E   +G   +V T   L++   K+  ++QA +
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAI 861


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 301/635 (47%), Gaps = 26/635 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR     G V+ A  L D++K   L  P+   YN  ++   K+  VD+      EM+  
Sbjct: 241 LIRVFAREGRVDAALSLLDEMKSNSL-EPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKAN 299

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKA 154
           G   D  T T ++ V C + + ++A+ +F  +  +  V   + ++ +++ +   G+ + A
Sbjct: 300 GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDA 359

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ER        +  ++  ++    +K +VD+AL+ F++M K     + + Y+++I  
Sbjct: 360 YSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDM 418

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT--- 271
           LCK  +LE AL +   MK +G+ P+   ++ ++        L      I+E  D  T   
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-SIFEGLDHKTCRP 477

Query: 272 -MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                C S++  L  +G +D+AY L + M+    I                PN   +  +
Sbjct: 478 DAVTYC-SLIEGLGRHGRVDEAYKLYEQMLDANQI----------------PNAVVYTSL 520

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K G+ +    ++ EM ++GC  ++ L N  +D +  +  +E+   L +E++  GF
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   +   +   L +      A  L   M+ QG     +    +I   CK GK  +A++
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M  +G  P +V Y + I GL  I R+D A  LF +  + G   +VV Y+ +I G  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  R+ EA  +  E++ KGL P+V T+N L++   K+  I +A++C   M + +  +P+ 
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC-TPNY 759

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           ITY+ LI GLC   + + A + W EM+++G  PN  T+  +I+GL K      A   F  
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            KEKG   D  ++ A+I    +      A+ + +E
Sbjct: 820 FKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 170/637 (26%), Positives = 302/637 (47%), Gaps = 25/637 (3%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           F Q  R+    P   +Y  L+ AL  S   D +    ++MQ+ G+  + +  T L++V+ 
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
             G+ D ALS+ +E+  +    D  ++++ +  F K G+VD A +    M    + L++ 
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDV 306

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  +I    K  R+++A++LF+ M ++     A  Y+ +I G     + E A  L    
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-DRDVNTMTLLCNSIMRILVSNGSID 290
           +  G  P     + +++    +G++   +K+  E  +D        N ++ +L   G ++
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 291 QAYNLLQAMIKGEPIADVGVEMLM---------------IFKG----TVSPNTSSFDIII 331
            A  +  AM       +V    +M               IF+G    T  P+  ++  +I
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L + G++D A  L+ +M     + N  +Y +LI       R E+ +++  EM   G  
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P    LN+   C+ +  ++     L ++++  G  P  +  T+LI  L K G A EA+  
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M ++G + D   Y+  I G     +V+ A +L  ++   G  P VV Y  +I GL K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  LF E  +KG+  +V  Y+ LI+G+ K G ID+A L +  +++K   +P+V 
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVY 725

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           T+  L+D L  A    +A++ +  M++  C PN IT+  LI GLCK  +   A V ++ M
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM 785

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLA---FEVLKE 665
           +++G KP++F +  +IS      N   A   FE  KE
Sbjct: 786 QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 290/620 (46%), Gaps = 53/620 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M  +L +A R+     L + + +++      A   +I   G  G  E+A  L ++ +R+G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C+P+  SYNC+L  L +   VD    + +EM+      +  T   ++ + C +G+ + A
Sbjct: 371 -CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETA 428

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + + D G     +  +I++    K   +D AC + E +D    R +  T+C LI G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             +  RVD+A +L+++M  +    +A +Y  +I    K  + E   ++Y+EM   G +PD
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                             LL N+ M  +   G I++   L Q  
Sbjct: 549 L---------------------------------LLLNTYMDCVFKAGEIEKGRALFQ-- 573

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I ++G            P+  S+ I+I+ L+K G    A  LF  M + GC+ + 
Sbjct: 574 ----EIKNLGF----------IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +IDG C S ++ ++Y+LL EM+  G +PT  T  S+   L +   +  A  L  +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            + +G E  V   + LI    K G+  EA+  + +++Q+G  P++  ++  +  L+  + 
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  AL  F+ +    C P+ + Y+I+I GLCK ++  +A   + EM  +G  P+V TY  
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G  K+GNI +A     +  EK  G  D   Y  +I+GL  A R  DA  L+ E   K
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEK-GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858

Query: 600 GCAPNRITFMALITGLCKCD 619
           GC+    T + L+  L K +
Sbjct: 859 GCSIYTKTCVVLLDSLHKAE 878



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 264/584 (45%), Gaps = 52/584 (8%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S+L R RR   +      VV   C +S         CLG  G V+EA   F+++K++   
Sbjct: 361 SLLERQRRKGCI----PSVVSYNCILS---------CLGRKGQVDEALKKFEEMKKDA-- 405

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN +++ LCK+  ++   +    M+D G   +  T+  ++   C + + D A S
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465

Query: 123 VFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +F E +DH     D   +  L+    + G VD+A +L E+M D N   N   +  LI  F
Sbjct: 466 IF-EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R +   +++++M + G + D  + +  +  + K  ++E    L+ E+K  G  PD 
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584

Query: 241 EILSKLITSCSDEG------ELTLLVKE---IWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              + LI      G      EL   +KE   + + R  NT       ++     +G +++
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT-------VIDGFCKSGKVNK 637

Query: 292 AYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           AY LL+ M  KG                   P   ++  +I+ L K  +LD A  LF E 
Sbjct: 638 AYQLLEEMKTKGH-----------------EPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   NV +Y++LIDG     R++E+Y ++ E+ + G  P  +T N +   L + +++
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL   + M+     P     ++LI  LCK  K  +AF F  +M ++GF P++  Y+  
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL     +  A  LF      G   D   YN II GL  A R ++A  LF E   KG 
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
                T  +L++   K+  I+QA +  + + E         ++T
Sbjct: 861 SIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 229/535 (42%), Gaps = 24/535 (4%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++ LL+  ++  + +   +++E M       +  T   ++  F+K  ++ +A      
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K  F    + Y  +IG L  ++  +  L L+ +M+  G   +  + + LI   + EG 
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 256 LTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVE 311
           +   +  + ++   N++    +L N  +      G +D A+     M   G  + DV   
Sbjct: 251 VDAAL-SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDV--- 306

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                         ++  +I  L K  +L+ A+ LF  M Q   +   + YN +I G   
Sbjct: 307 --------------TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + + E++Y LL      G  P+  + N +  CL R+  V  AL    +M+ +   P +  
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLST 411

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++I  LCK GK   A      M   G  P+++  +  +  L   +R+D A  +F  + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
              C PD V Y  +I GL +  RV EA  L+ +M+    IP+   Y  LI  + K G  +
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                 + ML +   SPD++   T +D +  AG  +    L+ E++  G  P+  ++  L
Sbjct: 532 DGHKIYNEML-RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GL K      A   F  MKE+G   D   +  +I  F        A+++L+EM
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 271/567 (47%), Gaps = 21/567 (3%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           T T LL     + + +K+  VF  +      D ++FS  + AF K G+V+ A +L   M+
Sbjct: 281 TCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 340

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  N  T+  LIHG  K   +D+A +  +KM K G  +    Y V+I GL K ++  
Sbjct: 341 KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 400

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A  +  E    G TP+  + + LI      G L   L ++     + +N  ++  NSI+
Sbjct: 401 EANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 460

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +     G ++QA  +L+ M+                +G  S N  +F  II+ L  + + 
Sbjct: 461 QGFCKIGQMEQAECILEEMLS---------------RG-FSINPGAFTTIIHWLCMNSRF 504

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + AL   REM       N  L   L+ GLC   +  ++ EL   + E GF     T N++
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 564

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC+  ++  A+ L++KM  +G     + +NT LI   CK GK  E F+   +MV++G
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNT-LISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   Y+  I G+  I ++D A+ L+ +  +    P+V  Y ++I G CKA ++ E E
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF E++T+ L  +   YN LI  +C++GN  +A      M  K    P   TY++LI G
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK-GIPPTTATYSSLIHG 742

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +C  GR +DA  L +EM ++G  PN + + ALI G CK  +    +   + M    + P+
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I  +    +   A ++L EM
Sbjct: 803 KITYTVMIDGYSKSGDMKTAAKLLHEM 829



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 270/536 (50%), Gaps = 27/536 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE-MQDYGWGYDKY 102
           G VE+A  LF  +++ G+  PN  +YN L+  LCK  ++D    R KE M   G      
Sbjct: 327 GKVEDAIQLFFDMEKLGVS-PNVVTYNNLIHGLCKHGNLDEA-FRFKEKMVKDGVNATLI 384

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T + L+       +F++A SV  E ++ G+  +E V++ L+  + K G +  A  +   M
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               I  N  T   +I GF K  ++++A  + ++M   GF+ +   +  II  LC N + 
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 504

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
           E AL+   EM    + P+  +L+ L+     EG+ +  V E+W    ++      +  N+
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV-ELWFRLLEKGFGANLVTTNA 563

Query: 279 IMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLM------------------IFKGT 319
           ++  L   G++ +A  LL+ M+ +G  +  +    L+                  + K  
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + P+T +++++I+ + + GKLD A++L+ E      + NV+ Y  +IDG C ++++EE  
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L  E+     +      N++ R  CR  + V A  L   MR +G  P     + LI  +
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+  +A   + +M +EG LP++VCY+A IGG   + ++D  + + +++ ++   P+ 
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           + Y ++I G  K+  +  A  L +EM+ KG++P   TYN+L NG+CK G I++  L
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 251/572 (43%), Gaps = 85/572 (14%)

Query: 162 DDCNIRLNEKTFCVL-----IHGFVKKSR------VDKALQL------------------ 192
           D C  R   +++CVL     + GFV  +R      +D+ L +                  
Sbjct: 171 DSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMAD 230

Query: 193 FDKMTKSG------------------------------FASDAAMYDVI------IGGLC 216
            +++ +SG                              F ++  ++  +      +  L 
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLV 290

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTL 274
           K  +LE +  ++  M+  G++PD  + S  I +    G++   ++  +  E   V+   +
Sbjct: 291 KANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 349

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++  L  +G++D+A+   + M+K       GV   +I          ++ ++IN L
Sbjct: 350 TYNNLIHGLCKHGNLDEAFRFKEKMVKD------GVNATLI----------TYSVLINGL 393

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           +K  K + A S+ +E  + G   N  +YN LIDG C    L ++  +  +M   G  P  
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            TLNS+ +  C+   +  A  ++ +M  +G        T +I  LC + +   A RFL +
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+     P+    +  +GGL    +   A+EL+  +   G   ++V  N +I GLCK   
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA  L  +M+ +G +    TYN LI+G CK G +++       M+ K+   PD  TY 
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV-KQGIEPDTFTYN 632

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI G+C  G+ D+A+ LWNE + +   PN  T+  +I G CK D+       F  +  +
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++ +  V+  LI A+    N   AF++  +M
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  + ++G +E+A  L D++++EGL +PN   Y  L+   CK   +D V   L+EM  Y
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGL-LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               +K T T ++  Y  SG    A  + +E++  G V + V +++L   F K G++++ 
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857

Query: 155 CELIE 159
             L E
Sbjct: 858 KLLAE 862


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/609 (27%), Positives = 292/609 (47%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  +D+     KEM + G+  DK+T+    Q  C  G++  AL +
Sbjct: 205 PSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM 264

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                +   +D  + + ++    +    D+A   + RM   +   N  T+  L+ GF+KK
Sbjct: 265 IER--EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKK 322

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++    ++   M   G   + ++++ ++   C  +    A +L + M G G  P + + 
Sbjct: 323 KQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVY 382

Query: 244 SKLITS-CSDE----GELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYNL 295
           +  I S CS E     +L  L ++++E+   ++  L      +  R L   G  D+A+ +
Sbjct: 383 NIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQI 442

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++               LM+ KG V P+TS++  +I  L +  K++ A  LF+EM  +G 
Sbjct: 443 IK---------------LMMRKGFV-PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 486

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +V+ Y  LID  C    +E++     EME  G  P+  T  ++     + + V  A +
Sbjct: 487 IPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASD 546

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV----------------QEG 459
           +  +M   G  P     + L+  LCK G++ +A      M+                 + 
Sbjct: 547 IFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y A I GL    +V  A EL   + ++GC P+ + Y+ +I G CK  ++  A+
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F  M   G +P+V TY  LI+   K   +D A+  LS+MLE  S +P+V+TYT +IDG
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE-SSCTPNVVTYTAMIDG 725

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G    A+ L + ME++GC PN +T+ +LI GL K  +   +L  F  M  +G  P+
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 786 YVTYRVLIN 794



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 286/677 (42%), Gaps = 107/677 (15%)

Query: 44  GLVEEANMLFDQV------KREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           GL+E +  LFD+        R   C+PN  +Y  LL    K   +   +  +  M + G 
Sbjct: 283 GLMEAS--LFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGC 340

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACEL 157
             +      L+  YCN+  +  A  + N +   G    +V   + +     GE   + +L
Sbjct: 341 NPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDL 400

Query: 158 I-------ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +       E M   +  LN+              + DKA Q+   M + GF  D + Y  
Sbjct: 401 LALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSK 460

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDR- 267
           +I  LC+  ++E A  L+ EMK  G+ PD    + LI S    G    L+++   W D  
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVG----LIEQARSWFDEM 516

Query: 268 -------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-------------------- 300
                   V T T L ++ ++       + QA ++   M+                    
Sbjct: 517 ESVGCSPSVVTYTALLHAYLK----TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572

Query: 301 KGEPIADVGVEMLMI-----------FKG----TVSPNTSSFDIIINTLLKDGKLDLALS 345
            GE      V   MI           F+G    +++PN  ++  +I+ L K  K+  A  
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M+  GC  N  +Y+ LIDG C   +L+ + E+   M + G+ PT  T  S+   + 
Sbjct: 633 LLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMF 692

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + + +  A+ ++ +M      P V   T +I  LC+ G+  +A + L+ M + G  P++V
Sbjct: 693 KDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y++ I GL    +VD++L+LF  +   GC P+ V Y ++I+  C A  + EA  L +EM
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812

Query: 526 I---------------------------------TKGLIPSVATYNLLINGWCKSGNIDQ 552
                                             + G++     Y LLI+ + K+G +++
Sbjct: 813 KQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEK 872

Query: 553 AMLCLSRMLEKESG----SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           A+     M+E  S     S D  TYT+LI  LC+A + + A  L++E+  KG  P    F
Sbjct: 873 ALELHKEMMEVSSSLNITSKD--TYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAF 930

Query: 609 MALITGLCKCDRPRAAL 625
           + LI GL K ++   AL
Sbjct: 931 ICLIKGLIKVNKWNEAL 947



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 234/545 (42%), Gaps = 46/545 (8%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + G   KA E + R+ D   R +  T+  L+       ++D   ++  +M++ GF +D  
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
                   LCK  +   AL +           DF++ + L T         L+   ++++
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIER-------EDFKLDTVLCTQMIS----GLMEASLFDE 292

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  + CNS +  +V+  +      LL   +K + +      + M+     +PN S 
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRT------LLAGFLKKKQLGWCKRIISMMMNEGCNPNPSL 346

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL---------EE 377
           F+ ++++         A  L   M   GC     +YN  I  +C+   L         E+
Sbjct: 347 FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEK 406

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            YE   EM  S          +  RCLC       A  +++ M  +G  P     + +I 
Sbjct: 407 VYE---EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVIT 463

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC+  K  +AF    +M   G +PD+  Y+  I     +  ++ A   F ++ + GC P
Sbjct: 464 FLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSP 523

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VV Y  ++    K ++V +A D+F+ M+  G  P+  TY+ L++G CK+G   +A    
Sbjct: 524 SVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVY 583

Query: 558 SRML---------------EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           ++M+                 +S +P+V+TY  LIDGLC A +  DA  L + M   GC 
Sbjct: 584 AKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCE 643

Query: 603 PNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           PN I + ALI G CK  +   A  V FRM K  G  P +  + +LI A   +    LA +
Sbjct: 644 PNHIIYDALIDGFCKVGKLDNAQEVFFRMSK-CGYLPTVHTYTSLIDAMFKDRRLDLAIK 702

Query: 662 VLKEM 666
           VL +M
Sbjct: 703 VLSQM 707



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/562 (24%), Positives = 255/562 (45%), Gaps = 40/562 (7%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           ++++ S C ++        RCL  +G  ++A  +   + R+G  VP+  +Y+ ++  LC+
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGF-VPDTSTYSKVITFLCE 467

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
           +  V+   +  +EM+  G   D YT T L+  +C  G  ++A S F+E+   G     V 
Sbjct: 468 AMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVT 527

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ LL A+ K  +V +A ++  RM D     N  T+  L+ G  K     KA +++ KM 
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587

Query: 198 KS----------------GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            +                  A +   Y  +I GLCK  ++  A +L   M  +G  P+  
Sbjct: 588 GTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI 647

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           I   LI      G+L          ++V      C  +        ++    +L+ AM K
Sbjct: 648 IYDALIDGFCKVGKLD-------NAQEVFFRMSKCGYL-------PTVHTYTSLIDAMFK 693

Query: 302 GEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
              + D+ +++L  + + + +PN  ++  +I+ L + G+   AL L   M + GC  NV 
Sbjct: 694 DRRL-DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y +LIDGL  S +++ S +L  +M   G  P + T   +    C    +  A +L+ +M
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +      +V+    +++   K  K + +   L ++   G +     Y   I       R+
Sbjct: 813 KQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL 870

Query: 481 DLALELFRDICAHGCCPDVVA---YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           + ALEL +++       ++ +   Y  +I  LC A ++ +A +L++E+  KG++P ++ +
Sbjct: 871 EKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAF 930

Query: 538 NLLINGWCKSGNIDQAM-LCLS 558
             LI G  K    ++A+ LC S
Sbjct: 931 ICLIKGLIKVNKWNEALQLCYS 952



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 207/481 (43%), Gaps = 41/481 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VGL+E+A   FD+++  G C P+  +Y  LL A  K+  V         M D 
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVG-CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--------DHGWVDEHVFSI------- 140
           G   +  T + L+   C +G+  KA  V+ ++I        D  +  EH  SI       
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 141 --LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
             L+    K  +V  A EL++ M       N   +  LI GF K  ++D A ++F +M+K
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G+      Y  +I  + K+++L++A+++ S+M  S  TP+    + +I      GE   
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734

Query: 259 LVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            +K   + E R  N   +   S++  L  +G +D +  L   MI                
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI---------------- 778

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
               +PN  ++ ++IN     G LD A SL  EM Q    + V  Y +++ G   S +  
Sbjct: 779 TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFI 836

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN---T 433
            S  LL E+E  G          +     +   +  AL L ++M        +      T
Sbjct: 837 ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYT 896

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI+ LC   +  +AF   +++ ++G +P++  +   I GLI + + + AL+L   +C  
Sbjct: 897 SLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDE 956

Query: 494 G 494
           G
Sbjct: 957 G 957



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 165/415 (39%), Gaps = 78/415 (18%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            ++I+    + G    AL     +   G   +   YN L+  L  + +++  + + +EM 
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 387 ESGFKPTHFTLNSMFRCLCR------------RQD-----------VVG---------AL 414
           E GF    FT+    + LC+            R+D           + G         A+
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAI 294

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           + + +MR     P V     L+    K  +     R ++ M+ EG  P+   +++ +   
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR------VAEAEDLFNEMIT- 527
            + +    A +L   +   GC P  V YNI I  +C  +       +A AE ++ EM+  
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLAS 414

Query: 528 ----------------------------------KGLIPSVATYNLLINGWCKSGNIDQA 553
                                             KG +P  +TY+ +I   C++  +++A
Sbjct: 415 SCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKA 474

Query: 554 MLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            L    M  K  G  PDV TYT LID  C  G  + A   ++EME  GC+P+ +T+ AL+
Sbjct: 475 FLLFQEM--KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALL 532

Query: 613 TGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               K  + P+A+ +  RM+ + G  P+   + AL+           A EV  +M
Sbjct: 533 HAYLKTKQVPQASDIFHRMV-DAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 148/371 (39%), Gaps = 72/371 (19%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           Q+G       YN L + L   +R   +  LLRE+ E   +     LN + R  CR     
Sbjct: 130 QVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWA 189

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD---IVCYS 468
            AL  + +++  G+ P       L++ L   G+    FR   +M + GF  D   + C++
Sbjct: 190 KALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFA 249

Query: 469 AA-----------------------------IGGLIDIKRVDLALELFRDICAHGCCPDV 499
            A                             I GL++    D A+     +  + C P+V
Sbjct: 250 QALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNV 309

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y  +++G  K +++   + + + M+ +G  P+ + +N L++ +C + +   A   L+R
Sbjct: 310 VTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNR 369

Query: 560 ML--------------------EKESGSPDVIT-----YTTLIDGLCI------------ 582
           M                      +E  SPD++      Y  ++   C+            
Sbjct: 370 MAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARC 429

Query: 583 ---AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
               G+ D A  +   M  KG  P+  T+  +IT LC+  +   A + F+ MK  G+ PD
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489

Query: 640 MFVFVALISAF 650
           ++ +  LI +F
Sbjct: 490 VYTYTILIDSF 500


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 173/617 (28%), Positives = 295/617 (47%), Gaps = 24/617 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A     ++ + +++  S   +   +L   I    S GL  E     D ++ E   V 
Sbjct: 99  LGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVA 158

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N + YN LL  L     + LVE+    M   G   D  T   L++  C + Q   A+ + 
Sbjct: 159 NTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLM 218

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+ D G + DE  F+ ++  F + G +D A  + E+M +    +   T  VL++GF K+
Sbjct: 219 EEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKE 278

Query: 184 SRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            R+++AL+  ++M+ + GF  D   +++++ GL K   ++ AL++   M   G  PD   
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + LI+     GE+   VK + +  +RD +  T+  N+I+  L     +++A  L     
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL----- 393

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                      +++  KG + P+  +++ +I  L       +A+ L++EM   GC  + F
Sbjct: 394 ----------ALVLTGKG-ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF 442

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LID LC   +L+E+  LL+EME SG      T N++    C+ + +  A  +  +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 421 RVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            +QG     V +NT LI  LCK  +  EA + +  M+ EG  PD   Y++ +        
Sbjct: 503 ELQGVSRNSVTYNT-LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A ++ + + + GC PD+V Y  +I+GLCKA RV  A  L   +  KG+  +   YN 
Sbjct: 562 IKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNP 621

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEE 598
           +I    +     +A+     M+EK + +PD +TY  +  GLC  G P  +A+    EM E
Sbjct: 622 VIQALFRRKRSKEAVRLFREMIEK-AEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLE 680

Query: 599 KGCAPNRITFMALITGL 615
           +G  P   +F  L  GL
Sbjct: 681 RGYVPEFSSFYMLAEGL 697



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 265/567 (46%), Gaps = 26/567 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD-DC 164
           +L     +G+FD    +  E+ I    +D     + + +++ +G  ++  + ++ M+ + 
Sbjct: 95  VLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEF 154

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  N   +  L++  V  +++         M   G   D + ++++I  LC+  Q+  A
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           + L  EM+  G+ PD +  + ++    +EG L   + VKE   +       +  N ++  
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G I++A   ++ M   E                  P+  +F++++N L K G +  
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFF---------------PDKYTFNMLVNGLSKTGHVKH 319

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +   M + G   +++ YN+LI GLC    ++E+ ++L +M E    P   T N++  
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC---KHGKAMEAFRFLTDMVQEG 459
            LC+   V  A  L   +  +G  P V     LI+ LC    H  AME ++   +M  +G
Sbjct: 380 TLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYK---EMKTKG 436

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   Y+  I  L    ++  AL L +++   GC  +V+ YN +I G CK +R+AEAE
Sbjct: 437 CHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAE 496

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F++M  +G+  +  TYN LI+G CKS  +++A   + +M+  E   PD  TY +L+  
Sbjct: 497 EIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI-MEGLRPDKFTYNSLLTY 555

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C AG    A  +   M   GC P+ +T+  LI GLCK  R  AA    R ++ KG+   
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLT 615

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I A         A  + +EM
Sbjct: 616 PHAYNPVIQALFRRKRSKEAVRLFREM 642



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 237/516 (45%), Gaps = 52/516 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +F  +L    K GE D   ++++ M      ++  +  V I  +      ++ LQ  D M
Sbjct: 91  IFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAM 150

Query: 197 -TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
             + G  ++   Y+ ++  L    +L++    +S M   GI PD                
Sbjct: 151 EVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPD---------------- 194

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                        V+T  +L  ++ R          A+ +  A++  E + D G+     
Sbjct: 195 -------------VSTFNILIKALCR----------AHQIRPAILLMEEMEDFGL----- 226

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  +F  I+   +++G LD A+ +  +M + GC+      N L++G C   R+
Sbjct: 227 -----LPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRI 281

Query: 376 EESYELLREME-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           EE+   + EM    GF P  +T N +   L +   V  AL ++  M  +G +P +     
Sbjct: 282 EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNS 341

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK G+  EA + L  M++    P+ V Y+  I  L    +V+ A +L   +   G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDV  YN +I GLC ++    A +L+ EM TKG  P   TYN+LI+  C  G + +A+
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  M E    + +VITY TLIDG C   R  +A  ++++ME +G + N +T+  LI G
Sbjct: 462 NLLKEM-EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LCK +R   A      M  +G++PD F + +L++ F
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYF 556



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 173/356 (48%), Gaps = 21/356 (5%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQN----VFLYNNLIDGLCNSNRLE 376
           P++S F  +++ L K G+ D    + +EM   +  + N    VF+ +    GL N     
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYN----- 141

Query: 377 ESYELLR-----EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              E+L+     E+E      THF  N +   L     +         M  +G  P V  
Sbjct: 142 ---EILQFVDAMEVEFGVVANTHF-YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +LIK LC+  +   A   + +M   G LPD   ++  + G I+   +D A+ +   + 
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-ITKGLIPSVATYNLLINGWCKSGNI 550
             GC    V  N++++G CK  R+ EA     EM + +G  P   T+N+L+NG  K+G++
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+  +  ML +E   PD+ TY +LI GLC  G  D+A+ + N+M E+ C+PN +T+  
Sbjct: 318 KHALEVMDMML-REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNT 376

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +I+ LCK ++   A     ++  KG+ PD+  + +LI       N  +A E+ KEM
Sbjct: 377 IISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/662 (26%), Positives = 296/662 (44%), Gaps = 66/662 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++YN L++ LCK+   D     L EM D G   D  T   ++   C +G+F++A S+
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 124 FNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              + +         ++ L+    K   VD+A  L++         +  T+ +L  G  K
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + R+D+A +L  +M+ +G   +   Y+ +I GLCK  + E A +L   +  SG  PD   
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + ++     EG L   +K  E    R      +   ++M  L   G +D+A+++ + M+
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 301 KGEPIADVGVEMLMI------------------FKGTVSPNTSSFDIIINTLLKDGKLDL 342
             +  AD    + ++                   +GT  P    ++ +++   K+G+LD 
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYIDVYNALMDGYCKEGRLDE 305

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
             ++F +M   GC+ N+  YN ++DGLC   +++E++  L  M  +G  P   + N +  
Sbjct: 306 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 365

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
            L +      A  ++ +M   G  P  V +NTL+  + CK  +  +A   L +M++ G  
Sbjct: 366 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM-AQFCKEERFDDAVGILKNMIKAGVD 424

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV-VAYNIIISGLCKAQRVAEAED 520
           PD V Y+  I GL    R+  A EL  ++  +GC       YN II  LCK   + +A  
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALL 484

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L + M   G+  +  TYN+ I+  CK G +D+A   LS M        D ++YTT+I GL
Sbjct: 485 LMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM----DTLRDEVSYTTVIIGL 540

Query: 581 CIA------------------------------------GRPDDAIMLWNEMEEKGCAPN 604
           C A                                     R D+A+ L   M ++GC+P+
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            IT+  +IT LCK D+   A   F  M  +G+      +  LI     +     A +VL+
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660

Query: 665 EM 666
           EM
Sbjct: 661 EM 662



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 231/475 (48%), Gaps = 26/475 (5%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +   A D   Y+++I GLCK  + + A ++  EM   G+TPD    + ++      G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 256 L----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                +LL   +  +R+        N+++  L    ++D+A  L+   +    +      
Sbjct: 61  FERAHSLLA--VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV------ 112

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                     P+  ++ I+ + L K G++D A  L +EM+  GC  N+  YN LIDGLC 
Sbjct: 113 ----------PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +++ E++YELL  +  SGF P   T   +   LC+   +  AL +V  M  +G  P V  
Sbjct: 163 ASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 222

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T L++ LC+ G+  EA     +MV +    D + Y + + G     R   A ++   I 
Sbjct: 223 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 282

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
                P +  YN ++ G CK  R+ E  ++F +M  +G +P++ TYN++++G CK G +D
Sbjct: 283 GT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   L  M       PDV++Y  +IDGL  A +P +A  + ++M + G  P+ +T+  L
Sbjct: 340 EAFPFLESM-HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   CK +R   A+   + M + G+ PD   +  LIS          A+E++ EM
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 283/614 (46%), Gaps = 34/614 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  L D+    G  VP+  +Y+ L + LCK   +D     +KEM   G   +  T  
Sbjct: 96  VDRAKTLVDEFVSSGF-VPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYN 154

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C + + +KA  +   ++  G+V + V ++I++    K G +DKA +++E M   
Sbjct: 155 TLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 214

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  T+  L+ G  +  RVD+A  +F +M      +DA  Y  ++ G CK+ + + A
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMR 281
            ++   ++G   TP  ++ + L+     EG L   +  ++ED   R         N +M 
Sbjct: 275 QKVVDGIRG---TPYIDVYNALMDGYCKEGRLDE-IPNVFEDMACRGCVPNIKTYNIVMD 330

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---FKGT----------------VSP 322
            L  +G +D+A+  L++M     + DV    ++I   FK +                + P
Sbjct: 331 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 390

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++ ++    K+ + D A+ + + M + G   +   YN LI GL  +NRL ++YEL+
Sbjct: 391 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 450

Query: 383 REMEESG-FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            EM  +G       T N++   LC+   +  AL L+  M   G E       + I  LCK
Sbjct: 451 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVV 500
            G+  EA   L++M     L D V Y+  I GL   +++D A +L R++ A  G C    
Sbjct: 511 EGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +N++I    K +R+ EA  L   M+ +G  PSV TYN++I   CK   +D+A      M
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             +   +  V +YT LI GLC  GR  +A+ +  EM    C  + +    L   L    R
Sbjct: 628 AVRGIVASSV-SYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGR 686

Query: 621 PRAALVHFRMMKEK 634
              A    R M  K
Sbjct: 687 GEEAAELLRRMTTK 700


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 270/592 (45%), Gaps = 37/592 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++  G  GL  +A  L   +K    C P+  SYN +L+ L       +      +M   
Sbjct: 145 IMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK 204

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   + YT   +++  C   + D A  +  ++  HG V +  ++  L+ A SK   VD+A
Sbjct: 205 GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEA 264

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E M       +  TF  +I+GF + +RV +  +L D+M   GF  +   Y  ++ G
Sbjct: 265 LKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHG 324

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-------R 267
           LCK  +++ A  L S++ G    P+    + L+      G L      +++         
Sbjct: 325 LCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSS 326
           DV T + L N     L   G    A  L+  M  KG                   PN ++
Sbjct: 381 DVFTFSTLVNG----LCKKGLFGSALELVNDMDAKG-----------------CKPNLNT 419

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + I+I+   K G+L+ A  + REM   G   N   YN LI  LC   ++ E+ ++  EM 
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKA 445
             G KP  FT NS+   LCR  ++  AL L R M ++G     V  NTL I    + G+ 
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL-IHAFLRRGEI 538

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA + + DM+  G   D + Y+  I  L     V+  L LF ++   G  P ++  NI+
Sbjct: 539 QEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNIL 598

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G C A +V  A +   +MI +G  P + TYN LING CK G I +A L L   L+ E 
Sbjct: 599 INGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEA-LNLFEKLQAEG 657

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             PD ITY TLI  LC  G  DDA  L     E G  PN +T+  L+    K
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 249/531 (46%), Gaps = 58/531 (10%)

Query: 120 ALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A +VF +++  G   +++ F +++ A     EVD AC L+  M       N   +  LI 
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMALQLYSEMKGSGIT 237
              K+ RVD+AL+L ++M   G   D   ++ +I G C+ N+ LE A +L   M   G T
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA-KLVDRMILKGFT 312

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P                               N MT     +M  L     ID+A    Q
Sbjct: 313 P-------------------------------NDMTY--GYLMHGLCKTCRIDEA----Q 335

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS-LFREMTQIGCM 356
           A++   P                 PN   F+ ++N  +++G+L+ A + ++ +M   G +
Sbjct: 336 ALLSKVP----------------GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +VF ++ L++GLC       + EL+ +M+  G KP   T   +    C++  +  A  +
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +R+M  +G          LI  LCKHGK  EA     +M  +G  PDI  +++ I GL  
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +  ++ AL L+RD+   G   + V +N +I    +   + EA  L N+M+ +G      T
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI   CK+G +++ +     M+ K   +P +IT   LI+G C AG+  +A+    +M
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRK-GLTPSIITCNILINGFCTAGKVHNALEFMRDM 618

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             +G +P+ +T+ +LI GLCK  R + AL  F  ++ +G++PD   +  LI
Sbjct: 619 IHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 247/523 (47%), Gaps = 27/523 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L  V  V+ A +L   + + G CVPN+  Y  L++AL K   VD     L+E
Sbjct: 212 TFGLVMKALCMVNEVDNACLLLRDMTKHG-CVPNSMIYQTLIDALSKRDRVDEALKLLEE 270

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T   ++  +C   +  +   + + +I  G+  ++  +  L+    K   
Sbjct: 271 MFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCR 330

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
           +D+A  L+ ++   N+      F  L++GFV+  R+++A   ++DKM  +G+  D   + 
Sbjct: 331 IDEAQALLSKVPGPNV----VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFS 386

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED 266
            ++ GLCK      AL+L ++M   G  P+    + LI     +G+L    L+++E+   
Sbjct: 387 TLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLT- 445

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           +  +  T+  N+++  L  +G I +A ++   M                 KG   P+  +
Sbjct: 446 KGFSLNTVGYNALISALCKHGKIHEALDMFGEMSS---------------KG-CKPDIFT 489

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I  L +  +++ AL+L+R+M   G + N   +N LI        ++E+ +L+ +M 
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G      T N + + LC+   V   L L  +M  +G  P +    +LI   C  GK  
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVH 609

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A  F+ DM+  GF PDIV Y++ I GL    R+  AL LF  + A G  PD + YN +I
Sbjct: 610 NALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
             LC+     +A  L    +  G +P+  T+N+L+  + K  N
Sbjct: 670 CWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 229/483 (47%), Gaps = 57/483 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N+ TF +++      + VD A  L   MTK G   ++ +Y  +I  L K  +++ AL+L 
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM   G  PD                             VNT   +     R       
Sbjct: 269 EEMFLMGCPPD-----------------------------VNTFNTVIYGFCR------- 292

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                  L  +++G  + D      MI KG  +PN  ++  +++ L K  ++D A +L  
Sbjct: 293 -------LNRVLEGAKLVD-----RMILKG-FTPNDMTYGYLMHGLCKTCRIDEAQALLS 339

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE-MEESGFKPTHFTLNSMFRCLCRR 407
           ++       NV  +N L++G   + RL E+   + + M  +G+ P  FT +++   LC++
Sbjct: 340 KVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                AL LV  M  +G +P +   T+LI   CK G+  EA   L +M+ +GF  + V Y
Sbjct: 396 GLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGY 455

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I  L    ++  AL++F ++ + GC PD+  +N +I GLC+   + +A  L+ +M+ 
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRP 586
           +G+I +  T+N LI+ + + G I +A+  ++ ML +  G P D ITY  LI  LC  G  
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR--GCPLDEITYNGLIKALCKTGAV 573

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           +  + L+ EM  KG  P+ IT   LI G C   +   AL   R M  +G  PD+  + +L
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSL 633

Query: 647 ISA 649
           I+ 
Sbjct: 634 ING 636



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 198/379 (52%), Gaps = 9/379 (2%)

Query: 291 QAYNL-LQAMIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           ++YN+ L  ++ G  P     V   M+ KG VSPN  +F +++  L    ++D A  L R
Sbjct: 176 RSYNVVLDVLVVGNCPSVASNVFYDMLSKG-VSPNDYTFGLVMKALCMVNEVDNACLLLR 234

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +MT+ GC+ N  +Y  LID L   +R++E+ +LL EM   G  P   T N++    CR  
Sbjct: 235 DMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLN 294

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V+    LV +M ++G  P       L+  LCK  +  EA   L+ +      P++V ++
Sbjct: 295 RVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFN 350

Query: 469 AAIGGLIDIKRVDLALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             + G +   R++ A     D +  +G  PDV  ++ +++GLCK      A +L N+M  
Sbjct: 351 TLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDA 410

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG  P++ TY +LI+G+CK G +++A L L  ML K   S + + Y  LI  LC  G+  
Sbjct: 411 KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK-GFSLNTVGYNALISALCKHGKIH 469

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A+ ++ EM  KGC P+  TF +LI GLC+ D    AL  +R M  +G+  +   F  LI
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529

Query: 648 SAFLSELNPPLAFEVLKEM 666
            AFL       A +++ +M
Sbjct: 530 HAFLRRGEIQEALKLVNDM 548



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 177/342 (51%), Gaps = 8/342 (2%)

Query: 309 GVEMLMIFKGTV--SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
              +L+  KG     P+  S++++++ L+      +A ++F +M   G   N + +  ++
Sbjct: 158 ATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVM 217

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             LC  N ++ +  LLR+M + G  P      ++   L +R  V  AL L+ +M + G  
Sbjct: 218 KALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCP 277

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V     +I   C+  + +E  + +  M+ +GF P+ + Y   + GL    R+D A  L
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL 337

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED-LFNEMITKGLIPSVATYNLLINGWC 545
              +      P+VV +N +++G  +  R+ EA   ++++MI  G +P V T++ L+NG C
Sbjct: 338 LSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLC 393

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G    A+  ++ M + +   P++ TYT LIDG C  G+ ++A ++  EM  KG + N 
Sbjct: 394 KKGLFGSALELVNDM-DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           + + ALI+ LCK  +   AL  F  M  KG KPD+F F +LI
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLI 494



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 5/343 (1%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL-YNNLIDGLCNSNRLEESYELLR 383
           S F +I+    + G    A  L  +M  + C +  F  YN ++D L   N    +  +  
Sbjct: 140 SLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFY 199

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M   G  P  +T   + + LC   +V  A  L+R M   G  P       LI  L K  
Sbjct: 200 DMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRD 259

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  EA + L +M   G  PD+  ++  I G   + RV    +L   +   G  P+ + Y 
Sbjct: 260 RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYG 319

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ GLCK  R+ EA+ L +++      P+V  +N L+NG+ ++G +++A   +   +  
Sbjct: 320 YLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PDV T++TL++GLC  G    A+ L N+M+ KGC PN  T+  LI G CK  +   
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A +  R M  KG   +   + ALISA         A ++  EM
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM 478



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 2/169 (1%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D++   C +       LI+ L   G VE+   LF+++ R+GL  P+  + N L+   
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL-TPSIITCNILINGF 602

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDE 135
           C +  V      +++M   G+  D  T   L+   C  G+  +AL++F ++   G   D 
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             ++ L+    + G  D AC L+ R  +     N+ T+ +L++ F K+S
Sbjct: 663 ITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQS 711



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 1/188 (0%)

Query: 480 VDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           V+ ++E+F+   A  G C     Y ++I  L  A      + L  +M  +G++   + + 
Sbjct: 84  VETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFI 143

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           L++  + ++G   QA   L  M       P   +Y  ++D L +   P  A  ++ +M  
Sbjct: 144 LIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLS 203

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +PN  TF  ++  LC  +    A +  R M + G  P+  ++  LI A         
Sbjct: 204 KGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDE 263

Query: 659 AFEVLKEM 666
           A ++L+EM
Sbjct: 264 ALKLLEEM 271


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 229/491 (46%), Gaps = 52/491 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+   V+  +  +A  LF     +    D   Y+++I G C    L  AL+L  EMK +G
Sbjct: 83  LLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAG 142

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD    + +IT+ ++ G+L                                 D A + 
Sbjct: 143 FAPDAFTHTPIITAMANAGDL---------------------------------DGAMDH 169

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M                      PN  ++  +I    +  KL+ A+ L  EM + GC
Sbjct: 170 LRSM-------------------GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGC 210

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+  YN L+D LC  + +  + +++++M E GF P   T NS+    C+R +V  A  
Sbjct: 211 PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+  M  +G  P V   + LI  LCK  K +EA   L +M   G  PD   YSA I GL 
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLC 330

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              +++ A ++ R +   GC PDVV Y+ II   CK+ ++ EA+    EM  +   P V 
Sbjct: 331 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 390

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+G CK G I +A + L +M E     PDV+TY+T+I+GLC +    +A  L + 
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M + GC P+ +T+  +I GLCKC R   A    + MK  G  P++  +  LIS       
Sbjct: 451 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 510

Query: 656 PPLAFEVLKEM 666
              A  V++EM
Sbjct: 511 VDEAERVMEEM 521



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 243/544 (44%), Gaps = 63/544 (11%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
           G+ +  ++   LLQV     +  +A  +F +E++     D   ++I++  F   G++  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+E M       +  T   +I        +D A+   D +   G   +   Y  +I  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR-DVN 270
             + K+LE A++L  EM+  G  P+   + +L   +   S  G    +VK++ E     N
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
            MT   NS++      G++D A  LL                +M+ KG + PN  ++  +
Sbjct: 249 VMTF--NSLVDGFCKRGNVDDARKLLG---------------IMVAKG-MRPNVVTYSAL 290

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L K  K   A  +  EM   G   + F Y+ LI GLC ++++EE+ ++LR M  SG 
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     +S+    C+   ++ A   +++MR Q   P V     +I  LCK GK  EA  
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 410

Query: 451 FLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII--- 506
            L  M + G  LPD+V YS  I GL     +  A +L   +C  GC PDVV Y  II   
Sbjct: 411 ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470

Query: 507 --------------------------------SGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                                           SGLCKA++V EAE +  EM   G  P++
Sbjct: 471 CKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 530

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLE-KESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
            TYN ++NG C SG I +A   + RM + +   SPD  TY T+++ L  +    +A  L 
Sbjct: 531 VTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 590

Query: 594 NEME 597
            +M+
Sbjct: 591 EQMK 594



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 244/519 (47%), Gaps = 34/519 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+  SYN ++   C +  +      L+EM+  G+  D +T TP++    N+G  D A+
Sbjct: 108 CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM 167

Query: 122 SVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                +      D +V  ++ L+ AF++  ++++A +L+E M +     N  T+ VL+  
Sbjct: 168 DHLRSM----GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K S V  A  +  KM + GFA +   ++ ++ G CK   ++ A +L   M   G+ P+
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283

Query: 240 FEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               S LI       +  L  KE+ E+   R V       ++++  L     I++A  +L
Sbjct: 284 VVTYSALIDGLCKSQKF-LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M      A  G           +P+   +  II+   K GKL  A    +EM +    
Sbjct: 343 RRM------AGSG----------CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 386

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDVVGALN 415
            +V  YN +IDGLC   ++ E+  +L +M+ESG   P   T +++   LC+   +V A  
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ +M   G  P V   T +I  LCK G+  EA   L  M + G  P++V Y+  I GL 
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI--TKGLIPS 533
             ++VD A  +  ++   GC P++V YN +++GLC + R+ EA+ L   M        P 
Sbjct: 507 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPD 566

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRM-----LEKESGS 567
            ATY  ++N    S  + +A   L +M      ++E GS
Sbjct: 567 AATYRTIVNALMSSDLVQEAEQLLEQMKSTTSSQQEQGS 605



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++N+L KD KL LA   +   +  G     F +N+L+  L    +  E+ +L R    + 
Sbjct: 49  VVNSL-KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLAS 107

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P   + N +    C   D+  AL L+ +M+  G  P    +T +I  +   G    A 
Sbjct: 108 CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM 167

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             L  M   G  P++V Y+A I      K+++ A++L  ++   GC P++V YN+++  L
Sbjct: 168 DHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK   V  A+D+  +MI  G  P+V T+N L++G+CK GN+D A   L  M+ K    P+
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK-GMRPN 283

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+TY+ LIDGLC + +  +A  +  EM+ +G  P+  T+ ALI GLCK D+   A    R
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M   G  PD+ V+ ++I AF        A + L+EM
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 210/497 (42%), Gaps = 95/497 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI        +EEA  L ++++  G C PN  +YN L++ALCK   V   +  +K+M + 
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERG-CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 243

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G+  +  T                    FN ++D               F K G VD A 
Sbjct: 244 GFAPNVMT--------------------FNSLVD--------------GFCKRGNVDDAR 269

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +L+  M    +R N  T+  LI G  K  +  +A ++ ++M   G   DA  Y  +I GL
Sbjct: 270 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGL 329

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DV 269
           CK  ++E A Q+   M GSG TPD  + S +I +    G+L    K + E R      DV
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 389

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            T     N+++  L   G I +A  +L+ M +                G V P+  ++  
Sbjct: 390 VTY----NTVIDGLCKLGKIAEAQVILEQMQE---------------SGDVLPDVVTYST 430

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN L K   L  A  L   M + GC  +V  Y  +IDGLC   RLEE+  LL+ M+ +G
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEA 448
             P   T  ++   LC+ + V  A  ++ +MR  G  P  V +NT ++  LC  G+  EA
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT-MVNGLCVSGRIKEA 549

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            + +  M                                +D  A  C PD   Y  I++ 
Sbjct: 550 QQLVQRM--------------------------------KDGRAE-CSPDAATYRTIVNA 576

Query: 509 LCKAQRVAEAEDLFNEM 525
           L  +  V EAE L  +M
Sbjct: 577 LMSSDLVQEAEQLLEQM 593


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 301/635 (47%), Gaps = 26/635 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR     G V+ A  L D++K   L  P+   YN  ++   K+  VD+      EM+  
Sbjct: 241 LIRVFAREGRVDAALSLLDEMKSNSL-EPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKAN 299

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKA 154
           G   D  T T ++ V C + + ++A+ +F  +  +  V   + ++ +++ +   G+ + A
Sbjct: 300 GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDA 359

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ER        +  ++  ++    +K +VD+AL+ F++M K     + + Y+++I  
Sbjct: 360 YSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDM 418

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT--- 271
           LCK  +LE AL +   MK +G+ P+   ++ ++        L      I+E  D  T   
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-SIFEGLDHKTCRP 477

Query: 272 -MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                C S++  L  +G +D+AY L + M+    I                PN   +  +
Sbjct: 478 DAVTYC-SLIEGLGRHGRVDEAYKLYEQMLDANQI----------------PNAVVYTSL 520

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K G+ +    ++ EM ++GC  ++ L N  +D +  +  +E+   L +E++  GF
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   +   +   L +      A  L   M+ QG     +    +I   CK GK  +A++
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M  +G  P +V Y + I GL  I R+D A  LF +  + G   +VV Y+ +I G  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  R+ EA  +  E++ KGL P+V T+N L++   K+  I +A++C   M + +  +P+ 
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC-TPNY 759

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           ITY+ LI GLC   + + A + W EM+++G  PN  T+  +I+GL K      A   F  
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            KEKG   D  ++ A+I    +      A+ + +E
Sbjct: 820 FKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 170/637 (26%), Positives = 302/637 (47%), Gaps = 25/637 (3%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           F Q  R+    P   +Y  L+ AL  S   D +    ++MQ+ G+  + +  T L++V+ 
Sbjct: 187 FIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFA 246

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
             G+ D ALS+ +E+  +    D  ++++ +  F K G+VD A +    M    + L++ 
Sbjct: 247 REGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDV 306

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  +I    K  R+++A++LF+ M ++     A  Y+ +I G     + E A  L    
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-DRDVNTMTLLCNSIMRILVSNGSID 290
           +  G  P     + +++    +G++   +K+  E  +D        N ++ +L   G ++
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 291 QAYNLLQAMIKGEPIADVGVEMLM---------------IFKG----TVSPNTSSFDIII 331
            A  +  AM       +V    +M               IF+G    T  P+  ++  +I
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L + G++D A  L+ +M     + N  +Y +LI       R E+ +++  EM   G  
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P    LN+   C+ +  ++     L ++++  G  P  +  T+LI  L K G A EA+  
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M ++G + D   Y+  I G     +V+ A +L  ++   G  P VV Y  +I GL K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  LF E  +KG+  +V  Y+ LI+G+ K G ID+A L +  +++K   +P+V 
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVY 725

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           T+  L+D L  A    +A++ +  M++  C PN IT+  LI GLCK  +   A V ++ M
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM 785

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLA---FEVLKE 665
           +++G KP++F +  +IS      N   A   FE  KE
Sbjct: 786 QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 290/620 (46%), Gaps = 53/620 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M  +L +A R+     L + + +++      A   +I   G  G  E+A  L ++ +R+G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C+P+  SYNC+L  L +   VD    + +EM+      +  T   ++ + C +G+ + A
Sbjct: 371 -CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETA 428

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + + D G     +  +I++    K   +D AC + E +D    R +  T+C LI G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             +  RVD+A +L+++M  +    +A +Y  +I    K  + E   ++Y+EM   G +PD
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                             LL N+ M  +   G I++   L Q  
Sbjct: 549 L---------------------------------LLLNTYMDCVFKAGEIEKGRALFQ-- 573

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I ++G            P+  S+ I+I+ L+K G    A  LF  M + GC+ + 
Sbjct: 574 ----EIKNLGF----------IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +IDG C S ++ ++Y+LL EM+  G +PT  T  S+   L +   +  A  L  +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            + +G E  V   + LI    K G+  EA+  + +++Q+G  P++  ++  +  L+  + 
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  AL  F+ +    C P+ + Y+I+I GLCK ++  +A   + EM  +G  P+V TY  
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G  K+GNI +A     +  EK  G  D   Y  +I+GL  A R  DA  L+ E   K
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEK-GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858

Query: 600 GCAPNRITFMALITGLCKCD 619
           GC+    T + L+  L K +
Sbjct: 859 GCSIYTKTCVVLLDSLHKAE 878



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 264/584 (45%), Gaps = 52/584 (8%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S+L R RR   +      VV   C +S         CLG  G V+EA   F+++K++   
Sbjct: 361 SLLERQRRKGCI----PSVVSYNCILS---------CLGRKGQVDEALKKFEEMKKDA-- 405

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN +++ LCK+  ++   +    M+D G   +  T+  ++   C + + D A S
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465

Query: 123 VFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +F E +DH     D   +  L+    + G VD+A +L E+M D N   N   +  LI  F
Sbjct: 466 IF-EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R +   +++++M + G + D  + +  +  + K  ++E    L+ E+K  G  PD 
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584

Query: 241 EILSKLITSCSDEG------ELTLLVKE---IWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              + LI      G      EL   +KE   + + R  NT       ++     +G +++
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT-------VIDGFCKSGKVNK 637

Query: 292 AYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           AY LL+ M  KG                   P   ++  +I+ L K  +LD A  LF E 
Sbjct: 638 AYQLLEEMKTKGH-----------------EPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   NV +Y++LIDG     R++E+Y ++ E+ + G  P  +T N +   L + +++
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 740

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL   + M+     P     ++LI  LCK  K  +AF F  +M ++GF P++  Y+  
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL     +  A  LF      G   D   YN II GL  A R ++A  LF E   KG 
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGC 860

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
                T  +L++   K+  I+QA +  + + E         ++T
Sbjct: 861 SIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARSWT 904



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 229/535 (42%), Gaps = 24/535 (4%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++ LL+  ++  + +   +++E M       +  T   ++  F+K  ++ +A      
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K  F    + Y  +IG L  ++  +  L L+ +M+  G   +  + + LI   + EG 
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 256 LTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVE 311
           +   +  + ++   N++    +L N  +      G +D A+     M   G  + DV   
Sbjct: 251 VDAAL-SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDV--- 306

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                         ++  +I  L K  +L+ A+ LF  M Q   +   + YN +I G   
Sbjct: 307 --------------TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + + E++Y LL      G  P+  + N +  CL R+  V  AL    +M+ +   P +  
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLST 411

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++I  LCK GK   A      M   G  P+++  +  +  L   +R+D A  +F  + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
              C PD V Y  +I GL +  RV EA  L+ +M+    IP+   Y  LI  + K G  +
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                 + ML +   SPD++   T +D +  AG  +    L+ E++  G  P+  ++  L
Sbjct: 532 DGHKIYNEML-RLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GL K      A   F  MKE+G   D   +  +I  F        A+++L+EM
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/568 (29%), Positives = 267/568 (47%), Gaps = 38/568 (6%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
           Y+ T L++ +C+  +   ALS F +I   G+    V FS LL        V +A     +
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           +     + N   F  L++G  ++ RV +A+ L D+M + G   +   Y  I+ G+CK   
Sbjct: 172 I----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227

Query: 221 LEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLC 276
              AL L  +M+  S I P+  I S +I     +G  T    L  E+ E + ++      
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE-KGISPNLFTY 286

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++    S+G   +A  LL+ M                F+  +SP+  +F ++IN L+K
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREM----------------FERKMSPDVVTFSVLINALVK 330

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +GK   A  L+ EM   G + N   YN++IDG    NRL+ +  +   M   G  P   T
Sbjct: 331 EGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVIT 390

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            + +    C  + V   + L+ +M  +G        T LI   C+ G    A   L +M+
Sbjct: 391 FSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMI 450

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNII 505
             G  P++V  +  + GL +  ++  ALE+F+       D+ A    +   PDV  YNI+
Sbjct: 451 SSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNIL 510

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I GL    + +EAE+L+ EM  +GL+P   TYN +I+G CK   +D+A      M  K  
Sbjct: 511 ICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK-G 569

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            SPDV+T+TTLI+G C  GR  D + ++ EM  +G   N IT+  LI G C+      AL
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSE 653
             F+ M   G+ PD      +++   S+
Sbjct: 630 DIFQEMISSGVYPDTITIRNMLTGLWSK 657



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 238/543 (43%), Gaps = 35/543 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F  LL    +    D    L  +M+   I  N  +F +LI  F   S++  AL  F K+T
Sbjct: 79  FCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKIT 138

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-- 255
           K GF      +  ++ GLC   ++  AL  + ++      P+    + L+     EG   
Sbjct: 139 KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVV 194

Query: 256 --LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             + LL + + +    N +T    +I+  +   G    A NLL+ M   E ++       
Sbjct: 195 EAVALLDRMVEDGLQPNQITY--GTIVDGMCKMGDTVSALNLLRKM---EEVS------- 242

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                 + PN   +  II+ L KDG+   A +LF EM + G   N+F YN +I+G C+S 
Sbjct: 243 -----RIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSG 297

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R  E+  LLREM E    P   T + +   L +      A  L  +M  +G  P      
Sbjct: 298 RWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYN 357

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I    K  +   A R    M  +G  PD++ +S  I G    KRVD  ++L  ++   
Sbjct: 358 SMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   + + Y  +I G C+   +  A DL  EMI+ G+ P+V T N L++G C +G +  A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477

Query: 554 MLCLSRMLEKESG----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +     M + +             PDV TY  LI GL   G+  +A  L+ EM  +G  P
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           + IT+ ++I GLCK  R   A   F  M  KG  PD+  F  LI+ +          EV 
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597

Query: 664 KEM 666
            EM
Sbjct: 598 CEM 600



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 254/555 (45%), Gaps = 49/555 (8%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YS+  L++  C    +        ++   G+     T + LL   C   +  +AL  F
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           ++I     +    F+ L+    + G V +A  L++RM +  ++ N+ T+  ++ G  K  
Sbjct: 170 HQICKPNVI---AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226

Query: 185 RVDKALQLFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
               AL L  KM + S    +  +Y  II GL K+ +   A  L+SEM+  GI+P+    
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + +I      G   E   L++E++E +   DV T ++L N+    LV  G   +A  L  
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA----LVKEGKFFEAEELYN 342

Query: 298 AMIKGEPIA------------------DVGVEM--LMIFKGTVSPNTSSFDIIINTLLKD 337
            M+    I                   D    M  LM  KG  SP+  +F I+I+     
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG-CSPDVITFSILIDGYCGA 401

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++D  + L  EM++ G + N   Y  LI G C    L  + +LL+EM  SG  P   T 
Sbjct: 402 KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTC 461

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQ------GH-----EPWVKHNTLLIKELCKHGKAM 446
           N++   LC    +  AL + + M+         H     EP V+   +LI  L   GK  
Sbjct: 462 NTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA     +M   G +PD + Y++ I GL    R+D A ++F  + + G  PDVV +  +I
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G CK  RV +  ++F EM  +G++ +  TY  LI+G+C+ GNI+ A+     M+   SG
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI--SSG 639

Query: 567 -SPDVITYTTLIDGL 580
             PD IT   ++ GL
Sbjct: 640 VYPDTITIRNMLTGL 654



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 192/381 (50%), Gaps = 26/381 (6%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +D A +L   M++  P+                P    F  ++  +++  + D+ +SL R
Sbjct: 57  LDDAIDLFGYMVRSRPL----------------PCVIDFCKLLGVVVRMERPDVVISLHR 100

Query: 349 --EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             EM +I C  N++ +  LI   C+ ++L  +     ++ + GF P+  T +++   LC 
Sbjct: 101 KMEMRRIPC--NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCV 158

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  AL+   ++     +P V   T L+  LC+ G+ +EA   L  MV++G  P+ + 
Sbjct: 159 EDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 214

Query: 467 YSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           Y   + G+  +     AL L R +       P+VV Y+ II GL K  R  +A++LF+EM
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             KG+ P++ TYN +ING+C SG   +A   L  M E++  SPDV+T++ LI+ L   G+
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKM-SPDVVTFSVLINALVKEGK 333

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +A  L+NEM  +G  PN IT+ ++I G  K +R  AA   F +M  KG  PD+  F  
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  +          ++L EM
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEM 414



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 202/458 (44%), Gaps = 43/458 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN   Y+ +++ L K       +    EMQ+ G   + +T   ++  +C+SG++ +A  +
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E+ +     + V FS+L+ A  K G+  +A EL   M    I  N  T+  +I GF K
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           ++R+D A ++F  M   G + D   + ++I G C  K+++  ++L  EM   G+  +   
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + LI      G L   +  + E     V    + CN+++  L +NG +  A  + + M 
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K +   D            V P+  +++I+I  L+ +GK   A  L+ EM   G + +  
Sbjct: 486 KSKMDLDASHPF-----NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN++IDGLC  +RL+E+ ++   M   GF P   T                        
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF----------------------- 577

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                       T LI   CK G+  +      +M + G + + + Y   I G   +  +
Sbjct: 578 ------------TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNI 625

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           + AL++F+++ + G  PD +    +++GL   + +  A
Sbjct: 626 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 41/230 (17%)

Query: 473 GLIDIKRVDLALELFRDI-------CAHGCC-----------PDVV-------------- 500
           G  +IK +D A++LF  +       C    C           PDVV              
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC 109

Query: 501 ---AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
              ++ I+I   C   ++  A   F ++   G  PS+ T++ L++G C    + +A+   
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            ++ +     P+VI +TTL++GLC  GR  +A+ L + M E G  PN+IT+  ++ G+CK
Sbjct: 170 HQICK-----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 224

Query: 618 CDRPRAALVHFRMMKE-KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                +AL   R M+E   +KP++ ++ A+I     +     A  +  EM
Sbjct: 225 MGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 277/581 (47%), Gaps = 43/581 (7%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M + G+  D++T+       C  G++  AL +     +   +D  + + ++    +    
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER--EDFKLDTVLCTHMISGLMEASYF 58

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A   + RM   +   N  T+  L+ GF+KK ++    ++ + M   G   + ++++ +
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEG----ELTLLVKEIW-E 265
           +   C  K    A +L + M   G  P + + +  I S C  E     +L  L ++I+ E
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 178

Query: 266 DRDVNTMTLLCN--SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
               N +    N  +  R L   G  D+A+ L++ M++               KG V P+
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMR---------------KGFV-PD 222

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           TS++  +I  L    K++ A  LF+EM  +G   +V+ Y  LID  C +  +E++  L  
Sbjct: 223 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 282

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G  PT  T  ++     + + V  A ++  +M   G  P       L+  LCK G
Sbjct: 283 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 342

Query: 444 KAMEAFRFLTDMV----------------QEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
              +AF     ++                +    P++V Y A + GL    +VD A EL 
Sbjct: 343 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 402

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             + + GC P+ + Y+ +I G CKA ++  A+++F +M   G +PSV TY  LI+   K 
Sbjct: 403 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 462

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G +D AM  LS+ML K+S +P+V+TYT +IDGLC  G  + A+ L + MEEKGC+PN +T
Sbjct: 463 GRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           + ALI GL K  +   +L  F  M  KG  P+   +  LI+
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 277/677 (40%), Gaps = 80/677 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L      +EA M F    R   C+PN  +Y  LL    K   +   +  +  M   
Sbjct: 48  MISGLMEASYFDEA-MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 106

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGE----- 150
           G   +      L+  YCN   +  A  + N +   G    +V   + +  S  G+     
Sbjct: 107 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG-SICGQEKLPS 165

Query: 151 ---VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
              +D A ++   M   N  LN+              + DKA QL  +M + GF  D + 
Sbjct: 166 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 225

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I  LC   ++E A  L+ EMK  G+TPD    + LI S    G   L+ +  W   
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG---LIEQAQWLFE 282

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +           MR +  + ++     L+ A +K + +         +      PN  ++
Sbjct: 283 E-----------MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIG----------------CMQNVFLYNNLIDGLCN 371
             +++ L K G +  A  ++ ++                       NV  Y  L+DGLC 
Sbjct: 332 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 391

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +++++ ++ELL  M  SG +P H   +++    C+   +  A  +  +M   G+ P V  
Sbjct: 392 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 451

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T LI  + K G+   A + L+ M+++   P++V Y+A I GL  I   + AL+L   + 
Sbjct: 452 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 511

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             GC P+VV Y  +I GL KA ++  + DLF +M  KG  P+  TY +LIN  C +G +D
Sbjct: 512 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571

Query: 552 QAMLCLSRM--------------------------------LEKESGSPDVITYTTLIDG 579
           +A L L  M                                +E     P    Y  LID 
Sbjct: 572 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDC 631

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRIT-----FMALITGLCKCDRPRAALVHFRMMKEK 634
              AGR + A+ L  EM E    P+ +      + +LI  LC   +   A   +  M  +
Sbjct: 632 FSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688

Query: 635 GMKPDMFVFVALISAFL 651
           G  P++ VFV LI   +
Sbjct: 689 GFVPELSVFVCLIKGLV 705



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 256/595 (43%), Gaps = 78/595 (13%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           +++ + C ++   +    RCL  VG  ++A  L  ++ R+G  VP+  +Y+ ++  LC +
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHA 236

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
             V+   +  +EM+  G   D YT T L+  +C +G  ++A  +F E+   G     V +
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+ A+ K  +V +A ++  RM D   R N+ T+  L+ G  K   + KA +++ K+  
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356

Query: 199 SGFASDA----------------AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  ++D+                  Y  ++ GLCK  +++ A +L   M  SG  P+  +
Sbjct: 357 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
              LI                            C +        G ID A  +   M K 
Sbjct: 417 YDALIDG-------------------------FCKA--------GKIDSAQEVFLQMTKC 443

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             +  V                 ++  +I+ + KDG+LDLA+ +  +M +  C  NV  Y
Sbjct: 444 GYLPSV----------------HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 487

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +IDGLC     E++ +LL  MEE G  P   T  ++   L +   +  +L+L  +M  
Sbjct: 488 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 547

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P      +LI  LC  G   +A   L +M Q  +   +  Y  AI G    K    
Sbjct: 548 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIA 605

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT-----Y 537
           +L +  ++ ++G  P    Y ++I    KA R+  A +L  EM+    +PS        Y
Sbjct: 606 SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMY 662

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
             LI   C +  +++A    S M  +    P++  +  LI GL    + D+A+ L
Sbjct: 663 ASLIQALCLASQVEEAFRLYSEM-TRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 232/511 (45%), Gaps = 87/511 (17%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A +LF ++K  G+  P+ Y+Y  L+++ CK+  ++  +   +EM+  G      T T
Sbjct: 239 VEKAFLLFQEMKMVGV-TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + Q  +A  +F+ ++D G     V +  L+    K G + KA E+  ++   
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        D   +  N  T+  L+ G  K  +VD A +L D M  SG   +  +Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWE 265
           D +I G CK  +++ A +++ +M   G  P     + LI     +G L L +K   ++ +
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 266 DR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           D    +V T T + + + RI    G  ++A  LL                LM  KG  SP
Sbjct: 478 DSCTPNVVTYTAMIDGLCRI----GESEKALKLLS---------------LMEEKG-CSP 517

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+ L K GK+DL+L LF +M++ GC  N   Y  LI+ LC +  L+++  LL
Sbjct: 518 NVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 577

Query: 383 REMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVK---------- 430
            EM+++ + P +      +RC  +   +  + +L ++ +M   G  P             
Sbjct: 578 GEMKQT-YWPKYL---QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFS 633

Query: 431 -----------HNTL----------------LIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                      H  +                LI+ LC   +  EAFR  ++M + GF+P+
Sbjct: 634 KAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPE 693

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +  +   I GL+++K+ D AL+L   IC  G
Sbjct: 694 LSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 120/323 (37%), Gaps = 45/323 (13%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M ESGF    FT+      LC+      AL+++ +   +       H   +I  L +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH---MISGLMEASY 57

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA  FL  M     +P++V Y   + G +  K++     +   +   GC P+   +N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS----------------- 547
           ++   C  +  A A  L N M T G  P    YN+ I   C                   
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 548 ------------------------GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                                   G  D+A   +  M+ K    PD  TY+ +I  LC A
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHA 236

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            + + A +L+ EM+  G  P+  T+  LI   CK      A   F  M+  G  P +  +
Sbjct: 237 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 296

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            ALI A+L     P A ++   M
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRM 319


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 260/557 (46%), Gaps = 52/557 (9%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV-DKACELIERMDDCNIRLN 169
           C+    D AL+ FN ++    +   + F+ LL A  K G+  D    L ++M+   +  N
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T  +LI+ F    RVD A  +  K+ K G       +  +I  LCK  +   A++L+ 
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M   G  PD                             V T T + N + +I    G  
Sbjct: 193 DMVARGCRPD-----------------------------VYTYTTIINGLCKI----GET 219

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
             A  LL+ M       + G +          PN  ++  II++  KD +++ AL +F  
Sbjct: 220 AAAAGLLKKM------EEAGCQ----------PNVVTYSTIIDSHRKDRRVNEALDIFSY 263

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   ++F YN+LI GLCN ++ +E+  LL EM      P   T N +   +C+   
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  +++ M   G EP V   + L+       + +EA +    M+ +G  PD+  Y+ 
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   +KR+D A +LF ++   G  P+ V+YN +I GLC+   + EA +LF  M T G
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            +P++ TY++L++G+CK G   +A   L R ++     P+++ Y  LID +C +G   DA
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFR-LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDA 502

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L++E+  KG  PN   +  +I GLCK      AL  FR M+E G  PD   +  +I  
Sbjct: 503 RKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562

Query: 650 FLSELNPPLAFEVLKEM 666
           FL   +   A +++ EM
Sbjct: 563 FLHHKDESRAVQLIGEM 579



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 231/487 (47%), Gaps = 18/487 (3%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L  Q++  GL  PN Y+ + L+        VDL    L ++   G      T T L+   
Sbjct: 120 LTKQMELAGLS-PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWL 178

Query: 112 CNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+F +A+ +F++++  G   D + ++ ++    K GE   A  L+++M++   + N 
Sbjct: 179 CKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNV 238

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  +I    K  RV++AL +F  M   G + D   Y+ +I GLC   Q + A  L +E
Sbjct: 239 VTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNE 298

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSI 289
           M+   I PD    + L+ +   EG+++       E + V  TMT +   +   +V+  S+
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVS-------EAQGVLKTMTEM--GVEPDVVTYSSL 349

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
              Y+L   +++   + D      MI KG   P+  S++I+IN   K  ++D A  LF E
Sbjct: 350 MYGYSLRSEVVEARKLFDA-----MITKG-CKPDVFSYNILINGYCKVKRIDEAKQLFNE 403

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   N   YN LI GLC    L E+  L + M  +G  P  FT + +    C++  
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGY 463

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              A  L R M+    +P +    +LI  +CK G   +A +  +++  +G  P+   Y+ 
Sbjct: 464 FGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTT 523

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL     +D ALE FR++   GC PD ++YN+II G    +  + A  L  EM  KG
Sbjct: 524 IINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583

Query: 530 LIPSVAT 536
            I  V T
Sbjct: 584 FIADVGT 590



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 234/500 (46%), Gaps = 19/500 (3%)

Query: 104 LTPLLQVYCNSGQF-DKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERM 161
            T LL      GQ+ D  +S+  ++   G     +  SIL+  FS    VD A  ++ ++
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               ++    TF  LI+   K  +  +A++LFD M   G   D   Y  II GLCK  + 
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A  L  +M+ +G  P+    S +I S               +DR VN   L   S M+
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHR-------------KDRRVNE-ALDIFSYMK 265

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           +   +  I    +L+Q +       +    +  +    + P+  +F+++++T+ K+GK+ 
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVS 325

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  + + MT++G   +V  Y++L+ G    + + E+ +L   M   G KP  F+ N + 
Sbjct: 326 EAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILI 385

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              C+ + +  A  L  +M  QG  P  V +NTL I  LC+ G   EA     +M   G 
Sbjct: 386 NGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL-IHGLCQLGSLREARNLFKNMHTNGN 444

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LP++  YS  + G         A  LFR + +    P++V YNI+I  +CK+  + +A  
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF+E+  KGL P+   Y  +ING CK G +D+A+    R +E++   PD I+Y  +I G 
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF-RNMEEDGCPPDEISYNVIIRGF 563

Query: 581 CIAGRPDDAIMLWNEMEEKG 600
                   A+ L  EM +KG
Sbjct: 564 LHHKDESRAVQLIGEMRDKG 583



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 2/226 (0%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R L   ++   C     +   LI     V  ++EA  LF+++  +GL  PNN SYN L+ 
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL-TPNNVSYNTLIH 421

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWV 133
            LC+  S+       K M   G   + +T + LL  +C  G F KA  +F  +   +   
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +  +++IL+ A  K G +  A +L   +    ++ N + +  +I+G  K+  +D+AL+ F
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             M + G   D   Y+VII G   +K    A+QL  EM+  G   D
Sbjct: 542 RNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 168/596 (28%), Positives = 279/596 (46%), Gaps = 54/596 (9%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQ 109
           +L  +++REG  V     ++ L     +   VD V++ L ++   +G   D      LL 
Sbjct: 99  VLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLN 158

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           V     +     +V++E+ + G   + V F+ L+ A  +  +V  A  ++E M    +  
Sbjct: 159 VLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAP 218

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +E TF  L+ GFV++  +  AL++  +M + G +      +V+I G CK  ++E AL   
Sbjct: 219 DETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYI 278

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            +   +G  PD                                  +  N+ +  L  NG 
Sbjct: 279 QQEIANGFEPD---------------------------------QITYNTFVNGLCQNGH 305

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +  A  ++  M++               +G   P+  +++I++N L K+G+L+ A  +  
Sbjct: 306 VGHALKVMDVMVQ---------------EGH-DPDVFTYNIVVNCLCKNGQLEEAKGILN 349

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M + GC+ ++  +N LI  LC+ NRLEE+ +L R++   G  P  +T N +   LC+  
Sbjct: 350 QMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVG 409

Query: 409 DVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           D   AL L  +M+  G  P  V +NTL I  LC  GK  +A   L +M   G     V Y
Sbjct: 410 DPQLALRLFEEMKSSGCTPDEVTYNTL-IDNLCSLGKLGKALDLLKEMESAGCPRSTVTY 468

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I GL    R++ A E+F  +   G   + + +N +I GLCK +R+ +A  L ++MI+
Sbjct: 469 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +GL P+  TYN ++  +CK G+I +A   L  M        DV+TY TLI+GLC AGR  
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDIKKAADILQTM-TANGFEVDVVTYGTLINGLCKAGRTQ 587

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            A+ L   M  KG       +  +I  L + +  R A+  FR M E G  PD F +
Sbjct: 588 VALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTY 643



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 242/503 (48%), Gaps = 19/503 (3%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I+ +   +  L++  V+ S++     ++ +M + G   D   ++ ++  LC+  Q+  A+
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            +  EM  SG+ PD    + L+    +EG +   L VK    +   +   +  N ++   
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G ++ A   +Q  I        G E          P+  +++  +N L ++G +  A
Sbjct: 266 CKLGRVEDALGYIQQEIAN------GFE----------PDQITYNTFVNGLCQNGHVGHA 309

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +   M Q G   +VF YN +++ LC + +LEE+  +L +M E G  P   T N++   
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC    +  AL+L R++ ++G  P V    +LI  LCK G    A R   +M   G  PD
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y+  I  L  + ++  AL+L +++ + GC    V YN II GLCK  R+ EAE++F+
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +M  +G+  +  T+N LI+G CK   ID A   +S+M+  E   P+ ITY +++   C  
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI-SEGLQPNNITYNSILTHYCKQ 548

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G    A  +   M   G   + +T+  LI GLCK  R + AL   R M+ KGM+     +
Sbjct: 549 GDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +     N   A  + +EM
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREM 631



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 244/535 (45%), Gaps = 32/535 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  ++N L++ALC++  V    + L+EM   G   D+ T T L+Q +   G    AL V
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +++ G     V  ++L+  + K G V+ A   I++        ++ T+   ++G  +
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y++++  LCKN QLE A  + ++M   G  PD   
Sbjct: 303 NGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362

Query: 243 LSKLITS-CSD---EGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI + CS    E  L L  +   +    DV T  +L N++ ++    G    A  L 
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKV----GDPQLALRLF 418

Query: 297 QAMIKGEPIAD------------------VGVEMLMIFKGTVSP-NTSSFDIIINTLLKD 337
           + M       D                    +++L   +    P +T +++ II+ L K 
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            +++ A  +F +M   G  +N   +N LIDGLC   R++++ +L+ +M   G +P + T 
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+    C++ D+  A ++++ M   G E  V     LI  LCK G+   A + L  M  
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK-AQRVA 516
           +G       Y+  I  L        A+ LFR++   G  PD   Y I+  GLC+    + 
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIR 658

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES-GSPDV 570
           EA D   EM+ KG IP  +++ +L  G    G  D  +  +  ++EK   G  DV
Sbjct: 659 EAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDV 713



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +  +YN+L++ L   ++++    +  EM E G KP   T N++ + LCR   V  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           + ++ +M   G  P     T L++   + G    A R    M++ G  P  V  +  I G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              + RV+ AL   +   A+G  PD + YN  ++GLC+   V  A  + + M+ +G  P 
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TYN+++N  CK+G +++A   L++M+E+    PD+ T+ TLI  LC   R ++A+ L 
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            ++  KG +P+  TF  LI  LCK   P+ AL  F  MK  G  PD   +  LI    S 
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 654 LNPPLAFEVLKEM 666
                A ++LKEM
Sbjct: 444 GKLGKALDLLKEM 456


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 170/622 (27%), Positives = 296/622 (47%), Gaps = 33/622 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R+     +R + +D+  S C M       LI       L +E   +   +  +    P
Sbjct: 93  LGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKP 152

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + + YN +L  L    ++ LVE+   +M  +G   D  T   L++  C + Q   A+ + 
Sbjct: 153 DTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++  +G V DE  F+ ++  + + G++D A  + E+M +     +  +  V++HGF K+
Sbjct: 213 EDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272

Query: 184 SRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            RV+ AL    +M+ + GF  D   ++ ++ GLCK   ++ A+++   M   G  PD   
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + +I+     GE+   V+ + +   RD +  T+  N+++  L     +++A  L + + 
Sbjct: 333 YNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG + P+  +F+ +I  L       +A+ LF EM   GC  + F
Sbjct: 393 S---------------KGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LID LC+  +L+E+  +L++ME SG   +  T N++    C+   +  A  +  +M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496

Query: 421 RVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI-----GGL 474
            V G     V +NTL I  LCK  +  +A + +  M+ EG  PD   Y++ +     GG 
Sbjct: 497 EVHGVSRNSVTYNTL-IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG- 554

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
            DIK+   A ++ + + ++GC PD+V Y  +ISGLCKA RV  A  L   +  KG+  + 
Sbjct: 555 -DIKK---AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTP 610

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLW 593
             YN +I G  +     +A+     MLE+   +PD ++Y  +  GLC  G P  +A+   
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFL 670

Query: 594 NEMEEKGCAPNRITFMALITGL 615
            E+ EKG  P   +   L  GL
Sbjct: 671 VELLEKGFVPEFSSLYMLAEGL 692



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 258/560 (46%), Gaps = 26/560 (4%)

Query: 114 SGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM-DDCNIRLNEK 171
           SG FD    +  ++ + G  +    F IL+ +++++   D+   ++  M DD  ++ +  
Sbjct: 96  SGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTH 155

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            +  +++  V  + +        KM+  G   D + ++V+I  LC+  QL  A+ +  +M
Sbjct: 156 FYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215

Query: 232 KGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
              G+ PD +  + ++    +EG+L   L ++E   +   +   +  N I+      G +
Sbjct: 216 PSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           + A N +Q M   +                  P+  +F+ ++N L K G +  A+ +   
Sbjct: 276 EDALNFIQEMSNQDGFF---------------PDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M Q G   +V+ YN++I GLC    ++E+ E L +M      P   T N++   LC+   
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELC---KHGKAMEAFRFLTDMVQEGFLPDIVC 466
           V  A  L R +  +G  P V     LI+ LC    H  AME F    +M  +G  PD   
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE---EMRSKGCEPDEFT 437

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I  L    ++D AL + + +   GC   V+ YN +I G CKA ++ EAE++F+EM 
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G+  +  TYN LI+G CKS  ++ A   + +M+  E   PD  TY +L+   C  G  
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI-MEGQKPDKFTYNSLLTHFCRGGDI 556

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             A  +   M   GC P+ +T+  LI+GLCK  R   A    R ++ KG+      +  +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPV 616

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I     +     A  + +EM
Sbjct: 617 IQGLFRKRKTTEAINLFREM 636



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 238/516 (46%), Gaps = 52/516 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++  +L+   + G  D   +++E M +    +    F +LI  + +    D+ L +   M
Sbjct: 85  LYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWM 144

Query: 197 TKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
               G   D   Y+ ++  L     L++    +++M   GI PD                
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPD---------------- 188

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                        V+T  +L  ++ R          A+ L  A++  E +   G+     
Sbjct: 189 -------------VSTFNVLIKALCR----------AHQLRPAILMLEDMPSYGL----- 220

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  +F  I+   +++G LD AL +  +M + GC  +    N ++ G C   R+
Sbjct: 221 -----VPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275

Query: 376 EESYELLREME-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           E++   ++EM  + GF P  +T N++   LC+   V  A+ ++  M  +G++P V     
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK G+  EA  FL  M+     P+ V Y+  I  L    +V+ A EL R + + G
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDV  +N +I GLC  +    A +LF EM +KG  P   TYN+LI+  C  G +D+A+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L +M E    +  VITY TLIDG C A +  +A  +++EME  G + N +T+  LI G
Sbjct: 456 NMLKQM-ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LCK  R   A      M  +G KPD F + +L++ F
Sbjct: 515 LCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHF 550



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 171/353 (48%), Gaps = 5/353 (1%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K   SP  + ++ I+  L + G  D    +  +M   GC      +  LI+        +
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD 135

Query: 377 ESYELLREM-EESGFKP-THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           E   ++  M ++ G KP THF  N M   L    ++        KM V G +P V    +
Sbjct: 136 EILGVVHWMIDDFGLKPDTHF-YNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNV 194

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LIK LC+  +   A   L DM   G +PD   ++  + G I+   +D AL +   +   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQA 553
           C    V+ N+I+ G CK  RV +A +   EM  + G  P   T+N L+NG CK+G++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  +  ML+ E   PDV TY ++I GLC  G   +A+   ++M  + C+PN +T+  LI+
Sbjct: 315 IEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LCK ++   A    R++  KG+ PD+  F +LI       N  +A E+ +EM
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 20/432 (4%)

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           + D ++L  L +   D   L L      +  + +    L   I+  L  +GS D    +L
Sbjct: 48  SSDVKLLDSLRSQADDSAALRLF-NLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKIL 106

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGC 355
           + M       + G EM           TS F I+I +  +    D  L +   M    G 
Sbjct: 107 EDM------KNSGCEM----------GTSPFLILIESYAQFELQDEILGVVHWMIDDFGL 150

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +   YN +++ L + N L+       +M   G KP   T N + + LCR   +  A+ 
Sbjct: 151 KPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           ++  M   G  P  K  T +++   + G    A R    MV+ G     V  +  + G  
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270

Query: 476 DIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              RV+ AL   +++    G  PD   +N +++GLCKA  V  A ++ + M+ +G  P V
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN +I+G CK G + +A+  L +M+ ++  SP+ +TY TLI  LC   + ++A  L  
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDC-SPNTVTYNTLISTLCKENQVEEATELAR 389

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            +  KG  P+  TF +LI GLC     R A+  F  M+ KG +PD F +  LI +  S+ 
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449

Query: 655 NPPLAFEVLKEM 666
               A  +LK+M
Sbjct: 450 KLDEALNMLKQM 461


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 166/551 (30%), Positives = 256/551 (46%), Gaps = 52/551 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC-ELIERMDDCNIRLNEKTFCV 175
           D AL+ FN ++    +   + F+ LL A  K G+   A   L ++M+   +  +  T  +
Sbjct: 76  DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI  F    RVD A  +F KM K G   DA  ++ +I GLCK  +   A++ + + + SG
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             P                              V T T + N + +I             
Sbjct: 196 CQPT-----------------------------VYTYTTIINGLCKI------------- 213

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                 GE  A  G+   M   G   PN  +++I+I++L KD  ++ AL +F  M     
Sbjct: 214 ------GETTAAAGLFKKMEEAG-CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRI 266

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN+LI GLCN  R +E+  LL EM      P  FT N +   +C+   V  A  
Sbjct: 267 SPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQG 326

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           + + M   G EP V   + L+       + +EA +    M+ +G  PD   Y+  I G  
Sbjct: 327 VFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYC 386

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             KR+D A +LF ++   G  PD V YN +I GLC+  R+ EA+DLF  M + G +P + 
Sbjct: 387 KAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLF 446

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L++G+CK G + +A   L R+++     PD+  Y  LID +C  G   DA  L++E
Sbjct: 447 TYSMLLDGFCKEGYLGKAFR-LFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSE 505

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  +G  PN   +  +I  LCK      AL  FR M+  G  PD F +  +I  FL   +
Sbjct: 506 LFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKD 565

Query: 656 PPLAFEVLKEM 666
              A +++ EM
Sbjct: 566 ESRAAQLIGEM 576



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 18/487 (3%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L  Q++  GL  P+ Y+ + L++       VDL      +M   G   D  T   L+   
Sbjct: 117 LSKQMELAGLS-PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGL 175

Query: 112 CNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+F +A+  F++    G     + ++ ++    K GE   A  L ++M++   + N 
Sbjct: 176 CKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV 235

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ +LI    K   V++AL +F  M     + D   Y+ +I GLC  ++ + A  L +E
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSI 289
           M    I P+    + L+ +   EG+++       E + V  TMT +   +   +V+  S+
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVS-------EAQGVFKTMTEM--GVEPDVVTYSSL 346

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
              Y+L   +++   + D      MI KG   P+  S++I+I    K  ++D A  LF E
Sbjct: 347 MYGYSLRMEIVEARKLFDA-----MITKG-CKPDAFSYNILIKGYCKAKRIDEAKQLFNE 400

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +   YN LI GLC   RL E+ +L + M  +G  P  FT + +    C+   
Sbjct: 401 MIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGY 460

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L R M+    +P +    +LI  +CK G   +A +  +++  +G LP++  Y+ 
Sbjct: 461 LGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTT 520

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I  L     +D ALE FR++   GC PD  +YN+II G  + +  + A  L  EM  +G
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580

Query: 530 LIPSVAT 536
            +    T
Sbjct: 581 FVAEAGT 587



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 215/477 (45%), Gaps = 19/477 (3%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           K+M+  G   D YTL+ L+  + +  + D A SVF+++I  G   + V F+ L+    K 
Sbjct: 119 KQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV 178

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+  +A E  +  +    +    T+  +I+G  K      A  LF KM ++G   +   Y
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +++I  LCK+K +  AL ++S MK   I+PD    + LI    +          + E   
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 269 VNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           +N M      N ++  +   G + +A  + + M       ++GVE          P+  +
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM------TEMGVE----------PDVVT 342

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  ++       ++  A  LF  M   GC  + F YN LI G C + R++E+ +L  EM 
Sbjct: 343 YSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P +   N++   LC+   +  A +L + M   G+ P +   ++L+   CK G   
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +AFR    M      PDI  Y+  I  +     +  A +LF ++   G  P+V  Y  II
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           + LCK   + EA + F  M   G  P   +YN++I G+ +  +  +A   +  M ++
Sbjct: 523 NNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 4/231 (1%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
           I   R L   ++   C     +   LI+       ++EA  LF+++  +GL  P+N +YN
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL-TPDNVNYN 414

Query: 71  CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
            L+  LC+   +   +   K M   G   D +T + LL  +C  G   KA  +F  ++  
Sbjct: 415 TLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF-RVMQS 473

Query: 131 GWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            ++  D  +++IL+ A  K+G +  A +L   +    +  N + +  +I+   K+  +D+
Sbjct: 474 TYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           AL+ F  M   G   D   Y+VII G  + K    A QL  EM+  G   +
Sbjct: 534 ALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%)

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           + + +A   FN M+ +  +P +  +  L++   K G    A++ LS+ +E    SPD+ T
Sbjct: 73  RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
            + LID      R D A  ++++M + G  P+ +TF  LI GLCK  +   A+  F   +
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 633 EKGMKPDMFVFVALISA 649
             G +P ++ +  +I+ 
Sbjct: 193 ASGCQPTVYTYTTIING 209


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 176/620 (28%), Positives = 286/620 (46%), Gaps = 54/620 (8%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++  G  GL  +A  L   ++    C P   SYN +L+ L       +V     EM  
Sbjct: 169 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 228

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
            G     YT   +++  C   + D A ++  ++  HG V +  V+  L+ A SK G V++
Sbjct: 229 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNE 288

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             +L+E M       +  TF   IHG  K  R+ +A +L D+M   GF  ++  Y V++ 
Sbjct: 289 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMH 348

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC+  +++ A  L +++                                      N   
Sbjct: 349 GLCRMGKVDEARMLLNKVP-------------------------------------NPNV 371

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +L N+++   VS G +D+A  ++      E +  VG            P+  +++ +I  
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMH-----ESMLSVG----------CGPDIFTYNTLILG 416

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G L  A  L  EM   GC  NV  Y  LID  C   RLEE+  +L EM   G    
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N +   LC+ + V  ALN+   M  +G +P +     LI  LCK  K  EA     
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM+ EG + + + Y+  I   +    +  AL+L  D+   GC  D + YN +I  LC+A 
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + +   LF +M++KGL P+  + N+LING C++GNI  A+  L  M+ +   +PD++TY
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR-GLTPDIVTY 655

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            +LI+GLC  GR  +A+ L+++++ +G  P+ IT+  LI+  CK      A +      +
Sbjct: 656 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715

Query: 634 KGMKPDMFVFVALISAFLSE 653
            G  P+   +  L+S F+ E
Sbjct: 716 SGFIPNEVTWYILVSNFIKE 735



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 242/527 (45%), Gaps = 35/527 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L  V  V+ A  L   + R G CVPN   Y  L+ AL K   V+ V   L+E
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALSKVGRVNEVLKLLEE 295

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T    +   C   +  +A  + + ++  G+  +   + +L+    + G+
Sbjct: 296 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 355

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
           VD+A  L+ ++ + N+ L    F  LI+G+V + R+D+A   + + M   G   D   Y+
Sbjct: 356 VDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 411

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCK   L  A +L +EM+  G  P+    + LI     EG L        E R+V
Sbjct: 412 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE-------EARNV 464

Query: 270 ----NTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEML--MIFKGTVSP 322
               +   L  N++             YN L+ A+ K E + D  + M   M  KG   P
Sbjct: 465 LDEMSGKGLALNAV------------GYNCLISALCKDEKVQD-ALNMFGDMSSKGC-KP 510

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +F+ +I  L K  K + AL L+++M   G + N   YN LI        ++E+ +L+
Sbjct: 511 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 570

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M   G      T N + + LCR  ++   L L   M  +G  P      +LI  LC+ 
Sbjct: 571 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 630

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A  FL DM+  G  PDIV Y++ I GL    R   AL LF  +   G CPD + Y
Sbjct: 631 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 690

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           N +IS  CK     +A  L +  +  G IP+  T+ +L++ + K G+
Sbjct: 691 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 199/390 (51%), Gaps = 9/390 (2%)

Query: 280 MRILVSNGSIDQAYNL-LQAMIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           MR + S     ++YN+ L  ++ G  P     V   M+ KG +SP   +F +++  L   
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKG-ISPTVYTFGVVMKALCLV 248

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++D A +L ++MT+ GC+ N  +Y  LI  L    R+ E  +LL EM   G  P   T 
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N     LC+   +  A  LV +M ++G  P      +L+  LC+ GK  EA R L + V 
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA-RMLLNKVP 367

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVA 516
               P++V ++  I G +   R+D A  +  + + + GC PD+  YN +I GLCK   + 
Sbjct: 368 N---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 424

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +L NEM  KG  P+V TY +LI+ +CK G +++A   L  M  K   + + + Y  L
Sbjct: 425 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGYNCL 483

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I  LC   +  DA+ ++ +M  KGC P+  TF +LI GLCK ++   AL  ++ M  +G+
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   +  LI AFL       A +++ +M
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDM 573



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 231/568 (40%), Gaps = 93/568 (16%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V+ +L+      GE      L+ +M    I   E  F +++  + +     +A +L   M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 197 T-----KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
                 +  F S   + DV++ G C     ++   ++ EM   GI+P             
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCP----KVVPNVFYEMLSKGISPTVYTFG------- 239

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                                      +M+ L     +D A  LL+ M +          
Sbjct: 240 --------------------------VVMKALCLVNEVDSACALLKDMTR---------- 263

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                 G V PN   +  +I+ L K G+++  L L  EM  +GC+ +V  +N+ I GLC 
Sbjct: 264 -----HGCV-PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM----------- 420
             R+ E+ +L+  M   GF P  FT   +   LCR   V  A  L+ K+           
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL 377

Query: 421 -------------RVQGHEPWVK---------HNTLLIKELCKHGKAMEAFRFLTDMVQE 458
                        +   HE  +          +NTL++  LCK G  + A   + +M  +
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG-LCKKGYLVSARELMNEMQIK 436

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+++ Y+  I       R++ A  +  ++   G   + V YN +IS LCK ++V +A
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++F +M +KG  P + T+N LI G CK    ++A+     ML  E    + ITY TLI 
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIH 555

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                G   +A+ L N+M  +GC  + IT+  LI  LC+       L  F  M  KG+ P
Sbjct: 556 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +      LI+      N   A E L++M
Sbjct: 616 NNISCNILINGLCRTGNIQHALEFLRDM 643



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 2/169 (1%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D++   C +       LI+ L   G +E+   LF+ +  +GL  PNN S N L+  L
Sbjct: 569 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN-PNNISCNILINGL 627

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DE 135
           C++ ++      L++M   G   D  T   L+   C +G+  +AL++F+++   G   D 
Sbjct: 628 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 687

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             ++ L+    K G  D A  L+ R  D     NE T+ +L+  F+K+ 
Sbjct: 688 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 1/172 (0%)

Query: 480 VDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           V  ++ELF+      G C     Y ++I  L  A      + L  +M  +G++   + + 
Sbjct: 109 VPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFI 168

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           L++  + ++G   QA   L  M    S  P   +Y  ++D L     P     ++ EM  
Sbjct: 169 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 228

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           KG +P   TF  ++  LC  +   +A    + M   G  P+  V+  LI A 
Sbjct: 229 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 306/635 (48%), Gaps = 26/635 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           L+R L   G VE A  L D+VK  G C+ P+   YN  ++   K+ +VD+      E++ 
Sbjct: 223 LVRALAREGRVEGALALVDEVK--GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS 280

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDK 153
            G   D  + T ++ V C +G+  +A  +F ++     V   + ++ +++ +   G+ + 
Sbjct: 281 QGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFEN 340

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L++++ +     +  +F  ++    KK +VD+AL LF+ M K     +++ Y++II 
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIID 399

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNT 271
            LC   ++E A  +  EM+ +G+ P+   ++ ++     + + E    + E    R  N 
Sbjct: 400 MLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++   S++  L   G++D AY L + M+      D G           + N   +  +I
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENML------DTGH----------NANPVVYTSLI 503

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                 G+ +    +F+EM + GC  ++ L N  +D +  +  +E+   +  +++  GF 
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + + +   L +        ++   M+ QG     +    ++   CK GK  +A+  
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV 623

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M  +   P +  Y + I GL  I R+D A  LF +  + G   +V+ Y+ +I G  K
Sbjct: 624 LEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGK 683

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  +  EM+ KGL P+V T+N L++   K+  I++A++C   M E +  SP+  
Sbjct: 684 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC-SPNTY 742

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY+ LI+GLC   + + A + W EM+++G  PN +T+  +I GL K      A   F   
Sbjct: 743 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPL-AFEVLKE 665
           K  G  PD   F ALI   +S  N  + A+ V +E
Sbjct: 803 KANGGTPDAASFNALIEG-MSHANRAIEAYHVFEE 836



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/626 (27%), Positives = 287/626 (45%), Gaps = 33/626 (5%)

Query: 68  SYNCLLEALCKSCSVDLVEMR--LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
           +YN +L  L    S DL  M   L+EM   G+G        L+     + + D A  V  
Sbjct: 116 AYNAVLPFL----SHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIA 171

Query: 126 EIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
            +    +      +++L+ A ++  + ++A EL+ +M +    +    F  L+    ++ 
Sbjct: 172 AMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREG 231

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           RV+ AL L D++  S    D  +Y+V I    K   ++MA + + E+K  G+ PD    +
Sbjct: 232 RVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYT 291

Query: 245 KLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            +I      G L+    L  ++  +R V       N+++    S G  + AY LL  + +
Sbjct: 292 SMIWVLCKAGRLSEAEELFGQMETERAV-PCAYAYNTMIMGYGSAGQFENAYKLLDQLKE 350

Query: 302 GEPIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLA 343
              I  V                 E L +F   K    PN+S+++III+ L   GK++ A
Sbjct: 351 RGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEA 410

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             +  EM   G   N+   N ++D LC + + E +YE+     + G  P   T  S+   
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           L ++ +V  A  L   M   GH       T LI+    HG+  +  +   +M + G  PD
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +   +  +  +     V+    +F DI  +G  PDV +Y+I+I GL KA +  E   +F+
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M  +G       YN +++G+CKSG +D+A   L  M  K    P V TY ++IDGL   
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV-PPTVATYGSIIDGLAKI 649

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            R D+A ML+ E + KG   N I + +LI G  K  R   A +    M +KG+ P+++ +
Sbjct: 650 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 709

Query: 644 VALISAFLS--ELNPPL-AFEVLKEM 666
            +L+ A +   E+N  L  F+ +KEM
Sbjct: 710 NSLMDALVKAEEINEALICFQSMKEM 735



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/615 (26%), Positives = 291/615 (47%), Gaps = 26/615 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I C G  G V+ A   F ++K +GL  P++ SY  ++  LCK+  +   E    +M+   
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQGL-KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
                Y    ++  Y ++GQF+ A  + +++ + G +   V F+ +L    K  +VD+A 
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L E M   +   N  T+ ++I       +V++A  + D+M  +G   +    ++++  L
Sbjct: 378 TLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMT 273
           CK K+ E A +++      G  P+      LI     +G +    +  E   D   N   
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV---GVEMLMIFK-GTVS-------- 321
           ++  S++R    +G  +  + + + M +     D+      M  +FK G V         
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 322 -------PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  P+  S+ I+I+ L K G+     S+F  M Q G   +   YN ++DG C S +
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L+++YE+L EM+     PT  T  S+   L +   +  A  L  + + +G E  V   + 
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI    K G+  EA+  L +M+++G  P++  +++ +  L+  + ++ AL  F+ +    
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+   Y+I+I+GLC+ Q+  +A   + EM  +GL+P+V TY  +I G  K GNI  A 
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               R  +   G+PD  ++  LI+G+  A R  +A  ++ E   KGC  N    ++L+  
Sbjct: 797 SLFER-FKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA 855

Query: 615 LCKCD-RPRAALVHF 628
           L K +   +AA+V F
Sbjct: 856 LNKAECLEQAAVVGF 870


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 293/598 (48%), Gaps = 25/598 (4%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           +G ++R LG +  +     LFD + R+     + ++YNC L+AL K+ +  L   + ++M
Sbjct: 8   VGEVLRHLGKISTIVR---LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEV 151
           Q  G+  D +T + +L+  C +G+ DKA  +  ++ + G  ++   +S+++    K   V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 152 DKACELIERMDDCNIRLNEK-TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           D A E+ + M      + +  TF  L+ G     R+ +A  LF+ M K+G   +   Y  
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV----KEIWED 266
           ++ GLCK  +L+ A +L+ EM      PD    +  +T       +        K + + 
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS----P 322
              + +    ++++ IL   G  ++A N +   +    + D   E    F+  +S    P
Sbjct: 245 SKADAVAF--STVIGILCKKGHAEEAQNQMIEHLCRSGMLD---EACKTFEEMISRNHPP 299

Query: 323 NTSSFDIIINTLLKDGKLDLALSLF---REMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +   F+ +I+ + K  +L   + LF   + M +  C  N+  YN ++D LC + +L+E+ 
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           EL+ EM   G  P   T +++   LC+   +  A +L+ +M  +G  P    +  ++  L
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K GK   A   L  M   G  PD+V Y+  + GL    R+D A+     + A  C PDV
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            +Y III+ LC++ + A A  +F EM+ +G++P    Y+ L++G  ++G  D A+  L  
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            L K    PD + +  ++DGLC AG+ +DA  +   M + G   +  T++++++GL K
Sbjct: 540 SLCK----PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRK 593



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 243/513 (47%), Gaps = 34/513 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+   +    K +    A + F +M + G+  D   Y +++ GLCK  +L+ A +L  ++
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + SG+  +    S +I  C     +   + EI++     TM+     +  ++  N     
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDAL-EIFK-----TMSSGGGCVPDVVTFN----- 148

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             +LL+ +  GE +++  V    + K    PN  S+  +++ L K G+LD A  L+ EM 
Sbjct: 149 --SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL-------------- 397
           +  C+ ++  Y + + GLC +NR+ E+ +  R+M   G K                    
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 398 ---NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA---FRF 451
              N M   LCR   +  A     +M  + H P  +    LI  +CK  +  +    F+ 
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +  M +    P++  Y+  +  L   K++D A EL  ++  +G  PDVV Y+ ++ GLCK
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             ++  A DL  EM  +G+ P   T   ++N   K+G +D A+  L  M  + S +PD++
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS-TPDLV 445

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY TL+DGLC AGR D+AI    +M    C P+  ++  +IT LC+  +   A   F+ M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            ++G+ PD  ++ +L+          LA E+LK
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G++  V      +  L K      A+     M + G+ PD   YS  + GL     +
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSVATYNL 539
           D A EL   +   G   +V+ Y+++I G CKA RV +A ++F  M + G  +P V T+N 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L+ G C    + +A + L   + K    P+VI+Y+TL+DGLC AGR D+A  LW EM EK
Sbjct: 150 LLKGLCSGERMSEAFV-LFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            C P+ + + + +TGLCK +R   A    R M  KG K D   F  +I
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 44/491 (8%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L    R++   VL + + K+ C  +  +   L+  L   G ++EA  L++++  E  CVP
Sbjct: 154 LCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV-EKSCVP 212

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +Y   +  LCK+  V       ++M   G   D    + ++ + C  G  ++A    
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--- 269

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           N++I+H                + G +D+AC+  E M   N   + + F  LIH   K  
Sbjct: 270 NQMIEH--------------LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 185 RVDKALQLFDKMT--KSGF-ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           R+   + LF +M   K  +   +   Y++++  LCK KQL+ A +L +EM   G++PD  
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 242 ILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             S L+      G+L     L++E+ ++  V   +    SI+  L   G +D A + L+ 
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLET 434

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M                 +G+ +P+  +++ +++ L K G++D A++   +M    C  +
Sbjct: 435 MKA---------------RGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           VF Y  +I  LC S +   ++ + +EM + G  P     +S+   L R      AL L++
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
               +   P    + +++  LCK GKA +A   +  M   GF  D   Y + + GL  + 
Sbjct: 539 TSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLG 595

Query: 479 RVDLALELFRD 489
           +VD A +L  D
Sbjct: 596 KVDKARQLVDD 606



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 34/197 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++  L   G V+ A    + +K  G   P+  +YN LL+ LCK+  +D     L +M   
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARG-STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF----------------- 138
               D ++ T ++   C SGQ   A ++F E++  G + + V                  
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533

Query: 139 ----------------SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                            ++L    K G+ + ACE++ERM D     +  T+  ++ G  K
Sbjct: 534 LELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRK 593

Query: 183 KSRVDKALQLFDKMTKS 199
             +VDKA QL D  +++
Sbjct: 594 LGKVDKARQLVDDASET 610



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 41/97 (42%)

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V TY   +D L  A     A   + +M+ +G  P+  T+  ++ GLCK      A     
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++E G+K ++  +  +I           A E+ K M
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 286/609 (46%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L+    ++  +D   +  +EM D G+  D YTL   + + C +G++ +AL++
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +  +   +D  +++ ++    +    ++A + + RM   +   N  T+ +L+ G ++K
Sbjct: 290 IEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +  ++   M   G      +++ +I   C++     A +L  +M   G  P + + 
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 244 SKLITS-CSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + LI   C +E   +L V E+ E       D  V    +  +++ R L   G  ++AY++
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M+                KG + P+TS++  +I  L    K+D A  LF EM     
Sbjct: 468 IREMMS---------------KGFI-PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +VF Y  LID  C    L+++ +   EM   G  P   T  ++     + + +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD------------ 463
           L   M  +G  P V   T LI   CK G+  +A +    M     +PD            
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 464 ----IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               I  Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CK  ++ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F +M  +G  P+V TY+ LI+   K   +D A+  LSRMLE  S +P+VI YT +IDG
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDG 750

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+ D+A  L + MEEKGC PN +T+ A+I G  K  +    L   R M  KG  P+
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 811 FVTYRVLIN 819



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 179/668 (26%), Positives = 289/668 (43%), Gaps = 100/668 (14%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY----CNSGQFDKALSVF 124
           Y+ LLE L    +  + E  L+E++D     DK  L  LL V     C +G ++ AL   
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEEL 220

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + D G+    + ++ L+  F +   +D A  +   M D    ++  T    +H   K 
Sbjct: 221 GRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKA 280

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R  +AL L +K     F  D  +Y  +I GLC+    E A+   S M+ S   P+    
Sbjct: 281 GRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTY 337

Query: 244 SKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             L+  C  + +L         ++ +  +  R +       NS++     +G    AY L
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI------FNSLIHAYCRSGDYSYAYKL 391

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL------DLALSLFRE 349
           L+ M       D G +          P    ++I+I  +  + KL      +LA   + E
Sbjct: 392 LKKM------GDCGCQ----------PGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M     + N    +NL   LC + + E++Y ++REM   GF P   T + +   LC    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  L  +M+     P V   T+LI   CK G   +A ++  +MV++G  P++V Y+A
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG--------------------- 508
            I   +  +++  A ELF  + + GC P+VV Y  +I G                     
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 509 ------------------------------LCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
                                         LCKA +V EA DL + M  +G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI+G+CK G +D+A +  ++M E+  G P+V TY++LID L    R D A+ + + M E
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYG-PNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
             CAPN I +  +I GLCK  +   A     MM+EKG  P++  + A+I  F        
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 659 AFEVLKEM 666
             E++++M
Sbjct: 795 CLELMRQM 802



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 172/655 (26%), Positives = 292/655 (44%), Gaps = 75/655 (11%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R R++   + +   ++   C+ S      LI      G    A  L  ++   G C P  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG-CQPGY 404

Query: 67  YSYNCLLEALC---KSCSVDLVEMRLK---EMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             YN L+  +C   K  S+D++E+  K   EM D     +K  ++ L +  C +G+F+KA
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            S+  E++  G++ D   +S ++       +VD A  L E M   ++  +  T+ +LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K   + +A + FD+M + G A +   Y  +I    K +++  A +L+  M   G  P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI     +G                     C S        G I++A  +   M
Sbjct: 585 VVTYTALI-----DGH--------------------CKS--------GQIEKACQIYARM 611

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I DV +   +       PN  ++  +++ L K  K+  A  L   M+  GC  N 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y+ LIDG C   +L+E+  +  +M E G+ P  +T +S+   L + + +  AL ++ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M      P V   T +I  LCK GK  EA+R ++ M ++G  P++V Y+A I G     +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-------------- 525
           VD  LEL R + A GC P+ V Y ++I+  C A  + +A  L +EM              
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 526 ----------ITKGL---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
                     I+ GL         +P +  Y +LI+ +CK+G ++ A+     M    S 
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSY 911

Query: 567 S-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           S  D   Y++LI+ L +A + D A  L+ +M ++G  P    F  L+ GL + +R
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 9/295 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VG ++EA M+F ++   G   PN Y+Y+ L++ L K   +DL    L  M + 
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYG-PNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               +    T ++   C  G+ D+A  + + + + G     V ++ ++  F K G+VDK 
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+ +M       N  T+ VLI+       +D A QL D+M ++ +    A Y  +I G
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
              N++  ++L L  E+  +   P       LI S    G L L ++         + + 
Sbjct: 856 F--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSA 913

Query: 275 ----LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
               L +S++  L     +D+A+ L   MIK   I ++ +   ++ KG +  N +
Sbjct: 914 ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLV-KGLIRINRT 967


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 286/609 (46%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L+    ++  +D   +  +EM D G+  D YTL   + + C +G++ +AL++
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +  +   +D  +++ ++    +    ++A + + RM   +   N  T+ +L+ G ++K
Sbjct: 290 IEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +  ++   M   G      +++ +I   C++     A +L  +M   G  P + + 
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 244 SKLITS-CSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + LI   C +E   +L V E+ E       D  V    +  +++ R L   G  ++AY++
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M+                KG + P+TS++  +I  L    K+D A  LF EM     
Sbjct: 468 IREMMS---------------KGFI-PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +VF Y  LID  C    L+++ +   EM   G  P   T  ++     + + +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD------------ 463
           L   M  +G  P V   T LI   CK G+  +A +    M     +PD            
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 464 ----IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               I  Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CK  ++ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F +M  +G  P+V TY+ LI+   K   +D A+  LSRMLE  S +P+VI YT +IDG
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDG 750

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+ D+A  L + MEEKGC PN +T+ A+I G  K  +    L   R M  KG  P+
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 811 FVTYRVLIN 819



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 180/668 (26%), Positives = 291/668 (43%), Gaps = 100/668 (14%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY----CNSGQFDKALSVF 124
           Y+ LLE L    +  + E  L+E++D     DK  L  LL V     C +G ++ AL   
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEEL 220

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + D G+    + ++ L+  F +   +D A  +   M D    ++  T    +H   K 
Sbjct: 221 GRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKA 280

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R  +AL L +K     F  D  +Y  +I GLC+    E A+   S M+ S   P+    
Sbjct: 281 GRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTY 337

Query: 244 SKLITSCSDEGEL-------TLLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             L+  C  + +L       ++++ E  +  R +       NS++     +G    AY L
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI------FNSLIHAYCRSGDYSYAYKL 391

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL------DLALSLFRE 349
           L+ M       D G +          P    ++I+I  +  + KL      +LA   + E
Sbjct: 392 LKKM------GDCGCQ----------PGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M     + N    +NL   LC + + E++Y ++REM   GF P   T + +   LC    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  L  +M+     P V   T+LI   CK G   +A ++  +MV++G  P++V Y+A
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG--------------------- 508
            I   +  +++  A ELF  + + GC P+VV Y  +I G                     
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 509 ------------------------------LCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
                                         LCKA +V EA DL + M  +G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI+G+CK G +D+A +  ++M E+  G P+V TY++LID L    R D A+ + + M E
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYG-PNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
             CAPN I +  +I GLCK  +   A     MM+EKG  P++  + A+I  F        
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 659 AFEVLKEM 666
             E++++M
Sbjct: 795 CLELMRQM 802



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 294/660 (44%), Gaps = 75/660 (11%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R R++   + +   ++   C+ S      LI      G    A  L  ++   G C P  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG-CQPGY 404

Query: 67  YSYNCLLEALC---KSCSVDLVEMRLK---EMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             YN L+  +C   K  S+D++E+  K   EM D     +K  ++ L +  C +G+F+KA
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            S+  E++  G++ D   +S ++       +VD A  L E M   ++  +  T+ +LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K   + +A + FD+M + G A +   Y  +I    K +++  A +L+  M   G  P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI     +G                     C S        G I++A  +   M
Sbjct: 585 VVTYTALI-----DGH--------------------CKS--------GQIEKACQIYARM 611

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I DV +   +       PN  ++  +++ L K  K+  A  L   M+  GC  N 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y+ LIDG C   +L+E+  +  +M E G+ P  +T +S+   L + + +  AL ++ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M      P V   T +I  LCK GK  EA+R ++ M ++G  P++V Y+A I G     +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-------------- 525
           VD  LEL R + A GC P+ V Y ++I+  C A  + +A  L +EM              
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 526 ----------ITKGL---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
                     I+ GL         +P +  Y +LI+ +CK+G ++ A+     M    S 
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911

Query: 567 S-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
           S  D   Y++LI+ L +A + D A  L+ +M ++G  P    F  L+ GL + +R   AL
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 222/499 (44%), Gaps = 44/499 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A +LF+++K   + VP+ ++Y  L+++ CK   +        EM   G   +  T T
Sbjct: 496 VDNAFLLFEEMKSNHV-VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V ++ L+    K G+++KAC++  RM   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 162 ------------DDCNIR-LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                       DD NIR  N  T+  L+ G  K  +V +A  L D M+  G   +  +Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D +I G CK  +L+ A  ++++M   G  P+    S LI     +  L L +K +    +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  ++   ++  L   G  D+AY L                M M+ +    PN  +
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRL----------------MSMMEEKGCHPNVVT 778

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K GK+D  L L R+M   GC  N   Y  LI+  C +  L+++++LL EM+
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 387 ESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ++ + P H    + +R +     ++ + +L L+ ++      P +    +LI   CK G+
Sbjct: 839 QT-YWPKHM---AGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGR 894

Query: 445 AMEAFRFLTDMVQ--EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
              A     +M         D   YS+ I  L    +VD A EL+ D+   G  P++  +
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 503 NIIISGLCKAQRVAEAEDL 521
             ++ GL +  R  EA  L
Sbjct: 955 FYLVKGLIRINRWEEALQL 973


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 286/609 (46%), Gaps = 43/609 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L+    ++  +D   +  +EM D G+  D YTL   + + C +G++ +AL++
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALAL 289

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +  +   +D  +++ ++    +    ++A + + RM   +   N  T+ +L+ G ++K
Sbjct: 290 IEK--EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRK 347

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +  ++   M   G      +++ +I   C++     A +L  +M   G  P + + 
Sbjct: 348 RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVY 407

Query: 244 SKLITS-CSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + LI   C +E   +L V E+ E       D  V    +  +++ R L   G  ++AY++
Sbjct: 408 NILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSI 467

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M+                KG + P+TS++  +I  L    K+D A  LF EM     
Sbjct: 468 IREMMS---------------KGFI-PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +VF Y  LID  C    L+++ +   EM   G  P   T  ++     + + +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD------------ 463
           L   M  +G  P V   T LI   CK G+  +A +    M     +PD            
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 464 ----IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               I  Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CK  ++ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F +M  +G  P+V TY+ LI+   K   +D A+  LSRMLE  S +P+VI YT +IDG
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDG 750

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+ D+A  L + MEEKGC PN +T+ A+I G  K  +    L   R M  KG  P+
Sbjct: 751 LCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810

Query: 640 MFVFVALIS 648
              +  LI+
Sbjct: 811 FVTYRVLIN 819



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 179/668 (26%), Positives = 289/668 (43%), Gaps = 100/668 (14%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY----CNSGQFDKALSVF 124
           Y+ LLE L    +  + E  L+E++D     DK  L  LL V     C +G ++ AL   
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEEL 220

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + D G+    + ++ L+  F +   +D A  +   M D    ++  T    +H   K 
Sbjct: 221 GRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKA 280

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R  +AL L +K     F  D  +Y  +I GLC+    E A+   S M+ S   P+    
Sbjct: 281 GRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTY 337

Query: 244 SKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             L+  C  + +L         ++ +  +  R +       NS++     +G    AY L
Sbjct: 338 RILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI------FNSLIHAYCRSGDYSYAYKL 391

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL------DLALSLFRE 349
           L+ M       D G +          P    ++I+I  +  + KL      +LA   + E
Sbjct: 392 LKKM------GDCGCQ----------PGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M     + N    +NL   LC + + E++Y ++REM   GF P   T + +   LC    
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  L  +M+     P V   T+LI   CK G   +A ++  +MV++G  P++V Y+A
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG--------------------- 508
            I   +  +++  A ELF  + + GC P+VV Y  +I G                     
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615

Query: 509 ------------------------------LCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
                                         LCKA +V EA DL + M  +G  P+   Y+
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI+G+CK G +D+A +  ++M E+  G P+V TY++LID L    R D A+ + + M E
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYG-PNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
             CAPN I +  +I GLCK  +   A     MM+EKG  P++  + A+I  F        
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 659 AFEVLKEM 666
             E++++M
Sbjct: 795 CLELMRQM 802



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 294/660 (44%), Gaps = 75/660 (11%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R R++   + +   ++   C+ S      LI      G    A  L  ++   G C P  
Sbjct: 346 RKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG-CQPGY 404

Query: 67  YSYNCLLEALC---KSCSVDLVEMRLK---EMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             YN L+  +C   K  S+D++E+  K   EM D     +K  ++ L +  C +G+F+KA
Sbjct: 405 VVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKA 464

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            S+  E++  G++ D   +S ++       +VD A  L E M   ++  +  T+ +LI  
Sbjct: 465 YSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDS 524

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K   + +A + FD+M + G A +   Y  +I    K +++  A +L+  M   G  P+
Sbjct: 525 FCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPN 584

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI     +G                     C S        G I++A  +   M
Sbjct: 585 VVTYTALI-----DGH--------------------CKS--------GQIEKACQIYARM 611

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I DV +   +       PN  ++  +++ L K  K+  A  L   M+  GC  N 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y+ LIDG C   +L+E+  +  +M E G+ P  +T +S+   L + + +  AL ++ +
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M      P V   T +I  LCK GK  EA+R ++ M ++G  P++V Y+A I G     +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-------------- 525
           VD  LEL R + A GC P+ V Y ++I+  C A  + +A  L +EM              
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 526 ----------ITKGL---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
                     I+ GL         +P +  Y +LI+ +CK+G ++ A+     M    S 
Sbjct: 852 VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSY 911

Query: 567 S-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
           S  D   Y++LI+ L +A + D A  L+ +M ++G  P    F  L+ GL + +R   AL
Sbjct: 912 SAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 231/525 (44%), Gaps = 51/525 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A +LF+++K   + VP+ ++Y  L+++ CK   +        EM   G   +  T T
Sbjct: 496 VDNAFLLFEEMKSNHV-VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V ++ L+    K G+++KAC++  RM   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 162 ------------DDCNIR-LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                       DD NIR  N  T+  L+ G  K  +V +A  L D M+  G   +  +Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D +I G CK  +L+ A  ++++M   G  P+    S LI     +  L L +K +    +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  ++   ++  L   G  D+AY L                M M+ +    PN  +
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRL----------------MSMMEEKGCHPNVVT 778

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K GK+D  L L R+M   GC  N   Y  LI+  C +  L+++++LL EM+
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 387 ESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ++ + P H    + +R +     ++ + +L L+ ++      P +    +LI   CK G+
Sbjct: 839 QT-YWPKHM---AGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGR 894

Query: 445 AMEAFRFLTDMVQ--EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
              A     +M         D   YS+ I  L    +VD A EL+ D+   G  P++  +
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 503 NIIISGLCKAQRVAEAEDLFN-------EMITKGLIPSVATYNLL 540
             ++ GL +  R  EA  L +       + + +G + S   Y  L
Sbjct: 955 FYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGSSHDYEFL 999


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 271/557 (48%), Gaps = 36/557 (6%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + F+ LL+   K+  V  A  +  ++    ++ +  TF  +I+   KK +V +A+ +F+K
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           + +     DA  Y  +I G C+N++L+ A +++  M   G  P+    S LI    +EG 
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282

Query: 255 --ELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-------- 301
             E   +++E+ E   +  V T T+  +S+  I    G +D A NL+++M K        
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI----GRVDDAINLVRSMGKKGCSPSVQ 338

Query: 302 ------------GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                       G+    +G+   M+ +G V PNT +++ +IN L  +G+  +AL +F  
Sbjct: 339 TYTAIISGLFRAGKMELAIGMYHKMLKEGLV-PNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G + N   YN +I GL   + +E++  +  +M + G  PT  T N++     +R  
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A   +  M+    EP  +    LI   CK GK   A  F  +M++ G  P+   Y+A
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G     ++D+AL LF  +  +GC   +  YN IISGL K  R +EAE    +M  +G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P+  TY  LING CK+   + A      M EK++  P+  TYT+LI GLC  G+ D A
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEM-EKKNCLPNAHTYTSLIYGLCQEGKVDAA 636

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
                 + E GC P   T+  L++GLC+  R   A      MKEKG+ P M ++ +L+ A
Sbjct: 637 ----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692

Query: 650 FLSELNPPLAFEVLKEM 666
               L    A E+   M
Sbjct: 693 HCKSLKVDCALEIFNLM 709



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 163/630 (25%), Positives = 279/630 (44%), Gaps = 25/630 (3%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           LG   +V  A  ++ Q+   G+  P+  ++N ++  LCK   V    +   ++  +    
Sbjct: 172 LGKFDMVTSAQNVYAQIFSSGV-KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCP 230

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D +T T L+  +C + + DKA  VF+ ++  G     V +S L+      G + +A +++
Sbjct: 231 DAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDML 290

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E M +  I     T+ V I       RVD A+ L   M K G +     Y  II GL + 
Sbjct: 291 EEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRA 350

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLC 276
            ++E+A+ +Y +M   G+ P+    + LI     EG   + +K  +  E           
Sbjct: 351 GKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTY 410

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N I++ L     I++A  +   M+K  P                SP   +++ +I   LK
Sbjct: 411 NQIIKGLFGMDDIEKAMVVFNKMLKDGP----------------SPTVVTYNTLIVENLK 454

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G L+ A      M +  C  +   Y  LI G C   +L+ +     EM + G  P  +T
Sbjct: 455 RGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWT 514

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             +M    C+   +  AL+L  +M   G    ++    +I  L K  +  EA +F   M 
Sbjct: 515 YTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMT 574

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           ++G  P+ + Y++ I GL      +LA ++F ++    C P+   Y  +I GLC+  +V 
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE L       G  P++ TY+ L++G C+ G  ++A   +  M EK   SP +  Y +L
Sbjct: 635 AAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK-GLSPSMEIYCSL 689

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +   C + + D A+ ++N M  KG  P+   +  LI  LC   R   AL  F+ + +K  
Sbjct: 690 LVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQW 749

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             D+ V+  L+   L E +  L  + L  M
Sbjct: 750 NSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 285/617 (46%), Gaps = 30/617 (4%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L F  +I  L   G V+EA ++F+++ +  LC P+ ++Y  L+   C++  +D  
Sbjct: 193 VKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC-PDAFTYTSLILGHCRNRKLDKA 251

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
                 M   G   +  T + L+   CN G+  +A+ +  E+ + G     + +++ + +
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G VD A  L+  M       + +T+  +I G  +  +++ A+ ++ KM K G   +
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLV-K 261
              Y+ +I  LC   +  +AL+++  M+G G   + +  +++I      D+ E  ++V  
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN 431

Query: 262 EIWEDRDVNTM----TLLCNSIMRILVSNGSI-------------DQAY-NLLQAMIKGE 303
           ++ +D    T+    TL+  ++ R  ++N +              ++ Y  L+    KG 
Sbjct: 432 KMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGG 491

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            +         + K  +SPN  ++  +I+   K+GK+D+ALSLF  M + GC  ++  YN
Sbjct: 492 KLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +I GL   NR  E+ +   +M E G +P   T  S+   LC+      A  +  +M  +
Sbjct: 552 AIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P     T LI  LC+ GK   A R    + + G  P I  YS  + GL    R + A
Sbjct: 612 NCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEA 667

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            +L  ++   G  P +  Y  ++   CK+ +V  A ++FN M  KG  P +  Y +LI  
Sbjct: 668 SQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICA 727

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C     ++A+     +L+K+  S D+I +T L+DGL   G  D  +     ME + C P
Sbjct: 728 LCGVSRAEEALNIFQSLLKKQWNS-DLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTP 786

Query: 604 NRITFMALITGLCKCDR 620
           +  T++ L   L K  +
Sbjct: 787 SLHTYIILARELSKVGK 803



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 230/514 (44%), Gaps = 28/514 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + + K  C  S      +I  L   G +E A  ++ ++ +EGL VPN  +YN L+  L
Sbjct: 324 LVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL-VPNTVTYNALINEL 382

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           C      +       M+ +G   +  T   +++        +KA+ VFN+++  G     
Sbjct: 383 CTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           V ++ L+V   K G ++ A   +  M + N   +E+T+C LI GF K  ++D A   F +
Sbjct: 443 VTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYE 502

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K G + +   Y  +I G CK  ++++AL L+  M+ +G +   E  + +I+  S    
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562

Query: 256 LT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
            +       K   +    NT+T    S++  L  N + + A+ +   M K   +      
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITY--TSLINGLCKNTATNLAFKIFHEMEKKNCL------ 614

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                     PN  ++  +I  L ++GK+D A      +T+ GC   +  Y+ L+ GLC 
Sbjct: 615 ----------PNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCR 660

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             R  E+ +L+  M+E G  P+     S+    C+   V  AL +   M V+G +P +  
Sbjct: 661 EGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFI 720

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +LI  LC   +A EA      ++++ +  D++ ++  + GL+     DL ++    + 
Sbjct: 721 YKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLME 780

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           +  C P +  Y I+   L K  +    + + N +
Sbjct: 781 SRNCTPSLHTYIILARELSKVGKSIGTDQIGNRL 814


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/623 (27%), Positives = 296/623 (47%), Gaps = 44/623 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A G LI      G +++A  L D++ R GL   N +  N L+   CK   +   E  +  
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWG 149
           M D+    D Y+   LL  YC  G   +A ++ ++++  G ++  V  ++ LL    + G
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG-IEPTVLTYNTLLKGLCRVG 451

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
             D A ++   M    +  +E  +  L+ G  K    + A  L+  +   GF      ++
Sbjct: 452 AFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFN 511

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWED 266
            +I GLCK  ++  A +++ +MK  G +PD      LI      S+ G+    VK   E 
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ-AFKVKGAMER 570

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTS 325
             ++    + NS++  L  +  + +  +LL  M I+G                 ++PN  
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG-----------------LTPNIV 613

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I+   K+G LD A S + EMT+ G   N+ + + ++ GL    R++E+  L+++M
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL----IKELCK 441
            + GF P H        C  +      A+  +     +  + ++  N ++    I  LCK
Sbjct: 674 VDHGFFPDH-------ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCK 726

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  +A RF + +  +GF+PD   Y   I G      VD A  L  ++   G  P++V 
Sbjct: 727 TGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+GLCK++ V  A+ LF+++  KGL P+V TYN LI+G+CK GN+D A     +M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E E  SP V+TY+ LI+GLC  G  + ++ L N+M + G     I +  L+ G  K    
Sbjct: 847 E-EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN- 904

Query: 622 RAALVHFRMMKEKGMKPDMFVFV 644
                +  M K + +K +M  F+
Sbjct: 905 -----YNEMSKPEALKQNMNCFL 922



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 181/660 (27%), Positives = 305/660 (46%), Gaps = 45/660 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           LI    S+G VE A  +   +  +G+   N  +Y  L++  CK C +D  E  L+ MQ+ 
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
                D+     L+  YC +G+ D A+ + +E++  G   +  + + L+  + K GE+ +
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  +I RM D N++ +  ++  L+ G+ ++    +A  L DKM + G       Y+ ++ 
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWED--- 266
           GLC+    + ALQ++  M   G+ PD      +L  L    + EG  TL     W+D   
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILA 500

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG-------- 318
           R      +  N+++  L   G + +A  +   M K    +  G+    +  G        
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 319 ------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        +SP+   ++ +I+ L K  +L     L  EM   G   N+  Y  LI
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           DG C    L++++    EM E+G        ++M   L R   +  A  L++KM   G  
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P   H   L  ++ ++    +    L +  +   LP+ + Y+ AI GL    +VD A   
Sbjct: 680 P--DHECFLKSDI-RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   G  PD   Y  +I G   A  V EA  L +EM+ +GL+P++ TYN LING CK
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           S N+D+A     + L ++   P+V+TY TLIDG C  G  D A  L ++M E+G +P+ +
Sbjct: 797 SENVDRAQRLFHK-LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI-----SAFLSELNPPLAFE 661
           T+ ALI GLCK      ++     M + G+   +  +  L+     ++  +E++ P A +
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALK 915



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/649 (26%), Positives = 307/649 (47%), Gaps = 34/649 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G    A+ ++ Q+ R G+ VP+ +  + ++ A CK   VD     +K+M++ G   +  T
Sbjct: 205 GETHTAHYVYQQMIRVGI-VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 263

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERM 161
              L+  Y + G  + A  V   + + G V  +V  +++L+  + K  ++D+A +++  M
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 322

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
            ++  +  +E+ + VLI G+ +  ++D A++L D+M + G  ++  + + +I G CK  +
Sbjct: 323 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLC 276
           +  A  + + M    + PD    + L+     EG       L  K + E  +   +T   
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-- 440

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM------------------IFK 317
           N++++ L   G+ D A  +   M+K G    +VG   L+                  I  
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              + +  +F+ +I+ L K GK+  A  +F +M  +GC  +   Y  LIDG C ++ + +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++++   ME     P+    NS+   L + + +V   +L+ +M ++G  P +     LI 
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALID 620

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK G   +AF    +M + G   +I+  S  + GL  + R+D A  L + +  HG  P
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D   +   +    +   + +  D  +E     L+P+   YN+ I G CK+G +D A    
Sbjct: 681 D---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           S ML  +   PD  TY TLI G   AG  D+A  L +EM  +G  PN +T+ ALI GLCK
Sbjct: 738 S-MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    A   F  + +KG+ P++  +  LI  +    N   AF++  +M
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 272/605 (44%), Gaps = 41/605 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
            F  V ++    PN  SY  L+  L +    D     L ++ D     D+  +       
Sbjct: 88  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVI------ 141

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
                +D+ + V+ E          VF ++L  + + G    A  + + M  C    + +
Sbjct: 142 -----WDELVGVYREFA----FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 192

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +   L++  VK      A  ++ +M + G   D  M  +++   CK+ +++ A     +M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 232 KGSGITPDFEILSKLITSCSDEGELTL------LVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +  G+ P+      LI      G++         + E    R+V T TLL     +    
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK---- 308

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +D+A  +L+ M +               +  + P+  ++ ++I+   + GK+D A+ 
Sbjct: 309 QCKMDEAEKVLRGMQE---------------EAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM ++G   N+F+ N+LI+G C    + E+  ++  M +   KP  ++ N++    C
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R      A NL  KM  +G EP V     L+K LC+ G   +A +    M++ G  PD V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS  + GL  ++  + A  L++DI A G     + +N +ISGLCK  ++ EAE++F++M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P   TY  LI+G+CK+ N+ QA      M E+E  SP +  Y +LI GL  + R
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM-EREXISPSIEMYNSLISGLFKSRR 592

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +   L  EM  +G  PN +T+ ALI G CK      A   +  M E G+  ++ +   
Sbjct: 593 LVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 646 LISAF 650
           ++S  
Sbjct: 653 MVSGL 657


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 272/606 (44%), Gaps = 24/606 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN +++N +++ LC    V   E+ +  +  YG   D +T T L+  +C +G  D A  +
Sbjct: 200 PNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEM 259

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+ ++  G     V +S L+      G +++A +++E M D  I      + + I     
Sbjct: 260 FDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCD 319

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R  +A++L  KM K G   +   Y  +I GL ++ + E+A+ +Y +M   G+ P    
Sbjct: 320 AGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT 379

Query: 243 LSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S LI     EG  E  L + E     D    T   N I++   S G I +A  +   M+
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K  P                SPN  +++III+   K G ++ A+ L   M   G   + +
Sbjct: 440 KAGP----------------SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTW 483

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y NLI G     +LE ++ L  EM E G  P   T N++         V  AL L  KM
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM 543

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G+ P      ++I    K  +  EA  F   MV++G LP+++ Y++ I GL    R 
Sbjct: 544 VESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRT 603

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            LA ++F ++      P++  Y+ +I GLC+  +  +AE L ++    G  P+V TY  L
Sbjct: 604 SLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTL 659

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           + G C  G   +A   +  M +K+   P    Y  L+ G C     + A+ +++ M   G
Sbjct: 660 VRGLCGKGRCYEADQLVESM-KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTG 718

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             P    + ALI  LCK +  + A   F+ M +K    D  V+  L+   L E    L+ 
Sbjct: 719 FQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSL 778

Query: 661 EVLKEM 666
           E+L  M
Sbjct: 779 ELLHVM 784



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 250/590 (42%), Gaps = 54/590 (9%)

Query: 113 NSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           N G+  + + V +EI    D G+   + FS LL+   K+       ++   M +  IR N
Sbjct: 143 NEGEVKRVIQVLSEINTTYDFGYT-LYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPN 201

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  +I     K +V +A  +   +   G   D   Y  +I G CKN  L++A +++ 
Sbjct: 202 LFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFD 261

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
            M   G  P+    S LI     EG L   +  + E  D+ +          +  L   G
Sbjct: 262 RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAG 321

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +A  LL  M K               +G   PN  ++  +I+ L +DGK ++A+ ++
Sbjct: 322 RSCEAVKLLGKMKK---------------RG-CGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   G +     Y+ LI+ L    R E +  +   M      P   T N + +  C  
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A  +  +M   G  P V    ++I    K G    A R L  M   G   D   Y
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G     +++ A  LF ++  HG  P+VV YN II+G     +V +A  LF +M+ 
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G +PS  TYN++I+G+ K+  I +A     +M+ K+   P+VITYT+ IDGLC  GR  
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV-KQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 588 DAIMLWNEMEEK-------------------------------GCAPNRITFMALITGLC 616
            A  +++EM+++                               GC PN  T+  L+ GLC
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLC 664

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R   A      MK+KG++P   ++ AL+      L    A ++   M
Sbjct: 665 GKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 203/430 (47%), Gaps = 29/430 (6%)

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID------QAY------ 293
           +I SC +EGE+  +++ + E            S   +L+  G  D        Y      
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNS 196

Query: 294 ----NLL--QAMIK----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
               NL    AMIK       + +  + M  IF     P+T ++  +I    K+G LDLA
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA 256

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             +F  M + GC  N   Y+ LI+GLC+  RLEE+ ++L EM + G +PT          
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC       A+ L+ KM+ +G  P V+  T LI  L + GK   A      M+ +G +P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V YSA I  L    R + AL +F  + +H   P+   YN+II G C    + +A  +F+
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP---DVITYTTLIDGL 580
           +M+  G  P+V TYN++I+ + K G ++ AM    R+LE   G+    D  TY  LI G 
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAM----RLLEMMKGNGLKLDTWTYANLISGF 492

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G+ + A  L+NEM E G +PN +T+ A+I G     +   AL  F  M E G  P  
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552

Query: 641 FVFVALISAF 650
             +  +IS F
Sbjct: 553 GTYNMMISGF 562



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 257/545 (47%), Gaps = 28/545 (5%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +VK  C  +      LI  L S G +EEA  + +++  +G+  P  ++Y   + +LC + 
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGI-EPTVHAYTIPIVSLCDAG 321

Query: 81  -SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
            S + V++ L +M+  G G +  T T L+      G+F+ A+ V+++++  G V   V +
Sbjct: 322 RSCEAVKL-LGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S L+      G  + A  + E M   +   N +T+ V+I GF     + KA  +FD+M K
Sbjct: 381 SALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLK 440

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +G + +   Y++II    K   +  A++L   MKG+G+  D    + LI+  S  G+L  
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEH 500

Query: 259 ---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              L  E+ E   ++   +  N+I+   ++   +D A  L   M++              
Sbjct: 501 AFSLFNEMVE-HGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES------------- 546

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G V P++ +++++I+   K  ++  A +   +M + G + NV  Y + IDGLC + R 
Sbjct: 547 --GNV-PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRT 603

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
             ++++  EM++  + P   T +S+   LC+      A  L+      G EP V   T L
Sbjct: 604 SLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTL 659

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           ++ LC  G+  EA + +  M ++G  P    Y A + G      V+ AL++F  +   G 
Sbjct: 660 VRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGF 719

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P +  Y  +I  LCKA    +A+ +F  M+ K        + +L++G  K G  D ++ 
Sbjct: 720 QPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLE 779

Query: 556 CLSRM 560
            L  M
Sbjct: 780 LLHVM 784



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 41/257 (15%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V+S    S G    +I        + EA     ++ ++GL +PN  +Y   ++ LCK+ 
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGL-LPNVITYTSFIDGLCKNG 601

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFS 139
              L      EM+   +  +  T + L+   C  GQ + A      ++D G   +   ++
Sbjct: 602 RTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYT 657

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+      G   +A +L+E M    ++ +E+ +  L+ G  K   V+ AL++FD M  +
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717

Query: 200 GFA-----------------------------------SDAAMYDVIIGGLCKNKQLEMA 224
           GF                                    SD  ++ V++ GL K  + +++
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777

Query: 225 LQLYSEMKGSGITPDFE 241
           L+L   M+    T +F+
Sbjct: 778 LELLHVMESRNCTLNFQ 794


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 261/539 (48%), Gaps = 25/539 (4%)

Query: 120 ALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A +VF E++  G +   + F +++ A     EVD AC L+  M       N   +  LIH
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH 251

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K+ RV++AL+L ++M   G   D   ++ +I GLC+  ++    +L   M   G TP
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP 311

Query: 239 D---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           +   + +L   +       E  +L+ ++    DV+  T+L N      V +G +D+A   
Sbjct: 312 NDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH-FTILING----YVKSGRLDEANAF 366

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L   +                K    P+  +F+ +I+ L K G +  A+ +  +M+  GC
Sbjct: 367 LYDKM---------------IKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGC 411

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+  Y  L+DG C  N+LEE+  +L EM   GF+      N + R LC+   V  AL+
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           ++ +M  +G +P +     LI  LCK  +  +A     DM+ +G + + V Y+  I   +
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               +  AL+L  D+   GC  D + YN +I   CK     +A  LF+EM+ K L+PS  
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           + NLLING C+ G +  A+  L  M+ +   +PDV+TY +LI+GLC  G   +A  L+N+
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHR-GLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           ++ +G  P+ IT+  LI   C+      A +      E    P+   +  L+S F+ E+
Sbjct: 651 LQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEI 709



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 231/497 (46%), Gaps = 57/497 (11%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF V++      + VD A  L   MTK G   ++ +Y  +I  L K  ++  AL+L  EM
Sbjct: 210 TFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM 269

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  PD +  + +I                           LC               
Sbjct: 270 FLMGCLPDVDTFNDVIYG-------------------------LCR-------------- 290

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
               L  + +G  + D      M+F+G  +PN  ++ +++N L + GK+D A  L  ++ 
Sbjct: 291 ----LNRIHEGAKLVD-----RMLFRG-FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE-MEESGFKPTHFTLNSMFRCLCRRQDV 410
                 N   +  LI+G   S RL+E+   L + M ++G +P  FT N++   LC++  +
Sbjct: 341 T----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+++V  M   G  P +   T L+   CK  +  EA   L +M  +GF  +I+ Y+  
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +  L    +V  AL++  ++   GC PD+  +N +I GLCK  R  +A  L+ +M+  G+
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDA 589
           I +  TYN LI+ + + G I +A+  ++ ML +  G P D ITY  LI   C  G  + A
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFR--GCPLDEITYNGLIKAFCKLGATEKA 574

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + L++EM  K   P+ I+   LI GLC+  +   AL   R M  +G+ PD+  + +LI+ 
Sbjct: 575 LGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLING 634

Query: 650 FLSELNPPLAFEVLKEM 666
                N   AF +  ++
Sbjct: 635 LCKMGNIREAFNLFNKL 651



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 203/425 (47%), Gaps = 14/425 (3%)

Query: 235 GITPDFEILSKLITSCSDEG-----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           G   +F+++ KL+    +EG      L + + + +   ++          M+ +      
Sbjct: 113 GAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPT 172

Query: 290 DQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            ++YN++  ++       V   +   M+ KG + P   +F +++  L    ++D A SL 
Sbjct: 173 FKSYNVVLDILVSANCPSVAANVFYEMLSKGVI-PTVYTFGVVMKALCMVNEVDNACSLL 231

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R+MT+ GC+ N  +Y  LI  L   +R+ E+ +LL EM   G  P   T N +   LCR 
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +     LV +M  +G  P      +L+  LC+ GK  EA   L  +      P+ V +
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHF 347

Query: 468 SAAIGGLIDIKRVDLALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +  I G +   R+D A     D +  +GC PDV  +N +I GLCK   +  A D+ N+M 
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G  P++ TY  L++G+CK   +++A   L+ M  K     +++ Y  L+  LC  G+ 
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK-GFELNIMGYNVLLRALCKNGKV 466

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             A+ +  EM +KGC P+  TF  LI GLCK DR   AL  +R M   G+  +   +  L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 647 ISAFL 651
           I AFL
Sbjct: 527 IHAFL 531



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 159/325 (48%), Gaps = 5/325 (1%)

Query: 343 ALSLFREMTQIGCMQNVF-LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
           A  +  +M  + C +  F  YN ++D L ++N    +  +  EM   G  PT +T   + 
Sbjct: 156 ATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVM 215

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           + LC   +V  A +L+R M   G  P       LI  L K  +  EA + L +M   G L
Sbjct: 216 KALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCL 275

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  ++  I GL  + R+    +L   +   G  P+ + Y ++++GLC+  +V EA+ L
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
            N++ T    P+   + +LING+ KSG +D+A   L   + K    PDV T+ TLI GLC
Sbjct: 336 LNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G    A+ + N+M   GC PN IT+  L+ G CK ++   A      M  KG + ++ 
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIM 451

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  L+ A       P A ++L EM
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEM 476



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 176/386 (45%), Gaps = 62/386 (16%)

Query: 29  SPGALGFLIRCLGSV--GLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCK----SCS 81
           +P  + F I   G V  G ++EAN  L+D++ + G C P+ +++N L+  LCK      +
Sbjct: 341 TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG-CRPDVFTFNTLIHGLCKKGLMGSA 399

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSI 140
           VD+V     +M   G   +  T T LL  +C   Q ++A  V NE+   G+ ++   +++
Sbjct: 400 VDMVN----DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNV 455

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           LL A  K G+V KA +++  M D   + +  TF  LI G  K  R + AL L+  M   G
Sbjct: 456 LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDG 515

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
             ++   Y+ +I    +   ++ AL+L ++M   G   D               E+T   
Sbjct: 516 VIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD---------------EITY-- 558

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
                           N +++     G+ ++A  L   M++ + +               
Sbjct: 559 ----------------NGLIKAFCKLGATEKALGLFDEMVRKDLV--------------- 587

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  S +++IN L + GK+  AL L R+M   G   +V  YN+LI+GLC    + E++ 
Sbjct: 588 -PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCR 406
           L  +++  G +P   T N++    CR
Sbjct: 647 LFNKLQAEGIQPDAITYNTLICWHCR 672



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 153/381 (40%), Gaps = 51/381 (13%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L   ++K+ C         LI  L   GL+  A  + + +   G C PN  +Y  LL+  
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG-CTPNLITYTTLLDGF 425

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDE 135
           CK   ++     L EM   G+  +      LL+  C +G+  KAL +  E+ D G   D 
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDI 485

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             F+ L+    K    + A  L   M    +  N  T+  LIH F++   + +AL+L + 
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   D   Y+ +I   CK    E AL L+ EM    + P          SC+    
Sbjct: 546 MLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN-------ISCN---- 594

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                             LL N + R+    G +  A  LL+ MI               
Sbjct: 595 ------------------LLINGLCRV----GKVCNALELLRDMIH-------------- 618

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +G ++P+  +++ +IN L K G +  A +LF ++   G   +   YN LI   C +   
Sbjct: 619 -RG-LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMF 676

Query: 376 EESYELLREMEESGFKPTHFT 396
           +++Y LL    E+ F P   T
Sbjct: 677 DDAYLLLLRGVENAFIPNDVT 697


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 268/604 (44%), Gaps = 84/604 (13%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +N L  A+ ++   DLV    K M+  G  +D YT+T ++  YC   +   A S
Sbjct: 67  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           V       G+  + +                                  TF  L++GF  
Sbjct: 127 VLGRAWKLGYEPDTI----------------------------------TFSTLVNGFCL 152

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + RV +A+ L D+M +     D      +I GLC   ++  AL L   M   G  PD   
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD--- 209

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                       E+T                     ++  L  +G+   A +L + M   
Sbjct: 210 ------------EVTY------------------GPVLNRLCKSGNSALALDLFRKM--- 236

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         +  +  +   + I+I++L KDG  D ALSLF EM   G   +V  Y
Sbjct: 237 -------------EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           ++LI GLCN  + ++  ++LREM      P   T +++     +   ++ A  L  +M  
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P       LI   CK     EA +    MV +G  PDIV YS  I      KRVD 
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            + LFR+I + G  P+ + YN ++ G C++ ++  A++LF EM+++G+ PSV TY +L++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C +G +++A+    +M +K   +  +  Y  +I G+C A + DDA  L+  + +KG  
Sbjct: 464 GLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+  +I GLCK      A + FR MKE G  PD F +  LI A L       + E+
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582

Query: 663 LKEM 666
           ++EM
Sbjct: 583 IEEM 586



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 218/483 (45%), Gaps = 21/483 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +++ L+   C    V      +  M +     D  T++ L+   C  G+  +AL +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + ++++G+  DE  +  +L    K G    A +L  +M++ NI+ +   + ++I    K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
               D AL LF++M   G  +D   Y  +IGGLC + + +   ++  EM G  I PD   
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317

Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI     EG+L L  KE++ +   R +   T+  NS++        + +A  +    
Sbjct: 318 FSALIDVFVKEGKL-LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD-- 374

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        LM+ KG   P+  ++ I+IN+  K  ++D  + LFRE++  G + N 
Sbjct: 375 -------------LMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L+ G C S +L  + EL +EM   G  P+  T   +   LC   ++  AL +  K
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+       +    ++I  +C   K  +A+     +  +G  PD+V Y+  IGGL     
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A  LFR +   GC PD   YNI+I        +  + +L  EM   G     +T  +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600

Query: 540 LIN 542
           +I+
Sbjct: 601 VID 603



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 17/362 (4%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           ++ A +L ++MI+  P+                P    F+ + + + +  + DL L   +
Sbjct: 51  VNDAIDLFESMIQSRPL----------------PTPIDFNRLCSAVARTKQYDLVLGFCK 94

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M   G   +++    +I+  C   +L  ++ +L    + G++P   T +++    C   
Sbjct: 95  GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A+ LV +M      P +   + LI  LC  G+  EA   +  MV+ GF PD V Y 
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             +  L       LAL+LFR +        VV Y+I+I  LCK     +A  LFNEM  K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+   V TY+ LI G C  G  D     L  M+ +    PDV+T++ LID     G+  +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLE 333

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  L+NEM  +G AP+ IT+ +LI G CK +    A   F +M  KG +PD+  +  LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 649 AF 650
           ++
Sbjct: 394 SY 395



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 214/456 (46%), Gaps = 35/456 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V EA +L D++   G   P+  +Y  +L  LCKS +  L     ++M++ 
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
                    + ++   C  G FD ALS+FNE+   G   D   +S L+      G+ D  
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +++  M   NI  +  TF  LI  FVK+ ++ +A +L+++M   G A D   Y+ +I G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDV 269
            CK   L  A Q++  M   G  PD    S LI S C     D+G    L +EI   + +
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG--MRLFREI-SSKGL 416

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFD 328
              T+  N+++     +G ++ A  L Q M+ +G P                 P+  ++ 
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-----------------PSVVTYG 459

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+++ L  +G+L+ AL +F +M +      + +YN +I G+CN++++++++ L   + + 
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G KP   T N M   LC++  +  A  L RKM+  G  P      +LI+        + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDI---KRVD 481
              + +M   GF  D    S+ I  +ID+   +R+D
Sbjct: 580 VELIEEMKVCGFSAD----SSTIKMVIDMLSDRRLD 611


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 293/622 (47%), Gaps = 26/622 (4%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           F  V+R+   + +  +YN LL  + ++ +++ +E  L+EM   G+G    T   ++  + 
Sbjct: 119 FRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFV 178

Query: 113 NSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
            S +  +A  V   +    +   +  ++ L+ A S   E D    L+ +M +    +   
Sbjct: 179 KSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVH 238

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            F  LI  F ++ RVD AL L D+M  + F +D  +Y+V I    K  +++MA + + E+
Sbjct: 239 LFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL 298

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC----NSIMRILVSNG 287
           K  G+ PD    + +I        +   V E++E+ D N  ++ C    N+++    S G
Sbjct: 299 KSQGLVPDDVTFTSMIGVLCKAERVDEAV-ELFEELDSNK-SVPCVYAYNTMIMGYGSVG 356

Query: 288 SIDQAYNLLQAMIKGEPIADV------------------GVEMLMIFKGTVSPNTSSFDI 329
             ++AY+LL+   +   I  V                   + +L   K   +PN +S++I
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNI 416

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ L K G+L+ AL +   M + G   N+   N +ID LC + RL+E+  +   ++   
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T  S+   L R   V  A  L  KM   G  P     T LI+   K G+  +  
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           +   +M+  G  PD++  +  +  +     ++    LF +I A G  PDV +Y+I+I GL
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            K     +   LF EM  +GL      YN++I+G+CKSG +++A   L  M  K    P 
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK-GLQPT 655

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+TY ++IDGL    R D+A ML+ E + K    N + + +LI G  K  R   A +   
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 630 MMKEKGMKPDMFVFVALISAFL 651
            + +KG+ P+ + +  L+ A +
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALV 737



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 165/621 (26%), Positives = 287/621 (46%), Gaps = 55/621 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M  +L +A R+     L +++  ++      A   +I   GSVG   EA  L ++ KR+G
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQVYCNSGQFDK 119
            C+P+  +YNC+L  L +   V+     L+ M+ D       Y +  L+ + C +G+ + 
Sbjct: 373 -CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNI--LIDMLCKAGELEA 429

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           AL V + + + G     +  +I++    K   +D+AC +   +D      +  TFC LI 
Sbjct: 430 ALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLID 489

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  +  +V+ A  L++KM  SG   +A +Y  +I    K  + E   ++Y EM   G +P
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D                                  +L N+ M  +   G I++   L + 
Sbjct: 550 DL---------------------------------MLLNNYMDCVFKAGEIEKGRALFEE 576

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
            IK + +               +P+  S+ I+I+ L+K G       LF EM + G   +
Sbjct: 577 -IKAQGL---------------TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLD 620

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              YN +IDG C S ++ ++Y+LL EM+  G +PT  T  S+   L +   +  A  L  
Sbjct: 621 TRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFE 680

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           + + +  +  V   + LI    K G+  EA+  L +++Q+G  P+   ++  +  L+  +
Sbjct: 681 EAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAE 740

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D AL  F+++    C P+ V Y+I+++GLCK ++  +A   + EM  +GL P+  TY 
Sbjct: 741 EIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYT 800

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +I+G  + GN+ +A     R  +   G PD   Y  +I+GL  A +  DA +L+ E   
Sbjct: 801 TMISGLARVGNVLEAKDLFER-FKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL 859

Query: 599 KGCAPNRITFMALITGLCKCD 619
           KGC     T + L+  L K D
Sbjct: 860 KGCRIYSKTCVVLLDALHKAD 880



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 290/637 (45%), Gaps = 26/637 (4%)

Query: 4   ILSRARRI-APLRVLAQDVVKSRCFMSPGAL-GFLIRCLGSVGLVEEANMLFDQVKREGL 61
           + +R  R+ A L +L  D +KS  F +   L    I C G VG V+ A   F ++K +GL
Sbjct: 246 VFAREGRVDAALSLL--DEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            VP++ ++  ++  LCK+  VD      +E+         Y    ++  Y + G+F++A 
Sbjct: 304 -VPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAY 362

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           S+       G +   + ++ +L    + G+V++A  ++E M   +   N  ++ +LI   
Sbjct: 363 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDML 421

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K   ++ AL++ D M ++G   +    +++I  LCK ++L+ A  ++  +     TPD 
Sbjct: 422 CKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDS 481

Query: 241 EILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                LI      G++    ++ E   D       ++  S++R     G  +  + + + 
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M+                +G  SP+    +  ++ + K G+++   +LF E+   G   +
Sbjct: 542 MMH---------------RG-CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD 585

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V  Y+ LI GL      +++Y+L  EM+E G        N +    C+   V  A  L+ 
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M+ +G +P V     +I  L K  +  EA+    +   +    ++V YS+ I G   + 
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+D A  +  ++   G  P+   +N ++  L KA+ + EA   F  M      P+  TY+
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +++NG CK    ++A +    M +K+   P+ ITYTT+I GL   G   +A  L+   + 
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEM-QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKS 824

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            G  P+   + A+I GL   ++   A + F   + KG
Sbjct: 825 SGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 246/535 (45%), Gaps = 25/535 (4%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  S  A   ++ CLG  G VEEA  + + +K +    PN  SYN L++ LCK+  ++  
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA--APNLTSYNILIDMLCKAGELEAA 430

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG--WVDEHVFSILLV 143
                 M++ G   +  T+  ++   C + + D+A S+F  + DH     D   F  L+ 
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGL-DHKVCTPDSVTFCSLID 489

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              + G+V+ A  L E+M D     N   +  LI  F K  R +   +++ +M   G + 
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D  + +  +  + K  ++E    L+ E+K  G+TPD    S LI      G      K  
Sbjct: 550 DLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLF 609

Query: 264 WE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTV 320
           +E  ++ ++  T   N ++     +G +++AY LL+ M  KG                 +
Sbjct: 610 YEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG-----------------L 652

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P   ++  +I+ L K  +LD A  LF E        NV +Y++LIDG     R++E+Y 
Sbjct: 653 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYL 712

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L E+ + G  P  +T N +   L + +++  AL   + M+     P     ++++  LC
Sbjct: 713 ILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLC 772

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  K  +AF F  +M ++G  P+ + Y+  I GL  +  V  A +LF    + G  PD  
Sbjct: 773 KVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA 832

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            YN +I GL  A +  +A  LF E   KG      T  +L++   K+  ++QA +
Sbjct: 833 CYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAI 887


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 233/493 (47%), Gaps = 92/493 (18%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K GF  +   Y+ ++ GLC   ++  A  LY  M  +G +PD                
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD---------------- 44

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                             +  N+++      G +D+A  +    +K              
Sbjct: 45  -----------------VVTYNTLLHGFCKVGELDEALKIFDGAVK-------------- 73

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +G V P+  +++ +IN   K  KLD A  + + M     + +V  YN+L++GLC + R+
Sbjct: 74  -RGFV-PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRR-QDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E+  L+ +    GF P   T +++   LCR  + V  AL L   +  QG+EP V    +
Sbjct: 132 DEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  L K  +  EAF   + +V+ G  PD + Y+  I GL    RV+ AL + +D+   G
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDL--------------------------------- 521
           C PDVV++N +I+GLCK +RV EAE L                                 
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308

Query: 522 --FNEMITKGLIPSVATYNLLINGWCKS---GNIDQAMLCLSRMLEKESGSPDVITYTTL 576
             F EM+ +G+ P+V TYN+L++G CK+   G I +A+     M+EK    PDV+TY+ L
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR-VPDVVTYSAL 367

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGL  AG+ DDA  L   ME KGC PN  T+ +LI+GLC  ++   AL  F  M EKG 
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGC 427

Query: 637 KPDMFVFVALISA 649
            PD   +  +ISA
Sbjct: 428 VPDTITYGTIISA 440



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 237/484 (48%), Gaps = 57/484 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN LL  LC    +   +   + M   G+  D  T   LL  +C  G+ D+AL +
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+  +  G+V + V ++ L+  F K  ++D+A  +++RM   N+  +  T+  L++G  K
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN-KQLEMALQLYSEMKGSGITPDFE 241
             RVD+A  L   +   GF+ +   Y  +I GLC+  + +  AL+L+  +   G  P+  
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI           L+K   EDR                     +++A+ L   ++K
Sbjct: 185 TYNILIDG---------LLK---EDR---------------------VNEAFELFSGLVK 211

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G+E          P+  ++ + I+ L K G+++ AL + ++M + GC+ +V  
Sbjct: 212 H------GLE----------PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 255

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N +I+GLC   R++E+  LL  ME  G  P   + N++    CR      A+   ++M 
Sbjct: 256 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315

Query: 422 VQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            +G +P V    +L+  LCK    G+  EA      M+++G +PD+V YSA I GL    
Sbjct: 316 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           ++D A  L   + A GC P+V  YN +ISGLC  ++V EA +LF  M+ KG +P   TY 
Sbjct: 376 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYG 435

Query: 539 LLIN 542
            +I+
Sbjct: 436 TIIS 439



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 147/315 (46%), Gaps = 34/315 (10%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M + GF P   T N++   LC    +  A  L  +M   G+ P V     L+   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA +     V+ GF+PD+V Y+A I G     ++D A  + + + +    PDVV YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 505 IISGLCKAQRVAEAE---------------------------------DLFNEMITKGLI 531
           +++GLCK  RV EA                                   LF  ++ +G  
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V TYN+LI+G  K   +++A    S ++ K    PD ITYT  IDGLC AGR +DA++
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +  +M+EKGC P+ ++  A+I GLCK  R   A V    M+ KG  P+   F  LI    
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 652 SELNPPLAFEVLKEM 666
                  A    KEM
Sbjct: 300 RAGKWKKAMTTFKEM 314



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 205/477 (42%), Gaps = 64/477 (13%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           S L    R++  + L + ++K+    SP  + +  L+     VG ++EA  +FD   + G
Sbjct: 18  SGLCNGGRMSDAQALYERMIKAG--YSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRG 75

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             VP+  +YN L+   CK+  +D  +  L+ M       D  T   L+   C +G+ D+A
Sbjct: 76  F-VPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSK-WGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
             +   I+D G+    + +S L+    +    V +A +L   +          T+ +LI 
Sbjct: 135 RML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILID 191

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G +K+ RV++A +LF  + K G   DA  Y V I GLCK  ++E AL +  +M   G  P
Sbjct: 192 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 251

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  ++S                                N+++  L     +D+A  LL  
Sbjct: 252 D--VVSH-------------------------------NAVINGLCKEKRVDEAEVLLSG 278

Query: 299 M-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           M  KG                  SPN  SF+ +I    + GK   A++ F+EM + G   
Sbjct: 279 MEAKG-----------------CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 358 NVFLYNNLIDGLCNS---NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            V  YN L+DGLC +    R++E+  L   M E G  P   T +++   L +   +  A 
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            L+  M  +G  P V     LI  LC   K  EA      MV++G +PD + Y   I
Sbjct: 382 RLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 268/604 (44%), Gaps = 84/604 (13%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +N L  A+ ++   DLV    K M+  G  +D YT+T ++  YC   +   A S
Sbjct: 96  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 155

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           V       G+  + +                                  TF  L++GF  
Sbjct: 156 VLGRAWKLGYEPDTI----------------------------------TFSTLVNGFCL 181

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + RV +A+ L D+M +     D      +I GLC   ++  AL L   M   G  PD   
Sbjct: 182 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD--- 238

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                       E+T                     ++  L  +G+   A +L + M   
Sbjct: 239 ------------EVTY------------------GPVLNRLCKSGNSALALDLFRKM--- 265

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         +  +  +   + I+I++L KDG  D ALSLF EM   G   +V  Y
Sbjct: 266 -------------EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 312

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           ++LI GLCN  + ++  ++LREM      P   T +++     +   ++ A  L  +M  
Sbjct: 313 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 372

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P       LI   CK     EA +    MV +G  PDIV YS  I      KRVD 
Sbjct: 373 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 432

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            + LFR+I + G  P+ + YN ++ G C++ ++  A++LF EM+++G+ PSV TY +L++
Sbjct: 433 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 492

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C +G +++A+    +M +K   +  +  Y  +I G+C A + DDA  L+  + +KG  
Sbjct: 493 GLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+  +I GLCK      A + FR MKE G  PD F +  LI A L       + E+
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 611

Query: 663 LKEM 666
           ++EM
Sbjct: 612 IEEM 615



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 218/483 (45%), Gaps = 21/483 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +++ L+   C    V      +  M +     D  T++ L+   C  G+  +AL +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + ++++G+  DE  +  +L    K G    A +L  +M++ NI+ +   + ++I    K
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 286

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
               D AL LF++M   G  +D   Y  +IGGLC + + +   ++  EM G  I PD   
Sbjct: 287 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 346

Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI     EG+L L  KE++ +   R +   T+  NS++        + +A  +    
Sbjct: 347 FSALIDVFVKEGKL-LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD-- 403

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        LM+ KG   P+  ++ I+IN+  K  ++D  + LFRE++  G + N 
Sbjct: 404 -------------LMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L+ G C S +L  + EL +EM   G  P+  T   +   LC   ++  AL +  K
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+       +    ++I  +C   K  +A+     +  +G  PD+V Y+  IGGL     
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A  LFR +   GC PD   YNI+I        +  + +L  EM   G     +T  +
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 629

Query: 540 LIN 542
           +I+
Sbjct: 630 VID 632



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 17/362 (4%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           ++ A +L ++MI+  P+                P    F+ + + + +  + DL L   +
Sbjct: 80  VNDAIDLFESMIQSRPL----------------PTPIDFNRLCSAVARTKQYDLVLGFCK 123

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M   G   +++    +I+  C   +L  ++ +L    + G++P   T +++    C   
Sbjct: 124 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 183

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A+ LV +M      P +   + LI  LC  G+  EA   +  MV+ GF PD V Y 
Sbjct: 184 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             +  L       LAL+LFR +        VV Y+I+I  LCK     +A  LFNEM  K
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+   V TY+ LI G C  G  D     L  M+ +    PDV+T++ LID     G+  +
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLE 362

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  L+NEM  +G AP+ IT+ +LI G CK +    A   F +M  KG +PD+  +  LI+
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422

Query: 649 AF 650
           ++
Sbjct: 423 SY 424



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 214/456 (46%), Gaps = 35/456 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V EA +L D++   G   P+  +Y  +L  LCKS +  L     ++M++ 
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 268

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
                    + ++   C  G FD ALS+FNE+   G   D   +S L+      G+ D  
Sbjct: 269 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 328

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +++  M   NI  +  TF  LI  FVK+ ++ +A +L+++M   G A D   Y+ +I G
Sbjct: 329 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 388

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDV 269
            CK   L  A Q++  M   G  PD    S LI S C     D+G    L +EI   + +
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG--MRLFREI-SSKGL 445

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFD 328
              T+  N+++     +G ++ A  L Q M+ +G P                 P+  ++ 
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-----------------PSVVTYG 488

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+++ L  +G+L+ AL +F +M +      + +YN +I G+CN++++++++ L   + + 
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G KP   T N M   LC++  +  A  L RKM+  G  P      +LI+        + +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDI---KRVD 481
              + +M   GF  D    S+ I  +ID+   +R+D
Sbjct: 609 VELIEEMKVCGFSAD----SSTIKMVIDMLSDRRLD 640


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 277/578 (47%), Gaps = 25/578 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   YN  L AL +   + LVEM   +M + G   D  T   L++  C + Q   A+ +
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E+ +HG   DE  F+ L+  F + G+++ A ++ ++M      L   +  VL++GF K
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + RV++AL+   ++++ GF+ D   ++ ++ G C+   +  AL +   M   G  PD   
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300

Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI+     GE    + EI +    R+ +  T+  N+++  L     I+ A +L +  
Sbjct: 301 YNSLISGMCKLGEFEKAI-EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR-- 357

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        +++ KG + P+  +F+ +I  L      D+A+ +F EM   GC  + 
Sbjct: 358 -------------ILVSKGLL-PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F Y+ LID LC   RL+E+  LL+EME SG        N++   LC+ + +  A  +  +
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 420 MRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M + G     V +NTL I  LCK+ +  EA + +  M+ EG  PD   Y++ +     + 
Sbjct: 464 MELLGVSRSSVTYNTL-IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A ++ + + ++GC PD+  Y  +I GLC+A RV  A  L   +  KG++ +   YN
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 582

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEME 597
            +I          + M     M+EK S  PD +T+  +  GLC  G P  +AI    EM 
Sbjct: 583 PVIQALFMRKRTKEGMRLFREMMEK-SDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           EKG  P   +F  L  GLC        +    M+ EK 
Sbjct: 642 EKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKA 679



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/584 (29%), Positives = 284/584 (48%), Gaps = 28/584 (4%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           ML  ++  EG+ V +  ++N L++ALCK+  +    + L+EM ++G   D+ T T L+Q 
Sbjct: 144 MLHSKMVNEGI-VLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQG 202

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           +   G  + AL +  +++ +G +  +V   +L+  F K G V++A   +  + +     +
Sbjct: 203 FIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD 262

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           + TF  L++GF +   V+ AL + D M + GF  D   Y+ +I G+CK  + E A+++  
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M     +P+    + LI++   E E+     E   D            + RILVS G +
Sbjct: 323 QMILRECSPNTVTYNTLISALCKENEI-----EAATD------------LARILVSKGLL 365

Query: 290 DQ--AYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSL 346
                +N L   +      D+ +EM    K     P+  ++ I+I++L  + +L  AL L
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            +EM   GC +N  +YN LIDGLC S R+E++ E+  +ME  G   +  T N++   LC+
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 407 RQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            + V  A  L+ +M ++G +P    +N+LL    C+ G   +A   +  M   G  PDI 
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTY-FCRVGDIEKAGDIVQTMASNGCEPDIF 544

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y   IGGL    RVD+A +L R +   G      AYN +I  L   +R  E   LF EM
Sbjct: 545 TYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604

Query: 526 ITKGLIPSVATYNLLINGWCKSGN-IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           + K   P   T+ ++  G C  G  I +A+     MLEK    P+  ++  L +GLC   
Sbjct: 605 MEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK-GILPEFPSFGFLAEGLCSLS 663

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
             D  I L N + EK     R T  ++I G  K  +   AL + 
Sbjct: 664 MEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFNDALANL 705



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 271/567 (47%), Gaps = 27/567 (4%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T LLQ+   S  FD   ++  ++   G + +   F+ L+ +F+ + E++   +++E  ++
Sbjct: 60  TLLLQL-TQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NE 116

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
              + +   + + ++  V+ +++     L  KM   G   D + ++V+I  LCK  QL  
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRP 176

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A+ +  EM   G+ PD    + L+    +EG+L   +K   + + +    LL N  +++L
Sbjct: 177 AILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALK--MKKQMLGYGCLLTNVSVKVL 234

Query: 284 VSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           V+     G +++A   +                L + +   SP+  +F+ ++N   + G 
Sbjct: 235 VNGFCKEGRVEEALRFV----------------LEVSEEGFSPDQVTFNSLVNGFCRIGN 278

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ AL +   M + G   +V+ YN+LI G+C     E++ E+L++M      P   T N+
Sbjct: 279 VNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNT 338

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+  ++  A +L R +  +G  P V     LI+ LC       A     +M  +G
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   YS  I  L   +R+  AL L +++ + GC  + V YN +I GLCK++R+ +AE
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++F++M   G+  S  TYN LI+G CK+  +++A   + +M+  E   PD  TY +L+  
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI-MEGLKPDKFTYNSLLTY 517

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C  G  + A  +   M   GC P+  T+  LI GLC+  R   A    R ++ KG+   
Sbjct: 518 FCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLT 577

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I A            + +EM
Sbjct: 578 PHAYNPVIQALFMRKRTKEGMRLFREM 604



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 6/262 (2%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           RR+    +L +++  S C  +      LI  L     +E+A  +FDQ++  G+   ++ +
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSR-SSVT 475

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L++ LCK+  V+     + +M   G   DK+T   LL  +C  G  +KA  +   + 
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
            +G   D   +  L+    + G VD A +L+  +    I L    +  +I     + R  
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMALQLYSEMKGSGITPDFE---IL 243
           + ++LF +M +     DA  + ++  GLC     ++ A+    EM   GI P+F     L
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFL 655

Query: 244 SKLITSCSDEGELTLLVKEIWE 265
           ++ + S S E  L  L+  + E
Sbjct: 656 AEGLCSLSMEDTLIELINMVME 677


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 248/540 (45%), Gaps = 53/540 (9%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           C +G+   AL V+ ++ D    D   ++ L+   SK   +  A ++++ M       +  
Sbjct: 16  CRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT 75

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  V++       RVD A +L ++M   G A++A  Y  ++ GLCK ++L+ A+ L   M
Sbjct: 76  TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETM 135

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  P     + +IT                           C +          +D+
Sbjct: 136 AERGCAPTVVTYNSIITG-------------------------FCRA--------RRVDE 162

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A+  ++ M+                +G   P+  ++  +I    K   +   L L  E+T
Sbjct: 163 AHGFMEQMVA---------------EG-CHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + G   ++  Y+ +IDGLC + RL ++ ++  EM      PT  T NS+    CR  D+ 
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMD 263

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+ L+ KM      P V   T L+   CK G+  +A+     MV     PD+V +++ +
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL    R++ ALEL  +I   GC P +  YN ++ G CKA +V +AE+L  +  ++G +
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFV 383

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAI 590
           P+  TYN+L+ G C++G  DQA+  L ++  +    P  V  Y  ++D LC  GR DDA+
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             + EM ++G  P   TF  ++  LCK  +P+ A      M + G  P      A++SA+
Sbjct: 444 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 205/443 (46%), Gaps = 54/443 (12%)

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +++V+IGGLC+  +L  AL +Y +M  +   PDF   +KL+   S    L          
Sbjct: 7   LHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRL---------- 55

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           RD                       A  +LQ M+    +                P+ ++
Sbjct: 56  RD-----------------------AVQVLQEMVSARHV----------------PDNTT 76

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
             +++ +L    ++D A  L  EM   G   N   Y+ L+DGLC   RL+E+  L+  M 
Sbjct: 77  LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMA 136

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E G  PT  T NS+    CR + V  A   + +M  +G  P +   T LI   CK     
Sbjct: 137 ERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVG 196

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
                L ++ + GF PDIV YS  I GL    R+  A+++F ++    C P  + YN +I
Sbjct: 197 RGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLI 253

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G C+A  + EA  L  +M+     P V TY  L++ +CK G +D A     +M+  +  
Sbjct: 254 GGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL- 312

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SPDV+T+T+L+DGLC  GR +DA+ L  E+  +GC P   T+  ++ G CK ++ R A  
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372

Query: 627 HFRMMKEKGMKPDMFVFVALISA 649
                + +G  P+   +  L++ 
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAG 395



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 238/531 (44%), Gaps = 24/531 (4%)

Query: 28  MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           M+PG L    +I  L   G +  A  ++ Q+       P+  +Y  L+  L K+  +   
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPDFLTYTKLVHGLSKARRLRDA 58

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L+EM       D  TLT ++Q  C   + D A  +  E++  G     + +S L+  
Sbjct: 59  VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K   +D+A  L+E M +        T+  +I GF +  RVD+A    ++M   G   D
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +IGG CK++ +   L+L  E+   G TPD    S +I      G L   V +I+
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV-DIF 237

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           E+       +  NS++      G +D+A  LL  M+  +                 +P+ 
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK----------------CAPDV 281

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +++   K G+LD A  LF++M       +V  + +L+DGLC   R+E++ ELL E
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +   G  PT +T N +    C+   V  A  LV   R +G  P      +L+   C+ G+
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 401

Query: 445 AMEAFRFLTDMVQEGF--LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
             +A ++L  +  EG      +  Y+  +  L    R D A++ + ++   G  P    +
Sbjct: 402 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
             ++  LCKA +  +A +L  EMI  G  P   T + +++ +C++G I +A
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 5/347 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++P T   +++I  L + G+L  AL ++R+M       +   Y  L+ GL  + RL ++ 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++L+EM  +   P + TL  + + LC    V  A  LV +M  +G        + L+  L
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  EA   +  M + G  P +V Y++ I G    +RVD A      + A GC PD+
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y  +I G CK++ V    +L  E+  +G  P + TY+ +I+G CK+G +  A+     
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV----D 235

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           + E+ S +P  ITY +LI G C AG  D+AI L  +M +  CAP+ +T+  L++  CK  
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A   F+ M    + PD+  F +L+     E     A E+L+E+
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 223/469 (47%), Gaps = 26/469 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+N +   ++++LC    VD     ++EM   G   +  T + L+   C   + D+A++
Sbjct: 71  VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +   + + G     V ++ ++  F +   VD+A   +E+M       +  T+  LI GF 
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   V + L+L  ++T+ GF  D   Y  +I GLCK  +L  A+ ++ EM  +     + 
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYN 250

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            L        D  E   L+ ++ +D+   DV T T L ++  ++    G +D AY L Q 
Sbjct: 251 SLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM----GRLDDAYELFQQ 306

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M+  +                +SP+  +F  +++ L  +G+++ AL L  E+T+ GC   
Sbjct: 307 MVANK----------------LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           ++ YN ++DG C +N++ ++ EL+ +    GF P   T N +    CR      AL  + 
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 410

Query: 419 KMRVQGHE--PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           ++  +G      V    +++  LC+ G+  +A +F  +M+Q G++P    ++  +  L  
Sbjct: 411 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +   A EL  ++  +G  P     + ++S  C+A  + +A++L +E+
Sbjct: 471 AHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 170/379 (44%), Gaps = 19/379 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA+   +Q+  EG C P+  +Y  L+   CKS  V      L E+   G+  D  T +
Sbjct: 160 VDEAHGFMEQMVAEG-CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            ++   C +G+   A+ +F E+          ++ L+  + + G++D+A  L+ +M D  
Sbjct: 219 TVIDGLCKAGRLRDAVDIFEEM--SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              +  T+  L+  F K  R+D A +LF +M  +  + D   +  ++ GLC   ++E AL
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 336

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRIL 283
           +L  E+   G  P     + ++       ++    + +  +  R     T+  N ++   
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGC 396

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  DQA   L              + L    G    + + + II++ L +DG+ D A
Sbjct: 397 CRAGRTDQALQYL--------------DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           +  + EM Q G +     +  ++  LC +++ ++++ELL EM + G  P   T +++   
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502

Query: 404 LCRRQDVVGALNLVRKMRV 422
            CR   +  A  L  ++R+
Sbjct: 503 YCRAGMIQKADELASELRL 521


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 275/559 (49%), Gaps = 21/559 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  +YN +L +LC    VD        ++  G   D+ T + L+       Q D AL 
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           + +E+ ++G   D   ++ LL    + G  +KA ++ E++  D     N  T+ V++ G 
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGL 274

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  +A +++ +M  +   +D   Y ++I GLC++  ++ A ++YS+M  +G+  D 
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQA 298
            + + LI    + G  T    + W+    + +  +   N + + L+ +G + +A  LL+ 
Sbjct: 335 SVYNSLIKGFCEVGR-TGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQ 393

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           +                   + SP+  +F  +I+ L ++G  + A  +  +    G   +
Sbjct: 394 LEN---------------DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           VF Y+++I+  C   R  ++ E+ + M + G KP     N++    CR   +  A+ +  
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M   G  P +     LI  LCK  K  EA     +M++ GF PDI  Y++ I GL   K
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +VD+AL ++ +I   G   DV+ +NI+I GLC A +V EA  ++ EM  K   P++ TYN
Sbjct: 559 KVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYN 618

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L++G+ + G+ID+A    + +L+     PD++TY T I GLC   R  + ++L NE+  
Sbjct: 619 TLMDGFYEIGSIDKAASLWTAILDN-GLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 599 KGCAPNRITFMALITGLCK 617
            G  P  IT+  L+  + K
Sbjct: 678 TGIMPTVITWSILVRAVIK 696



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 274/571 (47%), Gaps = 28/571 (4%)

Query: 7   RARRI----APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           RARR     A    L+      R   +      ++R L + G V+ A  LF  ++R G+ 
Sbjct: 131 RARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGV- 189

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +Y+ L+  L K   +D     L EM +YG   D      LL     +G F+KA+ 
Sbjct: 190 APDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMK 249

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           V+ +++       ++  + ++L    K G   +A E+  RM   N + +  T+ +LIHG 
Sbjct: 250 VWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGL 309

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT--P 238
            +   VD A +++  M K+G   D ++Y+ +I G C+  +   A + +     SGI    
Sbjct: 310 CRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT 369

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ- 297
            + I++K +       E T L+K++  D   +   +   +++  L  NG  ++A+ +L+ 
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429

Query: 298 AMIKGEPIADVGVEMLM--------------IFKGTVS----PNTSSFDIIINTLLKDGK 339
           A   GE +       ++              ++K  V     PN+  ++ +IN   +  K
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A+ ++ EMT  GC   +  YN LIDGLC + + +E+  L +EM E GFKP   T  S
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + R LCR + V  AL +  ++   G +  V  + +LI  LC  GK  EAF    +M ++ 
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y+  + G  +I  +D A  L+  I  +G  PD+V YN  I GLC   R  E  
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 669

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            L NE++  G++P+V T+++L+    K G I
Sbjct: 670 LLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 265/571 (46%), Gaps = 31/571 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV------FSILLVAFSKWGEVDKACELIER 160
           LL  +  + ++  A + F  +  HG     +      ++I+L +    G+VD+A  L   
Sbjct: 125 LLDAFVRARRYSDADAFFASL-SHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSS 183

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           +    +  +  T+  L+ G  K  ++D AL L D+M   G  +DA  Y+ ++ G  +   
Sbjct: 184 LRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGM 243

Query: 221 LEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLC 276
            E A++++ ++ +  G +P+      ++      G       E+W     N     T+  
Sbjct: 244 FEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKE-AGEVWSRMMANNHQADTVTY 302

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
             ++  L  +G +D A  +   M+K   + DV V                ++ +I    +
Sbjct: 303 GILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV----------------YNSLIKGFCE 346

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME-ESGFKPTHF 395
            G+   A   F + T    ++ +  YN +  GL +S  + E+ ELL+++E ++   P   
Sbjct: 347 VGRTGEAWK-FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKV 405

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  ++   LC       A  ++   R  G E  V   + +I   CK G+  +A     +M
Sbjct: 406 TFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNM 465

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V++G  P+   Y+A I G   + +++ A++++ ++ ++GCCP ++ YN +I GLCKA++ 
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKY 525

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  L  EM+ +G  P + TY  LI G C+   +D A+     +L+      DV+ +  
Sbjct: 526 QEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDA-GLQVDVMVHNI 584

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI GLC AG+ D+A  ++ EM+EK C+PN +T+  L+ G  +      A   +  + + G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +KPD+  +   I    S    P    +L E+
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV 675



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 224/536 (41%), Gaps = 62/536 (11%)

Query: 140 ILLVAFSKWGEVDKACELIERMDD---CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++L AFS+    D A      +     CN  +  ++   L+  FV+  R   A   F  +
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGV--RSHNTLLDAFVRARRYSDADAFFASL 145

Query: 197 TKSGF----ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +   F    A +   Y++I+  LC    ++ A+ L+S                       
Sbjct: 146 SHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFS----------------------- 182

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
               +L  + +  DR      +  +++M  L  +  +D A +LL  M       + GV+ 
Sbjct: 183 ----SLRRRGVAPDR------VTYSTLMSGLAKHDQLDNALDLLDEM------PNYGVQA 226

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
                     +   ++ +++   + G  + A+ ++ ++ +  G   N+  Y  ++DGLC 
Sbjct: 227 ----------DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCK 276

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             R +E+ E+   M  +  +    T   +   LCR  DV  A  +   M   G    V  
Sbjct: 277 LGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV 336

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LIK  C+ G+  EA++F       G +  I  Y+    GL+D   V  A EL + + 
Sbjct: 337 YNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLE 395

Query: 492 AHGCC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
               C PD V +  +I GLC+      A ++  +    G    V +Y+ +IN +CK G  
Sbjct: 396 NDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRT 455

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A      M+ K+   P+   Y  LI+G C   + +DAI ++ EM   GC P  IT+  
Sbjct: 456 HDANEVYKNMV-KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI GLCK ++ + A    + M E+G KPD+  + +LI     +    +A  +  E+
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 2/241 (0%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           +++VK  C  +      LI     V  + +A  ++ ++   G C P   +YN L++ LCK
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG-CCPTIITYNTLIDGLCK 521

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
           +          KEM + G+  D  T   L++  C   + D AL +++EI+D G  VD  V
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            +IL+      G+VD+A  +   M + N   N  T+  L+ GF +   +DKA  L+  + 
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL 641

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
            +G   D   Y+  I GLC   +    + L +E+  +GI P     S L+ +    G + 
Sbjct: 642 DNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701

Query: 258 L 258
           +
Sbjct: 702 I 702


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 173/604 (28%), Positives = 276/604 (45%), Gaps = 59/604 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T LL     + +  K+  V++ I   G + D H+FS ++ AF K    D A  L  +M
Sbjct: 223 TCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM 282

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           +   +  N  T+  +IHG  K  R+D+A +  +KM K   +     Y V I GL K +++
Sbjct: 283 EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI 342

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSI 279
           + A  +  EM   G  P+  + + LI      G ++  L +++    + ++  ++  NS+
Sbjct: 343 DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSL 402

Query: 280 MRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++    +  I QA N+L+ MI +G PI                 N  SF ++IN L    
Sbjct: 403 IQGFCKSDQIGQAENVLEEMIGRGLPI-----------------NQGSFSMVINWLCLKF 445

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +   AL   REM       N  L   L+ GLC + +  E+ EL   +   GF P   T N
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++   LC+  ++   L L+R M  +G     + +NTL I   CK GK  E F    +MV+
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL-ISGCCKEGKVKEGFELKEEMVK 564

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  PDI  ++  + GL +  ++D A  L+ +   +G  P+V  Y ++I G CKA +V E
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624

Query: 518 AEDLFNEMITK-----------------------------------GLIPSVATYNLLIN 542
            E+L NE+++K                                   G++ S ATY+ L++
Sbjct: 625 GENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMH 684

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C  G +D A   L  M  KE   P+V+ YTT+I G    G+ +   ++  EM      
Sbjct: 685 GLCNIGLVDDAKHLLDEM-RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN+ T+  +I G CK  + + A      M EKG+ PD   + A  +    E     AF+V
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803

Query: 663 LKEM 666
             EM
Sbjct: 804 CDEM 807



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 264/580 (45%), Gaps = 60/580 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGL--VEEANMLFDQVKREGLC 62
           L ++ R+       + +VK +  +SP  + + +   G + L  ++EAN +  ++   G  
Sbjct: 301 LCKSGRLDEAYRFKEKMVKEK--VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGF- 357

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VPN   YN L++  CK  ++        +M   G   +  TL  L+Q +C S Q  +A +
Sbjct: 358 VPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAEN 417

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  E+I  G  +++  FS+++           A   I  M   N+R N+     L+ G  
Sbjct: 418 VLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLC 477

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +  +A++L+ ++   GF  +    + +I GLCK   ++  L+L  +M   G+  D  
Sbjct: 478 KAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRI 537

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI+ C  EG+                                 + + + L + M+K
Sbjct: 538 TYNTLISGCCKEGK---------------------------------VKEGFELKEEMVK 564

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG + P+  +F+++++ L    K+D A  L+ E  + G + NV+ 
Sbjct: 565 ---------------KG-IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYT 608

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  +IDG C +N++EE   LL E+     +      NS+ R  C   ++  A  L   M+
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G        + L+  LC  G   +A   L +M +EG LP++VCY+  IGG   + +++
Sbjct: 669 SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
               + +++ +H   P+   Y I+I G CK  +  EA  L NEM  KG++P   TYN   
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFT 788

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSP--DVITYTTLIDG 579
           NG CK G +++A      M    SG+   D ITYTTLIDG
Sbjct: 789 NGLCKEGKVEEAFKVCDEM---SSGAVCLDEITYTTLIDG 825



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 280/603 (46%), Gaps = 27/603 (4%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           + K   F S     FL+  L     ++++  ++D +   G+ +P+ + ++ ++ A CK  
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGI-IPDVHLFSTMINAFCKGH 270

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
             D       +M+  G   +  T   ++   C SG+ D+A     +++        + +S
Sbjct: 271 REDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYS 330

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           + +    K  ++D+A  +++ M +     NE  +  LI G+ K   + +AL++ D M   
Sbjct: 331 VFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSK 390

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           G + ++   + +I G CK+ Q+  A  +  EM G G+               ++G  +++
Sbjct: 391 GISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLP-------------INQGSFSMV 437

Query: 260 VKEI-WEDRDVNTMTLLCNSIMRILVSNGSI--DQAYNLLQAMIKGEPIADVGVEML--M 314
           +  +  + R V  +  +   ++R L  N  +       L +A  +GE      VE+   +
Sbjct: 438 INWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE-----AVELWCRL 492

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + KG V PN  + + +I+ L K G +   L L R+M + G + +   YN LI G C   +
Sbjct: 493 LGKGFV-PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           ++E +EL  EM + G +P  +T N +   LC    +  A  L  + +  G+ P V    +
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I   CK  K  E    L ++V +    + V Y++ I        ++ A  L  D+ + G
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
                  Y+ ++ GLC    V +A+ L +EM  +GL+P+V  Y  +I G+ K G +++  
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           + L  M    +  P+  TYT +IDG C  G+  +A  L NEM EKG  P+ +T+ A   G
Sbjct: 732 IVLQEM-SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790

Query: 615 LCK 617
           LCK
Sbjct: 791 LCK 793



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 280/590 (47%), Gaps = 42/590 (7%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF ++++ G+  PN  +YN ++  LCKS        RL E   +     K  ++P
Sbjct: 273 DDAIGLFSKMEKLGV-APNVVTYNNIIHGLCKSG-------RLDEAYRFKEKMVKEKVSP 324

Query: 107 LL---QVYCNS----GQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELI 158
            L    V+ N      + D+A  V  E+ + G+V +E V++ L+  + K G + +A ++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + M    I  N  T   LI GF K  ++ +A  + ++M   G   +   + ++I  LC  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLL 275
            +   AL    EM    + P+  +L+ L++     G+    V E+W     +      + 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV-ELWCRLLGKGFVPNIVT 503

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            N+++  L   G++ +   LL+ M+          E  ++F      +  +++ +I+   
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDML----------ERGLVF------DRITYNTLISGCC 547

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+GK+     L  EM + G   +++ +N L+ GLCN+++++E+  L  E +++G+ P  +
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           T   M    C+   V    NL+ ++  +  E   V +N+L I+  C +G    AFR   D
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSL-IRAYCINGNMNAAFRLRDD 666

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G L     YS+ + GL +I  VD A  L  ++   G  P+VV Y  II G  K  +
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +   +  EM +  + P+  TY ++I+G+CK G   +A   L+ M EK    PD +TY 
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK-GILPDAVTYN 785

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              +GLC  G+ ++A  + +EM       + IT+  LI G   C +P  A
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG---CHQPSTA 832



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 247/600 (41%), Gaps = 153/600 (25%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           KT   L+   VK + + K+ +++D +   G   D  ++  +I   CK  + + A+ L+S+
Sbjct: 222 KTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSK 281

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M+  G+ P                               N +T   N+I+  L  +G +D
Sbjct: 282 MEKLGVAP-------------------------------NVVTY--NNIIHGLCKSGRLD 308

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY   + M+K +                VSP+  ++ + IN L+K  K+D A  + +EM
Sbjct: 309 EAYRFKEKMVKEK----------------VSPSLITYSVFINGLIKLEKIDEANCVLKEM 352

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +++G + N  +YN LIDG C    + E+ ++  +M   G  P   TLNS+ +  C+   +
Sbjct: 353 SELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQI 412

Query: 411 -----------------------------------VGALNLVRKMRVQGHEPWVKHNTLL 435
                                              V AL+ +R+M ++   P     T L
Sbjct: 413 GQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTL 472

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG- 494
           +  LCK GK  EA      ++ +GF+P+IV  +A I GL     +   L+L RD+   G 
Sbjct: 473 VSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL 532

Query: 495 -------------CC---------------------PDVVAYNIIISGLCKAQRVAEAED 520
                        CC                     PD+  +N+++ GLC A ++ EA  
Sbjct: 533 VFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI--------- 571
           L++E    G +P+V TY ++I+G+CK+  +++    L+ ++ K+     V+         
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652

Query: 572 -------------------------TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
                                    TY++L+ GLC  G  DDA  L +EM ++G  PN +
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  +I G  K  +     +  + M    + P+ F +  +I  F        A ++L EM
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM 772



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 249/577 (43%), Gaps = 93/577 (16%)

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKA----LQLFDKMTKSGFASDAA----------- 206
           + C  R   +++CVLIH  V    +  A    ++L D    + +A +             
Sbjct: 112 ETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMA 171

Query: 207 ----MYDVIIG------------GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
               +++ +IG               K+     A  ++S +   G+ P  +  + L++S 
Sbjct: 172 DFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSL 231

Query: 251 SDEGELTLLVKEIWEDR----------DVNTMTLLCNS---------------------- 278
               EL    K+ +E            DV+  + + N+                      
Sbjct: 232 VKANEL----KKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGV 287

Query: 279 ---------IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                    I+  L  +G +D+AY   + M+K +                VSP+  ++ +
Sbjct: 288 APNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK----------------VSPSLITYSV 331

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            IN L+K  K+D A  + +EM+++G + N  +YN LIDG C    + E+ ++  +M   G
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   TLNS+ +  C+   +  A N++ +M  +G        +++I  LC   + + A 
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
            F+ +M+     P+    +  + GL    +   A+EL+  +   G  P++V  N +I GL
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CKA  + E   L  +M+ +GL+    TYN LI+G CK G + +       M+ K+   PD
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMV-KKGIQPD 570

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           + T+  L+ GLC A + D+A  LW+E ++ G  PN  T+  +I G CK ++         
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  K ++ +  V+ +LI A+    N   AF +  +M
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +++VK            L+  L +   ++EA+ L+ + K+ G  VPN Y+Y  +++  
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGY-VPNVYTYGVMIDGY 616

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL--------------- 121
           CK+  V+  E  L E+       +      L++ YC +G  + A                
Sbjct: 617 CKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSC 676

Query: 122 ----SVFNEIIDHGWVDE--HV---------------FSILLVAFSKWGEVDKACELIER 160
               S+ + + + G VD+  H+               ++ ++  +SK G+++K   +++ 
Sbjct: 677 ATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQE 736

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M   NI  N+ T+ ++I GF K  +  +A +L ++MT+ G   DA  Y+    GLCK  +
Sbjct: 737 MSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +E A ++  EM    +  D    + LI  C      T
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTAT 833


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 175/620 (28%), Positives = 284/620 (45%), Gaps = 54/620 (8%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++  G  GL  +A  L   ++    C P   SYN +L+ L       +V     EM  
Sbjct: 151 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 210

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDK 153
            G     YT   +++  C   + D A ++  ++  HG V    V+  L+ A  K G V++
Sbjct: 211 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNE 270

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             +L+E M       +  TF   IHG  K  R+ +A +L D+M   GF  ++  Y V++ 
Sbjct: 271 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMH 330

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC+  +++ A  L +++                                      N   
Sbjct: 331 GLCRMGKVDEARMLLNKVP-------------------------------------NPNV 353

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +L N+++   VS G +D+A  ++      E +  VG            P+  +++ +I  
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMH-----ESMLSVGC----------GPDIFTYNTLILG 398

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G L  A  L  EM   GC  NV  Y  LID  C   RLEE+  +L EM   G    
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N +   LC+ + V  ALN+   M  +G +P +     LI  LCK  K  EA     
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM+ EG + + + Y+  I   +    +  AL+L  D+   GC  D + YN +I  LC+A 
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + +   LF +M++KGL P+  + N+LING C++GNI  A+  L  M+ +   +PD++TY
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR-GLTPDIVTY 637

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            +LI+GLC  GR  +A+ L+++++ +G  P+ IT+  LI+  CK      A +      +
Sbjct: 638 NSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697

Query: 634 KGMKPDMFVFVALISAFLSE 653
            G  P+   +  L+S F+ E
Sbjct: 698 SGFIPNEVTWYILVSNFIKE 717



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 242/527 (45%), Gaps = 35/527 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L  V  V+ A  L   + R G CVPN   Y  L+ AL K   V+ V   L+E
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALXKVGRVNEVLKLLEE 277

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T    +   C   +  +A  + + ++  G+  +   + +L+    + G+
Sbjct: 278 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
           VD+A  L+ ++ + N+ L    F  LI+G+V + R+D+A   + + M   G   D   Y+
Sbjct: 338 VDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCK   L  A +L +EM+  G  P+    + LI     EG L        E R+V
Sbjct: 394 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE-------EARNV 446

Query: 270 ----NTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEML--MIFKGTVSP 322
               +   L  N++             YN L+ A+ K E + D  + M   M  KG   P
Sbjct: 447 LDEMSGKGLALNAV------------GYNCLISALCKDEKVQD-ALNMFGDMSSKG-CKP 492

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +F+ +I  L K  K + AL L+++M   G + N   YN LI        ++E+ +L+
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M   G      T N + + LCR  ++   L L   M  +G  P      +LI  LC+ 
Sbjct: 553 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A  FL DM+  G  PDIV Y++ I GL    R   AL LF  +   G CPD + Y
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 672

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           N +IS  CK     +A  L +  +  G IP+  T+ +L++ + K G+
Sbjct: 673 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 231/568 (40%), Gaps = 93/568 (16%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V+ +L+      GE      L+ +M    I   E  F +++  + +     +A +L   M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 197 T-----KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
                 +  F S   + DV++ G C     ++   ++ EM   GI+P             
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCP----KVVPNVFYEMLSKGISPTVYTFG------- 221

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                                      +M+ L     +D A  LL+ M +          
Sbjct: 222 --------------------------VVMKALCLVNEVDSACALLKDMTR---------- 245

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                 G V PN   +  +I+ L K G+++  L L  EM  +GC+ +V  +N+ I GLC 
Sbjct: 246 -----HGCV-PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM----------- 420
             R+ E+ +L+  M   GF P  FT   +   LCR   V  A  L+ K+           
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTL 359

Query: 421 -------------RVQGHEPWVK---------HNTLLIKELCKHGKAMEAFRFLTDMVQE 458
                        +   HE  +          +NTL++  LCK G  + A   + +M  +
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG-LCKKGYLVSARELMNEMQIK 418

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+++ Y+  I       R++ A  +  ++   G   + V YN +IS LCK ++V +A
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++F +M +KG  P + T+N LI G CK    ++A+     ML  E    + ITY TLI 
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYNTLIH 537

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                G   +A+ L N+M  +GC  + IT+  LI  LC+       L  F  M  KG+ P
Sbjct: 538 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 597

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +      LI+      N   A E L++M
Sbjct: 598 NNISCNILINGLCRTGNIQHALEFLRDM 625



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 2/169 (1%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D++   C +       LI+ L   G +E+   LF+ +  +GL  PNN S N L+  L
Sbjct: 551 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN-PNNISCNILINGL 609

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DE 135
           C++ ++      L++M   G   D  T   L+   C +G+  +AL++F+++   G   D 
Sbjct: 610 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 669

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             ++ L+    K G  D A  L+ R  D     NE T+ +L+  F+K+ 
Sbjct: 670 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 1/172 (0%)

Query: 480 VDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           V  ++ELF+      G C     Y ++I  L  A      + L  +M  +G++   + + 
Sbjct: 91  VPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFI 150

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           L++  + ++G   QA   L  M    S  P   +Y  ++D L     P     ++ EM  
Sbjct: 151 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 210

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           KG +P   TF  ++  LC  +   +A    + M   G  P+  V+  LI A 
Sbjct: 211 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 262


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 178/656 (27%), Positives = 313/656 (47%), Gaps = 31/656 (4%)

Query: 20   DVVKSRCFM-SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
            + +K R  M S  A    +  L   G + EA  +F+ + + GL  P++ +YN L++   K
Sbjct: 469  ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS-PDSVTYNMLMKCYSK 527

Query: 79   SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
            +  +D     L EM   G   D   +  L+     +G+ D A  +F  + +       V 
Sbjct: 528  AGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVT 587

Query: 138  FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            ++ILL    K G++ KA EL   M +     N  TF  L+    K   VD AL++F +MT
Sbjct: 588  YNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMT 647

Query: 198  KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
                  D   Y+ II GL +  +++ A   + +MK   ++PD+  L  LI      G + 
Sbjct: 648  MMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVE 706

Query: 258  LLVKEIWEDRDVNTMTLLCNS-----IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
              +K + E   V+   L  NS     +M  +++   I++A +  + ++      D  V +
Sbjct: 707  DAIKVVMEF--VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764

Query: 313  LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
                             +I  L K  K   A ++F + T+ +G    +  YN L+DGL  
Sbjct: 765  ----------------PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLG 808

Query: 372  SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
            SN  E++ EL  +M+ +G  P +FT N +     + + +    +L  +MR +G EP    
Sbjct: 809  SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAIT 868

Query: 432  NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            + ++I  L K     +A     +++   F P    Y   I GL+   R + A+++F ++ 
Sbjct: 869  HNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928

Query: 492  AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             +GC P+ V YNI+I+G  K+  +  A +LF +M+ +G+ P + +Y +L+   C +G ID
Sbjct: 929  DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988

Query: 552  QAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A+     +  K +G  PD ++Y  +I+GL  + R D+A+ L++EM+ +G +P+  T+ A
Sbjct: 989  EAVQYFEEL--KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046

Query: 611  LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI  L    +   A+  +  ++  G++P +F + ALI       N   AF V K+M
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 168/672 (25%), Positives = 294/672 (43%), Gaps = 63/672 (9%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG    +++A  +F ++  EG C P+  +Y  L++ALC +  +D  +    +M+   
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEG-CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS 335

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   L+  +   G  +     +NE+   G+  + V ++IL+ A  K G+VD+A 
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           ++++ M    I  N  T+  +I G +K  R+D+AL+L + M   G    A  Y + I   
Sbjct: 396 DMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYY 455

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTM 272
            K+     A+  +  MK  GI P     +  + + ++ G ++   ++I+ D     ++  
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS-EAEDIFNDLHKCGLSPD 514

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           ++  N +M+     G ID+A  LL  MI                KG   P+    + +IN
Sbjct: 515 SVTYNMLMKCYSKAGQIDKATQLLSEMIS---------------KG-CEPDVMIINSLIN 558

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           TL K G++D A  +F  +  +     V  YN L+ GL    ++ ++ EL   M ESG  P
Sbjct: 559 TLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPP 618

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T NS+  CL +   V  AL +  +M +    P V     +I  L + G+   AF F 
Sbjct: 619 NTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFF 678

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC----------------- 495
             M ++   PD V     I G++   RV+ A+++  +     C                 
Sbjct: 679 HQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILT 737

Query: 496 -------------------CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVA 535
                              C D      +I  LCK ++  +A+++F++     G+ P++ 
Sbjct: 738 EAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLE 797

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWN 594
           +YN L++G   S   ++A+     M  K +G+ P+  TY  L+D    + R +    L++
Sbjct: 798 SYNCLMDGLLGSNFTEKALELFEDM--KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYS 855

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           EM  +GC PN IT   +I+ L K +    AL  +  +      P    +  LI   L   
Sbjct: 856 EMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAG 915

Query: 655 NPPLAFEVLKEM 666
               A ++ +EM
Sbjct: 916 RSEQAMKIFEEM 927



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 235/536 (43%), Gaps = 28/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +  +  A S  G + +A   + +M +    LN  ++  LIH  +     ++AL+++ +M
Sbjct: 168 TYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRM 226

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y  ++  L +       + L  EMK  G+ P+   + I  + +      
Sbjct: 227 ISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRI 286

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            +   + KE+ ++    DV T T+L ++    L + G +D+A  L   M           
Sbjct: 287 DDAWGIFKEMDDEGCGPDVITYTVLIDA----LCAAGKLDKAKELYVKMRAS-------- 334

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                   + SP+  ++  +++   K G L+     + EM   G   +V  Y  LI+ LC
Sbjct: 335 --------SHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALC 386

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            S  ++ ++++L  M   G  P   T N+M   L + + +  AL L+  M   G +P   
Sbjct: 387 KSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAF 446

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              L I    K G   +A      M + G +P I   +A++  L +  R+  A ++F D+
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL 506

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PD V YN+++    KA ++ +A  L +EMI+KG  P V   N LIN   K+G +
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D A     R L+    +P V+TY  L+ GL   G+   A+ L+  M E GC PN ITF +
Sbjct: 567 DAAWKMFGR-LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+  L K D    AL  F  M      PD+  +  +I   + E     AF    +M
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 155/626 (24%), Positives = 266/626 (42%), Gaps = 54/626 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M  IL   RRI  +  +   + K   + +      + + L   G +  A     ++   G
Sbjct: 137 MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVG 196

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             + N YSYN L+  L      + +++  K M   G      T + L+      G   K 
Sbjct: 197 FIL-NAYSYNGLIHLLLPGFCNEALKV-YKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254

Query: 121 LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +++  E+   G     + ++I + A  +   +D A  + + MDD     +  T+ VLI  
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                ++DKA +L+ KM  S  + D   Y  ++    K   LE   + ++EM+  G  PD
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI +                         LC S        G +D+A+++L  M
Sbjct: 375 VVTYTILIEA-------------------------LCKS--------GDVDRAFDMLDVM 401

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            KG + PN  +++ +I  LLK  +LD AL L   M  +G     
Sbjct: 402 TT---------------KG-IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F Y   ID    S    ++ +    M++ G  P+    N+    L     +  A ++   
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +   G  P      +L+K   K G+  +A + L++M+ +G  PD++  ++ I  L    R
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           VD A ++F  +      P VV YNI+++GL K  ++ +A +LF  M   G  P+  T+N 
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L++   K+  +D A+    RM      +PDV+TY T+I GL   GR D A   +++M +K
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMTMMNC-NPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KK 683

Query: 600 GCAPNRITFMALITGLCKCDRPRAAL 625
             +P+ +T   LI G+ +  R   A+
Sbjct: 684 FLSPDYVTLCTLIPGVVRHGRVEDAI 709



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 14/397 (3%)

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
           TS S+E  +T+L K I +     +   + + +   +    + D    +L+ + +   I D
Sbjct: 94  TSVSEEEVMTIL-KSISDPNSAFSYFKIVSQLTNFV---HTTDACNYMLEILREQRRIED 149

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
           +     ++ K  +  N +++  I   L   G +  A    R+MT++G + N + YN LI 
Sbjct: 150 MVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH 209

Query: 368 ----GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
               G CN     E+ ++ + M   G KP+  T +++   L RR D    +NL+ +M+  
Sbjct: 210 LLLPGFCN-----EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI 264

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +   T+ I+ L +  +  +A+    +M  EG  PD++ Y+  I  L    ++D A
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            EL+  + A    PD V Y  ++    K   +   +  +NEM   G  P V TY +LI  
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CKSG++D+A   L  M  K    P++ TY T+I GL  A R D+A+ L   ME  G  P
Sbjct: 385 LCKSGDVDRAFDMLDVMTTK-GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              +++  I    K   P  A+  F  MK++G+ P +
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSI 480


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 179/650 (27%), Positives = 304/650 (46%), Gaps = 83/650 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           LI    S+G VE A  +   +  +G+   N  +Y  L++  CK C +D  E  L+ MQ+ 
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
                D+     L+  YC +G+ D A+ + +E++  G   +  + + L+  + K GE+ +
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  +I RM D N++ +  ++  L+ G+ ++    +A  L DKM + G       Y+ ++ 
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWED--- 266
           GLC+    + ALQ++  M   G+ PD      +L  L    + EG  TL     W+D   
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILA 500

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM--------------------------- 299
           R      +  N+++  L   G + +A  +   M                           
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 300 ---IKG----EPIADVGVEMLM-----IFKGT----------------VSPNTSSFDIII 331
              +KG    EPI+   +EM       +FK                  ++PN  ++  +I
Sbjct: 561 AFKVKGAMEREPISP-SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K+G LD A S + EMT+ G   N+ + + ++ GL    R++E+  L+++M + GF 
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL----IKELCKHGKAME 447
           P H        C  +      A+  +     +  + ++  N ++    I  LCK GK  +
Sbjct: 680 PDH-------ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A RF + +  +GF+PD   Y   I G      VD A  L  ++   G  P++V YN +I+
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLCK++ V  A+ LF+++  KGL P+V TYN LI+G+CK GN+D A     +M+E E  S
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE-EGIS 851

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           P V+TY+ LI+GLC  G  + ++ L N+M + G     I +  L+ G  +
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIR 901



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/649 (26%), Positives = 307/649 (47%), Gaps = 34/649 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G    A+ ++ Q+ R G+ VP+ +  + ++ A CK   VD     +K+M++ G   +  T
Sbjct: 205 GETHTAHYVYQQMIRVGI-VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 263

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERM 161
              L+  Y + G  + A  V   + + G V  +V  +++L+  + K  ++D+A +++  M
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 322

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
            ++  +  +E+ + VLI G+ +  ++D A++L D+M + G  ++  + + +I G CK  +
Sbjct: 323 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLC 276
           +  A  + + M    + PD    + L+     EG       L  K + E  +   +T   
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-- 440

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM------------------IFK 317
           N++++ L   G+ D A  +   M+K G    +VG   L+                  I  
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              + +  +F+ +I+ L K GK+  A  +F +M  +GC  +   Y  LIDG C ++ + +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 560

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++++   ME     P+    NS+   L + + +V   +L+ +M ++G  P +     LI 
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 620

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK G   +AF    +M + G   +I+  S  + GL  + R+D A  L + +  HG  P
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D   +   +    +   + +  D  +E     L+P+   YN+ I G CK+G +D A    
Sbjct: 681 D---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           S ML  +   PD  TY TLI G   AG  D+A  L +EM  +G  PN +T+ ALI GLCK
Sbjct: 738 S-MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    A   F  + +KG+ P++  +  LI  +    N   AF++  +M
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 272/605 (44%), Gaps = 41/605 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
            F  V ++    PN  SY  L+  L +    D     L ++ D     D+  +       
Sbjct: 88  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVI------ 141

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
                +D+ + V+ E          VF ++L  + + G    A  + + M  C    + +
Sbjct: 142 -----WDELVGVYREFA----FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 192

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +   L++  VK      A  ++ +M + G   D  M  +++   CK+ +++ A     +M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252

Query: 232 KGSGITPDFEILSKLITSCSDEGELTL------LVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +  G+ P+      LI      G++         + E    R+V T TLL     +    
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK---- 308

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +D+A  +L+ M +               +  + P+  ++ ++I+   + GK+D A+ 
Sbjct: 309 QCKMDEAEKVLRGMQE---------------EAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM ++G   N+F+ N+LI+G C    + E+  ++  M +   KP  ++ N++    C
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R      A NL  KM  +G EP V     L+K LC+ G   +A +    M++ G  PD V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS  + GL  ++  + A  L++DI A G     + +N +ISGLCK  ++ EAE++F++M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P   TY  LI+G+CK+ N+ QA      M E+E  SP +  Y +LI GL  + R
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM-EREPISPSIEMYNSLISGLFKSRR 592

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +   L  EM  +G  PN +T+ ALI G CK      A   +  M E G+  ++ +   
Sbjct: 593 LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 646 LISAF 650
           ++S  
Sbjct: 653 MVSGL 657



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 26/504 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   EA  L D++ +EG+  P   +YN LL+ LC+  + D        M   G   D+  
Sbjct: 416 GHTSEAFNLCDKMLQEGI-EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 474

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + LL        F+ A +++ +I+  G+    + F+ ++    K G++ +A E+ ++M 
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D     +  T+  LI G+ K S V +A ++   M +   +    MY+ +I GL K+++L 
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 594

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
               L +EM   G+TP+      LI     EG L       +E  +  ++   ++C++++
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 281 RILVSNGSIDQAYNLLQAMIKG-------------------EPIADVGVEMLMIFKGTVS 321
             L   G ID+A  L+Q M+                     + IAD   E    F   + 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF---LL 711

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN   ++I I  L K GK+D A   F  ++  G + + F Y  LI G   +  ++E++ L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM   G  P   T N++   LC+ ++V  A  L  K+  +G  P V     LI   CK
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    AF+    M++EG  P +V YSA I GL     ++ +++L   +   G    ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 502 YNIIISGLCKAQRVAEAEDLFNEM 525
           Y  ++ G  ++  + +   L++ M
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMM 915


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/634 (25%), Positives = 301/634 (47%), Gaps = 24/634 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           L+R L   G V +A  L D+VK  G C+ P+   YN  ++   K+ +VD+      E++ 
Sbjct: 220 LVRALAREGQVADALALVDEVK--GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKA 277

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDK 153
            G   D  + T ++ V C +G+  +A  +F ++     V   + ++ +++ +   G  + 
Sbjct: 278 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFED 337

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+ER+ +     +  +F  ++    KK +VD+AL LF+ M K     +++ Y++II 
Sbjct: 338 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIID 396

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNT 271
            LC   ++E A ++  EM+ + + P+   ++ ++       +L    K  E    R  N 
Sbjct: 397 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +   S++  L   G +D+AY L + M+      D G           + N   +  +I
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKML------DAGH----------NANPVVYTSLI 500

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                 G+ +    +F+E+ + GC  ++ L N  +D +  +  +E+   +  ++   GF 
Sbjct: 501 RNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + + +   L +        N+   M+ QG     +    ++   CK GK  +A+  
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 620

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M ++   P +  Y A + GL  I R+D A  LF +  + G   +VV Y+ +I G  K
Sbjct: 621 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 680

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  +  EM+ KGL P+V T+N L++   K+  I++A++C   M E +   P+  
Sbjct: 681 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC-PPNTY 739

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY+ LI+GLC   + + A + W +M+++G  PN +T+  +I+GL K      A   F   
Sbjct: 740 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 799

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           K  G  PD   F ALI    +      A++V +E
Sbjct: 800 KANGGIPDAASFNALIEGMSNANRAMEAYQVFEE 833



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 262/554 (47%), Gaps = 26/554 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +++L+ A ++    ++A EL+ +M +    +    F  L+    ++ +V  AL L D++
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
             S    D  +Y+V I    K   ++MA + + E+K  G+ PD   +  +  ++      
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL 300

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------- 299
           GE   L  ++  +R V       N+++    S G  + AY LL+ +              
Sbjct: 301 GEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359

Query: 300 ----IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               +  +   D  + +  + K    PN+S+++III+ L   G+++ A  +  EM     
Sbjct: 360 ILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 419

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+   N ++D LC + +LEE+Y++     + G  P   T  S+   L ++  V  A  
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  KM   GH       T LI+    HG+  +  +   ++++ G  PD+   +  +  + 
Sbjct: 480 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 539

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               V+    +F DI ++G  PDV +Y+I+I GL KA +  E  ++F+ M  +G      
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            YN +++G+CKSG + +A   L  M EK    P V TY  ++DGL    R D+A ML+ E
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEK-CVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS--E 653
            + KG   N + + +LI G  K  R   A +    M +KG+ P+++ + +L+ A +   E
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718

Query: 654 LNPPLA-FEVLKEM 666
           +N  L  F+ +KEM
Sbjct: 719 INEALVCFQSMKEM 732



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 289/605 (47%), Gaps = 25/605 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I C G  G V+ A   F ++K +GL  P++ SY  ++  LCK+  +   E    +M+   
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGL-KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
                Y    ++  Y ++G+F+ A  +   + + G +   V F+ +L    K  +VD+A 
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L E M   +   N  T+ ++I       RV++A ++ D+M  +    +    ++++  L
Sbjct: 375 SLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 433

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMT 273
           CK ++LE A +++      G  PD      LI     +G++    +  E   D   N   
Sbjct: 434 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 493

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIFKG 318
           ++  S++R    +G  +  + + + +I+     D+ +               +  MIF+ 
Sbjct: 494 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 553

Query: 319 TVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             S    P+  S+ I+I+ L K G+     ++F  M Q G   +   YN ++DG C S +
Sbjct: 554 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 613

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           + ++YE+L EM+E   +PT  T  ++   L +   +  A  L  + + +G E  V   + 
Sbjct: 614 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 673

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI    K G+  EA+  L +M+++G  P++  +++ +  L+  + ++ AL  F+ +    
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 733

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+   Y+I+I+GLC+ Q+  +A   + +M  +GL+P+V TY  +I+G  K GNI  A 
Sbjct: 734 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 793

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               R  +   G PD  ++  LI+G+  A R  +A  ++ E   +GC  N  + ++L+  
Sbjct: 794 SLFER-FKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDA 852

Query: 615 LCKCD 619
           L K +
Sbjct: 853 LNKSE 857



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 285/610 (46%), Gaps = 26/610 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +Y  L+ AL ++   +     L++MQ+ G+    +  T L++     GQ   AL++
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+       + V +++ +  F K G VD A +    +    ++ ++ ++  +I    K
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+ +A +LF +M        A  Y+ +I G     + E A +L   ++  G  P    
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356

Query: 243 LSKLITSCSDE---GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + ++T    +    E   L + + +D + N+ T   N I+ +L   G +++AY +L  M
Sbjct: 357 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY--NIIIDMLCLGGRVEEAYRILDEM 414

Query: 300 IKGEPIADVGV---------------EMLMIFKGTV----SPNTSSFDIIINTLLKDGKL 340
                  ++                 E   IF+       +P+  ++  +I+ L K G++
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  LF +M   G   N  +Y +LI       R E+ +++ +E+   G KP    LN+ 
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 534

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             C+ +  +V     +   +R  G  P V+  ++LI  L K G+A E       M Q+GF
Sbjct: 535 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 594

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             D   Y+A + G     +V  A E+  ++      P V  Y  I+ GL K  R+ EA  
Sbjct: 595 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 654

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF E  +KG+  +V  Y+ LI+G+ K G ID+A L L  M+ K+  +P+V T+ +L+D L
Sbjct: 655 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM-KKGLTPNVYTWNSLLDAL 713

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             A   ++A++ +  M+E  C PN  T+  LI GLC+  +   A V ++ M+++G+ P++
Sbjct: 714 VKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 773

Query: 641 FVFVALISAF 650
             +  +IS  
Sbjct: 774 VTYTTMISGL 783



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 246/533 (46%), Gaps = 21/533 (3%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  S  +   ++ CLG    V+EA  LF+ +K++    PN+ +YN +++ LC    V+  
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEA 407

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L EM+      +  T+  ++   C + + ++A  +F      G   + V +  L+  
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G+VD+A  L E+M D     N   +  LI  F    R +   ++F ++ + G   D
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
             + +  +  + K  ++E    ++ +++  G  PD    S LI   +  G+   T  +  
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             + +         N+++     +G + +AY +L+ M +                  V P
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK----------------CVQP 631

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
             +++  I++ L K  +LD A  LF E    G   NV LY++LIDG     R++E+Y +L
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM + G  P  +T NS+   L + +++  AL   + M+     P     ++LI  LC+ 
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  +AF F  DM ++G +P++V Y+  I GL  +  +  A  LF    A+G  PD  ++
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           N +I G+  A R  EA  +F E   +G   ++ +   L++   KS  ++QA +
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAI 864



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 231/514 (44%), Gaps = 22/514 (4%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +++E M      L  +    L    V+  R+D A+     M +  F    + Y V+IG L
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL 189

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTM 272
            + ++ E AL+L  +M+  G      + + L+ + + EG++     LV E+ +   +   
Sbjct: 190 AEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV-KGSCLEPD 248

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +L N  +      G++D A+     + K +                + P+  S+  +I 
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHEL-KAQ---------------GLKPDDVSYTSMIW 292

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G+L  A  LF +M     +   + YN +I G  ++ R E++Y+LL  + E G  P
Sbjct: 293 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
           +  + NS+  CL +++ V  AL+L   M+ +  EP      ++I  LC  G+  EA+R L
Sbjct: 353 SVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 411

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M      P+++  +  +  L   ++++ A ++F      GC PD V Y  +I GL K 
Sbjct: 412 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 471

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            +V EA  LF +M+  G   +   Y  LI  +   G  +        ++ +    PD+  
Sbjct: 472 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI-RRGCKPDLTL 530

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
             T +D +  AG  +   M++ ++   G  P+  ++  LI GL K  + R     F  MK
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++G   D   + A++  F        A+E+L+EM
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 170/637 (26%), Positives = 305/637 (47%), Gaps = 34/637 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           ++P +  +  LI C   +G ++     F  + + G  V +   ++ LL+ LC +  VD  
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH----VFSI 140
            ++ L+ M ++G   D ++ + LL+ +CN  + ++AL + + + D G          ++ 
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++    K   VD+A  + + M D  +R N  T+  LIHG++   +  + +Q+  +M+  G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              D  +Y V++  LCKN +   A  ++  +   GI P+  I   L+   + EG L+ + 
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEM- 326

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNG-SIDQA-YNLLQAMIKGEPIADVGVEMLMIF-- 316
                           +S + ++V NG S D   +N++      + + D   E + IF  
Sbjct: 327 ----------------HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID---EAMHIFDK 367

Query: 317 --KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             +  +SPN  ++  +I+ L K G++D A+  F +M   G   ++F++++L+ GLC  ++
Sbjct: 368 MRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E++ EL  E+ + G +      N++   LCR   V+ A  L+  M   G  P V     
Sbjct: 428 WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNT 487

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+   C  G+  EA + L  +V  G  PD V Y+  + G    +R+D A  LFR++   G
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVV YN I+ GL +  R +EA++L+  MI      ++ TYN++ING CK+  +D+A 
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAF 607

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                +  K+    D+ T   +I  L   GR +DA+ L+  +   G  P+  T+  +   
Sbjct: 608 KMFHSLCSKDL-QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAEN 666

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L K          F  M+E G  P+  +  AL+   L
Sbjct: 667 LIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 242/530 (45%), Gaps = 36/530 (6%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F  +  +G+  PNN++Y CL+           V   L+EM  +G   D Y  
Sbjct: 217 MVDRAKGVFQHMIDKGV-RPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIY 275

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C +G+  +A ++F+ +I  G   +  ++ ILL  ++  G + +    ++ M  
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG 335

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  +   F ++   + KK+ +D+A+ +FDKM +   + +   Y  +I  LCK  +++ 
Sbjct: 336 NGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDD 395

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMT 273
           A+  +++M   G+TPD  + S L+          L   + WE          D+ +   T
Sbjct: 396 AVLKFNQMIDEGMTPDIFVFSSLVYG--------LCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N++M  L   G + +A  L+  M++      VGV           P+  S++ +++ 
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLR------VGVR----------PDVISYNTLVDG 491

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               G++D A  L   +  IG   +   YN L+ G C + R++++Y L REM   G  P 
Sbjct: 492 HCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPD 551

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++   L +      A  L   M     +  +    ++I  LCK+    EAF+   
Sbjct: 552 VVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH 611

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +  +    DI   +  IG L+   R + A++LF  I A+G  PDV  Y +I   L K  
Sbjct: 612 SLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            + E ++LF+ M   G  P+    N L+      G+I++A   LS++ EK
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEK 721



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 138/568 (24%), Positives = 236/568 (41%), Gaps = 58/568 (10%)

Query: 109 QVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI----ERM-D 162
           + +  S   + AL +F+E++ H        F+ LL A S+      A EL+     RM  
Sbjct: 24  RAHSGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIR 82

Query: 163 DCNIRL--NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF-ASDAAMYDVIIGGLCKNK 219
           +C+I++  +  T+ +LI  F +  R+      F  + K+G+  +D  ++  ++ GLC  K
Sbjct: 83  ECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAK 142

Query: 220 QLEMALQ-LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
           +++ A   L   M   G TPD    S L+                            CN 
Sbjct: 143 RVDEATDILLRRMPEFGCTPDVFSYSILLKG-------------------------FCNE 177

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                      ++A  LL  M      AD G        G+ +PN  ++  +I+ L K  
Sbjct: 178 --------KRAEEALELLSMM------ADDG-------DGSHTPNVVTYTTVIDGLCKAQ 216

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +D A  +F+ M   G   N   Y  LI G  +  + +E  ++L+EM   G +P  +   
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYA 276

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +   LC+      A N+   +  +G +P V    +L+      G   E   FL  MV  
Sbjct: 277 VLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN 336

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PD   ++           +D A+ +F  +      P++V Y  +I  LCK  RV +A
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDA 396

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              FN+MI +G+ P +  ++ L+ G C     ++A      +L+ +    D + + TL+ 
Sbjct: 397 VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLD-QGIRLDTVFFNTLMC 455

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC  GR  +A  L + M   G  P+ I++  L+ G C   R   A     ++   G+KP
Sbjct: 456 NLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKP 515

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   +  L+  +        A+ + +EM
Sbjct: 516 DKVTYNTLLHGYCKARRIDDAYSLFREM 543



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 61/390 (15%)

Query: 28  MSPG--ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP     G LI  L  +G V++A + F+Q+  EG+  P+ + ++ L+  L   C+VD  
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM-TPDIFVFSSLVYGL---CTVD-- 426

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
                                         +++KA  +F E++D G  +D   F+ L+  
Sbjct: 427 ------------------------------KWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             + G V +A  LI+ M    +R +  ++  L+ G     R+D+A +L D +   G   D
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLV 260
              Y+ ++ G CK ++++ A  L+ EM   G+TPD    + ++      G  +    L +
Sbjct: 517 KVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             I     +N  T   N I+  L  N  +D+A+ +  ++   +   D       IF    
Sbjct: 577 SMINSRTQMNIYTY--NIIINGLCKNNFVDEAFKMFHSLCSKDLQLD-------IFTA-- 625

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
                  +I+I  LLK G+ + A+ LF  ++  G + +V  Y  + + L     LEE  E
Sbjct: 626 -------NIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE 678

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           L   MEE+G  P    LN++ R L  R D+
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDI 708



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 38/259 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G ++EA  L D +   GL  P+  +YN LL   CK+  +D      +EM   G   D  
Sbjct: 495 TGRIDEAAKLLDVIVSIGL-KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVV 553

Query: 103 TLTPLLQVYCNSGQFDKA---------------LSVFNEIID----HGWVDE-------- 135
           T   +L     +G+F +A               +  +N II+    + +VDE        
Sbjct: 554 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613

Query: 136 -------HVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
                   +F+  I++ A  K G  + A +L   +    +  + +T+C++    +K+  +
Sbjct: 614 CSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSL 673

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           ++  +LF  M ++G A ++ M + ++  L     +  A    S++     + +    S L
Sbjct: 674 EELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSML 733

Query: 247 ITSCSDEGELTLLVKEIWE 265
           I S    GE   L K + E
Sbjct: 734 I-SIYSRGEYQQLAKSLPE 751


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 258/551 (46%), Gaps = 52/551 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV-DKACELIERMDDCNIRLNEKTFCV 175
           D AL+ FN ++        + F+ LL A  K     D    L ++M+   +  +  T  +
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F +  RVD    +  K+ K G       ++ +I GLCK  +   A++L+ +M   G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                             V+T T + N + +I             
Sbjct: 223 YQPD-----------------------------VHTYTTIINGLCKI------------- 240

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                 GE +A  G+   M   G   P+  ++  II++L KD +++ AL +F  M   G 
Sbjct: 241 ------GETVAAAGLFRKMGEAG-CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI 293

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+F YN+LI GLCN +R  E+  +L EM      P   T + +    C+  +V  A  
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARG 353

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +++ M   G EP V   + L+       + +EA +    M+ +G  PD+  Y+  I G  
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             KR+  A +LF ++   G  PD+V+YN +I GLC+  R+ EA DLF  M+T G +P + 
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 473

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L++G+CK G + +A   L R ++     P+++ Y  LID +C +    +A  L++E
Sbjct: 474 TYSILLDGFCKQGYLAKAFR-LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  +G  PN   +  +I GLCK      AL  FR M+E G  P+ F +  +I  FL   +
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592

Query: 656 PPLAFEVLKEM 666
              A +++ EM
Sbjct: 593 ESRAVQLIGEM 603



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 231/487 (47%), Gaps = 18/487 (3%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L  Q++  GL  P+ Y+ + L+    +   VDL    L ++   G      T   L+   
Sbjct: 144 LSKQMELAGLS-PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGL 202

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+F +A+ +F++++  G+  D H ++ ++    K GE   A  L  +M +   + + 
Sbjct: 203 CKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDV 262

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  +I    K  RV++AL +F  M   G + +   Y+ +I GLC   +   A  + +E
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSI 289
           M    I P+    S LI     EG        ++E R V  TMT +   +   +V+  S+
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGN-------VFEARGVLKTMTEM--GVEPNVVTYSSL 373

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
              Y+L   +++   + DV     MI KG   P+  S++I+IN   K  ++  A  LF E
Sbjct: 374 MNGYSLQAEVVEARKLFDV-----MITKG-CKPDVFSYNILINGYCKAKRIGEAKQLFNE 427

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   ++  YN LIDGLC   RL E+++L + M  +G  P   T + +    C++  
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L R M+    +P +    +LI  +CK     EA +  +++  +G  P++  Y+ 
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL     +D ALE FR++   GC P+  +YN+II G  + +  + A  L  EM  KG
Sbjct: 548 IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607

Query: 530 LIPSVAT 536
            +  VAT
Sbjct: 608 FVADVAT 614



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 235/503 (46%), Gaps = 28/503 (5%)

Query: 69  YNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +N LL A+ K     D V    K+M+  G   D YTL  L+  +    + D   SV  +I
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           I  G     V F+ L+    K G+  +A EL + M     + +  T+  +I+G  K    
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A  LF KM ++G   D   Y  II  LCK++++  AL ++S MK  GI+P+    + L
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 247 IT---SCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           I    + S   E + ++ E+       ++ T +LL N    I    G++ +A  +L+ M 
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN----IFCKEGNVFEARGVLKTM- 358

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 ++GVE          PN  ++  ++N      ++  A  LF  M   GC  +VF
Sbjct: 359 -----TEMGVE----------PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVF 403

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI+G C + R+ E+ +L  EM   G  P   + N++   LC+   +  A +L + M
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G+ P +   ++L+   CK G   +AFR    M      P++V Y+  I  +   + +
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A +LF ++   G  P+V  Y  II+GLCK   + EA + F  M   G  P+  +YN++
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVI 583

Query: 541 INGWCKSGNIDQAMLCLSRMLEK 563
           I G+ +  +  +A+  +  M EK
Sbjct: 584 IRGFLQHKDESRAVQLIGEMREK 606



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%)

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           + + +A   FN M+ +   P +  +N L++   K  +   A++ LS+ +E    SPD  T
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
              LI+      R D    +  ++ + G     +TF  LI GLCK  +   A+  F  M 
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 633 EKGMKPDMFVFVALISA 649
            +G +PD+  +  +I+ 
Sbjct: 220 ARGYQPDVHTYTTIING 236


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 181/631 (28%), Positives = 292/631 (46%), Gaps = 31/631 (4%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FL     S  L  E N LF  ++R+    P+   YN  L  L K+  + LVE    +M  
Sbjct: 133 FLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVA 192

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
                D  T   L++  C + Q   A+ +  ++ ++G   DE  F+ L+  F +  +V+ 
Sbjct: 193 DAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEG 252

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  + E M +    L   +  VL++G  K+ R+++AL+      + GF  D   ++ ++ 
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVN 310

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNT 271
           GLC+   ++  L++   M   G   D    + LI+     GE+   V+ +     RD   
Sbjct: 311 GLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEP 370

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV------------------GVEML 313
            T+  N+++  L     ++ A  L + +     + DV                   +E+ 
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELF 430

Query: 314 --MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
             M  KG   P+  ++ I+I +L  + +L  AL L +EM   GC +NV +YN LIDGLC 
Sbjct: 431 EEMKEKG-CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +NR+ ++ ++  +ME  G   +  T N++   LC+ + V  A  L+ +M ++G +P    
Sbjct: 490 NNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T ++K  C+ G    A   + +M   G  PDIV Y   IGGL    RVD+A +L R + 
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN-I 550
             G      AYN +I  LCK +R  EA  LF EM+ KG  P V TY ++  G C  G  I
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A+     MLEK    P+  ++  L +GLC     D  I L N + EKG      T  +
Sbjct: 670 QEAVDFTVEMLEK-GILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET--S 726

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           +I G  K  +   AL +   + ++  KP  F
Sbjct: 727 IIRGFLKIQKFNDALANLGAILDRK-KPRRF 756



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 260/567 (45%), Gaps = 28/567 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK----WGEVDKACELIERM 161
           LL+    +G FD  L++  ++      VDE  F I L  ++       E++    L+ER 
Sbjct: 98  LLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMER- 156

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D  ++ + + + V +   VK +++     L  KM       D + ++++I  LCK  QL
Sbjct: 157 -DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSI 279
             A+ +  +M   G+ PD +  + L+    +E ++   L +KE+  +      ++  N +
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L   G I++A   +                    +    P+  +F+ ++N L + G 
Sbjct: 276 VNGLCKEGRIEEALRFIYE------------------EEGFCPDQVTFNALVNGLCRTGH 317

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +   L +   M + G   +V+ YN+LI GLC    ++E+ E+L  M     +P   T N+
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+   V  A  L R +  +G  P V     LI+ LC       A     +M ++G
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   YS  I  L   +R+  AL L +++   GC  +VV YN +I GLCK  RV +AE
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           D+F++M   G+  S  TYN LING CKS  +++A   + +M+  E   PD  TYTT++  
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI-MEGLKPDKFTYTTMLKY 556

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C  G    A  +   M   GC P+ +T+  LI GLCK  R   A    R ++ KGM   
Sbjct: 557 FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLT 616

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I A         A  + +EM
Sbjct: 617 PQAYNPVIQALCKRKRTKEAMRLFREM 643



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 167/357 (46%), Gaps = 13/357 (3%)

Query: 318 GTVSPNTSSFDIIINTLLKD----GKLDLALSLFREM--TQIGCMQNVFLYNNLIDGLCN 371
            +  PN S+   + + LL+     G  D  L+L R+M  ++I   ++ FL    ++    
Sbjct: 82  ASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLI--FLETYAT 139

Query: 372 SNRLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           S+ L      L  + E  F  KP     N     L +   +     L  KM      P V
Sbjct: 140 SHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDV 199

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
               +LI+ LCK  +   A   L DM   G  PD   ++  + G I+   V+ AL +   
Sbjct: 200 STFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKEL 259

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   GC    V+ N++++GLCK  R+ EA     E   +G  P   T+N L+NG C++G+
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGH 317

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           I Q +  +  MLEK     DV TY +LI GLC  G  D+A+ + + M  + C PN +T+ 
Sbjct: 318 IKQGLEMMDFMLEK-GFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYN 376

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI  LCK +   AA    R++  KG+ PD+  F +LI       N  +A E+ +EM
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 6/262 (2%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           RR+    +L +++  S C  +      LI  L     V +A  +FDQ++  G+   ++ +
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSR-SSVT 514

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L+  LCKS  V+     + +M   G   DK+T T +L+ +C  G   +A  +   + 
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574

Query: 129 DHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
            +G   + V +  L+    K G VD A +L+  +    + L  + +  +I    K+ R  
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTK 634

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMALQLYSEMKGSGITPDFE---IL 243
           +A++LF +M + G   D   Y ++  GLC     ++ A+    EM   GI P+F     L
Sbjct: 635 EAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFL 694

Query: 244 SKLITSCSDEGELTLLVKEIWE 265
           ++ + S S E  L  L+  + E
Sbjct: 695 AEGLCSLSMEDTLIQLINMVME 716


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 256/555 (46%), Gaps = 51/555 (9%)

Query: 113 NSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D ALS FN ++  H       F+ LL++ +K         L  +MD   I  N  
Sbjct: 45  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 104

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  +LI+ F    R+  A  +  K+ K G   + A ++ +I GLC   ++   L L+ +M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G G  P+                             V T   L N + ++    GS   
Sbjct: 165 IGEGFQPN-----------------------------VVTYGTLINGLCKV----GSTSA 191

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL++M +G    DV V                +  II++L KD ++  A +LF EM 
Sbjct: 192 AIRLLRSMEQGNCQPDVVV----------------YTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   ++F YN+LI  LCN    +    LL EM  S   P     +++   LC+   V+
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++V  M  +G EP V     L+   C   +  EA +    MV +GF PD+V YS  I
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   I+R++ A+ LF ++C     P+ V Y+ ++ GLC   R+ +A  LF+EM+T+G I
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   +Y +L++  CK+  +D+A + L + +E  +  PD+  YT +IDG+C AG  + A  
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEA-IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L++ +  KG  PN  T+  +I GLC+      A   F  MK KG  P+   +  +   FL
Sbjct: 475 LFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 534

Query: 652 SELNPPLAFEVLKEM 666
                    ++L+EM
Sbjct: 535 RNNETLRGIQLLQEM 549



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 22/521 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 124 FNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G       F+ L+      G++ +   L ++M     + N  T+  LI+G  K
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     D  +Y  II  LCK++Q+  A  L+SEM   GI+P    
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI +  +  E   +T L+ E+   + +  + +  ++++  L   G + +A++++  M
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF-STVVDALCKEGKVMEAHDVVDMM 304

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK       GVE          PN  +++ +++      ++D A+ +F  M   G   +V
Sbjct: 305 IKR------GVE----------PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ LI+G C   R+E++  L  EM      P   T +++   LC    +  A+ L  +
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P      +L+  LCK+ +  EA   L  +      PDI  Y+  I G+     
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A +LF ++ + G  P+V  Y I+I+GLC+   +AEA  LF EM  KG  P+  TYNL
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +  G+ ++    + +  L  ML +   S DV T T L++ L
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLAR-GFSADVSTSTVLVEML 568



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           +SS +   +  L    LD ALS F  M  +    ++  +  L+  +           L  
Sbjct: 33  SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 92

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M+  G  P  +TLN +    C  Q +  A +++ K+   GH+P +     LI+ LC  G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  E       M+ EGF P++V Y   I GL  +     A+ L R +    C PDVV Y 
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            II  LCK ++V +A +LF+EMI +G+ PS+ TYN LI+  C           L+ M+  
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   P+V+ ++T++D LC  G+  +A  + + M ++G  PN +T+ AL+ G C       
Sbjct: 273 KI-MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 331

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+  F  M  KG  PD+  +  LI+ +
Sbjct: 332 AVKVFDTMVCKGFAPDVVSYSTLINGY 358



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 198/428 (46%), Gaps = 22/428 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        EM 
Sbjct: 177 GTLINGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 235

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
             G     +T   L+   CN  ++    ++ NE+++   +   V FS ++ A  K G+V 
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++++ M    +  N  T+  L+ G   +S +D+A+++FD M   GFA D   Y  +I
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDV 269
            G CK +++E A+ L+ EM    + P+    S L+      G L     L  E+     +
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                 C  ++  L  N  +D+A  LL+A I+G                 + P+   + I
Sbjct: 416 PDFVSYC-ILLDYLCKNRRLDEAIALLKA-IEGS---------------NMDPDIQIYTI 458

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ + + G+L+ A  LF  ++  G   NV+ Y  +I+GLC    L E+ +L  EM+  G
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           + P   T N + R   R  + +  + L+++M  +G    V  +T+L++ L   G      
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 578

Query: 450 RFLTDMVQ 457
           + L++ +Q
Sbjct: 579 QILSEFLQ 586


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 256/555 (46%), Gaps = 51/555 (9%)

Query: 113 NSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D ALS FN ++  H       F+ LL++ +K         L  +MD   I  N  
Sbjct: 36  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 95

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  +LI+ F    R+  A  +  K+ K G   + A ++ +I GLC   ++   L L+ +M
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G G  P+                             V T   L N + ++    GS   
Sbjct: 156 IGEGFQPN-----------------------------VVTYGTLINGLCKV----GSTSA 182

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL++M +G    DV V                +  II++L KD ++  A +LF EM 
Sbjct: 183 AIRLLRSMEQGNCQPDVVV----------------YTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   ++F YN+LI  LCN    +    LL EM  S   P     +++   LC+   V+
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++V  M  +G EP V     L+   C   +  EA +    MV +GF PD+V YS  I
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   I+R++ A+ LF ++C     P+ V Y+ ++ GLC   R+ +A  LF+EM+T+G I
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   +Y +L++  CK+  +D+A + L + +E  +  PD+  YT +IDG+C AG  + A  
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEA-IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 465

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L++ +  KG  PN  T+  +I GLC+      A   F  MK KG  P+   +  +   FL
Sbjct: 466 LFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 525

Query: 652 SELNPPLAFEVLKEM 666
                    ++L+EM
Sbjct: 526 RNNETLRGIQLLQEM 540



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 22/521 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 124 FNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G       F+ L+      G++ +   L ++M     + N  T+  LI+G  K
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     D  +Y  II  LCK++Q+  A  L+SEM   GI+P    
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI +  +  E   +T L+ E+   + +  + +  ++++  L   G + +A++++  M
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF-STVVDALCKEGKVMEAHDVVDMM 295

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK       GVE          PN  +++ +++      ++D A+ +F  M   G   +V
Sbjct: 296 IKR------GVE----------PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ LI+G C   R+E++  L  EM      P   T +++   LC    +  A+ L  +
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P      +L+  LCK+ +  EA   L  +      PDI  Y+  I G+     
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A +LF ++ + G  P+V  Y I+I+GLC+   +AEA  LF EM  KG  P+  TYNL
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +  G+ ++    + +  L  ML +   S DV T T L++ L
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLAR-GFSADVSTSTVLVEML 559



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           +SS +   +  L    LD ALS F  M  +    ++  +  L+  +           L  
Sbjct: 24  SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 83

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M+  G  P  +TLN +    C  Q +  A +++ K+   GH+P +     LI+ LC  G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  E       M+ EGF P++V Y   I GL  +     A+ L R +    C PDVV Y 
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            II  LCK ++V +A +LF+EMI +G+ PS+ TYN LI+  C           L+ M+  
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   P+V+ ++T++D LC  G+  +A  + + M ++G  PN +T+ AL+ G C       
Sbjct: 264 KI-MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 322

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+  F  M  KG  PD+  +  LI+ +
Sbjct: 323 AVKVFDTMVCKGFAPDVVSYSTLINGY 349



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 198/428 (46%), Gaps = 22/428 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        EM 
Sbjct: 168 GTLINGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI 226

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
             G     +T   L+   CN  ++    ++ NE+++   +   V FS ++ A  K G+V 
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++++ M    +  N  T+  L+ G   +S +D+A+++FD M   GFA D   Y  +I
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDV 269
            G CK +++E A+ L+ EM    + P+    S L+      G L     L  E+     +
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                 C  ++  L  N  +D+A  LL+A I+G                 + P+   + I
Sbjct: 407 PDFVSYC-ILLDYLCKNRRLDEAIALLKA-IEGS---------------NMDPDIQIYTI 449

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ + + G+L+ A  LF  ++  G   NV+ Y  +I+GLC    L E+ +L  EM+  G
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           + P   T N + R   R  + +  + L+++M  +G    V  +T+L++ L   G      
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 569

Query: 450 RFLTDMVQ 457
           + L++ +Q
Sbjct: 570 QILSEFLQ 577


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 161/556 (28%), Positives = 257/556 (46%), Gaps = 53/556 (9%)

Query: 113 NSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           N    D+ALS FN ++ H      V  F+ +L + +          L ++MD   I  + 
Sbjct: 51  NFNTIDEALSSFNRML-HMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDV 109

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T  ++I+ F   +RVD    +  K+ K G   D A +  +I GLC   ++  AL L+ +
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M G G  P+      LI                           LC          G+  
Sbjct: 170 MVGEGFQPNGVTYGTLIHG-------------------------LCKV--------GNSR 196

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A  LL++M++                    PN  +++ II+ L KD +++ AL++F EM
Sbjct: 197 AAIRLLRSMVQKN----------------CEPNVITYNTIIDCLFKDRQVNEALNIFSEM 240

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   NV  YN++I GLC  +  +    L+ EM +S   P      ++   LC+   V
Sbjct: 241 IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMV 300

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A ++V  M  +G EP V   T L+   C   +  EA +    MV++G  P+++ YS  
Sbjct: 301 TIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTL 360

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I+R+D A+ LF ++C     P++V YN +I GLC   R+ +A  LF+EM+  G 
Sbjct: 361 INGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQ 420

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           IP + TY +L++  CK+ ++DQAM  L + +E  + +PD+ +Y  +IDG+C  G  + A 
Sbjct: 421 IPDLVTYRILLDYLCKTRHLDQAMAML-KAIEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L++ +  KG  P+  T+  +I GLC       A   FR M   G  PD   +  +   F
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGF 539

Query: 651 LSELNPPLAFEVLKEM 666
           L       A ++L+EM
Sbjct: 540 LRNNETLSAIQLLQEM 555



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 229/504 (45%), Gaps = 32/504 (6%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
           K+M   G   D YTL  ++  +C+  + D   SV  +I   G   D   F+ L+      
Sbjct: 98  KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVE 157

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++ +A  L ++M     + N  T+  LIHG  K      A++L   M +     +   Y
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVKEIWE 265
           + II  L K++Q+  AL ++SEM   GI+P+    + +I      S+   +  L+ E+ +
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            + +  + +   +++  L   G +  A++++  MI+       GVE              
Sbjct: 278 SKIMPNVVIF-TTLVDALCKEGMVTIAHDVVDVMIQR------GVEP------------- 317

Query: 326 SFDIIINTLLKDG-----KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
             D++  T L DG     ++D A  +F  M + GC  NV  Y+ LI+G C   R++++  
Sbjct: 318 --DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM +    P   T N++   LC    +  A+ L  +M   G  P +    +L+  LC
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K     +A   L  +      PDI  Y+  I G+  +  ++ A +LF  + + G  PDV 
Sbjct: 436 KTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVW 495

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y I+I+GLC    +AEA  LF EM T G  P   TYNL+  G+ ++     A+  L  M
Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555

Query: 561 LEKESGSPDVITYTTLIDGLCIAG 584
           L +   S D  T T +++ L   G
Sbjct: 556 LGR-GFSADASTITLIVEMLSDDG 578



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 52/447 (11%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A +R+L + +V+  C  +      +I CL     V EA  +F ++  +G+  PN  +YN 
Sbjct: 197 AAIRLL-RSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGIS-PNVSTYNS 254

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           ++  LCK      V   + EM D     +    T L+   C  G    A  V + +I  G
Sbjct: 255 IIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRG 314

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              + V ++ L+       E+D+A ++ + M       N  ++  LI+G+ K  R+DKA+
Sbjct: 315 VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAM 374

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            LF++M +     +   Y+ +I GLC   +L  A+ L+ EM  SG  PD           
Sbjct: 375 YLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPD----------- 423

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                  L+   I  D        LC +          +DQA  +L+A I+G  +A    
Sbjct: 424 -------LVTYRILLD-------YLCKT--------RHLDQAMAMLKA-IEGSNLA---- 456

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  S++I+I+ + + G+L+ A  LF  ++  G   +V+ Y  +I+GLC
Sbjct: 457 -----------PDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               L E+ +L REM   G  P   T N + R   R  + + A+ L+++M  +G      
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             TL+++ L   G      + L + VQ
Sbjct: 566 TITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 167/628 (26%), Positives = 295/628 (46%), Gaps = 45/628 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN L++   ++  +D  ++  +EM + G   D++TL    Q  C  G++ +ALS+
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              I    +V   + ++ ++    +    ++A + + RM   +   N +T+ +L+ G + 
Sbjct: 299 ---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++   M   G      +++ ++   CK+     A +L  +M+     P + +
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTM----TLLCN----SIMRILVSNGSIDQAYN 294
            + LI S    GEL   V     ++  N M    T+L      S  R L   G  ++AY 
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++  M+                 G V P+TS++  +I  L    +++ A  LF+EM   G
Sbjct: 476 VIHEMMGN---------------GFV-PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  LID    +  +++++  L EM   G +PT  T  ++     + + V  A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD----------- 463
            L   M  +G  P V   T LI   CK G   +A +    M  +  +PD           
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 464 -----IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                +V Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CKA ++ EA
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++F++M+ +G  P+V TY+ LI+   K   +D  +  LS+MLE  S +P+++ YT +ID
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAPNIVIYTEMID 758

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL    + D+A  L   MEEKGC PN +T+ A+I G  K  +    L  FR M  KG  P
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  LI+   +  +   A+ +L+EM
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 277/627 (44%), Gaps = 55/627 (8%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+   C++   ++    L  ++D+G+   + T   L+QV+  + + D A  V  E+ +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  +DE        A  K G+  +A  LIE+ D      N   +  +I G  + S  ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKED---FVPNTILYNKMISGLCEASFFEE 326

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+   ++M  +    +   Y +++ G    KQL    ++ S M   G  P + I + L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIA 306
           +     + +   K             L   + +     G +   YN+L   I   GE   
Sbjct: 387 AYCKSDDFSYAYK-------------LLKKMEKCECKPGYV--VYNILIGSICSGGELPG 431

Query: 307 DVGVEML------MIFKGTV--SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
            V  E+       M+  GTV    N  SF      L   GK + A  +  EM   G + +
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSF---ARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y+ +I  LCN++R+E ++ L +EM+ +G  P  +T   +  C  +   +  A N + 
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL---- 474
           +M   G EP V   T LI    K  K   A      M+ +G  P+++ Y+A I G     
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 475 ---------------IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                           DI  VD+  ++  ++      P+VV Y  ++ GLCKA +V +A 
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK---PNVVTYGALVDGLCKAHKVKDAR 665

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DL   M   G  P+   Y+ LI+G+CK+  +D+A     +M+E+   +P+V TY++LID 
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER-GYNPNVYTYSSLIDR 724

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L    R D  + + ++M E  CAPN + +  +I GL K  +   A     MM+EKG KP+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  + A+I  F          E+ +EM
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREM 811



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 184/730 (25%), Positives = 306/730 (41%), Gaps = 126/730 (17%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +  +  RA ++   +++ +++ +    M    LGF  + L  VG   EA  L   +++E 
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL---IEKED 303

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             VPN   YN ++  LC++   +     L  M+      +  T   LL    N  Q  + 
Sbjct: 304 F-VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362

Query: 121 LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC---------NI---- 166
             + + +I  G +    +F+ L+ A+ K  +   A +L+++M+ C         NI    
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422

Query: 167 -------------------------------RLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
                                          ++N  +F   + GF    + +KA ++  +
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHE 479

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M  +GF  D + Y  +IG LC   ++E A  L+ EMKG+G+ P                 
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP----------------- 522

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                       DV T T+L +   +     G I QA+N L  M++       G E    
Sbjct: 523 ------------DVYTYTILIDCFSKA----GIIKQAHNWLDEMVRD------GCE---- 556

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P   ++  +I+  LK  K+ +A  LF  M   GC  NV  Y  LIDG C S  +
Sbjct: 557 ------PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI 610

Query: 376 EESYELLREME----------------ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           E++ ++   M                     KP   T  ++   LC+   V  A +L+  
Sbjct: 611 EKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLET 670

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M V G EP       LI   CK  K  EA      MV+ G+ P++  YS+ I  L   KR
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKR 730

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +DL L++   +  + C P++V Y  +I GL K  +  EA  L   M  KG  P+V TY  
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G+ K+G +D+  L L R +  +  +P+ +TYT LI+  C  G  D+A  L  EM++ 
Sbjct: 791 MIDGFGKAGKVDKC-LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT 849

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKE---KGMKPDMFVFVALISAFLSELNP 656
               +  ++  +I G       R  ++   +++E    G  P + ++  LI  F+     
Sbjct: 850 YWPKHVSSYCKVIEGY-----KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRL 904

Query: 657 PLAFEVLKEM 666
            +A E+ KE+
Sbjct: 905 EVALELHKEV 914



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 176/667 (26%), Positives = 292/667 (43%), Gaps = 68/667 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L      EEA M F    R   C+PN  +Y  LL        +   +  L  M   
Sbjct: 314 MISGLCEASFFEEA-MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAE 372

Query: 96  GWGYDKYTL-TPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVAFSKWGE 150
           G  Y  YT+   L+  YC S  F  A  +  ++       G+V   V++IL+ +    GE
Sbjct: 373 GC-YPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV---VYNILIGSICSGGE 428

Query: 151 VDKAC--ELIERMDDCNI-------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +      EL E+  +  +       ++N  +F   + GF    + +KA ++  +M  +GF
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGF 485

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------- 254
             D + Y  +IG LC   ++E A  L+ EMKG+G+ PD    + LI   S  G       
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 255 ELTLLVKEIWEDRDVNTMTLL-----------CNSIMRILVS------------------ 285
            L  +V++  E   V   TL+            N +  ++++                  
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 286 -NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDL 342
            +G+I++A  +   M     I DV  +M    K  V+  PN  ++  +++ L K  K+  
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDV--DMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L   M   GC  N  +Y+ LIDG C + +L+E+ E+  +M E G+ P  +T +S+  
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L + + +   L ++ KM      P +   T +I  L K  K  EA++ +  M ++G  P
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++V Y+A I G     +VD  LELFR++ + GC P+ V Y ++I+  C    + EA  L 
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM        V++Y  +I G+ +   +   +L     +EK   +P ++ Y  LID    
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLL---EEVEKNGSAPTILLYKVLIDNFVK 900

Query: 583 AGRPDDAIMLWNEM--EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           AGR + A+ L  E+          +  + +LI       +   A   F  M   G+ PD+
Sbjct: 901 AGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDL 960

Query: 641 FVFVALI 647
             FV L+
Sbjct: 961 GTFVHLL 967



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/631 (25%), Positives = 258/631 (40%), Gaps = 115/631 (18%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDK 153
           G+ +       LL V+   G +D+    F   I  D   V   + ++L+    + G  + 
Sbjct: 166 GYDHTPAVYIALLDVF-ERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNV 224

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A E + R+ D   +    T+  L+  F++  ++D A  +  +M++ G + D         
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQ 284

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LCK  +   AL L                                     E  D    T
Sbjct: 285 ALCKVGKWREALSLI------------------------------------EKEDFVPNT 308

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +L N ++  L      ++A + L  M     I                PN  ++ I++  
Sbjct: 309 ILYNKMISGLCEASFFEEAMDFLNRMRSTSCI----------------PNVQTYRILLCG 352

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            L   +L     +   M   GC  +  ++N+L+   C S+    +Y+LL++ME+   KP 
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE--------LCKHGKA 445
           +   N +   +C   ++ G +    ++  + +   +   T+L K         LC  GK 
Sbjct: 413 YVVYNILIGSICSGGELPGPVTF--ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKF 470

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--------------- 490
            +A++ + +M+  GF+PD   YS  IG L +  RV+ A  LF+++               
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 491 --C---------AH---------GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
             C         AH         GC P VV Y  +I    KA++V+ A +LF  MI KG 
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRML---------------EKESGSPDVITYTT 575
            P+V TY  LI+G+CKSGNI++A    +RM                   +  P+V+TY  
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+DGLC A +  DA  L   M   GC PN I + ALI G CK  +   A   F  M E+G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             P+++ + +LI     +    L  +VL +M
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 221/506 (43%), Gaps = 50/506 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE A  LF ++K  G+ VP+ Y+Y  L++   K+  +      L EM   G      T T
Sbjct: 505 VENAFFLFKEMKGTGV-VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM-DD 163
            L+  Y  + +   A  +F  +I  G + +   ++ L+  + K G ++KAC++  RM  D
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 164 CNI---------------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            +I               + N  T+  L+ G  K  +V  A  L + M   G   +  +Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D +I G CK  +L+ A +++ +M   G  P+    S LI     +  L L++K + +  +
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  ++   ++  L      D+AY L                MLM+ +    PN  +
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKL----------------MLMMEEKGCKPNVVT 787

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K GK+D  L LFREM   GC  N   Y  LI+  C +  L+E+Y LL EM+
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847

Query: 387 ESGFKPTHFTLNSMFRCLCR-----RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           ++ + P H +        C+     +++ + +L L+ ++   G  P +    +LI    K
Sbjct: 848 QT-YWPKHVS------SYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVK 900

Query: 442 HGKAMEAFRFLTDMVQEGF--LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            G+   A     +++            Y++ I       ++D A ELF D+   G  PD+
Sbjct: 901 AGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDL 960

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  ++ GL + +R  EA  L + +
Sbjct: 961 GTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 180/624 (28%), Positives = 289/624 (46%), Gaps = 19/624 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL +EA   F   KR G  V      N LL  L K+  ++L       M +    +D YT
Sbjct: 180 GLFDEAVSFFLGAKRNGFVV-GLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYT 238

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L+  +  +G   +   +  E+ + G     V +++++    + GEVD+A EL + MD
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  +  T+ +LI GF K+ R  +A  + ++M   G       Y  +I G  +     
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSG 358

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A ++  EM   G+  +      L T          LVK + +  D+     L N +  I
Sbjct: 359 EAFRVKEEMLARGVKLN------LFT-------YNALVKGVCKFGDMEKADALLNEM--I 403

Query: 283 LVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           +V      Q YN +++  +K +  + V   +  + K  + P   +  +IIN L + G ++
Sbjct: 404 MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIE 463

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +F  M  +G   N  +Y  LI G     R +E+  +L+ M++ G +P     NS+ 
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+ + +  A + + +M  +G +P V     LI   CK G+   A R+  +M+  G  
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIA 583

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+ V  +A I G         A  +FR +      PDV  Y+ +I GL +  ++  A +L
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
            +E + KGL+P V TYN +I+G+CK G I +A      M +K   SP++ITY  LI+GLC
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK-GISPNIITYNALINGLC 702

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            AG  + A  L++ +  KG A N +T+  +I G CK      A   F  M  KG+ PD F
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762

Query: 642 VFVALISAFLSELNPPLAFEVLKE 665
           V+ ALI     E N   A  +  E
Sbjct: 763 VYSALIDGCRKEGNTEKALSLFLE 786



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 275/591 (46%), Gaps = 31/591 (5%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EAN+L D            Y+Y  L+ A  ++ +    +  L EM++ G      T   +
Sbjct: 229 EANVLHDV-----------YTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   C +G+ D+A  +   +   G V D   +SIL+  F K     +A  ++E M    +
Sbjct: 278 IGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGL 337

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           +     +  LI GF+++    +A ++ ++M   G   +   Y+ ++ G+CK   +E A  
Sbjct: 338 KPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADA 397

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILV 284
           L +EM   GI PD +  + +I     E   + +   + E +  N +     C  I+  L 
Sbjct: 398 LLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLC 457

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            +GSI+ A  + + M+       +GV+          PN   +  +I   +++G+   A+
Sbjct: 458 RHGSIEDASRVFEIMV------SLGVK----------PNAVIYTTLIKGHVQEGRFQEAV 501

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            + + M + G   +V  YN++I GLC S ++EE+ + L EM E G KP  +T  ++    
Sbjct: 502 RILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGY 561

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+  ++  A    ++M   G  P     T LI   CK G   EA      M+     PD+
Sbjct: 562 CKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDV 621

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             YSA I GL+   ++  A+EL  +    G  PDV  YN IISG CK   + +A  L   
Sbjct: 622 RTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEY 681

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  KG+ P++ TYN LING CK+G I++A      +  K   + + +TY T+IDG C +G
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK-GLAHNAVTYATIIDGYCKSG 740

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
               A  L++EM  KG  P+   + ALI G  K      AL  F    +KG
Sbjct: 741 NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 280/626 (44%), Gaps = 27/626 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G  +E   L  +++ +G C P+  +YN ++  LC++  VD      K M   
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKG-CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKK 300

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D +T + L+  +    +  +A  +  E+   G    HV ++ L+  F + G+  +A
Sbjct: 301 GLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEA 360

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M    ++LN  T+  L+ G  K   ++KA  L ++M   G   D   Y+ +I G
Sbjct: 361 FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEG 420

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
             K +       L SEMK S + P       +I      G +     V EI     V   
Sbjct: 421 YLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPN 480

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            ++  ++++  V  G   +A  +L+ M K               KG V P+   ++ +I 
Sbjct: 481 AVIYTTLIKGHVQEGRFQEAVRILKVMDK---------------KG-VQPDVLCYNSVII 524

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K  K++ A     EM + G   NV+ Y  LI G C S  ++ +    +EM   G  P
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                 ++    C+      A ++ R M  +   P V+  + LI  L ++GK   A   L
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
           ++ +++G +PD+  Y++ I G      +  A +L   +C  G  P+++ YN +I+GLCKA
Sbjct: 645 SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
             +  A +LF+ +  KGL  +  TY  +I+G+CKSGN+ +A      M  K    PD   
Sbjct: 705 GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK-GVPPDSFV 763

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y+ LIDG    G  + A+ L+ E  +KG A    +  AL+ G CK  +   A      M 
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMV 822

Query: 633 EKGMKPDMFVFVALI-----SAFLSE 653
           +K +KPD   +  LI     + FL E
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKE 848



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 162/595 (27%), Positives = 274/595 (46%), Gaps = 32/595 (5%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDK 153
           G+     + + L  + CNS  F +A SV N++I    G   E +   L+ +  ++   + 
Sbjct: 96  GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSE-ILDSLIKSCKEFDLNNV 154

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
                   +D  +      F +LI G+ KK   D+A+  F    ++GF       + ++ 
Sbjct: 155 NGNENSNNNDRGV-----VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLS 209

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVN 270
            L K  +LE+  + Y+ M  + +  D    + LI +     +  E   L+ E+ E++  +
Sbjct: 210 DLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEM-EEKGCS 268

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI--------------- 315
              +  N ++  L   G +D+A+ L + M K   +ADV    ++I               
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328

Query: 316 ----FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
               F   + P   ++  +I+  ++ G    A  +  EM   G   N+F YN L+ G+C 
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +E++  LL EM   G KP   T N+M     + Q+     +L+ +M+     P    
Sbjct: 389 FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT 448

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++I  LC+HG   +A R    MV  G  P+ V Y+  I G +   R   A+ + + + 
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  PDV+ YN +I GLCK++++ EA+D   EMI +GL P+V TY  LI+G+CKSG + 
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A      ML       DV+  T LIDG C  G   +A  ++  M  +   P+  T+ AL
Sbjct: 569 VADRYFKEMLGCGIAPNDVVC-TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GL +  + + A+       EKG+ PD+F + ++IS F  +     AF++ + M
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM 682



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 151/643 (23%), Positives = 271/643 (42%), Gaps = 62/643 (9%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N ++YN L++ +CK   ++  +  L EM   G   D  T   +++ Y       +   + 
Sbjct: 375 NLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+     V   +   +++    + G ++ A  + E M    ++ N   +  LI G V++
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQE 494

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R  +A+++   M K G   D   Y+ +I GLCK++++E A     EM   G+ P+    
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             LI      GE+ +  +   E     +    ++C +++      GS  +A ++ + M+ 
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                            +V P+  ++  +I+ LL++GKL  A+ L  E  + G + +VF 
Sbjct: 615 R----------------SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++I G C    + ++++L   M + G  P   T N++   LC+  ++  A  L   + 
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718

Query: 422 VQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +G    + HN +    +I   CK G   +AFR   +M  +G  PD   YSA I G    
Sbjct: 719 GKG----LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKE 774

Query: 478 KRVDLALELFRDICAHGCC----------------------------------PDVVAYN 503
              + AL LF +    G                                    PD V Y 
Sbjct: 775 GNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I   CK   + EAE  F +M  + L+P+  TY  L++G+  +G   +       M+ K
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   PD +T++ +ID     G     + L ++M +KG   ++     LI  LC+ +    
Sbjct: 895 DI-EPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSE 953

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L     ++E+G+   +     L+  F        A  VLK M
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 250/589 (42%), Gaps = 55/589 (9%)

Query: 28   MSPGALGFLIRCLGSV--GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A+ +     G V  G  +EA  +   + ++G+  P+   YN ++  LCKS  ++  
Sbjct: 477  VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV-QPDVLCYNSVIIGLCKSRKMEEA 535

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV-A 144
            +  L EM + G   + YT   L+  YC SG+   A   F E++  G     V    L+  
Sbjct: 536  KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDG 595

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            + K G   +A  +   M   ++  + +T+  LIHG ++  ++  A++L  +  + G   D
Sbjct: 596  YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPD 655

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
               Y+ II G CK   +  A QL+  M   GI+P+    + LI                 
Sbjct: 656  VFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING--------------- 700

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                      LC +        G I++A  L    I G+ +A                N 
Sbjct: 701  ----------LCKA--------GEIERARELFDG-IPGKGLAH---------------NA 726

Query: 325  SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             ++  II+   K G L  A  LF EMT  G   + F+Y+ LIDG       E++  L  E
Sbjct: 727  VTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE 786

Query: 385  MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
              + GF  T  +LN++    C+   V+ A  L+  M  +  +P     T+LI   CK G 
Sbjct: 787  SVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845

Query: 445  AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              EA +F  DM +   +P+ + Y+A + G     R      LF ++ A    PD V +++
Sbjct: 846  LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +I    K     +   L ++M+ KG   S    ++LI+  C+  ++ + +  L + +E++
Sbjct: 906  MIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEK-IEEQ 964

Query: 565  SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              +  + T +TL+     AG+ D A  +   M      P+      LI 
Sbjct: 965  GLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 204/509 (40%), Gaps = 99/509 (19%)

Query: 46   VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            +EEA     ++   GL  PN Y+Y  L+   CKS  + + +   KEM   G   +    T
Sbjct: 532  MEEAKDYLVEMIERGL-KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCT 590

Query: 106  PLLQVYCNSGQFDKALSVF-----------------------------------NEIIDH 130
             L+  YC  G   +A S+F                                   +E ++ 
Sbjct: 591  ALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650

Query: 131  GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            G V D   ++ ++  F K G + KA +L E M    I  N  T+  LI+G  K   +++A
Sbjct: 651  GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710

Query: 190  LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             +LFD +   G A +A  Y  II G CK+  L  A +L+ EM   G+ PD  + S LI  
Sbjct: 711  RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770

Query: 250  CSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
            C  EG     L+L ++ + +    +T +L  N++M     +G + +A  LL+ M+     
Sbjct: 771  CRKEGNTEKALSLFLESVQKGF-ASTSSL--NALMDGFCKSGKVIEANQLLEDMVDKH-- 825

Query: 306  ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                          V P+  ++ I+I+   K G L  A   F +M +   M N   Y  L
Sbjct: 826  --------------VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTAL 871

Query: 366  IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC---------------------- 403
            + G   + R  E + L  EM     +P   T + M                         
Sbjct: 872  LSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGG 931

Query: 404  -------------LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                         LCR++ V   L ++ K+  QG    +   + L++   K GK   A R
Sbjct: 932  NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAAR 991

Query: 451  FLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
             L  MV+  ++PD    S  +  LI++++
Sbjct: 992  VLKSMVRFKWVPD----STELNDLINVEQ 1016



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 161/360 (44%), Gaps = 17/360 (4%)

Query: 28   MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            +SP  + +  LI  L   G +E A  LFD +  +GL   N  +Y  +++  CKS ++   
Sbjct: 687  ISPNIITYNALINGLCKAGEIERARELFDGIPGKGL-AHNAVTYATIIDGYCKSGNLSKA 745

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
                 EM   G   D +  + L+      G  +KALS+F E +  G+      + L+  F
Sbjct: 746  FRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGF 805

Query: 146  SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
             K G+V +A +L+E M D +++ +  T+ +LI    K   + +A Q F  M K     +A
Sbjct: 806  CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865

Query: 206  AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
              Y  ++ G     +      L+ EM    I PD    S +I +   EG+          
Sbjct: 866  LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGD---------- 915

Query: 266  DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
               V T+ L+ + + +    N S +  + L+  + + E +++V   +  I +  ++ + +
Sbjct: 916  --HVKTLKLVDDMLKK--GGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLA 971

Query: 326  SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            +   ++    K GK+D A  + + M +   + +    N+LI+   +S   E + + L++M
Sbjct: 972  TCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 262/552 (47%), Gaps = 30/552 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDK--ALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACE 156
           D+  L   L+  C SG   +  A SVFN +ID         F+ LL A +K         
Sbjct: 54  DRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVIS 113

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           L +RM    +  +  T  +LI+ +   ++VD  L +  +M + G + +   +  ++ GLC
Sbjct: 114 LYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC 173

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN------ 270
              ++  A  L  +M   G  P+      L+      G   L VK   E  + N      
Sbjct: 174 LGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVT 233

Query: 271 -TMTLLCN-SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSF 327
               L+C  +I+  L  +G ID+                 G E+ +  KG  +SP+  ++
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDK-----------------GKELFLEMKGRGISPDVVAY 276

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             II+ +   G+ + A  LF EM   G   NV  +N LID LC + ++EE+  LL+ M +
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P  FT N++    C    +  A +L   M  +G E       +LI   CK G+ +E
Sbjct: 337 RGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE 396

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +   +M+ +  +P ++ Y+  + GL    +V  A  LF ++  H   P+   YNI++ 
Sbjct: 397 AKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLD 456

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLCK   ++EA +LF+ +      PS+  +N LI+G CK+  I+ A    +R L  E   
Sbjct: 457 GLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR-LSHEGLE 515

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+VITYT +I GLC +G+ ++A  L+  MEEKGCAPN +TF  L+ G C+ D  +  +  
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575

Query: 628 FRMMKEKGMKPD 639
            + M EK   PD
Sbjct: 576 LQEMAEKDFSPD 587



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 248/528 (46%), Gaps = 32/528 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P   S+N LL A+ K      V    K M   G   D  TL  L+  YCN  + D  L+
Sbjct: 89  TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  E++  G     V F+ L+        + +A  L+ +M     R N  T+  L++G  
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 182 KKSRVDKALQLFDKM--TKSGFA----SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
                  A++L ++M     GF      +   Y  II  LCK+  ++   +L+ EMKG G
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 236 ITPDFEILSKLITS-CSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           I+PD    S +I   C     EG   L  + + E    N +T   N ++  L   G +++
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF--NVLIDALCKAGKMEE 326

Query: 292 AYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           A +LL+ MI +GE                 SP+T +++ +I+    +G++D A  LF  M
Sbjct: 327 ANHLLKLMIQRGE-----------------SPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +   YN LI+G C S R+ E+ +L REM      PT  T N++   L R   V
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A NL  +M+V    P      +L+  LCK+    EA      +    F P I  ++  
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL   +++++A ELF  +   G  P+V+ Y ++I GLCK+ ++  A+DLF  M  KG 
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            P++ T+N L+ G+C++  + + +  L  M EK+  SPD  T + ++D
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF-SPDASTISIVVD 596



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 181/352 (51%), Gaps = 7/352 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P  SSF+ ++  + K  +    +SL++ M+ IG   +    N LI+  CN N+++    
Sbjct: 89  TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L EM   G  P   T  S+ + LC    +  A  L+RKM   G+ P V     L+  LC
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 441 KHGKAMEAFRFLTDMVQE--GF----LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
             G  M A +   +M+    GF     P++VCY   I  L     +D   ELF ++   G
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVVAY+ II G+C   R   A+ LFNEM+ +G+ P+V T+N+LI+  CK+G +++A 
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  M+++   SPD  TY TLIDG C+ GR DDA  L+  ME KG   + +++  LI G
Sbjct: 329 HLLKLMIQRGE-SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            CK  R   A   +R M  K + P +  +  L++    E     A+ +  EM
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 186/403 (46%), Gaps = 27/403 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN   Y  ++++LCK   +D  +    EM+  G   D    + ++   C++G+++ A  +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           FNE++D G     V F++L+ A  K G++++A  L++ M       +  T+  LI GF  
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + R+D A  LF  M   G  +DA  Y+V+I G CK+ ++  A +LY EM    I P    
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 243 LSKLITSCSDEGELTLLVKEIW------EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + L+T    EG+    V++ W      +  D+   +   N ++  L  N  + +A  L 
Sbjct: 416 YNTLLTGLFREGK----VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELF 471

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             +   +                  P+   F+ +I+ L K  K+++A  LF  ++  G  
Sbjct: 472 HYLENHD----------------FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLE 515

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  Y  +I GLC S +LE + +L   MEE G  P   T N++ R  C+  ++   + L
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +++M  +   P     ++++  L K  K  E    L     +G
Sbjct: 576 LQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 220/522 (42%), Gaps = 34/522 (6%)

Query: 40  LGSVGLVEEANMLFDQVKREGLC--VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           LG+V  ++    +    KR  L    P+  + N L+   C    VD     L EM   G 
Sbjct: 99  LGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGH 158

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE 156
             +  T T L++  C   +  +A  +  +++  G+    V +  LL      G    A +
Sbjct: 159 SPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVK 218

Query: 157 LIERMDDCN------IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           L E M + N      I+ N   +C +I    K   +DK  +LF +M   G + D   Y  
Sbjct: 219 LHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSS 278

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWED 266
           II G+C   + E A  L++EM   G+ P+    + LI +    G++     LL   I   
Sbjct: 279 IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM---------------IKGEPIADVGVE 311
              +T T   N+++      G ID A +L  +M               I G   +   VE
Sbjct: 339 ESPDTFTY--NTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE 396

Query: 312 MLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
              +++      + P   +++ ++  L ++GK+  A +LF EM           YN L+D
Sbjct: 397 AKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLD 456

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC +N L E+ EL   +E   F+P+    N +   LC+ + +  A  L  ++  +G EP
Sbjct: 457 GLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEP 516

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   T++I  LCK G+   A      M ++G  P++V ++  + G      +   +EL 
Sbjct: 517 NVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELL 576

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
           +++      PD    +I++  L K ++  E   L      +G
Sbjct: 577 QEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 11/296 (3%)

Query: 364 NLIDGLCNSNRLE--ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           N +   C S  ++  E++ +   + +    P   + N++   + + +     ++L ++M 
Sbjct: 60  NFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMS 119

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           + G  P      +LI   C   K       L +M++ G  P+ V +++ + GL    R+ 
Sbjct: 120 LIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRIS 179

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG------LIPSVA 535
            A  L R +   G  P+VV Y  +++GLC       A  L  EM+         + P++ 
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            Y  +I+  CK G ID+       M  K  G SPDV+ Y+++I G+C  GR + A  L+N
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEM--KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           EM ++G  PN +TF  LI  LCK  +   A    ++M ++G  PD F +  LI  F
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++K   L  P + +YN LL+ LCK+         L E  +     + + 
Sbjct: 427 GKVRDAWNLFGEMKVHDL-TPESCTYNILLDGLCKN-------NHLSEAMELFHYLENHD 478

Query: 104 LTPLLQVY-------CNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKA 154
             P +Q++       C + + + A  +FN +  H  ++ +V  +++++    K G+++ A
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIARELFNRL-SHEGLEPNVITYTVMIHGLCKSGQLENA 537

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L   M++     N  TF  L+ GF +   + K ++L  +M +  F+ DA+   +++  
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597

Query: 215 LCKNKQLEMALQLYSEMKGSGIT 237
           L K+++    L L       G T
Sbjct: 598 LSKDEKYREYLHLLPTFPAQGQT 620


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 184/680 (27%), Positives = 288/680 (42%), Gaps = 94/680 (13%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN LL  + +  + D ++  L EM   G+G    T   ++     + +  +   V   +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +      ++ L+ AFS     D    L ++M +         F  LI GF K+ RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D AL L D+M  S   +D  +Y+V I    K  +++MA + + E++ +G+ PD    + +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I        L   V E++E  + N     T   N+++    S G  D+AY+LL+      
Sbjct: 280 IGVLCKANRLDEAV-EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 304 PIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            I  V                 E L +F   K   +PN S+++I+I+ L + GKLD A  
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M + G   NV   N ++D LC S +L+E+  +  +M+     P   T  S+   L 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG------ 459
           +   V  A  +  KM            T LIK    HG+  +  +   DMV +       
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQ 518

Query: 460 -----------------------------FLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                                        F+PD   YS  I GLI     +   ELF  +
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT-------------- 536
              GC  D  AYNI+I G CK  +V +A  L  EM TKG  P+V T              
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 537 ---------------------YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
                                Y+ LI+G+ K G ID+A L L  +++K   +P+V T+ +
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNVYTWNS 697

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+D L  A   ++A++ +  M+E  C PN++T+  LI GLCK  +   A V ++ M+++G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757

Query: 636 MKPDMFVFVALISAFLSELN 655
           MKP    +  +IS      N
Sbjct: 758 MKPSTISYTTMISGLAKAGN 777



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 163/624 (26%), Positives = 295/624 (47%), Gaps = 31/624 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I   G VG V+ A   F +++  GL  P+  +Y  ++  LCK+  +D      + ++   
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
                Y    ++  Y ++G+FD+A S+       G +   + ++ +L    K G+VD+A 
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            + E M   +   N  T+ +LI    +  ++D A +L D M K+G   +    ++++  L
Sbjct: 364 RVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTM 272
           CK+++L+ A  ++ +M     TPD      LI      G +    K I+E   D D  T 
Sbjct: 423 CKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK-IYEKMLDSDCRTN 481

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GEPIADVGVEM 312
           +++  S+++   ++G  +  + + + M+                     GEP  + G  M
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP--EKGRAM 539

Query: 313 LMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
               K     P+  S+ I+I+ L+K G  +    LF  M + GC+ +   YN +IDG C 
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             ++ ++Y+LL EM+  GF+PT  T  S+   L +   +  A  L  + + +  E  V  
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            + LI    K G+  EA+  L +++Q+G  P++  +++ +  L+  + ++ AL  F+ + 
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
              C P+ V Y I+I+GLCK ++  +A   + EM  +G+ PS  +Y  +I+G  K+GNI 
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A     R  +   G PD   Y  +I+GL    R  DA  L+ E   +G   +  T + L
Sbjct: 780 EAGALFDR-FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVL 838

Query: 612 ITGLCKCDRPRAALVHFRMMKEKG 635
           +  L K D    A +   +++E G
Sbjct: 839 LDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/636 (25%), Positives = 299/636 (47%), Gaps = 28/636 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR     G V+ A  L D++K   L   +   YN  +++  K   VD+      E++  
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDA-DIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKA 154
           G   D+ T T ++ V C + + D+A+ +F  +  +  V   + ++ +++ +   G+ D+A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ER        +   +  ++    K  +VD+AL++F++M K   A + + Y+++I  
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDM 386

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
           LC+  +L+ A +L   M+ +G+ P+   ++ ++       +L      I+E  D    T 
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA-IFEQMDYKVCTP 445

Query: 274 ---LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                C S++  L   G +D AY + + M+  +                   N+  +  +
Sbjct: 446 DEITFC-SLIDGLGKVGRVDDAYKIYEKMLDSD----------------CRTNSIVYTSL 488

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I      G+ +    ++++M    C  ++ L N  +D +  +   E+   +  E++   F
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   + + +   L +         L   M+ QG     +   ++I   CK GK  +A++
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M  +GF P +V Y + I GL  I R+D A  LF +  +     +VV Y+ +I G  
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  R+ EA  +  E++ KGL P+V T+N L++   K+  I++A++C   M E +  +P+ 
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKC-TPNQ 727

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY  LI+GLC   + + A + W EM+++G  P+ I++  +I+GL K      A   F  
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPL-AFEVLKE 665
            K  G  PD   + A+I   LS  N  + AF + +E
Sbjct: 788 FKANGGVPDSACYNAMIEG-LSNGNRAMDAFSLFEE 822



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 1/271 (0%)

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + NS+   + R ++      ++ +M V G  P V     ++    K  K  E F  + +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +  F P    Y+  IG    +   D+ L LF+ +   G  P V  +  +I G  K  RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  L +EM +  L   +  YN+ I+ + K G +D A       +E     PD +TYT+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTS 278

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +I  LC A R D+A+ ++  +E+    P    +  +I G     +   A       + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             P +  +  +++          A  V +EM
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 2/232 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++  R+    +L ++    R  ++      LI   G VG ++EA ++ +++ ++GL  P
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TP 690

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N Y++N LL+AL K+  ++   +  + M++     ++ T   L+   C   +F+KA   +
Sbjct: 691 NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G     + ++ ++   +K G + +A  L +R        +   +  +I G    
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +R   A  LF++  + G         V++  L KN  LE A  + + ++ +G
Sbjct: 811 NRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/451 (32%), Positives = 235/451 (52%), Gaps = 25/451 (5%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEI 263
           ++ I+G L K K    A+ L+ +M+  GI PD   L+ LI      G++T    +L K +
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                 NT+TL  N++M+ L   G + ++ +        + +   G +M          +
Sbjct: 73  KLGYQPNTITL--NTLMKGLCLKGEVKKSLHF------HDKVVAQGFQM----------D 114

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+  ++N L K G+   AL L R +       NV +YN +IDGLC    + E+Y+L  
Sbjct: 115 QVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM+  G  P   T +++    C    ++ A  L+ +M ++   P V   T+L+  LCK G
Sbjct: 175 EMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEG 234

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA   L  M +EG  P++V Y+  + G   I  V  A ++F  +   G  P+V +YN
Sbjct: 235 KVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN 294

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I  LCK++RV EA +L  E++ K ++P+  TY+ LI+G+CK G I  A+  L  M  +
Sbjct: 295 IMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354

Query: 564 ESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             G P DV+TYT+L+D LC     D A  L+ +M+E+G  PN+ T+ ALI GLCK  R +
Sbjct: 355 --GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHK 412

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            A   F+ +  KG + +++ +  +IS    E
Sbjct: 413 NAQKLFQHLLVKGCRINVWTYNVMISGLCKE 443



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 233/507 (45%), Gaps = 23/507 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P    +N ++ +L K           K+MQ  G   D +TL  L+  +C+ GQ   + +
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +I+  G+    +  + L+      GEV K+    +++     ++++ ++  L++G  
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K      AL+L   +       +  MY+ II GLCK+K +  A  LYSEM   GI P+  
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 242 ILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             S LI      G+L     LL + I ++ + N  T     +M  L   G + +A NLL 
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI--LMDALCKEGKVKEAKNLLA 244

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M K                  V PN  S++ +++     G++  A  +F  M Q G   
Sbjct: 245 VMTKE----------------GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           NV+ YN +ID LC S R++E+  LLRE+      P   T +S+    C+   +  AL+L+
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           ++M  +G    V   T L+  LCK+    +A      M + G  P+   Y+A I GL   
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            R   A +LF+ +   GC  +V  YN++ISGLCK   + EA  + ++M   G IP   T+
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKE 564
            ++I    +    D+A   L  M+ K+
Sbjct: 469 EIIIRSLFEKDQNDKAEKLLHEMIAKD 495



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 189/347 (54%), Gaps = 3/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F+ I+ +L+K      A+SLF++M   G   ++F  N LI+  C+  ++  S+ 
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKEL 439
           +L ++ + G++P   TLN++ + LC + +V  +L+   K+  QG +   V + TLL   L
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL-NGL 125

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +      P++V Y+  I GL   K V+ A +L+ ++ A G  P+V
Sbjct: 126 CKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV 185

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y+ +I G C A ++ EA  L NEMI K + P+V TY +L++  CK G + +A   L+ 
Sbjct: 186 ITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV 245

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M  KE   P+V++Y TL+DG C+ G   +A  +++ M +KG  PN  ++  +I  LCK  
Sbjct: 246 M-TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A+   R +  K M P+   + +LI  F        A ++LKEM
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA  L  +V  + + VPN  +Y+ L++  CK   +      LKEM   G   D  T T
Sbjct: 306 VDEAMNLLREVLHKNM-VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            LL   C +   DKA ++F ++ + G   +++ ++ L+    K G    A +L + +   
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
             R+N  T+ V+I G  K+  +D+AL +  KM ++G   DA  +++II  L +  Q + A
Sbjct: 425 GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484

Query: 225 LQLYSEM 231
            +L  EM
Sbjct: 485 EKLLHEM 491


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 175/625 (28%), Positives = 291/625 (46%), Gaps = 48/625 (7%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +  L+  + +    D+V    K+M+      + Y+ T L++ +C+  +   ALS
Sbjct: 78  LPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALS 137

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            F +I   G+    V F+ LL        + +A +L  +M     + N  TF  L++G  
Sbjct: 138 TFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLC 193

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDF 240
           ++ RV +A+ L D+M + G   +   Y  I+ G+CK      AL L  +M+  S I P+ 
Sbjct: 194 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNV 253

Query: 241 EILSKLITSCSDEGE--------LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            I + +I     +G         + +  KEI+ D       +  N ++     +G    A
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD------IVTYNCMINGFCISGRWSDA 307

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LLQ M++ +                ++P+  +F  +IN  +K+GK   A  L+ EM  
Sbjct: 308 EQLLQEMLERK----------------INPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
              + +   Y+++IDG C  NRL+ +  +       G  P   T N++    CR + V  
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDD 411

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
            + L+ +M   G        T LI   C+ G    A   L +M+  G  P++V  +  + 
Sbjct: 412 GIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLD 471

Query: 473 GLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           GL D  ++  ALE+F+       DI A    +G  PDV  YNI+I GL    +  EAE+L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           + EM  +G++P   TY+ +I+G CK   +D+A      M  K S SPDV+T+ TLI G C
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK-SFSPDVVTFNTLITGYC 590

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            AG  DD + L+ EM ++G   + IT++ LI G  K D    AL  F+ M   G+ PD  
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               +++   S+     A  +L+++
Sbjct: 651 TIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 261/586 (44%), Gaps = 47/586 (8%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   L++C  S   +  A   F ++ + G   P   ++N LL  LC       VE R+ E
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFH-PTVVTFNTLLHGLC-------VEDRISE 169

Query: 92  MQDYGWGYDK---YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
             D      K    T T L+   C  G+  +A+++ + +++ G     + +  ++    K
Sbjct: 170 ALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 148 WGEVDKACELIERMDD-CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
            G+   A  L+ +M++  +I  N   +  +I G  K  R   A  LF +M +     D  
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y+ +I G C + +   A QL  EM    I PD    S LI +   EG+     +E++++
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKF-FEAEELYDE 348

Query: 267 ---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              R +   T+  +S++        +D A ++                 L   KG  SP+
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMF---------------YLTPTKG-CSPD 392

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +F+ +I    +  ++D  + L  EMT+ G + N   Y  LI G C    L  + +LL+
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-----------VQGHEPWVKHN 432
           EM  SG  P   T N++   LC    +  AL + + M+             G EP V+  
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI  L   GK +EA     +M   G +PD + YS+ I GL    R+D A ++F  + +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               PDVV +N +I+G CKA  V +  +LF EM  +G++    TY  LI G+ K  NID 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 553 AMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           A+     M+   SG  PD IT   ++ GL      + A+ +  +++
Sbjct: 633 ALDIFQEMI--SSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 166/360 (46%), Gaps = 35/360 (9%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD A+ LF  M +   + +V  +  L+  +    R +    L ++ME        ++   
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTL------------------------ 434
           + +C C    +  AL+   K+   G  P  V  NTL                        
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181

Query: 435 ------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                 L+  LC+ G+ +EA   L  M+++G  P+ + Y   + G+  +     AL L R
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 489 DI--CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            +   +H   P+VV YN II GL K  R ++A +LF EM  K + P + TYN +ING+C 
Sbjct: 242 KMEEVSH-IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCI 300

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           SG    A   L  MLE++  +PDV+T++ LI+     G+  +A  L++EM  +   P+ +
Sbjct: 301 SGRWSDAEQLLQEMLERKI-NPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+ ++I G CK +R  AA   F +   KG  PD+  F  LI+ +          ++L EM
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 40/195 (20%)

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVA------------------------------- 535
           SG  + + + +A DLF  M+    +PSV                                
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 536 ----TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
               ++ +L+  +C    +  A+    + + K    P V+T+ TL+ GLC+  R  +A+ 
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGK-ITKLGFHPTVVTFNTLLHGLCVEDRISEALD 172

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+++M    C PN +TF  L+ GLC+  R   A+     M E G++P+   +  ++    
Sbjct: 173 LFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC 228

Query: 652 SELNPPLAFEVLKEM 666
              +   A  +L++M
Sbjct: 229 KMGDTVSALNLLRKM 243


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 176/629 (27%), Positives = 282/629 (44%), Gaps = 93/629 (14%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L    +VE A  L+ Q+   G+  P+  ++N L+  L K   V   E+ L ++  Y    
Sbjct: 173 LAKFEMVEGARNLYKQMLNSGI-QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D +T T L+  +C +   D A  VF+ ++  G                            
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG---------------------------- 263

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
               C+   N  T+  LI+G   + RVD+AL + ++M + G       Y + I  LC  +
Sbjct: 264 ----CDP--NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIE 317

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             E A++L + MK  G  P+ +  + LI+  S  G+L + +                   
Sbjct: 318 HEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI------------------- 358

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                                        G+   M+ +G V PNT +++ +IN L   G+
Sbjct: 359 -----------------------------GLYHKMLKEGLV-PNTVTYNALINELCVGGR 388

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              AL +F  M   G + N   YN +I GLC    +E++  L  +M + G  PT  T N+
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEP--WVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +      + +V  A  L+  M+  G EP  W  +   L+    K GK   A  +  +MV+
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE--LVSGFSKWGKLESASFYFQEMVE 506

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P+ V Y+A I G     +VD+AL L + +   GC P+V +YN +I+GL K  R +E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           AE + ++M+ +GL+P+V TY  LI+G C++G    A      M EK    P++ TY++LI
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLI 625

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GLC  G+ D+A      M E GC P   T+  L++GLC+  R   A    + MKE+G  
Sbjct: 626 YGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 681

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           PD  ++ +L+ A    L    A ++   +
Sbjct: 682 PDREIYYSLLIAHCKNLEVDHALKIFHSI 710



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 288/609 (47%), Gaps = 32/609 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L F  LI  L   G V EA ++  Q+ +  L  P+ ++Y  L+   C++ ++DL 
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLA 252

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
                 M   G   +  T + L+   CN G+ D+AL +  E+I+ G     + +++ + A
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                  ++A EL+ RM     R N +T+  LI G  +  +++ A+ L+ KM K G   +
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVK 261
              Y+ +I  LC   +   AL+++  M+G G   + +  +++I      G++    +L +
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG--EPIADVGVEMLMIFKG- 318
           ++ +   + T+    N+++   ++ G+++ A  LL  M +   EP      E++  F   
Sbjct: 433 KMLKMGPLPTVVTY-NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491

Query: 319 ----------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++PN  S+  +I+   KDGK+D+ALSL + M ++GC  NV  Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I+GL   NR  E+ ++  +M E G  P   T  ++   LCR      A  +   M  
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P +   + LI  LC+ GKA EA R    M + G  P +  YS  + GL    R   
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYE 667

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A +L +D+   G CPD   Y  ++   CK   V  A  +F+ +  KG    ++ Y  LI 
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 727

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             CK+G +++A      MLEKE  + D I +T L+DGL   G  D  + L + ME K   
Sbjct: 728 ALCKAGQVEEAQALFDNMLEKEWNA-DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 786

Query: 603 PNRITFMAL 611
           PN  T++ L
Sbjct: 787 PNIQTYVIL 795



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 229/526 (43%), Gaps = 83/526 (15%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I     +  + +     ++++  GF       + ++  L K + +E A  LY +M  S
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           GI P                                   L  N+++ IL   G + +A  
Sbjct: 193 GIQPSL---------------------------------LTFNTLINILSKKGKVREAEL 219

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L                  IF+  +SP+  ++  +I    ++  LDLA  +F  M + G
Sbjct: 220 ILS----------------QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  N   Y+ LI+GLCN  R++E+ ++L EM E G +PT +T       LC  +    A+
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            LV +M+ +G  P V+  T LI  L + GK   A      M++EG +P+ V Y+A I  L
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R   AL++F  +  HG   +   YN II GLC    + +A  LF +M+  G +P+V
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEK----------------------ESGS----- 567
            TYN LING+   GN++ A   L  M E                       ES S     
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 568 -------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                  P+ ++YT LIDG    G+ D A+ L   MEE GC PN  ++ A+I GL K +R
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A      M E+G+ P++  +  LI           AF++  +M
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 249/559 (44%), Gaps = 60/559 (10%)

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N  +  +     NEI   G+    +  + LL+  +K+  V+ A  L ++M +  I+ +  
Sbjct: 140 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 199

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  LI+   KK +V +A  +  ++ +   + D   Y  +I G C+N+ L++A  ++  M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  P+    S LI                           LCN         G +D+
Sbjct: 260 VKEGCDPNSVTYSTLING-------------------------LCNE--------GRVDE 286

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSFDIIIN 332
           A ++L+ MI+      V    L I                    K    PN  ++  +I+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L + GKL++A+ L+ +M + G + N   YN LI+ LC   R   + ++   ME  G   
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKAMEAFRF 451
              T N + + LC   D+  A+ L  KM   G  P V  +NTL+   L K G    A R 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK-GNVNNAARL 465

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  M + G  PD   Y+  + G     +++ A   F+++   G  P+ V+Y  +I G  K
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +V  A  L   M   G  P+V +YN +ING  K     +A     +M+E +   P+VI
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE-QGLLPNVI 584

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TYTTLIDGLC  GR   A  ++++ME++ C PN  T+ +LI GLC+  +   A      M
Sbjct: 585 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERM 640

Query: 632 KEKGMKPDMFVFVALISAF 650
            E G +P +  +  L+S  
Sbjct: 641 SEIGCEPTLDTYSTLVSGL 659



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 230/497 (46%), Gaps = 32/497 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G +E A  L+ ++ +EGL VPN  +YN L+  LC              M+ +
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   +++  C  G  +KA+ +F +++  G +   V ++ L+  +   G V+ A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++ M +     +E T+  L+ GF K  +++ A   F +M + G   +   Y  +I G
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWED---RD 268
             K+ ++++AL L   M+  G  P+ E  + +I   S E   +   K   ++ E     +
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T L + + R    NG    A+ +   M K + +                PN  ++ 
Sbjct: 583 VITYTTLIDGLCR----NGRTQFAFKIFHDMEKRKCL----------------PNLYTYS 622

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L ++GK D A      M++IGC   +  Y+ L+ GLC   R  E+ +L+++M+E 
Sbjct: 623 SLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 678

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GF P      S+    C+  +V  AL +   +  +G +  +     LI  LCK G+  EA
Sbjct: 679 GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEA 738

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                +M+++ +  D + ++  + GL+    +DL ++L   + +    P++  Y I+   
Sbjct: 739 QALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRE 798

Query: 509 LCKAQRVAEAEDLFNEM 525
           L +  +  E+E L +++
Sbjct: 799 LSRIGKSIESEPLADKL 815



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 29/406 (7%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           CLG  G +E+A +LF+++ + G  +P   +YN L+       +V+     L  M++ G  
Sbjct: 419 CLG--GDIEKAMVLFEKMLKMG-PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL 157
            D++T   L+  +   G+ + A   F E+++ G     V ++ L+   SK G+VD A  L
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++RM++     N +++  +I+G  K++R  +A ++ DKM + G   +   Y  +I GLC+
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLL 275
           N + + A +++ +M+     P+    S LI     EG+      + EI  +  ++T + L
Sbjct: 596 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTL 655

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIFKGTV 320
            + + R     G   +A  L++ M +     D  +                 L IF    
Sbjct: 656 VSGLCR----KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 711

Query: 321 SP----NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           +     + S +  +I  L K G+++ A +LF  M +     +  ++  L+DGL     L+
Sbjct: 712 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 771

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
              +LL  ME   F P   T   + R L R    + +  L  K++V
Sbjct: 772 LCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 268/587 (45%), Gaps = 86/587 (14%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F +++        V F+ LL A +K  + +    L E+M    I  +  T+ 
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           + I+ F ++S++  AL +  KM K G+  D      ++ G C +K++  A+ L  +M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD                                 T    +++  L  +    +A  
Sbjct: 183 GYKPD---------------------------------TFTFTTLIHGLFLHNKASEAVA 209

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M++               +G   P+  ++  ++N L K G +DLALSL ++M +  
Sbjct: 210 LVDQMVQ---------------RG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V +YN +IDGLC    ++++  L  EM+  G +P  FT +S+  CLC       A 
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V   + LI    K GK +EA +   +M++    PDI  YS+ I G 
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI--- 531
               R+D A  +F  + +  C P+VV Y+ +I G CKA+RV E  +LF EM  +GL+   
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433

Query: 532 --------------------------------PSVATYNLLINGWCKSGNIDQAMLCLSR 559
                                           P++ TYN+L++G CK+G + +AM+    
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-E 492

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L++ +  PD+ TY  +I+G+C AG+ +D   L+  +  KG +PN I +  +I+G C+  
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A    + MKE G  P+   +  LI A L + +   + E++KEM
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 273/582 (46%), Gaps = 30/582 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+VKSR F S      L+  +  +   E    L +Q++  G+   + Y+Y+  +   
Sbjct: 70  LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCF 128

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           C+   + L    L +M   G+  D  TL+ LL  YC+S +   A+++ +++++ G+  D 
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             F+ L+       +  +A  L+++M     + +  T+  +++G  K+  +D AL L  K
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           M K    +D  +Y+ II GLCK K ++ AL L++EM   GI PD    S LI+   + G 
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308

Query: 255 --ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             + + L+ ++ E R +N   +  ++++   V  G + +A  L   MIK           
Sbjct: 309 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---------- 357

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                 ++ P+  ++  +IN      +LD A  +F  M    C  NV  Y+ LI G C +
Sbjct: 358 ------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R+EE  EL REM + G      T  ++     + +D   A  + ++M   G  P +   
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 433 TLLIKELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +L+  LCK+GK   AM  F +L     E   PDI  Y+  I G+    +V+   ELF +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKVEDGWELFCN 528

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P+V+AYN +ISG C+     EA+ L  +M   G +P+  TYN LI    + G+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            + +   +  M  +  G     +   L+  +   GR D + +
Sbjct: 589 REASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFL 628



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 170/408 (41%), Gaps = 69/408 (16%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+ N L    K+D A+ LF +M +     ++  +N L+  +   N+ E    L  +M+ 
Sbjct: 52  EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G     +T +    C CRR  +  AL ++ KM   G+EP +   + L+   C   +  +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD--------- 498
           A   +  MV+ G+ PD   ++  I GL    +   A+ L   +   GC PD         
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 499 --------------------------VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
                                     VV YN II GLCK + + +A +LF EM  KG+ P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLE------------------------------ 562
            V TY+ LI+  C  G    A   LS M+E                              
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351

Query: 563 ----KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
               K S  PD+ TY++LI+G C+  R D+A  ++  M  K C PN +T+  LI G CK 
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R    +  FR M ++G+  +   +  LI  F    +   A  V K+M
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 277/563 (49%), Gaps = 28/563 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  +YN +L +LC    +D        ++      D  T + L+       + D AL 
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           + +E+   G   + V ++ LL    K GE +K   + +++  D   R N  T+ V++ G 
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  +  +++++M  +    D   Y ++I GLC++  ++ A ++YSE+  +G+  D 
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + + L+      G     V+E W+  D      L N             + YN+   MI
Sbjct: 335 AMYNSLVKGFCQAGR----VQEAWKFWDSAGFAGLRNL------------RTYNI---MI 375

Query: 301 KG---EPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           KG     + D  +E+  + +  V+  P+T +F  +I+ L ++G  + A ++F E    G 
Sbjct: 376 KGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +VF Y+++I+GLCN  RL ++ ++  +M++ G KP     N++    C+      A+ 
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  KM   G  P V     LI  LCK  K  EA     +MV+ GF PDI  Y + I GL 
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI-TKGLIPSV 534
             K++D AL +++ I   G   DV+ +NI+I GLC A +V EA  +F++M   K   P++
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN L++G  ++G ID+A    + + E +   PD+I+Y T I GLC   R  + I L +
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITE-DGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 595 EMEEKGCAPNRITFMALITGLCK 617
           E+  +G  P  IT+  L+  + K
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIK 697



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 270/580 (46%), Gaps = 43/580 (7%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV------FSILLVAFSKWGEVDKACELIER 160
           LL  +  + +F  A + F  +  HG     +      ++I+L +    G++D+A  L + 
Sbjct: 125 LLDAFVRARRFSDADAFFASL-SHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDS 183

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           +    +  +  T+  L+ G  K+ R+D AL L D+M +SG   D   Y+ ++GG  K  +
Sbjct: 184 LRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGE 243

Query: 221 LEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTM 272
            E  ++++ ++ K  G  P+    + ++      G     V E+WE         DV T 
Sbjct: 244 FEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE-VGEVWERMVANNLQPDVITY 302

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI----------------- 315
            +L + + R    +G +D A  +   +IK   + D  +   ++                 
Sbjct: 303 GILIHGLCR----SGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD 358

Query: 316 ---FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
              F G    N  +++I+I  L   G +D A+ L+  + + + C+ +   +  LI GLC 
Sbjct: 359 SAGFAGLR--NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQ 416

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +    +++ +  E   SG +   F+ +SM   LC    +V A+ +  KM   G +P    
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHI 476

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI   C+  +  +A R  + M   G  P ++ Y+  I GL   ++   A  + R++ 
Sbjct: 477 YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +G  PD+  Y  +I GL   +++ +A  ++ +++ KGL   V  +N+LI+G C +G +D
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A+   S M EK++  P+++TY TL+DGL   G  D A  LW  + E G  P+ I++   
Sbjct: 597 EALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTR 656

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           I GLC CDR    +     +  +G+ P +  +  L+ A +
Sbjct: 657 IKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVI 696



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 287/576 (49%), Gaps = 37/576 (6%)

Query: 7   RARRI----APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           RARR     A    L+      R   +      ++R L + G ++ A  LFD ++R  + 
Sbjct: 131 RARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQV- 189

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +Y+ L+  L K   +D     L EM   G   D      LL     +G+F+K + 
Sbjct: 190 APDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR 249

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           V+++++       ++  ++++L    K+G   +  E+ ERM   N++ +  T+ +LIHG 
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +   VD A +++ ++ K+G   DAAMY+ ++ G C+  +++ A + +     +G+  + 
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTM--TLLCNSIMRILVSNGSIDQAYNLL 296
              + +I    D G +   + E+W+  ++DV  +  T+   +++  L  NG  ++A+ + 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAI-ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 297 Q---------------AMIKGEPIADVG--VEMLMIF----KGTVSPNTSSFDIIINTLL 335
           +               +MI G  + +VG  V+ + ++    K    PN+  ++ +I+   
Sbjct: 428 EEARVSGKQLDVFSYSSMING--LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +  +   A+ ++ +M   GC   V  YN LIDGLC + + +E+  + REM E+GF P   
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  S+ R L   + +  AL++ +++  +G +  V  + +LI  LC  GK  EA    +DM
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 456 VQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            ++    P++V Y+  + GL +   +D A  L+  I   G  PD+++YN  I GLC   R
Sbjct: 606 KEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDR 665

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
           + E   L +E++++G+IP+V T+N+L+    K G I
Sbjct: 666 IHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 231/539 (42%), Gaps = 68/539 (12%)

Query: 140 ILLVAFSKWGEVDKACELIERMDD---CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++L AFS+    D A +    +     CN  +  ++   L+  FV+  R   A   F  +
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGI--RSHNALLDAFVRARRFSDADAFFASL 145

Query: 197 TKSGF----ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +   F    A +   Y++++  LC    L+ A+ L+  ++   + PD          C  
Sbjct: 146 SHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD----------C-- 193

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                           +   TL+C      L     +D A +LL  M +           
Sbjct: 194 ----------------ITYSTLMCG-----LAKQDRLDHALDLLDEMPRS---------- 222

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
                  V P+   ++ ++    K G+ +  + ++ ++ +  G   N+  YN ++DGLC 
Sbjct: 223 ------GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             R +E  E+   M  +  +P   T   +   LCR  DV GA  +  ++   G       
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF---- 487
              L+K  C+ G+  EA++F  D      L ++  Y+  I GL D   VD A+EL+    
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           +D+    C PD V +  +I GLC+     +A  +F E    G    V +Y+ +ING C  
Sbjct: 396 KDV---ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G +  A+    +M +K+   P+   Y  LI G C   R  DA+ ++++M + GC+P  IT
Sbjct: 453 GRLVDAVKVYEKM-DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  LI GLCK ++ + A    R M E G  PD+  + +LI    S+     A  + K++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/558 (29%), Positives = 252/558 (45%), Gaps = 68/558 (12%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+ +D ++   LL +   SG   +   V+ +++  G     V F IL+    K G+  +A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E +  +D+ ++  +   F  LIHG  K    D+A++LF+ M  S    D   Y+ +I G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 215 LCKNKQLEMALQLYSEM--KGSGITPDFEILSKLITS--CSDEGELTLLVKEIWEDRDVN 270
           LCK+  LE A +L  EM  +G    PD    + LI +  C D                  
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD------------------ 183

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                           G +++A  +L  M    P                +P+  +++ I
Sbjct: 184 ----------------GDVEEALEILDGMKLAGP----------------APDVITYNSI 211

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L   G++  A  + + M+   C  ++  +N L+DG C +  L  + E+L EM     
Sbjct: 212 IHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 268

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG------- 443
            P   T   +   LCR   V  A  L+ ++  QG+ P V   T L+  LCK G       
Sbjct: 269 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328

Query: 444 --KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             K M A   L +MV    +P +  Y+  +GGLI    +  A+ L  D+ A G  PDVV 
Sbjct: 329 LVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 388

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I GLCKA RV EA DL +EM + G  P+  T   ++ G C+ G +D A   +  M 
Sbjct: 389 YNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 448

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K   +P+V+ YT+LIDGLC + R DDA ++ + M  +G A +   +  LI  +    R 
Sbjct: 449 RKRH-APNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRV 507

Query: 622 RAALVHFRMMKEKGMKPD 639
             A+  +  M  +G  PD
Sbjct: 508 AEAMAMYDEMVARGFLPD 525



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 245/500 (49%), Gaps = 32/500 (6%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            VK     +  +++  +  SG + +   + ++I G CK  Q   AL+    +    + PD
Sbjct: 37  LVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPD 96

Query: 240 FEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             I + LI     +G     VK  E  E   VN      N+++  L  +G++++A  LL+
Sbjct: 97  VYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLE 156

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT-LLKDGKLDLALSLFREMTQIGCM 356
            MI+                G  +P+  +++ +IN  + KDG ++ AL +   M   G  
Sbjct: 157 EMIRR--------------GGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPA 202

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN++I  LC + R+ E+ E+L+ M  S   P   T N++    C+   +  AL +
Sbjct: 203 PDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEV 259

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + +M  +   P V   T+L+  LC+ G+   AF  L ++V++G++PD++ Y++ + GL  
Sbjct: 260 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 319

Query: 477 IKRVDLALELFRDICAH---------GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
              ++ A +L +++ A             P +  YNI++ GL K   +++A  L ++++ 
Sbjct: 320 SGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 379

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLC-LSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           +G +P V TYN LI+G CK+  + +A  C L+  +      P+ +T  +++ GLC  GR 
Sbjct: 380 RGYVPDVVTYNTLIDGLCKANRVREA--CDLADEMASLGCFPNDVTLGSVVFGLCRVGRV 437

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           DDA  L  EM  K  APN + + +LI GLCK DR   A V    M+ +G+  D F +  L
Sbjct: 438 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKL 497

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I + +       A  +  EM
Sbjct: 498 IVSMIHGGRVAEAMAMYDEM 517



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 218/468 (46%), Gaps = 48/468 (10%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FLI  L   G  ++A  LF+ ++   +  P+ ++YN ++  LCKS +++     L+EM  
Sbjct: 102 FLIHGLFKDGNPDQAVKLFENMESSRVN-PDIFTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 95  YGW--GYDKYTLTPLLQV-YCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
            G     D  T   L+    C  G  ++AL + + +   G   D   ++ ++ A    G 
Sbjct: 161 RGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGR 220

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A E+++ M  C+  L   TF  L+ GF K   + +AL++ ++M +     D   Y +
Sbjct: 221 VVEAAEILKTMS-CSPDL--VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 277

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ GLC+  Q+++A  L  E+   G  PD    + L+                       
Sbjct: 278 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG--------------------- 316

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
               LC S        G I++A+ L++ M   E +A    EM+ I    + P   +++I+
Sbjct: 317 ----LCKS--------GEIEEAHKLVKEMSAREILA----EMVSI---NMVPPLFTYNIV 357

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +  L+KDG +  A+SL  ++   G + +V  YN LIDGLC +NR+ E+ +L  EM   G 
Sbjct: 358 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   TL S+   LCR   V  A +LV +M  + H P V   T LI  LCK  +  +A  
Sbjct: 418 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACV 477

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            L  M  +G   D   Y   I  +I   RV  A+ ++ ++ A G  PD
Sbjct: 478 VLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 158/335 (47%), Gaps = 8/335 (2%)

Query: 336 KDGKLDLALSLFR-EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           +  + DLA+  F     Q G   +V  YN+L+D L  S     + ++ +++  SG  P  
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   + R  C+      AL  +R +      P V     LI  L K G   +A +   +
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG--CCPDVVAYNIII-SGLCK 511
           M      PDI  Y+  I GL     ++ A EL  ++   G    PD+V YN +I +G+CK
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              V EA ++ + M   G  P V TYN +I+  C +G + +A    + +L+  S SPD++
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA----AEILKTMSCSPDLV 238

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           T+ TL+DG C AG    A+ +  EM  +   P+ IT+  L+ GLC+  + + A      +
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +G  PD+  + +L+           A +++KEM
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 333


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 285/619 (46%), Gaps = 58/619 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +R G  V + ++YN L+   C+   +D     +  M   
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARRLIASMP-- 140

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TP+++  C+ G+  +ALS+ ++++  G     V +++LL A  K     +A
Sbjct: 141 -VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+++ M       N  T+ V+I+G  ++ RVD A +  ++++  GF  D   Y  ++ G
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC  K+ E   +L++EM      P+               E+T                 
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPN---------------EVTF---------------- 288

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +L+ M  G   A                NT+  +I+INT+
Sbjct: 289 --DMLVRFFCRGGMVERAIQVLEQM-SGHGCA---------------ANTTLCNIVINTI 330

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R E++ ELL+EM      P  
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++  +  A  L+ +M   G E  +     L+   C  G+   A      
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M  +   P+ + Y+  + GL + +R+D A EL  ++    C P+VV +N+++S  C+   
Sbjct: 451 MPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA +L  +M+  G  P++ TYN L++G  K  N ++A+  L  ++     SPD++TY+
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN-GVSPDIVTYS 566

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           ++I  L    R ++AI +++ +++ G  P  + +  ++  LCK      A+  F  M   
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P+   ++ LI    +E
Sbjct: 627 GCMPNELTYITLIEGLANE 645



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 230/490 (46%), Gaps = 25/490 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI    ++ R   A ++     +SG A D   Y+ ++ G C+  QL+ A +L + M    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD    + +I    D G            R    ++LL + + R      S+     L
Sbjct: 141 VAPDAYTYTPIIRGLCDRG------------RVGEALSLLDDMLHR--GCQPSVVTYTVL 186

Query: 296 LQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L+A+ K        +E+L  M  KG  +PN  ++++IIN + ++G++D A      ++  
Sbjct: 187 LEAVCKSTGFGQ-AMEVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +   Y  ++ GLC + R E+  EL  EM E    P   T + + R  CR   V  A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           + ++ +M   G         ++I  +CK G+  +AF+FL +M   G  PD + Y+  + G
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L   +R + A EL +++    C P+ V +N  I  LC+   + +A  L  +M   G   +
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TYN L+NG+C  G +D A+     M  K    P+ ITYTTL+ GLC A R D A  L 
Sbjct: 425 IVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELL 480

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM +K CAPN +TF  L++  C+      A+     M E G  P++  +  L+     +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540

Query: 654 LNPPLAFEVL 663
            N   A E+L
Sbjct: 541 CNSEEALELL 550



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 192/426 (45%), Gaps = 57/426 (13%)

Query: 277 NSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           N+ +R L++   + +A  L+ +A  +GE                 +P+      +I  L 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGE-----------------APDVYLCTKLIRNLC 89

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G+   A  + R   + G   +VF YN L+ G C   +L+ +  L+  M      P  +
Sbjct: 90  RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAY 146

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T   + R LC R  V  AL+L+  M  +G +P V   T+L++ +CK     +A   L +M
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             +G  P+IV Y+  I G+    RVD A E    + ++G  PD V+Y  ++ GLC A+R 
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 516 AEAEDLFNEMITKGLIPSVATY-----------------------------------NLL 540
            + E+LF EM+ K  +P+  T+                                   N++
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           IN  CK G +D A   L+ M      SPD I+YTT++ GLC A R +DA  L  EM  K 
Sbjct: 327 INTICKQGRVDDAFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C PN +TF   I  LC+      A +    M E G + ++  + AL++ F  +     A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 661 EVLKEM 666
           E+   M
Sbjct: 446 ELFYSM 451



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 26/407 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++++  C  +      L+R     G+VE A  + +Q+   G C  
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-CAA 318

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++  +CK   VD     L  M  YG   D  + T +L+  C + +++ A  + 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++      +E  F+  +    + G +++A  LIE+M +    +N  T+  L++GF  +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD AL+LF  M       +   Y  ++ GLC  ++L+ A +L +EM      P+    
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 244 SKLITSCSDEG---ELTLLVKEIWE----------DRDVNTMTLLCNS-----IMRILVS 285
           + L++    +G   E   LV+++ E          +  ++ +T  CNS     ++  LVS
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555

Query: 286 NG-SID-QAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDL 342
           NG S D   Y+ +  ++  E   +  ++M  I +   + P    ++ I+  L K    D 
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           A+  F  M   GCM N   Y  LI+GL N + L+E+ +LLRE+   G
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 294/632 (46%), Gaps = 93/632 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +R G  V + ++YN L+   C+   +D     +  M   
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARRLIASMP-- 171

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TP+++  C+ G+  +ALS+ ++++  G     V +++LL A  K     +A
Sbjct: 172 -VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 230

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+++ M       N  T+ V+I+G  ++ RVD A +  ++++  GF  D   Y  ++ G
Sbjct: 231 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 290

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC  K+ E   +L++EM      P+               E+T                 
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPN---------------EVTF---------------- 319

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +L+ M  G   A                NT+  +I+INT+
Sbjct: 320 --DMLVRFFCRGGMVERAIQVLEQM-SGHGCA---------------ANTTLCNIVINTI 361

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R E++ ELL+EM      P  
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++                     ++  T+LI+++ +HG  +        
Sbjct: 422 VTFNTFICILCQKG-------------------LIEQATMLIEQMSEHGCEV-------- 454

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
                   +IV Y+A + G     RVD ALELF  +    C P+ + Y  +++GLC A+R
Sbjct: 455 --------NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 503

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A +L  EM+ K   P+V T+N+L++ +C+ G +D+A+  + +M+E    +P++ITY 
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME-HGCTPNLITYN 562

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TL+DG+      ++A+ L + +   G +P+ +T+ ++I  L + DR   A+  F ++++ 
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GM+P   ++  ++ A     N   A +    M
Sbjct: 623 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 654



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 26/407 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++++  C  +      L+R     G+VE A  + +Q+   G C  
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-CAA 349

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++  +CK   VD     L  M  YG   D  + T +L+  C + +++ A  + 
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++      +E  F+  +    + G +++A  LIE+M +    +N  T+  L++GF  +
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD AL+LF  M       +   Y  ++ GLC  ++L+ A +L +EM      P+    
Sbjct: 470 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 526

Query: 244 SKLITSCSDEG---ELTLLVKEIWE----------DRDVNTMTLLCNS-----IMRILVS 285
           + L++    +G   E   LV+++ E          +  ++ +T  CNS     ++  LVS
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586

Query: 286 NG-SID-QAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDL 342
           NG S D   Y+ +  ++  E   +  ++M  I +   + P    ++ I+  L K    D 
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 646

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           A+  F  M   GCM N   Y  LI+GL N + L+E+ +LLRE+   G
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 4/171 (2%)

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L     + G  PDV     +I  LC+  R ++A  +       G    V  YN L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+C+ G +D A     R++     +PD  TYT +I GLC  GR  +A+ L ++M  +GC 
Sbjct: 153 GYCRYGQLDAA----RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P+ +T+  L+  +CK      A+     M+ KG  P++  +  +I+    E
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/628 (26%), Positives = 294/628 (46%), Gaps = 45/628 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN L++   ++  +D  ++  +EM + G   D++TL    Q  C  G++ +ALS+
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL 298

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              I    +V   + ++ ++    +    ++A + + RM   +   N +T+ +L+ G + 
Sbjct: 299 ---IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++   M   G      +++ ++   CK+     A +L  +M+     P + +
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTM----TLLCN----SIMRILVSNGSIDQAYN 294
            + LI S    GEL   V     ++  N M    T+L      S  R L   G  ++AY 
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++  M+                 G V P+TS++  +I  L    +++ A  LF+EM   G
Sbjct: 476 VIHEMMGN---------------GFV-PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  LID    +  +++++  L EM   G +PT  T  ++     + + V  A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD----------- 463
            L   M  +G  P V   T LI   CK G   +A +    M  +  +PD           
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 464 -----IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                +V Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CKA ++ EA
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++F++M+  G  P+V TY+ LI+   K   +D  +  LS+MLE  S +P+++ YT +ID
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAPNIVIYTEMID 758

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL    + D+A  L   MEEKGC PN +T+ A+I G  K  +    L  FR M  KG  P
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  LI+   +  +   A+ +L+EM
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 276/627 (44%), Gaps = 55/627 (8%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+   C++   ++    L  ++D+G+   + T   L+QV+  + + D A  V  E+ +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  +DE        A  K G+  +A  LIE+ D      N   +  +I G  + S  ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKED---FVPNTILYNKMISGLCEASFFEE 326

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+   ++M  +    +   Y +++ G    KQL    ++ S M   G  P + I + L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIA 306
           +     + +   K             L   + +     G +   YN+L   I   GE   
Sbjct: 387 AYCKSDDFSYAYK-------------LLKKMEKCECKPGYV--VYNILIGSICSGGELPG 431

Query: 307 DVGVEML------MIFKGTV--SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
            V  E+       M+  GTV    N  SF      L   GK + A  +  EM   G + +
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSF---ARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y+ +I  LCN++R+E ++ L +EM+ +G  P  +T   +  C  +   +  A N + 
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL---- 474
           +M   G EP V   T LI    K  K   A      M+ +G  P+++ Y+A I G     
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 475 ---------------IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                           DI  VD+  ++  ++      P+VV Y  ++ GLCKA +V +A 
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK---PNVVTYGALVDGLCKAHKVKDAR 665

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DL   M   G  P+   Y+ LI+G+CK+  +D+A     +M+E    +P+V TY++LID 
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE-HGYNPNVYTYSSLIDR 724

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L    R D  + + ++M E  CAPN + +  +I GL K  +   A     MM+EKG KP+
Sbjct: 725 LFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPN 784

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  + A+I  F          E+ +EM
Sbjct: 785 VVTYTAMIDGFGKAGKVDKCLELFREM 811



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 190/733 (25%), Positives = 311/733 (42%), Gaps = 132/733 (18%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +  +  RA ++   +++ +++ +    M    LGF  + L  VG   EA  L   +++E 
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSL---IEKED 303

Query: 61  LCVPNNYSYNCLLEALCKSCSVD-----LVEMR----LKEMQDY---------------- 95
             VPN   YN ++  LC++   +     L  MR    +  +Q Y                
Sbjct: 304 F-VPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362

Query: 96  --------GWG-YDKYTL-TPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSIL 141
                     G Y  YT+   L+  YC S  F  A  +  ++       G+V   V++IL
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV---VYNIL 419

Query: 142 LVAFSKWGEVDKAC--ELIERMDDCNI-------RLNEKTFCVLIHGFVKKSRVDKALQL 192
           + +    GE+      EL E+  +  +       ++N  +F   + GF    + +KA ++
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKV 476

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M  +GF  D + Y  +IG LC   ++E A  L+ EMKG+G+ P              
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP-------------- 522

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                          DV T T+L +   +     G I QA+N L  M++       G E 
Sbjct: 523 ---------------DVYTYTILIDCFSKA----GIIKQAHNWLDEMVRD------GCE- 556

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    P   ++  +I+  LK  K+ +A  LF  M   GC  NV  Y  LIDG C S
Sbjct: 557 ---------PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607

Query: 373 NRLEESYELLREME----------------ESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +E++ ++   M                     KP   T  ++   LC+   V  A +L
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M V G EP       LI   CK  K  EA      MV+ G+ P++  YS+ I  L  
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFK 727

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            KR+DL L++   +  + C P++V Y  +I GL K  +  EA  L   M  KG  P+V T
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  +I+G+ K+G +D+  L L R +  +  +P+ +TYT LI+  C  G  D+A  L  EM
Sbjct: 788 YTAMIDGFGKAGKVDKC-LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE---KGMKPDMFVFVALISAFLSE 653
           ++     +  ++  +I G       R  ++   +++E    G  P + ++  LI  F+  
Sbjct: 847 KQTYWPKHVSSYCKVIEGY-----KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKA 901

Query: 654 LNPPLAFEVLKEM 666
               +A E+ KE+
Sbjct: 902 GRLEVALELHKEV 914



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 177/667 (26%), Positives = 293/667 (43%), Gaps = 68/667 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L      EEA M F    R   C+PN  +Y  LL        +   +  L  M   
Sbjct: 314 MISGLCEASFFEEA-MDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAE 372

Query: 96  GWGYDKYTL-TPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVAFSKWGE 150
           G  Y  YT+   L+  YC S  F  A  +  ++       G+V   V++IL+ +    GE
Sbjct: 373 GC-YPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV---VYNILIGSICSGGE 428

Query: 151 VDKAC--ELIERMDDCNI-------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +      EL E+  +  +       ++N  +F   + GF    + +KA ++  +M  +GF
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGF 485

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------- 254
             D + Y  +IG LC   ++E A  L+ EMKG+G+ PD    + LI   S  G       
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 255 ELTLLVKEIWEDRDVNTMTLL-----------CNSIMRILVS------------------ 285
            L  +V++  E   V   TL+            N +  ++++                  
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 286 -NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDL 342
            +G+I++A  +   M     I DV  +M    K  V+  PN  ++  +++ L K  K+  
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDV--DMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L   M   GC  N  +Y+ LIDG C + +L+E+ E+  +M E G+ P  +T +S+  
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L + + +   L ++ KM      P +   T +I  L K  K  EA++ +  M ++G  P
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKP 783

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++V Y+A I G     +VD  LELFR++ + GC P+ V Y ++I+  C    + EA  L 
Sbjct: 784 NVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM        V++Y  +I G+ +   +   +L     +EK   +P ++ Y  LID    
Sbjct: 844 EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLL---EEVEKNGSAPIILLYKVLIDNFVK 900

Query: 583 AGRPDDAIMLWNEM--EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           AGR + A+ L  E+       A  +  + +LI       +   A   F  M   G+ PD+
Sbjct: 901 AGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 960

Query: 641 FVFVALI 647
             FV L+
Sbjct: 961 GTFVHLL 967



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 178/742 (23%), Positives = 295/742 (39%), Gaps = 142/742 (19%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGFL--------------IRCLGSVGLVEEANMLFDQV 56
           + P + L+ D  + +CF SP  +  L               R L +V +  EA ++ D V
Sbjct: 56  VDPDQSLSSDTSRVQCF-SPQEVSLLRDSLLDSHADSCSSHRTLQTVKISNEAFLILDAV 114

Query: 57  KR--EGLCVPNNYSYNCLLEALCKSCSVDL----------VEMRLKEMQDYGWGYDKYTL 104
           +   +G     +       + L     V++          V+  L   +  G+ +     
Sbjct: 115 RNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVY 174

Query: 105 TPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
             LL V+   G +D+    F   I  D   V   + ++L+    + G  + A E + R+ 
Sbjct: 175 IALLDVF-ERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLK 233

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D   +    T+  L+  F++  ++D A  +  +M++ G + D          LCK  +  
Sbjct: 234 DFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWR 293

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL L                                     E  D    T+L N ++  
Sbjct: 294 EALSLI------------------------------------EKEDFVPNTILYNKMISG 317

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L      ++A + L  M     I                PN  ++ I++   L   +L  
Sbjct: 318 LCEASFFEEAMDFLNRMRSTSCI----------------PNVQTYRILLCGCLNKKQLGR 361

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
              +   M   GC  +  ++N+L+   C S+    +Y+LL++ME+   KP +   N +  
Sbjct: 362 CKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG 421

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE--------LCKHGKAMEAFRFLTD 454
            +C   ++ G +    ++  + +   +   T+L K         LC  GK  +A++ + +
Sbjct: 422 SICSGGELPGPVTF--ELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHE 479

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-----------------C------ 491
           M+  GF+PD   YS  IG L +  RV+ A  LF+++                 C      
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539

Query: 492 ---AH---------GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              AH         GC P VV Y  +I    KA++V+ A +LF  MI KG  P+V TY  
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 540 LINGWCKSGNIDQAMLCLSRML---------------EKESGSPDVITYTTLIDGLCIAG 584
           LI+G+CKSGNI++A    +RM                   +  P+V+TY  L+DGLC A 
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +  DA  L   M   GC PN I + ALI G CK  +   A   F  M E G  P+++ + 
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYS 719

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           +LI     +    L  +VL +M
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKM 741



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 230/522 (44%), Gaps = 74/522 (14%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
           + EM   G+  D  T + ++   CN+ + + A  +F E+   G V D + ++IL+  FSK
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536

Query: 148 WGEVDKACELIERM--DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            G + +A   ++ M  D C   +   T+  LIH ++K  +V  A +LF+ M   G   + 
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTV--VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL------ 259
             Y  +I G CK+  +E A Q+Y+ M+G    PD ++  K+  + +++  +         
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654

Query: 260 ---VKEIWEDRDV-NTM--------TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                ++ + RD+  TM        T++ ++++        +D+A  +   M++      
Sbjct: 655 LCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH----- 709

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                        +PN  ++  +I+ L KD +LDL L +  +M +  C  N+ +Y  +ID
Sbjct: 710 -----------GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMID 758

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GL    + +E+Y+L+  MEE G KP   T  +M     +   V   L L R+M  +G  P
Sbjct: 759 GLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQ--------------EGF------------- 460
                T+LI   C  G   EA+  L +M Q              EG+             
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEE 878

Query: 461 ------LPDIVCYSAAIGGLIDIKRVDLALELFRDI--CAHGCCPDVVAYNIIISGLCKA 512
                  P I+ Y   I   +   R+++ALEL +++   +         Y  +I     A
Sbjct: 879 VEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYA 938

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
            ++  A +LF +MI  G+IP + T+  L+ G  +    ++A+
Sbjct: 939 SKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 220/506 (43%), Gaps = 50/506 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE A  LF ++K  G+ VP+ Y+Y  L++   K+  +      L EM   G      T T
Sbjct: 505 VENAFFLFKEMKGTGV-VPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM-DD 163
            L+  Y  + +   A  +F  +I  G + +   ++ L+  + K G ++KAC++  RM  D
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 164 CNI---------------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            +I               + N  T+  L+ G  K  +V  A  L + M   G   +  +Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D +I G CK  +L+ A +++ +M   G  P+    S LI     +  L L++K + +  +
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  ++   ++  L      D+AY L                MLM+ +    PN  +
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKL----------------MLMMEEKGCKPNVVT 787

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K GK+D  L LFREM   GC  N   Y  LI+  C +  L+E+Y LL EM+
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847

Query: 387 ESGFKPTHFTLNSMFRCLCR-----RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           ++ + P H +        C+     +++ + +L L+ ++   G  P +    +LI    K
Sbjct: 848 QT-YWPKHVS------SYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVK 900

Query: 442 HGKAMEAFRFLTDMVQEGF--LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            G+   A     +++            Y++ I       ++  A ELF D+   G  PD+
Sbjct: 901 AGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 960

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  ++ GL + +R  EA  L + +
Sbjct: 961 GTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 277/563 (49%), Gaps = 28/563 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  +YN +L +LC    +D        ++      D+ T + L+       + D AL 
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALD 214

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           + +E+       + V ++ LL    K GE +K   + +++  D   R N  T+ V++ G 
Sbjct: 215 LLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  +  +++++M  +    D   Y ++I GLC++  ++ A ++YSE+  +G+  D 
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + + L+      G     V+E W+  D      L N             + YN+   MI
Sbjct: 335 AMYNSLVKGFCQAGR----VQEAWKFWDSAGFAGLRNL------------RTYNI---MI 375

Query: 301 KG---EPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           KG     + D  +E+  + +  V+  P+T +F  +I+ L ++G  + A ++F E    G 
Sbjct: 376 KGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +VF Y+++I+GLCN  RL ++ ++  +M++ G KP     N++    C+      A+ 
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  KM   G  P V     LI  LCK  K  EA     +MV+ GF PDI  Y + I GL 
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI-TKGLIPSV 534
             K++D AL +++ I   G   DV+ +NI+I GLC A +V EA  +F++M   K   P++
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN L++G  ++G ID+A    + + E +   PD+I+Y T I GLC   R  + I L +
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITE-DGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 595 EMEEKGCAPNRITFMALITGLCK 617
           E+  +G  P  IT+  L+  + K
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIK 697



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/602 (24%), Positives = 277/602 (46%), Gaps = 32/602 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY-------CNS 114
           C P   S+N LL+A  ++      +     +    +G     + P LQ Y       C  
Sbjct: 115 CNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGR---RIAPNLQTYNIVLRSLCAR 171

Query: 115 GQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G  D+A+++F+ +       + + +S L+   +K   +D A +L++ M    ++ +   +
Sbjct: 172 GDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCY 231

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
             L+ G  K    +K ++++DK+ K  G   + A Y+V++ GLCK  + +   +++  M 
Sbjct: 232 NALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMV 291

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSID 290
            + + PD      LI      G++    +   E      +    + NS+++     G + 
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQ 351

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A+    +          G   L         N  +++I+I  L   G +D A+ L+  +
Sbjct: 352 EAWKFWDS---------AGFAGLR--------NLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 351 TQ-IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
            + + C+ +   +  LI GLC +    +++ +  E   SG +   F+ +SM   LC    
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +V A+ +  KM   G +P       LI   C+  +  +A R  + M   G  P ++ Y+ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL   ++   A  + R++  +G  PD+  Y  +I GL   +++ +A  ++ +++ KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L   V  +N+LI+G C +G +D+A+   S M EK++  P+++TY TL+DGL   G  D A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             LW  + E G  P+ I++   I GLC CDR    +     +  +G+ P +  +  L+ A
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 650 FL 651
            +
Sbjct: 695 VI 696



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 286/576 (49%), Gaps = 37/576 (6%)

Query: 7   RARRI----APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           RARR     A    L+      R   +      ++R L + G ++ A  LFD ++R  + 
Sbjct: 131 RARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVA 190

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +Y+ L+  L K   +D     L EM       D      LL     +G+F+K + 
Sbjct: 191 -PDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMR 249

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           V+++++       ++  ++++L    K+G   +  E+ ERM   N++ +  T+ +LIHG 
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +   VD A +++ ++ K+G   DAAMY+ ++ G C+  +++ A + +     +G+  + 
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTM--TLLCNSIMRILVSNGSIDQAYNLL 296
              + +I    D G +   + E+W+  ++DV  +  T+   +++  L  NG  ++A+ + 
Sbjct: 369 RTYNIMIKGLFDSGMVDEAI-ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 297 Q---------------AMIKGEPIADVG--VEMLMIF----KGTVSPNTSSFDIIINTLL 335
           +               +MI G  + +VG  V+ + ++    K    PN+  ++ +I+   
Sbjct: 428 EEARVSGKQLDVFSYSSMING--LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +  +   A+ ++ +M   GC   V  YN LIDGLC + + +E+  + REM E+GF P   
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  S+ R L   + +  AL++ +++  +G +  V  + +LI  LC  GK  EA    +DM
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 456 VQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            ++    P++V Y+  + GL +   +D A  L+  I   G  PD+++YN  I GLC   R
Sbjct: 606 KEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDR 665

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
           + E   L +E++++G+IP+V T+N+L+    K G I
Sbjct: 666 IHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 230/539 (42%), Gaps = 68/539 (12%)

Query: 140 ILLVAFSKWGEVDKACELIERMDD---CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++L AFS+    D A +    +     CN  +  ++   L+  FV+  R   A   F  +
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGI--RSHNALLDAFVRARRFSDADAFFASL 145

Query: 197 TKSGF----ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +   F    A +   Y++++  LC    L+ A+ L+  ++   + PD             
Sbjct: 146 SHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD------------- 192

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                           +   TL+C      L     +D A +LL  M +           
Sbjct: 193 ---------------RITYSTLMCG-----LAKQDRLDHALDLLDEMPRSR--------- 223

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
                  V P+   ++ ++    K G+ +  + ++ ++ +  G   N+  YN ++DGLC 
Sbjct: 224 -------VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             R +E  E+   M  +  +P   T   +   LCR  DV GA  +  ++   G       
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF---- 487
              L+K  C+ G+  EA++F  D      L ++  Y+  I GL D   VD A+EL+    
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           +D+    C PD V +  +I GLC+     +A  +F E    G    V +Y+ +ING C  
Sbjct: 396 KDV---ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G +  A+    +M +K+   P+   Y  LI G C   R  DA+ ++++M + GC+P  IT
Sbjct: 453 GRLVDAVKVYEKM-DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  LI GLCK ++ + A    R M E G  PD+  + +LI    S+     A  + K++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 270/573 (47%), Gaps = 23/573 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YS N L+  LC+   VD       +M   G   D  T T L+   CN G+   A+ ++NE
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++  G   + + ++ L+      G  + A  + ++M+    + N  T+  +I    K   
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V+ A+    +M   G   DA  Y+ I+ GLC   QL  A +L+  M+ +G  PD    + 
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308

Query: 246 LITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           +I S   +  +      + E  D+ +    +   +I+  L   G +++A  L + M +  
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ-- 366

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        KG   P+  +++ II++L KD  ++ A+    EM   G   N   Y+
Sbjct: 367 -------------KG-CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYS 412

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            ++ G CN  +L+E+ +L +EM      P   T + +   LC+   V  A  +   M  +
Sbjct: 413 TILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK 472

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G EP +     L+   C   K  EA +    MV +G  PD+  Y+  I G  + +R+D A
Sbjct: 473 GVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKA 532

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             L   +      P+ V YN I+ GLC   R+ +A++LF +M + G++P++ TY++L+NG
Sbjct: 533 KALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNG 592

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK G++D+A+     M EK+   PD+I YT LI+G+ I G+ + A  L++++   G  P
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKL-EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651

Query: 604 NRITFMALITGLCK---CDRPRAALVHFRMMKE 633
              T+  +I GL K    D        ++MMK 
Sbjct: 652 PGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKH 684



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 267/545 (48%), Gaps = 32/545 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           Q+   + + N++ D   V   V+S  IL+    +   VD A  +  +M    I+ +  TF
Sbjct: 108 QYSTVVYLCNQM-DLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITF 166

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI+G   + ++  A++L+++M +SG   D   Y+ +I GLC +    MA+ ++ +M+ 
Sbjct: 167 TTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ 226

Query: 234 SGITPDFEILSKLITS-CSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSN 286
           +G  P+    + +I S C D      LV +  +       R +    +  NSI+  L   
Sbjct: 227 NGCKPNVVTYNTIIDSLCKDR-----LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCL 281

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +++A  L + M +                    P+  +++III++L KD  ++ A   
Sbjct: 282 GQLNEATRLFKRMEQN----------------GCKPDVVTYNIIIDSLYKDRLVNDAADF 325

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             EM   G   +V  Y  ++ GLC   +L E+  L ++ME+ G KP     N++   LC+
Sbjct: 326 LSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK 385

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            + V  A+  + +M  +G  P     + ++   C  G+  EA +   +MV    +P+ + 
Sbjct: 386 DRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLT 445

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +S  + GL     V  A  +F  +   G  P++  YN +++G C   ++ EA  +F  M+
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            KG  P + +YN+LING+C S  +D+A   L++M  K+  +P+ +TY T++ GLC  GR 
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL-TPNTVTYNTIMKGLCYVGRL 564

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            DA  L+ +M   G  P  +T+  L+ GLCK      AL  F+ MKEK ++PD+ ++  L
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624

Query: 647 ISAFL 651
           I    
Sbjct: 625 IEGMF 629



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 237/502 (47%), Gaps = 52/502 (10%)

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VD A     RM   N R +   F   +    K  +    + L ++M   G        +
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           ++I  LC+   ++ A+ ++ +M   GI PD    + LI    +EG++ + V E++ +   
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAV-ELYNE--- 188

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                        +V +G                                  P+  S++ 
Sbjct: 189 -------------MVRSGH--------------------------------EPDVISYNT 203

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN L   G  ++A+ +F++M Q GC  NV  YN +ID LC    + ++ + L EM   G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T NS+   LC    +  A  L ++M   G +P V    ++I  L K     +A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
            FL++MV +G  PD+V Y+  + GL  + +++ A+ LF+ +   GC PDVVAYN II  L
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK + V +A +  +EM+ +G+ P+  TY+ +++G+C  G +D+A      M+ +    P+
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV-MPN 442

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHF 628
            +T++ L+DGLC  G   +A  ++  M EKG  PN  T+ AL+ G C +C    A  V F
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV-F 501

Query: 629 RMMKEKGMKPDMFVFVALISAF 650
            +M  KG  PD+  +  LI+ +
Sbjct: 502 EIMVGKGCAPDLHSYNILINGY 523



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 241/493 (48%), Gaps = 22/493 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L + G    A  +F ++++ G C PN  +YN ++++LCK   V+     L EM   
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNG-CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR 262

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   ++   C  GQ ++A  +F  +  +G   + V ++I++ +  K   V+ A
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            + +  M D  I  +  T+  ++HG     ++++A++LF KM + G   D   Y+ II  
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNT 271
           LCK++ +  A++  SEM   GI P+    S ++    + G+L   T L KE+   R+V  
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV-GRNVMP 441

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            TL  + ++  L   G + +A  + + M       + GVE          PN  +++ ++
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETM------TEKGVE----------PNIYTYNALM 485

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N      K++ A  +F  M   GC  ++  YN LI+G CNS R++++  LL +M      
Sbjct: 486 NGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLT 545

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N++ + LC    ++ A  L +KM   G  P +   ++L+  LCKHG   EA + 
Sbjct: 546 PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKL 605

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M ++   PDI+ Y+  I G+    ++++A  LF  + A G  P    YN++I GL K
Sbjct: 606 FKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLK 665

Query: 512 AQRVAEAEDLFNE 524
                EA +LF +
Sbjct: 666 EGLSDEAYELFRK 678



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 155/329 (47%), Gaps = 40/329 (12%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D AL+ F  M ++    ++  +   +  +    +      L  +M+  G   T ++LN 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  CLCR   V  A+++           W K                        M + G
Sbjct: 134 LINCLCRLNHVDFAVSV-----------WGK------------------------MFKLG 158

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD++ ++  I G+ +  ++ +A+EL+ ++   G  PDV++YN +I+GLC +     A 
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F +M   G  P+V TYN +I+  CK   ++ AM  LS M+ +    PD ITY +++ G
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR-GIPPDAITYNSIVHG 277

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+ ++A  L+  ME+ GC P+ +T+  +I  L K      A      M ++G+ PD
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337

Query: 640 MFVFVALISA--FLSELNPPLAFEVLKEM 666
           +  +  ++    +L +LN   A  + K+M
Sbjct: 338 VVTYTTILHGLCYLGQLNE--AIRLFKKM 364


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 294/632 (46%), Gaps = 93/632 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +R G  V + ++YN L+   C+   +D     +  M   
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAV-DVFAYNTLVAGYCRYGQLDAARRLIASMP-- 140

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TP+++  C+ G+  +ALS+ ++++  G     V +++LL A  K     +A
Sbjct: 141 -VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+++ M       N  T+ V+I+G  ++ RVD A +  ++++  GF  D   Y  ++ G
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC  K+ E   +L++EM      P+               E+T                 
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPN---------------EVTF---------------- 288

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +L+ M  G   A                NT+  +I+INT+
Sbjct: 289 --DMLVRFFCRGGMVERAIQVLEQM-SGHGCA---------------ANTTLCNIVINTI 330

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R E++ ELL+EM      P  
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++                     ++  T+LI+++ +HG  +        
Sbjct: 391 VTFNTFICILCQKG-------------------LIEQATMLIEQMSEHGCEV-------- 423

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
                   +IV Y+A + G     RVD ALELF  +    C P+ + Y  +++GLC A+R
Sbjct: 424 --------NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A +L  EM+ K   P+V T+N+L++ +C+ G +D+A+  + +M+E    +P++ITY 
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME-HGCTPNLITYN 531

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TL+DG+      ++A+ L + +   G +P+ +T+ ++I  L + DR   A+  F ++++ 
Sbjct: 532 TLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GM+P   ++  ++ A     N   A +    M
Sbjct: 592 GMRPKAVIYNKILLALCKRCNTDGAIDFFAYM 623



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 26/407 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++++  C  +      L+R     G+VE A  + +Q+   G C  
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-CAA 318

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++  +CK   VD     L  M  YG   D  + T +L+  C + +++ A  + 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++      +E  F+  +    + G +++A  LIE+M +    +N  T+  L++GF  +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD AL+LF  M       +   Y  ++ GLC  ++L+ A +L +EM      P+    
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 244 SKLITSCSDEG---ELTLLVKEIWE----------DRDVNTMTLLCNS-----IMRILVS 285
           + L++    +G   E   LV+++ E          +  ++ +T  CNS     ++  LVS
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555

Query: 286 NG-SID-QAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDL 342
           NG S D   Y+ +  ++  E   +  ++M  I +   + P    ++ I+  L K    D 
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           A+  F  M   GCM N   Y  LI+GL N + L+E+ +LLRE+   G
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 294/616 (47%), Gaps = 61/616 (9%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK---SCSVDLVEMR 88
           ++G  + C    G   +A  +F+++KR G+  P   + N LL AL +   S S+ L +  
Sbjct: 130 SIGAYVAC----GRPHQAAQIFNRMKRLGM-QPTLLTCNTLLNALVRFPSSHSIRLSKAV 184

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
             +    G   +  +   L+   C   +F +A+ V  ++ D+G   +++ ++ +L    K
Sbjct: 185 FTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCK 244

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G +++A +L+  M +  +  N  TF +L+ G  +   + +A  + + M+++    DA  
Sbjct: 245 KGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWT 304

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V+I G CK  ++  A++L  EM+   ++PD    + LI  C                 
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGC----------------- 347

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                             +GS ++ + L++ M +G                 + PN+ ++
Sbjct: 348 ----------------FEHGSSEEGFKLIEEM-EGR---------------GMKPNSVTY 375

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           ++++   +K GK+D      R+M + GC+ ++  YN LI   C   +++E++ L+ EM  
Sbjct: 376 NVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGR 435

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAM 446
            G K    TLN+M R LCR + +  A +L+   R +G+    V + TL+I    KH KA 
Sbjct: 436 KGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYF-KHEKAS 494

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A R   +M ++  +P I+ Y++ I GL  + + + A++   ++   G  PD + YN II
Sbjct: 495 QALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTII 554

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G C+  +V +A    N+M+ K   P V T N L+ G CK G +++A+   +  + K   
Sbjct: 555 HGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISK-GK 613

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             D ++Y T+I  LC   R  +A  L  EMEEK   P+  T+ A++ GL    R + A  
Sbjct: 614 DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEE 673

Query: 627 HFRMMKEKGMKPDMFV 642
               + EKG   + F+
Sbjct: 674 FISKIAEKGKSENQFL 689



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 232/502 (46%), Gaps = 52/502 (10%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +++N  +F +LIHG   ++R  +A+++  KM   G   D   Y+ I+ GLCK  +L  A 
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  +MK  G+ P+    + L+  C   G         W                     
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLG---------W--------------------- 282

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              + +A N+++ M                 + +V P+  +++++I+   K G++  A+ 
Sbjct: 283 ---LKEAANVIELM----------------SQNSVVPDAWTYNVMISGFCKQGRIAEAMR 323

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM  +    +V  YN LI+G       EE ++L+ EME  G KP   T N M +   
Sbjct: 324 LREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFV 383

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  +      VRKM   G  P +     LI   CK GK  EAFR + +M ++G   D V
Sbjct: 384 KKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV 443

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  +  L   +++D A +L       G   D V+Y  +I G  K ++ ++A  L++EM
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAG 584
             K +IPS+ TYN +I G C+ G  +QA+  L  +L  ESG  PD ITY T+I G C  G
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL--ESGLVPDEITYNTIIHGYCQEG 561

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + + A    N+M EK   P+ +T   L+ GLCK      AL  F     KG   D   + 
Sbjct: 562 QVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            +I +   E     AF++L+EM
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEM 643



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 188/430 (43%), Gaps = 53/430 (12%)

Query: 274 LLCNSIMRILV---SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           L CN+++  LV   S+ SI  +  +    IK      +GV++          NT+SF+I+
Sbjct: 160 LTCNTLLNALVRFPSSHSIRLSKAVFTDFIK------IGVKI----------NTNSFNIL 203

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+    + +   A+ +  +M   GC  +   YN ++DGLC   RL E+ +LL +M+  G 
Sbjct: 204 IHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGL 263

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N +    CR   +  A N++  M      P      ++I   CK G+  EA R
Sbjct: 264 FPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMR 323

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M      PD+V Y+  I G  +    +   +L  ++   G  P+ V YN+++    
Sbjct: 324 LREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFV 383

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM---------------- 554
           K  ++ E +    +M   G +P + TYN LI+  CK G +D+A                 
Sbjct: 384 KKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV 443

Query: 555 --------LCLSRMLE----------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
                   LC  R L+          +     D ++Y TLI G     +   A+ LW+EM
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           +EK   P+ IT+ ++I GLC+  +   A+     + E G+ PD   +  +I  +  E   
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV 563

Query: 657 PLAFEVLKEM 666
             AF+   +M
Sbjct: 564 EKAFQFHNKM 573


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 296/633 (46%), Gaps = 22/633 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR     G ++ A  L D++K   L   +   YN  ++   K+  VD+      E++ +
Sbjct: 239 VIRVFAREGRLDAALSLLDEMKSNCLHA-DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSH 297

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKA 154
           G   D  T T ++ V C   + D+A+ +F ++  +  V   + ++ +++ +   G+ D+A
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ER        +   +  ++    KK R+ +AL+ F++M K   A + + Y+V+I  
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDM 416

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
           LCK  ++E A ++   MK +G+ P+   ++ +I       +L     + E    +  +  
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +   S++  L   G +D AY L + M+  + I                PN   +  +I 
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI----------------PNAVVYTSLIK 520

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           +  K G+ +    +F+EM   GC  ++ L N  +D +  +    +   L  E++  GF P
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP 580

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              + + +   L +         L   M+ QG           I   CK GK  +A++ L
Sbjct: 581 DVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M  +G  P +V Y + I GL  I R+D A  LF +  ++G   +VV Y+ +I G  K 
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA  +  E++ KGL P+V T+N L++   K+  I++A++C   M +   G+P+ IT
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM-KNLKGTPNHIT 759

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y+ LI+GLC   + + A + W EM+++G  PN IT+  +I GL K      A   F   K
Sbjct: 760 YSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFK 819

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             G  PD   + A+I           A+++ +E
Sbjct: 820 ANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 295/638 (46%), Gaps = 29/638 (4%)

Query: 4   ILSRARRI-APLRVLAQDVVKSRCFMSPGAL-GFLIRCLGSVGLVEEANMLFDQVKREGL 61
           + +R  R+ A L +L  D +KS C  +   L    I C G  G V+ A   F ++K  GL
Sbjct: 242 VFAREGRLDAALSLL--DEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGL 299

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            +P++ +Y  ++  LCK   +D      ++M+        Y    ++  Y ++G+FD+A 
Sbjct: 300 -LPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAY 358

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           S+       G +   + ++ +L    K G + +A    E M   +   N  T+ VLI   
Sbjct: 359 SLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDML 417

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K   V+ A ++ D M ++G   +    +++I  LCK K+L+ A  ++  M     +PD 
Sbjct: 418 CKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDE 477

Query: 241 EILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                LI     +G +     + E   D D     ++  S+++     G  +  + + + 
Sbjct: 478 VTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKE 537

Query: 299 MIKGEPIADV---GVEMLMIFKGTVS----------------PNTSSFDIIINTLLKDGK 339
           MI      D+      M  +FK   +                P+  S+ I+I+ L+K G 
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
                 LF  M + GC+ +   YN  IDG C S ++ ++Y+LL EM+  G +PT  T  S
Sbjct: 598 ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGS 657

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L +   +  A  L  + +  G E  V   + LI    K G+  EA+  + +++Q+G
Sbjct: 658 VIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++  ++  +  L+  + ++ AL  F+++      P+ + Y+I+I+GLC+ ++  +A 
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             + EM  +GL P+  TY  +I G  K+GNI +A     R  +   G PD  +Y  +I+G
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFER-FKANGGVPDSASYNAIIEG 836

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           L  + R  +A  ++ E   KGC  +  T +AL+  L K
Sbjct: 837 LSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 166/638 (26%), Positives = 295/638 (46%), Gaps = 31/638 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ C+ S  L E  +++  Q  R+    P   +Y  L+ AL      D++     +MQ+ 
Sbjct: 170 ILSCIKSNKLREGFDLI--QCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQEL 227

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G+    +  T +++V+   G+ D ALS+ +E+  +    D  ++++ +  F K G+VD A
Sbjct: 228 GYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMA 287

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +    +    +  ++ T+  +I    K +R+D+A+++F++M ++     A  Y+ +I G
Sbjct: 288 WKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMG 347

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-DRDVNTMT 273
                + + A  L    K  G  P     + ++T    +G L   ++   E  +D     
Sbjct: 348 YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNL 407

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N ++ +L   G ++ A+ +  AM +                  + PN  + +I+I+ 
Sbjct: 408 STYNVLIDMLCKAGEVEAAFKVRDAMKEA----------------GLFPNVMTVNIMIDR 451

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K  KLD A S+F  M    C  +   + +LIDGL    R++++Y L  +M +S   P 
Sbjct: 452 LCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPN 511

Query: 394 HFT----LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                  + S F+C  R++D      + ++M  +G  P ++     +  + K G+  +  
Sbjct: 512 AVVYTSLIKSFFKC-GRKED---GHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
               ++   GF+PD++ YS  I GL+         ELF  +   GC  D  AYN  I G 
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SP 568
           CK+ +V +A  L  EM TKG  P+V TY  +I+G  K   +D+A +       K +G   
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA--KSNGLEL 685

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +V+ Y++LIDG    GR D+A ++  E+ +KG  PN  T+  L+  L K +    ALV F
Sbjct: 686 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCF 745

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + MK     P+   +  LI+          AF   +EM
Sbjct: 746 QNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEM 783



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 279/624 (44%), Gaps = 27/624 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y+ LL  + K+   D  E  L EM   G+G    T   L+     S +  +   +   +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +      ++ L+ A S   E D    L  +M +    ++   F  +I  F ++ R+
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D AL L D+M  +   +D  +Y+V I    K  +++MA + + E+K  G+ PD    + +
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I        L   V EI+E  + N         N+++    S G  D+AY+LL+      
Sbjct: 310 IGVLCKGNRLDEAV-EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368

Query: 304 PIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            I  V                 E L  F   K   +PN S+++++I+ L K G+++ A  
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +   M + G   NV   N +ID LC + +L+E+  +   M      P   T  S+   L 
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  V  A  L  +M      P     T LIK   K G+  +  +   +M+  G  PD+ 
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +A +  +           LF +I + G  PDV++Y+I+I GL KA    E  +LF  M
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G +     YN  I+G+CKSG +++A   L  M  K    P V+TY ++IDGL    R
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK-GRQPTVVTYGSVIDGLAKIDR 667

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A ML+ E +  G   N + + +LI G  K  R   A +    + +KG+ P+++ +  
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727

Query: 646 LISAFLS--ELNPPLA-FEVLKEM 666
           L+ A +   E+N  L  F+ +K +
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNL 751


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/643 (25%), Positives = 287/643 (44%), Gaps = 67/643 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL----LQVYCNSGQFDKALSV 123
           +Y  L+  L  +  +D V+  L   + +       +L PL    +Q Y  +G+   A+  
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSH---LAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 124 FNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F  + +         ++ ++ A       D+A ++  RM    +  + +T  V +  F  
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R   AL+L   +++ G  +  A Y  ++ GL  +     A  L+ EM G  + PD   
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 243 LSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + ++ +   +G++     LL K +      N  T  CN  +R L  +G +++A  L++ 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFT--CNIWIRGLCEDGRLEEAVALVER 271

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M                    V+P+  +++ ++  L KD K+  A      M   GC+ +
Sbjct: 272 M-----------------GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL--------------------- 397
            F YN +IDG C S  L+E+ ELL++    GF P   T                      
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFN 374

Query: 398 --------------NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
                         NS+ + LCR+  ++ AL ++ +M  +G  P +    ++I  LCK G
Sbjct: 375 EAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG 434

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              +A   + D + +G+LPD+  ++  I G     ++D AL+L   +  +G  PDV+ YN
Sbjct: 435 NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYN 494

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +++GLCKA +  E  + F EMI KG  P+  TYN+LI  +CK   +++A   + RM + 
Sbjct: 495 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ- 553

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   PD +++ TLI G C  G  D A +L+ +++EKG +    TF  LI         + 
Sbjct: 554 DGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 613

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F  M  KG KPD++ +  L+       N   A+  L EM
Sbjct: 614 AEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEM 656



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 253/578 (43%), Gaps = 51/578 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C   P A   ++R L + G    A  LFD++    +  P+  ++N +L ALC+   V   
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDV-FPDVATFNNVLHALCQKGDVMES 230

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
              L ++   G   +K+T    ++  C  G+ ++A+++   +  +   D   ++ L+   
Sbjct: 231 GALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGL 290

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K  +V +A + + RM +     ++ T+  +I G+ K   + +A +L       GF  D 
Sbjct: 291 CKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDR 350

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y  +I GLC    +E AL+L++E +   + PD                          
Sbjct: 351 VTYCSLINGLCAEGDIERALELFNEAQAKDLKPDL------------------------- 385

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                   ++ NS+++ L   G I  A  ++  M++                    P+  
Sbjct: 386 --------VVYNSLVKGLCRQGLILHALQVMNEMVEE----------------GCHPDIW 421

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +++IIIN L K G +  A  +  +    G + +VF +N LIDG C   +L+ + +L+  M
Sbjct: 422 TYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 481

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P   T NS+   LC+            +M ++G  P      +LI+  CK  + 
Sbjct: 482 WTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 541

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   +  M Q+G +PD V ++  I G      +D A  LF+ +   G       +NI+
Sbjct: 542 EEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNIL 601

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I        +  AE +F EMI+KG  P + TY +L++G CK+ N+D+A   L+ M+ K  
Sbjct: 602 IGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISK-G 660

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             P + T+  +++ L +  R  +A+ + + M   G  P
Sbjct: 661 FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 228/512 (44%), Gaps = 30/512 (5%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           IR L   G +EEA  L   V+R G  V P+  +YN L+  LCK   V      L  M + 
Sbjct: 253 IRGLCEDGRLEEAVAL---VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D +T   ++  YC SG   +A  +  + +  G+V + V +  L+      G++++A
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL       +++ +   +  L+ G  ++  +  ALQ+ ++M + G   D   Y++II G
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNT 271
           LCK   +  A  + ++    G  PD    + LI       +L     LV+ +W    +  
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT-YGIAP 488

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  NS++  L   G   +     + MI                KG   PN  +++I+I
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMI---------------LKG-CRPNAITYNILI 532

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
               K  +L+ A  +   M Q G + +   +N LI G C +  L+ +Y L ++++E G+ 
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
            T  T N +      + ++  A  +  +M  +G++P +    +L+  LCK      A+  
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M+ +GF+P +  +   +  L    RV  A+ +   +   G  P+VV  + I+S    
Sbjct: 653 LAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILS--TD 708

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            + +A  + L  E++ KG I S   Y +L  G
Sbjct: 709 KKEIAAPKILVEELMKKGHI-SYRAYEVLHEG 739


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 292/573 (50%), Gaps = 38/573 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN L++  CK   ++     L  M       D ++   L+      G    AL V
Sbjct: 149 PNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKV 208

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGFV 181
           F+E+   G V D   +++L+  F K G+ DK  E+ ER+  DC++  N  T+ ++I+G  
Sbjct: 209 FDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLC 268

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  R D++L+++++MTK+    D   Y  +I GLC+   ++ A+++Y E+  S +  D  
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDV----NTMTLLC-NSIMRILVSNGSIDQAYNLL 296
             + ++      G+    +KE +E   V    N  T++  N +++ L  NG +++A ++ 
Sbjct: 329 THNAMLNGFCRAGK----IKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIW 384

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + + K               KG   P ++++ ++I+ L K+G+L+ AL +F+E       
Sbjct: 385 ELLCK---------------KG-CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGK 428

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + + Y++++DGLC   R++E+  ++ +M++ G+K      N +     R   +  A+N 
Sbjct: 429 LDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINF 488

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            R+M  +G  P +     LIK LCK  +  EA+ F+ +M+++ + PD++  S  + GL  
Sbjct: 489 FREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQ 548

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            K++++AL L++     G  PD+  YNI++ GLC   ++ +A  L++ M     +P++ T
Sbjct: 549 EKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVT 608

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N L+ G  K  + ++A      +L K+   PD+I+Y   I GLC   R  DAI   N+ 
Sbjct: 609 RNTLMEGLYKVRDYEKASEIWDCIL-KDGLHPDIISYNITIKGLCSCSRISDAIEFLNDA 667

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
             +G  P  +T+  L+         RAA V+FR
Sbjct: 668 LNRGILPTAVTWNILV---------RAA-VNFR 690



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 249/548 (45%), Gaps = 52/548 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDC 164
           +++ Y  +   +KAL  F  + D       V  ++ LL AF +  E D+A       +  
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           ++  N +T+ +LI    KK +++KA+ L D M       D   Y  +I G+ K   L  A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L+++ EM   G+  D    + LI      G+     KEIWE                   
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDK-GKEIWER------------------ 246

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                                        ++   +V PN  +++I+IN L K G+ D +L
Sbjct: 247 -----------------------------LVKDCSVYPNVVTYNIMINGLCKCGRFDESL 277

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            ++  MT+    +++F Y++LI GLC +  ++ +  + +E+ ES       T N+M    
Sbjct: 278 EIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGF 337

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           CR   +  +  L   M  +  +  V +N +LIK L ++GK  EA      + ++G  P+ 
Sbjct: 338 CRAGKIKESFELWMVMGKENCQTVVSYN-ILIKGLFENGKVEEAISIWELLCKKGCRPES 396

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y   I GL    R++ AL++F++        D  AY+ ++ GLCK  R+ EA  + N+
Sbjct: 397 TTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQ 456

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  +G        N LING+ ++  ++ A +   R +E +  SP +++Y TLI GLC A 
Sbjct: 457 MDKRGYKLDPHVCNPLINGFVRASKLEDA-INFFREMECKGCSPTIVSYNTLIKGLCKAE 515

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A     EM EK   P+ IT   L+ GLC+  +   AL  ++   +KG KPD+ ++ 
Sbjct: 516 RFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYN 575

Query: 645 ALISAFLS 652
            L+    S
Sbjct: 576 ILMHGLCS 583



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 240/536 (44%), Gaps = 59/536 (11%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           E V   ++ A++K    +KA +  + M D    +   +++  L++ FV+ +  D+A    
Sbjct: 80  EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFS 139

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
                   + +   Y+++I   CK +Q+E A+ L   M    + PD              
Sbjct: 140 RYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPD-------------- 185

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEM 312
                                        + S G+      L+  M+K G+ +  + V  
Sbjct: 186 -----------------------------VFSYGT------LINGMVKVGDLLGALKVFD 210

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
            M  +G V+ + + ++++I+   K G  D    ++  + +      NV  YN +I+GLC 
Sbjct: 211 EMSVRGVVA-DVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCK 269

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWV 429
             R +ES E+   M ++  +   FT +S+   LC   ++ GA+ + +++ V+       V
Sbjct: 270 CGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI-VESSLVVDAV 328

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            HN +L    C+ GK  E+F     M +E     +V Y+  I GL +  +V+ A+ ++  
Sbjct: 329 THNAML-NGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFENGKVEEAISIWEL 386

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +C  GC P+   Y ++I GLCK  R+ +A  +F E            Y+ +++G CK G 
Sbjct: 387 LCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGR 446

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +D+A+  +++M +K     D      LI+G   A + +DAI  + EME KGC+P  +++ 
Sbjct: 447 MDEAISIVNQM-DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYN 505

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            LI GLCK +R   A    + M EK  KPDM     L+     E    +A  + ++
Sbjct: 506 TLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQ 561



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 3/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P   S++ ++N  ++  + D A S  R    +    N+  YN LI   C   ++E++  L
Sbjct: 114 PGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISL 173

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L  M     KP  F+  ++   + +  D++GAL +  +M V+G    V    +LI    K
Sbjct: 174 LDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFK 233

Query: 442 HGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           HG   +       +V++    P++V Y+  I GL    R D +LE++  +  +    D+ 
Sbjct: 234 HGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMF 293

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y+ +I GLC+A  +  A  ++ E++   L+    T+N ++NG+C++G I ++      M
Sbjct: 294 TYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW--M 351

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +  +     V++Y  LI GL   G+ ++AI +W  + +KGC P   T+  LI GLCK  R
Sbjct: 352 VMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGR 411

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL  F+  ++   K D + + +++     E     A  ++ +M
Sbjct: 412 LNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 211/459 (45%), Gaps = 27/459 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  ++   +++++ ++    PN  +YN ++  LCK    D      + M       D +T
Sbjct: 235 GDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM- 161
            + L+   C +G  D A+ V+ EI++   V D    + +L  F + G++ ++ EL   M 
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMG 354

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
            ++C   +   ++ +LI G  +  +V++A+ +++ + K G   ++  Y V+I GLCKN +
Sbjct: 355 KENCQTVV---SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGR 411

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L  AL+++ E +      D    S ++     EG +   + +    + R       +CN 
Sbjct: 412 LNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNP 471

Query: 279 IMRILVSNGSIDQAYN-------------------LLQAMIKGEPIADVGVEMLMIFKGT 319
           ++   V    ++ A N                   L++ + K E  ++    +  + +  
Sbjct: 472 LINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+  +  ++++ L ++ K+++AL+L+++    G   ++ +YN L+ GLC+  +LE++ 
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L   M+ S   P   T N++   L + +D   A  +   +   G  P +    + IK L
Sbjct: 592 QLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           C   +  +A  FL D +  G LP  V ++  +   ++ +
Sbjct: 652 CSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/557 (30%), Positives = 249/557 (44%), Gaps = 51/557 (9%)

Query: 111 YCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           Y +    D ALS FN ++  H       F+ +L + +K         L  +MD   I  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T  VLI+ F   +RV+ A  +  K+ K G   D A +  +I GLC   Q+  AL L+ 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M   G  PD  I + LI                           LC +        G  
Sbjct: 169 KMIWEGFQPDVVIYATLING-------------------------LCKT--------GHT 195

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
             A  LL++M KG    DV V                +  +I++L KD +   A +LF E
Sbjct: 196 SAAIRLLRSMEKGNCQPDVVV----------------YGTLIHSLCKDRQQTQAFNLFSE 239

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   N+   N+L+  LCN    +    LL EM +S   P   +L ++   LC+   
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A ++V  M   G EP V   T LI   C   +  EA +    MV +G  P++  Y+ 
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   I+R+D A+ LF ++C     P+ V YN +I GLC   R+ +A  LF EM+  G
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            IP + TY +L++  CK+ ++D+AM  L + +E  +  PD+  YT +IDG+C AG  +DA
Sbjct: 420 QIPDLVTYRILLDYLCKNCHLDKAMALL-KAIEGSNLDPDIQIYTIVIDGMCRAGELEDA 478

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L++ +  KG  PN  T+  +  GLCK      A   F  M E     D   +  +   
Sbjct: 479 RDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 538

Query: 650 FLSELNPPLAFEVLKEM 666
           FL       A ++L+EM
Sbjct: 539 FLRNNETSRAIQLLEEM 555



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 234/501 (46%), Gaps = 29/501 (5%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKW 148
           ++M  +G  ++ YTL  L+  +C+  + + A SV  +I+  G   D   F+ L+      
Sbjct: 98  RKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++ +A  L ++M     + +   +  LI+G  K      A++L   M K     D  +Y
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWE 265
             +I  LCK++Q   A  L+SEM   GI+P+    + L+ +  + GE   +  L+ E+ +
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277

Query: 266 DRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            + + N ++L   +++  L   G + QA++++                 M+F+  V P+ 
Sbjct: 278 SKIMPNAISL--TTVVDALCKEGMVAQAHDVVD----------------MMFQSGVEPDV 319

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I+      ++D A+ +F  M   GC  NVF YN LI+G C   R++++  L  E
Sbjct: 320 VTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEE 379

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M      P   T N++   LC    +  A+ L R+M   G  P +    +L+  LCK+  
Sbjct: 380 MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH 439

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A   L  +      PDI  Y+  I G+     ++ A +LF ++ + G  P+V  YNI
Sbjct: 440 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNI 499

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +  GLCK   + EA  LF EM          TYN +  G+ ++    +A+  L  ML + 
Sbjct: 500 MTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR- 558

Query: 565 SGSPDVITYTTLI-----DGL 580
             S DV T T L+     DGL
Sbjct: 559 GFSCDVSTTTLLVGMLSDDGL 579



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 28/427 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G    A  L   +++ G C P+   Y  L+ +LCK            EM   
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK 243

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   L+   CN G++    ++ NE++D   +   +  + ++ A  K G V +A
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQA 303

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++++ M    +  +  T+  LI G   +S +D+A+++FD M   G A +   Y+ +I G
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEI---WEDRD 268
            CK ++++ A+ L+ EM    + P+    + LI      G L     L +E+    +  D
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           + T  +L    +  L  N  +D+A  LL+A I+G                 + P+   + 
Sbjct: 424 LVTYRIL----LDYLCKNCHLDKAMALLKA-IEG---------------SNLDPDIQIYT 463

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ + + G+L+ A  LF  ++  G   NV+ YN +  GLC    L+E+ +L  EM+E+
Sbjct: 464 IVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDEN 523

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
                  T N++ +   R  +   A+ L+ +M  +G    V   TLL+  L   G     
Sbjct: 524 ACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSE 583

Query: 449 FRFLTDM 455
              L DM
Sbjct: 584 AHKLEDM 590


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 172/620 (27%), Positives = 285/620 (45%), Gaps = 55/620 (8%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQ 109
           +L  +++REG  V     ++ L     +    D V++ L ++Q  +G   D      LL 
Sbjct: 3   VLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLN 62

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           V     +     SV++E+   G   + V F+ L+ A  +  +V  A  ++E M    +  
Sbjct: 63  VLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAP 122

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +E TF  L+ GFV++  ++ AL++  +M + G ++     +V+I G CK  ++E AL   
Sbjct: 123 DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYI 182

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            +    G  PD                                  +  N+ +  L  N  
Sbjct: 183 QQEIADGFEPD---------------------------------QITYNTFVNGLCQNDH 209

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +  A  ++  M++               +G   P+  +++I++N L K+G+L+ A  +  
Sbjct: 210 VGHALKVMDVMVQ---------------EGH-DPDVFTYNIVVNCLCKNGQLEEAKGILN 253

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M   GC+ ++  +N LI  LC  NRLEE+ +L R++   G  P  +T N +   LC+  
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 409 DVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           D   AL L  +M+  G  P  V +NT LI  LC  GK  +A   L DM   G     + Y
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNT-LIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 372

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I GL    R++ A E+F  +   G   + + +N +I GLCK +++ +A +L N+MI+
Sbjct: 373 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +GL P+  TYN ++  +CK G+I +A   L  M        DV+TY TLI+GLC AGR  
Sbjct: 433 EGLQPNNITYNSILTHYCKQGDIKKAADILETM-TANGFEVDVVTYGTLINGLCKAGRTQ 491

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A+ +   M  KG  P    +  ++  L + +  R AL  FR M E G  PD   +  + 
Sbjct: 492 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 551

Query: 648 SAFLSELNP-PLAFEVLKEM 666
                   P   AF+ + EM
Sbjct: 552 RGLCRGGGPIKEAFDFMLEM 571



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 257/556 (46%), Gaps = 56/556 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  ++N L++ALC++  V    + L+EM   G   D+ T T L+Q +   G  + AL V
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +++ G     V  ++L+  + K G V+ A   I++        ++ T+   ++G  +
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  AL++ D M + G   D   Y++++  LCKN QLE A  + ++M   G  PD   
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIK 301
            + LI +                                 L +   +++A +L  Q  +K
Sbjct: 267 FNTLIAA---------------------------------LCTGNRLEEALDLARQVTVK 293

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G                 VSP+  +F+I+IN L K G   LAL LF EM   GC  +   
Sbjct: 294 G-----------------VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 336

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LID LC+  +L ++ +LL++ME +G   +  T N++   LC++  +  A  +  +M 
Sbjct: 337 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396

Query: 422 VQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +QG     +  NT LI  LCK  K  +AF  +  M+ EG  P+ + Y++ +        +
Sbjct: 397 LQGISRNAITFNT-LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 455

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++   + A+G   DVV Y  +I+GLCKA R   A  +   M  KG+ P+   YN +
Sbjct: 456 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 515

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEK 599
           +    +  NI  A L L R + +    PD +TY  +  GLC  G P  +A     EM +K
Sbjct: 516 LQSLFRRNNIRDA-LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574

Query: 600 GCAPNRITFMALITGL 615
           G  P   +F  L  GL
Sbjct: 575 GFIPEFSSFRMLAEGL 590



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 232/506 (45%), Gaps = 55/506 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C     + N L+   CK   V D +    +E+ D G+  D+ T    +   C +     A
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L V + ++  G   D   ++I++    K G++++A  ++ +M D     +  TF  LI  
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 273

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               +R+++AL L  ++T  G + D   ++++I  LCK     +AL+L+ EMK SG TPD
Sbjct: 274 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 333

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                          E+T                   N+++  L S G + +A +LL+ M
Sbjct: 334 ---------------EVTY------------------NTLIDNLCSLGKLGKALDLLKDM 360

Query: 300 IKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                            + T  P +T +++ II+ L K  +++ A  +F +M   G  +N
Sbjct: 361 -----------------ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 403

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N LIDGLC   ++++++EL+ +M   G +P + T NS+    C++ D+  A +++ 
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M   G E  V     LI  LCK G+   A + L  M  +G  P    Y+  +  L    
Sbjct: 464 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 523

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCK-AQRVAEAEDLFNEMITKGLIPSVATY 537
            +  AL LFR++   G  PD + Y I+  GLC+    + EA D   EM+ KG IP  +++
Sbjct: 524 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 583

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEK 563
            +L  G    G  D  +  +  ++EK
Sbjct: 584 RMLAEGLLNLGMDDYFIRAIEIIMEK 609



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 85/443 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ CL   G +EEA  + +Q+   G C+P+  ++N L+ ALC    ++      +++   
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRG-CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D YT   L+   C  G    AL +F E+ + G   DE  ++ L+      G++ KA
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M+      +  T+  +I G  KK R+++A ++FD+M   G + +A  ++ +I G
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK+K+++ A +L ++M   G+ P                               N +T 
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQP-------------------------------NNITY 442

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+      G I +A ++L+ M         G E+ ++  GT          +IN L
Sbjct: 443 --NSILTHYCKQGDIKKAADILETMTAN------GFEVDVVTYGT----------LINGL 484

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+  +AL + R M   G       YN ++  L   N + ++  L REM E G  P  
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +FR LCR                                    G   EAF F+ +
Sbjct: 545 LTYKIVFRGLCR----------------------------------GGGPIKEAFDFMLE 570

Query: 455 MVQEGFLPDIVCYSAAIGGLIDI 477
           MV +GF+P+   +     GL+++
Sbjct: 571 MVDKGFIPEFSSFRMLAEGLLNL 593



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 3/226 (1%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +D+  + C  S      +I  L     +EEA  +FDQ+  +G+   N  ++N L++ L
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS-RNAITFNTLIDGL 414

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           CK   +D     + +M   G   +  T   +L  YC  G   KA  +   +  +G+ VD 
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 474

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             +  L+    K G    A +++  M    +R   K +  ++    +++ +  AL LF +
Sbjct: 475 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 534

Query: 196 MTKSGFASDAAMYDVIIGGLCK-NKQLEMALQLYSEMKGSGITPDF 240
           M + G   DA  Y ++  GLC+    ++ A     EM   G  P+F
Sbjct: 535 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 580


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 166/614 (27%), Positives = 286/614 (46%), Gaps = 53/614 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L++ L  +  +D+     KEM + G+  DK+T+    Q  C  G++  AL +
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                +   +D  + + ++    +    D+A   + RM   +   N  T+  L+ GF+KK
Sbjct: 98  IER--EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKK 155

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++    ++ + M K G   + ++++ ++   C  +    A +L   M   G  P +   
Sbjct: 156 KQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAY 215

Query: 244 SKLITS-CSDE----GELTLLVKEIWED--------RDVNTMTLLCNSIMRILVSNGSID 290
           +  I S C  E     +L  L ++++E+          VNT      +  R L   G  D
Sbjct: 216 NIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA-----NFARCLCGMGKFD 270

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A+ +++ M+                KG V P+TS++  +I  L +  K++ A  LF+EM
Sbjct: 271 MAFQIIKVMMG---------------KGFV-PDTSTYSKVITFLCEAMKVEKAFLLFQEM 314

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
             +G   +V+ Y  LID  C +  +E++     EM   G      T  ++     + + +
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQL 374

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV-------------- 456
             A ++  +M   G  P     + L+  LCK G+  +A    T ++              
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434

Query: 457 --QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
              +   P++V Y A I GL    +V  A EL   + ++GC P+ + Y+ +I G CK  +
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A+++F  M   G +P+V TY  LI+   K   +D AM  LS+M+E  S +P+V+TYT
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE-SSCTPNVVTYT 553

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +IDGLC  G    A+ L + MEEKGC+PN +T+ ALI GL K  +   +L  F  M  K
Sbjct: 554 AMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTK 613

Query: 635 GMKPDMFVFVALIS 648
           G  P+   +  LI+
Sbjct: 614 GCAPNYVTYRVLIN 627



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 172/674 (25%), Positives = 278/674 (41%), Gaps = 84/674 (12%)

Query: 44  GLVEEANMLFDQV------KREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           GL+E +  LFD+        R   C+PN  +Y  LL    K   +   +  +  M   G 
Sbjct: 116 GLMEAS--LFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGC 173

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACEL 157
             +      L+  YCN+  +  A  +   + D G    +V   + +     GE   + +L
Sbjct: 174 NPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDL 233

Query: 158 I-------ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +       E M   +  LN+              + D A Q+   M   GF  D + Y  
Sbjct: 234 LALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSK 293

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRD 268
           +I  LC+  ++E A  L+ EMK  G+ PD    + LI S    G    L+++   W D  
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAG----LIEQARSWFDE- 348

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                      MR +  + ++     LL A +K + +         +      PNT ++ 
Sbjct: 349 -----------MRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397

Query: 329 IIINTLLKDGKLDLALSLFREMT----QIGC------------MQNVFLYNNLIDGLCNS 372
            +++ L K G++  A  ++ ++      +G               NV  Y  LIDGLC +
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKA 457

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           +++ ++ ELL  M  +G +P H   +++    C+   +  A  +  +M   G+ P V   
Sbjct: 458 HKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTY 517

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI  + K  +   A + L+ MV+    P++V Y+A I GL  I     AL+L   +  
Sbjct: 518 TSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            GC P+VV Y  +I GL K+ +V  +  LF +M TKG  P+  TY +LIN  C +G +D+
Sbjct: 578 KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDE 637

Query: 553 AMLCLSRM--------------------------------LEKESGSPDVITYTTLIDGL 580
           A   LS M                                LE     P    Y  LID  
Sbjct: 638 AHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRIT---FMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             AGR ++A+ L  EM E   + N  +   + +LI  LC   +   A   +  +  KG+ 
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVV 757

Query: 638 PDMFVFVALISAFL 651
           P++ VFV LI   +
Sbjct: 758 PELSVFVCLIKGLI 771



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 222/510 (43%), Gaps = 84/510 (16%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A +LF ++K  G+  P+ Y+Y  L+++ CK+  ++       EM+  G   +  T T
Sbjct: 304 VEKAFLLFQEMKSVGV-NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE----LIER 160
            LL  Y  + Q  +A  +FN +ID G     + +S L+    K GE+ KACE    LI  
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGT 422

Query: 161 MDDC------------NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            D+             +I  N  T+  LI G  K  +V  A +L D M  +G   +  +Y
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--- 265
           D +I G CK  +++ A +++  M   G  P     + LI +   +  L L +K + +   
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542

Query: 266 ---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                +V T T + + + RI    G   +A  LL  M +               KG  SP
Sbjct: 543 SSCTPNVVTYTAMIDGLCRI----GECQKALKLLSMMEE---------------KG-CSP 582

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+ L K GK+DL+L LF +M+  GC  N   Y  LI+  C +  L+E++ LL
Sbjct: 583 NVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLL 642

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM+++ +        S+ +   ++   + +L L+ ++   G  P      LLI    K 
Sbjct: 643 SEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKA 700

Query: 443 GKAMEA--------------------------------------FRFLTDMVQEGFLPDI 464
           G+  EA                                      F   +++ ++G +P++
Sbjct: 701 GRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPEL 760

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHG 494
             +   I GLI + + + AL+L   IC  G
Sbjct: 761 SVFVCLIKGLIKVNKWNEALQLCYSICDEG 790



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 78/374 (20%)

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR-- 406
           E+   G   +   YN L+  L  + +++  + + +EM ESGF    FT+    + LC+  
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 407 ----------RQD-----------VVG---------ALNLVRKMRVQGHEPWVKHNTLLI 436
                     R+D           + G         A++ + +MR     P V     L+
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               K  +     R +  M++EG  P+   +++ +    + +    A +L + +   GC 
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 497 PDVVAYNIIISGLCKAQR------VAEAEDLFNEMIT----------------------- 527
           P  VAYNI I  +C  +       +A AE ++ EM+                        
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 528 ------------KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYT 574
                       KG +P  +TY+ +I   C++  +++A L    M  K  G +PDV TYT
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM--KSVGVNPDVYTYT 327

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKE 633
            LID  C AG  + A   ++EM   GC+ N +T+ AL+    K  + P+A+ +  RM+ +
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI-D 386

Query: 634 KGMKPDMFVFVALI 647
            G  P+   + AL+
Sbjct: 387 AGCPPNTITYSALV 400



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 43/307 (14%)

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           E+++ G++P+  T N++ + L     +     + ++M   G            + LCK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A   L  + +E F  D V  +  I GL++    D A+     +  + C P+VV Y 
Sbjct: 90  RWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE- 562
            +++G  K +++   + + N M+ +G  P+ + +N L++ +C + +   A   L RM + 
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 563 -------------------KESGSPDVIT-----YTTLIDGLCI---------------A 583
                              +E  SPD++      Y  ++   C+                
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+ D A  +   M  KG  P+  T+  +IT LC+  +   A + F+ MK  G+ PD++ +
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 644 VALISAF 650
             LI +F
Sbjct: 327 TILIDSF 333



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP  + +  LI  LG  G V+ +  LF Q+  +G C PN  +Y  L+   C +  +D   
Sbjct: 581 SPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG-CAPNYVTYRVLINHCCAAGLLDEAH 639

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCN-----SGQFDKALSVFNEIIDHGWVD-EHVFSI 140
             L EM+   W   KY     LQ YC+     S +F  +L +  E+  HG V    V+ +
Sbjct: 640 SLLSEMKQTYW--PKY-----LQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGL 692

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLN---EKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           L+  FSK G +++A EL + M + +  LN   +  +  LI      S+++KA +L+ ++T
Sbjct: 693 LIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEIT 752

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
           + G   + +++  +I GL K  +   ALQL
Sbjct: 753 RKGVVPELSVFVCLIKGLIKVNKWNEALQL 782


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 167/629 (26%), Positives = 294/629 (46%), Gaps = 59/629 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y+Y+ L+EA CK    D  +  L EM++ G G +  T   L+   C SG  ++A   
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++ D+G V D   +  L+    K    ++A  L++ M    ++ N   +  LI GF++
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +   D+A ++  +M  +G   +   YD ++ GLCK  Q++ A  L  +M      PD   
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 243 LSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + +I       ++ +   L+ E+ E+  ++      + ++  L  +G  ++A +LL+ M
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEM-ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 353

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            KG + PN   +  +I+   ++G + LA  +F +MT++  + ++
Sbjct: 354 TT---------------KG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 397

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + YN+LI GL    R+EES +   +M+E G  P  FT + +     +  D+  A  LV++
Sbjct: 398 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 457

Query: 420 MRVQGHEP-----------WVKHNT------------------------LLIKELCKHGK 444
           M   G +P           + K +                         +LI  L   G 
Sbjct: 458 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 517

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              AFR L+++ + G +PD+  YS+ I GL      + A  +  ++   G  P++V YN 
Sbjct: 518 MEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 577

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GLCK+  ++ A ++FN ++ KGL+P+  TY  LI+G CK G+I  A    + ML   
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT- 636

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             +PD   Y+ L  G   AG  + A+ L  EM  +G A +  +F  L+ G CK  + +  
Sbjct: 637 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQET 695

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           L    ++  +G+ P+      +IS  LSE
Sbjct: 696 LKLLHVIMGRGLVPNALTIENIISG-LSE 723



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 291/636 (45%), Gaps = 22/636 (3%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C ++      LI  L   G VEEA      ++  GL VP+ ++Y  L+  LCKS   +  
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL-VPDGFTYGALINGLCKSRRSNEA 206

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           +  L EM       +      L+  +   G  D+A  +  E++  G     + +  L+  
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G++D+A  L+++M   + R +  T+ ++I G  +      A +L  +M  +G + +
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y ++I GLC++ + E A  L  EM   G+ P+  + + LI+    EG ++L  +   
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386

Query: 265 EDRDVNTMT-LLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +   VN +  L C NS++  L   G ++++      M +               +G + P
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE---------------RGLL-P 430

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+  LK+G L+ A  L + M   G   N  +Y +L++    S+ +E+     
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + M + G    +     +   L    ++  A  ++ ++   G  P V   + LI  LCK 
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               +AF  L +M ++G  P+IVCY+A I GL     +  A  +F  I A G  P+ V Y
Sbjct: 551 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 610

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I G CK   ++ A  L+NEM+  G+ P    Y++L  G   +G+++QAM  +  M  
Sbjct: 611 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 670

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +  G   + ++  L+DG C  G+  + + L + +  +G  PN +T   +I+GL +  +  
Sbjct: 671 R--GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 728

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
                F  +++K  +     F +L    +++   PL
Sbjct: 729 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 150/626 (23%), Positives = 282/626 (45%), Gaps = 38/626 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +EA  +  ++   G+  PN  +Y+ L+  LCK   +D   + LK+M       D  T
Sbjct: 236 GNADEAFKMIKEMVAAGV-QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              +++ +        A  + +E+ + G   + + +SI++    + GE +KA +L+E M 
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ N   +  LI G+ ++  V  A ++FDKMTK     D   Y+ +I GL K  ++E
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 414

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            + + +++M+  G+ P+    S LI      G+L    + +    D     L  N ++ I
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG---LKPNDVIYI 471

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                      +LL++  K + I  V      +    V  +   + I+I+ L   G ++ 
Sbjct: 472 -----------DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 520

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +  E+ + G + +V +Y++LI GLC +   E+++ +L EM + G  P     N++  
Sbjct: 521 AFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 580

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+  D+  A N+   +  +G  P     T LI   CK G    AF    +M+  G  P
Sbjct: 581 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D   YS    G      ++ A+ L  ++   G    + ++N ++ G CK  ++ E   L 
Sbjct: 641 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLL 699

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP---------DVITY 573
           + ++ +GL+P+  T   +I+G  ++G + +       + +K S S          D+I  
Sbjct: 700 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759

Query: 574 TT--------LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
                     +I   C  G  D A+ML + +  K       +++A++  LC+  +   AL
Sbjct: 760 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 819

Query: 626 VHFRMMKEKG-MKPDMFVFVALISAF 650
              + M ++G ++P +   VAL+  F
Sbjct: 820 NLLKEMDKRGNLQPTL---VALLGIF 842



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 266/594 (44%), Gaps = 56/594 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  +G ++ A++L  Q+ R+    P+  +YN ++E   +  +       L EM++ 
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDS-HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENA 321

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   + YT + ++   C SG+ +KA  +  E+   G   +  V++ L+  + + G V  A
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           CE+ ++M   N+  +   +  LI G  K  RV+++ + F +M + G   +   Y  +I G
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             KN  LE A QL   M  +G+ P+  I   L+ S     ++  +        D   M  
Sbjct: 442 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM-- 499

Query: 275 LCNSIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------- 316
           L N I  IL+ N    G+++ A+ +L  + K   + DV V   +I               
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559

Query: 317 -----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                K  V PN   ++ +I+ L K G +  A ++F  +   G + N   Y +LIDG C 
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +  ++ L  EM  +G  P  F  + +        D+  A+ L+ +M ++GH      
Sbjct: 620 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSF 679

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
           N L +   CK GK  E  + L  ++  G +P+ +     I GL +  ++     +F ++ 
Sbjct: 680 NNL-VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL- 737

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEA-----EDLFNEMITKGLIPSVATYNLLINGWCK 546
                                Q+ +E+       LF +MI +G IP +   + +I   CK
Sbjct: 738 --------------------QQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCK 776

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            GN+D+A++ L  ++  +S      +Y  ++D LC  G+  +A+ L  EM+++G
Sbjct: 777 EGNLDKALM-LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 238/565 (42%), Gaps = 52/565 (9%)

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           S+   + D G     V  +L+  + K G V  A E++  M D  +  + +    L+   +
Sbjct: 34  SIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL 93

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   +    ++ + M  +G + D   Y  +I   CK ++ + A ++  EM+  G   +  
Sbjct: 94  RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTV 153

Query: 242 ILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI      G  E     K+  ED  +        +++  L  +   ++A  LL  M
Sbjct: 154 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 213

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
              E                + PN   +  +I+  +++G  D A  + +EM   G   N 
Sbjct: 214 SCAE----------------LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 257

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+NL+ GLC   +++ +  LL++M     +P   T N +     R  +   A  L+ +
Sbjct: 258 ITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSE 317

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P V   +++I  LC+ G+  +A   L +M  +G  P+   Y+  I G      
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V LA E+F  +      PD+  YN +I GL K  RV E+   F +M  +GL+P+  TY+ 
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 437

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVI---------------------------- 571
           LI+G+ K+G+++ A   + RML+      DVI                            
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 572 ------TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
                  Y  LI  L  +G  + A  + +E+E+ G  P+   + +LI+GLCK      A 
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
                M +KG+ P++  + ALI   
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGL 582


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 177/665 (26%), Positives = 312/665 (46%), Gaps = 94/665 (14%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYD 100
           S+G +E A M+   +   G+ + N  +   L++  C+ C ++  E  L+EM+   G   D
Sbjct: 265 SIGDMERAEMVLKLMGERGI-LRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLD 323

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
           +Y    L+  YC   + D A+ + +E+++ G  ++  + + L+  + K G+V +A  L+ 
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           RM D ++     ++  L+ GF ++  V KA+ ++++M + G  S+   ++ ++ GLC+  
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             E AL ++  M   G+TPD                            +V+  TLL    
Sbjct: 444 AFEDALHVWHLMLKRGVTPD----------------------------EVSYCTLL---- 471

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                         +LL  M  GE    + +   ++ +G    +T +F+ +IN   K  K
Sbjct: 472 --------------DLLFKM--GEFFRALALWNDILARG-YGRSTYAFNTMINGFCKMEK 514

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A   F  M ++G   +   Y  LIDG C    +EE++++  +ME+    P+    NS
Sbjct: 515 MIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L + +     ++L+ +M ++G  P V     LI   C  G+  +AF    DM+++G
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLA---------LELFRDICAHG---------------- 494
           F P+++  S  +  L  + R+D A         L++F D   HG                
Sbjct: 635 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLD---HGYFDRLHKADDGNLDSQ 691

Query: 495 -------------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
                          P+ V YNI I+GLCK+ +V +A+ +F+ ++ +G  P   TY  LI
Sbjct: 692 KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G+  +GN++ A      ML K   +P++ITY  LI+GLC +G  D A  L++++  KG 
Sbjct: 752 HGYSAAGNVNDAFSLRDEML-KRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGL 810

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           APN I++  LI G CK    R AL     M ++G+ P +  + ALI  F  + +   A  
Sbjct: 811 APNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATN 870

Query: 662 VLKEM 666
           +L EM
Sbjct: 871 LLDEM 875



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 175/680 (25%), Positives = 313/680 (46%), Gaps = 57/680 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  S  +   L+  L   G    A +++D + R G+ VP+ ++ + ++ A CK   V++ 
Sbjct: 179 CVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGI-VPDVFTCSIMVNAYCKDGWVNVA 237

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              +KEM   G+  +  T   L+    + G  ++A  V   + + G +   V  ++L+  
Sbjct: 238 VDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKG 297

Query: 145 FSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
           + +  ++++A +++  M+    + L+E  + VLI G+ +  ++D A++L D+M   G   
Sbjct: 298 YCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRM 357

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           +  + + +I G CKN Q+  A +L   M    + P+    S L+     EG +T  +   
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVY 417

Query: 264 WE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
            E     + +  +  NS+++ L   G+ + A ++   M+K               +G V+
Sbjct: 418 NEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLK---------------RG-VT 461

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  S+  +++ L K G+   AL+L+ ++   G  ++ + +N +I+G C   ++ E+ E 
Sbjct: 462 PDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEET 521

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              M+E GF+P   T  ++    C+  +V  A  +  KM  +   P ++    LI  L K
Sbjct: 522 FNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFK 581

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             K  E    L++M  +G  P++V Y   I G  D  R+D A   + D+   G  P+V+ 
Sbjct: 582 SKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVII 641

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGL------------------------------- 530
            + I+S L +  R+ EA  L  +M+   +                               
Sbjct: 642 CSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESS 701

Query: 531 ----IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
               +P+   YN+ I G CKSG +D A    S +L +   SPD  TY TLI G   AG  
Sbjct: 702 KSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLR-GFSPDNFTYCTLIHGYSAAGNV 760

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           +DA  L +EM ++G APN IT+ ALI GLCK      A   F  +  KG+ P++  +  L
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I  +    N   A ++  +M
Sbjct: 821 IDGYCKNGNTREALDLRNKM 840



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 257/541 (47%), Gaps = 31/541 (5%)

Query: 120 ALSVFNEII---DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           +L V+NE++   +       VF ++L  + + G +  A  + + M       + ++   L
Sbjct: 130 SLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRL 189

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +   V+K     A+ ++D + + G   D     +++   CK+  + +A+    EM   G 
Sbjct: 190 LSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGF 249

Query: 237 TPDFEILSKLITSCSDEGELT---LLVKEIWED---RDVNTMTLLCNSIMRILVSNGSID 290
             +    + LI  C   G++    +++K + E    R+  T+TLL     R       ++
Sbjct: 250 ELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCR----QCKLE 305

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +L+ M + E +                 +  ++ ++I+   +  K+D A+ L  EM
Sbjct: 306 EAEKVLREMERSEGMV---------------LDEYAYGVLIDGYCRVCKMDDAVRLRDEM 350

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
             +G   N+F+ N LI+G C + ++ E+  LL  M +   +P  ++ +++    CR   V
Sbjct: 351 LNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLV 410

Query: 411 VGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             A+++  +M RV      V HN+LL K LC+ G   +A      M++ G  PD V Y  
Sbjct: 411 TKAISVYNEMLRVGIQSNVVTHNSLL-KGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCT 469

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  L  +     AL L+ DI A G      A+N +I+G CK +++ EAE+ FN M   G
Sbjct: 470 LLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG 529

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P   TY  LI+G+CK GN+++A     +M EKE+  P +  Y +LI GL  + +  + 
Sbjct: 530 FEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM-EKEAILPSIELYNSLIGGLFKSKKTREV 588

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + L +EM  KG +PN +T+  LI G C   R   A   +  M EKG  P++ +   ++S+
Sbjct: 589 MDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSS 648

Query: 650 F 650
            
Sbjct: 649 L 649



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 238/515 (46%), Gaps = 26/515 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GLV +A  +++++ R G+   N  ++N LL+ LC+  + +        M   G   D+ +
Sbjct: 408 GLVTKAISVYNEMLRVGI-QSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVS 466

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              LL +    G+F +AL+++N+I+  G+    + F+ ++  F K  ++ +A E   RM 
Sbjct: 467 YCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMK 526

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +     +  T+  LI G+ K   V++A ++ +KM K        +Y+ +IGGL K+K+  
Sbjct: 527 ELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTR 586

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
             + L SEM   G++P+      LI    DEG L       ++  ++      ++C+ I+
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIV 646

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G ID+A  LLQ M+  +   D G                 FD +      DG L
Sbjct: 647 SSLYRLGRIDEANMLLQKMVNLDVFLDHGY----------------FDRLHKA--DDGNL 688

Query: 341 D---LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           D   +A +L  E ++   + N  +YN  I GLC S +++++ ++   +   GF P +FT 
Sbjct: 689 DSQKIADTL-DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTY 747

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++        +V  A +L  +M  +G  P +     LI  LCK G    A +    +  
Sbjct: 748 CTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHL 807

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  P+++ Y+  I G         AL+L   +   G  P ++ Y+ +I G CK   + +
Sbjct: 808 KGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGK 867

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           A +L +EM       ++A +  L+ G  K G + +
Sbjct: 868 ATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKK 902



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 154/367 (41%), Gaps = 16/367 (4%)

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K  PIA +    L   +    PN +S   +++ L +    D   S   E+  +   +N 
Sbjct: 70  LKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL--VTPSKN- 126

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
                      N + L    EL+R  E+  F PT F +  + +  C +  +  AL++   
Sbjct: 127 -----------NYSSLVVWNELVRVFEDFKFSPTVFDM--ILKIYCEKGMIKNALHVFDN 173

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P ++    L+  L + G++  A      + + G +PD+   S  +        
Sbjct: 174 MGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGW 233

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V++A++  +++   G   +VV YN +I G      +  AE +   M  +G++ +  T  L
Sbjct: 234 VNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTL 293

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI G+C+   +++A   L  M   E    D   Y  LIDG C   + DDA+ L +EM   
Sbjct: 294 LIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNV 353

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G   N     ALI G CK  +   A      M +  ++P+ + +  L+  F  E     A
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 660 FEVLKEM 666
             V  EM
Sbjct: 414 ISVYNEM 420



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 4/211 (1%)

Query: 24  SRCFMSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           S+ F  P ++ + I   G    G V++A  +F  +   G   P+N++Y  L+     + +
Sbjct: 701 SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS-PDNFTYCTLIHGYSAAGN 759

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
           V+       EM   G   +  T   L+   C SG  D+A  +F+++   G     + ++I
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K G   +A +L  +M    I  +  T+  LI+GF K+  + KA  L D+M +  
Sbjct: 820 LIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELF 879

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
              + A +  ++ G  K  +++   +L++ M
Sbjct: 880 ADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 252/532 (47%), Gaps = 21/532 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ LL A +K  + D    L E+M    I  N  T+ +LI+ F ++S++  AL L  KM 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEG 254
           K G+         ++ G C  K++  A+ L  +M   G  PD    + LI      +   
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E   LV  + + R      +    ++  L   G ID A+NLL  M   +  ADV +    
Sbjct: 133 EAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI---- 187

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                       F+ II++L K   +D AL+LF+EM   G   NV  Y++LI  LC+  R
Sbjct: 188 ------------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
             ++ +LL +M E    P   T N++     +    V A  L   M  +  +P +     
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI   C H +  +A +    MV +   PD+  Y+  I G    KRV+   ELFR++   G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              D V Y  +I GL        A+ +F +M++ G+ P + TY++L++G C +G +++A+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M +K     D+  YTT+I+G+C AG+ DD   L+  +  KG  PN +T+  +I+G
Sbjct: 416 EVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LC     + A    + MKE G  PD   +  LI A L + +   + E+++EM
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 248/533 (46%), Gaps = 22/533 (4%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +VKSR   S      L+  +  +   +    L ++++R G+   N Y+YN L+   C+  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRS 59

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
            + L    L +M   G+     TL+ LL  YC+  +   A+++ +++++ G+  D   F+
Sbjct: 60  QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+       +  +A  L++RM     + N  T+ V+++G  K+  +D A  L +KM  +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---EL 256
              +D  +++ II  LCK + ++ AL L+ EM+  GI P+    S LI+     G   + 
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           + L+ ++ E + +N   +  N+++   V  G   +A  L   MI                
Sbjct: 240 SQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---------------- 282

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K ++ P+  +++ +IN      +LD A  +F  M    C  ++  YN LI G C S R+E
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           +  EL REM   G      T  ++ + L    D   A  + ++M   G  P +   ++L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC +GK  +A      M +     DI  Y+  I G+    +VD   +LF  +   G  
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           P+VV YN +ISGLC  + + EA  L  +M   G +P   TYN LI    + G+
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 180/379 (47%), Gaps = 34/379 (8%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   F+ +++ + K  K DL +SL  +M ++G   N++ YN LI+  C  +++  +  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M + G++P+  TL+S+    C  + +  A+ LV +M   G+ P     T LI  L  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           H KA EA   +  MVQ G  P++V Y   + GL     +DLA  L   + A     DVV 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N II  LCK + V +A +LF EM TKG+ P+V TY+ LI+  C  G    A   LS M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 562 EKE----------------------------------SGSPDVITYTTLIDGLCIAGRPD 587
           EK+                                  S  PD+ TY +LI+G C+  R D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  ++  M  K C P+  T+  LI G CK  R       FR M  +G+  D   +  LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 648 SAFLSELNPPLAFEVLKEM 666
                + +   A +V K+M
Sbjct: 368 QGLFHDGDCDNAQKVFKQM 386



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 31/431 (7%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  L D++ + G C PN  +Y  ++  LCK   +DL    L +M+      D      +
Sbjct: 133 EAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   C     D AL++F E+   G     V +S L+     +G    A +L+  M +  I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  TF  LI  FVK+ +  +A +L D M K     D   Y+ +I G C + +L+ A Q
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           ++  M      PD +  + LI        +   T L +E+   R +   T+   ++++ L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGL 370

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             +G  D A  + + M+                   V P+  ++ I+++ L  +GKL+ A
Sbjct: 371 FHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLEKA 414

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +F  M +     ++++Y  +I+G+C + ++++ ++L   +   G KP   T N+M   
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474

Query: 404 LCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA--------MEAFRFLTD 454
           LC ++ +  A  L++KM+  G  P    +NTL+   L    KA        M + RF+ D
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534

Query: 455 MVQEGFLPDIV 465
               G + +++
Sbjct: 535 ASTIGLVANML 545



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 1/212 (0%)

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+   LP I  ++  +  +  +K+ DL + L   +   G   ++  YNI+I+  C+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           ++ A  L  +M+  G  PS+ T + L+NG+C    I  A+  + +M+E     PD IT+T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFT 119

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TLI GL +  +  +A+ L + M ++GC PN +T+  ++ GLCK      A      M+  
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++ D+ +F  +I +     +   A  + KEM
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 294/618 (47%), Gaps = 24/618 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           L+R L   G V +A  L D+VK  G C+ P+   YN  ++   K+ +VD+      E++ 
Sbjct: 86  LVRALAREGQVADALALVDEVK--GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKA 143

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDK 153
            G   D  + T ++ V C +G+  +A  +F ++     V   + ++ +++ +   G  + 
Sbjct: 144 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFED 203

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+ER+ +     +  +F  ++    KK +VD+AL LF+ M K     +++ Y++II 
Sbjct: 204 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIID 262

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNT 271
            LC   ++E A ++  EM+ + + P+   ++ ++       +L    K  E    R  N 
Sbjct: 263 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +   S++  L   G +D+AY L + M+      D G           + N   +  +I
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKML------DAGH----------NANPVVYTSLI 366

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                 G+ +    +F+E+ + GC  ++ L N  +D +  +  +E+   +  ++   GF 
Sbjct: 367 RNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 426

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + + +   L +        N+   M+ QG     +    ++   CK GK  +A+  
Sbjct: 427 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 486

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M ++   P +  Y A + GL  I R+D A  LF +  + G   +VV Y+ +I G  K
Sbjct: 487 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 546

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  +  EM+ KGL P+V T+N L++   K+  I++A++C   M E +   P+  
Sbjct: 547 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC-PPNTY 605

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY+ LI+GLC   + + A + W +M+++G  PN +T+  +I+GL K      A   F   
Sbjct: 606 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 665

Query: 632 KEKGMKPDMFVFVALISA 649
           K  G  PD   F ALI  
Sbjct: 666 KANGGIPDAASFNALIEG 683



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 262/554 (47%), Gaps = 26/554 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +++L+ A ++    ++A EL+ +M +    +    F  L+    ++ +V  AL L D++
Sbjct: 47  AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
             S    D  +Y+V I    K   ++MA + + E+K  G+ PD   +  +  ++      
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRL 166

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------- 299
           GE   L  ++  +R V       N+++    S G  + AY LL+ +              
Sbjct: 167 GEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225

Query: 300 ----IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               +  +   D  + +  + K    PN+S+++III+ L   G+++ A  +  EM     
Sbjct: 226 ILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+   N ++D LC + +LEE+Y++     + G  P   T  S+   L ++  V  A  
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  KM   GH       T LI+    HG+  +  +   ++++ G  PD+   +  +  + 
Sbjct: 346 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVF 405

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               V+    +F DI ++G  PDV +Y+I+I GL KA +  E  ++F+ M  +G      
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            YN +++G+CKSG + +A   L  M EK    P V TY  ++DGL    R D+A ML+ E
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEK-CVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS--E 653
            + KG   N + + +LI G  K  R   A +    M +KG+ P+++ + +L+ A +   E
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584

Query: 654 LNPPLA-FEVLKEM 666
           +N  L  F+ +KEM
Sbjct: 585 INEALVCFQSMKEM 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/609 (25%), Positives = 289/609 (47%), Gaps = 29/609 (4%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+R  ++A    L  D VK  C + P  + +   I C G  G V+ A   F ++K +GL 
Sbjct: 90  LAREGQVADALALV-DEVKGSC-LEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGL- 146

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P++ SY  ++  LCK+  +   E    +M+        Y    ++  Y ++G+F+ A  
Sbjct: 147 KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 206

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +   + + G +   V F+ +L    K  +VD+A  L E M   +   N  T+ ++I    
Sbjct: 207 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLC 265

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              RV++A ++ D+M  +    +    ++++  LCK ++LE A +++      G  PD  
Sbjct: 266 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 325

Query: 242 ILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               LI     +G++    +  E   D   N   ++  S++R    +G  +  + + + +
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL 385

Query: 300 IKGEPIADVGV---------------EMLMIFKGTVS----PNTSSFDIIINTLLKDGKL 340
           I+     D+ +               +  MIF+   S    P+  S+ I+I+ L K G+ 
Sbjct: 386 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 445

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
               ++F  M Q G   +   YN ++DG C S ++ ++YE+L EM+E   +PT  T  ++
Sbjct: 446 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 505

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L +   +  A  L  + + +G E  V   + LI    K G+  EA+  L +M+++G 
Sbjct: 506 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 565

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P++  +++ +  L+  + ++ AL  F+ +    C P+   Y+I+I+GLC+ Q+  +A  
Sbjct: 566 TPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFV 625

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            + +M  +GL+P+V TY  +I+G  K GNI  A     R  +   G PD  ++  LI+G+
Sbjct: 626 FWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER-FKANGGIPDAASFNALIEGM 684

Query: 581 CIAGRPDDA 589
             A R  +A
Sbjct: 685 SNANRAMEA 693



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 182/373 (48%), Gaps = 2/373 (0%)

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +L  A+++   + D  + + ++ +    P  S++ ++I  L +  + + AL L R+M ++
Sbjct: 15  DLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEV 74

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G    V L+  L+  L    ++ ++  L+ E++ S  +P     N    C  +  +V  A
Sbjct: 75  GYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 134

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
                +++ QG +P     T +I  LCK G+  EA      M  E  +P    Y+  I G
Sbjct: 135 CKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 194

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                R + A +L   +   GC P VV++N I++ L K ++V EA  LF E++ K   P+
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPN 253

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
            +TYN++I+  C  G +++A   L  M E  S  P+++T   ++D LC A + ++A  ++
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEM-EHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
               ++GC P+ +T+ +LI GL K  +   A   F  M + G   +  V+ +LI  F   
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 654 LNPPLAFEVLKEM 666
                  +V KE+
Sbjct: 373 GRKEDGHKVFKEL 385



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 194/408 (47%), Gaps = 20/408 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  +F+   + G C P+  +Y  L++ L K   VD      ++M D G   +    T
Sbjct: 305 LEEAYKIFESASQRG-CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L++ +   G+ +    VF E+I  G   D  + +  +    K GEV+K   + E +   
Sbjct: 364 SLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 423

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               + +++ +LIHG  K  +  +   +F  M + GFA DA  Y+ ++ G CK+ ++  A
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            ++  EMK   + P       ++   +  D  +   ++ E  + + +    +L +S++  
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G ID+AY +L+ M+K               KG ++PN  +++ +++ L+K  +++ 
Sbjct: 544 FGKVGRIDEAYLILEEMMK---------------KG-LTPNVYTWNSLLDALVKAEEINE 587

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL  F+ M ++ C  N + Y+ LI+GLC   +  +++   ++M++ G  P   T  +M  
Sbjct: 588 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 647

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            L +  ++  A +L  + +  G  P       LI+ +    +AMEA++
Sbjct: 648 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 172/618 (27%), Positives = 287/618 (46%), Gaps = 55/618 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQV 110
           +F+ VK+E        +Y  ++E L      + +E  L E + +   G  +      ++ 
Sbjct: 26  IFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRN 85

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           Y   G+  +A+ VF E +D    +  V  ++ ++    ++   D+A ++  RM D  I  
Sbjct: 86  YGRKGKIQEAVDVF-ERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVP 144

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  TF + +  F + SR   A +L + M   G  S A  Y  +IGG  +      A +L+
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM G GI PD    +KLI +                                 L   G 
Sbjct: 205 EEMLGLGICPDIMAFNKLIHT---------------------------------LCRKGH 231

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + ++  LL  ++K               +G VSPN  + +I I    +   L+ A+ L  
Sbjct: 232 VQESERLLNKVLK---------------RG-VSPNLFTVNIFIQGFCQRAMLNEAIRLLD 275

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            + + G   +V  YN LI GLC + ++ E+   LR+M   G++P  FT NS+    C+  
Sbjct: 276 GVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLG 334

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A  ++R    +G  P       LI  LC+ G    A     + +++G  P++V  +
Sbjct: 335 MMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCN 394

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             + GL     +  AL+L  ++  +GC PD+  YN++I+GLCK   V++A++L  + I K
Sbjct: 395 TLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAK 454

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G +P V T+N LI+G+CK   +D A+  + RM      SPDVITY ++++GLC AG+ +D
Sbjct: 455 GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWN-HGVSPDVITYNSILNGLCKAGKYED 513

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            +  +  M EKGC PN IT+  L    CK  +   AL     M+ KG+ PD+  F  L+ 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 649 AFLSELNPPLAFEVLKEM 666
            F    +   A+++ K +
Sbjct: 574 GFCDNGDLDGAYQLFKRV 591



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 280/615 (45%), Gaps = 31/615 (5%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           +R  G  G ++EA  +F+++     C P+  SYN ++  L +    D        M+D G
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFN-CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D YT T  ++ +C + +   A  + N +   G     V +  ++  F +     +A 
Sbjct: 142 IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAH 201

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           EL E M    I  +   F  LIH   +K  V ++ +L +K+ K G + +    ++ I G 
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSD------EGELTLLVKEIWEDRD 268
           C+   L  A++L   + G G+TPD    + LI   C +      E  L  +V E +E   
Sbjct: 262 CQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDG 320

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                           +  SI   Y  L  M   + I   G      FKG V P+ S++ 
Sbjct: 321 F---------------TYNSIIDGYCKLGMMQNADQILRDGA-----FKGFV-PDESTYC 359

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +IN L +DG +D A+++F E  + G   N+ L N L+ GL     + ++ +L+ EM E+
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P  +T N +   LC+   V  A NLV     +GH P V     LI   CK  K   A
Sbjct: 420 GCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA 479

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              +  M   G  PD++ Y++ + GL    + +  +  F+ +   GC P+++ YNI+   
Sbjct: 480 IEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTES 539

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CKA++V EA +L  EM  KGL P V  +  L+ G+C +G++D A     R+ E+   S 
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSH 599

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
            + TY  +I+        + A  L+N+M E G +P+  T+  +I G CK     +     
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659

Query: 629 RMMKEKGMKPDMFVF 643
            +  EKG+ P +  F
Sbjct: 660 LVKIEKGLIPSLTTF 674



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 252/565 (44%), Gaps = 30/565 (5%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R  R    R L  ++    C  S  A   +I          EA+ LF+++   G+C P+ 
Sbjct: 158 RTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGIC-PDI 216

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            ++N L+  LC+   V   E  L ++   G   + +T+   +Q +C     ++A+ + + 
Sbjct: 217 MAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG 276

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +      D   ++ L+    K  +V +A   + +M +     +  T+  +I G+ K   +
Sbjct: 277 VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM 336

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A Q+       GF  D + Y  +I GLC++  ++ A+ +++E    G+ P+  + + L
Sbjct: 337 QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTL 396

Query: 247 ITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAM 299
           +   S +G   +   L+ E+ E+    D+ T  L+ N + +I    G +  A NL + A+
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI----GCVSDADNLVIDAI 452

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            KG                   P+  +F+ +I+   K  KLD A+ +   M   G   +V
Sbjct: 453 AKGH-----------------LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDV 495

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN++++GLC + + E+     + M E G  P   T N +    C+ + V  ALNL+ +
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLPDIVCYSAAIGGLIDIK 478
           M+ +G  P V +   L+K  C +G    A++    +  Q  F   I  Y+  I       
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +++A +LF  +C +G  PD   Y ++I G CK   +          I KGLIPS+ T+ 
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFG 675

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEK 563
            ++N  C    + +A+  +  M+ K
Sbjct: 676 RVLNCLCLKRRVHEAVGIIHLMVHK 700



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 227/505 (44%), Gaps = 29/505 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            ++ EA  L D V R GL  P+  +YN L+  LCK+  V   E  L++M + G+  D +T
Sbjct: 265 AMLNEAIRLLDGVGR-GL-TPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFT 322

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++  YC  G    A  +  +    G+V DE  +  L+    + G++D+A  +     
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM 382

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  ++ N      L+ G  ++  + +AL+L ++M+++G + D   Y+++I GLCK   + 
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
            A  L  +    G  PD    + LI     + +L     +V  +W +  V+   +  NSI
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW-NHGVSPDVITYNSI 501

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L   G  +                 +G   LM+ KG V PN  +++I+  +  K  K
Sbjct: 502 LNGLCKAGKYEDV---------------MGTFKLMMEKGCV-PNIITYNILTESFCKARK 545

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES-GFKPTHFTLN 398
           ++ AL+L  EM   G   +V  +  L+ G C++  L+ +Y+L + ++E   F  T  T N
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYN 605

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M      + ++  A  L  KM   G  P      ++I   CK G     + FL   +++
Sbjct: 606 IMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK 665

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G +P +  +   +  L   +RV  A+ +   +   G  P+VV  N I       + VA  
Sbjct: 666 GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV--NTIFEA--DKKEVAAP 721

Query: 519 EDLFNEMITKGLIPSVATYNLLING 543
           + +   ++ KG I   A Y +L +G
Sbjct: 722 KIVVENLMKKGHITYFA-YEILHDG 745


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 287/632 (45%), Gaps = 54/632 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++  G  G   +A  L   ++   LC P   SY+ +LE L       +      +M   
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G     +T   +++  C   + D A S+  ++  HG V +  V+  L+ A S+  +V +A
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E M       + +TF  +IHG  K +++  A +L D+M   GF  D   Y  ++ G
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+  +L  A ++  ++      P+  IL+ LI                           
Sbjct: 333 LCRIGKLNEARKILIKIP----CPNNAILNTLING------------------------- 363

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                    V +G + +A + L      E + + G +          P+  +++I+++ L
Sbjct: 364 --------YVMSGQLKEAQSFLN-----ETMINFGFQ----------PDIFTYNILMHGL 400

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K+G L  A  L  EM++ GC  NV  Y  L++GLC +  LEE+  +L EM   G     
Sbjct: 401 CKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINS 460

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
              N +   LCR++ V  ALNL+ +M  +G +P +     LI  LCK  +  EAFR   +
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+ +G + + V Y+  I  L+       AL L  D+   GC  D + YN +I   CK   
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +  +L+ +MI  GL     + N++ING CK G +D A   L   + +    PD++TY 
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYN 639

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           ++++GLC  GR  +A+ L++ ++ +G  P+  T+   I+  CK      A + F    E 
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIEN 699

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  P    +  L+   L + N    F VL E+
Sbjct: 700 GFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 231/534 (43%), Gaps = 27/534 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L     V+ A  L   + + G CVPN+  Y  L+ AL +   V      L+E
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M   G   D  T   ++   C   +   A  + + ++  G + D   +  LL    + G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK-MTKSGFASDAAMYD 209
           +++A +++ ++  C    N      LI+G+V   ++ +A    ++ M   GF  D   Y+
Sbjct: 339 LNEARKILIKI-PCP---NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWED 266
           +++ GLCK   L  A  L +EM   G  P+    + L+      G   E  L++ E+   
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEM-SA 453

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           R +   +++ N ++  L     +  A NLL  M                 KG   P+  +
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT---------------KGC-KPDLFT 497

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I  L K  ++D A  LF  M   G + N   YN LI  L      +++  L+ +M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G      T N + +  C+  ++   L L  +M + G         ++I  LCK GK  
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            AF FL D +  GF+PDIV Y++ + GL  + R+  AL LF  +   G  PD   YN  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           S  CK   V +A   F   I  G +PS  T+N+L+    K  N +     L  +
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 11/291 (3%)

Query: 380 ELLREMEESG--FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEPWVKHNTLLI 436
           +LL +M+E G  F+ + F +  + +   +      A+ L+  MR V   EP  K   L++
Sbjct: 133 KLLMQMKEEGIVFRESIFMI--IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVL 190

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + L        A     DM+ +G  P +  +   +  L     VD A  L RD+  HGC 
Sbjct: 191 EILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCV 250

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+ + Y  +I  L +  +V+EA  L  EM   G +P V T+N +I+G CK   I  A   
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           + RML +    PD +TY  L+ GLC  G+ ++A     ++  K   PN      LI G  
Sbjct: 311 VDRMLLR-GFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYV 365

Query: 617 KCDRPRAALVHF-RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              + + A       M   G +PD+F +  L+     E +   A +++ EM
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 22/404 (5%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           RI  L    + ++K  C  +   L  LI      G ++EA    ++        P+ ++Y
Sbjct: 335 RIGKLNEARKILIKIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+  LCK  S+      + EM   G   +  T   L+   C +G  ++A  V +E+  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  ++  +++ L+ A  +  +V  A  L+  M     + +  T+  LI+G  K  R+D+
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +LF  M   G  ++   Y+ +I  L +    + AL L ++M   G T D    + LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 249 SCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +    G +   + E++E   ++ +   T+ CN ++  L   G +D A+  L+  I     
Sbjct: 574 AFCKVGNIEKGL-ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN---- 628

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                      +G V P+  +++ ++N L K G++  AL+LF  +   G   + F YN  
Sbjct: 629 -----------RGFV-PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF 676

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           I   C    + ++        E+GF P++ T N +   L ++ +
Sbjct: 677 ISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 1/188 (0%)

Query: 480 VDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           V   LE+F  +    G C     Y + I+ L    +    + L  +M  +G++   + + 
Sbjct: 92  VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM 151

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +++  + K+G   QA+  L  M       P   +Y  +++ L     P  A  ++ +M  
Sbjct: 152 IIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS 211

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +P   TF  ++  LC  +   +A    R M + G  P+  V+  LI A   +     
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 659 AFEVLKEM 666
           A ++L+EM
Sbjct: 272 ALKLLEEM 279


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 276/591 (46%), Gaps = 21/591 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+ Y+Y+  +EA CK+   D  +   +EM+      ++ T   ++   C SG  ++A  
Sbjct: 240 LPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 299

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              E++D+G   D   +  L+    K   + +A  L++ M    ++ N   +  L+ GF+
Sbjct: 300 FKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFM 359

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +  +A  +  +M  +G   +  MYD +I GLCK  QL  A +L  EM   G+ PD  
Sbjct: 360 KEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTF 419

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI--LVSNGSIDQAYNLLQAM 299
             + L+     + +     + + E R+   +  + +  + I  L  NG   +A NLL+ M
Sbjct: 420 TYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I                   + PN   +  +I    K+G + LA     +MT+     ++
Sbjct: 480 I----------------SEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDL 523

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F YN+LI GL    R+EE+ E   ++++ G  P  FT + +    C+  ++  A  L+R+
Sbjct: 524 FCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G +P     T L++   K     +    L  M+  G  PD   Y   I  L   + 
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +++A  +  ++  +G  PD+  Y+ +ISGLCK   + +A  L +EM  +GL P +  YN 
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI+G+C+SG+I +A      +L K    P+ +TYT LIDG C  G   DA  L+ EM ++
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAK-GLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDR 762

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G AP+   +  L TG         AL     M  +G   ++ +F  L+  F
Sbjct: 763 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGF 812



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 290/631 (45%), Gaps = 22/631 (3%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           +AR     + + +++ +  C M+      +I  L   G VEEA    +++   GL  P+ 
Sbjct: 255 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS-PDA 313

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++Y  L+  LCK   +   +  L EM   G   +      L+  +   G+  +A  +  E
Sbjct: 314 FTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKE 373

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +I  G     + +  L+    K G++ +A +L++ M    +R +  T+  L+ G  ++  
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHD 433

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
            D A +L ++M  SG   +   Y ++I GLC+N + + A  L  EM   G+ P+  + + 
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMT-LLC-NSIMRILVSNGSIDQAYNLLQAMIKGE 303
           LI   S EG ++L  + + +    N    L C NS+++ L + G +++A      + K  
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK-- 551

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +G V P+  ++  +I+   K G L+ A  L R+M   G   N   Y 
Sbjct: 552 -------------RGLV-PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +L++G   SN  E+   +L+ M  SG KP +     + R L R +++  A  ++ ++   
Sbjct: 598 DLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +   + LI  LCK     +A   L +M +EG  P IVCY+A I G      +  A
Sbjct: 658 GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 717

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             +F  I A G  P+ V Y  +I G CK   + +A DL+ EM+ +G+ P    YN+L  G
Sbjct: 718 RNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG 777

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
              + +++QA+     M  +  G  +V  + TL+ G C  G+  +   L + M ++   P
Sbjct: 778 CSDAADLEQALFLTEEMFNR--GYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVP 835

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           N  T   +++   K  +   A   F  +++K
Sbjct: 836 NAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 279/625 (44%), Gaps = 23/625 (3%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L  L+      G V  A  +   +   GL  P     N LL+ L ++ +++L+   
Sbjct: 172 STAVLDVLVDTYKKTGSVRNAAQVVLMMADLGL-APTRRCCNGLLKDLLRADAMELLWKL 230

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSK 147
              M+  G   D YT +  ++ +C +  FD A  VF E+      ++E  +++++    +
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G V++A    E M D  +  +  T+  L++G  K SR+ +A  L D+M+ SG   +  +
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIW 264
           Y  ++ G  K  +   A  +  EM  +G+ P+  +   LI      G+L   + L+KE+ 
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           +   +   T   N +M+        D A+ LL  M                    + PN 
Sbjct: 411 K-VGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM----------------RNSGILPNV 453

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+ I+IN L ++G+   A +L  EM   G   N F+Y  LI G      +  + E L +
Sbjct: 454 YSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEK 513

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M ++   P  F  NS+ + L     +  A     +++ +G  P     + LI   CK G 
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A + L  M+  G  P+   Y+  + G       +    + + +   G  PD   Y I
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I  L +++ +  A  +  E+   GL+P +  Y+ LI+G CK  ++++A+  L  M  KE
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM-AKE 692

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P ++ Y  LIDG C +G    A  +++ +  KG  PN +T+ ALI G CK      A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 625 LVHFRMMKEKGMKPDMFVFVALISA 649
              ++ M ++G+ PD FV+  L + 
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATG 777



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 247/534 (46%), Gaps = 61/534 (11%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           VL+  + K   V  A Q+   M   G A      + ++  L +   +E+  +L   M+G+
Sbjct: 178 VLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGA 237

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQ 291
           GI PD    S  I +     +     K+++E+   RD     +  N ++  L  +G++++
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDA-AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296

Query: 292 AYNLLQAMIKGEPIADV---GVEMLMIFKGT----------------VSPNTSSFDIIIN 332
           A+   + M+      D    G  M  + KG+                + PN   +  +++
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
             +K+GK   A  + +EM   G   N  +Y+NLI GLC   +L  + +LL+EM + G +P
Sbjct: 357 GFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRP 416

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             FT N + +   ++ D  GA  L+ +MR  G  P V    ++I  LC++G++ EA   L
Sbjct: 417 DTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLL 476

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+ EG  P+   Y+  I G      + LA E    +      PD+  YN +I GL   
Sbjct: 477 EEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTV 536

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVI 571
            R+ EAE+ + ++  +GL+P   TY+ LI+G+CK+GN+++A   L +ML   SG  P+  
Sbjct: 537 GRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML--NSGLKPNAD 594

Query: 572 TYTTLIDG-----------------LCIAGRPDD------------------AIMLWNEM 596
           TYT L++G                 L    +PD+                  A M+  E+
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           E+ G  P+   + +LI+GLCK      A+     M ++G++P +  + ALI  F
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 708



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 164/348 (47%), Gaps = 1/348 (0%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           + SP+T+  D++++T  K G +  A  +   M  +G        N L+  L  ++ +E  
Sbjct: 168 SPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELL 227

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           ++L   ME +G  P  +T ++     C+ +D   A  +  +MR +          ++I  
Sbjct: 228 WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LC+ G   EAF F  +MV  G  PD   Y A + GL    R+  A  L  ++   G  P+
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V Y  ++ G  K  + AEA D+  EMI+ G+ P+   Y+ LI G CK G + +A   L 
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M+ K    PD  TY  L+ G       D A  L NEM   G  PN  ++  +I GLC+ 
Sbjct: 408 EMI-KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              + A      M  +G+KP+ F++  LI     E N  LA E L++M
Sbjct: 467 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 1/162 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +  A  +FD +  +GL VPN  +Y  L++  CK+  +       KEM D G   D + 
Sbjct: 712 GDISRARNVFDSILAKGL-VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFV 770

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
              L     ++   ++AL +  E+ + G+ +  +F+ L+  F K G++ +  +L+  M D
Sbjct: 771 YNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMD 830

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
             I  N +T   ++  F K  ++ +A ++F ++ +   +  A
Sbjct: 831 REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSA 872


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 286/626 (45%), Gaps = 55/626 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQDYGWGYDK 101
           VG V++A  +  ++  +G C PN  +YN ++  LC++  +D  +E++ + M D G   D 
Sbjct: 228 VGNVKDAKRVLLEMGEKG-CSPNLVTYNVIIGGLCRARLLDEAIELK-RSMVDKGLVPDL 285

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
           YT   L+  +C   +  +A  +  E+ID G   E + ++ L+  F + G++++A  + + 
Sbjct: 286 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 345

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M  C I  N   +  L++G  K  +++KAL++  +M + G   D+  Y ++I G C+ + 
Sbjct: 346 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 405

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +  A +L  EMK   + P     S +I      G L                    N+I+
Sbjct: 406 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG-----------------TNAIL 448

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R +V NG                                + PN   +  ++    K+G++
Sbjct: 449 REMVMNG--------------------------------LKPNAVVYTTLMTAHAKEGRV 476

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + +  +   M + G + +VF YN+LI G C + R+EE+   L EM E   +P   T  + 
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 536

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                +  ++  A     +M   G  P V   T LI+  CK G   EAF     ++    
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           L D+  YS  I GL    ++  A  +F ++   G  P+   YN +ISG CK   V +A  
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L  EM  KG+ P + TYN+LI+G CK+G I++A   L   +E    +P+ +TY  ++DG 
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK-NLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C +  P  A  L  EM  +G  P+   +  ++   CK ++   AL  F+ M EKG    +
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV 775

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             F  LI  +        A  +L+EM
Sbjct: 776 -SFNTLIEGYCKSGKLQEANHLLEEM 800



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 249/532 (46%), Gaps = 54/532 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  +I    K   V  A ++  +M + G + +   Y+VIIGGLC+ + L+ A++L   M
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM 276

Query: 232 KGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
              G+ PD      LI     E    E  L++ E+  D  +    +  N+++   +  G 
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI-DVGLKPEPITYNALIDGFMRQGD 335

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           I+QA+      IK E +A  G+E  +I           ++ ++N + K GK++ AL + +
Sbjct: 336 IEQAFR-----IKDEMVA-CGIEANLII----------WNTLLNGVCKAGKMEKALEIMQ 379

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + G   +   Y+ LI+G C    +  ++ELL EM++    PT  T + +   LCR  
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           ++ G   ++R+M + G +P     T L+    K G+  E+   L  M ++G LPD+ CY+
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I G    KR++ A     ++      P+   Y   I G  KA  +  A+  FNEM++ 
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAM----LCLSRM------------------------ 560
           G++P+V  Y  LI G CK GN+ +A       LSR                         
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 561 ------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                 L+++   P+  TY +LI G C  G  D A  L  EM  KG  P+ +T+  LI G
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LCK      A   F  ++ +G+ P+   + A++  +    NP  AF++L+EM
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 180/715 (25%), Positives = 303/715 (42%), Gaps = 97/715 (13%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           L++EA  L   +  +GL VP+ Y+Y+ L+   C        ++ L EM D G   +  T 
Sbjct: 265 LLDEAIELKRSMVDKGL-VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             L+  +   G  ++A  + +E++  G   +  +++ LL    K G+++KA E+++ M +
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  + +T+ +LI G  +   + +A +L D+M K   A     Y VII GLC+   L+ 
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMR 281
              +  EM  +G+ P+  + + L+T+ + EG  E + ++ E   ++ +       NS++ 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 282 ILVSNGSIDQAYNLLQAMIK--------------------GE-PIADVGV-EMLMIFKGT 319
                  +++A   L  M++                    GE  IAD    EML      
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---G 560

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN   +  +I    K+G +  A S+FR +     +Q+V  Y+ LI GL  + ++ E++
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAF 620

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +  E++E G  P  FT NS+    C++ +V  A  L+ +M ++G  P +    +LI  L
Sbjct: 621 GIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A     D+   G  P+ V Y+A + G    K    A +L  ++   G  PD 
Sbjct: 681 CKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 740

Query: 500 VAYNII----------------------------------ISGLCKAQRVAEAEDLFNEM 525
             YN+I                                  I G CK+ ++ EA  L  EM
Sbjct: 741 FIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEM 800

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK---------------------- 563
           I K  IP+  TY  LI+  CK+G + +A      M E+                      
Sbjct: 801 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 860

Query: 564 ------------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                       +   PD +TY  +ID  C  G   +A  L +E+  KG   +   + AL
Sbjct: 861 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDAL 920

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I  LCK +     L     + E G +  +     +   F    N   A EVL+ M
Sbjct: 921 IQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 267/597 (44%), Gaps = 69/597 (11%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A+ +  L+      G VEE+ M+ ++++ +G+ +P+ + YN L+   CK+  ++  
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI-LPDVFCYNSLIIGFCKAKRMEEA 514

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
              L EM +     + +T    +  Y  +G+ + A   FNE++  G + +  +++ L+  
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G V +A  +   +    +  + +T+ VLIHG  +  ++ +A  +F ++ + G   +
Sbjct: 575 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A  Y+ +I G CK   ++ A QL  EM   GI PD    + LI      GE+    K ++
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER-AKNLF 693

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG-----EPIADVGVEMLMIFKGT 319
           +D +   +T  C +                   AM+ G      P A   +   M+ +G 
Sbjct: 694 DDIEGRGLTPNCVT-----------------YAAMVDGYCKSKNPTAAFQLLEEMLLRG- 735

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+   +++I+N   K+ K + AL LF+EM + G    V  +N LI+G C S +L+E+ 
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEAN 794

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL EM E  F P H T  S+                            + HN       
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSL----------------------------IDHN------- 819

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G   EA R   +M +   +P    Y++ + G  +I  +     LF ++ A G  PD 
Sbjct: 820 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y ++I   C+   V EA  L +E++ KG+  SVA Y+ LI   CK     + +  L+ 
Sbjct: 880 MTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNE 939

Query: 560 MLEK--ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           + E     G P   T + +  G  IAG  D+A  +   M + G   N  +   L+ G
Sbjct: 940 IGESGFRLGLP---TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 177/345 (51%), Gaps = 5/345 (1%)

Query: 310 VEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
           VE + +F G  +    P+  S + ++  LLK  K++L   +F  M     + +V+ Y N+
Sbjct: 162 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 221

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I   C    ++++  +L EM E G  P   T N +   LCR + +  A+ L R M  +G 
Sbjct: 222 ISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGL 281

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +    +LI   C   ++ EA   L +M+  G  P+ + Y+A I G +    ++ A  
Sbjct: 282 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 341

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +  ++ A G   +++ +N +++G+CKA ++ +A ++  EM+ KG+ P   TY+LLI G C
Sbjct: 342 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 401

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +  N+ +A   L  M +K   +P V+TY+ +I+GLC  G       +  EM   G  PN 
Sbjct: 402 RGQNMARAFELLDEM-KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 460

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + +  L+T   K  R   + +    M+E+G+ PD+F + +LI  F
Sbjct: 461 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 63/388 (16%)

Query: 322 PNTSSFDIIINTLLKD--GKLDLALSLF----REMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           P   + DII + +L++  G     L+ F     +M      Q++ + + L   LCNSN  
Sbjct: 49  PKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWY 108

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL--NLVRKMRVQGHEPWVKHNT 433
             + +L++                   C+ R  D   A+  ++V+  R     P      
Sbjct: 109 GPASDLIK-------------------CIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFD 149

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+    K G  +EA           F P ++  ++ +G L+   +V+L  ++F  +CAH
Sbjct: 150 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 209

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              PDV  Y  +IS  CK   V +A+ +  EM  KG  P++ TYN++I G C++  +D+A
Sbjct: 210 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA 269

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI- 612
           +     M++K    PD+ TY  LI+G C+  R  +A ++  EM + G  P  IT+ ALI 
Sbjct: 270 IELKRSMVDK-GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 328

Query: 613 ----------------------------------TGLCKCDRPRAALVHFRMMKEKGMKP 638
                                              G+CK  +   AL   + M EKG++P
Sbjct: 329 GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP 388

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   +  LI       N   AFE+L EM
Sbjct: 389 DSQTYSLLIEGHCRGQNMARAFELLDEM 416


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 184/680 (27%), Positives = 303/680 (44%), Gaps = 49/680 (7%)

Query: 18  AQDVVKS--RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           AQ++ K   +  + P  + +  LI  L   G +  A   FD +  +G C PN  +YN L+
Sbjct: 260 AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG-CFPNVVTYNTLI 318

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
              CKS  V+      + M   G   D +T   L+  YC  G+   A  +F+ ++  G  
Sbjct: 319 NGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVT 378

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            + +   ILL      GE+  A      M      L    + ++IHG  K  +V++A +L
Sbjct: 379 PDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWEL 438

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F ++   G   DA  Y ++I GLCKN     A +L+  MK  GI    E           
Sbjct: 439 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE----------- 487

Query: 253 EGELTLLVKEIWEDRDVNTMTLL-CNSIMRILVSNGSIDQAYN---LLQAMIKGEPIAD- 307
           +G L     E   +  V+  T++ C    R ++ +G +   Y+   L  +++   PIA  
Sbjct: 488 DGHL----GEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASS 543

Query: 308 ------VGVEMLMIFKGTVSPNTSSFDII---------------INTLLKDGKLDLALSL 346
                 V   +L++ +G  +P + SF                  + + L   K D A  L
Sbjct: 544 SSVKGFVRRHLLLLERGN-NPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGL 602

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM Q   + ++  +  ++  +   N+ +    L  +ME  G     ++   +  C CR
Sbjct: 603 FCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCR 662

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 AL L+ KM   G +P +     L+   C+  +  EA   +  M + G  P++V 
Sbjct: 663 CSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVI 722

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I GL   + ++ ALE+F  +   G   D V YN +ISGLC + R  +A  L  +M+
Sbjct: 723 YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            + + P+V  +  LI+ + K GN+ +A      M+ + S  P+++TY +LI+G CI GR 
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRR-SVHPNILTYNSLINGFCIQGRL 841

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            DA  +++ M  KGC P+ +T+  LITG CK  R    +  F  M  +G+  D F +  L
Sbjct: 842 GDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTL 901

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I  +       +A +V   M
Sbjct: 902 IHGYCQAGKLNVAQKVFNRM 921



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 175/329 (53%), Gaps = 1/329 (0%)

Query: 322  PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            P+  +   ++N   +  +   A+SL   M ++G   NV +YN +I+GLC +  L  + E+
Sbjct: 683  PSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEI 742

Query: 382  LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
               ME+ G      T N++   LC       A  L+R M  +  +P V   T LI    K
Sbjct: 743  FYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 802

Query: 442  HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             G  +EA     +M++    P+I+ Y++ I G     R+  A  +F  + + GC PDVV 
Sbjct: 803  EGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVT 862

Query: 502  YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            YN +I+G CK++RV +   LF EM  +GL+    TYN LI+G+C++G ++ A    +RM+
Sbjct: 863  YNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 922

Query: 562  EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            +     PD++TY  L+D LC  G+ + A+++  ++++     + IT+  +I G+C+ D+ 
Sbjct: 923  DC-GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKV 981

Query: 622  RAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + A   FR +  KG+K D   ++ +IS  
Sbjct: 982  KEAWCLFRSLTRKGVKLDAIAYITMISGL 1010



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 216/486 (44%), Gaps = 50/486 (10%)

Query: 173  FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
            F  ++    K ++ D  + LF KM   G + D   + ++I   C+  +  +AL L  +M 
Sbjct: 618  FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677

Query: 233  GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
              G  P    L  L+                                           +A
Sbjct: 678  KLGFQPSIVTLGSLLNG---------------------------------FCQGNRFQEA 704

Query: 293  YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             +L+ +M      A++G+E          PN   ++ +IN L K+  L+ AL +F  M +
Sbjct: 705  VSLVDSM------AELGLE----------PNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748

Query: 353  IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
             G + +   YN LI GLCNS R  ++  LLR+M +    P      ++     +  +++ 
Sbjct: 749  KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 808

Query: 413  ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
            A NL ++M  +   P +     LI   C  G+  +A      MV +G  PD+V Y+  I 
Sbjct: 809  AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868

Query: 473  GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            G    KRV+  ++LF ++   G   D   YN +I G C+A ++  A+ +FN M+  G+ P
Sbjct: 869  GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPP 928

Query: 533  SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
             + TYN+L++  C +G I++A++ +   L+K     D+ITY  +I G+C   +  +A  L
Sbjct: 929  DIVTYNILLDCLCNNGKIEKALVMVED-LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCL 987

Query: 593  WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            +  +  KG   + I ++ +I+GLC+    R A      MKE G  P   ++   +    +
Sbjct: 988  FRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYT 1047

Query: 653  ELNPPL 658
             L+  L
Sbjct: 1048 SLSAEL 1053



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 167/698 (23%), Positives = 286/698 (40%), Gaps = 124/698 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI CL   G V  A  L ++++++G    +  +YN LL  LC S         L++M   
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D +T T L+  +   G  D+A  ++ +++        V ++ L+      G +  A
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA 295

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +  + M       N  T+  LI+GF K  RV+  ++LF +M + G   D   Y+ +I G
Sbjct: 296 KKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHG 355

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C+  +L +A  ++S M   G+TPD      +IT C                        
Sbjct: 356 YCQVGKLRVAKDIFSWMVSCGVTPD------IITHC------------------------ 385

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
               ++  L  NG I  A      M  GE            + G V     +++I+I+ L
Sbjct: 386 ---ILLHGLCVNGEIGSAMVKFNDMRSGEK-----------YLGIV-----AYNIMIHGL 426

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF---- 390
            K  K++ A  LF  +   G   +   Y  +I GLC +    E+ EL R M+E G     
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486

Query: 391 ---------KPTHFTLNSMFRCLCRRQDV-------------------VGALNLVRKMRV 422
                         +L ++  C  RR+ +                   VG + +     V
Sbjct: 487 EDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSV 546

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRF------------------------------- 451
           +G   +V+ + LL++     G   E+  F                               
Sbjct: 547 KG---FVRRHLLLLER----GNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDA 599

Query: 452 ---LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                +M+Q   +P IV ++  +  +  + + D+ + LF  +   G   D+ ++ I+I  
Sbjct: 600 FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            C+  R + A  L  +M+  G  PS+ T   L+NG+C+     +A+  +  M E     P
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL-GLEP 718

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +V+ Y T+I+GLC     ++A+ ++  ME+KG   + +T+  LI+GLC   R   A    
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M ++ + P++  F ALI  F+ E N   A  + KEM
Sbjct: 779 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 181/364 (49%), Gaps = 37/364 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +S +  SF I+I+   +  +L LALS+  +M ++G   ++  + +L+ G C  NR+ +++
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLIK 437
            L+  M +SG++P     N++  CLC+  DV  AL L+ +M  +G      V +NTLL  
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC  G+  +A R L DM +    PD+  ++A I   +    +D A EL++ +      P
Sbjct: 216 -LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           + V YN +I+GLC   R+  A+  F+ M +KG  P+V TYN LING+CKS  ++  M   
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 558 SRMLEK-----------------ESG-----------------SPDVITYTTLIDGLCIA 583
            RM  +                 + G                 +PD+IT+  L+ GLC+ 
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G    A++ +N+M         + +  +I GLCK D+   A   F  +  +G+KPD   +
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 644 VALI 647
             +I
Sbjct: 455 TIMI 458



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 221/463 (47%), Gaps = 24/463 (5%)

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF+   R + AL LF +M +S        +  ++  +   ++ E  +    +M+  GI+ 
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 239 D---FEILSKLITSCSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D   F IL      CS     L++L K +    D + +T    S++        I  A++
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTF--GSLLHGFCLRNRIHDAFS 156

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+ +M+K       G E          PN   ++ +I+ L K+G +++AL L  EM + G
Sbjct: 157 LVASMVKS------GYE----------PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200

Query: 355 CMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            +  ++  YN L+ GLC S    ++  +LR+M +    P  FT  ++     ++ ++  A
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L ++M      P       LI  LC HG+   A +    M  +G  P++V Y+  I G
Sbjct: 261 QELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLING 320

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
               +RV+  ++LF+ +   G   D   YN +I G C+  ++  A+D+F+ M++ G+ P 
Sbjct: 321 FCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPD 380

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + T+ +L++G C +G I  AM+  + M   E     ++ Y  +I GLC A + ++A  L+
Sbjct: 381 IITHCILLHGLCVNGEIGSAMVKFNDMRSGEK-YLGIVAYNIMIHGLCKADKVEEAWELF 439

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
             +  +G  P+  T+  +I GLCK    R A   FR MKE G+
Sbjct: 440 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 162/688 (23%), Positives = 277/688 (40%), Gaps = 113/688 (16%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L S+   +  ++  + V+ + L  P+   +  LL A+      + V    ++M+ +G  +
Sbjct: 41  LHSIRFEDALDLFLEMVQSQPL--PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D Y+ T L+  +C   +   ALS+  +++  G+    V                      
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIV---------------------- 136

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       TF  L+HGF  ++R+  A  L   M KSG+  +  +Y+ +I  LCKN 
Sbjct: 137 ------------TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNG 184

Query: 220 QLEMALQLYSEMKGSG-ITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLC 276
            + +AL+L +EM+  G +  D    + L+T     GE     + + +   R +N      
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            +++   V  G++D+A  L + M+                + ++ PNT +++ +IN L  
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQML----------------QSSIGPNTVTYNSLINGLCM 288

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+L  A   F  M   GC  NV  YN LI+G C S R+E+  +L + M   G     FT
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++    C+   +  A ++   M   G  P +  + +L+  LC +G+   A     DM 
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR 408

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
                  IV Y+  I GL    +V+ A ELF  +   G  PD   Y I+I GLCK     
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE-KESGS-----PDV 570
           EA++LF  M   G+I      +L  +G     ++   ++C  R     ESG       D 
Sbjct: 469 EADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDT 528

Query: 571 ITYTTLIDGLCIAG---------------------------------------------- 584
             +++L+  + IA                                               
Sbjct: 529 TLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLR 588

Query: 585 ------RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                 + DDA  L+ EM +    P+ + F  ++T + K ++    +  F  M+  G+  
Sbjct: 589 SELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D++ F  LI  F       LA  +L +M
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKM 676



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 211/478 (44%), Gaps = 52/478 (10%)

Query: 63   VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            +P+   +  +L A+ K    D+V     +M++ G  +D Y+ T L+  +C   +F  AL+
Sbjct: 612  IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALA 671

Query: 123  VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +  +++  G+    V                                  T   L++GF +
Sbjct: 672  LLGKMMKLGFQPSIV----------------------------------TLGSLLNGFCQ 697

Query: 183  KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +R  +A+ L D M + G   +  +Y+ +I GLCKN+ L  AL+++  M+  GI  D   
Sbjct: 698  GNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVT 757

Query: 243  LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             + LI+   + G  T   + + +   R ++   +   +++   V  G++ +A NL + MI
Sbjct: 758  YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI 817

Query: 301  KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                            + +V PN  +++ +IN     G+L  A  +F  M   GC  +V 
Sbjct: 818  ----------------RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVV 861

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             YN LI G C S R+E+  +L  EM   G     FT N++    C+   +  A  +  +M
Sbjct: 862  TYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
               G  P +    +L+  LC +GK  +A   + D+ +     DI+ Y+  I G+    +V
Sbjct: 922  VDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKV 981

Query: 481  DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
              A  LFR +   G   D +AY  +ISGLC+     EA+ L   M   G +PS   Y+
Sbjct: 982  KEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 213/466 (45%), Gaps = 19/466 (4%)

Query: 116  QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
            +FD A  +F E++    +   V F+ +L A +K  + D    L  +M++  I  +  +F 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 175  VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +LIH F + SR   AL L  KM K GF         ++ G C+  + + A+ L   M   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 235  GITPDFEILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            G+ P+  I + +I       +L   ++  +  E + +    +  N+++  L ++G    A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 293  YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
              LL+ M+K +                + PN   F  +I+T +K+G L  A +L++EM +
Sbjct: 775  ARLLRDMVKRK----------------IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 353  IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                 N+  YN+LI+G C   RL ++  +   M   G  P   T N++    C+ + V  
Sbjct: 819  RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878

Query: 413  ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
             + L  +M  QG          LI   C+ GK   A +    MV  G  PDIV Y+  + 
Sbjct: 879  GMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938

Query: 473  GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
             L +  +++ AL +  D+  +    D++ YNIII G+C+  +V EA  LF  +  KG+  
Sbjct: 939  CLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKL 998

Query: 533  SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
                Y  +I+G C++G   +A    +RM E      + I   TL D
Sbjct: 999  DAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRD 1044



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 212/460 (46%), Gaps = 22/460 (4%)

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           + +S +F+ AL +F E++    +   V F+ LL A +     +      ++M+   I  +
Sbjct: 40  FLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             +F +LIH F + SR+  AL +  KM K G+      +  ++ G C   ++  A  L +
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            M  SG  P+  + + LI      G++ +   L+ E+ +   +    +  N+++  L  +
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G   QA  +L+ M K                  ++P+  +F  +I+  +K G LD A  L
Sbjct: 220 GEWRQAARILRDMTKRR----------------INPDVFTFTALIDAFVKQGNLDEAQEL 263

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           +++M Q     N   YN+LI+GLC   RL  + +    M   G  P   T N++    C+
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            + V   + L ++M  +G          LI   C+ GK   A    + MV  G  PDI+ 
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   + GL     +  A+  F D+ +      +VAYNI+I GLCKA +V EA +LF  + 
Sbjct: 384 HCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLP 443

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            +G+ P   TY ++I G CK+G   +A     RM  KE G
Sbjct: 444 VEGVKPDARTYTIMILGLCKNGPRREADELFRRM--KEDG 481



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 11/227 (4%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G + +A  +FD +  +G C P+  +YN L+   CKS  V+       EM   G   D +T
Sbjct: 839  GRLGDAKHMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
               L+  YC +G+ + A  VFN ++D G   + V ++ILL      G+++KA  ++E + 
Sbjct: 898  YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               + ++  T+ ++I G  +  +V +A  LF  +T+ G   DA  Y  +I GLC+N    
Sbjct: 958  KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017

Query: 223  MALQLYSEMKGSGITPDFEILSKLI----TSCSDEGELTLLVKEIWE 265
             A +L + MK  G  P   I  + +    TS S E     L+K + E
Sbjct: 1018 EADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAE-----LIKAVHE 1059



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%)

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G   + R  +A DLF EM+    +PSV  +  L+          + ++  S+ +E    
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRY-ETVIYFSQQMELFGI 96

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           S D+ ++T LI   C   R   A+ +  +M + G  P+ +TF +L+ G C  +R   A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               M + G +P++ V+  LI       +  +A E+L EM
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 237/487 (48%), Gaps = 18/487 (3%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            V+   +++  +  + M   G   D      +I G C+  +   A ++   ++GSG  PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + +I+     GE+   +  + +   V+   +  N+I+R L  +G + QA  +L  M
Sbjct: 172 VITYNVMISGYCKAGEINNAL-SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++ +                  P+  ++ I+I    +D  +  A+ L  EM   GC  +V
Sbjct: 231 LQRD----------------CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L++G+C   RL+E+ + L +M  SG +P   T N + R +C     + A  L+  
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P V    +LI  LC+ G    A   L  M Q G  P+ + Y+  + G    K+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+E    + + GC PD+V YN +++ LCK  +V +A ++ N++ +KG  P + TYN 
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G  K+G   +A+  L  M  K+   PD ITY++L+ GL   G+ D+AI  ++E E  
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  PN +TF +++ GLCK  +   A+     M  +G KP+   +  LI     E     A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573

Query: 660 FEVLKEM 666
            E+L E+
Sbjct: 574 LELLNEL 580



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 22/478 (4%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
           L+ M  +G   D    T L++ +C  G+  KA  +   +   G V D   +++++  + K
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            GE++ A  +++RM   ++  +  T+  ++       ++ +A+++ D+M +     D   
Sbjct: 185 AGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
           Y ++I   C++  +  A++L  EM+  G TPD    + L+     EG L   +K + +  
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                   +  N I+R + S G    A  LL  M++               KG  SP+  
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR---------------KG-FSPSVV 345

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+I+IN L + G L  A+ +  +M Q GC  N   YN L+ G C   +++ + E L  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P   T N+M   LC+   V  A+ ++ ++  +G  P +     +I  L K GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A + L +M  +   PD + YS+ +GGL    +VD A++ F +    G  P+ V +N I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           + GLCK+++   A D    MI +G  P+  +Y +LI G    G   +A+  L+ +  K
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 39/339 (11%)

Query: 363 NNLIDGLCNSNRLEESYELLREM-----------------------------------EE 387
           NN +  +  +  LEE ++ L  M                                   E 
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           SG  P   T N M    C+  ++  AL+++ +M V      V +NT+L + LC  GK  +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--PDVVTYNTIL-RSLCDSGKLKQ 222

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L  M+Q    PD++ Y+  I        V  A++L  ++   GC PDVV YN++++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G+CK  R+ EA    N+M + G  P+V T+N+++   C +G    A   L+ ML K   S
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFS 341

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P V+T+  LI+ LC  G    AI +  +M + GC PN +++  L+ G CK  +   A+ +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M  +G  PD+  +  +++A   +     A E+L ++
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 2/168 (1%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G VE+A  + +Q+  +G C P   +YN +++ L K+         L EM+      D  T
Sbjct: 428 GKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + L+      G+ D+A+  F+E    G     V F+ +++   K  + D+A + +  M 
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +   + NE ++ +LI G   +    +AL+L +++   G    ++   V
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 171/610 (28%), Positives = 276/610 (45%), Gaps = 35/610 (5%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  +FD++ R G    + Y  N  L  + +      V  R   M   G G     +TP
Sbjct: 37  EDARHVFDELLRRGRGA-SIYGLNRALADVARHSPAAAVS-RYNRMARAGAG----KVTP 90

Query: 107 LLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
            +  Y       C +G+ D   +    ++  G+ VD   F+ LL           A +++
Sbjct: 91  TVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIV 150

Query: 159 -ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK---SGFASDAAMYDVIIGG 214
             RM +     +  ++  L+ G   ++R  +AL+L   M      G   D   Y+ ++ G
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-T 273
             K    + A   Y EM   GI PD    S +I +         L K    D+ +  + T
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA---------LCKAQAMDKAMEVLNT 261

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M   ++  SI   Y        G+P   +G    M   G V PN  ++  ++N 
Sbjct: 262 MVKNGVMPDCMTYNSILHGY-----CSSGQPKEAIGTLKKMRSDG-VEPNVVTYSSLMNY 315

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G   ++  Y  L+ G      L E + LL  M  +G +P 
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H   N +     +++ V  A+ +  KMR  G  P V     +I  LCK G   +A  +  
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ EG  P+I+ Y++ I GL    + D A EL  ++   G C + + +N II   CK  
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TYN LI+G C +G +D+A   L+ M+      PD++TY
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV-GVKPDIVTY 554

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R DDA+ L+ EM   G +PN IT+  ++ GL    R  AA   +  + +
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 615 SGTQLELSTY 624



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 295/637 (46%), Gaps = 65/637 (10%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+P+ +SYN LL+ LC ++ S + +E+      D G G   D  +   +L  +   G  D
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D G + + V +S ++ A  K   +DKA E++  M    +  +  T+  ++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   +   Y  ++  LCKN +   A +++  M   G+ 
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYNL 295
           PD      L+   + +G L  +                 ++++ ++V NG       +N+
Sbjct: 339 PDIATYRTLLQGYATKGALVEM-----------------HALLDLMVRNGIQPDHHVFNI 381

Query: 296 LQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  A  K E +    +    + +  ++PN   +  +I+ L K G +D A+  F +M   G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N+ +Y +LI GLC  ++ +++ EL+ EM + G        NS+    C+   V+ + 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L   M   G +P +     LI   C  GK  EA + L  MV  G  PDIV Y   I G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             + R+D AL LF+++ + G  P+++ YNII+ GL   +R A A++L+  +   G    +
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 535 ATYNLLINGWCKSGNIDQAM-----LCLSRM-LEKESGS--------------------- 567
           +TYN++++G CK+   D+A+     LCL+ + LE  + +                     
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 568 -------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCD 619
                  PDV TY+ + + L   G  ++   L+  MEE GC+ +     +++  L  + D
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             RA    F M+ EK      F   A  ++FL E +P
Sbjct: 742 ITRAGTYLF-MIDEK-----HFSLEASTASFLLESSP 772



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 224/533 (42%), Gaps = 87/533 (16%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI    +  R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G  PD    + L+    DE                                     
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENR---------------------------------SQ 180

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL  M       D G        G   P+  S++ ++N   K+G  D A S + EM
Sbjct: 181 EALELLHMMAD-----DRG--------GGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEM 227

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + +V  Y+++I  LC +  ++++ E+L  M ++G  P   T NS+    C     
Sbjct: 228 LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 287

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+  ++KMR  G EP V   + L+  LCK+G++ EA +    M + G  PDI  Y   
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + G      +     L   +  +G  PD   +NI+I    K ++V +A  +F++M   GL
Sbjct: 348 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V  Y  +I+  CKSG++D AML   +M++ E  +P++I YT+LI GLC   + D A 
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID-EGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 591 MLWNEMEEKG-----------------------------------CAPNRITFMALITGL 615
            L  EM ++G                                     P+ IT+  LI G 
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLAFEVLKEM 666
           C   +   A      M   G+KPD+  +  LI+ +  +S ++  LA    KEM
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL--FKEM 577



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 41/317 (12%)

Query: 343 ALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           A+S +  M + G  +    V  Y  LI   C + RL+  +  L  + + GF+    T   
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + + LC  +    A+++V                                  L  M + G
Sbjct: 133 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELG 158

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +PD+  Y+  + GL D  R   ALEL     D    G  PDVV+YN +++G  K     
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A   ++EM+ +G++P V TY+ +I   CK+  +D+AM  L+ M+ K    PD +TY ++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV-KNGVMPDCMTYNSI 277

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C +G+P +AI    +M   G  PN +T+ +L+  LCK  R   A   F  M ++G+
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 637 KPDMFVFVALISAFLSE 653
           +PD+  +  L+  + ++
Sbjct: 338 EPDIATYRTLLQGYATK 354



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 51/381 (13%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G +I  L   G V++A + F+Q+  EGL  PN   Y  L+  LC     D  E  + EM 
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVD 152
           D G   +      ++  +C  G+  ++  +F+ ++  G   D   ++ L+      G++D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L+  M    ++ +  T+  LI+G+ + SR+D AL LF +M  SG + +   Y++I+
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            GL   ++   A +LY  +  SG   +                                 
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTY----------------------------- 624

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N I+  L  N   D+A  + Q +     + D+ +E            T +F+I+I 
Sbjct: 625 ----NIILHGLCKNNLTDEALRMFQNLC----LTDLQLE------------TRTFNIMIG 664

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            LLK G++D A  LF   +  G + +V  Y+ + + L     LEE  +L   MEE+G   
Sbjct: 665 ALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSA 724

Query: 393 THFTLNSMFRCLCRRQDVVGA 413
               LNS+ R L +R D+  A
Sbjct: 725 DSRMLNSIVRKLLQRGDITRA 745



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 7/237 (2%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P +  Y+  IG      R+DL      ++  
Sbjct: 62  LADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVK 120

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G   D + +  ++ GLC  +R ++A D+    M   G IP V +YN L+ G C      
Sbjct: 121 KGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQ 180

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +A+  L  M +   G   PDV++Y T+++G    G  D A   ++EM ++G  P+ +T+ 
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ PD   + +++  + S   P  A   LK+M
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 279/603 (46%), Gaps = 36/603 (5%)

Query: 59  EGLCVPNN-YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           EG  +P + Y+Y+  LEA CK+   D  +   +EM+      ++ T   ++   C SG  
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 118 DKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           ++A     E++D+G   D   +  L+    K G + +A  L++ M    ++ N   +  L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           + GF+K+ +  +A  + ++M  +G   +  MYD +I GLCK  QL  A +L +EM   G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 237 TPD----FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS-----IMRILVSNG 287
            PD      ++         +G   LL        ++    +L N+     ++  L  NG
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELL-------NEMRNSGILPNAYTYGIMINGLCQNG 469

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +A NLL+ MI                   + PN   +  +I    K+G + LA    
Sbjct: 470 ESKEAGNLLEEMISE----------------GLKPNAFMYAPLIIGHSKEGHISLACESL 513

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             MT+   + ++F YN+LI GL    R+EE+ E   ++++ G  P  FT + +    C+ 
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +++  A  L+++M   G +P     T L++   K     +    L  M+  G  PD   Y
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
              I  L   + +++A  +  ++  +G  PD+  Y+ +ISGLCK   + +A  L +EM  
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAK 693

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +GL P +  YN LI+G+C+SG+I +A      +L K    P+ +TYT LIDG C  G   
Sbjct: 694 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK-GLLPNCVTYTALIDGNCKNGDIT 752

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           DA  L+ +M ++G AP+   +  L TG         AL     M  +G    + +F  L+
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLV 811

Query: 648 SAF 650
             F
Sbjct: 812 RGF 814



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/617 (26%), Positives = 282/617 (45%), Gaps = 22/617 (3%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           +AR     + + +++ +  C M+      +I  L   G VEEA    +++   GL  P+ 
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS-PDA 315

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++Y  L+  LCK   +   +  L EM   G   +      L+  +   G+  +A  + NE
Sbjct: 316 FTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNE 375

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +I  G     + +  L+    K G++ +A +L+  M     R +  T+  L+ G  +   
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
            D A +L ++M  SG   +A  Y ++I GLC+N + + A  L  EM   G+ P+  + + 
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMT-LLC-NSIMRILVSNGSIDQAYNLLQAMIKGE 303
           LI   S EG ++L  + +      N +  L C NS+++ L + G I++A      + K  
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK-- 553

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +G V P+  ++  +I+   K   L+ A  L ++M   G   N   Y 
Sbjct: 554 -------------RGLV-PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +L++G   SN  E+   +L+ M  SG KP +     + R L R +++  A  ++ ++   
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +   + LI  LCK     +A   L +M +EG  P IVCY+A I G      +  A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             +F  I A G  P+ V Y  +I G CK   + +A DL+ +M+ +G+ P    YN+L  G
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
              + +++QA+     M  +  G   V  ++TL+ G C  GR  +   L + M ++   P
Sbjct: 780 CSDAADLEQALFLTEEMFNR--GYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVP 837

Query: 604 NRITFMALITGLCKCDR 620
           N  T   +IT   K  +
Sbjct: 838 NAQTVENVITEFGKAGK 854



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 228/526 (43%), Gaps = 87/526 (16%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M+   I  +  T+   +    K    D A ++F++M +   A +   Y+V+I GLC++  
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +E A     EM   G++PD                                      ++M
Sbjct: 296 VEEAFGFKEEMVDYGLSPD---------------------------------AFTYGALM 322

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G + +A  LL  M                    + PN   +  +++  +K+GK 
Sbjct: 323 NGLCKGGRLKEAKALLDEMSCS----------------GLKPNVVVYATLVDGFMKEGKA 366

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  +  EM   G   N  +Y+NLI GLC   +L  + +LL EM + G +P  FT + +
Sbjct: 367 AEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPL 426

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            +   +  D  GA  L+ +MR  G  P      ++I  LC++G++ EA   L +M+ EG 
Sbjct: 427 MQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGL 486

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P+   Y+  I G      + LA E   ++      PD+  YN +I GL    R+ EAE+
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDG 579
            + ++  +GL+P   TY+ LI+G+CK+ N+++A   L +ML   SG  P+  TYT L++G
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML--NSGLKPNADTYTDLLEG 604

Query: 580 -----------------LCIAGRPDD------------------AIMLWNEMEEKGCAPN 604
                            L    +PD+                  A M+  E+E+ G  P+
Sbjct: 605 YFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 664

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              + +LI+GLCK      A+     M ++G++P +  + ALI  F
Sbjct: 665 LHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 1/343 (0%)

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T+  D++++T  K+G +  A  +   M  +G        N L+  L  ++ +E  ++L  
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            ME +G  P  +T ++     C+ +D   A  +  +MR +          ++I  LC+ G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EAF F  +MV  G  PD   Y A + GL    R+  A  L  ++   G  P+VV Y 
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ G  K  + AEA D+ NEMI+ G+ P+   Y+ LI G CK G + +A   L+ M+ K
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI-K 413

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PD  TY  L+ G       D A  L NEM   G  PN  T+  +I GLC+    + 
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE 473

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A      M  +G+KP+ F++  LI     E +  LA E L+ M
Sbjct: 474 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 265/550 (48%), Gaps = 24/550 (4%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   D Y  T L++  C  G+   A  V       G  VD   ++ L+  + ++G +D A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             LI  M    +  +  T+  LI     + RV  AL L D M + G   +   Y V++  
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           +CKN   E A+ +  EM+  G TP+    + +I     EG        + + RD      
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR-------VDDARD------ 233

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L N +        ++     LL+ +   +   DV      + +    PN  +FD++I   
Sbjct: 234 LLNRLFSYGCQPDTVSYT-TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G ++ A+ + ++MT+  C  N  L N +I+ +C   R++++++ L  M   G  P  
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDT 352

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLT 453
            +  ++ + LCR +    A  L+++M      P  V  NT +   LC+ G   +A   + 
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI-LCQKGLIEQAIMLIE 411

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M + G    +V Y+A + G      +D ALELFR +    C P+ + Y  +++GLC A+
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAE 468

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+  A +L  EM+ +   P+V T+N+L+N +C+ G +D+A+  + +M+E    +P++ITY
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME-HGCTPNLITY 527

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TL DG+      +DA+ L + +  KG +P+ ITF ++I  L K DR   A+  F + ++
Sbjct: 528 NTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQD 587

Query: 634 KGMKPDMFVF 643
            GM+P   V+
Sbjct: 588 IGMRPKALVY 597



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 281/619 (45%), Gaps = 58/619 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +  G  V + ++YN L+   C+   +D     +  M   
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPV-DVFAYNTLVAGYCRYGHLDAARRLIGSMP-- 137

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TPL++V C+ G+   ALS+ ++++  G     V +++LL A  K    ++A
Sbjct: 138 -VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M       N  T+ V+I+G  ++ RVD A  L +++   G   D   Y  ++ G
Sbjct: 197 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKG 256

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC +K+ +   +L++EM      P+               E+T                 
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPN---------------EVTF---------------- 285

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +LQ M + E                 + NT+  +I+IN++
Sbjct: 286 --DMLIRFFCRGGMVERAIQVLQQMTEHE----------------CATNTTLCNIVINSI 327

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R  ++ ELL+EM  +   P  
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++  +  A+ L+ +M+  G    V     L+   C  G    A      
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M  +   P+ + Y+  + GL + +R+D A EL  ++    C P+VV +N++++  C+   
Sbjct: 448 MPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA +L  +M+  G  P++ TYN L +G  K  + + A+  L  ++ K   SPDVIT++
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVSPDVITFS 563

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           ++I  L    R ++AI +++  ++ G  P  + +  ++ GLCK      A+     M   
Sbjct: 564 SIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSN 623

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P+   ++ LI     E
Sbjct: 624 GCMPNESTYIILIEGLARE 642



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 221/493 (44%), Gaps = 31/493 (6%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI    ++ R   A ++      SG   D   Y+ ++ G C+   L+ A +L   M    
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP--- 137

Query: 236 ITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + PD    + LI    D G     L+LL   +      N +T     ++  +  N   +Q
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY--TVLLEAMCKNSGFEQ 195

Query: 292 AYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           A  +L  M  KG                  +PN  ++++IIN + ++G++D A  L   +
Sbjct: 196 AMAVLDEMRAKG-----------------CTPNIVTYNVIINGMCREGRVDDARDLLNRL 238

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +   Y  L+ GLC S R ++  EL  EM E    P   T + + R  CR   V
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 298

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ ++++M             ++I  +CK G+  +AF+FL +M   G  PD + Y+  
Sbjct: 299 ERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTV 358

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL   +R + A EL +++  + C P+ V +N  I  LC+   + +A  L  +M   G 
Sbjct: 359 LKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGC 418

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              V TYN L+NG+C  G+ID A+     M  K    P+ ITYTTL+ GLC A R D A 
Sbjct: 419 TVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDAAA 474

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  EM  + C PN +TF  L+   C+      A+     M E G  P++  +  L    
Sbjct: 475 ELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534

Query: 651 LSELNPPLAFEVL 663
             + +   A E+L
Sbjct: 535 TKDCSSEDALELL 547



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 265/555 (47%), Gaps = 37/555 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A  +  LIR L   G V +A  L D + R G C PN  +Y  LLEA+CK+   +  
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG-CQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL-- 142
              L EM+  G   +  T   ++   C  G+ D A  + N +  +G   + V ++ LL  
Sbjct: 197 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKG 256

Query: 143 -VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
             A  +W +V+   EL   M + N   NE TF +LI  F +   V++A+Q+  +MT+   
Sbjct: 257 LCASKRWDDVE---ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTL 258
           A++  + +++I  +CK  +++ A +  + M   G  PD   +  + K +       +   
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 259 LVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
           L+KE+  +    N +T   N+ + IL   G I+QA  L++ M   E    VGV       
Sbjct: 374 LLKEMVRNNCPPNEVTF--NTFICILCQKGLIEQAIMLIEQM--QEHGCTVGV------- 422

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                   +++ ++N     G +D AL LFR M    C  N   Y  L+ GLCN+ RL+ 
Sbjct: 423 -------VTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDA 472

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLI 436
           + EL+ EM      P   T N +    C++  +  A+ LV +M   G  P  + +NTL  
Sbjct: 473 AAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF- 531

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             + K   + +A   L  +V +G  PD++ +S+ IG L    RV+ A+++F      G  
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P  + YN I+ GLCK   +  A D    M++ G +P+ +TY +LI G  + G + +A   
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651

Query: 557 LSRMLEKESGSPDVI 571
           LS +  +   S ++I
Sbjct: 652 LSMLCSRGVVSKNLI 666



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 220/502 (43%), Gaps = 58/502 (11%)

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL-L 275
           K   L  A     E       P    L +LI      G   L+  E+   RD     + L
Sbjct: 20  KPHHLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAARLV--ELSASRDGEAPDVYL 77

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEML---------------MIFKGT 319
           C  ++R L   G    A  +L+A    G P+       L               +I    
Sbjct: 78  CTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP 137

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+P+  ++  +I  L   G++  ALSL  +M + GC  NV  Y  L++ +C ++  E++ 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L EM   G  P   T N +   +CR   V  A +L+ ++   G +P     T L+K L
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI-----GGLIDIK---------------- 478
           C   +  +      +M+++  +P+ V +   I     GG+++                  
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 479 --------------RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                         RVD A +   ++ ++GC PD ++Y  ++ GLC+A+R  +A++L  E
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+     P+  T+N  I   C+ G I+QA++ + +M ++   +  V+TY  L++G C+ G
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM-QEHGCTVGVVTYNALVNGFCVQG 436

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D A+ L+  M    C PN IT+  L+TGLC  +R  AA      M  +   P++  F 
Sbjct: 437 HIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFN 493

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L++ F  +     A E++++M
Sbjct: 494 VLVNFFCQKGFLDEAIELVEQM 515



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/458 (21%), Positives = 193/458 (42%), Gaps = 54/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  ++R   +  L  ++++  C  +      LIR     G+VE A  +  Q+  E  C  
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT-EHECAT 315

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++ ++CK   VD     L  M  YG   D  + T +L+  C + +++ A  + 
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++ +    +E  F+  +    + G +++A  LIE+M +    +   T+  L++GF  +
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D AL+LF  M       +   Y  ++ GLC  ++L+ A +L +EM            
Sbjct: 436 GHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM------------ 480

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                              +  D   N +T   N ++      G +D+A  L++ M+   
Sbjct: 481 -------------------LHRDCPPNVVTF--NVLVNFFCQKGFLDEAIELVEQMM--- 516

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +   +PN  +++ + + + KD   + AL L   +   G   +V  ++
Sbjct: 517 -------------EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFS 563

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++I  L   +R+EE+ ++    ++ G +P     N +   LC+R ++  A++ +  M   
Sbjct: 564 SIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSN 623

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P      +LI+ L + G   EA   L+ +   G +
Sbjct: 624 GCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 161/583 (27%), Positives = 270/583 (46%), Gaps = 54/583 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++  G  GL  +A  L   +     C P   SYN +L+ L       +      +M  
Sbjct: 139 LIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLS 198

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G     YT   +++  C   + D A S+  ++  HG V   V +  L+ A  +   V +
Sbjct: 199 RGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSE 258

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+E M       + +TF  +IHG  +  R+ +A +L D+M   GF++DA  Y  ++ 
Sbjct: 259 ALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMH 318

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC+  Q++ A  L +++                                      N  T
Sbjct: 319 GLCRMGQVDEARALLNKIP-------------------------------------NPNT 341

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +L N+++   V++G  ++A +LL                 M+  G   P+  +F+I+I+ 
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNN--------------MVIAG-YEPDAYTFNIMIDG 386

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L+K G L  AL L  EM       NV  Y  LI+G C   RLEE+ E++  M   G    
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N +   LC+  ++  AL L  +M  +G +P +     LI  LCK+ K  EA     
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM  EG + + V Y+  +   +    +  A +L  ++   GC  D + YN +I  LCK  
Sbjct: 507 DMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            V +   LF EM+ KG+ P++ + N+LI+G C++G ++ A+  L  M+ +   +PD++TY
Sbjct: 567 AVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR-GLTPDIVTY 625

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +LI+GLC  G   +A  L+N+++ +G  P+ IT+  LI+  C
Sbjct: 626 NSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 249/515 (48%), Gaps = 25/515 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L  V  V+ A  L   + + G CVPN+  Y  L+ ALC++  V      L++
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHG-CVPNSVIYQTLIHALCENNRVSEALQLLED 265

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M       D  T   ++   C +G+  +A  + + ++  G+  D   +  L+    + G+
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL-FDKMTKSGFASDAAMYD 209
           VD+A  L+ ++ + N  L    +  LI G+V   R ++A  L ++ M  +G+  DA  ++
Sbjct: 326 VDEARALLNKIPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDR 267
           ++I GL K   L  AL+L +EM      P+    + LI     +G L    + +     +
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            ++  T+  N ++  L  +G+I++A  L      GE          M  KG   P+  +F
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLF-----GE----------MSGKG-CKPDIYTF 485

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +IN L K+ K++ ALSL+ +M   G + N   YN L+      + ++++++L+ EM  
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G    + T N + + LC+   V   L L  +M  +G  P +    +LI  LC+ GK  +
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVND 605

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +FL DM+  G  PDIV Y++ I GL  +  V  A  LF  + + G  PD + YN +IS
Sbjct: 606 ALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             C      +A  L  + +  G IP+  T+++LIN
Sbjct: 666 RHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 231/517 (44%), Gaps = 88/517 (17%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF V++      S VD A  L   M K G   ++ +Y  +I  LC+N ++  ALQL  +M
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                          +  C               + DV T     N ++  L   G I +
Sbjct: 267 --------------FLMCC---------------EPDVQTF----NDVIHGLCRAGRIHE 293

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M+                +G  S +  ++  +++ L + G++D A +L  ++ 
Sbjct: 294 AAKLLDRML---------------LRG-FSTDALTYGYLMHGLCRMGQVDEARALLNKIP 337

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNSMFRCLCRRQDV 410
                 N  LYN LI G   S R EE+ +LL   M  +G++P  +T N M   L ++  +
Sbjct: 338 N----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           V AL L+ +M  +  EP V   T+LI   CK G+  EA   +  M  +G   + V Y+  
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L     ++ AL+LF ++   GC PD+  +N +I+GLCK  ++ EA  L+++M  +G+
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513

Query: 531 IPSVATYNLLINGWCKSGNIDQAM------------------------LCLSRMLEKESG 566
           I +  TYN L++ +    +I QA                         LC +  +EK  G
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573

Query: 567 ----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
                      P +I+   LI GLC  G+ +DA+    +M  +G  P+ +T+ +LI GLC
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           K    + A   F  ++ +G++PD   +  LIS    E
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHE 670



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 216/440 (49%), Gaps = 14/440 (3%)

Query: 235 GITPDFEILSKLITSCSDEGEL------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           G   DF+++ KL+    DEG L       L++K   +       T L   +  +   + +
Sbjct: 110 GAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPT 169

Query: 289 IDQAYNLLQAMIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                 +L  ++ G+ P     V   M+ +G VSP   +F +++  L    ++D A SL 
Sbjct: 170 FKSYNVVLDILVDGDCPRVAPNVFYDMLSRG-VSPTVYTFGVVMKALCMVSEVDSACSLL 228

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R+M + GC+ N  +Y  LI  LC +NR+ E+ +LL +M     +P   T N +   LCR 
Sbjct: 229 RDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRA 288

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A  L+ +M ++G          L+  LC+ G+  EA   L  +      P+ V Y
Sbjct: 289 GRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLY 344

Query: 468 SAAIGGLIDIKRVDLALEL-FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +  I G +   R + A +L + ++   G  PD   +NI+I GL K   +  A +L NEM+
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            K   P+V TY +LING+CK G +++A   ++ M  K   S + + Y  LI  LC  G  
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK-GLSLNTVGYNCLICALCKDGNI 463

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           ++A+ L+ EM  KGC P+  TF +LI GLCK  +   AL  +  M  +G+  +   +  L
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           + AFL   +   AF+++ EM
Sbjct: 524 VHAFLMRDSIQQAFKLVDEM 543



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 214/448 (47%), Gaps = 33/448 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G + EA  L D++   G    +  +Y  L+  LC+   VD     L ++ + 
Sbjct: 281 VIHGLCRAGRIHEAAKLLDRMLLRGFST-DALTYGYLMHGLCRMGQVDEARALLNKIPNP 339

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSV-FNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
               +      L+  Y  SG+F++A  + +N ++  G+  D + F+I++    K G +  
Sbjct: 340 ----NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVS 395

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL+  M       N  T+ +LI+GF K+ R+++A ++ + M+  G + +   Y+ +I 
Sbjct: 396 ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLIC 455

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSD---EGELTLLVKEIWEDRDV 269
            LCK+  +E ALQL+ EM G G  PD    + LI   C +   E  L+L      E    
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           NT+T   N+++   +   SI QA+ L+  M+ +G P+ ++                 +++
Sbjct: 516 NTVTY--NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNI-----------------TYN 556

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L K G ++  L LF EM   G    +   N LI GLC + ++ ++ + L++M   
Sbjct: 557 GLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR 616

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAME 447
           G  P   T NS+   LC+   V  A NL  K++ +G  P  + +NTL+ +  C  G   +
Sbjct: 617 GLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH-CHEGMFND 675

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           A   L   V  GF+P+ V +S  I  ++
Sbjct: 676 ACLLLYKGVDSGFIPNEVTWSILINYIV 703


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 249/541 (46%), Gaps = 51/541 (9%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDH-GWVDEHVFSILLVAFSKWGEVDKACELI 158
           + YTL  ++  YC S +FDKA +V +E+     + D    ++L+ A  + G+VD A  L+
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + M +  ++    TF  ++ G  K  R DKA ++F  M +   A D   ++++IGG C+ 
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            ++E A++ Y EM+  G+TPD    S LI                               
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIG------------------------------ 305

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
              +  + G +D A   L+ M KG  +   GV   M+  G                 + G
Sbjct: 306 ---LFSTRGKMDHAAAYLREM-KGLGLVPDGVIYTMVIGG---------------FCRAG 346

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  AL +  EM  +GC+ +V  YN L++GLC  +RL ++ ELL EM+E G  P   T  
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    CR  +   AL L   +  Q   P V     LI  +C+ G   +A     DM   
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              P+ V YS  I    +  +V+ A     ++ + G  P+++ YN II G C++  V + 
Sbjct: 467 EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG 526

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +    +M+   ++P + T+N LI+G+ K  N+  A    + ++EKE   PD +TY  +I+
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN-IMEKEMVQPDAVTYNMIIN 585

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G    G  ++A  ++ +M   G  P+R T+M+LI G       + A      M  +G  P
Sbjct: 586 GFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645

Query: 639 D 639
           D
Sbjct: 646 D 646



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 253/534 (47%), Gaps = 50/534 (9%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+ +  +I++ ++ K  E DKA  +I  M+   +  +  T  VLI    +   VD A+ L
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
            D M   G       ++ ++ GLCK+++ + A +++  M    + PD             
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD------------- 261

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                           V +  +L     R+    G +++A    + M +           
Sbjct: 262 ----------------VRSFNILIGGFCRV----GEVEEAMKFYKEMQQ----------- 290

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +G V+P+  SF  +I      GK+D A +  REM  +G + +  +Y  +I G C +
Sbjct: 291 ----RG-VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRA 345

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             + E+  +  EM   G  P   T N++   LC++  ++ A  L+ +M+ +G  P +   
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI   C+ G   +A +    ++ +   PD+V Y++ I G+     +  A EL+ D+ A
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHA 465

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P+ V Y+I+I   C+  +V EA    +EM++KG +P++ TYN +I G+C+SGN+ +
Sbjct: 466 REIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKK 525

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               L +M++ ++  PD+IT+ TLI G         A  ++N ME++   P+ +T+  +I
Sbjct: 526 GQQFLQKMMQ-DNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G  +      A   F+ M   G++PD + +++LI+  ++  N   AF++  EM
Sbjct: 585 NGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 204/472 (43%), Gaps = 32/472 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G V+ A  L D +  +GL  P   ++N +L+ LCK    D  +   + M   
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGL-KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQC 256

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D  +   L+  +C  G+ ++A+  + E+   G   + V FS L+  FS  G++D A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA 316

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              +  M    +  +   + ++I GF +   + +AL++ D+M   G   D   Y+ ++ G
Sbjct: 317 AAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNG 376

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--------TLLVKEIWED 266
           LCK  +L  A +L +EMK  G+TPD    + LI     +G          TLL + +  D
Sbjct: 377 LCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  +  NS++  +   G + +A  L   M   E                + PN  +
Sbjct: 437 ------VVAYNSLIDGMCRKGDLAKANELWDDMHARE----------------IFPNHVT 474

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + I+I++  + G+++ A     EM   G + N+  YN++I G C S  +++  + L++M 
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           +    P   T N++     + +++ GA N+   M  +  +P      ++I    + G   
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           EA R    M   G  PD   Y + I G +       A +L  ++   G  PD
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 270/578 (46%), Gaps = 21/578 (3%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           + + G    K T   LL     + +F K    F+ +      D ++F+  + AF K G+V
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 289

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           ++A +L  +M++  +  N  TF  +I G     R D+A    +KM + G       Y ++
Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
           + GL + K++  A  +  EM   G  P+  + + LI S  + G L   + +K++   + +
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           +  +   N++++    NG  D A  LL+ M+       +G  +          N  SF  
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEML------SIGFNV----------NQGSFTS 453

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L      D AL    EM          L   LI GLC   +  ++ EL  +    G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEA 448
           F     T N++   LC    +  A  + +++  +G     V +NT LI   C   K  EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT-LISGCCGKKKLDEA 572

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F FL +MV+ G  PD   YS  I GL ++ +V+ A++ + D   +G  PDV  Y+++I G
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CKA+R  E ++ F+EM++K + P+   YN LI  +C+SG +  A L L   ++ +  SP
Sbjct: 633 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA-LELREDMKHKGISP 691

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +  TYT+LI G+ I  R ++A +L+ EM  +G  PN   + ALI G  K  +        
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M  K + P+   +  +I  +  + N   A  +L EM
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 258/575 (44%), Gaps = 52/575 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G VEEA  LF +++  G+  PN  ++N +++ L      D   M  ++M + G      T
Sbjct: 287 GKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 345

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
            + L++    + +   A  V  E+   G+     V++ L+ +F + G ++KA E+ + M 
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + L   T+  LI G+ K  + D A +L  +M   GF  +   +  +I  LC +   +
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL+   EM    ++P   +L+ LI+     G+ +  + E+W                  
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW------------------ 506

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                         Q + KG  +                 +T + + +++ L + GKLD 
Sbjct: 507 -------------FQFLNKGFVV-----------------DTRTSNALLHGLCEAGKLDE 536

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  + +E+   GC+ +   YN LI G C   +L+E++  L EM + G KP ++T + +  
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L     V  A+      +  G  P V   +++I   CK  +  E   F  +M+ +   P
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V Y+  I       R+ +ALEL  D+   G  P+   Y  +I G+    RV EA+ LF
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  +GL P+V  Y  LI+G+ K G + +   CL R +  ++  P+ ITYT +I G   
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE-CLLREMHSKNVHPNKITYTVMIGGYAR 775

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            G   +A  L NEM EKG  P+ IT+   I G  K
Sbjct: 776 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 221/545 (40%), Gaps = 65/545 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+RA+RI     + +++ K      P  + +  LI      G + +A  + D +  +GL 
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKG--FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           + ++ +YN L++  CK+   D  E  LKEM   G+  ++ + T ++ + C+   FD AL 
Sbjct: 411 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              E++         + + L+    K G+  KA EL  +  +    ++ +T   L+HG  
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++D+A ++  ++   G   D   Y+ +I G C  K+L+ A     EM   G+ PD  
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI    +  ++   + + W+D   N M                             
Sbjct: 590 TYSILICGLFNMNKVEEAI-QFWDDCKRNGML---------------------------- 620

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  ++ ++I+   K  + +     F EM       N  +
Sbjct: 621 --------------------PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 660

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI   C S RL  + EL  +M+  G  P   T  S+ + +     V  A  L  +MR
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G EP V H T LI    K G+ ++    L +M  +   P+ + Y+  IGG      V 
Sbjct: 721 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 780

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  L  ++   G  PD + Y   I G  K   V EA    +E            Y  +I
Sbjct: 781 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE----------ENYAAII 830

Query: 542 NGWCK 546
            GW K
Sbjct: 831 EGWNK 835



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           LAL++F  +   G  P     NI+++ L +A    +  + F +++ KG+ P V  +   I
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 280

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           N +CK G +++A+   S+M E+   +P+V+T+ T+IDGL + GR D+A M   +M E+G 
Sbjct: 281 NAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  IT+  L+ GL +  R   A    + M +KG  P++ V+  LI +F+   +   A E
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399

Query: 662 V 662
           +
Sbjct: 400 I 400



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A D+F  +  KG+ PS  T N+L+    ++    +   C +  +  +  SPDV  +TT I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC--CEAFDVVCKGVSPDVYLFTTAI 280

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +  C  G+ ++A+ L+++MEE G APN +TF  +I GL  C R   A +    M E+GM+
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  +  L+           A+ VLKEM
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEM 369


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 172/611 (28%), Positives = 281/611 (45%), Gaps = 70/611 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y YN LL +  K   VD V    K+M   G   + YT   L+ + C+SG  D A  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+++ + G   +E+ F IL+  + + G   K  EL+  M       N+  +  LI  F K
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + + D A +L D+M K G + D   ++  I  LC + ++  A +++ +M+          
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ---------- 188

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                            + E+      N +T   N ++      G +++A  L + M   
Sbjct: 189 -----------------IDEVLGLPQPNIITY--NLMLGGFCKEGMLEEARALFEKMKVS 229

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           E +                 N  S++I +  L++ GKL  A  + +EM  +G   NV+ Y
Sbjct: 230 ENLM----------------NRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSY 273

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N ++DGLC +  L ++  L+R M  SG  P   T  ++    C    V  A N++R+M  
Sbjct: 274 NIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMR 333

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P      +L+  L K G+  EA   L  M ++G++ D V  +  I GL +  ++D 
Sbjct: 334 DGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDK 393

Query: 483 ALELFRDICAHG-----------------------CCPDVVAYNIIISGLCKAQRVAEAE 519
           A+E+   +  HG                       C PD+++Y+ IISGLCKA RV EA+
Sbjct: 394 AIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAK 453

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             F EM+ K L P  A Y++ I+ +CK G I  A   L  M EK+  +  + TY +LI G
Sbjct: 454 KKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM-EKKGCNKTLQTYNSLIMG 512

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L    +  +   L +EM E+G +P+   +  +++ LC+  R + A      M +KG+ P+
Sbjct: 513 LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPN 572

Query: 640 MFVFVALISAF 650
           +  F  LI AF
Sbjct: 573 ISSFSILIKAF 583



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 154/667 (23%), Positives = 281/667 (42%), Gaps = 117/667 (17%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R L   + +  C  +  + G L+R     G   +   L  +++R G   PN   YN L+ 
Sbjct: 76  RELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS-PNKVVYNTLIS 134

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF-----NEIID 129
           + CK    D  E  + EM+  G   D  T    +   C+SG+  +A  +F     +E++ 
Sbjct: 135 SFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLG 194

Query: 130 HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
               +   ++++L  F K G +++A  L E+M      +N +++ + + G V+  ++ +A
Sbjct: 195 LPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEA 254

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             +  +M   G   +   Y++++ GLCKN  L  A  L   M  SG+ PD          
Sbjct: 255 QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPD---------- 304

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                                  T+   +++      G + +A N+L+ M++        
Sbjct: 305 -----------------------TVTYTTLLHGYCHTGKVSEANNVLREMMRD------- 334

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                      SPN  + +I++ +L K+G++  A  L ++M + G + +    N +IDGL
Sbjct: 335 ---------GCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385

Query: 370 CNSNRLEESYELLREMEESGFK-----------------------PTHFTLNSMFRCLCR 406
           CN+ +L+++ E++  M   G                         P   + +++   LC+
Sbjct: 386 CNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCK 445

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A     +M  +  +P      + I   CK GK   AFR L DM ++G    +  
Sbjct: 446 AGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQT 505

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y++ I GL    ++     L  ++   G  PDV  YN ++S LC+  RV +A  + +EM+
Sbjct: 506 YNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565

Query: 527 TKGLIPSVATYNLLINGWCKS----------------------------------GNIDQ 552
            KG+ P+++++++LI  +CK+                                  G + +
Sbjct: 566 QKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVK 625

Query: 553 AMLCLSRMLEKESGSPDV--ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           A       L++   S DV    Y  LID LC   + DDA  + +++ +KG   +  +FM 
Sbjct: 626 AKELFETALDR---SFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMP 682

Query: 611 LITGLCK 617
           +I GL K
Sbjct: 683 VIDGLGK 689



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 178/385 (46%), Gaps = 42/385 (10%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   +++++ +  K+G++D    L ++M   G     + +N LI  LC+S  L+++ EL
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELC 440
             +M E G +P  ++   + R  CR       L L+ +MR  G  P  V +NTL I   C
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTL-ISSFC 137

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC---- 496
           K GK  +A + + +M ++G  PD+V ++A I  L    +V  A  +FRD+          
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLF---------------------------------- 522
           P+++ YN+++ G CK   + EA  LF                                  
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 523 -NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             EM+  G+ P+V +YN++++G CK+G +  A + L R++      PD +TYTTL+ G C
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM-LMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G+  +A  +  EM   GC+PN  T   L+  L K  R   A    + M EKG   D  
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               +I    +      A E++  M
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGM 401



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 5/218 (2%)

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           + R   + P +    +L++   K G+         DMV  G  P+   ++  IG L D  
Sbjct: 11  RFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSG 70

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D A ELF  +   GC P+  ++ I++ G C+A   ++  +L  EM   G  P+   YN
Sbjct: 71  CLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYN 130

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI+ +CK G  D A   +  M  K+  SPDV+T+   I  LC +G+  +A  ++ +M+ 
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEM-RKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 599 KGC----APNRITFMALITGLCKCDRPRAALVHFRMMK 632
                   PN IT+  ++ G CK      A   F  MK
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMK 227


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 270/578 (46%), Gaps = 21/578 (3%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           + + G    K T   LL     + +F K    F+ +      D ++F+  + AF K G+V
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 265

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           ++A +L  +M++  +  N  TF  +I G     R D+A    +KM + G       Y ++
Sbjct: 266 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 325

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
           + GL + K++  A  +  EM   G  P+  + + LI S  + G L   + +K++   + +
Sbjct: 326 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           +  +   N++++    NG  D A  LL+ M+       +G  +          N  SF  
Sbjct: 386 SLTSSTYNTLIKGYCKNGQADNAERLLKEML------SIGFNV----------NQGSFTS 429

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L      D AL    EM          L   LI GLC   +  ++ EL  +    G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEA 448
           F     T N++   LC    +  A  + +++  +G     V +NT LI   C   K  EA
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT-LISGCCGKKKLDEA 548

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F FL +MV+ G  PD   YS  I GL ++ +V+ A++ + D   +G  PDV  Y+++I G
Sbjct: 549 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 608

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CKA+R  E ++ F+EM++K + P+   YN LI  +C+SG +  A L L   ++ +  SP
Sbjct: 609 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA-LELREDMKHKGISP 667

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +  TYT+LI G+ I  R ++A +L+ EM  +G  PN   + ALI G  K  +        
Sbjct: 668 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 727

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M  K + P+   +  +I  +  + N   A  +L EM
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 258/575 (44%), Gaps = 52/575 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G VEEA  LF +++  G+  PN  ++N +++ L      D   M  ++M + G      T
Sbjct: 263 GKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 321

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
            + L++    + +   A  V  E+   G+     V++ L+ +F + G ++KA E+ + M 
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 381

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + L   T+  LI G+ K  + D A +L  +M   GF  +   +  +I  LC +   +
Sbjct: 382 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 441

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL+   EM    ++P   +L+ LI+     G+ +  + E+W                  
Sbjct: 442 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW------------------ 482

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                         Q + KG  +                 +T + + +++ L + GKLD 
Sbjct: 483 -------------FQFLNKGFVV-----------------DTRTSNALLHGLCEAGKLDE 512

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  + +E+   GC+ +   YN LI G C   +L+E++  L EM + G KP ++T + +  
Sbjct: 513 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 572

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L     V  A+      +  G  P V   +++I   CK  +  E   F  +M+ +   P
Sbjct: 573 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V Y+  I       R+ +ALEL  D+   G  P+   Y  +I G+    RV EA+ LF
Sbjct: 633 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 692

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  +GL P+V  Y  LI+G+ K G + +   CL R +  ++  P+ ITYT +I G   
Sbjct: 693 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE-CLLREMHSKNVHPNKITYTVMIGGYAR 751

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            G   +A  L NEM EKG  P+ IT+   I G  K
Sbjct: 752 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 221/545 (40%), Gaps = 65/545 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+RA+RI     + +++ K      P  + +  LI      G + +A  + D +  +GL 
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKG--FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 386

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           + ++ +YN L++  CK+   D  E  LKEM   G+  ++ + T ++ + C+   FD AL 
Sbjct: 387 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 445

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              E++         + + L+    K G+  KA EL  +  +    ++ +T   L+HG  
Sbjct: 446 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 505

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++D+A ++  ++   G   D   Y+ +I G C  K+L+ A     EM   G+ PD  
Sbjct: 506 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 565

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI    +  ++   + + W+D   N M                             
Sbjct: 566 TYSILICGLFNMNKVEEAI-QFWDDCKRNGML---------------------------- 596

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  ++ ++I+   K  + +     F EM       N  +
Sbjct: 597 --------------------PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 636

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI   C S RL  + EL  +M+  G  P   T  S+ + +     V  A  L  +MR
Sbjct: 637 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 696

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G EP V H T LI    K G+ ++    L +M  +   P+ + Y+  IGG      V 
Sbjct: 697 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 756

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  L  ++   G  PD + Y   I G  K   V EA    +E            Y  +I
Sbjct: 757 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE----------ENYAAII 806

Query: 542 NGWCK 546
            GW K
Sbjct: 807 EGWNK 811



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           LAL++F  +   G  P     NI+++ L +A    +  + F +++ KG+ P V  +   I
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 256

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           N +CK G +++A+   S+M E+   +P+V+T+ T+IDGL + GR D+A M   +M E+G 
Sbjct: 257 NAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 315

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  IT+  L+ GL +  R   A    + M +KG  P++ V+  LI +F+   +   A E
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 375

Query: 662 V 662
           +
Sbjct: 376 I 376



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A D+F  +  KG+ PS  T N+L+    ++    +   C +  +  +  SPDV  +TT I
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC--CEAFDVVCKGVSPDVYLFTTAI 256

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +  C  G+ ++A+ L+++MEE G APN +TF  +I GL  C R   A +    M E+GM+
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 316

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  +  L+           A+ VLKEM
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEM 345


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 171/610 (28%), Positives = 276/610 (45%), Gaps = 35/610 (5%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  +FD++ R G    + Y  N  L  + +      V  R   M   G G     +TP
Sbjct: 37  EDARHVFDELLRRGRGA-SIYGLNRALADVARHSPAAAVS-RYNRMARAGAG----KVTP 90

Query: 107 LLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
            +  Y       C +G+ D   +    ++  G+ VD   F+ LL           A +++
Sbjct: 91  TVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIV 150

Query: 159 -ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK---SGFASDAAMYDVIIGG 214
             RM +     +  ++  L+ G   ++R  +AL+L   M      G   D   Y+ ++ G
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-T 273
             K    + A   Y EM   GI PD    S +I +         L K    D+ +  + T
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA---------LCKAQAMDKAMEVLNT 261

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M   ++  SI   Y        G+P   +G    M   G V PN  ++  ++N 
Sbjct: 262 MVKNGVMPDCMTYNSILHGY-----CSSGQPKEAIGTLKKMRSDG-VEPNVVTYSSLMNY 315

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G   ++  Y  L+ G      L E + LL  M  +G +P 
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H   N +     +++ V  A+ +  KMR  G  P V     +I  LCK G   +A  +  
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ EG  P+I+ Y++ I GL    + D A EL  ++   G C + + +N II   CK  
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TYN LI+G C +G +D+A   L+ M+      PD++TY
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV-GVKPDIVTY 554

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R DDA+ L+ EM   G +PN IT+  ++ GL    R  AA   +  + +
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 615 SGTQLELSTY 624



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 295/637 (46%), Gaps = 65/637 (10%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+P+ +SYN LL+ LC ++ S + +E+      D G G   D  +   +L  +   G  D
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D G + + V +S ++ A  K   +DKA E++  M    +  +  T+  ++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   +   Y  ++  LCKN +   A +++  M   G+ 
Sbjct: 279 HGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE 338

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYNL 295
           PD      L+   + +G L  +                 ++++ ++V NG       +N+
Sbjct: 339 PDIATYRTLLQGYATKGALVEM-----------------HALLDLMVRNGIQPDHHVFNI 381

Query: 296 LQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  A  K E +    +    + +  ++PN   +  +I+ L K G +D A+  F +M   G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N+ +Y +LI GLC  ++ +++ EL+ EM + G        NS+    C+   V+ + 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L   M   G +P +     LI   C  GK  EA + L  MV  G  PDIV Y   I G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             + R+D AL LF+++ + G  P+++ YNII+ GL   +R A A++L+  +   G    +
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 621

Query: 535 ATYNLLINGWCKSGNIDQAM-----LCLSRM-LEKESGS--------------------- 567
           +TYN++++G CK+   D+A+     LCL+ + LE  + +                     
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681

Query: 568 -------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCD 619
                  PDV TY+ + + L   G  ++   L+  MEE GC+ +     +++  L  + D
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             RA    F M+ EK      F   A  ++FL E +P
Sbjct: 742 ITRAGTYLF-MIDEK-----HFSLEASTASFLLESSP 772



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 225/533 (42%), Gaps = 87/533 (16%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI    +  R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G  PD    + L+    DE                                     
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENR---------------------------------SQ 180

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL  M       D G        G   P+  S++ ++N   K+G  D A S + EM
Sbjct: 181 EALELLHMMAD-----DRG--------GGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEM 227

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + +V  Y+++I  LC +  ++++ E+L  M ++G  P   T NS+    C     
Sbjct: 228 LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 287

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+  ++KMR  G EP V   + L+  LCK+G++ EA +    M + G  PDI  Y   
Sbjct: 288 KEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTL 347

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + G      +     L   +  +G  PD   +NI+I    K ++V +A  +F++M   GL
Sbjct: 348 LQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V  Y  +I+  CKSG++D AML   +M++ E  +P++I YT+LI GLC   + D A 
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID-EGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 591 MLWNEMEEKG-----------------------------------CAPNRITFMALITGL 615
            L  EM ++G                                     P+ IT+  LI G 
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLAFEVLKEM 666
           C   +   A      M   G+KPD+  +  LI+ +  +S ++  LA  + KEM
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA--LFKEM 577



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 41/317 (12%)

Query: 343 ALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           A+S +  M + G  +    V  Y  LI   C + RL+  +  L  + + GF+    T   
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + + LC  +    A+++V                                  L  M + G
Sbjct: 133 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELG 158

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +PD+  Y+  + GL D  R   ALEL     D    G  PDVV+YN +++G  K     
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A   ++EM+ +G++P V TY+ +I   CK+  +D+AM  L+ M+ K    PD +TY ++
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV-KNGVMPDCMTYNSI 277

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C +G+P +AI    +M   G  PN +T+ +L+  LCK  R   A   F  M ++G+
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 637 KPDMFVFVALISAFLSE 653
           +PD+  +  L+  + ++
Sbjct: 338 EPDIATYRTLLQGYATK 354



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 51/381 (13%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G +I  L   G V++A + F+Q+  EGL  PN   Y  L+  LC     D  E  + EM 
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVD 152
           D G   +      ++  +C  G+  ++  +F+ ++  G   D   ++ L+      G++D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L+  M    ++ +  T+  LI+G+ + SR+D AL LF +M  SG + +   Y++I+
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            GL   ++   A +LY  +  SG   +                                 
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTY----------------------------- 624

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N I+  L  N   D+A  + Q +     + D+ +E            T +F+I+I 
Sbjct: 625 ----NIILHGLCKNNLTDEALRMFQNLC----LTDLQLE------------TRTFNIMIG 664

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            LLK G++D A  LF   +  G + +V  Y+ + + L     LEE  +L   MEE+G   
Sbjct: 665 ALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSA 724

Query: 393 THFTLNSMFRCLCRRQDVVGA 413
               LNS+ R L +R D+  A
Sbjct: 725 DSRMLNSIVRKLLQRGDITRA 745



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 7/237 (2%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P +  Y+  IG      R+DL      ++  
Sbjct: 62  LADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVK 120

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G   D + +  ++ GLC  +R ++A D+    M   G IP V +YN L+ G C      
Sbjct: 121 KGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQ 180

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +A+  L  M +   G   PDV++Y T+++G    G  D A   ++EM ++G  P+ +T+ 
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ PD   + +++  + S   P  A   LK+M
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 193/697 (27%), Positives = 305/697 (43%), Gaps = 75/697 (10%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           R  +SP      +R L    + E    L+  + +EGL +P+  +YN ++ A CK  S+ +
Sbjct: 139 RLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGL-LPDTVTYNTMIMAYCKKGSLAI 197

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLV 143
                  +++ G   D YT   LL  YC +    KA  +   +   G   +E+ ++IL+ 
Sbjct: 198 AHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQ 257

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              +   V +A  L+  M      LN  T+ +LI G  K+ R+  A  L D+M   G   
Sbjct: 258 GLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVP 317

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS---DEGELTLL 259
               Y+ +I G CK+ +++ AL + + M+ +G  PD    + LI   C    DE E  LL
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE-ELL 376

Query: 260 VKEIWE--DRDVNTMTLLCNSIMR-------------ILVSNGSID-QAYN-LLQAMIKG 302
              I       V T T L N   +             ++ SN  +D QAY  L+  +IK 
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + +    +  +F   ++PN  ++  II+   K G +  AL +F+ M   GC  N + Y
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
            +LI GL    +L ++  L+ +M+E G  P   T  ++ +  C++ +   A  L   M  
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 556

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFL------------------------TD---- 454
            G  P  +   +L   LCK G+A EA+ FL                        TD    
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 455 ----MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               MV EG   D+  YS  +  L   K+++ AL +   +   G   ++VAY IIIS + 
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  +   A+ LFNEMI+ G  PS  TY + I+ +CK G I++A   +  M E++  +PDV
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM-ERDGVTPDV 735

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF-- 628
           +TY   I+G    G  D A      M +  C PN  T+  L+    K     A  V    
Sbjct: 736 VTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSG 795

Query: 629 ---------------RMMKEKGMKPDMFVFVALISAF 650
                          RMMK  G+ P +  + ++I+ F
Sbjct: 796 MWNWIELNMVWQLLERMMKH-GLNPTVVTYSSIIAGF 831



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 275/660 (41%), Gaps = 72/660 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  AR +    VL   +V   C ++      LI+ L   G + +A  L D++   G+ VP
Sbjct: 259 LCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGV-VP 317

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++YN +++  CKS  +         M+  G   D +T   L+   C  G+ D+A  + 
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELL 376

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N  I  G+    + F+ L+  + K   +D A  +   M   N +L+ + + VLI+  +KK
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+ +A +  ++M  +G A +   Y  II G CK   +  AL+++  M+  G  P+    
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
             LI                                   L+ +  + +A  L+  M +  
Sbjct: 497 GSLIYG---------------------------------LIQDKKLHKAMALITKMQED- 522

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                           ++P   ++  +I    K  + D A  LF  M Q G   +   YN
Sbjct: 523 ---------------GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L D LC S R EE+Y  L      G   T  T  S+     +  +   A  L+ KM  +
Sbjct: 568 VLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +  +   ++L++ LCK  K  EA   L  M   G   +IV Y+  I  +I   + D A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             LF ++ + G  P    Y + IS  CK  R+ EAE L  EM   G+ P V TYN+ ING
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING 744

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL----CIAGRPDDAIMLWNEME-- 597
               G ID+A   L RM++  S  P+  TY  L+        I     D   +WN +E  
Sbjct: 745 CGHMGYIDRAFSTLKRMVDA-SCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 598 ----------EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                     + G  P  +T+ ++I G CK  R   A V    M  K + P+  ++  LI
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 223/523 (42%), Gaps = 47/523 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG+V  A  +F  ++ EG C PN ++Y  L+  L +   +      + +MQ+ G      
Sbjct: 471 VGMVGAALEVFKLMEHEG-CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T L+Q  C   +FD A  +F  +  +G   DE  +++L  A  K G  ++A   + R 
Sbjct: 530 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK 589

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               + L + T+  L+ GF K    D A  L +KM   G  +D   Y V++  LCK K+L
Sbjct: 590 ---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 222 EMALQLYSEMKGSGITPDFE----ILSKLITSCSDEGELTLLVKEIWEDR--DVNTMTLL 275
             AL +  +M  SG+  +      I+S++I     +   +L  + I         T T+ 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            +S  +I    G I++A +L+  M                 +  V+P+  +++I IN   
Sbjct: 707 ISSYCKI----GRIEEAEHLIGEM----------------ERDGVTPDVVTYNIFINGCG 746

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLI----------------DGLCNSNRLEESY 379
             G +D A S  + M    C  N + Y  L+                 G+ N   L   +
Sbjct: 747 HMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVW 806

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL  M + G  PT  T +S+    C+   +  A  L+  M  +   P  +  T+LIK  
Sbjct: 807 QLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCC 866

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C      +A  F+TDM++ GF P +  Y   I GL D    D A  LF D+       + 
Sbjct: 867 CDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNE 926

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           VA+ I+  GL KA  V     L   M  +       +Y++L +
Sbjct: 927 VAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 37/340 (10%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +++ + +LL+    +    L+  + Q G + +   YN +I   C    L  ++     + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           ESG +   +T N++    CR  D+  A  L+  M + G        T+LI+ LC+     
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA   +  MV +                                   GC  ++  Y ++I
Sbjct: 267 EALVLVFMMVHD-----------------------------------GCSLNLHTYTLLI 291

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GLCK  R+ +A  L +EM  +G++PSV TYN +I+G+CKSG +  A L +  ++E+   
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA-LGIKALMEQNGC 350

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           +PD  TY +LI GLC  G+ D+A  L N    +G  P  ITF  LI G CK +R   AL 
Sbjct: 351 NPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               M     K D+  +  LI+  + +     A E L EM
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEM 449


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 185/682 (27%), Positives = 302/682 (44%), Gaps = 68/682 (9%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R++  D+V    F     L FL+  L    ++ EA  +++++  +G+   + ++ + ++ 
Sbjct: 199 RLVESDIVPWIKF-----LNFLLTALVKNDMIYEAREVYEKMVLKGVH-GDCFTVHIMMR 252

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV- 133
           A  K  + +  +    E +  G   D    + ++Q +C +   + A  +  ++ D GWV 
Sbjct: 253 ANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVP 312

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
            E  F+ ++ A  K G + +A  L + M  C +++N      L+ G+ K+ ++  AL+ F
Sbjct: 313 SEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFF 372

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---C 250
           DKM ++G + +   Y V+I   CKN  +  A  LY++MK   I P   I++ LI      
Sbjct: 373 DKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKV 432

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVG 309
               E + L  E       N  T   NS++  L   G + +A  L Q M+ KG     V 
Sbjct: 433 ESREEASKLFDEAVACDIANIFTY--NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVS 490

Query: 310 VEMLM--------------IFKGTV----SPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
              ++              +F   +     PN  ++ I+++   K+G  + A  +F  M 
Sbjct: 491 YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV 550

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
               + + F YN  I+GLC   R  E+ ++L++  E GF P   T NS+     +   V 
Sbjct: 551 DENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVS 610

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL   R+M   G  P V   T LI   CK+     A +   +M  +G   DI  Y A I
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG----------------------- 508
            G    + ++ A  LF ++   G  P+ V YN +ISG                       
Sbjct: 671 DGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730

Query: 509 ------------LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
                       L K  R+  A DL++EM  KG+IP +  Y +LING C  G ++ A   
Sbjct: 731 CDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKI 790

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L+ M E++S +P+V  Y  LI G   AG   +A  L NEM +KG  PN  T+  LI G  
Sbjct: 791 LAEM-ERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKI 849

Query: 617 K-CDRPRAALVHFRMMKEKGMK 637
           K  +    +L+  +    KGMK
Sbjct: 850 KGGNSALKSLLSLKFKDGKGMK 871



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 175/636 (27%), Positives = 281/636 (44%), Gaps = 58/636 (9%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N LL AL K+  +       ++M   G   D +T+  +++        ++A   F E   
Sbjct: 213 NFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKS 272

Query: 130 HG-WVDEHVFSILLVAFSKWGEVDKACELIERMDD------------------------- 163
            G  +D   +SI++ AF K  +V+ AC L++ M D                         
Sbjct: 273 RGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVE 332

Query: 164 ----------CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
                     C +++N      L+ G+ K+ ++  AL+ FDKM ++G + +   Y V+I 
Sbjct: 333 ALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIE 392

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---SCSDEGELTLLVKEIWEDRDVN 270
             CKN  +  A  LY++MK   I P   I++ LI          E + L  E       N
Sbjct: 393 WCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIAN 452

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             T   NS++  L   G + +A  L Q M+      D G          ++P   S++ +
Sbjct: 453 IFTY--NSLLSWLCKEGKMSEATTLWQKML------DKG----------LAPTKVSYNSM 494

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    + G LD+A S+F +M   G   NV  Y+ L+DG   +   E ++ +   M +   
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P+ FT N     LC+      A ++++K   +G  P       ++    K G    A  
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M + G  P+++ Y+  I G       DLAL++  ++   G   D+ AY  +I G C
Sbjct: 615 AYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFC 674

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K Q +  A  LF+E++  GL P+   YN LI+G+    N++ A+    RML  E  S D+
Sbjct: 675 KKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML-GEGISCDL 733

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TYTTLIDGL   GR   A+ L++EM  KG  P+ I +  LI GLC   +   A      
Sbjct: 734 QTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAE 793

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M+   + P++ ++ ALI+      N   AF +  EM
Sbjct: 794 MERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 240/558 (43%), Gaps = 83/558 (14%)

Query: 172 TFCVLIHGFVKKSRVDKALQ-----------------LFDKMTKS----GFASDAAMYDV 210
           + CVL+H   + S   K  Q                 L D    S     F SD  +Y+ 
Sbjct: 120 SLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNY 179

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---R 267
           ++    K  +L  A+  ++ +  S I P  + L+ L+T+   + ++    +E++E    +
Sbjct: 180 LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALV-KNDMIYEAREVYEKMVLK 238

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPI-------------ADVGVEML 313
            V+      + +MR  + + + ++A    L+A  +G  +              ++ VE+ 
Sbjct: 239 GVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELA 298

Query: 314 ------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                 M  KG V P+  +F  +I   +K G +  AL L  EM   G   NV +   L+ 
Sbjct: 299 CGLLKDMRDKGWV-PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVK 357

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM------- 420
           G C  ++L  + E   +M E+G  P   T   +    C+  ++  A +L  +M       
Sbjct: 358 GYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICP 417

Query: 421 -------------RVQGHEPWVK---------------HNTLLIKELCKHGKAMEAFRFL 452
                        +V+  E   K               +N+LL   LCK GK  EA    
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLL-SWLCKEGKMSEATTLW 476

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M+ +G  P  V Y++ I G      +D+A  +F D+   G  P+V+ Y+I++ G  K 
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
                A  +F+ M+ + ++PS  TYN+ ING CK G   +A   L + +EK    P  +T
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK-GFVPVCLT 595

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y +++DG    G    A+  + EM E G +PN IT+  LI G CK +    AL     M+
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655

Query: 633 EKGMKPDMFVFVALISAF 650
            KG++ D+  + ALI  F
Sbjct: 656 NKGLELDIAAYGALIDGF 673



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 174/377 (46%), Gaps = 7/377 (1%)

Query: 293 YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           YN LL + IK   + D       + +  + P     + ++  L+K+  +  A  ++ +M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   + F  + ++      N  EE+ +   E +  G K      + + +  C+  DV 
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L++ MR +G  P     T +I    K G  +EA R   +MV  G   ++V  +  +
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G     ++  ALE F  +  +G  P+ V Y ++I   CK   +A+A DL+ +M  K + 
Sbjct: 357 KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDA 589
           P+V   N LI G+ K  + ++A    S++ ++       ++ TY +L+  LC  G+  +A
Sbjct: 417 PTVFIVNSLIRGFLKVESREEA----SKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEA 472

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             LW +M +KG AP ++++ ++I G C+      A   F  M + G+KP++  +  L+  
Sbjct: 473 TTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDG 532

Query: 650 FLSELNPPLAFEVLKEM 666
           +    +   AF V   M
Sbjct: 533 YFKNGDTEYAFYVFDRM 549



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 1/169 (0%)

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+  YN +++   KA ++ +A   FN ++   ++P +   N L+    K+  I +A    
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M+ K     D  T   ++         ++A   + E + +G   +   +  +I   CK
Sbjct: 233 EKMVLKGVHG-DCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 A    + M++KG  P    F ++I A + + N   A  +  EM
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 270/570 (47%), Gaps = 16/570 (2%)

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACE 156
           G D      L++ Y  + + ++    F  +   G+ V  +  + LL    K G VD A E
Sbjct: 112 GVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWE 171

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +   +    I LN  T  ++++   K  ++D        M + G  +D   Y+ +I   C
Sbjct: 172 VYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYC 231

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           +   L  A ++ + M G G+ P     + +I     +G   +  K ++            
Sbjct: 232 REGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRY-VRAKGVF------------ 278

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++ I +S  +      L+++      +    +   M+ +G VSP+  SF  +I    +
Sbjct: 279 NEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG-VSPDLISFSSLIGVSSR 337

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +G LD AL  FR+M   G + +  +Y  LI+G C +  + E+ E+  +M E G       
Sbjct: 338 NGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC+++ +  A  L  +M  +G  P     T LI   CK G   +A      M 
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           Q+   PDIV Y+  I G      ++ A EL+ ++ +    P+ ++Y I+++G C    V+
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS 517

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA  L++EMI KG+ P++ T N +I G+C+SG++ +A   L +M+ +  G PD ITY TL
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG-PDSITYNTL 576

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I+G       D A  L N+ME KG  P+ +T+  ++ G C+  R + A +  R M E+G+
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGI 636

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD   +  LI+ ++S+ N   AF    EM
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 284/644 (44%), Gaps = 63/644 (9%)

Query: 4   ILSRARRIAPLRV-LAQDVVK--SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           IL   RR    RV + + ++   S C +       LIR       + E    F  ++R+G
Sbjct: 86  ILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKG 145

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             V  N + N LL  L K   VDL      E+   G   + YTL  ++   C   + D  
Sbjct: 146 FLVSIN-ACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDV 204

Query: 121 LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                ++   G + D   ++ L+ A+ + G + +A E++  M    ++    T+  +I+G
Sbjct: 205 KPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVING 264

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             KK R  +A  +F++M   G + D   Y+ ++   C+N     A  ++S+M   G++PD
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               S LI   S                                  NG +DQA       
Sbjct: 325 LISFSSLIGVSS---------------------------------RNGHLDQA------- 344

Query: 300 IKGEPIADVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                        LM F+      + P+   + I+IN   ++G +  AL +  +M + GC
Sbjct: 345 -------------LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGC 391

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  YN +++GLC    L ++  L  EM E G  P   T  ++    C+  ++  AL+
Sbjct: 392 ALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALS 451

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L   M  +  +P +    +LI   CK  +  +A     +M+     P+ + Y+  + G  
Sbjct: 452 LFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYC 511

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           ++  V  A  L+ ++   G  P +V  N +I G C++  +++A++   +MI++G+ P   
Sbjct: 512 NLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSI 571

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN LING+ K   +D+A   +++M E +   PDV+TY  +++G C  GR  +A ++  +
Sbjct: 572 TYNTLINGFVKGEYMDKAFFLINKM-ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           M E+G  P+R T+  LI G    D  + A      M ++G  PD
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 215/501 (42%), Gaps = 20/501 (3%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L +  +I  ++    D+ +   F        LI      GL+ EA  + + +  +G
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L  P  ++YN ++  LCK       +    EM   G   D  T   LL   C +  F +A
Sbjct: 251 L-KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F++++  G   + + FS L+   S+ G +D+A      M    +  +   + +LI+G
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + +   + +AL++ DKM + G A D   Y+ I+ GLCK K L  A  L+ EM   G+ PD
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429

Query: 240 FEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           F   + LI     EG +   L +  I   +++    +  N ++        +++A  L  
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI  +                + PN  S+ I++N     G +  A  L+ EM + G   
Sbjct: 490 EMISRK----------------IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
            +   N +I G C S  L ++ E L +M   G  P   T N++     + + +  A  L+
Sbjct: 534 TLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLI 593

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM  +G +P V    +++   C+ G+  EA   L  M++ G  PD   Y+  I G +  
Sbjct: 594 NKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQ 653

Query: 478 KRVDLALELFRDICAHGCCPD 498
             +  A     ++   G  PD
Sbjct: 654 DNLKEAFRFHDEMLQRGFVPD 674



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  L ++++ +GL  P+  +YN +L   C+   +   E+ L++M + G   D+ T T
Sbjct: 586 MDKAFFLINKMETKGL-QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYT 644

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
            L+  Y +     +A    +E++  G+V +  F
Sbjct: 645 TLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 270/578 (46%), Gaps = 21/578 (3%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           + + G    K T   LL     + +F K    F+ +      D ++F+  + AF K G+V
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           ++A +L  +M++  +  N  TF  +I G     R D+A    +KM + G       Y ++
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
           + GL + K++  A  +  EM   G  P+  + + LI S  + G L   + +K++   + +
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           +  +   N++++    NG  D A  LL+ M+       +G  +          N  SF  
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEML------SIGFNV----------NQGSFTS 440

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L      D AL    EM          L   LI GLC   +  ++ EL  +    G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEA 448
           F     T N++   LC    +  A  + +++  +G     V +NT LI   C   K  EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT-LISGCCGKKKLDEA 559

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F FL +MV+ G  PD   YS  I GL ++ +V+ A++ + D   +G  PDV  Y+++I G
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CKA+R  E ++ F+EM++K + P+   YN LI  +C+SG +  A L L   ++ +  SP
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA-LELREDMKHKGISP 678

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +  TYT+LI G+ I  R ++A +L+ EM  +G  PN   + ALI G  K  +        
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M  K + P+   +  +I  +  + N   A  +L EM
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 258/575 (44%), Gaps = 52/575 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G VEEA  LF +++  G+  PN  ++N +++ L      D   M  ++M + G      T
Sbjct: 274 GKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
            + L++    + +   A  V  E+   G+     V++ L+ +F + G ++KA E+ + M 
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + L   T+  LI G+ K  + D A +L  +M   GF  +   +  +I  LC +   +
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL+   EM    ++P   +L+ LI+     G+ +  + E+W                  
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW------------------ 493

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                         Q + KG  +                 +T + + +++ L + GKLD 
Sbjct: 494 -------------FQFLNKGFVV-----------------DTRTSNALLHGLCEAGKLDE 523

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  + +E+   GC+ +   YN LI G C   +L+E++  L EM + G KP ++T + +  
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L     V  A+      +  G  P V   +++I   CK  +  E   F  +M+ +   P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V Y+  I       R+ +ALEL  D+   G  P+   Y  +I G+    RV EA+ LF
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  +GL P+V  Y  LI+G+ K G + +   CL R +  ++  P+ ITYT +I G   
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE-CLLREMHSKNVHPNKITYTVMIGGYAR 762

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            G   +A  L NEM EKG  P+ IT+   I G  K
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/545 (23%), Positives = 221/545 (40%), Gaps = 65/545 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+RA+RI     + +++ K      P  + +  LI      G + +A  + D +  +GL 
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKG--FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           + ++ +YN L++  CK+   D  E  LKEM   G+  ++ + T ++ + C+   FD AL 
Sbjct: 398 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              E++         + + L+    K G+  KA EL  +  +    ++ +T   L+HG  
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++D+A ++  ++   G   D   Y+ +I G C  K+L+ A     EM   G+ PD  
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI    +  ++   + + W+D   N M                             
Sbjct: 577 TYSILICGLFNMNKVEEAI-QFWDDCKRNGML---------------------------- 607

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  ++ ++I+   K  + +     F EM       N  +
Sbjct: 608 --------------------PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI   C S RL  + EL  +M+  G  P   T  S+ + +     V  A  L  +MR
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G EP V H T LI    K G+ ++    L +M  +   P+ + Y+  IGG      V 
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  L  ++   G  PD + Y   I G  K   V EA    +E            Y  +I
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE----------ENYAAII 817

Query: 542 NGWCK 546
            GW K
Sbjct: 818 EGWNK 822



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 2/181 (1%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           LAL++F  +   G  P     NI+++ L +A    +  + F +++ KG+ P V  +   I
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 267

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           N +CK G +++A+   S+M E+   +P+V+T+ T+IDGL + GR D+A M   +M E+G 
Sbjct: 268 NAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  IT+  L+ GL +  R   A    + M +KG  P++ V+  LI +F+   +   A E
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 662 V 662
           +
Sbjct: 387 I 387



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A D+F  +  KG+ PS  T N+L+    ++    +   C +  +  +  SPDV  +TT I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC--CEAFDVVCKGVSPDVYLFTTAI 267

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +  C  G+ ++A+ L+++MEE G APN +TF  +I GL  C R   A +    M E+GM+
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  +  L+           A+ VLKEM
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEM 356


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 286/632 (45%), Gaps = 54/632 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++  G  G   +A  L   ++   LC P   SY+ +LE L       +      +M   
Sbjct: 153 IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK 212

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G     +T   +++  C   + D A S+  ++  HG V +  V+  L+ A S+  +V +A
Sbjct: 213 GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEA 272

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E M       + +TF  +IHG  K +++  A +L D+M   GF  D   Y  ++ G
Sbjct: 273 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHG 332

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+  +L  A ++  ++      P+  IL+ LI                           
Sbjct: 333 LCRIGKLNEARKILIKIP----CPNNAILNTLING------------------------- 363

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                    V +G + +A + L      E + + G +          P+  +++I+++ L
Sbjct: 364 --------YVMSGQLKEAQSFLN-----ETMINFGFQ----------PDIFTYNILMHGL 400

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K+G L  A  L  EM++ GC  NV  Y  L++GLC +  LEE+  +L EM   G     
Sbjct: 401 CKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINS 460

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
              N +   LCR++ V  ALNL+ +M  +G +P +     LI  LCK  +  EAFR   +
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+ +G + + V Y+  I  L+       AL L  D+   GC  D + YN +I   CK   
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +  +L+ +MI  GL     + N++ING CK G +D A   L   + +    PD++TY 
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYN 639

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           ++++GLC  GR  +A+ L++ ++ +G  P+  T+   I+  CK      A   F    E 
Sbjct: 640 SVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIEN 699

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  P    +  L+   L + N    F VL E+
Sbjct: 700 GFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 231/534 (43%), Gaps = 27/534 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++ L     V+ A  L   + + G CVPN+  Y  L+ AL +   V      L+E
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEE 278

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M   G   D  T   ++   C   +   A  + + ++  G + D   +  LL    + G+
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK-MTKSGFASDAAMYD 209
           +++A +++ ++  C    N      LI+G+V   ++ +A    ++ M   GF  D   Y+
Sbjct: 339 LNEARKILIKI-PCP---NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYN 394

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWED 266
           +++ GLCK   L  A  L +EM   G  P+    + L+      G   E  L++ E+   
Sbjct: 395 ILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEM-SA 453

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           R +   +++ N ++  L     +  A NLL  M                 KG   P+  +
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT---------------KGC-KPDLFT 497

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I  L K  ++D A  LF  M   G + N   YN LI  L      +++  L+ +M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G      T N + +  C+  ++   L L  +M + G         ++I  LCK GK  
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            AF FL D +  GF+PDIV Y++ + GL  + R+  AL LF  +   G  PD   YN  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           S  CK   V +A   F   I  G +PS  T+N+L+    K  N +     L  +
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 22/404 (5%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           RI  L    + ++K  C  +   L  LI      G ++EA    ++        P+ ++Y
Sbjct: 335 RIGKLNEARKILIKIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+  LCK  S+      + EM   G   +  T   L+   C +G  ++A  V +E+  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  ++  +++ L+ A  +  +V  A  L+  M     + +  T+  LI+G  K  R+D+
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +LF  M   G  ++   Y+ +I  L +    + AL L ++M   G T D    + LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 249 SCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +    G +   + E++E   ++ +   T+ CN ++  L   G +D A+  L+  I     
Sbjct: 574 AFCKVGNIEKGL-ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAIN---- 628

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                      +G V P+  +++ ++N L K G++  AL+LF  +   G   + F YN  
Sbjct: 629 -----------RGFV-PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF 676

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           I   C    + ++        E+GF P++ T N +   L ++ +
Sbjct: 677 ISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 11/291 (3%)

Query: 380 ELLREMEESG--FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEPWVKHNTLLI 436
           +LL +M+E G  F+ + F +  + +   +      A+ L+  MR V   EP  K   L++
Sbjct: 133 KLLMQMKEEGIVFRESIFMI--IMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVL 190

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + L        A     DM+ +G  P +  +   +  L     VD A  L RD+  HGC 
Sbjct: 191 EILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCV 250

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+ + Y  +I  L +  +V+EA  L  EM   G +P V T+N +I+G CK   I  A   
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           + RML +    PD +TY  L+ GLC  G+ ++A     ++  K   PN      LI G  
Sbjct: 311 VDRMLLR-GFYPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYV 365

Query: 617 KCDRPRAALVHF-RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              + + A       M   G +PD+F +  L+     E +   A +++ EM
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 1/188 (0%)

Query: 480 VDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           V   LE+F  +    G C     Y + I+ L    +    + L  +M  +G++   + + 
Sbjct: 92  VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM 151

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +++  + K+G   QA+  L  M       P   +Y  +++ L     P  A  ++ +M  
Sbjct: 152 IIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS 211

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +P   TF  ++  LC  +   +A    R M + G  P+  V+  LI A   +     
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 659 AFEVLKEM 666
           A ++L+EM
Sbjct: 272 ALKLLEEM 279


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 174/615 (28%), Positives = 288/615 (46%), Gaps = 40/615 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A G LI      G +E+AN + D++   G+ V N + YN ++   CK   +  VE  L+ 
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQV-NMFVYNTMINGYCKLGRMGEVEKLLQA 330

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
            +  G   D+Y+   L+  YC  G   KA    + ++ +G+    + ++ LL  F   G 
Sbjct: 331 NEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGA 390

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A +L   M    +  NE +   L+ GF K  + ++AL L+ +    G A +    + 
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINT 450

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I GLCKN+++  A +L+  MK      D      LI      G+L    +         
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQ--------- 501

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA-------DVGVEMLMIFKGTVSPN 323
                    +RI + N     +  +  + I G  IA       D+ VEM    KG +SPN
Sbjct: 502 ---------IRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA--KG-LSPN 549

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T ++  +I    K+G L  A  L+ EM + G   N+F+ + L+       +++E+  +L+
Sbjct: 550 TVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           ++ ++         + +  C     ++    +++  +    H+       ++I  LCK G
Sbjct: 610 KLADT---------DMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A     D+  +GF+PD   YS+ I G      +DLA  L  ++ +    P++V YN
Sbjct: 661 RVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYN 720

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GLCK+  V+ A  LFN++ +KG+ P+  TYN LI+G CK GN  +A     +M+ K
Sbjct: 721 SLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI-K 779

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           E   P V TYT LI GLC  G  ++AI L ++M E    PN IT+  LI G  +C   +A
Sbjct: 780 EGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKA 839

Query: 624 ALVHFRMMKEKGMKP 638
               +  M   G+ P
Sbjct: 840 ITKLYNEMHICGLLP 854



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 295/653 (45%), Gaps = 81/653 (12%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDK 101
           +G  E A  L   ++ +GL  PN  +Y  L++  CK   ++  E  +KE+ ++     D+
Sbjct: 212 IGQTEVARKLLHSLQVKGLS-PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDE 270

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIER 160
                L+  YC  G+ + A  V +E+ID G  V+  V++ ++  + K G + +  +L++ 
Sbjct: 271 VAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQA 330

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
            +   + L+E ++  L+ G+ +K  + KA +  D M ++GF      Y+ ++ G C    
Sbjct: 331 NEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGA 390

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           ++ AL+L+  M   G+ P+                                  + C++++
Sbjct: 391 IDDALKLWFLMLKRGVVPN---------------------------------EISCSTLL 417

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                 G  +QA NL +     E +A          +G ++ N  + + +IN L K+ ++
Sbjct: 418 DGFFKAGKTEQALNLWK-----ETLA----------RG-LARNVVTINTVINGLCKNRRM 461

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  LF  M +  C  +   Y  LIDG C    L  + ++  EME  GF P+    NS 
Sbjct: 462 TEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSF 521

Query: 401 FRCLCRRQDVVGALNLVR-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              L   +   G +N +R +M  +G  P       LI   CK G   +A     +MV++G
Sbjct: 522 ITGLFIAKQS-GKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLA---------LELFRDICAHGCCPDVVAY-------- 502
             P++   S  +       +VD A          ++ +D  A       VA+        
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGG 640

Query: 503 ---------NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
                    NI+I GLCK  RVA+A +LF ++  KG IP   TY+ LI+G   SG+ID A
Sbjct: 641 NHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA 700

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 ML     +P+++TY +LI GLC +     A+ L+N+++ KG +PN IT+  LI 
Sbjct: 701 FGLRDEMLSARL-TPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLID 759

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G CK      A    + M ++G++P +F +  LI    ++     A ++L +M
Sbjct: 760 GHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM 812



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 253/575 (44%), Gaps = 62/575 (10%)

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSIL 141
           DLVE+     +D+ +    + L  LL+ + ++GQ   AL VF+E+   G        + L
Sbjct: 82  DLVEV----YKDFSFSAASFDL--LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRL 135

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L    + G++  A  + ++M       ++ T  ++   + +  RV  A     +M + G 
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTL 258
             +   Y  ++ G C+  Q E+A +L   ++  G++P+    + L+     EG   E   
Sbjct: 196 DVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEK 255

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           +VKEI E+  +    +   +++      G ++ A  +   MI      D GV++ M    
Sbjct: 256 VVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMI------DAGVQVNMFV-- 307

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                   ++ +IN   K G++     L +     G   + + YN L+DG C    + ++
Sbjct: 308 --------YNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           +E    M  +GF  T  T N++    C R  +  AL L           W          
Sbjct: 360 FETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKL-----------W---------- 398

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
                       FL  M++ G +P+ +  S  + G     + + AL L+++  A G   +
Sbjct: 399 ------------FL--MLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARN 444

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV  N +I+GLCK +R+ EAE+LF+ M          TY  LI+G+CK G++ +A     
Sbjct: 445 VVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRI 504

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M E     P V  + + I GL IA +      +  EM  KG +PN +T+ ALI G CK 
Sbjct: 505 EM-ENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKE 563

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                A + +  M EKG+KP++F+   L+S F  E
Sbjct: 564 GNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L+    ++ +L+++  +  EM ++G + T  + N +   L +  D+  A+ + ++MR  G
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAG 159

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P      ++ K  C+ G+   A  FL +M + G               +D+       
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMG---------------LDV------- 197

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
                        ++VAY+ ++ G C+  +   A  L + +  KGL P+V TY LL+ G+
Sbjct: 198 -------------NLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGY 244

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +++A   +  + E E    D + Y  LI+G C  GR +DA  + +EM + G   N
Sbjct: 245 CKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVN 304

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
              +  +I G CK  R        +  + +G+  D + +  L+  +  +     AFE 
Sbjct: 305 MFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFET 362


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 282/630 (44%), Gaps = 46/630 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + +N +L +L  +     V    K+ +  G   D  TL  L+  +C+      A SV
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              I+  G+    +  + L+      GE+ KA    +++     +LN+ ++  LI+G  K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                   +L  K+       D  MY+ II  LCKNK L  A  LYSEM   GI+P+   
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAMI 300
            + L+      G L      + E +  N    +C  N+++  L   G +  A  +L  M+
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 301 KG-------------------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           K                      + +       + +  V+PN  ++  +I+ L K+  +D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+SLF EM     + ++  Y +LIDGLC ++ LE +  L ++M+E G +P  ++   + 
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   +  A    +++ V+G+   V+   ++I  LCK     EA    + M  +G +
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHG---------------------CC--PD 498
           PD + +   I  L +    D A ++ R++ A G                      C  PD
Sbjct: 481 PDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPD 540

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV Y  ++ G      +  A+ +F  M   G+ P+V  Y ++I+G CK   +D+AM    
Sbjct: 541 VVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFE 600

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M  K +  P+++TYT+LID LC     + AI L  EM+E G  P+  ++  L+ GLCK 
Sbjct: 601 EMKHK-NMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS 659

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            R   A   F+ +  KG   ++ V+ A+I+
Sbjct: 660 GRLEGAKEIFQRLLVKGYHLNVQVYTAMIN 689



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 223/484 (46%), Gaps = 27/484 (5%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+  FD+M           ++ I+  L  NK     + L+ + + +G TPD   L+ L+ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 249 SCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA-YNLLQAMIKGE 303
                  +T    +L   +      N +TL  N++++ L   G I +A Y   Q + +G 
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITL--NTLIKGLCFRGEIKKALYFHDQVVAQGF 164

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            +                 N  S+  +IN L K G+      L R++       +V +YN
Sbjct: 165 QL-----------------NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYN 207

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +I  LC +  L ++ +L  EM   G  P   T N++    C    +  A +L+ +M+++
Sbjct: 208 TIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLK 267

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P V     LI  L K GK   A   L  M++    PD+V Y++ I G   + +V  A
Sbjct: 268 NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNA 327

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             +F  +   G  P+V  Y  +I GLCK + V EA  LF EM  K +IP + TY  LI+G
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387

Query: 544 WCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            CK+ ++++A+    +M  KE G  PDV +YT L+D LC  GR ++A   +  +  KG  
Sbjct: 388 LCKNHHLERAIALCKKM--KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            N  T+  +I GLCK D    A+     M+ KG  PD   F  +I A   +     A ++
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKI 505

Query: 663 LKEM 666
           L+EM
Sbjct: 506 LREM 509



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 253/577 (43%), Gaps = 56/577 (9%)

Query: 57  KREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSG 115
           K EG  V P+   YN ++ +LCK+  +        EM   G   +  T   L+  +C  G
Sbjct: 193 KLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMG 252

Query: 116 QFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
              +A S+ NE+ + +   D   F+ L+ A  K G++  A  ++  M    I+ +  T+ 
Sbjct: 253 HLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYN 312

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI G+   ++V  A  +F  M +SG   +   Y  +I GLCK K ++ A+ L+ EMK  
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK 372

Query: 235 GITPDFEILSKLITSCSDEGELTLLV------KEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            + PD    + LI        L   +      KE     DV + T+L ++    L   G 
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA----LCKGGR 428

Query: 289 IDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           ++ A    Q + +KG  +                 N  +++++IN L K      A+ L 
Sbjct: 429 LENAKEFFQRLLVKGYHL-----------------NVQTYNVMINGLCKADLFGEAMDLK 471

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF--------KPTHFTLNS 399
            +M   GCM +   +  +I  L   +  +++ ++LREM   G         K     L  
Sbjct: 472 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAV 531

Query: 400 MFRCLCRRQDVV----------------GALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           M +  C + DVV                 A  +   M   G  P V+  T++I  LCK  
Sbjct: 532 MTKA-CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EA     +M  +   P+IV Y++ I  L     ++ A+ L +++  HG  PDV +Y 
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYT 650

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I++ GLCK+ R+  A+++F  ++ KG   +V  Y  +IN  CK+G  D+A L L   +E 
Sbjct: 651 ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEA-LDLQXKMED 709

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +   PD +T+  +I  L      D A  +  EM  +G
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 226/497 (45%), Gaps = 28/497 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  LG  G ++ A ++   V  +    P+  +YN L++       V   +     M   
Sbjct: 279 LIDALGKEGKMKAAKIVL-AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS 337

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T T ++   C     D+A+S+F E+     + + V ++ L+    K   +++A
Sbjct: 338 GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L ++M +  I+ +  ++ +L+    K  R++ A + F ++   G+  +   Y+V+I G
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK      A+ L S+M+G G  PD      +I +  ++ E          D+       
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE---------NDK------- 501

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
               I+R +++ G        LQ   K   + +  + + ++ K  + P+  ++  +++  
Sbjct: 502 -AEKILREMIARG--------LQEARKVR-LKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
               +L  A  +F  M Q+G   NV  Y  +IDGLC    ++E+  L  EM+     P  
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  S+   LC+   +  A+ L+++M+  G +P V   T+L+  LCK G+   A      
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           ++ +G+  ++  Y+A I  L      D AL+L   +   GC PD V ++III  L +   
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDE 731

Query: 515 VAEAEDLFNEMITKGLI 531
             +AE +  EMI +GL+
Sbjct: 732 NDKAEKILXEMIARGLM 748


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 291/630 (46%), Gaps = 61/630 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y+Y+ L+EA CK    D  +  L EM++ G G +  T   L+   C SG  ++A   
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++ D+G V D   +  L+    K    ++A  L++ M    ++ N   +  LI GF++
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +   D+A ++  +M  +G   +   YD ++ GLCK  Q++ A  L  +M      PD   
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 243 LSKLITS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + +I       S +    LL +   E+  ++      + ++  L  +G  ++A +LL+ 
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSE--MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M                 KG + PN   +  +I+   ++G + LA  +F +MT++  + +
Sbjct: 480 MTT---------------KG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           ++ YN+LI GL    R+EES +   +M+E G  P  FT + +     +  D+  A  LV+
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 583

Query: 419 KMRVQGHEP-----------WVKHNT------------------------LLIKELCKHG 443
           +M   G +P           + K +                         +LI  L   G
Sbjct: 584 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 643

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
               AFR L+ + + G +PD+  YS+ I GL      + A  +  ++   G  P++V YN
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 703

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GLCK+  ++ A ++FN ++ KGL+P+  TY  LI+G CK G+I  A    + ML  
Sbjct: 704 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 763

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +PD   Y+ L  G   AG  + A+ L  EM  +G A +  +F  L+ G CK  + + 
Sbjct: 764 -GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQE 821

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            L    ++  +G+ P+      +IS  LSE
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENIISG-LSE 850



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 290/636 (45%), Gaps = 22/636 (3%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C ++      LI  L   G VEEA      ++  GL VP+ ++Y  L+  LCKS   +  
Sbjct: 275 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL-VPDGFTYGALINGLCKSRRSNEA 333

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           +  L EM       +      L+  +   G  D+A  +  E++  G     + +  L+  
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G++D+A  L+++M   + R +  T+ ++I G  +      A +L  +M  +G + +
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y ++I GLC++ + E A  L  EM   G+ P+  + + LI+    EG ++L  +   
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513

Query: 265 EDRDVNTMT-LLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +   VN +  L C NS++  L   G ++++      M +               +G + P
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE---------------RGLL-P 557

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+  LK+G L+ A  L + M   G   N  +Y +L++    S+ +E+     
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + M + G    +     +   L    ++  A  ++  +   G  P V   + LI  LCK 
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 677

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               +AF  L +M ++G  P+IVCY+A I GL     +  A  +F  I A G  P+ V Y
Sbjct: 678 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I G CK   ++ A  L+NEM+  G+ P    Y++L  G   +G+++QAM  +  M  
Sbjct: 738 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 797

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +  G   + ++  L+DG C  G+  + + L + +  +G  PN +T   +I+GL +  +  
Sbjct: 798 R--GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 855

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
                F  +++K  +     F +L    +++   PL
Sbjct: 856 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 891



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 277/611 (45%), Gaps = 60/611 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  +G ++ A++L  Q+ R+    P+  +YN ++E   +  S       L EM++ 
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 448

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   + YT + ++   C SG+ +KA  +  E+   G   +  V++ L+  + + G V  A
Sbjct: 449 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           CE+ ++M   N+  +   +  LI G  K  RV+++ + F +M + G   +   Y  +I G
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTM 272
             KN  LE A QL   M  +G+ P+  I   L+ S   SD+ E      +   D+ V   
Sbjct: 569 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV--- 625

Query: 273 TLLCNSIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIF------------ 316
            +L N I  IL+ N    G+++ A+ +L  + K   + DV V   +I             
Sbjct: 626 -MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 317 -------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  K  V PN   ++ +I+ L K G +  A ++F  +   G + N   Y +LIDG 
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C    +  ++ L  EM  +G  P  F  + +        D+  A+ L+ +M ++GH    
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 804

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
             N L +   CK GK  E  + L  ++  G +P+ +     I GL +  ++     +F +
Sbjct: 805 SFNNL-VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 863

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEA-----EDLFNEMITKGLIPSVATYNLLINGW 544
           +                      Q+ +E+       LF +MI +G IP +   + +I   
Sbjct: 864 L---------------------QQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDH 901

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK GN+D+A++ L  ++  +S      +Y  ++D LC  G+  +A+ L  EM+++G  P+
Sbjct: 902 CKEGNLDKALM-LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960

Query: 605 RITFMALITGL 615
               + L+T L
Sbjct: 961 ENQCLILLTNL 971



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/613 (23%), Positives = 273/613 (44%), Gaps = 34/613 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +EA  +  ++   G+  PN  +Y+ L+  LCK   +D   + LK+M       D  T
Sbjct: 363 GNADEAFKMIKEMVAAGV-QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
              +++ +        A  + +E+ + G     + +SI++    + GE +KA +L+E M 
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ N   +  LI G+ ++  V  A ++FDKMTK     D   Y+ +I GL K  ++E
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            + + +++M+  G+ P+    S LI      G+L    + +    D     L  N ++ I
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG---LKPNDVIYI 598

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                      +LL++  K + I  V      +    V  +   + I+I+ L   G ++ 
Sbjct: 599 -----------DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 647

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +   + + G + +V +Y++LI GLC +   E+++ +L EM + G  P     N++  
Sbjct: 648 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 707

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+  D+  A N+   +  +G  P     T LI   CK G    AF    +M+  G  P
Sbjct: 708 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D   YS    G      ++ A+ L  ++   G    + ++N ++ G CK  ++ E   L 
Sbjct: 768 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLL 826

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP---------DVITY 573
           + ++ +GL+P+  T   +I+G  ++G + +       + +K S S          D+I  
Sbjct: 827 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 886

Query: 574 TT--------LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
                     +I   C  G  D A+ML + +  K       +++A++  LC+  +   AL
Sbjct: 887 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 946

Query: 626 VHFRMMKEKGMKP 638
              + M ++G+ P
Sbjct: 947 NLLKEMDKRGICP 959



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 233/598 (38%), Gaps = 118/598 (19%)

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD---------CNIRLNE-- 170
           S+   + D G     V  +L+  + K G V  A E++  M D         CN  L +  
Sbjct: 161 SIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLL 220

Query: 171 ------------------------KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
                                    T+  LI  + K    D A ++  +M + G   +  
Sbjct: 221 RADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTV 280

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y+V+I GLC++  +E A     +M+  G+ PD      LI                   
Sbjct: 281 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALING----------------- 323

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                   LC S           ++A  LL  M   E                + PN   
Sbjct: 324 --------LCKSRRS--------NEAKALLDEMSCAE----------------LKPNVVV 351

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+  +++G  D A  + +EM   G   N   Y+NL+ GLC   +++ +  LL++M 
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
               +P   T N +     R      A  L+ +M   G  P V   +++I  LC+ G+  
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A   L +M  +G  P+   Y+  I G      V LA E+F  +      PD+  YN +I
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL K  RV E+   F +M  +GL+P+  TY+ LI+G+ K+G+++ A   + RML+    
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 591

Query: 567 SPDVI----------------------------------TYTTLIDGLCIAGRPDDAIML 592
             DVI                                   Y  LI  L  +G  + A  +
Sbjct: 592 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + +E+ G  P+   + +LI+GLCK      A      M +KG+ P++  + ALI   
Sbjct: 652 LSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 182/378 (48%), Gaps = 6/378 (1%)

Query: 292 AYNLLQAMIKGEPIADV---GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           A  LL  MI+  P   V    +   +   G  SP  +  D++++T  K G++  A  +  
Sbjct: 141 ANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSP--AVLDVLVDTYKKSGRVQDAAEVVL 198

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M   G   ++   N L+  L  ++ +   +++   M  +G  P  +T +++    C+ +
Sbjct: 199 MMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVR 258

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +   A  ++ +MR +G         +LI  LC+ G   EAF F  DM   G +PD   Y 
Sbjct: 259 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG 318

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A I GL   +R + A  L  ++      P+VV Y  +I G  +     EA  +  EM+  
Sbjct: 319 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 378

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P+  TY+ L+ G CK G +D+A L L +M+ ++S  PD ITY  +I+G        D
Sbjct: 379 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV-RDSHRPDTITYNLIIEGHFRHHSKKD 437

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  L +EME  G +PN  T+  +I GLC+   P  A      M  KG+KP+ FV+  LIS
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 649 AFLSELNPPLAFEVLKEM 666
            +  E N  LA E+  +M
Sbjct: 498 GYCREGNVSLACEIFDKM 515



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/484 (22%), Positives = 197/484 (40%), Gaps = 88/484 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  VG VEE+   F Q++  GL +PN ++Y+ L+    K+  ++  E  ++ M D 
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGL-LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 588

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +      LL+ Y  S   +K  S F  ++D G  +D  ++ IL+   S  G ++ A
Sbjct: 589 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++  ++      +   +  LI G  K +  +KA  + D+M+K G   +   Y+ +I G
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--------LLVKEIWED 266
           LCK+  +  A  +++ +   G+ P+    + LI      G+++        +L   I  D
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768

Query: 267 RDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
             V + +T  C+S        G ++QA  L++ M                 +G  S   S
Sbjct: 769 AFVYSVLTTGCSSA-------GDLEQAMFLIEEMF---------------LRGHAS--IS 804

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           SF+ +++   K GK+   L L   +   G + N     N+I GL  + +L E + +  E+
Sbjct: 805 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864

Query: 386 EE--SGFKPTHFT----------------LNSMFR------------------------- 402
           ++  S     HF+                ++ M R                         
Sbjct: 865 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 924

Query: 403 ----------CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                      LCR+  +  ALNL+++M  +G  P      +L+  L   G   E    L
Sbjct: 925 GCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVL 984

Query: 453 TDMV 456
            +M+
Sbjct: 985 DNML 988


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 253/539 (46%), Gaps = 51/539 (9%)

Query: 113 NSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           +S + D A+ +F  ++    +     F+ LL A +K  + D    L E+M    I  N  
Sbjct: 62  HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ +LI+ F ++S++  AL L  KM K G+         ++ G C  K++  A+ L  +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  PD                                 T+   +++  L  +    +
Sbjct: 182 VEMGYRPD---------------------------------TITFTTLIHGLFLHNKASE 208

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L+  M++               +G   PN  ++ +++N L K G +DLA +L  +M 
Sbjct: 209 AVALVDRMVQ---------------RG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
                 NV +Y+ +ID LC     +++  L  EME  G +P   T +S+  CLC  +   
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L+  M  +   P V     LI    K GK +EA +   +M++    PDI  YS+ I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G     R+D A  +F  + +  C P+VV YN +I+G CKA+R+ E  +LF EM  +GL+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            +  TY  LI+G+ ++ + D A +   +M+  +   P+++TY TL+DGLC  G+ + A++
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMV 491

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           ++  ++     P   T+  +I G+CK  +       F  +  KG+KPD+ ++  +IS F
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 245/523 (46%), Gaps = 28/523 (5%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +VKSR   S      L+  +  +   +    L ++++R G+   N Y+YN L+   C+  
Sbjct: 76  MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRS 134

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
            + L    L +M   G+     TL+ LL  YC+  +   A+++ +++++ G+  D   F+
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+       +  +A  L++RM     + N  T+ V+++G  K+  +D A  L +KM  +
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GEL 256
              ++  +Y  +I  LCK +  + AL L++EM+  G+ P+    S LI+  C+ E   + 
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           + L+ ++ E R +N   +  N+++   V  G + +A  L   MIK               
Sbjct: 315 SRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-------------- 359

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
             ++ P+  ++  +IN      +LD A  +F  M    C  NV  YN LI+G C + R++
Sbjct: 360 --SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E  EL REM + G      T  ++     + +D   A  + ++M   G  P +     L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477

Query: 437 KELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             LCK+GK   AM  F +L     E   P I  Y+  I G+    +V+   +LF  +   
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           G  PDV+ YN +ISG C+     EA+ LF +M   G +P   T
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 241/501 (48%), Gaps = 15/501 (2%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+ + +N LL A+ K    DLV    ++MQ  G  ++ YT   L+  +C   Q   AL+
Sbjct: 82  LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  +++  G+    V  S LL  +     +  A  L+++M +   R +  TF  LIHG  
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             ++  +A+ L D+M + G   +   Y V++ GLCK   +++A  L ++M+ + I  +  
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           I S +I S         L K   ED  +N  T + N  +R  V   S     +L+  +  
Sbjct: 262 IYSTVIDS---------LCKYRHEDDALNLFTEMENKGVRPNVITYS-----SLISCLCN 307

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E  +D    +  + +  ++PN  +F+ +I+  +K+GKL  A  L+ EM +     ++F 
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y++LI+G C  +RL+E+  +   M      P   T N++    C+ + +   + L R+M 
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G        T LI    +      A      MV +G  P+I+ Y+  + GL    +++
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+ +F  +      P +  YNI+I G+CKA +V +  DLF  +  KG+ P V  YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

Query: 542 NGWCKSGNIDQAMLCLSRMLE 562
           +G+C+ G  ++A     +M E
Sbjct: 548 SGFCRKGLKEEADALFRKMRE 568



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 200/423 (47%), Gaps = 52/423 (12%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+R  + +  +D A  L   M+K  P+                P+   F+ +++ + K  
Sbjct: 56  ILRNGLHSMKLDDAIGLFGGMVKSRPL----------------PSIFEFNKLLSAIAKMK 99

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K DL +SL  +M ++G   N++ YN LI+  C  +++  +  LL +M + G++P+  TL+
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C  + +  A+ LV +M   G+ P     T LI  L  H KA EA   +  MVQ 
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLA----------------------------------- 483
           G  P++V Y   + GL     +DLA                                   
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L LF ++   G  P+V+ Y+ +IS LC  +R ++A  L ++MI + + P+V T+N LI+ 
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           + K G + +A      M+ K S  PD+ TY++LI+G C+  R D+A  ++  M  K C P
Sbjct: 340 FVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+  LI G CK  R    +  FR M ++G+  +   +  LI  F    +   A  V 
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458

Query: 664 KEM 666
           K+M
Sbjct: 459 KQM 461



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 4/353 (1%)

Query: 301 KGEP-IADVGVEML-MIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           KG P IA   +++  M + G   S  +  +  I+   L   KLD A+ LF  M +   + 
Sbjct: 24  KGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLP 83

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           ++F +N L+  +    + +    L  +M+  G     +T N +  C CRR  +  AL L+
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM   G+EP +   + L+   C   +  +A   +  MV+ G+ PD + ++  I GL   
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +   A+ L   +   GC P++V Y ++++GLCK   +  A +L N+M    +  +V  Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           + +I+  CK  + D A+   + M E +   P+VITY++LI  LC   R  DA  L ++M 
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           E+   PN +TF ALI    K  +   A   +  M ++ + PD+F + +LI+ F
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 165/631 (26%), Positives = 295/631 (46%), Gaps = 31/631 (4%)

Query: 23  KSRCFM-----SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           K R FM     SP    +  LI     V  +E A  + ++++  G C  N  +YN L+  
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETG-CSLNVVTYNTLIGG 287

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           LC++ +++      KEM+DYG   D +T   ++   C  G+ D+A  + +E+   G +  
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            V +S L+  F + G  D+A ++++ M    ++ N+ T+  LI G  K  R+ +A ++  
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +MTK G+ +D   Y+++I G  +    E A  L +EM+  GI+P+    S +I      G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 255 E---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           E    + L++++  D  +     +   ++      GS   A   L+ M +          
Sbjct: 468 ESERASGLLEQMIAD-GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE--------- 517

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                   ++P+   ++ +I  L   GK+D A+  + EM + G   N F Y  LI G   
Sbjct: 518 -------NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSM 570

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +  LE++ +LL +M  SG  P  F    +     +  ++    + ++ M  +G  P  + 
Sbjct: 571 AGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL 630

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++I  L   G    A   L+ + + G +PD + Y + I G      ++ A+ L  ++ 
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  P +  YN +I G CK+  ++ A ++FN +I KGL P+  TY  LI+G+CK+G+I 
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A+   + ML  E  +PD   Y+ L  G   +G    A+ +  EM  +G A    +F  L
Sbjct: 751 DAIDLYNEML-TEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTL 808

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           + G CK  + +  +    +M +K + P +  
Sbjct: 809 VHGFCKRGKLQETVKFLHVMMDKDIVPSLLT 839



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 282/594 (47%), Gaps = 36/594 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y+Y+ L+EA CK   ++  +  ++EM++ G   +  T   L+   C +G  ++A   
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E+ D+G V D   +  ++    K G  D+A  L++ M    +  N   +  LI GF++
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +   D+A ++  +M+ +G   +   YD +I GLCK  ++  A ++  +M   G   D   
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 243 LSKLITSC---SDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + +I       ++ E  LL+ E+ +     +V T +++ N + +I    G  ++A  LL
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI----GESERASGLL 476

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M     IAD            + PN   +  +I+   ++G   LA    ++MT+    
Sbjct: 477 EQM-----IAD-----------GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +++ YN+LI GL N  +++E+ E   EM E GF+P  FT   +        ++  A  L
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + +M   G  P       +++   K     +    L  M+++G +PD   Y   I  L  
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +  A+ +   I  +G  PD + Y  +ISG CKA  + +A  L +EM  KG+ P ++ 
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI+G+CKS +I  A    + ++ K    P+ +TYTTLIDG C AG   DAI L+NEM
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICK-GLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +G AP+   +  L  G       + AL     M  +G         A+IS+F
Sbjct: 760 LTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG--------YAIISSF 805



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 248/567 (43%), Gaps = 83/567 (14%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D + +S L+ A+ K  +++ A +++E M +    LN  T+  LI G  +   +++A    
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +M   G   D   Y  II GLCK  + + A  L  EM  +G+ P+  + S LI      
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLI------ 355

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                  +  MR     G+ D+A+ +++ M      +  GV+  
Sbjct: 356 -----------------------DGFMR----QGNADEAFKIVKEM------SAAGVQ-- 380

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   PN  ++D +I  L K G++  A  + ++MT+IG M +   YN +I+G    +
Sbjct: 381 --------PNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQH 432

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
             EE++ LL EM + G  P  +T + +   LC+  +   A  L+ +M   G +P      
Sbjct: 433 NKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYA 492

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   C+ G    A   L  M +E   PD+ CY++ I GL ++ ++D A+E + ++   
Sbjct: 493 PLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEK 552

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+   Y  +I G   A  + +AE L ++M+  GL P+   Y  ++ G+ KS N+++ 
Sbjct: 553 GFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKV 612

Query: 554 MLCLSRMLEK-----------------ESGS-----------------PDVITYTTLIDG 579
              L  MLEK                  SG                  PD + Y +LI G
Sbjct: 613 SSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISG 672

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C A   + A+ L +EM +KG  P    + ALI G CK D    A   F  +  KG+ P+
Sbjct: 673 FCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPN 732

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  LI  +    +   A ++  EM
Sbjct: 733 CVTYTTLIDGYCKAGDIRDAIDLYNEM 759



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 52/507 (10%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M+   I  +  T+  LI  + K   ++ A ++ ++M ++G + +   Y+ +IGGLC+   
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +E A     EM+  G+ PD                                      +I+
Sbjct: 294 IEEAFGYKKEMEDYGLVPD---------------------------------GFTYGAII 320

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G  DQA  LL  M             LM       PN   +  +I+  ++ G  
Sbjct: 321 NGLCKRGRPDQAKCLLDEM---------SCAGLM-------PNVVVYSTLIDGFMRQGNA 364

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  + +EM+  G   N   Y+NLI GLC   R+  +  +L++M + G+     T N +
Sbjct: 365 DEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                R+ +   A  L+ +MR  G  P V   +++I  LC+ G++  A   L  M+ +G 
Sbjct: 425 IEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P+   Y+  I G        LA E  + +      PD+  YN +I GL    ++ EA +
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDG 579
            ++EM+ KG  P+  TY  LI+G+  +GN+++A   L +ML   SG +P+   Y  +++G
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML--NSGLNPNDFIYAQILEG 602

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
              +   +        M EKG  P+   +  +I  L      +AA+    ++++ G+ PD
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
             ++ +LIS F    +   A  +L EM
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEM 689


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 279/606 (46%), Gaps = 52/606 (8%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LIR       + E +  F  +++ G CV  N + N LL A+ K   VDL     ++   
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSIN-ACNALLGAIVKVGWVDLAWKVYEDFVK 217

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDK 153
            G   + YTL  ++   C  G+ D      +E+ + G + D   ++ L+ A+ + G V +
Sbjct: 218 SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE 277

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M    ++    T+  LI+G  K+   ++A ++ D+M   G   +AA ++ ++ 
Sbjct: 278 AFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLV 337

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             C+ + +  A ++++EM   G+ PD    S ++   S  GEL                 
Sbjct: 338 ESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELG---------------- 381

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                                  +A+   E +  VG+           P+T  + I+IN 
Sbjct: 382 -----------------------RALAYFEKMKGVGL----------VPDTVIYTILING 408

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             ++  +  AL +  EM + GC+ +V  YN L++GLC    L+++ EL +EM E G  P 
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +TL ++    C+  ++  AL+L   M ++  +P V     L+   CK G+  +A     
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM+     P  + +S  I G   +  V  A  L+ ++   G  P +V  N II G  +A 
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            +++A D  N MI++G+ P   TYN LIN + K  N D+A   ++ M E+    P+++TY
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM-EERGLLPNLVTY 647

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             ++ G    GR  +A M+ ++M +KG  P++ T+ +LI G    D  + A      M +
Sbjct: 648 NAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707

Query: 634 KGMKPD 639
           +G  PD
Sbjct: 708 RGFVPD 713



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 266/567 (46%), Gaps = 63/567 (11%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           LL      G  D A  V+ + +  G  V+ +  +I++ A  K G++D     +  M++  
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  +  T+  L++ + ++  V +A  L D M   G       Y+ +I GLCK    E A 
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314

Query: 226 QLYSEMKGSGITPDFEILSK-LITSCSDEGELTLLVKEIWE-DRDVNTMTLLCNSIMRIL 283
           ++  EM G G+ P+    +  L+ SC  E        ++WE +R  N M  L   ++  L
Sbjct: 315 RVLDEMLGVGLCPNAATFNPMLVESCRKE--------DVWEAERVFNEM--LQRGVVPDL 364

Query: 284 VSNGSIDQAYN----LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +S  SI   ++    L +A+   E +  VG+           P+T  + I+IN   ++  
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVGL----------VPDTVIYTILINGYCRNDD 414

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  AL +  EM + GC+ +V  YN L++GLC    L+++ EL +EM E G  P  +TL  
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL-- 472

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                                            T LI   CK G   +A      M    
Sbjct: 473 ---------------------------------TTLIHGYCKDGNMTKALSLFETMTLRS 499

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD+V Y+  + G   +  ++ A EL+ D+ +    P  ++++I+I+G C    V+EA 
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L++EM  KG+ P++ T N +I G+ ++GN+ +A   L+ M+  E   PD ITY TLI+ 
Sbjct: 560 RLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS-EGVPPDCITYNTLINS 618

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
                  D A  L N MEE+G  PN +T+ A++ G  +  R + A +    M +KG+ PD
Sbjct: 619 FVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPD 678

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              + +LI+ ++S+ N   AF V  EM
Sbjct: 679 KSTYTSLINGYVSKDNMKEAFRVHDEM 705



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 256/550 (46%), Gaps = 21/550 (3%)

Query: 18  AQDVVKSRCF-MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           A  +++ R F +S  A   L+  +  VG V+ A  +++   + G  V N Y+ N ++ AL
Sbjct: 176 AFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIV-NVYTLNIMVNAL 234

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE- 135
           CK   +D V + L EM++ G   D  T   L+  YC  G   +A  + + +   G     
Sbjct: 235 CKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGL 294

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++ L+    K G  ++A  +++ M    +  N  TF  ++    +K  V +A ++F++
Sbjct: 295 FTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNE 354

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDE 253
           M + G   D   +  I+G   +N +L  AL  + +MKG G+ PD  I + LI     +D+
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
               L ++    +R      +  N+++  L     +D A  L + M++            
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVE------------ 462

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G V P+  +   +I+   KDG +  ALSLF  MT      +V  YN L+DG C   
Sbjct: 463 ---RG-VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            +E++ EL  +M      P++ + + +    C    V  A  L  +M+ +G +P +    
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +IK   + G   +A  FL  M+ EG  PD + Y+  I   +  +  D A  L  ++   
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P++V YN I+ G  +  R+ EAE + ++MI KG+ P  +TY  LING+    N+ +A
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698

Query: 554 MLCLSRMLEK 563
                 ML++
Sbjct: 699 FRVHDEMLQR 708



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 179/409 (43%), Gaps = 71/409 (17%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + ++  ++K G +DLA  ++ +  + G + NV+  N +++ LC   +L+     L EMEE
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK--- 444
            G      T N++    CRR  V  A  LV  M  +G +P +     LI  LCK G    
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 312

Query: 445 --------------------------------AMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
                                             EA R   +M+Q G +PD++ +S+ +G
Sbjct: 313 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 473 -----------------------------------GLIDIKRVDLALELFRDICAHGCCP 497
                                              G      V  AL++  ++   GC  
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DVV YN +++GLC+ + + +A++LF EM+ +G+ P   T   LI+G+CK GN+ +A L L
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA-LSL 491

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
              +   S  PDV+TY TL+DG C  G  + A  LW +M  +   P+ I+F  LI G C 
Sbjct: 492 FETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCS 551

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 A   +  MKEKG+KP +     +I  +L   N   A + L  M
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 4/234 (1%)

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           LLI+   +  K  E       + + GF   I   +A +G ++ +  VDLA +++ D    
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   +V   NI+++ LCK  ++       +EM  KG+   + TYN L+N +C+ G + +A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              +  M  K    P + TY  LI+GLC  G  + A  + +EM   G  PN  TF  ++ 
Sbjct: 279 FGLVDCMAGK-GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLV 337

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL--SELNPPLA-FEVLK 664
             C+ +    A   F  M ++G+ PD+  F +++  F    EL   LA FE +K
Sbjct: 338 ESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           + A  L + ++  GL +PN  +YN +L    +   +   EM L +M D G   DK T T 
Sbjct: 626 DRAFFLINNMEERGL-LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
           L+  Y +     +A  V +E++  G+V +  F
Sbjct: 685 LINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 273/563 (48%), Gaps = 28/563 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  +YN +L +LC    +D        ++  G   D+ T + L+  +  + + D AL 
Sbjct: 156 APNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALY 215

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           + +E+  +    + V ++ LL    + GE +KA  + E++  D     N  T+ V++ G 
Sbjct: 216 LLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGL 275

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K     +A  ++++M  +    D   Y  +I GLC++  ++ A ++YSEM  +G+ PD 
Sbjct: 276 CKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDV 335

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-----CNSIMRILVSNGSIDQAYNL 295
            I + L+      G     V E W+  D  +++ +      N +++ L   G +D+A +L
Sbjct: 336 VIYNSLLKGFCHAGR----VGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDL 391

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + + K +               ++SP+  +F  +I+ L + G  + +L +  E    G 
Sbjct: 392 WELLEKDD---------------SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGK 436

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             + F Y+++I GLC   RL+++ +L  ++    FKP     N++    C+      A+ 
Sbjct: 437 ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIR 496

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  +M      P       LI  LCK  K +EA RF  +M+++G + D+  Y + I GL 
Sbjct: 497 VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLC 556

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSV 534
             K++D AL L+  I   G   DVV +NI+I GLC A +V EA  L +EM  K    P+V
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNV 616

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN L++G+ ++G  D+A      +LE     PD+I+Y T I GLC   R  + + L N
Sbjct: 617 VTYNTLMDGFYETGCFDKAASLWMAILEN-GLVPDIISYNTRIKGLCSCNRTPEGVQLLN 675

Query: 595 EMEEKGCAPNRITFMALITGLCK 617
           EM   G  P  IT+  L+  + K
Sbjct: 676 EMLASGIIPTAITWNILVRAVIK 698



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 265/576 (46%), Gaps = 37/576 (6%)

Query: 7   RARRI----APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           RARR     A    L+      R   +      ++R L   G ++ A  LFD ++  GL 
Sbjct: 132 RARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGL- 190

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +Y+ L+    K+  +D     L EM  Y    D      LL     +G+F+KA+ 
Sbjct: 191 APDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMR 250

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           V+ +++       ++  ++++L    K G   +A ++ ERM   N + +  T+  +IHG 
Sbjct: 251 VWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGL 310

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI--TP 238
            + + VD A +++ +M K+G   D  +Y+ ++ G C   ++  A + +  M  SGI    
Sbjct: 311 CRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVT 370

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            + I+ K +     +G +     ++WE    D  ++   +  ++++  L   G  +++  
Sbjct: 371 SYNIMLKGLF----DGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQ 426

Query: 295 LLQ-AMIKGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLL 335
           +L+ A   G+ + +     ++                  I   +  PN+  ++ +IN   
Sbjct: 427 ILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFC 486

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +  K   A+ ++ +M +  C      YN LI GLC + +  E+    REM E G      
Sbjct: 487 QASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVN 546

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  S+ R LCR + + GAL L  ++  +G +  V  + +LI  LC  GK  EA + L++M
Sbjct: 547 TYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEM 606

Query: 456 VQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            ++    P++V Y+  + G  +    D A  L+  I  +G  PD+++YN  I GLC   R
Sbjct: 607 KEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNR 666

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             E   L NEM+  G+IP+  T+N+L+    K G I
Sbjct: 667 TPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 223/504 (44%), Gaps = 55/504 (10%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N +T+ +++     +  +D+A+ LFD +   G A D   Y  ++ G  KN +L+ AL
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  EM    + PD    + L+  C                                   
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGC---------------------------------FR 241

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG  ++A  + + +++     D G           SPN ++++++++ L K G    A  
Sbjct: 242 NGEFEKAMRVWEQLVR-----DPGA----------SPNLATYNVMLDGLCKLGMFKEAGD 286

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           ++  M       ++  Y  +I GLC S  ++ +  +  EM ++G  P     NS+ +  C
Sbjct: 287 VWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFC 346

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG---KAMEAFRFLTDMVQEGFLP 462
               V  A      M V G      +N +++K L   G   KA + +  L     +   P
Sbjct: 347 HAGRVGEAWKFWDSMSVSGIRNVTSYN-IMLKGLFDGGMVDKATDLWELLEK--DDSLSP 403

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+V +S  I GL +    + +L++  +    G   D  +Y+ +ISGLCK  R+ +A  L+
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            ++      P+   YN LING+C++     A+   S+M E +  SP  ITY TLI GLC 
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC-SPTTITYNTLIHGLCK 522

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           A +  +A     EM EKGC  +  T+ +LI GLC+  +   AL  +  + +KG++ D+ +
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
              LI    S      A ++L EM
Sbjct: 583 HNILIHGLCSAGKVDEASQLLSEM 606



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 6/370 (1%)

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT----VSPNTSSFDIIINTLLKDGKLD 341
           N  +     LL A ++    +D       +  G     ++PN  +++I++ +L   G LD
Sbjct: 117 NPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLD 176

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A++LF  +   G   +   Y+ L+ G   +NRL+ +  LL EM     +P     N++ 
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALL 236

Query: 402 RCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               R  +   A+ +  ++ R  G  P +    +++  LCK G   EA      MV    
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNH 296

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            PD++ Y   I GL     VD A  ++ ++   G  PDVV YN ++ G C A RV EA  
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            ++ M   G I +V +YN+++ G    G +D+A      + + +S SPD++T++T+I GL
Sbjct: 357 FWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGL 415

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C  G  + ++ +  E    G   +  ++ ++I+GLCK  R   A+  +  +     KP+ 
Sbjct: 416 CEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNS 475

Query: 641 FVFVALISAF 650
            ++ ALI+ F
Sbjct: 476 HIYNALINGF 485



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 36/220 (16%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A +        +++++  C +     G LIR L     ++ A  L++Q+  +GL   
Sbjct: 520 LCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQT- 578

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDY-GWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           +   +N L+  LC +  VD     L EM++      +  T   L+  +  +G FDKA S+
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASL 638

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +  I+++G V + +                                  ++   I G    
Sbjct: 639 WMAILENGLVPDII----------------------------------SYNTRIKGLCSC 664

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           +R  + +QL ++M  SG    A  +++++  + K   +++
Sbjct: 665 NRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQI 704


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 234/504 (46%), Gaps = 60/504 (11%)

Query: 173 FCVLIHGFVKKSRVDKALQLF-DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           + +++    +     +AL++F  +M + G A     Y+ II GLCK+  L   ++L+ E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  PD    + LI S                         LC +        G +++
Sbjct: 64  VERGHHPDVVTYNTLIDS-------------------------LCKA--------GDLEE 90

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L      G+          M  +G V PN  ++ ++IN L K G++D A  L +EMT
Sbjct: 91  ARRL-----HGD----------MSSRGCV-PNVVTYSVLINGLCKVGRIDEARELIQEMT 134

Query: 352 QIGC--MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK--PTHFTLNSMFRCLCRR 407
           +  C  + N+  YN+ +DGLC  +   E+ EL+R + +   +  P   T +++   LC+ 
Sbjct: 135 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 194

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A ++   M   G+ P V     L+  LCK  K   A   +  MV +G  PD++ Y
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 254

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDV-----VAYNIIISGLCKAQRVAEAEDLF 522
           S  +       RVD ALEL   + + GC P+V     V +NI+I+G CKA    +A  LF
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALF 314

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM+ K L P V T+  LI+G CK+G ++ A   L  ++      P+V+TY  L+ GLC 
Sbjct: 315 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNLGVPPNVVTYNALVHGLCK 373

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           +GR ++A     EM   GC P+ IT+ +L+  LC+  R   AL     +K  G  PD   
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  L+           A  VL+EM
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEM 457



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 245/512 (47%), Gaps = 25/512 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIE-RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++I+L +  + G+  +A E+    M    +     T+  +I+G  K + +   ++LF+++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            + G   D   Y+ +I  LCK   LE A +L+ +M   G  P+    S LI      G  
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 255 -ELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            E   L++E+     DV    +  NS +  L       +A  L++++  G          
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-------- 175

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                  VSP+T +F  +I+ L K G++D A S+F +M   G + NV  YN L++GLC +
Sbjct: 176 ------RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV--- 429
           +++E ++ ++  M + G  P   T + +    C+   V  AL L+  M  +G  P V   
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 430 --KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                 +LI   CK G   +A     +MV +   PD++ + A I GL    +V+ A ++ 
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  P+VV YN ++ GLCK+ R+ EA     EM++ G +P   TY  L+   C++
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
              D A+  +S  L+     PD +TY  L+DGL  +G+ + AI +  EM  KG  P+  T
Sbjct: 410 SRTDDALQLVSE-LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           F A  +GL +       +   R++  KGM PD
Sbjct: 469 FAACFSGLHRSGNLAGTMELLRVVLAKGMLPD 500



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 251/553 (45%), Gaps = 61/553 (11%)

Query: 55  QVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNS 114
           ++ R+G+  P   +YN ++  LCKS  +       +E+ + G   D  T   L+   C +
Sbjct: 27  EMARDGV-APTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 85

Query: 115 GQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--DDCNIRLNEK 171
           G  ++A  +  ++   G V   V +S+L+    K G +D+A ELI+ M    C++  N  
Sbjct: 86  GDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 145

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           T+   + G  K+S   +A +L   +       + D   +  +I GLCK  Q++ A  ++ 
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M   G  P                               N +T   N+++  L     +
Sbjct: 206 DMIAGGYVP-------------------------------NVITY--NALVNGLCKADKM 232

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++A+ ++++M+                KG V+P+  ++ ++++   K  ++D AL L   
Sbjct: 233 ERAHAMIESMVD---------------KG-VTPDVITYSVLVDAFCKASRVDEALELLHG 276

Query: 350 MTQIGCMQNVFL-----YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           M   GC  NV +     +N LI G C +   E++  L  EM     +P   T  ++   L
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A +++  M   G  P V     L+  LCK G+  EA +FL +MV  G +PD 
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y + +  L    R D AL+L  ++ + G  PD V YNI++ GL K+ +  +A  +  E
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ KG  P   T+    +G  +SGN+   M  L  +L K    PD  T ++++D +C +G
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAK-GMLPDATTCSSILDWVCRSG 515

Query: 585 RPDDAIMLWNEME 597
           + DD   +  E E
Sbjct: 516 KLDDVKAMIKEFE 528



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 220/485 (45%), Gaps = 29/485 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF+++   G   P+  +YN L+++LCK+  ++       +M   G   +  T + L+   
Sbjct: 59  LFEELVERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117

Query: 112 CNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           C  G+ D+A  +  E+         +   ++  L    K     +ACEL+  + D ++R+
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 177

Query: 169 NEKT--FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           +  T  F  LI G  K  ++D+A  +FD M   G+  +   Y+ ++ GLCK  ++E A  
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSI-MRIL 283
           +   M   G+TPD    S L+ +      +   L +      R      L+ + +   IL
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 284 VSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++     G+ +QA  L + M+                   + P+  +F  +I+ L K G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAK----------------NLQPDVMTFGALIDGLCKAGQ 341

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A  +   M  +G   NV  YN L+ GLC S R+EE+ + L EM  SG  P   T  S
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LCR      AL LV +++  G +P      +L+  L K GK  +A   L +MV +G
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   ++A   GL     +   +EL R + A G  PD    + I+  +C++ ++ + +
Sbjct: 462 HQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVK 521

Query: 520 DLFNE 524
            +  E
Sbjct: 522 AMIKE 526



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 210/452 (46%), Gaps = 29/452 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV- 63
           L +A  +   R L  D+    C  +      LI  L  VG ++EA  L  ++ R+   V 
Sbjct: 82  LCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 141

Query: 64  PNNYSYNCLLEALCK-SCSVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDKA 120
           PN  +YN  L+ LCK S + +  E+ ++ ++D       D  T + L+   C  GQ D+A
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACEL-MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 200

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            SVF+++I  G+V   + ++ L+    K  ++++A  +IE M D  +  +  T+ VL+  
Sbjct: 201 CSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 260

Query: 180 FVKKSRVDKALQLFDKMTKSG-----FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           F K SRVD+AL+L   M   G        D   ++++I G CK    E A  L+ EM   
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320

Query: 235 GITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            + PD      LI      G++     + ++  +  V    +  N+++  L  +G I++A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 380

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
              L+ M+                 G V P++ ++  ++  L +  + D AL L  E+  
Sbjct: 381 CQFLEEMVS---------------SGCV-PDSITYGSLVYALCRASRTDDALQLVSELKS 424

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +   YN L+DGL  S + E++  +L EM   G +P  FT  + F  L R  ++ G
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAG 484

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
            + L+R +  +G  P     + ++  +C+ GK
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSGK 516



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 499 VVAYNIIISGLCKAQRVAEAEDLF-NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           V  YNI++  LC+A   A A ++F  EM   G+ P++ TYN +ING CKS ++   M   
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             ++E+    PDV+TY TLID LC AG  ++A  L  +M  +GC PN +T+  LI GLCK
Sbjct: 61  EELVER-GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119

Query: 618 CDRPRAALVHFRMMKEKG--MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             R   A    + M  K   + P++  + + +     +     A E+++ +
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 170


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 247/541 (45%), Gaps = 51/541 (9%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDH-GWVDEHVFSILLVAFSKWGEVDKACELI 158
           + YTL  ++  YC + QF +  +V +E+     + D    ++++ A  + G+V+ A  LI
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + M    I+    T+  ++ G ++  R DKA ++F  M   G A D   ++++IGG C+ 
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            +LE AL+ Y EM+G  +TPD    S LI   +  GE+    + + E R+   M      
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLM------ 331

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                                                      P+   + ++I    + G
Sbjct: 332 -------------------------------------------PDGVIYTMVIGGFCRAG 348

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  AL +  EM   GC+ +V  YN L++GLC   RL ++ ELL EM+E G  P   T  
Sbjct: 349 LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT 408

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    CR  ++  AL     +  Q   P +     LI  +C+ G   +A     DM   
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              P+ V YS  I    +  +VD A     ++   G  P+++ YN II G C++  V++ 
Sbjct: 469 EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKG 528

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +    +M    ++P + TYN LI+G+ K G + +A   L +++E E+  PD +TY  +I 
Sbjct: 529 QQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIIS 587

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G  + G   +A  ++ +M  +G  P+R T+M++I G       + +      M +KG+ P
Sbjct: 588 GFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647

Query: 639 D 639
           D
Sbjct: 648 D 648



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 203/398 (51%), Gaps = 10/398 (2%)

Query: 275 LCNSIMRILVSNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           L     R+++S+ S    Y L   + +  K     +V   +  + K  V P+  + ++++
Sbjct: 142 LTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMV 201

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   + G ++ A++L   M   G    +  YN+++ GL  + R +++ E+ R M+  G  
Sbjct: 202 DARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVA 261

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + N +    CR  ++  AL   ++MR +   P V   + LI    + G+   A  +
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISG 508
           L +M + G +PD V Y+  IGG     R  L LE  R   ++ A GC PDVV YN +++G
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFC---RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK +R+++AE+L NEM  +G+ P + T+  LI+G+C+ GNI++A+     + ++    P
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL-RP 437

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D++TY TLIDG+C  G    A  LW++M  +   PN +T+  LI   C+  +   A    
Sbjct: 438 DIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFL 497

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             M  KG+ P++  + ++I  +    N     + L +M
Sbjct: 498 DEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 3/342 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +   + +P    FD++I T  +  K   A   FR +            N L+  L  +  
Sbjct: 80  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGW 139

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              + +  R +  S  +   +TLN M    C+         ++ +M  +   P V  + +
Sbjct: 140 PHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++    + G    A   +  MV +G  P +V Y++ + GL+   R D A E+FR + A G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDV ++N++I G C+A  + EA   + EM  + + P V +++ LI  + + G +D A 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 555 LCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
             L  M  +E G  PD + YT +I G C AG   +A+ + +EM   GC P+ +T+  L+ 
Sbjct: 320 EYLREM--REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLN 377

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           GLCK  R   A      MKE+G+ PD+  F  LI  +  + N
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGN 419



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 186/441 (42%), Gaps = 53/441 (12%)

Query: 26  CFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           C ++P    F  LI      G +EEA   + ++ R     P+  S++CL+    +   +D
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFTRRGEMD 316

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL 142
                L+EM+++G   D    T ++  +C +G   +AL V +E++  G + + V ++ LL
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLL 376

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               K   +  A EL+  M +  +  +  TF  LIHG+ +   ++KALQ FD ++     
Sbjct: 377 NGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLR 436

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            D   Y+ +I G+C+   L  A +L+ +M    I P+    S LI S  ++G+       
Sbjct: 437 PDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ------- 489

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                                     +D A+  L  M+                KG V P
Sbjct: 490 --------------------------VDNAFAFLDEMVN---------------KGIV-P 507

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  +++ II    + G +        +M     M ++  YN LI G     ++ E++ LL
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + ME    +P   T N +        ++  A  + +KM  +G EP       +I      
Sbjct: 568 KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVA 627

Query: 443 GKAMEAFRFLTDMVQEGFLPD 463
           G + ++F+   +M+Q+G  PD
Sbjct: 628 GNSKKSFQLHDEMLQKGLAPD 648


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 179/613 (29%), Positives = 283/613 (46%), Gaps = 42/613 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    ++ L   + ++   DLV    K+M+  G  ++ YTL+ ++   C   +   A S 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +II  G+  + V FS L+      G V +A EL++RM +   +    T   L++G   
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V  A+ L D+M ++GF  +   Y  ++  +CK+ Q  +A++L  +M+   I  D   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 243 LSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S +I     +G L     L  E+ E +      ++  +++R     G  D    LL+ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK +                ++P+  +F  +I+  +K+GKL  A  L +EM Q G   + 
Sbjct: 309 IKRK----------------ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y +LIDG C  N+L+++  +L  M   G  P   T N +    C+   +   L L RK
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 420 MRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M ++G     V +NT LI+  C+ GK   A     +MV     PDIV Y   + GL D  
Sbjct: 413 MSLRGVVADTVTYNT-LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
             + ALE+F  I       D+  YNIII G+C A +V +A DLF  +  KG+ P V TYN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I G CK G++ +A L L R +E++  SP+  TY  LI      G    +  L  E++ 
Sbjct: 532 IMIGGLCKKGSLSEADL-LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN--- 655
            G + +  T              R AL     M + G +PD+F F  L+  F  E N   
Sbjct: 591 CGFSVDASTL-------------RFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASV 637

Query: 656 --PPLAFEVLKEM 666
              P  F+ +K M
Sbjct: 638 YDAPTLFKNMKAM 650



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 260/596 (43%), Gaps = 44/596 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +++ L+  LC    V      +  M + G      TL  L+   C +G+   A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + +++ G+  +E  +  +L    K G+   A EL+ +M++  I+L+   + ++I G  K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              +D A  LF++M   GF +D  +Y  +I G C   + +   +L  +M    ITPD   
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 243 LSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI     EG+L     L KE+ + R ++  T+   S++        +D+A ++L   
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLD-- 376

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        LM+ KG   PN  +F+I+IN   K   +D  L LFR+M+  G + + 
Sbjct: 377 -------------LMVSKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI G C   +LE + EL +EM     +P   +   +   LC   +   AL +  K
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +     E  +    ++I  +C   K  +A+     +  +G  PD+  Y+  IGGL     
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE--------------- 524
           +  A  LFR +   G  P+   YNI+I          ++  L  E               
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRF 602

Query: 525 -------MITKGLIPSVATYNLLINGWCKSGNID-QAMLCLSRMLEKESGSPDVITYTTL 576
                  M+  G  P V T+  L+  +C   N        L + ++     P+V+TY T+
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           I GL           + ++M E+GC PN +T    I+GLCK D   +A++  R M+
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 178/411 (43%), Gaps = 50/411 (12%)

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D A +L Q M +  P                 P    F  + + + +  + DL L L ++
Sbjct: 54  DDAVDLFQEMTRSRP----------------RPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   N++  + +I+  C   +L  ++  + ++ + G++P   T +++   LC    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  AL LV +M   GH+P +     L+  LC +GK  +A   +  MV+ GF P+ V Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  +    +  LA+EL R +       D V Y+III GLCK   +  A +LFNEM  KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------------------- 564
               +  Y  LI G+C +G  D     L  M++++                         
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 565 ---------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
                      SPD +TYT+LIDG C   + D A  + + M  KGC PN  TF  LI G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK +     L  FR M  +G+  D   +  LI  F       +A E+ +EM
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 39/489 (7%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++ A  LF++++ +G    +   Y  L+   C +   D     L++M       D   
Sbjct: 261 GSLDNAFNLFNEMEIKGF-KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + L+  +   G+  +A  +  E+I  G   + V ++ L+  F K  ++DKA  +++ M 
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 N +TF +LI+G+ K + +D  L+LF KM+  G  +D   Y+ +I G C+  +LE
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSI 279
           +A +L+ EM    + PD      L+    D GE    + EI+E  + + M L   + N I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL-EIFEKIEKSKMELDIGIYNII 498

Query: 280 MRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +  + +   +D A++L  ++ +KG                 V P+  +++I+I  L K G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKG-----------------VKPDVKTYNIMIGGLCKKG 541

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A  LFR+M + G   N   YN LI          +S +L+ E++  GF     TL 
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLR 601

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC--KHGKAMEAFRFLTDMV 456
                         AL+ + +M   GHEP V   T L++  C  ++    +A     +M 
Sbjct: 602 F-------------ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMK 648

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G+ P++V Y+  I GL++   +     +   +   GC P+ V  +  ISGLCK     
Sbjct: 649 AMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHG 708

Query: 517 EAEDLFNEM 525
            A  L  +M
Sbjct: 709 SAILLLRKM 717



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 1/317 (0%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A+ LF+EMT+      +  ++ L   +  + + +   +L ++ME  G     +T
Sbjct: 50  DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           L+ M  C CR + +  A + + K+   G+EP     + LI  LC  G+  EA   +  MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P ++  +A + GL    +V  A+ L   +   G  P+ V Y  ++  +CK+ + A
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +L  +M  + +      Y+++I+G CK G++D A    + M E +    D+I YTTL
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTL 288

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I G C AGR DD   L  +M ++   P+ + F ALI    K  + R A    + M ++G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 637 KPDMFVFVALISAFLSE 653
            PD   + +LI  F  E
Sbjct: 349 SPDTVTYTSLIDGFCKE 365



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 207/435 (47%), Gaps = 22/435 (5%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L +D++K +  ++P  + F  LI C    G + EA  L  ++ + G+  P+  +Y  L++
Sbjct: 304 LLRDMIKRK--ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDTVTYTSLID 360

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             CK   +D     L  M   G G +  T   L+  YC +   D  L +F ++   G V 
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + V ++ L+  F + G+++ A EL + M    +R +  ++ +L+ G       +KAL++F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           +K+ KS    D  +Y++II G+C   +++ A  L+  +   G+ PD +  + +I     +
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540

Query: 254 GELT---LLVKEIWED-RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           G L+   LL +++ ED    N  T   N ++R  +  G   ++  L++ + +     D  
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTY--NILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 310 V------EMLMIFKGTVSPNTSSFDIIINT--LLKDGKLDLALSLFREMTQIGCMQNVFL 361
                   +  + K    P+  +F  ++    L ++  +  A +LF+ M  +G   NV  
Sbjct: 599 TLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVT 658

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG-ALNLVRKM 420
           YN +I GL N N + +   +L +M E G +P   T ++    LC +QD+ G A+ L+RKM
Sbjct: 659 YNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC-KQDLHGSAILLLRKM 717

Query: 421 RVQGHEPWVKHNTLL 435
                +   K   L+
Sbjct: 718 ENDNEDVTTKKKILI 732


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 231/488 (47%), Gaps = 56/488 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           NE T+  LIHG  K  ++D+A +L D+M   G     A+++ +I GLCK  +   AL  +
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             + G+  TPD    + L+ +                                 LV +G 
Sbjct: 89  KTVAGTKCTPDIITFNILVDA---------------------------------LVKSGR 115

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +++A+ + ++M                      PN  ++  +IN L KDGKLD A+ L  
Sbjct: 116 VEEAFQIFESMHT---------------SSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M + GC  NV  Y+ L++GLC + R ++ + LL+EM   GF+P     N++   LC+ +
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  AL LV+ M   G  P V     L++  C+  +   AFR +  M + G  PD++ Y+
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV------AEAEDLF 522
             I GL    R+D A  L + + A  C PDV+ Y+ II GLCK  RV        A ++ 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M   G  P+  TY ++I G C++    QA+  L RM++ E   PD+ +++ +I  LC 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCK 399

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           +   D A  ++  M E+ C PN + + ALI GL K      A+  F +M E   +P +  
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVAT 458

Query: 643 FVALISAF 650
           + +++   
Sbjct: 459 YNSVLDGL 466



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 275/597 (46%), Gaps = 67/597 (11%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL  L+R     G   +A  LF    RE  CVPN ++Y  L+  LCK+  +D     L E
Sbjct: 4   ALNLLVR----AGQHGQAVQLF----REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M+D G          +++  C +G+F  AL  F  +       + + F+IL+ A  K G 
Sbjct: 56  MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 151 VDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           V++A ++ E M   +  L N  T+  +I+G  K  ++D+A++L D M ++G   +   Y 
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           V++ GLCK  + +    L  EM   G  PD                              
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPD------------------------------ 205

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               ++ N+++  L  +  +D+A  L+Q MI+                    P   +++ 
Sbjct: 206 ---VIMYNTLLNGLCKSRRLDEALELVQLMIRS----------------GCYPTVVTYNS 246

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++    +  ++D A  L + M++ GC  +V  YN +I GLC   RL+++  LL++M  + 
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 390 FKPTHFTLNSMFRCLCR--RQD----VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             P   T +++   LC+  R D    +  A  ++  M+  G  P      ++I+ LC+  
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K+ +A   L  M+    +PD+  +S  IG L     +D A ++F  +    C P+ VAY 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GL K   V +A  +F E++ +   P VATYN +++G C  G I++A+  +  M+ K
Sbjct: 427 ALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           E   PD  +Y  LI GLC     ++A  L+  +E KG A     +  L+  LCK  R
Sbjct: 486 EC-FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 193/397 (48%), Gaps = 24/397 (6%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            S++  L   G +DQAY LL  M       D G+           P  +  + +I  L K
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEM------RDRGI----------PPGVAVHNGVIKGLCK 77

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHF 395
            G+   AL  F+ +    C  ++  +N L+D L  S R+EE++++   M  S    P   
Sbjct: 78  AGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  ++   LC+   +  A+ L+  M   G  P V   ++L++ LCK G+  + F  L +M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            + GF PD++ Y+  + GL   +R+D ALEL + +   GC P VV YN ++   C++++V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  L   M  +G  P V  YN +I G C+   +D A   L +M+      PDVITY+T
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC-VPDVITYST 316

Query: 576 LIDGLCIAGRPDD------AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           +IDGLC   R D       A  +   M++ GC PN  T+  +I GLC+  + + AL   R
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M +  + PD+  F  +I +     +   A+++   M
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 5/321 (1%)

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +N L++ G+   A+ LFRE     C+ N F Y +LI GLC + +L+++YELL EM + G 
Sbjct: 5   LNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N + + LC+      AL   + +      P +    +L+  L K G+  EAF+
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 451 FLTDM-VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
               M      LP++V Y+  I GL    ++D A+EL   +   GCCP+V+ Y++++ GL
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CKA R  +   L  EM  +G  P V  YN L+NG CKS  +D+A L L +++ +    P 
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA-LELVQLMIRSGCYPT 240

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+TY +L++  C + + D A  L   M E+GC P+ I +  +I GLC+  R   A    +
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 630 MMKEKGMKPDMFVFVALISAF 650
            M      PD+  +  +I   
Sbjct: 301 QMVAARCVPDVITYSTIIDGL 321



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 231/538 (42%), Gaps = 69/538 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A R        + V  ++C         L+  L   G VEEA  +F+ +     C+P
Sbjct: 75  LCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP 134

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  ++  LCK   +D     L  M + G   +  T + L++  C +G+ DK  ++ 
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G+  D  +++ LL    K   +D+A EL++ M          T+  L+  F + 
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +VD+A +L   M++ G   D   Y+ +I GLC++ +L+ A  L  +M  +   PD    
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 244 SKLITS-CSD-----------EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           S +I   C D             E+  ++K+     +  T  ++   + R   S     Q
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ----Q 370

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL+ MI  E                V P+ SSF ++I +L K   LD A  +F  M+
Sbjct: 371 ALALLRRMIDSE----------------VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +  C  N   Y  LIDGL     ++++  +   M ES F+P   T NS            
Sbjct: 415 ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS------------ 461

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
                                  ++  LC  G+  EA R +  M+ +   PD   Y A I
Sbjct: 462 -----------------------VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            GL  +  V+ A ELF+ + A G   +V  YN++++ LCK +R+++A  + N++I  G
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 2/276 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  FT  S+   LC+   +  A  L+ +MR +G  P V  +  +IK LCK G+  +A  +
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLC 510
              +      PDI+ ++  +  L+   RV+ A ++F  +  +  C P+VV Y  +I+GLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  ++  A +L + M   G  P+V TY++L+ G CK+G  D+    L  M  +    PDV
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDV 206

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           I Y TL++GLC + R D+A+ L   M   GC P  +T+ +L+   C+  +   A    ++
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E+G  PD+  +  +I+    +     A  +LK+M
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 6/226 (2%)

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +HG+A++ FR      +E  +P+   Y + I GL    ++D A EL  ++   G  P V 
Sbjct: 13  QHGQAVQLFR------EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +N +I GLCKA R  +A   F  +      P + T+N+L++   KSG +++A      M
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                  P+V+TYTT+I+GLC  G+ D AI L + M E GC PN IT+  L+ GLCK  R
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                   + M  +G +PD+ ++  L++          A E+++ M
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 236/487 (48%), Gaps = 18/487 (3%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            V+   +++  +  + M   G   D      +I G C+  +   A ++   ++GSG  PD
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + +I+     GE+   +  + +   V+   +  N+I+R L  +G + QA  +L  M
Sbjct: 172 VITYNVMISGYCKAGEINNAL-SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++ +                  P+  ++ I+I    +D  +  A+ L  EM   GC  +V
Sbjct: 231 LQRD----------------CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L++G+C   RL+E+ + L +M  SG +P   T N + R +C     + A  L+  
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P V    +LI  LC+ G    A   L  M + G  P+ + Y+  + G    K+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+E    + + GC PD+V YN +++ LCK  +V +A ++ N++ +KG  P + TYN 
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G  K+G   +A+  L  M  K+   PD ITY++L+ GL   G+ D+AI  ++E E  
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  PN +TF +++ GLCK  +   A+     M  +G KP    +  LI     E     A
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573

Query: 660 FEVLKEM 666
            E+L E+
Sbjct: 574 LELLNEL 580



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 250/529 (47%), Gaps = 37/529 (6%)

Query: 114 SGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           +G F  A S F  +++    + H+  ++     + GE+++  + +E M       +    
Sbjct: 88  NGHFSSANSSF--VLEDVESNNHLRQLV-----RTGELEEGFKFLENMVYHGNVPDIIPC 140

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI GF +  +  KA ++ + +  SG   D   Y+V+I G CK  ++  AL +   M  
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 234 SGITPDFEILSKLITSCSDEGELT----LLVKEIWED--RDVNTMTLLCNSIMRILVSNG 287
             ++PD    + ++ S  D G+L     +L + +  D   DV T T+L  +  R    + 
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR----DS 253

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            + QA  LL  M       D G           +P+  ++++++N + K+G+LD A+   
Sbjct: 254 GVGQAMKLLDEM------RDRGC----------TPDVVTYNVLVNGICKEGRLDEAIKFL 297

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   GC  NV  +N ++  +C++ R  ++ +LL +M   GF P+  T N +   LCR+
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A++++ KM   G +P       L+   CK  K   A  +L  MV  G  PDIV Y
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  +  L    +V+ A+E+   + + GC P ++ YN +I GL KA +  +A  L +EM  
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           K L P   TY+ L+ G  + G +D+A+       E+    P+ +T+ +++ GLC   + D
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGVRPNAVTFNSIMLGLCKTRQTD 536

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
            AI     M  +GC P   ++  LI GL      + AL     +  KG+
Sbjct: 537 RAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 204/396 (51%), Gaps = 23/396 (5%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADV------------------GVEMLMIFKG 318
           N+ +R LV  G +++ +  L+ M+    + D+                    ++L + +G
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 319 TVS-PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           + + P+  +++++I+   K G+++ ALS+   M+      +V  YN ++  LC+S +L++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + E+L  M +    P   T   +    CR   V  A+ L+ +MR +G  P V    +L+ 
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            +CK G+  EA +FL DM   G  P+++ ++  +  +    R   A +L  D+   G  P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VV +NI+I+ LC+   +  A D+  +M   G  P+  +YN L++G+CK   +D+A+  L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            RM+ +    PD++TY T++  LC  G+ +DA+ + N++  KGC+P  IT+  +I GL K
Sbjct: 403 ERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +   A+     M+ K +KPD   + +L+     E
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 229/499 (45%), Gaps = 25/499 (5%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           +R L   G +EE     + +   G  VP+      L+   C+          L+ ++  G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHG-NVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSG 167

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
              D  T   ++  YC +G+ + ALSV + +      D   ++ +L +    G++ +A E
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +++RM   +   +  T+ +LI    + S V +A++L D+M   G   D   Y+V++ G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTM 272
           K  +L+ A++  ++M  SG  P+    + ++ S    G       LL   + +    + +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T   N ++  L   G + +A ++L+ M K                    PN+ S++ +++
Sbjct: 346 TF--NILINFLCRKGLLGRAIDILEKMPKH----------------GCQPNSLSYNPLLH 387

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K+ K+D A+     M   GC  ++  YN ++  LC   ++E++ E+L ++   G  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N++   L +      A+ L+ +MR +  +P     + L+  L + GK  EA +F 
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +  + G  P+ V +++ + GL   ++ D A++    +   GC P   +Y I+I GL   
Sbjct: 508 HEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYE 567

Query: 513 QRVAEAEDLFNEMITKGLI 531
               EA +L NE+  KGL+
Sbjct: 568 GMAKEALELLNELCNKGLM 586


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/611 (27%), Positives = 294/611 (48%), Gaps = 28/611 (4%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCK-SCSVDLVEMRLKEMQ 93
            ++CL      +EA +ML  ++   G CVP+ +SYN ++++LC  S S + ++M L+  +
Sbjct: 206 FLKCLCYAKRTDEALSMLLHRMSELG-CVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTK 264

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
             G   D  + T ++      G+  KA ++FNE++  G V   V ++ ++ A  K   +D
Sbjct: 265 GDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMD 324

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA  ++ +M D +I+ +E T+  +IHG+    R  +A ++F +MT+ G   D   ++ ++
Sbjct: 325 KAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLM 384

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
             LCK+K+ + A +++  +   G  PD    S L+   + EG    +             
Sbjct: 385 DSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDM------------- 431

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF---KGT-VSPNTSSFD 328
               N++   +  NG +  ++     +I       +  E L+IF   +G  VSPN  ++ 
Sbjct: 432 ----NNLFHSMTDNGIVADSH-CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L + G+L  A+    +M  IG   N  +Y++LI G C    L ++ EL+ EM + 
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 389 GF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           G  +P     +S+   LC    V+ A ++   +   G  P +     LI   C  GK  +
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           AF  L  MV  G  PD+V YS  I G     R+D  L LFR++      P  V Y++++ 
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLD 666

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL +A R + A+ +F+EMI  G   S++TY +++ G C++   D+A + L   L   +  
Sbjct: 667 GLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA-ITLFHKLGAMNLK 725

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            ++    T+I  L    R ++A  L+  +   G  PN  T+  +I  L K      A + 
Sbjct: 726 FEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIM 785

Query: 628 FRMMKEKGMKP 638
           F  M++ G  P
Sbjct: 786 FSSMEKTGCAP 796



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 293/605 (48%), Gaps = 41/605 (6%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP  + +  +I  L   G + +A  LF+++ ++G+ VPN  +YN ++ ALCK+ ++D  E
Sbjct: 269 SPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGV-VPNVVTYNSIVHALCKARAMDKAE 327

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
           + L++M D     D+ T T ++  Y   G++ +A  +F E+   G + + V F+ L+ + 
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K     +A E+   +     + +  ++ +L+HG+  + R      LF  MT +G  +D+
Sbjct: 388 CKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADS 447

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             ++++I    K   ++ AL +++EM+G G++P+    + +I +    G L   ++++ +
Sbjct: 448 HCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQ 507

Query: 266 --DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                +   T++ +S+++   ++G + +A  L+  M+                +G   PN
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMD---------------QGIPRPN 552

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
            + F  II++L  +G++  A  +F  +  IG   ++F +N+LIDG C   ++++++ +L 
Sbjct: 553 ITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLD 612

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M  +G +P   T +++     +   +   L L R+M  +  +P     +L++  L + G
Sbjct: 613 AMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAG 672

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A +   +M++ G    I  Y+  + GL      D A+ LF  + A     ++   N
Sbjct: 673 RTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILN 732

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I  L K +R  EA DLF  +   GL+P+ +TY ++I    K G++++A +  S M EK
Sbjct: 733 TMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSM-EK 791

Query: 564 ESGSP------DVIT-------------YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
              +P      D+I              Y + +DG  I+       +L +    KG    
Sbjct: 792 TGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYRE 851

Query: 605 RITFM 609
           +I F+
Sbjct: 852 QIKFL 856



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 249/545 (45%), Gaps = 67/545 (12%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK----KSRVDKALQ 191
           H + IL+    +    D       R+    +R   +T  ++ + F+K      R D+AL 
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARL----LRAGLRTDGIVTNTFLKCLCYAKRTDEALS 221

Query: 192 -LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITS 249
            L  +M++ G   DA  Y+ +I  LC   + + AL +   M KG G +PD    + +I  
Sbjct: 222 MLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281

Query: 250 CSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
              EGE++    L  E+ + + V    +  NSI+  L    ++D+A  +L+ M       
Sbjct: 282 LFMEGEISKACNLFNEMVQ-KGVVPNVVTYNSIVHALCKARAMDKAELVLRQM------- 333

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                    F  ++ P+  ++  +I+     G+   A  +F+EMT+ G + ++  +N+L+
Sbjct: 334 ---------FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLM 384

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFT----------------LNSMFRCL------ 404
           D LC   R +E+ E+   +   G KP   +                +N++F  +      
Sbjct: 385 DSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIV 444

Query: 405 -------------CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                         +R  +  AL +  +MR QG  P V     +I  LC+ G+  +A   
Sbjct: 445 ADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEK 504

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC-PDVVAYNIIISGLC 510
           L+ M+  G  P+ V Y + I G      +  A EL  ++   G   P++  ++ II  LC
Sbjct: 505 LSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLC 564

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
              RV  A+D+FN +I  G  P + T+N LI+G+C  G +D+A   L  M+   +  PDV
Sbjct: 565 NEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT-EPDV 623

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY+TLI+G   +GR DD ++L+ EM  K   P  +T+  ++ GL +  R  AA   F  
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 631 MKEKG 635
           M E G
Sbjct: 684 MIESG 688



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 223/494 (45%), Gaps = 28/494 (5%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           + L   T+ +L+    +  R D     F ++ ++G  +D  + +  +  LC  K+ + AL
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 226 Q-LYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCN 277
             L   M   G  PD      ++  L      +  L +L++    D    DV + T++ +
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
                L   G I +A NL   M++               KG V PN  +++ I++ L K 
Sbjct: 281 G----LFMEGEISKACNLFNEMVQ---------------KGVV-PNVVTYNSIVHALCKA 320

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +D A  + R+M       +   Y  +I G     R +E+ ++ +EM   G  P   T 
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+   LC+ +    A  +   +  +GH+P +   ++L+      G+ ++       M  
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G + D  C++  I        +D AL +F ++   G  P+VV Y  +I+ LC+  R+A+
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +  ++MI+ GL P+   Y+ LI G+C  G++ +A   +S M+++    P++  ++++I
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSII 560

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             LC  GR  +A  ++N +   G  P+  TF +LI G C   +   A      M   G +
Sbjct: 561 HSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE 620

Query: 638 PDMFVFVALISAFL 651
           PD+  +  LI+ + 
Sbjct: 621 PDVVTYSTLINGYF 634



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 144/274 (52%), Gaps = 8/274 (2%)

Query: 386 EESGFKPTHFTLNS---MFRCLCR-RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           EE+G +    T+++   +  C CR R+  +G     R +R       +  NT L K LC 
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFL-KCLCY 212

Query: 442 HGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALE-LFRDICAHGCCPDV 499
             +  EA   L   + E G +PD   Y+  I  L    R   AL+ L R     GC PDV
Sbjct: 213 AKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDV 272

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V+Y ++I GL     +++A +LFNEM+ KG++P+V TYN +++  CK+  +D+A L L +
Sbjct: 273 VSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQ 332

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M +  S  PD +TYT +I G    GR  +A  ++ EM  +G  P+ +TF +L+  LCK  
Sbjct: 333 MFDN-SIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHK 391

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           R + A   F  +  KG KPD+  +  L+  + +E
Sbjct: 392 RSKEAAEIFHSIATKGHKPDIISYSILLHGYATE 425


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 251/551 (45%), Gaps = 51/551 (9%)

Query: 117 FDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            D+ALS FN ++        V F+ LL + +K         L  +MD   I  +  T  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +I+     +RVD A     K+ K G   DA  +  +I GLC   ++  AL L+ +M G G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             P+                             V T   L N + ++    G+   A  L
Sbjct: 171 FQPN-----------------------------VVTYGTLINGLCKV----GNTSAAIRL 197

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M +G                   PN   F  +I++L KD ++  A ++F EM   G 
Sbjct: 198 LRSMEQGN----------------CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+  YN+LI GLC     +    L+ EM +S   P  FTLN++   LC+   V  A +
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +V  M  +G EP V     L+   C   +   A +    MV +  + +++ Y+  I G  
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I+ VD A+ LF ++      P+ V YN +I GLC   R+ +A  LF+EM+ +G IP + 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY  L +  CK+ ++D+AM  L + +E  +  PD+  YTT++DG+C AG  +DA  L++ 
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  KG  PN  T+  +I GLCK      A   F  M + G  P+   +  +   FL    
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540

Query: 656 PPLAFEVLKEM 666
                E+L+EM
Sbjct: 541 ALRTIELLEEM 551



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 250/529 (47%), Gaps = 33/529 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K+     +    ++M  +G   D YTL  ++   C+  + D A S 
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M     + N  T+  LI+G  K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +  ++  +I  LCK++Q+  A  ++SEM   GI+P+   
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 243 LSKLITS-CS--DEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI   C   +   +T L+ E+ + +   DV T+    N+++  L   G + +A++++
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL----NTVVDALCKEGMVAEAHDVV 303

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                           +MI +G V PN  +++ +++      ++D+A+ +F  M    C+
Sbjct: 304 D---------------MMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  YN LI+G C    ++++  L  EM      P   T N++   LC    +  A++L
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +G  P +     L   LCK+    +A   L  +    + PDI  Y+  + G+  
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              ++ A +LF ++ + G  P+V  YNI+I GLCK   +AEA  LF+EM   G  P+  T
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI-----DGL 580
           YNL+  G+ ++    + +  L  ML +   S DV T T L+     DGL
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLAR-GFSVDVSTTTLLVGMLSDDGL 575



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 179/414 (43%), Gaps = 53/414 (12%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA  +F ++  +G+  PN  +YN L+  LCK C    V   + EM D     D +TL 
Sbjct: 226 VTEAFNIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDD 163
            ++   C  G   +A  V + +I  G V+ +V  ++ L+       EVD A ++ + M  
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            +   N  ++  LI+G+ K   VDKA+ LF++M++     +   Y+ +I GLC   +L+ 
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A+ L+ EM   G  PD      L    SD                              L
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTL----SD-----------------------------YL 430

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             N  +D+A  LL+A I+G                   P+   +  I++ + + G+L+ A
Sbjct: 431 CKNRHLDKAMALLKA-IEGS---------------NWDPDIQIYTTILDGMCRAGELEDA 474

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LF  ++  G   NV+ YN +I GLC    L E+ +L  EM ++G  P   T N + R 
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             R  + +  + L+ +M  +G    V   TLL+  L   G      + L   VQ
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 140/348 (40%), Gaps = 71/348 (20%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N L+E+      M      P+    N +   + + +     L+L R+M   G  P V   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++I  LC   +   AF  L  +++ G  PD   ++  I GL    ++  AL LF  +  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 493 HGCCPDVVAYNIIISGLCKA-----------------------------------QRVAE 517
            G  P+VV Y  +I+GLCK                                    ++V E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 518 AEDLFNEMITKGLIPSVATYNLLING------W--------------------------- 544
           A ++F+EMITKG+ P++ TYN LI+G      W                           
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 545 --CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             CK G + +A   +  M+ +    P+V+TY  L+DG C+    D A+ +++ M  K C 
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            N I++  LI G CK      A+  F  M  + + P+   +  LI   
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 273/585 (46%), Gaps = 62/585 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G + +A  +FD +   G C P+  +Y+ LL+A CK          L EM+  
Sbjct: 257 LIRALCVRGRIPDALAVFDDMLHRG-CSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEV 151
           G   D  T   L+   CN G  D+AL++ + +  HG   + V ++ +L +     +W EV
Sbjct: 316 GCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEV 375

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           +   EL+  M   N   +E TF  ++    ++  VD+A+++ D M++ G  +D   Y  I
Sbjct: 376 E---ELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           + GLC   +++ A++L S +K  G  PD                                
Sbjct: 433 LDGLCDVGRVDDAVELLSRLKSYGCKPD-------------------------------- 460

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            T+   ++++ L S    ++A  L+  M+  +                  P+  +F+ ++
Sbjct: 461 -TIAYTTVLKGLCSTEQWERAEELMAEMLCSD----------------CPPDEVTFNTVV 503

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            +L + G +D A+ +  +M++ GC  ++  YN +IDGLCN + ++++ ELL +++  G K
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N++ + LC       A  L+  M      P       +I  LC+ G   +A   
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  M + G +P+   YS  +  L+   +   ALEL   +  +G  PD++ YN +IS L K
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNGT-PDLITYNTVISNLTK 681

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDV 570
           A ++ EA DL   M++ GL P   TY  L  G C+    D+A+  L R+  +++G SPD 
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV--QDTGLSPDT 739

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             Y  ++ G C   R D AI  +  M   GC P+  T++ L+  L
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/633 (24%), Positives = 287/633 (45%), Gaps = 60/633 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+ L S G V +A  +F  +      V    +YN ++   C++  ++     +  M  
Sbjct: 192 ILIKRLCSDGRVSDAERVFAALGPSATVV----TYNTMVNGYCRAGRIEDARRLINGMP- 246

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
             +  D +T  PL++  C  G+   AL+VF++++  G     V +SILL A  K     +
Sbjct: 247 --FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M       +  T+ VLI+    +  VD+AL +   +   G   DA  Y  ++ 
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LC +++ +   +L +EM  +   PD               E+T                
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPD---------------EVTF--------------- 394

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N+I+  L   G +D+A  ++  M +   +AD+                 ++  I++ 
Sbjct: 395 ---NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADI----------------VTYSSILDG 435

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   G++D A+ L   +   GC  +   Y  ++ GLC++ + E + EL+ EM  S   P 
Sbjct: 436 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++   LC++  V  A+ +V +M   G  P +     +I  LC      +A   L+
Sbjct: 496 EVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           D+   G  PDIV ++  + GL  + R + A +L  ++    C PD + +N +I+ LC+  
Sbjct: 556 DLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKG 615

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + +A +    M   G +P+ +TY+++++   K+G    A+  LS M    +G+PD+ITY
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM---TNGTPDLITY 672

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            T+I  L  AG+ ++A+ L   M   G  P+  T+ +L  G+C+ D    A+   R +++
Sbjct: 673 NTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQD 732

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G+ PD   +  ++  F  +    LA +    M
Sbjct: 733 TGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM 765



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 216/527 (40%), Gaps = 93/527 (17%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMY--DVIIGGLCKNKQLEMALQLYSEMKGS 234
           +   V++  +D+AL LFD M   G  +   +   +++I  LC + ++  A ++++ +  S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
                                             V T   + N   R     G I+ A  
Sbjct: 217 AT--------------------------------VVTYNTMVNGYCRA----GRIEDARR 240

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M                      P+T +F+ +I  L   G++  AL++F +M   G
Sbjct: 241 LINGM-------------------PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG 281

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +V  Y+ L+D  C  +   ++  LL EM   G +P   T N +   +C   DV  AL
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 341

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           N++  +   G +P     T ++K LC   +  E    L +M      PD V ++  +  L
Sbjct: 342 NILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSL 401

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE----------------- 517
                VD A+E+   +  HGC  D+V Y+ I+ GLC   RV +                 
Sbjct: 402 CQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 461

Query: 518 ------------------AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
                             AE+L  EM+     P   T+N ++   C+ G +D+A+  + +
Sbjct: 462 IAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M E    SPD++TY  +IDGLC     DDA+ L ++++  GC P+ +TF  L+ GLC  D
Sbjct: 522 MSEN-GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVD 580

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A      M      PD   F  +I++   +     A E LK M
Sbjct: 581 RWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIM 627


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 231/488 (47%), Gaps = 56/488 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           NE T+  LIHG  K  ++D+A +L D+M   G     A+++ +I GLCK  +   AL  +
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             + G+  TPD    + L+ +                                 LV +G 
Sbjct: 89  KTVAGTKCTPDIITFNILVDA---------------------------------LVKSGR 115

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +++A+ + ++M                      PN  ++  +IN L KDGKLD A+ L  
Sbjct: 116 VEEAFQIFESMHT---------------SSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M + GC  NV  Y+ L++GLC + R ++ + LL+EM   GF+P     N++   LC+ +
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  AL LV+ M   G  P V     L++  C+  +   AFR +  M + G  PD++ Y+
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYN 280

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV------AEAEDLF 522
             I GL    R+D A  L + + A  C PDV+ Y+ II GLCK  RV        A ++ 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M   G  P+  TY ++I G C++    QA+  L RM++ E   PD+ +++ +I  LC 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGSLCK 399

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           +   D A  ++  M E+ C PN + + ALI GL K      A+  F +M E   +P +  
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVAT 458

Query: 643 FVALISAF 650
           + +++   
Sbjct: 459 YNSVLDGL 466



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 275/597 (46%), Gaps = 67/597 (11%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL  L+R     G   +A  LF    RE  CVPN ++Y  L+  LCK+  +D     L E
Sbjct: 4   ALNLLVR----AGQHGQAVQLF----REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M+D G          +++  C +G+F  AL  F  +       + + F+IL+ A  K G 
Sbjct: 56  MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 151 VDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           V++A ++ E M   +  L N  T+  +I+G  K  ++D+A++L D M ++G   +   Y 
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           V++ GLCK  + +    L  EM   G  PD                              
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPD------------------------------ 205

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               ++ N+++  L  +  +D+A  L+Q MI+                    P   +++ 
Sbjct: 206 ---VIMYNTLLNGLCKSRRLDEALELVQLMIRS----------------GCYPTVVTYNS 246

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++    +  ++D A  L + M++ GC  +V  YN +I GLC   RL+++  LL++M  + 
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 390 FKPTHFTLNSMFRCLCR--RQD----VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             P   T +++   LC+  R D    +  A  ++  M+  G  P      ++I+ LC+  
Sbjct: 307 CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K+ +A   L  M+    +PD+  +S  IG L     +D A ++F  +    C P+ VAY 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GL K   V +A  +F E++ +   P VATYN +++G C  G I++A+  +  M+ K
Sbjct: 427 ALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           E   PD  +Y  LI GLC     ++A  L+  +E KG A     +  L+  LCK  R
Sbjct: 486 EC-FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKR 541



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 193/397 (48%), Gaps = 24/397 (6%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            S++  L   G +DQAY LL  M       D G+           P  +  + +I  L K
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEM------RDRGI----------PPGVAVHNGVIRGLCK 77

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHF 395
            G+   AL  F+ +    C  ++  +N L+D L  S R+EE++++   M  S    P   
Sbjct: 78  AGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  ++   LC+   +  A+ L+  M   G  P V   ++L++ LCK G+  + F  L +M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            + GF PD++ Y+  + GL   +R+D ALEL + +   GC P VV YN ++   C++++V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  L   M  +G  P V  YN +I G C+   +D A   L +M+      PDVITY+T
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC-VPDVITYST 316

Query: 576 LIDGLCIAGRPDD------AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           +IDGLC   R D       A  +   M++ GC PN  T+  +I GLC+  + + AL   R
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M +  + PD+  F  +I +     +   A+++   M
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMM 413



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 5/321 (1%)

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +N L++ G+   A+ LFRE     C+ N F Y +LI GLC + +L+++YELL EM + G 
Sbjct: 5   LNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N + R LC+      AL   + +      P +    +L+  L K G+  EAF+
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 451 FLTDM-VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
               M      LP++V Y+  I GL    ++D A+EL   +   GCCP+V+ Y++++ GL
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CKA R  +   L  EM  +G  P V  YN L+NG CKS  +D+A L L +++ +    P 
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA-LELVQLMIRSGCYPT 240

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+TY +L++  C + + D A  L   M E+GC P+ I +  +I GLC+  R   A    +
Sbjct: 241 VVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLK 300

Query: 630 MMKEKGMKPDMFVFVALISAF 650
            M      PD+  +  +I   
Sbjct: 301 QMVAARCVPDVITYSTIIDGL 321



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 231/538 (42%), Gaps = 69/538 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A R        + V  ++C         L+  L   G VEEA  +F+ +     C+P
Sbjct: 75  LCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP 134

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  ++  LCK   +D     L  M + G   +  T + L++  C +G+ DK  ++ 
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G+  D  +++ LL    K   +D+A EL++ M          T+  L+  F + 
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +VD+A +L   M++ G   D   Y+ +I GLC++ +L+ A  L  +M  +   PD    
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 244 SKLITS-CSD-----------EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           S +I   C D             E+  ++K+     +  T  ++   + R   S     Q
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ----Q 370

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL+ MI  E                V P+ SSF ++I +L K   LD A  +F  M+
Sbjct: 371 ALALLRRMIDSE----------------VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +  C  N   Y  LIDGL     ++++  +   M ES F+P   T NS            
Sbjct: 415 ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS------------ 461

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
                                  ++  LC  G+  EA R +  M+ +   PD   Y A I
Sbjct: 462 -----------------------VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            GL  +  V+ A ELF+ + A G   +V  YN++++ LCK +R+++A  + N++I  G
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 143/276 (51%), Gaps = 2/276 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  FT  S+   LC+   +  A  L+ +MR +G  P V  +  +I+ LCK G+  +A  +
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLC 510
              +      PDI+ ++  +  L+   RV+ A ++F  +  +  C P+VV Y  +I+GLC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  ++  A +L + M   G  P+V TY++L+ G CK+G  D+    L  M  +    PDV
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDV 206

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           I Y TL++GLC + R D+A+ L   M   GC P  +T+ +L+   C+  +   A    ++
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E+G  PD+  +  +I+    +     A  +LK+M
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 6/226 (2%)

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +HG+A++ FR      +E  +P+   Y + I GL    ++D A EL  ++   G  P V 
Sbjct: 13  QHGQAVQLFR------EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +N +I GLCKA R  +A   F  +      P + T+N+L++   KSG +++A      M
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                  P+V+TYTT+I+GLC  G+ D AI L + M E GC PN IT+  L+ GLCK  R
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                   + M  +G +PD+ ++  L++          A E+++ M
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 164/624 (26%), Positives = 293/624 (46%), Gaps = 32/624 (5%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
            RC  S       I+      + ++A  LF  +     C P   S+N +L A  +S    
Sbjct: 72  QRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWR 131

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILL 142
             E+     Q  G   +  T   L+++ C   QF+K   +   + ++G   D   +  L+
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGF 201
            A +K G +  A EL + M    +  +   + +LI GF++K    KA +++ ++ T+S  
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
                 Y+++I GLCK  +L+ ++++++ MK +  +PD    S +I   S  G      K
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311

Query: 262 EIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-- 313
              E        DV T     N+++  L   G +++ + L   M K      V   ML  
Sbjct: 312 VFQEMIESGLSPDVRTY----NAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQ 367

Query: 314 ----------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                           ++ +  +  +++++ ++IN L K+G L+ AL +  E    G   
Sbjct: 368 GLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL 427

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + F Y++++ GLC    LE++ EL+ +M+++  K      NS+     R   +  A++++
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           R+M+ +   P V     +I  LCK  +  +A+  L +M++EG  PD++ YS  I GL   
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           ++VD+AL L+         PD+  +NIII GLC AQ+V  A ++F +M     +P + T+
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N ++ G  K+G+  +A+    R+LE     PD+I+Y     GLC   R  DAI    +  
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEA-GLQPDIISYNITFKGLCSCARVSDAIEFLYDAL 666

Query: 598 EKGCAPNRITFMALITGLCKCDRP 621
           ++G  PN  T+  L+  +   D+P
Sbjct: 667 DRGILPNAPTWNVLVRAVVD-DKP 689



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 249/543 (45%), Gaps = 33/543 (6%)

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++ Y      D+AL++F  ++D    +  +  F+ +L AF +  +  +A           
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N +T+ +LI    KK + +K   L   M ++G   D   Y  +I  L K+  L  A+
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--------RDVNTMTLLCN 277
           +L+ EM   G+ PD    + LI     +G+  +   EIW+           V T  ++ N
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDF-VKANEIWKRLLTESSVYPSVETYNIMIN 263

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            + ++    G +D++  +   M K E                 SP+  +F  +I+ L K 
Sbjct: 264 GLCKL----GKLDESMEMWNRMKKNEK----------------SPDLFTFSSMIHGLSKA 303

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G  + A  +F+EM + G   +V  YN ++ GL  + +L + +EL   M ++       + 
Sbjct: 304 GNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNI-VSY 362

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N + + L   + V  A+   + +  +G +       LLI  LCK+G   +A R L +   
Sbjct: 363 NMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAEN 422

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           EG   D   YS+ + GL     ++ A+EL   +  +    +   +N +I+G  +A ++ E
Sbjct: 423 EGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEE 482

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  +  EM +K   P+V +YN +ING CK+     A L L  MLE E   PD+ITY+ LI
Sbjct: 483 AISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE-EGLKPDMITYSLLI 541

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DGLC   + D A+ LW++   K   P+      +I GLC   +   AL  F  M++    
Sbjct: 542 DGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCV 601

Query: 638 PDM 640
           PD+
Sbjct: 602 PDL 604



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 251/529 (47%), Gaps = 26/529 (4%)

Query: 144 AFSKWGEVDKACELIERMDD---CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           A++K    D+A  L + M D   CN  +  ++F  +++ F++ ++  +A   F     +G
Sbjct: 87  AYAKCSMPDQALNLFQNMVDIFGCNPGI--RSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
            + +   Y+++I   CK +Q E    L + M  +G+ PD      LI + +  G L L  
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNL-LDA 203

Query: 261 KEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            E++++   R VN   +  N ++   +  G   +A  + + ++                +
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLT---------------E 248

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
            +V P+  +++I+IN L K GKLD ++ ++  M +     ++F ++++I GL  +     
Sbjct: 249 SSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNA 308

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + ++ +EM ESG  P   T N+M   L R   +     L   M        V +N +LI+
Sbjct: 309 AEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYN-MLIQ 367

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            L  + K  +A  +   + + G   D   Y   I GL     ++ AL +  +    G   
Sbjct: 368 GLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL 427

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D  AY+ ++ GLCK   + +A +L ++M       +   +N LING+ ++  +++A+  L
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M  K+  +P V++Y T+I+GLC A R  DA +   EM E+G  P+ IT+  LI GLC+
Sbjct: 488 REMKSKDC-APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCR 546

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++   AL  +     K +KPD+ +   +I    +     +A E+  +M
Sbjct: 547 GEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/477 (21%), Positives = 189/477 (39%), Gaps = 91/477 (19%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           LS+A        + Q++++S   +SP    +  ++  L   G + +   L++ + +   C
Sbjct: 300 LSKAGNFNAAEKVFQEMIESG--LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC 357

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
             N  SYN L++ L  +  V+      + + + G   D  T   L+   C +G  +KAL 
Sbjct: 358 --NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALR 415

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  E  + G  +D   +S ++    K G +++A ELI +M     +LN   F  LI+G+V
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++++A+ +  +M     A     Y+ II GLCK ++   A     EM   G+ PD  
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI                                   L     +D A NL    I 
Sbjct: 536 TYSLLIDG---------------------------------LCRGEKVDMALNLWHQCIN 562

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + P+    +III+ L    K+D+AL +F +M Q+ C+ ++  
Sbjct: 563 KR----------------LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVT 606

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N +++GL  +    E+ ++   + E+G +P   + N  F                    
Sbjct: 607 HNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITF-------------------- 646

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
                          K LC   +  +A  FL D +  G LP+   ++  +  ++D K
Sbjct: 647 ---------------KGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/578 (28%), Positives = 270/578 (46%), Gaps = 53/578 (9%)

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILL 142
           LV +RL  M D G      TL+ +L       QF  AL +F+EI+  G   D +V++ ++
Sbjct: 165 LVVVRL--MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            +  +  +  +A E+I RM+     L+  T+ V I G  K  RV +A+++ + ++  G  
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           +D   Y  ++ GLCK ++ E   ++ +EM   G  P    +S L+               
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG------------- 329

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                               L   G+I  A++L+                  + K  V+P
Sbjct: 330 --------------------LRKKGNIGSAFDLVNK----------------VKKFGVAP 353

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +   ++ +IN++ KDGKLD A SLF  M   G   N   Y+ LID  C   +L+ +   L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M E G K T +  +S+    C+   +  A +L  +M   G +P V   T LI   CK 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+   AFR   +M  +G  P+   ++A I GL    R+  A +LF ++      P+ V Y
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N++I G CK      A +L +EM+ KGL+P   TY  LI+G C +G + +A   ++  L+
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND-LQ 592

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            E    + + ++ L+ G C  GR DDA+    EM  +G A + + +  LI G+ +    R
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           + +   + M ++G++PD  ++  +I A     N  +AF
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAF 690



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 241/513 (46%), Gaps = 21/513 (4%)

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           ++  M DC I    +T   +++G ++  +   AL LFD++  SG   D  +Y  ++  LC
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLL 275
           + K    A ++   M+ SG        +  I   C ++         +WE  ++    LL
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ--------RVWEAVEIKN--LL 276

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINT 333
               +R       +     L+  + K E   + G EM+  MI  G V P+ ++   +++ 
Sbjct: 277 SYKGLR-----ADVGTYCTLVLGLCKVEEF-EAGEEMMNEMIEFGFV-PSEAAVSNLVDG 329

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G +  A  L  ++ + G   ++F+YN LI+ +C   +L+E+  L   M   G  P 
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T + +    C+R  +  AL+ + KM   G +  V   + LI   CK GK   A     
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+  G  P++V Y++ I G      +  A  L+ ++   G  P+   +  +ISGLC A 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+AEA  LF EM+   +IP+  TYN+LI G CK GN  +A   L  M+EK    PD  TY
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK-GLVPDTYTY 568

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             LI GLC  GR  +A    N+++ +    N + F AL+ G CK  R   AL   R M  
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLG 628

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G+  D+  +  LI   L + +     ++LK+M
Sbjct: 629 RGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQM 661



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 266/591 (45%), Gaps = 54/591 (9%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  + + L++ L K  ++      + +++ +G     +    L+   C  G+ D+A S
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +FN +   G + ++  +SIL+ +F K G++D A   + +M +  I+     +  LI G  
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  ++  A  LFD+M  +G   +  +Y  +I G CK  +L  A +LY EM G GI+P+  
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI+       +    K   E  + N +   +  N ++      G+  +A+ LL  M
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++               KG V P+T ++  +I+ L   G++  A     ++       N 
Sbjct: 557 VE---------------KGLV-PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             ++ L+ G C   RL+++ +  REM   G        + +   + R+QD    ++L+++
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  QG  P     T +I    K G    AF     MV EG LP++V Y+A I GL  I  
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGL 720

Query: 480 VDLALELFRDICAHGCCPD----------------------------------VVAYNII 505
           +D A  L R++ A    P+                                   V YNI+
Sbjct: 721 MDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNIL 780

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I G CK  R+ EA ++   MI  G+ P   +Y+ +I  +C+ G++ +A+     ML +  
Sbjct: 781 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR-G 839

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +PD + Y  LI G C+ G    A  L ++M  +G  PNR T+ +LI G C
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 271/628 (43%), Gaps = 53/628 (8%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           S C +S       IR L     V EA  + + +  +GL   +  +Y  L+  LCK    +
Sbjct: 244 SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGL-RADVGTYCTLVLGLCKVEEFE 302

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILL 142
             E  + EM ++G+   +  ++ L+      G    A  + N++   G      V++ L+
Sbjct: 303 AGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            +  K G++D+A  L   M    +  N+ T+ +LI  F K+ ++D AL    KMT+ G  
Sbjct: 363 NSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           +    Y  +I G CK  +L  A  L+ EM  +G+ P+  I + LI+    E         
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE--------- 473

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                                   G +  A+ L   M                 KG +SP
Sbjct: 474 ------------------------GELHNAFRLYHEMTG---------------KG-ISP 493

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           NT +F  +I+ L    ++  A  LF EM +   + N   YN LI+G C       ++ELL
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL 553

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM E G  P  +T   +   LC    V  A   +  ++ +  +      + L+   CK 
Sbjct: 554 DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE 613

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  +A     +M+  G   D+VCYS  I G++  +     ++L + +   G  PD V Y
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLY 673

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I    KA  +  A  L++ M+++G +P+V TY  LING CK G +D+A L    ML 
Sbjct: 674 TTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 733

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             S  P+  TY   +D L   G  + AI L + + E G   N +T+  LI G CK  R +
Sbjct: 734 SNS-LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQ 791

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAF 650
            A      M + G+ PD   +  +I  +
Sbjct: 792 EAAEVLVNMIDSGISPDCISYSTIIYEY 819



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 243/535 (45%), Gaps = 30/535 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  +   G ++EA  LF+ +  +GL  PN+ +Y+ L+++ CK   +D+    L +M + 
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGL-FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G     Y  + L+  +C  G+   A S+F+E+I +G     V ++ L+  + K GE+  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   M    I  N  TF  LI G    +R+ +A +LF +M +     +   Y+V+I G
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDV 269
            CK      A +L  EM   G+ PD      LI+     G ++   +E   D     + +
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE-AREFMNDLQGEQQKL 598

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF------------- 316
           N M    ++++      G +D A +  + M+      D+    ++I+             
Sbjct: 599 NEMCF--SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIID 656

Query: 317 ------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                    + P+   +  +I+   K G L +A  L+  M   GC+ NV  Y  LI+GLC
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               ++++  L REM  S   P   T       L    ++  A+ L   + ++G      
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTV 775

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +LI+  CK G+  EA   L +M+  G  PD + YS  I        +  A++L+  +
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
              G  PD VAYN +I G C    + +A +L ++M+ +G+ P+ ATYN LI+G C
Sbjct: 836 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 1/343 (0%)

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T  FD++I T +++ +    L + R M   G +  +   + +++GL    +   +  L  
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           E+  SG +P  +   ++ R LC  +D + A  ++ +M   G +  V    + I+ LCK+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  EA      +  +G   D+  Y   + GL  ++  +   E+  ++   G  P   A +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ GL K   +  A DL N++   G+ PS+  YN LIN  CK G +D+A    + M  K
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               P+ +TY+ LID  C  G+ D A+    +M E G       + +LI+G CK  + RA
Sbjct: 385 -GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F  M   G+KP++ ++ +LIS +  E     AF +  EM
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 251/551 (45%), Gaps = 51/551 (9%)

Query: 117 FDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            D+ALS FN ++        V F+ LL + +K         L  +MD   I  +  T  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +I+     +RVD A     K+ K G   DA  +  +I GLC   ++  AL L+ +M G G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             P+                             V T   L N + ++    G+   A  L
Sbjct: 171 FQPN-----------------------------VVTYGTLINGLCKV----GNTSAAIRL 197

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M                 +G   PN   F  +I++L KD ++  A ++F EM   G 
Sbjct: 198 LRSM----------------EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+  YN+LI GLC     +    L+ EM +S   P  FTLN++   LC+   V  A +
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +V  M  +G EP V     L+   C   +   A +    MV +  + +++ Y+  I G  
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I+ VD A+ LF ++      P+ V YN +I GLC   R+ +A  LF+EM+ +G IP + 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY  L +  CK+ ++D+AM  L + +E  +  PD+  YTT++DG+C AG  +DA  L++ 
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  KG  PN  T+  +I GLCK      A   F  M + G  P+   +  +   FL    
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540

Query: 656 PPLAFEVLKEM 666
                E+L+EM
Sbjct: 541 ALRTIELLEEM 551



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 249/528 (47%), Gaps = 28/528 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K+     +    ++M  +G   D YTL  ++   C+  + D A S 
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M     + N  T+  LI+G  K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +  ++  +I  LCK++Q+  A  ++SEM   GI+P+   
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 243 LSKLITS-CS--DEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI   C   +   +T L+ E+ + +   DV T+    N+++  L   G + +A++++
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL----NTVVDALCKEGMVAEAHDVV 303

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                           +MI +G V PN  +++ +++      ++D+A+ +F  M    C+
Sbjct: 304 D---------------MMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  YN LI+G C    ++++  L  EM      P   T N++   LC    +  A++L
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +G  P +     L   LCK+    +A   L  +    + PDI  Y+  + G+  
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              ++ A +LF ++ + G  P+V  YNI+I GLCK   +AEA  LF+EM   G  P+  T
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           YNL+  G+ ++    + +  L  ML +   S DV T T L+  L   G
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLAR-GFSVDVSTTTLLVGMLSDDG 574



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA  +F ++  +G+  PN  +YN L+  LCK C    V   + EM D     D +TL 
Sbjct: 226 VTEAFNIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDD 163
            ++   C  G   +A  V + +I  G V+ +V  ++ L+       EVD A ++ + M  
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            +   N  ++  LI+G+ K   VDKA+ LF++M++     +   Y+ +I GLC   +L+ 
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A+ L+ EM   G  PD      L    SD                              L
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTL----SD-----------------------------YL 430

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             N  +D+A  LL+A I+G                   P+   +  I++ + + G+L+ A
Sbjct: 431 CKNRHLDKAMALLKA-IEG---------------SNWDPDIQIYTTILDGMCRAGELEDA 474

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LF  ++  G   NV+ YN +I GLC    L E+ +L  EM ++G  P   T N + R 
Sbjct: 475 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 534

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             R  + +  + L+ +M  +G    V   TLL+  L   G
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 140/348 (40%), Gaps = 71/348 (20%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N L+E+      M      P+    N +   + + +     L+L R+M   G  P V   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++I  LC   +   AF  L  +++ G  PD   ++  I GL    ++  AL LF  +  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 493 HGCCPDVVAYNIIISGLCKA-----------------------------------QRVAE 517
            G  P+VV Y  +I+GLCK                                    ++V E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 518 AEDLFNEMITKGLIPSVATYNLLING------W--------------------------- 544
           A ++F+EMITKG+ P++ TYN LI+G      W                           
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 545 --CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             CK G + +A   +  M+ +    P+V+TY  L+DG C+    D A+ +++ M  K C 
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            N I++  LI G CK      A+  F  M  + + P+   +  LI   
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 233/472 (49%), Gaps = 23/472 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V  A+  F+ M           +  I+G L K K    A+ L  +M+  GI PD   LS 
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 246 LITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G++    ++L K +      NT+ L   ++M+ L   G + ++ +       
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIIL--TTLMKGLCLKGEVKKSLHF------ 224

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + +   G +M          N  S+  ++N L K G+   A+ L R +       +V +
Sbjct: 225 HDKVVAQGFQM----------NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVM 274

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +IDGLC    + E+Y+   EM   G  P   T +++    C    ++GA +L+ +M 
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P V   T+LI  LCK GK  EA   L  M +EG  P++V YS  + G   +  V 
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH 394

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A ++F  +      P V +YNI+I+GLCK + V EA +L  EM+ K ++P+  TYN LI
Sbjct: 395 NAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI 454

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G CKSG I  A L L + L       DVITYT+L+DGLC     D AI L+ +M+E+G 
Sbjct: 455 DGLCKSGRITSA-LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            PN+ T+ ALI GLCK  R + A   F+ +  KG   D++ +  +I     E
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 231/512 (45%), Gaps = 51/512 (9%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
           K+M+  G   D  TL+ L+  +C+ GQ   + SV  +I+  G+  +  + + L+      
Sbjct: 156 KQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLK 215

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GEV K+    +++     ++N+ ++  L++G  K      A++L   +       D  MY
Sbjct: 216 GEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMY 275

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + II GLCK+K +  A   Y+EM   GI PD    S LI      G+L            
Sbjct: 276 NTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLM----------- 324

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                  A++LL  M                    ++P+  ++ 
Sbjct: 325 ----------------------GAFSLLNEMTLKN----------------INPDVYTYT 346

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K+GKL  A +L   MT+ G   NV  Y+ L+DG C    +  + ++   M ++
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P+  + N M   LC+ + V  A+NL+R+M  +   P       LI  LCK G+   A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              + ++   G   D++ Y++ + GL   + +D A+ LF  +   G  P+   Y  +I G
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  R+  A+ LF  ++ KG    V TYN++I G CK G +D+A+   S+M E     P
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKM-EDNGCIP 585

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           D +T+  +I  L      D A  L +EM  KG
Sbjct: 586 DAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 189/389 (48%), Gaps = 5/389 (1%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGE--PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           M ++ +  SI +   +L +++K +  P A + +   M  KG + P+  +  I+IN     
Sbjct: 123 MLLMRNTPSIIEFGKILGSLVKMKHFPTA-ISLSKQMEVKG-IEPDLVTLSILINCFCHL 180

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++  + S+  ++ ++G   N  +   L+ GLC    +++S     ++   GF+    + 
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++   LC+  +   A+ L+R +  +   P V     +I  LCK     EA+ F T+M  
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  PD++ YS  I G     ++  A  L  ++      PDV  Y I+I  LCK  ++ E
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A++L   M  +G+ P+V TY+ L++G+C  G +  A      M++ E  +P V +Y  +I
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV-NPSVCSYNIMI 419

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +GLC     D+A+ L  EM  K   PN +T+ +LI GLCK  R  +AL   + +  +G  
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQP 479

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
            D+  + +L+       N   A  +  +M
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKM 508



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 150/358 (41%), Gaps = 28/358 (7%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           KG V PN  +  I+IN L   G++  + S+  ++ ++G   N      L+ G        
Sbjct: 5   KGIV-PNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETR 58

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRR--------------------QDVVG-ALN 415
            + +L R +E+   +P  +  +S+   +                        DVV  A++
Sbjct: 59  CAIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVS 118

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
               M +  + P +     ++  L K      A      M  +G  PD+V  S  I    
Sbjct: 119 QFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            + ++  +  +   I   G  P+ +    ++ GLC    V ++    ++++ +G   +  
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +Y  L+NG CK G    A+  L RM+E  S  PDV+ Y T+IDGLC     ++A   + E
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLL-RMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTE 297

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           M  +G  P+ IT+  LI G C   +   A      M  K + PD++ +  LI A   E
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 39/200 (19%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E  N+L + + +    VPN  +YN L++ LCKS  +      +KE+   G   D  T T 
Sbjct: 430 EAMNLLREMLHKN--VVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           LL   C +   DKA+++F ++ + G                                  I
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERG----------------------------------I 513

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           + N+ T+  LI G  K +R+  A +LF  +   G   D   Y+V+IGGLCK   L+ AL 
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA 573

Query: 227 LYSEMKGSGITPD---FEIL 243
           + S+M+ +G  PD   FEI+
Sbjct: 574 MKSKMEDNGCIPDAVTFEII 593


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 282/680 (41%), Gaps = 94/680 (13%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN LL  + +  + D ++  L EM   G+G    T   ++     + +  +   V   +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +      ++ L+ AFS     D    L ++M +         F  LI GF K+ RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D AL L D+M  S   +D  +Y+V I    K  +++MA + + E++ +G+ PD    + +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I        L   V E++E  + N     T   N+++    S G  D+AY+LL+      
Sbjct: 280 IGVLCKANRLDEAV-EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 304 PIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            I  V                 E L +F   K   +PN S+++I+I+ L + GKLD A  
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M + G   NV   N ++D LC S +L+E+  +  EM+     P   T  S+   L 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG------ 459
           +   V  A  +  KM            T LIK    HG+  +  +   DM+ +       
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 460 -----------------------------FLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                                        F+PD   YS  I GLI     +   ELF  +
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC  D  AYNI+I G CK  +V +A  L  EM TKG  P+V TY  +I+G  K   +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG---------- 600
           D+A +       K     +V+ Y++LIDG    GR D+A ++  E+ +KG          
Sbjct: 639 DEAYMLFEEAKSKRI-ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697

Query: 601 -------------------------CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
                                    C PN++T+  LI GLCK  +   A V ++ M+++G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757

Query: 636 MKPDMFVFVALISAFLSELN 655
           MKP    +  +IS      N
Sbjct: 758 MKPSTISYTTMISGLAKAGN 777



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 164/623 (26%), Positives = 294/623 (47%), Gaps = 29/623 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I   G VG V+ A   F +++  GL  P+  +Y  ++  LCK+  +D      + ++   
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
                Y    ++  Y ++G+FD+A S+       G +   + ++ +L    K G+VD+A 
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           ++ E M   +   N  T+ +LI    +  ++D A +L D M K+G   +    ++++  L
Sbjct: 364 KVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMT 273
           CK+++L+ A  ++ EM     TPD      LI      G +     V E   D D  T +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GEPIADVGVEML 313
           ++  S+++   ++G  +  + + + MI                     GEP  + G  M 
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP--EKGRAMF 540

Query: 314 MIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
              K     P+  S+ I+I+ L+K G  +    LF  M + GC+ +   YN +IDG C  
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            ++ ++Y+LL EM+  GF+PT  T  S+   L +   +  A  L  + + +  E  V   
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + LI    K G+  EA+  L +++Q+G  P++  +++ +  L+  + ++ AL  F+ +  
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             C P+ V Y I+I+GLCK ++  +A   + EM  +G+ PS  +Y  +I+G  K+GNI +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A     R  +   G PD   Y  +I+GL    R  DA  L+ E   +G   +  T + L+
Sbjct: 781 AGALFDR-FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839

Query: 613 TGLCKCDRPRAALVHFRMMKEKG 635
             L K D    A +   +++E G
Sbjct: 840 DTLHKNDCLEQAAIVGAVLRETG 862



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 1/271 (0%)

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + NS+   + R ++      ++ +M V G  P V     ++    K  K  E +  +  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +  F P    Y+  IG    +   D+ L LF+ +   G  P V  +  +I G  K  RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  L +EM +  L   +  YN+ I+ + K G +D A       +E     PD +TYT+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTS 278

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +I  LC A R D+A+ ++  +E+    P    +  +I G     +   A       + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             P +  +  +++          A +V +EM
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 2/232 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++  R+    +L ++    R  ++      LI   G VG ++EA ++ +++ ++GL  P
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TP 690

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N Y++N LL+AL K+  ++   +  + M++     ++ T   L+   C   +F+KA   +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G     + ++ ++   +K G + +A  L +R        +   +  +I G    
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +R   A  LF++  + G         V++  L KN  LE A  + + ++ +G
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 282/611 (46%), Gaps = 28/611 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A   F+++ R     P    ++ LL A+ +            ++Q  G      T T
Sbjct: 36  VDDAVTCFNRMVRV-FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  Y +      A S+   I+  G+    V F+ ++  F   G + KA +  + +   
Sbjct: 95  ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               ++ T+  LI+G  K  ++  AL L  +M KS    +  MY  +I GLCK+  +  A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEG---ELT-LLVKEIWEDRDVNTMTLLCNSIM 280
           L L S++   GI  D    + LI  C   G   E+T LL K + E+ D +  T   N ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF--NILI 272

Query: 281 RILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
             L   G I +A  +L  M K GE                  P+  +++ ++        
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGE-----------------KPDIVTYNALMEGYCSREN 315

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A  LF  M + G   +V  YN LIDG C +  ++E+  L +E+      PT  + NS
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC    +     L+ +M      P V    +LI  LCK G+ +EA   L  M+++G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P+IV Y+A + G      V++A ++F  +   G  PD++ YN++I+G CK + V EA 
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF EM  K LIP +A+YN LI+G C  G I      L  M +    SPDVITY  L+D 
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD-SGQSPDVITYNILLDA 554

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C     D AI L+ ++ E G  P+  T  A++  LCK ++ + A    + +   G  P+
Sbjct: 555 FCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN 613

Query: 640 MFVFVALISAF 650
           +  +  LI+A 
Sbjct: 614 VQTYTILINAL 624



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 245/556 (44%), Gaps = 51/556 (9%)

Query: 112 CNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C     D A++ FN ++         VF  LL A  + G    A  L  ++    I  + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            TF +LI+ +  +S    A  L   + KSG+  +   ++ II G C N  +  AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   G   D      LI   S                                  NG I 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLS---------------------------------KNGQIK 177

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A +LLQ M                 K +V PN   +  +I+ L KDG +  AL L  ++
Sbjct: 178 AALHLLQEM----------------EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G + +   YN+LIDG C+  R +E  +LL +M      P  +T N +   LC+   +
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + A  ++  M  +G +P +     L++  C      EA      MV+ G  PD++ Y+  
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G    K VD A+ LF+++C     P + +YN +I GLC + R++  + L +EM     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P V TYN+LI+  CK G I +A+  L  M+ K+   P+++TY  ++DG C+    + A 
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMM-KKGVKPNIVTYNAMMDGYCLRNNVNVAK 460

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++N M + G  P+ + +  LI G CK +    A+V F+ M+ K + PD+  + +LI   
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520

Query: 651 LSELNPPLAFEVLKEM 666
            +    P   E+L EM
Sbjct: 521 CNLGRIPHVQELLDEM 536



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/630 (25%), Positives = 281/630 (44%), Gaps = 63/630 (10%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R F  P    F  L+  +  +G    A  LF Q++ +G+  P+  ++  L+         
Sbjct: 48  RVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS-PSIATFTILINCYFHQSHT 106

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
                 L  +   G+  +  T   ++  +C +G   KAL     ++  G++ D+  +  L
Sbjct: 107 AFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTL 166

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +   SK G++  A  L++ M+  +++ N   +  LI G  K   V  AL L  ++ + G 
Sbjct: 167 INGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGI 226

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---- 257
             DA  Y+ +I G C   + +   QL ++M    + PD    + LI +   EG +     
Sbjct: 227 LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQG 286

Query: 258 --LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              ++ +  E  D+ T     N++M    S  ++ +A  L   M+K       G+E    
Sbjct: 287 VLAMMSKRGEKPDIVTY----NALMEGYCSRENVHEARELFNRMVKR------GLE---- 332

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  +++++I+   K   +D A+ LF+E+     +  +  YN+LIDGLCNS R+
Sbjct: 333 ------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
               +LL EM  S   P   T N +   LC+   ++ AL ++  M  +G +P +     +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   C       A      MV+ G  PDI+ Y+  I G    + VD A+ LF+++     
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD+ +YN +I GLC   R+   ++L +EM   G  P V TYN+L++ +CK+   D+A+ 
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 556 CLSRMLEK---------------------------------ESGSPDVITYTTLIDGLCI 582
              +++E                                     SP+V TYT LI+ LC 
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            G   +A++L ++ME+    P+ ITF  +I
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIII 656



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 239/524 (45%), Gaps = 32/524 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L   G ++ A  L  ++++  +  PN   Y+ L++ LCK   V        ++ 
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVD 152
           + G   D  T   L+   C+ G++ +   +  +++      D++ F+IL+ A  K G + 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  ++  M     + +  T+  L+ G+  +  V +A +LF++M K G   D   Y+V+I
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------D 266
            G CK K ++ A+ L+ E+    + P     + LI    + G ++ + K + E       
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM----------- 314
            DV T  +L ++    L   G I +A  +L  M+K G     V    +M           
Sbjct: 403 PDVVTYNILIDA----LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 315 -------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                  + K  + P+  +++++IN   K   +D A+ LF+EM     + ++  YN+LID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLCN  R+    ELL EM +SG  P   T N +    C+ Q    A++L R++ V+G  P
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWP 577

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
               N  ++  LCK  K   A   L  ++  G  P++  Y+  I  L        A+ L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             +  +   PD + + III  L +     +AE L  EMI +GL+
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 38/213 (17%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L +  LI       +V+EA +LF +++ + L +P+  SYN L++ LC    +  V
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL-IPDIASYNSLIDGLCNLGRIPHV 529

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD----------- 134
           +  L EM D G   D  T   LL  +C +  FDKA+S+F +I++  W D           
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589

Query: 135 -------------EHV-----------FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
                        +H+           ++IL+ A  K G   +A  L+ +M+D +   + 
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            TF ++I   ++++  DKA +L ++M   G  +
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 231/498 (46%), Gaps = 51/498 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  T   L+  FV      +A ++F     + F  D   Y  +I G CK +Q+  A+ L 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EMK +GITP       LI                                 R L     
Sbjct: 76  GEMKAAGITPTIVTFGSLI---------------------------------RKLCELNF 102

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            D+A  +   MI  +                V P+   + ++I  L K  KLDLA S F 
Sbjct: 103 TDKALQIFHQMIDMK----------------VKPDAFLYTVVIGHLCKINKLDLAASYFE 146

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M Q GC+ +   Y  L+  L  + + E+ +++  EM   G  P   T  ++    C+  
Sbjct: 147 RMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAG 206

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  AL+L+R+++  G  P     + LI  LCKH +  EA R L +M   G + D++ Y+
Sbjct: 207 RIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEA-RELFEMAA-GDVQDVIVYT 264

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I GL    ++D A  +   +   GC PD V+YN+II  LCK  RV+EA++L ++ + +
Sbjct: 265 SFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER 324

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
             +P V    +L++G CKS  +++A + L RMLE    +P V+TY+ +IDGLC A R DD
Sbjct: 325 KCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDD 384

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A ++  +M   GC P+ +T+ A+I   CK  R   A   F+ M E+G   D+  +  LI 
Sbjct: 385 AYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIR 444

Query: 649 AFLSELNPPLAFEVLKEM 666
            +        A  +++EM
Sbjct: 445 GYCRAAKVDEAIAMIEEM 462



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 157/511 (30%), Positives = 253/511 (49%), Gaps = 35/511 (6%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
           G+ ++ YT   LL+V+ N G   +A  VF +E++     D+  +  L+  F K  ++ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M    I     TF  LI    + +  DKALQ+F +M       DA +Y V+IG 
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD---FEIL-SKLITSCSDEGELTLLVKEIWEDRDVN 270
           LCK  +L++A   +  M  SG  PD   + +L   L  +C  E    +  + + +     
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDI 329
            +T    +++      G IDQA +L++ +                 KGT  SP+ S +  
Sbjct: 192 LVTY--ATVVNGYCKAGRIDQALSLMRRL-----------------KGTGRSPSGSLYST 232

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ L K  + D A  LF EM   G +Q+V +Y + I GLC + +L+E+  +  +M E+G
Sbjct: 233 LIDGLCKHDRHDEARELF-EMAA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   + N +   LC+   V  A  L+ +   +   P V   T+L+  LCK  +  EA 
Sbjct: 291 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 350

Query: 450 RFLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             L  M++ G   P +V YSA I GL    R+D A  + + +   GC PDVV Y  II  
Sbjct: 351 VILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA 410

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-- 566
            CK  R+ EA +LF  M  +G    V  YN+LI G+C++  +D+A+     M+E+ +G  
Sbjct: 411 FCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIA----MIEEMAGRG 466

Query: 567 -SPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
             P+V++ +T++DGLC   R ++A +L  +M
Sbjct: 467 IQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 218/464 (46%), Gaps = 18/464 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P++++Y  L+   CK+  +      L EM+  G      T   L++  C     DKAL +
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+++ID     D  ++++++    K  ++D A    ERM       ++ T+ VL+H   K
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             + ++  Q+F++M   G + +   Y  ++ G CK  +++ AL L   +KG+G +P   +
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI           L K    D       +    +  ++V         + +  + K 
Sbjct: 230 YSTLIDG---------LCKHDRHDEARELFEMAAGDVQDVIVYT-------SFISGLCKA 273

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + +     + + +   +P+  S+++II +L KD ++  A  L  +  +  CM  V + 
Sbjct: 274 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 333

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFK-PTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
             L+DGLC S R+EE+  +L  M E+G + P+  T +++   LC+   +  A  +++KMR
Sbjct: 334 TVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMR 393

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P V   T +I   CK G+  EA      M + G   D+V Y+  I G     +VD
Sbjct: 394 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVD 453

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            A+ +  ++   G  P+VV+ + I+ GLCK  RV EA  L  +M
Sbjct: 454 EAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 154/295 (52%), Gaps = 5/295 (1%)

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   N +  N+L++   N     E+Y + ++   + F+P  FT  ++ R  C+ + +  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           +NL+ +M+  G  P +     LI++LC+     +A +    M+     PD   Y+  IG 
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L  I ++DLA   F  +   GC PD V Y +++  L KA +  +   +F EM++KG  P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TY  ++NG+CK+G IDQA L L R L+    SP    Y+TLIDGLC   R D+A  L+
Sbjct: 192 LVTYATVVNGYCKAGRIDQA-LSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF 250

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALI 647
            EM   G   + I + + I+GLCK  +   A  VH +M+ E G  PD   +  +I
Sbjct: 251 -EM-AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI-EAGCAPDPVSYNVII 302



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 188/414 (45%), Gaps = 26/414 (6%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
            G LIR L  +   ++A  +F Q+    +  P+ + Y  ++  LCK   +DL     + M
Sbjct: 90  FGSLIRKLCELNFTDKALQIFHQMIDMKV-KPDAFLYTVVIGHLCKINKLDLAASYFERM 148

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
              G   DK T T L+     + ++++   +F E++  G   E V ++ ++  + K G +
Sbjct: 149 VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRI 208

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A  L+ R+       +   +  LI G  K  R D+A +LF+    +G   D  +Y   
Sbjct: 209 DQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSF 266

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS------CSDEGEL--------- 256
           I GLCK  +L+ A  ++ +M  +G  PD    + +I S       S+  EL         
Sbjct: 267 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 326

Query: 257 -------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                  T+LV  + + R V    ++   ++       S+     ++  + K + + D  
Sbjct: 327 MPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAY 386

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           V +  + +    P+  ++  II+   K G+LD A  LF+ M + GC  +V  YN LI G 
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY 446

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           C + +++E+  ++ EM   G +P   +L+++   LC+   V  A  L+ KM  +
Sbjct: 447 CRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 99/193 (51%), Gaps = 1/193 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +  R++  + L    ++ +C         L+  L     VEEA ++ +++   G   P
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +Y+ +++ LCK+  +D   + L++M+  G   D  T T ++  +C  G+ D+A  +F
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + + G  +D   ++IL+  + +  +VD+A  +IE M    I+ N  +   ++ G  K+
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484

Query: 184 SRVDKALQLFDKM 196
           SRV++A  L +KM
Sbjct: 485 SRVEEARLLMEKM 497


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 198/781 (25%), Positives = 345/781 (44%), Gaps = 141/781 (18%)

Query: 4   ILSRARRIAPLRVLAQ--------------DVVKSRCFMSPGALGFLIRCLGSVGLVEEA 49
           IL+RARR    R L                +V +   F S  +   L+R     G +  A
Sbjct: 109 ILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTF-SAVSFDLLLRAHADAGQLSSA 167

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
             +FD + + G C P+  S N LL  L +S    +  M   +M+  G   D++T+  + +
Sbjct: 168 LNVFDGMGKVG-CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 110 VYCNSGQFDKA---------------LSVFNEIID----HGWVDEH-------------- 136
            YC  G+  +A               L  ++ ++D     GW ++               
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 137 ---VFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
               +++L+  + K G +++A  +++ M +  +I ++E  + ++I+G+ ++ R+D A ++
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
            ++M  +G   +  +Y+ +I GLCK  ++E   ++  EM+  G+ PD    + LI     
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYN-LLQAMIKGEPIADVG 309
           EG +    ++ +E         +C    R++V NG  +    YN LL+       I D  
Sbjct: 407 EGSM----RKAFE---------MC----RMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
               ++ K  V+PN  S   +++ L K GK + AL+L++E    G  +NV  +N +I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-- 427
           C   R+ E+ ELL  M+E    P   T  ++F   C+   +  A +L+ KM   G  P  
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 428 ---------------WVKHNTL------------------LIKELCKHGKAMEAFRFLTD 454
                          W K N +                  LI   CK G   EA     +
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 455 MVQEGFLPDIVCYSAAIG-----------------------------GLIDIKRVDLALE 485
           MV  G  P++   SA +                                I+I ++   ++
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
              D   H      V +N+II GLCK+ R+A+A+ LF  +  K  +P   TY+ LI+G  
Sbjct: 690 TIADGNPHSAN---VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
            SG+ID+A   L  ++     +P++ITY +LI GLC +G+   A+ L+N+++ KG +PN 
Sbjct: 747 ASGSIDEA-FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           IT+  LI   CK  +   A    + M E+G++P +  +  LI    ++     A ++L +
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQ 865

Query: 666 M 666
           M
Sbjct: 866 M 866



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 171/657 (26%), Positives = 297/657 (45%), Gaps = 59/657 (8%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG-W 97
           C   +G  E+A  + + ++R+GL  PN  +Y  L++  CK   ++  E  +KEM++ G  
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLS-PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACE 156
             D+     ++  YC  G+ D A  V NE+ D G  V+  V++ ++    K G +++  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +++ M+D  +R ++ ++  LI G+ ++  + KA ++   M ++G A+    Y+ ++ G C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 217 KNKQLEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
               ++ AL+L+  M   G+ P+      +L  L  +   E  L L  + +      N +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------------IADVGVEMLMIF 316
           T   N+++  L   G + +A  LL  M  ++  P              +  +G    ++ 
Sbjct: 501 TF--NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 317 KGT---VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           K      +P+   F+  I       +      +  EM+  G   N+  Y  LI G C   
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------- 423
            L E+  L  EM  +G  P  F  +++  C  +   V  A NLV +  V           
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLVLQKLVNIDMIPGCSIS 677

Query: 424 ------------------GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                              H   V  N ++   LCK G+  +A      +  + FLPD  
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFG-LCKSGRIADAKSLFESLRNKRFLPDNF 736

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS+ I G      +D A  L   + + G  P+++ YN +I GLCK+ +++ A +LFN++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            +KG+ P+  TYN LI+ +CK G   +A     +M+E E   P VITY+ LI GLC  G 
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE-EGIQPTVITYSILIYGLCTQGY 855

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            ++AI L ++M E    PN IT+  LI G  K          +  M  +G+ P  ++
Sbjct: 856 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 251/566 (44%), Gaps = 86/566 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +G +EE   +  +++  G+  P+ YSYN L++  C+  S+       + M   
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGM-RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 96  GWGYDKYTLTPLLQVYCN-----------------------------------SGQFDKA 120
           G      T   LL+ +C+                                   +G+ ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L+++ E +  G     + F+ ++    K G + +A EL++RM +     +  T+  L  G
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K  ++  A  L +KM   GFA    M++  I G    KQ      ++SEM   G++P+
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 240 FEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
                 LI     EG L       +E  +  +N    +C+++M      G +D+A  +LQ
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 298 A-----MIKGEPIADVGVEMLMIFKGTVS---PNTSS--FDIIINTLLKDGKLDLALSLF 347
                 MI G  I+ + ++ +     T++   P++++  +++II  L K G++  A SLF
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             +     + + F Y++LI G   S  ++E++ L   M  +G  P   T NS+   LC+ 
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 408 QDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
             +  A+NL  K++ +G  P  + +NTL I E CK GK  EAF+    MV+EG  P    
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTL-IDEYCKEGKTTEAFKLKQKMVEEGIQPT--- 839

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
                                           V+ Y+I+I GLC    + EA  L ++MI
Sbjct: 840 --------------------------------VITYSILIYGLCTQGYMEEAIKLLDQMI 867

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQ 552
              + P+  TY  LI+G+ KSGN+++
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEE 893



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 174/445 (39%), Gaps = 72/445 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +G + EA  L D++K E  C P++ +Y  L +  CK   +      + +M+  
Sbjct: 505 VINGLCKIGRMAEAEELLDRMK-ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+          +  +  + Q+ K   + +E+   G     V +  L+  + K G + +A
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA------------------------- 189
           C L   M +  +  N      L+  F K+ +VD+A                         
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDK 683

Query: 190 -LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
              + D +      S   M++VII GLCK+ ++  A  L+  ++     PD    S LI 
Sbjct: 684 ISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIH 743

Query: 249 SCSDEGELTLLVKEIWEDRDV--------NTMTLLCNSIMRILVSNGSIDQAYNLLQAM- 299
            C+  G     + E +  RDV        N +T   NS++  L  +G + +A NL   + 
Sbjct: 744 GCAASGS----IDEAFSLRDVMLSAGLTPNIITY--NSLIYGLCKSGKLSRAVNLFNKLQ 797

Query: 300 -------------------IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                               +G+      ++  M+ +G + P   ++ I+I  L   G +
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG-IQPTVITYSILIYGLCTQGYM 856

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A+ L  +M +     N   Y  LI G   S  +EE  +L  EM   G  PT++  N  
Sbjct: 857 EEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN-- 914

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH 425
                +R D V   N  RK    GH
Sbjct: 915 ----WKRSDPVVVNNWNRK---DGH 932


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 267/569 (46%), Gaps = 21/569 (3%)

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIER 160
           K T   LL     + +F K    F+ +      D ++F+  + AF K G+V++A EL  +
Sbjct: 218 KTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSK 277

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++  +  N  T+  +I G     R D+A    +KM + G       Y +++ GL K K+
Sbjct: 278 MEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKR 337

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           +  A  +  EM   G  P+  + + LI S  + G L   + +K++   + ++  +   N+
Sbjct: 338 IGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 397

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +++    +G  D A  LL+ M+       +G  +          N  SF  +I  L    
Sbjct: 398 LIKGYCKSGQADIAERLLKEML------SIGFNV----------NQGSFTSVICLLCSHH 441

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
             D AL    EM          L   LI GLC   +  ++ EL  +    GF     T N
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++   LC    +     + +++  +G     V +NTL I   C + K  EAF F+ +MV+
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTL-ISGCCGNKKLDEAFMFMDEMVK 560

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  PD   YS  I GL+++ +V+ A++ + D   +G  PDV  Y+++I G CKA+R  E
Sbjct: 561 KGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEE 620

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
            + LF+EM++  L P+   YN LI  +C+SG +  A L L   ++ +  SP+  TYT+LI
Sbjct: 621 GQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMA-LELREDMKHKGISPNSATYTSLI 679

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            G+ I  R ++A +L  EM  +G  PN   + ALI G  K  +        R M  K + 
Sbjct: 680 KGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 739

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+   +  +I  +  + N   A  +L EM
Sbjct: 740 PNKITYTVMIGGYARDGNVTEASRLLHEM 768



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 248/534 (46%), Gaps = 27/534 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G VEEA  LF +++  G+ VPN  +YN +++ L  S   D   M  ++M + G      T
Sbjct: 266 GKVEEAIELFSKMEEAGV-VPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLIT 324

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L++    + +   A  V  E+ + G+  +  V++ L+ +  + G ++KA E+ + M 
Sbjct: 325 YSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMV 384

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + L   T+  LI G+ K  + D A +L  +M   GF  +   +  +I  LC +   +
Sbjct: 385 SKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFD 444

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSI 279
            AL+   EM    ++P   +L+ LI+     G+ +  V E+W    ++     T   N++
Sbjct: 445 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV-ELWLKFLNKGFLVDTKTSNAL 503

Query: 280 MRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEML-------------------MIFKGT 319
           +  L   G +++ + + + ++ +G  +  V    L                   M+ KG 
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG- 562

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + P+  ++ I+I  LL   K++ A+  + +  + G + +V+ Y+ +IDG C + R EE  
Sbjct: 563 LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQ 622

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L  EM  +  +P     N +    CR   +  AL L   M+ +G  P     T LIK +
Sbjct: 623 KLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 682

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
               +  EA   L +M  EG  P++  Y+A I G   + ++     L R++ +    P+ 
Sbjct: 683 SIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 742

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           + Y ++I G  +   V EA  L +EM  KG++P   TY   I G+ K G + QA
Sbjct: 743 ITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 225/545 (41%), Gaps = 65/545 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L++A+RI     + +++ +      P  + +  LI  L   G + +A  + D +  +GL 
Sbjct: 332 LTKAKRIGDAYCVLKEMTEKG--FPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLS 389

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           + ++ +YN L++  CKS   D+ E  LKEM   G+  ++ + T ++ + C+   FD AL 
Sbjct: 390 LTSS-TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALR 448

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              E++         + + L+    K G+  KA EL  +  +    ++ KT   L+HG  
Sbjct: 449 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLC 508

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++++  ++  ++   GF  D   Y+ +I G C NK+L+ A     EM   G+ PD  
Sbjct: 509 EAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNY 568

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI    +  ++   + + W D   N M                             
Sbjct: 569 TYSILIRGLLNMNKVEEAI-QFWGDCKRNGMI---------------------------- 599

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  ++ ++I+   K  + +    LF EM       N  +
Sbjct: 600 --------------------PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVV 639

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI   C S RL  + EL  +M+  G  P   T  S+ + +     V  A  L+ +MR
Sbjct: 640 YNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMR 699

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++G EP V H T LI    K G+ ++    L +M  +   P+ + Y+  IGG      V 
Sbjct: 700 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 759

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  L  ++   G  PD + Y   I G  K   V +A    +E            Y  +I
Sbjct: 760 EASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE----------ENYAAII 809

Query: 542 NGWCK 546
            GW K
Sbjct: 810 EGWNK 814



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 99/181 (54%), Gaps = 2/181 (1%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           LAL++F  +   G  P     NI+++ L +A    +  + F+ ++ KG+ P V  +   I
Sbjct: 201 LALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH-VVCKGVSPDVYLFTTAI 259

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           N +CK G +++A+   S+M E+    P+V+TY T+IDGL ++GR D+A M   +M E+G 
Sbjct: 260 NAFCKGGKVEEAIELFSKM-EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  IT+  L+ GL K  R   A    + M EKG  P++ V+  LI + +   +   A E
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378

Query: 662 V 662
           +
Sbjct: 379 I 379



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A D+F  +  KG+ PS  T N+L+    ++    +   C +  +  +  SPDV  +TT I
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKC--CEAFHVVCKGVSPDVYLFTTAI 259

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +  C  G+ ++AI L+++MEE G  PN +T+  +I GL    R   A +    M E+G++
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  +  L+           A+ VLKEM
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEM 348


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 274/566 (48%), Gaps = 29/566 (5%)

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N  +  +     NEI   G+    +  + LL+  +K+  V+ A  L ++M +  I+ +  
Sbjct: 182 NEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLL 241

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  LI+   KK +V +A  +  ++ +   + D   Y  +I G C+N+ L++A  ++  M
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 232 KGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRDVNTMTLLCNSI------ 279
              G  P+    S LI    +EG   E   +++E+ E   +  V T TL   ++      
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 280 ---------MRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                    M+      ++     L+  + + G+    +G+   M+ +G V PNT +++ 
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV-PNTVTYNA 420

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN L   G+   AL +F  M   G + N   YN +I GLC    +E++  L  +M + G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP--WVKHNTLLIKELCKHGKAME 447
             PT  T N++      + +V  A  L+  M+  G EP  W  +   L+    K GK   
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE--LVSGFSKWGKLES 538

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A  +  +MV+ G  P+ V Y+  I G     +VD+AL L   +   GC P+V +YN +I+
Sbjct: 539 ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVIN 598

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL K  R +EAE + ++M  +GL+P+V TY  LI+G C++G    A      M EK    
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCL 657

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P++ TY++LI GLC  G+ D+A +L  EME KG AP+ +TF +LI G     R   A + 
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 717

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
            R M + G KP+   +  L+     E
Sbjct: 718 LRRMVDVGCKPNYRTYSVLLKGLQKE 743



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 183/676 (27%), Positives = 313/676 (46%), Gaps = 54/676 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L F  LI  L   G V EA ++  Q+ +  L  P+ ++Y  L+   C++ ++DL 
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFTYTSLILGHCRNRNLDLA 294

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
                 M   G   +  T + L+   CN G+ D+AL +  E+I+ G     + +++ + A
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                  ++A EL+ RM     R N +T+  LI G  +  +++ A+ L+ KM K G   +
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVK 261
              Y+ +I  LC   +   AL+++  M+G G   + +  +++I      G++    +L +
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG--EPIADVGVEMLMIFKG- 318
           ++ +   + T+    N+++   ++ G+++ A  LL  M +   EP      E++  F   
Sbjct: 475 KMLKMGPLPTVVTY-NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 533

Query: 319 ----------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++PN  S+  +I+   KDGK+D+ALSL   M ++GC  NV  Y
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I+GL   NR  E+ ++  +M E G  P   T  ++   LCR      A  +   M  
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P +   + LI  LC+ GKA EA   L +M ++G  PD V +++ I G + + R+D 
Sbjct: 654 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 713

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCK-----AQRVA---EA---------------- 518
           A  L R +   GC P+   Y++++ GL K      ++VA   EA                
Sbjct: 714 AFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIV 773

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLI 577
            +L   M   G  P++ TY+ L++G C+ G   +A   +  M  KE G  PD   Y +L+
Sbjct: 774 SNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM--KERGFCPDREIYYSLL 831

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
              C     D A+ +++ +E KG   +   + ALI  LCK  +   A   F  M EK   
Sbjct: 832 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 891

Query: 638 PDMFVFVALISAFLSE 653
            D  V+  L+   L E
Sbjct: 892 ADEIVWTVLVDGLLKE 907



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 230/526 (43%), Gaps = 83/526 (15%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I     +  + +     ++++  GF       + ++  L K + +E A  LY +M  S
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           GI P                                   L  N+++ IL   G + +A  
Sbjct: 235 GIQPSL---------------------------------LTFNTLINILSKKGKVREAEL 261

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L                  IF+  +SP+  ++  +I    ++  LDLA  +F  M + G
Sbjct: 262 ILS----------------QIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 305

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  N   Y+ LI+GLCN  R++E+ ++L EM E G +PT +T       LC  +    A+
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 365

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            LV +M+ +G  P V+  T LI  L + GK   A      M++EG +P+ V Y+A I  L
Sbjct: 366 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R   AL++F  +  HG   +   YN II GLC    + +A  LF +M+  G +P+V
Sbjct: 426 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 485

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEK----------------------ESGS----- 567
            TYN LING+   GN++ A   L  M E                       ES S     
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545

Query: 568 -------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                  P+ ++YTTLIDG    G+ D A+ L   MEE GC PN  ++ A+I GL K +R
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A      M E+G+ P++  +  LI           AF++  +M
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 151/581 (25%), Positives = 265/581 (45%), Gaps = 53/581 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G +E A  L+ ++ +EGL VPN  +YN L+  LC              M+ +
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGH 444

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   +++  C  G  +KA+ +F +++  G +   V ++ L+  +   G V+ A
Sbjct: 445 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 504

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++ M +     +E T+  L+ GF K  +++ A   F +M + G   +   Y  +I G
Sbjct: 505 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWED---RD 268
             K+ ++++AL L   M+  G  P+ E  + +I   S E   +   K   ++ E     +
Sbjct: 565 HSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPN 624

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T L + + R    NG    A+ +   M K + +                PN  ++ 
Sbjct: 625 VITYTTLIDGLCR----NGRTQFAFKIFHDMEKRKCL----------------PNLYTYS 664

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L ++GK D A  L +EM + G   +   + +LIDG     R++ ++ LLR M + 
Sbjct: 665 SLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDV 724

Query: 389 GFKPTHFTLNSMFRCLCR-----------RQDVVGAL-------------NLVRKMRVQG 424
           G KP + T + + + L +           + + V +              NL+ +M   G
Sbjct: 725 GCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIG 784

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            EP +   + L+  LC+ G+  EA + + DM + GF PD   Y + +        VD AL
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           ++F  I A G    +  Y  +I  LCKA +V EA+ LF+ M+ K        + +L++G 
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            K G +D  M  L  ++E ++ +P++ TY  L   L   G+
Sbjct: 905 LKEGELDLCMKLL-HIMESKNFTPNIQTYVILGRELSRIGK 944



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 245/515 (47%), Gaps = 48/515 (9%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           CLG  G +E+A +LF+++ + G  +P   +YN L+       +V+     L  M++ G  
Sbjct: 461 CLG--GDIEKAMVLFEKMLKMG-PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 517

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL 157
            D++T   L+  +   G+ + A   F E+++ G     V ++ L+   SK G+VD A  L
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +ERM++     N +++  +I+G  K++R  +A ++ DKM + G   +   Y  +I GLC+
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTL 274
           N + + A +++ +M+     P+    S LI     EG   E  +L+KE+ E + +    +
Sbjct: 638 NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM-ERKGLAPDEV 696

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              S++   V  G ID A+ LL+ M+      DVG +          PN  ++ +++  L
Sbjct: 697 TFTSLIDGFVVLGRIDHAFLLLRRMV------DVGCK----------PNYRTYSVLLKGL 740

Query: 335 LK------------------------DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            K                        D   ++  +L   M++IGC   +  Y+ L+ GLC
Sbjct: 741 QKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLC 800

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R  E+ +L+++M+E GF P      S+    C+  +V  AL +   +  +G +  + 
Sbjct: 801 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 860

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI  LCK G+  EA     +M+++ +  D + ++  + GL+    +DL ++L   +
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            +    P++  Y I+   L +  +  E+E L +++
Sbjct: 921 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 188/457 (41%), Gaps = 60/457 (13%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           + S  S+  ++       Q++V+  C ++P  + +  LI      G V+ A  L ++++ 
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G C PN  SYN ++  L K       E    +M + G   +  T T L+   C +G+  
Sbjct: 584 MG-CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 119 KALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A  +F+++     +   + +S L+    + G+ D+A  L++ M+   +  +E TF  LI
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 702

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL---C------------------ 216
            GFV   R+D A  L  +M   G   +   Y V++ GL   C                  
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762

Query: 217 ---KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE----- 265
              K+   E+   L + M   G  P  +  S L++    +G   E   LVK++ E     
Sbjct: 763 PHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           DR++    L+ +        N  +D A  +  +      I   G ++          + S
Sbjct: 823 DREIYYSLLIAH------CKNLEVDHALKIFHS------IEAKGFQL----------HLS 860

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            +  +I  L K G+++ A +LF  M +     +  ++  L+DGL     L+   +LL  M
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           E   F P   T   + R L R    + +  L  K++V
Sbjct: 921 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 957


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 167/643 (25%), Positives = 285/643 (44%), Gaps = 56/643 (8%)

Query: 2   ASILSRARRIAPLRV-LAQDVVKS---RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVK 57
           A IL   RR    RV + + +V S    C  +      LIR       + E    F  ++
Sbjct: 16  ALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILR 75

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            +G  V  N + N LL  L K   V+L     +E+   G   + YTL  ++   C  G+F
Sbjct: 76  SKGYLVSIN-ACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKF 134

Query: 118 DKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D   S  +E+  +G + D   ++ L+ A+ + G +++A E++  M D  ++ +  T+  +
Sbjct: 135 DDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAI 194

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+G  KK R  +A  +  +M   G + D   Y+ ++   C+      A +++ EM   G+
Sbjct: 195 INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD    S LI                                  +   N  +DQA    
Sbjct: 255 VPDLVSFSSLIA---------------------------------VFSRNRHLDQALVYF 281

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M K   +                P+   + ++++   ++G +  AL +  EM + GC+
Sbjct: 282 RDMKKFGLV----------------PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV 325

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN +++GLC    L ++ +L  EM E G  P  +T  ++    C+  ++  AL+L
Sbjct: 326 LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL 385

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M  +  +P +     LI   CK G+  +A      M+     P+ + Y   I     
Sbjct: 386 FGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCS 445

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +  V  A  L+  +   G  P +V  N +I G C++   ++A++    MI KG+ P   +
Sbjct: 446 VGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 505

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LING+ +  N+D+A L +++M EKE   PD+ITY  +++G C  GR  +A ++  +M
Sbjct: 506 YNTLINGFVREDNMDKAFLWINKM-EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            EKG  P+R T+ ALI G    D    A      M ++G  PD
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 262/577 (45%), Gaps = 30/577 (5%)

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACE 156
           G +      L++ Y  + +  +    F  +   G+ V  +  + LL    K   V+ A E
Sbjct: 45  GTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWE 104

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +   +    I LN  T  ++++   K  + D       +M  +G  +D   Y+ +IG  C
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVK--EIWEDRDVN 270
           +   LE A ++ + M   G+ P     + +I     +G       +L++   I    D  
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 271 TM-TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           T  TLL  S  R      +  +A  +   M++               +G V P+  SF  
Sbjct: 225 TYNTLLVESCRR-----DNFSEAKEIFGEMLR---------------QGVV-PDLVSFSS 263

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I    ++  LD AL  FR+M + G + +  +Y  L+ G C +  + E+ ++  EM E G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                   N++   LC+ + +  A  L  +M  +G  P     T LI   C+ G   +A 
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                M Q    PDIV Y+  I G   +  ++ A EL+  + +    P+ + Y I+I+  
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C    V+EA  L++ MI KG+ P++ T N +I G+C+SG+  +A   L RM+ K   +PD
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK-GVAPD 502

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
            I+Y TLI+G       D A +  N+ME++G  P+ IT+  ++ G C+  R + A +  R
Sbjct: 503 HISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLR 562

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M EKG+ PD   + ALI+  +++ N   AF    EM
Sbjct: 563 KMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEM 599



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 232/530 (43%), Gaps = 75/530 (14%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++H FV+  R+  A  L  +M +    S   + + ++  +C N                 
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGN----------------- 43

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG---SIDQA 292
                          ++     LL++   + R +   T       RIL S G   SI+  
Sbjct: 44  -------------CGTNNLVFDLLIRTYVQARKLREGT----EAFRILRSKGYLVSINAC 86

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            +LL  ++K + +         + +  +  N  + +I++N L KDGK D   S   EM  
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++  YN LI   C    LEE++E++  M + G KP+ FT N++   LC++     
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 413 ALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A  ++ +M   G  P    +NTLL+ E C+     EA     +M+++G +PD+V +S+ I
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLV-ESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265

Query: 472 GGLIDIKRVDLALELFRD-----------------------------------ICAHGCC 496
                 + +D AL  FRD                                   +   GC 
Sbjct: 266 AVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV 325

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            DV+AYN I++GLCK + + +A+ LF+EM+ +G +P   T+  LI+G C+ GN+ +A+  
Sbjct: 326 LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL 385

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
              M ++    PD++ Y TLIDG C  G  + A  LW+ M  +   PN IT+  LI   C
Sbjct: 386 FGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                  A   + +M EKG+KP +     +I  +    +   A E L  M
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 44  GLVEEANM-----LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           G V E NM       +++++EGL +P+  +YN ++   C+   +   E+ L++M + G  
Sbjct: 512 GFVREDNMDKAFLWINKMEKEGL-LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGIN 570

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
            D+ T T L+  +      ++A    +E++  G+  + VF
Sbjct: 571 PDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 282/611 (46%), Gaps = 28/611 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A   F+++ R     P    ++ LL A+ +            ++Q  G      T T
Sbjct: 36  VDDAVTCFNRMVRV-FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  Y +      A S+   I+  G+    V F+ ++  F   G + KA +  + +   
Sbjct: 95  ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               ++ T+  LI+G  K  ++  AL L  +M KS    +  MY  +I GLCK+  +  A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEG---ELT-LLVKEIWEDRDVNTMTLLCNSIM 280
           L L S++   GI  D    + LI  C   G   E+T LL K + E+ D +  T   N ++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF--NILI 272

Query: 281 RILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
             L   G I +A  +L  M K GE                  P+  +++ ++        
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGE-----------------KPDIVTYNALMEGYCSREN 315

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A  LF  M + G   +V  YN LIDG C +  ++E+  L +E+      PT  + NS
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC    +     L+ +M      P V    +LI  LCK G+ +EA   L  M+++G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P+IV Y+A + G      V++A ++F  +   G  PD++ YN++I+G CK + V EA 
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF EM  K LIP +A+YN LI+G C  G I      L  M +    SPDVITY  L+D 
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD-SGQSPDVITYNILLDA 554

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C     D AI L+ ++ E G  P+  T  A++  LCK ++ + A    + +   G  P+
Sbjct: 555 FCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN 613

Query: 640 MFVFVALISAF 650
           +  +  LI+A 
Sbjct: 614 VQTYTILINAL 624



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 245/556 (44%), Gaps = 51/556 (9%)

Query: 112 CNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C     D A++ FN ++         VF  LL A  + G    A  L  ++    I  + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            TF +LI+ +  +S    A  L   + KSG+  +   ++ II G C N  +  AL     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   G   D      LI   S                                  NG I 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLS---------------------------------KNGQIK 177

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A +LLQ M K                 +V PN   +  +I+ L KDG +  AL L  ++
Sbjct: 178 AALHLLQEMEKS----------------SVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G + +   YN+LIDG C+  R +E  +LL +M      P  +T N +   LC+   +
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + A  ++  M  +G +P +     L++  C      EA      MV+ G  PD++ Y+  
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G    K VD A+ LF+++C     P + +YN +I GLC + R++  + L +EM     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P V TYN+LI+  CK G I +A+  L  M+ K+   P+++TY  ++DG C+    + A 
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMM-KKGVKPNIVTYNAMMDGYCLRNNVNVAK 460

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++N M + G  P+ + +  LI G CK +    A+V F+ M+ K + PD+  + +LI   
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520

Query: 651 LSELNPPLAFEVLKEM 666
            +    P   E+L EM
Sbjct: 521 CNLGRIPHVQELLDEM 536



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 298/677 (44%), Gaps = 70/677 (10%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R F  P    F  L+  +  +G    A  LF Q++ +G+  P+  ++  L+         
Sbjct: 48  RVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS-PSIATFTILINCYFHQSHT 106

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
                 L  +   G+  +  T   ++  +C +G   KAL     ++  G++ D+  +  L
Sbjct: 107 AFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTL 166

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +   SK G++  A  L++ M+  +++ N   +  LI G  K   V  AL L  ++ + G 
Sbjct: 167 INGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGI 226

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---- 257
             DA  Y+ +I G C   + +   QL ++M    + PD    + LI +   EG +     
Sbjct: 227 LLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQG 286

Query: 258 --LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              ++ +  E  D+ T     N++M    S  ++ +A  L   M+K       G+E    
Sbjct: 287 VLAMMSKRGEKPDIVTY----NALMEGYCSRENVHEARELFNRMVKR------GLE---- 332

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  +++++I+   K   +D A+ LF+E+     +  +  YN+LIDGLCNS R+
Sbjct: 333 ------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
               +LL EM  S   P   T N +   LC+   ++ AL ++  M  +G +P +     +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   C       A      MV+ G  PDI+ Y+  I G    + VD A+ LF+++     
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD+ +YN +I GLC   R+   ++L +EM   G  P V TYN+L++ +CK+   D+A+ 
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 556 CLSRMLEK---------------------------------ESGSPDVITYTTLIDGLCI 582
              +++E                                     SP+V TYT LI+ LC 
Sbjct: 567 LFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC------KCDRPRAALVHFRMMK-EKG 635
            G   +A++L ++ME+    P+ ITF  +I  L       K ++ R  ++   ++  EK 
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKS 686

Query: 636 MKPDMFVFVALISAFLS 652
           +     VF    S F S
Sbjct: 687 LNQSHNVFFPASSGFQS 703



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 253/560 (45%), Gaps = 32/560 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L   G ++ A  L  ++++  +  PN   Y+ L++ LCK   V        ++ 
Sbjct: 164 GTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVD 152
           + G   D  T   L+   C+ G++ +   +  +++      D++ F+IL+ A  K G + 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  ++  M     + +  T+  L+ G+  +  V +A +LF++M K G   D   Y+V+I
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------D 266
            G CK K ++ A+ L+ E+    + P     + LI    + G ++ + K + E       
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM----------- 314
            DV T  +L ++    L   G I +A  +L  M+K G     V    +M           
Sbjct: 403 PDVVTYNILIDA----LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 315 -------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                  + K  + P+  +++++IN   K   +D A+ LF+EM     + ++  YN+LID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLCN  R+    ELL EM +SG  P   T N +    C+ Q    A++L R++ V+G  P
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWP 577

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
               N  ++  LCK  K   A   L  ++  G  P++  Y+  I  L        A+ L 
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +  +   PD + + III  L +     +AE L  EMI +GL+    + N   N +  +
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPA 697

Query: 548 GNIDQAMLCLSRMLEKESGS 567
            +  Q++    R+    +GS
Sbjct: 698 SSGFQSVTEFYRVQASHAGS 717


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 277/609 (45%), Gaps = 59/609 (9%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P A+  L R L   G       LF  V R+G C PNN+++N L+   C+     + E  
Sbjct: 252 NPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPC-PNNFTFNLLILEFCRKGWTRIGEAL 310

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSK 147
           L  M  +    D Y+   ++   C  GQ   AL + N +I++G       F  ++ AF K
Sbjct: 311 LHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCK 370

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM----------- 196
            G V+ A +  + ++D  +  N   + ++I G+VK   + +A  LF++M           
Sbjct: 371 EGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGIT 430

Query: 197 ------------------------TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
                                   + SG   D+++ DV + GLC   + + A++L   + 
Sbjct: 431 FNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLL 490

Query: 233 GSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           G GI P     + +I +  + G  E       I     +   +  C+S++  LV  GS+D
Sbjct: 491 GKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLD 550

Query: 291 QAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           +A+  L  MI KG P+ ++                 +F ++++   + G +++A SL+ E
Sbjct: 551 EAWIALYDMIDKGFPVTNM-----------------AFTVLLDGYFRIGAVNMAESLWNE 593

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +   +   I+GLC S  + ++Y++  +M   GF P +F  NS+    C+   
Sbjct: 594 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 653

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL LVR+M  +G  P +    ++I  LCK G+   A     DM + G  PDIV Y+ 
Sbjct: 654 LNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNT 713

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      V  A +L   +   G  PD+  YNI I G C  +++  A  +  E+I+ G
Sbjct: 714 LIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 773

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           ++P+  TYN +IN  C    +D AM+  +++L K +  P+ +T   L+   C  G P+ A
Sbjct: 774 IVPNTVTYNTMINAVCNV-ILDHAMILTAKLL-KMAFVPNTVTVNVLLSQFCKQGMPEKA 831

Query: 590 IMLWNEMEE 598
           I    ++ E
Sbjct: 832 IFWGQKLSE 840



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 152/646 (23%), Positives = 281/646 (43%), Gaps = 48/646 (7%)

Query: 14  LRVLAQDVVK-SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY-NC 71
           LR LAQD+V      + PG      R       + E + +++          ++YS  + 
Sbjct: 180 LRFLAQDIVSWVVARIGPG------RSKNLAAFMWEGHRVYE----------SDYSVLDT 223

Query: 72  LLEALCKS-CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           L+ A  KS    + +E+ L +M++ G   +   ++ L ++   +G       +F +++  
Sbjct: 224 LMRAFVKSEMHFEALEI-LSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRK 282

Query: 131 GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G   +   F++L++ F + G       L+  M       +  ++ ++I+    K +   A
Sbjct: 283 GPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYA 342

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKL 246
           L L + M ++G     A +  II   CK   +E+A + + E++  G++ +   + I+   
Sbjct: 343 LHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISG 402

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                D  +  LL +E+   +D+    +  N+++      G  +    LL+         
Sbjct: 403 YVKARDISQANLLFEEM-RTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLR--------- 452

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D+ V  L+        ++S  D+ +  L   G+ D A+ L   +   G   +V  +N++I
Sbjct: 453 DLSVSGLL-------HDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSII 505

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
               N+   E ++     M + G  P+  T +S+   L R+  +  A   +  M  +G  
Sbjct: 506 AAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFP 565

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                 T+L+    + G    A     +M   G  PD V ++A I GL     +  A ++
Sbjct: 566 VTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDV 625

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F D+   G  P+   YN +I G CK  ++ EA  L  EM  +GL+P + T N++I G CK
Sbjct: 626 FSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCK 685

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA---GRPDDAIMLWNEMEEKGCAP 603
            G +  A+     M  +   SPD++TY TLIDG C A   G  DD +M   +M + G  P
Sbjct: 686 QGRMKLAIETFMDMC-RMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM---KMSDSGWEP 741

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +  T+   I G C   +   A++    +   G+ P+   +  +I+A
Sbjct: 742 DLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINA 787



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 214/505 (42%), Gaps = 58/505 (11%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELT 257
           + SD ++ D ++    K++    AL++ S+M+  G+TP+     IL +L+    D G   
Sbjct: 214 YESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA-- 271

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF- 316
                +W+        L  + + +    N   +  +NLL      +    +G  +L +  
Sbjct: 272 -----VWK--------LFGDVVRKGPCPN---NFTFNLLILEFCRKGWTRIGEALLHVMG 315

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K    P+  S++I+IN     G+   AL L   M + GC  ++  +  +ID  C    +E
Sbjct: 316 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVE 375

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLL 435
            + +   E+E+ G        N M     + +D+  A  L  +MR +   P  +  NTL+
Sbjct: 376 LARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLV 435

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
                ++GK  +  R L D+   G L D       + GL    R D A++L  ++   G 
Sbjct: 436 AGHY-RYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGI 494

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P VVA+N II+    A     A   +  M+  GL PS +T + L+    + G++D+A +
Sbjct: 495 PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 554

Query: 556 CLSRMLEK----------------------------------ESGSPDVITYTTLIDGLC 581
            L  M++K                                      PD + +   I+GLC
Sbjct: 555 ALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLC 614

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           I+G   DA  ++++M  KG  PN   + +LI G CK  +   AL   R M ++G+ PD+F
Sbjct: 615 ISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIF 674

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               +I     +    LA E   +M
Sbjct: 675 TVNMIICGLCKQGRMKLAIETFMDM 699



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 28/351 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + F  +I   G+ GL E A   +  + + GL  P++ + + LL +L +  S+D  
Sbjct: 494 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGL-TPSSSTCSSLLISLVRKGSLDEA 552

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            + L +M D G+       T LL  Y   G  + A S++NE+   G + D   F+  +  
Sbjct: 553 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 612

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G +  A ++   M       N   +  LI GF K  ++++AL+L  +M K G   D
Sbjct: 613 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVK 261
               ++II GLCK  ++++A++ + +M   G++PD    + LI       D G    L+ 
Sbjct: 673 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 732

Query: 262 EI----WED---------------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           ++    WE                R +N   ++   ++ + +   ++   YN +   +  
Sbjct: 733 KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTV--TYNTMINAVCN 790

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             +    +    + K    PNT + +++++   K G  + A+   +++++I
Sbjct: 791 VILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEI 841


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 279/599 (46%), Gaps = 43/599 (7%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M   G+  D++TL       C SG++ +ALS+  +  +    D  +++ ++    +    
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK--EEFVPDTVLYTKMISGLCEASLF 58

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           ++A + + RM   +   N  T+ +L+ G + K ++ +  ++   M   G      +++ +
Sbjct: 59  EEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSL 118

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGE----LTLLVKEIWED 266
           +   C++     A +L  +M   G  P + + + LI   CS E      L L  K   E 
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178

Query: 267 RDVNTMTLLCN--SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            +   +    N  +  R L   G  ++AYN+++ M+                KG + P+T
Sbjct: 179 LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMS---------------KGFI-PDT 222

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           S++  +I  L    K++ A  LF+EM + G   +V++Y  LID  C +  +E++     E
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ME  G  P   T  ++     + + V  A  +   M  +G  P +   T LI  LCK GK
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 445 AMEAFRFLTDMVQEGF-----------------LPDIVCYSAAIGGLIDIKRVDLALELF 487
             +A +    M +E                    P++  Y A + GL    +V  A +L 
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + +   GC P+ V Y+ +I G CKA ++ EA+++F  M+  G  P+V TY+ LI+   K 
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
             +D A+  LS+MLE  S +P+V+ YT +IDGLC  G+ D+A  L   MEEKGC PN +T
Sbjct: 463 KRLDLALKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVT 521

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + A+I G  K  R    L   + M  KG  P+   +  LI+   S      A ++L+EM
Sbjct: 522 YTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 172/656 (26%), Positives = 288/656 (43%), Gaps = 52/656 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R +RI  +      ++   C+ SP     L+      G    A  L  ++ + G C P
Sbjct: 93  LGRCKRILSM------MITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG-CQP 145

Query: 65  NNYSYNCLLEALCKSCS-----VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
               YN L+  +C S       +DL E    EM + G   +K  ++   +  C  G+F+K
Sbjct: 146 GYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEK 205

Query: 120 ALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A +V  E++  G++ D   +S ++       +V+KA +L + M    I  +   +  LI 
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            F K   +++A   FD+M + G A +   Y  +I    K++++  A ++Y  M   G TP
Sbjct: 266 SFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP 325

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           +    + LI                           LC +        G I++A  + + 
Sbjct: 326 NIVTYTALIDG-------------------------LCKA--------GKIEKASQIYKI 352

Query: 299 MIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           M K    I DV +   ++   +  PN  ++  +++ L K  ++  A  L + M+  GC  
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N  +Y+ LIDG C + +L+E+ E+   M E G+ P  +T +S+   L + + +  AL ++
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM      P V   T +I  LCK GK  EA++ +  M ++G  P++V Y+A I G    
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKS 532

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            RV+  LEL + + + GC P+ V Y ++I+  C    + EA  L  EM        VA Y
Sbjct: 533 GRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGY 592

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
             +I G+ +      A L LS  + +    P    Y  LID    AGR + A+ L  E+ 
Sbjct: 593 RKVIEGFNREF---IASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELS 649

Query: 598 EKG--CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                 A N+   + LI  L    +   A   +  M  +G  P++ + V LI   L
Sbjct: 650 SFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLL 705



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 215/502 (42%), Gaps = 74/502 (14%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A  LF ++KR G+  P+ Y Y  L+++ CK+  ++       EM+  G   +  T T
Sbjct: 238 VEKAFQLFQEMKRNGI-APDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  Y  S +  KA  V+  ++  G     V ++ L+    K G+++KA ++ + M   
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKE 356

Query: 165 NIRL-----------------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           N+ +                 N  T+  L+ G  K  +V +A  L   M+  G   +  +
Sbjct: 357 NVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVV 416

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
           YD +I G CK  +L+ A ++++ M   G  P+    S LI     +  L L +K + +  
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML 476

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           +       ++   ++  L   G  D+AY L                M+M+ +   +PN  
Sbjct: 477 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKL----------------MVMMEEKGCNPNVV 520

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I+   K G+++  L L ++M+  GC  N   Y  LI+  C++  L+E+++LL EM
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580

Query: 386 EESGFKPTHFT------------------------------LNSMFRCLCRRQDVVGALN 415
           +++ + P H                                +  ++R L       G L 
Sbjct: 581 KQT-YWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLE 639

Query: 416 LVRKM--RVQGHEPWVKHNT----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  ++   +    P+   N      LI+ L    KA +AF    DM+  G +P++     
Sbjct: 640 IALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVH 699

Query: 470 AIGGLIDIKRVDLALELFRDIC 491
            I GL+ + R + AL+L   IC
Sbjct: 700 LIKGLLRVNRWEEALQLLDSIC 721


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 272/604 (45%), Gaps = 51/604 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S+N L+   CK  SVD+ +     M  YG   D Y+   LL   C +G  ++AL  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            N++ +HG   + V ++IL   F   G +  A ++++RM    +  +  T+ +LI G  +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              ++++ +L +KM   G       Y V++  LCK+ +++ A+ L  EM+  G+ PD   
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI                                   L   G++++A  L + M   
Sbjct: 448 YSVLIHG---------------------------------LCKRGAVEEAIELYEEMCSK 474

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            + PN+     II+ L + G +  A   F  +T+    + + LY
Sbjct: 475 R----------------IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDG      + E+    +++ E G  PT  T NS+    C++  +  A+ L+  ++V
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     T L+   C+ G     F  L +M  +   P  + Y+  + GL    R+  
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +++L + + A G  PD + YN +I   CKA  + +A  L N+M+   L PS  TYN+LIN
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C  GN+  A   L   L+ +S     + YTT+I   C  G   +A++ +++M E+G  
Sbjct: 699 GLCVYGNLKDADRLLV-TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFE 757

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            +   + A+I  LCK +    A   F MM   G+ PD  + + +++AF    +P   FE+
Sbjct: 758 VSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEI 817

Query: 663 LKEM 666
              M
Sbjct: 818 FAMM 821



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 163/320 (50%), Gaps = 2/320 (0%)

Query: 332 NTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           N+LL + +  D+   ++ E+   G  QN +    LIDGLC  +RL+++   LRE     F
Sbjct: 207 NSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEF 266

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P+  + N++    C+   V  A +    M   G  P V    +L+  LC  G   EA  
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  DM   G  PDIV Y+    G   +  +  A ++ + +  +G  PD+V Y I+I G C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +   + E+  L  +M+++GL  S+ TY +L++  CKSG ID+A++ L  M E     PD+
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM-EVIGLKPDL 445

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY+ LI GLC  G  ++AI L+ EM  K   PN     A+I+GL +      A ++F  
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505

Query: 631 MKEKGMKPDMFVFVALISAF 650
           + +  +  ++ ++  +I  +
Sbjct: 506 VTKSDVAEEIILYNIMIDGY 525



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 4/311 (1%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +  +M  +    ++  YN+L+  L +++ + + Y    E++ SG     +T   +  
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILID 243

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LCR+  +  A+  +R+   +   P V     L+   CK G    A  F   M++ G LP
Sbjct: 244 GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+  Y+  + GL     ++ ALE   D+  HG  PD+V YNI+ +G      ++ A  + 
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M+  GL P + TY +LI G C+ GNI+++     +ML  +     ++TYT L+  LC 
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS-QGLKLSIVTYTVLLSSLCK 422

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           +GR D+A++L +EME  G  P+ +T+  LI GLCK      A+  +  M  K + P+ FV
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFV 482

Query: 643 FVALISAFLSE 653
             A+IS    +
Sbjct: 483 CSAIISGLFEK 493



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/483 (22%), Positives = 195/483 (40%), Gaps = 70/483 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE--MRLKE-MQDYGWGY 99
           +GL+  A  +  ++   GL  P+  +Y  L+   C  C +  +E   +LKE M   G   
Sbjct: 353 LGLISGAWKVVQRMLLNGLN-PDLVTYTILI---CGHCQMGNIEESFKLKEKMLSQGLKL 408

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
              T T LL   C SG+ D+A+ + +E+   G   D   +S+L+    K G V++A EL 
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELY 468

Query: 159 ERMDDCNIRLNEKTFC--VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           E M  C+ R+   +F    +I G  +K  + +A   FD +TKS  A +  +Y+++I G  
Sbjct: 469 EEM--CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTL 274
           K   +  A++ Y ++   GI+P     + LI     +G+L   VK  +  +   +   ++
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 586

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG---------------- 318
              ++M      G +   +++L  M + + I    +   ++ KG                
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEM-EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 645

Query: 319 ----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                + P+  +++ +I +  K   L  A  L  +M Q     +   YN LI+GLC    
Sbjct: 646 MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGN 705

Query: 375 LEESYELL-----------------------------------REMEESGFKPTHFTLNS 399
           L+++  LL                                    +M E GF+ +    ++
Sbjct: 706 LKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSA 765

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+R  +  A      M   G  P      +++    + G     F     M++ G
Sbjct: 766 VINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 825

Query: 460 FLP 462
            LP
Sbjct: 826 LLP 828



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V ++++     +A+ V +A  +  +M    L  S+ATYN L+       N+    +    
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY------NLRHTDIMWDV 222

Query: 560 MLE-KESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             E K SG P +  T   LIDGLC   R  DA+    E   +   P+ ++F AL++G CK
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                 A   F MM + G+ PD++ +  L+   
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGL 315


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/451 (32%), Positives = 231/451 (51%), Gaps = 25/451 (5%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEI 263
           ++ I+G L K KQ   A+ L  +M+  GI  +F  L+ LI      G++    ++L K +
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                 +T+TL  N++M+ L   G + ++ +        + +   G +M          +
Sbjct: 73  KLGYQPDTITL--NTLMKGLCLKGEVKKSLHF------HDKVVAQGFQM----------D 114

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+  ++N L K G+   A+ L R +       NV +YN +IDGLC    + E+Y+L  
Sbjct: 115 HVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM+  G  P   T  ++    C    ++GA +L+ +M ++   P V    +LI  LCK G
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG 234

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EA   L  M +EG  P +V YS  + G   +  V  A ++F  +   G  P+V +YN
Sbjct: 235 NVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYN 294

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I+GLCK +RV EA +L  EM+ K ++P   TYN LI+G CKSG I  A+  ++ M  +
Sbjct: 295 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354

Query: 564 ESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             G P DV+TYT+L+D LC     D A  L+ +M+E+G  P   T+ ALI GLCK  R +
Sbjct: 355 --GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLK 412

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            A   F+ +  KG   D++ +  +IS    E
Sbjct: 413 NAQELFQHLLVKGCCIDVWTYTVMISGLCKE 443



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 238/516 (46%), Gaps = 28/516 (5%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKW 148
           K+M+  G   +  TL  L+  +C+ GQ   + SV  +I+  G+  D    + L+      
Sbjct: 34  KQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLK 93

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GEV K+    +++     +++  ++  L++G  K      A++L   +       +  MY
Sbjct: 94  GEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMY 153

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIW 264
           + II GLCK+K +  A  LYSEM   GI PD    + LI      G+L    +LL + I 
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMIL 213

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
             +++N    + N ++  L   G++ +A NLL  M K                  + P  
Sbjct: 214 --KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE----------------GIKPGV 255

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +++     G++  A  +F  M Q+G   NV+ YN +I+GLC   R++E+  LLRE
Sbjct: 256 VTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 315

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M      P   T NS+   LC+   +  ALNL+ +M  +G    V   T L+  LCK+  
Sbjct: 316 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 375

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A      M + G  P +  Y+A I GL    R+  A ELF+ +   GCC DV  Y +
Sbjct: 376 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 435

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +ISGLCK     EA  + ++M   G IP+  T+ ++I    +    D+A   L  M+ K 
Sbjct: 436 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK- 494

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                ++     +  + +    D A  L +EM  KG
Sbjct: 495 ----GLLVLDFKVADVFVQNENDKAEKLLHEMIAKG 526



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 3/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F+ I+ +L K  +   A+SL ++M   G   N    N LI+  C+  ++  S+ 
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKEL 439
           +L ++ + G++P   TLN++ + LC + +V  +L+   K+  QG +   V + TLL   L
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL-NGL 125

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +      P++V Y+  I GL   K V+ A +L+ ++ A G  PD 
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y  +I G C   ++  A  L +EMI K + P V  YN+LIN  CK GN+ +A   L+ 
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAV 245

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M  KE   P V+TY+TL+DG C+ G   +A  +++ M + G  PN  ++  +I GLCKC 
Sbjct: 246 M-TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 304

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A+   R M  K M PD   + +LI           A  ++ EM
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 236/529 (44%), Gaps = 50/529 (9%)

Query: 38  RCLGSVGLVEE---ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           + LGS+  +++   A  L  Q++ +G+   N  + N L+   C    +      L ++  
Sbjct: 15  KILGSLAKMKQYLTAISLSKQMEVKGI-RANFVTLNILINCFCHLGQMAFSFSVLGKILK 73

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G+  D  TL  L++  C  G+  K+L   ++++  G+  +HV +  LL    K GE   
Sbjct: 74  LGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRC 133

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+  ++D + R N   +  +I G  K   V++A  L+ +M   G   DA  Y  +I 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G C   QL  A  L  EM    I P   I + LI +   EG     VKE      V T  
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN----VKEAKNLLAVMTK- 248

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                I   +V+  ++   Y L+  +   + I    V+M       V+PN  S++I+IN 
Sbjct: 249 ---EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM------GVNPNVYSYNIMING 299

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K  ++D A++L REM     + +   YN+LIDGLC S R+  +  L+ EM   G    
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T  S+   LC+ Q++  A  L  KM+ +G +P +   T LI  LCK G+   A     
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC--- 510
            ++ +G   D+  Y+  I GL      D AL +   +  +GC P+ V + III  L    
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479

Query: 511 ---KAQRVA-------------------------EAEDLFNEMITKGLI 531
              KA+++                          +AE L +EMI KGL+
Sbjct: 480 ENDKAEKLLHEMIAKGLLVLDFKVADVFVQNENDKAEKLLHEMIAKGLL 528



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 1/242 (0%)

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           H P +     ++  L K  + + A      M  +G   + V  +  I     + ++  + 
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +   I   G  PD +  N ++ GLC    V ++    ++++ +G      +Y  L+NG 
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G    A+  L RM+E  S  P+V+ Y T+IDGLC     ++A  L++EM+ +G  P+
Sbjct: 126 CKIGETRCAVKLL-RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            IT+  LI G C   +   A      M  K + P ++++  LI+A   E N   A  +L 
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLA 244

Query: 665 EM 666
            M
Sbjct: 245 VM 246


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 260/555 (46%), Gaps = 22/555 (3%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F  ++    +   V F+ LL A +K  + D    L E+M    I     T+ 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL L  KM K G+         ++ G C  K++  A+ L  +M   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G  PD    + LI      +   E   LV  + + R      +    ++  L   G  D 
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A NLL  M   +  ADV +                F+ II++L K   +D AL+LF+EM 
Sbjct: 244 ALNLLNKMEAAKIEADVVI----------------FNTIIDSLCKYRHVDDALNLFKEME 287

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   NV  Y++LI  LC+  R  ++ +LL +M E    P   T N++     +    V
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   M  +  +P +     L+   C H +  +A +    MV +   PD+V Y+  I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    KRV+   ELFR++   G   D V Y  +I GL        A+ +F +M++ G+ 
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + TY++L++G C +G +++A+     M +K     D+  YTT+I+G+C AG+ DD   
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+  +  KG  PN +T+  +I+GLC     + A    + MKE G  P+   +  LI A L
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586

Query: 652 SELNPPLAFEVLKEM 666
            + +   + E+++EM
Sbjct: 587 RDGDKAASAELIREM 601



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 50/422 (11%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+R  + +  +D A  L   M+K  P+                P+   F+ +++ + K  
Sbjct: 56  ILRNGLHDMKLDDAIGLFGGMVKSRPL----------------PSIVEFNKLLSAIAKMK 99

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D+ +SL  +M ++  +  ++ YN LI+  C  +++  +  LL +M + G++P+  TL+
Sbjct: 100 KFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C  + +  A+ LV +M   G+ P     T LI  L  H KA EA   +  MVQ 
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P++V Y   + GL      DLAL L   + A     DVV +N II  LCK + V +A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE-------------- 564
            +LF EM TKG+ P+V TY+ LI+  C  G    A   LS M+EK+              
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339

Query: 565 --------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                               S  PD+ TY +L++G C+  R D A  ++  M  K C P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T+  LI G CK  R       FR M  +G+  D   +  LI     + +   A +V K
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459

Query: 665 EM 666
           +M
Sbjct: 460 QM 461



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 227/528 (42%), Gaps = 57/528 (10%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           Y+YN L+   C+   + L    L +M   G+     TL+ LL  YC+  +   A+++ ++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +++ G+  D   F+ L+       +  +A  L++RM     + N  T+ V+++G  K+  
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
            D AL L +KM  +   +D  +++ II  LCK + ++ AL L+ EM+  GI P+    S 
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 246 LITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           LI+     G   + + L+ ++ E + +N   +  N+++   V  G   +A  L   MIK 
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                           ++ P+  +++ ++N      +LD A  +F  M    C  +V  Y
Sbjct: 360 ----------------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI G C S R+E+  EL REM   G      T  ++ + L    D   A  + ++M  
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463

Query: 423 QGHEPWVKHNTLL-----------------------------------IKELCKHGKAME 447
            G  P +   ++L                                   I+ +CK GK  +
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            +     +  +G  P++V Y+  I GL   + +  A  L + +   G  P+   YN +I 
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              +    A + +L  EM +   +   +T  L+ N     G +D++ L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN-MLHDGRLDKSFL 630



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 4/353 (1%)

Query: 301 KGEP-IADVGVEML-MIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           KG P IA   +++  M + G   S  +  +  I+   L D KLD A+ LF  M +   + 
Sbjct: 24  KGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP 83

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           ++  +N L+  +    + +    L  +M+        +T N +  C CRR  +  AL L+
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM   G+EP +   + L+   C   +  +A   +  MV+ G+ PD + ++  I GL   
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +   A+ L   +   GC P++V Y ++++GLCK      A +L N+M    +   V  +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N +I+  CK  ++D A L L + +E +   P+V+TY++LI  LC  GR  DA  L ++M 
Sbjct: 264 NTIIDSLCKYRHVDDA-LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           EK   PN +TF ALI    K  +   A   +  M ++ + PD+F + +L++ F
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 194/432 (44%), Gaps = 31/432 (7%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
            EA  L D++ + G C PN  +Y  ++  LCK    DL    L +M+      D      
Sbjct: 207 SEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++   C     D AL++F E+   G     V +S L+     +G    A +L+  M +  
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI  FVK+ +  +A +L+D M K     D   Y+ ++ G C + +L+ A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           Q++  M      PD    + LI        +   T L +E+   R +   T+   ++++ 
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQG 444

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +G  D A  + + M+                   V P+  ++ I+++ L  +GKL+ 
Sbjct: 445 LFHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLEK 488

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +F  M +     ++++Y  +I+G+C + ++++ ++L   +   G KP   T N+M  
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKA--------MEAFRFLT 453
            LC ++ +  A  L++KM+  G  P    +NTL+   L    KA        M + RF+ 
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608

Query: 454 DMVQEGFLPDIV 465
           D    G + +++
Sbjct: 609 DASTIGLVANML 620


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 260/555 (46%), Gaps = 22/555 (3%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F  ++    +   V F+ LL A +K  + D    L E+M    I     T+ 
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F ++S++  AL L  KM K G+         ++ G C  K++  A+ L  +M   
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G  PD    + LI      +   E   LV  + + R      +    ++  L   G  D 
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A NLL  M   +  ADV +                F+ II++L K   +D AL+LF+EM 
Sbjct: 206 ALNLLNKMEAAKIEADVVI----------------FNTIIDSLCKYRHVDDALNLFKEME 249

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   NV  Y++LI  LC+  R  ++ +LL +M E    P   T N++     +    V
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   M  +  +P +     L+   C H +  +A +    MV +   PD+V Y+  I
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    KRV+   ELFR++   G   D V Y  +I GL        A+ +F +M++ G+ 
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + TY++L++G C +G +++A+     M +K     D+  YTT+I+G+C AG+ DD   
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+  +  KG  PN +T+  +I+GLC     + A    + MKE G  P+   +  LI A L
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 652 SELNPPLAFEVLKEM 666
            + +   + E+++EM
Sbjct: 549 RDGDKAASAELIREM 563



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 50/422 (11%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+R  + +  +D A  L   M+K  P+                P+   F+ +++ + K  
Sbjct: 18  ILRNGLHDMKLDDAIGLFGGMVKSRPL----------------PSIVEFNKLLSAIAKMK 61

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D+ +SL  +M ++  +  ++ YN LI+  C  +++  +  LL +M + G++P+  TL+
Sbjct: 62  KFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 121

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C  + +  A+ LV +M   G+ P     T LI  L  H KA EA   +  MVQ 
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P++V Y   + GL      DLAL L   + A     DVV +N II  LCK + V +A
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 241

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE-------------- 564
            +LF EM TKG+ P+V TY+ LI+  C  G    A   LS M+EK+              
Sbjct: 242 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 301

Query: 565 --------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                               S  PD+ TY +L++G C+  R D A  ++  M  K C P+
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T+  LI G CK  R       FR M  +G+  D   +  LI     + +   A +V K
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421

Query: 665 EM 666
           +M
Sbjct: 422 QM 423



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 227/528 (42%), Gaps = 57/528 (10%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           Y+YN L+   C+   + L    L +M   G+     TL+ LL  YC+  +   A+++ ++
Sbjct: 83  YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +++ G+  D   F+ L+       +  +A  L++RM     + N  T+ V+++G  K+  
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
            D AL L +KM  +   +D  +++ II  LCK + ++ AL L+ EM+  GI P+    S 
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 246 LITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           LI+     G   + + L+ ++ E + +N   +  N+++   V  G   +A  L   MIK 
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                           ++ P+  +++ ++N      +LD A  +F  M    C  +V  Y
Sbjct: 322 ----------------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI G C S R+E+  EL REM   G      T  ++ + L    D   A  + ++M  
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425

Query: 423 QGHEPWVKHNTLL-----------------------------------IKELCKHGKAME 447
            G  P +   ++L                                   I+ +CK GK  +
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            +     +  +G  P++V Y+  I GL   + +  A  L + +   G  P+   YN +I 
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              +    A + +L  EM +   +   +T  L+ N     G +D++ L
Sbjct: 546 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN-MLHDGRLDKSFL 592



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 164/330 (49%), Gaps = 1/330 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           S  +  +  I+   L D KLD A+ LF  M +   + ++  +N L+  +    + +    
Sbjct: 9   SSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS 68

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  +M+        +T N +  C CRR  +  AL L+ KM   G+EP +   + L+   C
Sbjct: 69  LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 128

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
              +  +A   +  MV+ G+ PD + ++  I GL    +   A+ L   +   GC P++V
Sbjct: 129 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 188

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y ++++GLCK      A +L N+M    +   V  +N +I+  CK  ++D A L L + 
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA-LNLFKE 247

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +E +   P+V+TY++LI  LC  GR  DA  L ++M EK   PN +TF ALI    K  +
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              A   +  M ++ + PD+F + +L++ F
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 337



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 194/432 (44%), Gaps = 31/432 (7%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
            EA  L D++ + G C PN  +Y  ++  LCK    DL    L +M+      D      
Sbjct: 169 SEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++   C     D AL++F E+   G     V +S L+     +G    A +L+  M +  
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI  FVK+ +  +A +L+D M K     D   Y+ ++ G C + +L+ A 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           Q++  M      PD    + LI        +   T L +E+   R +   T+   ++++ 
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQG 406

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +G  D A  + + M+                   V P+  ++ I+++ L  +GKL+ 
Sbjct: 407 LFHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLEK 450

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +F  M +     ++++Y  +I+G+C + ++++ ++L   +   G KP   T N+M  
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKA--------MEAFRFLT 453
            LC ++ +  A  L++KM+  G  P    +NTL+   L    KA        M + RF+ 
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 570

Query: 454 DMVQEGFLPDIV 465
           D    G + +++
Sbjct: 571 DASTIGLVANML 582


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 289/669 (43%), Gaps = 66/669 (9%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           +R  +SP    F +R L    + E    ++ Q+ ++GL +P+  +YN ++++ CK   + 
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGL-LPDTVTYNTMIKSYCKEGDLT 200

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILL 142
                 + + + G   + +T   L+  YC +G+  KA  +F  +   G   +E+ ++IL+
Sbjct: 201 TAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 260

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
                   V KA  L   M       N + F  LI G  K  RV  A  LFD M ++G  
Sbjct: 261 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVV 320

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE------L 256
                Y+ +I G  K  ++  AL++   M+ +G  PD    + LI    D+        L
Sbjct: 321 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL 380

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIM------------RILVSNGSID-QAY-NLLQAMIKG 302
              VKE +    V    L+    M            +++ S   +D Q +  L+ ++IK 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           + + +    +  I    + PN  ++  II+   K GK+D+AL + + M + GC  N + Y
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+L+ GL    +L ++  LL +M++ G  P   T  ++ +  C   D   A  L   M  
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G +P      +L   LCK G+A EA+ F+   V++G     V Y+  I G       D 
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE------------------------- 517
           A  L   +   GC PD   Y++++  LCK +R+ E                         
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 518 ----------AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
                     A+ ++NEM + G  PS  TY + IN +CK G ++ A   + +M E+E  +
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVA 736

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+TY  LIDG    G  D A      M    C PN  T+  L+  L K       L +
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-----GNLAY 791

Query: 628 FRMMKEKGM 636
            R +   GM
Sbjct: 792 VRSVDTSGM 800



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/633 (25%), Positives = 280/633 (44%), Gaps = 41/633 (6%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L ++ R+   R+L   + ++    S      +I     +G + +A  + + +++ G C
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG-C 354

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P++++YN L+  LC   + +  E+ L      G+     T T L+  YC + +FD AL 
Sbjct: 355 HPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + N+++     +D  VF  L+ +  K   + +A EL+  +    +  N  T+  +I G+ 
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +VD AL++   M + G   +A  Y+ ++ GL K+K+L  A+ L ++M+  GI P+  
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533

Query: 242 ILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + L+    DE +      + E+ E   +         +   L   G  ++AY+     
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---- 589

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I   GV +  ++          +  +I+   K G  D A +L   M   GC  + 
Sbjct: 590 -----IVRKGVALTKVY----------YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + Y+ L+  LC   RL E+  +L +M   G K T F    +   + R      A  +  +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   GH+P     T+ I   CK G+  +A   +  M +EG  PD+V Y+  I G   +  
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ----RVAEAEDLFN------------ 523
           +D A    + +    C P+   Y +++  L K      R  +   ++N            
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+  GL P+V TY+ LI G+CK+G +++A L L  M  K   SP+   YT LI   C  
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK-GLSPNEDIYTLLIKCCCDT 873

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
              + A+   + M E G  P   ++  L+ GLC
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 246/577 (42%), Gaps = 84/577 (14%)

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V+++++  G + + V ++ ++ ++ K G++  A      + +  +     T   L+ G+ 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   + KA  LF  M   G   +   Y ++I GLC  K +  AL L+  MK  G +P+  
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI+                          LC S        G +  A  L  AM +
Sbjct: 290 AFTFLISG-------------------------LCKS--------GRVGDARLLFDAMPQ 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             V P+  +++ +I    K G+++ AL +   M + GC  + + 
Sbjct: 317 N----------------GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI GLC+  + EE+ ELL    + GF PT  T  ++    C  +    AL +  KM 
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               +  ++    LI  L K  +  EA   L ++   G +P+++ Y++ I G     +VD
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 479

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +ALE+ + +   GC P+   YN ++ GL K +++ +A  L  +M   G+IP+V TY  L+
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPD-----VIT------------------------ 572
            G C   + D A   L  M+E+    PD     V+T                        
Sbjct: 540 QGQCDEHDFDNAFR-LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT 598

Query: 573 ---YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
              YTTLIDG   AG  D A  L   M ++GC P+  T+  L+  LCK  R   AL    
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M  +G+K  +F +  LI   L E     A  +  EM
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 221/498 (44%), Gaps = 53/498 (10%)

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A + I R     + L+ K +   +    +    +   +++ ++ + G   D   Y+ +I 
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             CK   L  A + +  +   G+ P+    + L+      GEL    K  W         
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELR---KACWL-------- 240

Query: 274 LLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                +M  L+     + +Y  L+Q +   + +    V  LM+ +   SPN  +F  +I+
Sbjct: 241 ----FLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++  A  LF  M Q G + +V  YN +I G     R+ ++ ++   ME++G  P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N++   LC +                                    K  EA   L
Sbjct: 357 DDWTYNTLIYGLCDQ------------------------------------KTEEAEELL 380

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            + V+EGF P +V ++  I G    ++ D AL +   + +  C  D+  +  +I+ L K 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA++L NE+   GL+P+V TY  +I+G+CKSG +D A+  L +M+E++   P+  T
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWT 499

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y +L+ GL    +   A+ L  +M++ G  PN IT+  L+ G C       A   F MM+
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 633 EKGMKPDMFVFVALISAF 650
           + G+KPD   +  L  A 
Sbjct: 560 QNGLKPDEHAYAVLTDAL 577



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 238/599 (39%), Gaps = 105/599 (17%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +   ++ S+C +     G LI  L     ++EA  L +++   GL VPN  +Y  +++  
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGL-VPNVITYTSIIDGY 472

Query: 77  CKSCSVDLVEMRLKEMQDYG-----WGYDKY----------------------------- 102
           CKS  VD+    LK M+  G     W Y+                               
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 103 -TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
            T T LLQ  C+   FD A  +F  +  +G   DEH +++L  A  K G  ++A   I R
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
                + L +  +  LI GF K    D A  L ++M   G   D+  Y V++  LCK K+
Sbjct: 593 K---GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           L  AL +  +M   GI             C+                 +   T+L + ++
Sbjct: 650 LNEALPILDQMSLRGI------------KCT-----------------IFAYTILIDEML 680

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R     G  D A  +   M                      P+ +++ + IN+  K+G+L
Sbjct: 681 R----EGKHDHAKRMYNEMTSSGH----------------KPSATTYTVFINSYCKEGRL 720

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A  L  +M + G   +V  YN LIDG  +   ++ ++  L+ M  +  +P ++T   +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 401 FRCL-------CRRQDVVGALNLVR---------KMRVQGHEPWVKHNTLLIKELCKHGK 444
            + L        R  D  G  NL+          +M   G  P V   + LI   CK G+
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L  M  +G  P+   Y+  I    D K  + AL     +   G  P + +Y +
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           ++ GLC      + + LF +++  G       + +L +G  K+G +D     LS M ++
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 147/305 (48%), Gaps = 2/305 (0%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN  +  L   +  E    +  ++ + G  P   T N+M +  C+  D+  A    R + 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G EP       L+   C+ G+  +A      M   G   +   Y+  I GL D K V 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL LF  +   GC P+V A+  +ISGLCK+ RV +A  LF+ M   G++PSV TYN +I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            G+ K G ++ A L +  ++EK    PD  TY TLI GLC   + ++A  L N   ++G 
Sbjct: 331 VGYSKLGRMNDA-LKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGF 388

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  +TF  LI G C  ++   AL     M     K D+ VF  LI++ + +     A E
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 662 VLKEM 666
           +L E+
Sbjct: 449 LLNEI 453



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 3/202 (1%)

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           CY+ A+  L      +    ++  +   G  PD V YN +I   CK   +  A   F  +
Sbjct: 150 CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL 209

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  GL P   T N L+ G+C++G + +A   L  M+       +  +YT LI GLC A  
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACW-LFLMMPLMGCQRNEYSYTILIQGLCDAKC 268

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A++L+  M+  GC+PN   F  LI+GLCK  R   A + F  M + G+ P +  + A
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 646 LISAF--LSELNPPLAFEVLKE 665
           +I  +  L  +N  L  + L E
Sbjct: 329 MIVGYSKLGRMNDALKIKELME 350


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 163/623 (26%), Positives = 293/623 (47%), Gaps = 22/623 (3%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
            A +L  +++++ L  P+  +YN L+    +   ++        M          T T +
Sbjct: 313 RAFLLLKRMRKDDL-TPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTM 371

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  YC + + DKALS+ +E+   G +  E  +S LL  + K   +  A  L+E +    I
Sbjct: 372 IDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGI 431

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            +N+    +LI GF +   + KA Q+   M + G   D   Y  +I G+C+  ++    +
Sbjct: 432 TINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKE 491

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILV 284
           + S M+ SGI P+  + + LI      G +   +K   +   R +    ++ N+++    
Sbjct: 492 ILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFY 551

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G I +A +  Q M                 +  +S ++ SF+ II++    G +  A 
Sbjct: 552 REGMITEAEHFRQYM----------------SRMNISFDSVSFNRIIDSYCHRGNIVGAF 595

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           S++ +M + G   NV  Y NL+ GLC    L ++ + +  + +  F     T N++   +
Sbjct: 596 SVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGI 655

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           CR   +  AL+L  KM      P +   T+L+   C+ GK + A   L  M+++G +PD 
Sbjct: 656 CRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDT 715

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           V Y+  + GLI+  +V  A  +F +I C  G   D +AYN +++G  K++ V   + + +
Sbjct: 716 VAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMS 775

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +M    + P+ A+YN+L++G+ K G   ++ L L + + ++   PD +TY  LI GL   
Sbjct: 776 DMYQNEVYPNSASYNILMHGYVKRGQFSKS-LYLYKYMVRKGIRPDNVTYRLLILGLSEC 834

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D A+    +M  +G  P+R+ F  LIT   +  +   AL  F  MK   M P    F
Sbjct: 835 GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTF 894

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            A+I+  + +     + +VL EM
Sbjct: 895 SAMINGLIRKGYLDHSHKVLHEM 917



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/599 (25%), Positives = 276/599 (46%), Gaps = 22/599 (3%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G V+EA   F  + R GL V N   +N LL A  +   +   E   + M      +D  +
Sbjct: 519  GYVKEALKHFVDIYRRGL-VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVS 577

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
               ++  YC+ G    A SV+++++ +G+      +  LL    + G + +A + +  + 
Sbjct: 578  FNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL 637

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            D    ++EKTF  L+ G  +   +D+AL L +KM K+    D   Y +++ G C+  ++ 
Sbjct: 638  DIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKIL 697

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
             AL +   M   G+ PD    + L+    +EG++   + +  EI     +    +  NS+
Sbjct: 698  PALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSL 757

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            M   + + +++    ++  M + E                V PN++S++I+++  +K G+
Sbjct: 758  MNGYLKSRNVNTIKRMMSDMYQNE----------------VYPNSASYNILMHGYVKRGQ 801

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               +L L++ M + G   +   Y  LI GL     ++ + + L +M   G  P     + 
Sbjct: 802  FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDI 861

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            +      +  +  AL +   M+     P  K  + +I  L + G    + + L +M+Q G
Sbjct: 862  LITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG 921

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              P+   Y A +     +  +D A  L  ++ A G  P  VA + II GLC+  ++ EA 
Sbjct: 922  LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAV 981

Query: 520  DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             +F+ M+  G++P+VAT+  L++  CK   I  A L L R++E      DV++Y  LI G
Sbjct: 982  IVFSSMMRSGMVPTVATFTTLMHSLCKESKIADA-LHLKRLMELCRLRVDVVSYNVLITG 1040

Query: 580  LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC      DA+ L+ EM+ KG  PN  T++ L   +    R +        ++E+G+ P
Sbjct: 1041 LCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 272/603 (45%), Gaps = 29/603 (4%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-I 128
           N LL +LC +      E  L++M+      +  T   +L  Y   G+F  AL V  ++  
Sbjct: 230 NILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMER 288

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           D    D + ++I++    +     +A  L++RM   ++  +E T+  LI+GF ++ +++ 
Sbjct: 289 DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINH 348

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  +F+ M +       A Y  +I G C+N++++ AL + SEM+ +G+ P     S L+ 
Sbjct: 349 ARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLN 408

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-----SIDQAYNLLQAMIKGE 303
                 ++++L   I+   D+ +  +  N  MR ++ +G      I +A  +L++M +  
Sbjct: 409 GYC---KVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 304 PIADVGVEMLMIF-------------------KGTVSPNTSSFDIIINTLLKDGKLDLAL 344
              DV     +I                    K  + PN   +  +I    K G +  AL
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
             F ++ + G + N  ++N L+        + E+    + M          + N +    
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSY 585

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C R ++VGA ++   M   G+ P V     L++ LC+ G  ++A +F++ ++   F  D 
Sbjct: 586 CHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDE 645

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             ++A + G+     +D AL+L   +  + C PD+  Y I++SG C+  ++  A  +   
Sbjct: 646 KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ KG++P    Y  L+NG    G +  A      ++ KE    D I Y +L++G   + 
Sbjct: 706 MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSR 765

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             +    + ++M +    PN  ++  L+ G  K  +   +L  ++ M  KG++PD   + 
Sbjct: 766 NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 825

Query: 645 ALI 647
            LI
Sbjct: 826 LLI 828



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/668 (22%), Positives = 291/668 (43%), Gaps = 60/668 (8%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G +  A  +F+ + R+ L VP+  +Y  +++  C++  +D     L EMQ  G    + T
Sbjct: 344  GKINHARYVFNHMLRQNL-VPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELT 402

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
             + LL  YC       A+ +  ++   G  +++ + +IL+  F + GE+ KA ++++ M 
Sbjct: 403  YSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMF 462

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            +  I  +  T+  LI+G  + +++ +  ++  +M KSG   +  +Y  +I   CK   ++
Sbjct: 463  EDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVK 522

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIM 280
             AL+ + ++   G+  +  I + L+ +   EG +T     ++     +++  ++  N I+
Sbjct: 523  EALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRII 582

Query: 281  RILVSNGSIDQAY-------------------NLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                  G+I  A+                   NLL+ + +G  +      M  +     +
Sbjct: 583  DSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFA 642

Query: 322  PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
             +  +F+ ++  + + G LD AL L  +M +  C+ ++  Y  L+ G C   ++  +  +
Sbjct: 643  IDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVI 702

Query: 382  LREMEESGFKPTHFTLNSMFRCLCRRQDVVGA---------------------------- 413
            L+ M E G  P       +   L     V  A                            
Sbjct: 703  LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYL 762

Query: 414  ----LNLVRKMRVQGHEPWVKHNT----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                +N +++M    ++  V  N+    +L+    K G+  ++      MV++G  PD V
Sbjct: 763  KSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 822

Query: 466  CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             Y   I GL +   +D+A++    +   G  PD + ++I+I+   +  ++  A  +FN M
Sbjct: 823  TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCM 882

Query: 526  ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
                + PS  T++ +ING  + G +D +   L  ML+     P+   Y  L++  C  G 
Sbjct: 883  KWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQ-VGLQPNHTHYIALVNAKCRVGE 941

Query: 586  PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             D A  L  EM+  G  P  +   ++I GLC+C +   A++ F  M   GM P +  F  
Sbjct: 942  IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTT 1001

Query: 646  LISAFLSE 653
            L+ +   E
Sbjct: 1002 LMHSLCKE 1009



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 246/537 (45%), Gaps = 34/537 (6%)

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           +ILL +    GE  KA +++++M  C+I  N  T+  ++H +VKK R   AL + + M +
Sbjct: 230 NILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMER 288

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT- 257
               +D   Y+++I  LC+ K+   A  L   M+   +TPD    + LI     EG++  
Sbjct: 289 DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINH 348

Query: 258 -------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVG 309
                  +L + +     V T T + +   R    N  ID+A ++L  M I G       
Sbjct: 349 ARYVFNHMLRQNLVPS--VATYTTMIDGYCR----NRRIDKALSILSEMQITG------- 395

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                     V P+  ++  ++N   K   L  A+ L  ++   G   N  +   LIDG 
Sbjct: 396 ----------VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGF 445

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C    + ++ ++L+ M E G  P   T +++   +CR   +     ++ +M+  G  P  
Sbjct: 446 CQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPND 505

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              T LI   CK G   EA +   D+ + G + + V ++A +        +  A    + 
Sbjct: 506 VLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQY 565

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +       D V++N II   C    +  A  ++++M+  G  P+V TY  L+ G C+ G+
Sbjct: 566 MSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGH 625

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           + QA   +S +L+    + D  T+  L+ G+C  G  D+A+ L  +M +  C P+  T+ 
Sbjct: 626 LVQARQFMSCLLDIPF-AIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYT 684

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L++G C+  +   ALV  +MM EKG+ PD   +  L++  ++E     A  V  E+
Sbjct: 685 ILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI 741



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 158/664 (23%), Positives = 293/664 (44%), Gaps = 30/664 (4%)

Query: 11   IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
            + P   L +D+      ++      LI     VG + +A  +   +  +G+  P+  +Y+
Sbjct: 416  LGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGI-DPDVITYS 474

Query: 71   CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
             L+  +C+   +   +  L  MQ  G   +    T L+  YC +G   +AL  F +I   
Sbjct: 475  ALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRR 534

Query: 131  GWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            G V   V  + LL AF + G + +A    + M   NI  +  +F  +I  +  +  +  A
Sbjct: 535  GLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGA 594

Query: 190  LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
              ++D M + G++ +   Y  ++ GLC+   L  A Q  S +       D +  + L+  
Sbjct: 595  FSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLG 654

Query: 250  CSDEGELT----LLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                G L     L  K I  +   D++T T+L +   R     G I  A  +LQ M++  
Sbjct: 655  ICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCR----KGKILPALVILQMMLE-- 708

Query: 304  PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFLY 362
                         KG V P+T ++  ++N L+ +G++  A  +F E+  + G   +   Y
Sbjct: 709  -------------KGVV-PDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAY 754

Query: 363  NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
            N+L++G   S  +     ++ +M ++   P   + N +     +R     +L L + M  
Sbjct: 755  NSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 814

Query: 423  QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            +G  P      LLI  L + G    A +FL  MV EG  PD + +   I    +  ++  
Sbjct: 815  KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 874

Query: 483  ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            AL++F  +      P    ++ +I+GL +   +  +  + +EM+  GL P+   Y  L+N
Sbjct: 875  ALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVN 934

Query: 543  GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              C+ G ID+A   L   ++     P  +  +++I GLC  G+ ++A+++++ M   G  
Sbjct: 935  AKCRVGEIDRAFR-LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMV 993

Query: 603  PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            P   TF  L+  LCK  +   AL   R+M+   ++ D+  +  LI+    + +   A ++
Sbjct: 994  PTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDL 1053

Query: 663  LKEM 666
              EM
Sbjct: 1054 YGEM 1057



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 64/534 (11%)

Query: 14   LRVLAQ--DVVKSRCFMS-----PGAL-----GFLIRCLGSVGLVEEANMLFDQVKREGL 61
            LR L Q   +V++R FMS     P A+       L+  +   G ++EA  L +++ +   
Sbjct: 617  LRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN- 675

Query: 62   CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            C+P+ ++Y  LL   C+   +    + L+ M + G   D    T LL    N GQ   A 
Sbjct: 676  CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735

Query: 122  SVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             VF+EII  +  + D   ++ L+  + K   V+    ++  M    +  N  ++ +L+HG
Sbjct: 736  YVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHG 795

Query: 180  FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            +VK+ +  K+L L+  M + G   D   Y ++I GL +   +++A++   +M   GI PD
Sbjct: 796  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 855

Query: 240  FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
              +   LIT+ S++ ++                    N++           Q +N ++ +
Sbjct: 856  RLVFDILITAFSEKSKMH-------------------NAL-----------QVFNCMKWL 885

Query: 300  IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                                +SP++ +F  +IN L++ G LD +  +  EM Q+G   N 
Sbjct: 886  -------------------HMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNH 926

Query: 360  FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              Y  L++  C    ++ ++ L  EM+  G  P     +S+ R LCR   +  A+ +   
Sbjct: 927  THYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSS 986

Query: 420  MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            M   G  P V   T L+  LCK  K  +A      M       D+V Y+  I GL   K 
Sbjct: 987  MMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKH 1046

Query: 480  VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +  AL+L+ ++ + G  P++  Y  +   +    RV   E+L  ++  +GLIP+
Sbjct: 1047 ISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 9/325 (2%)

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           SL R +++     +V ++  L+       ++ ++   +  M++ GFK +  + N++   L
Sbjct: 143 SLLRTISRFDPTNHV-VFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNAL 201

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG---FL 461
               +       +R+   +     V    +L+  LC +G+    FR   DM+Q+     +
Sbjct: 202 VEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGE----FRKAEDMLQKMKSCHI 257

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            + V Y+  +   +   R   AL +  D+       DV  YNI+I  LC+ +R   A  L
Sbjct: 258 SNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLL 317

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
              M    L P   TYN LING+ + G I+ A    + ML +++  P V TYTT+IDG C
Sbjct: 318 LKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHML-RQNLVPSVATYTTMIDGYC 376

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
              R D A+ + +EM+  G  P+ +T+ AL+ G CK      A+     +K +G+  +  
Sbjct: 377 RNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
           +   LI  F        A ++LK M
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSM 461



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 202/438 (46%), Gaps = 27/438 (6%)

Query: 7    RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVK-REGLCVPN 65
            R  +I P  V+ Q +++        A   L+  L + G V+ A+ +F ++  +EGL   +
Sbjct: 692  RKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGL-YAD 750

Query: 66   NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
              +YN L+    KS +V+ ++  + +M       +  +   L+  Y   GQF K+L ++ 
Sbjct: 751  CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 810

Query: 126  EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             ++  G   ++V + +L++  S+ G +D A + +E+M    I  +   F +LI  F +KS
Sbjct: 811  YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS 870

Query: 185  RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++  ALQ+F+ M     +  +  +  +I GL +   L+ + ++  EM   G+ P+     
Sbjct: 871  KMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYI 930

Query: 245  KLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY--------- 293
             L+ +    GE+     +KE  +   +    +  +SI+R L   G +++A          
Sbjct: 931  ALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRS 990

Query: 294  ----------NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                       L+ ++ K   IAD      ++    +  +  S++++I  L KD  +  A
Sbjct: 991  GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDA 1050

Query: 344  LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            L L+ EM   G   N+  Y  L   + ++ R++   ELL ++EE G  P +    ++ R 
Sbjct: 1051 LDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAYKQPENLER- 1109

Query: 404  LCRRQDVVGALNLVRKMR 421
              R +D +  LN++R  R
Sbjct: 1110 --RMEDAIIRLNMIRNCR 1125


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 255/533 (47%), Gaps = 24/533 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIE-RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++I+L +  + GE  +A E+    M    +     T+  +I+G  K + +   ++LF+++
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K G   D   Y+ +I  LCK   LE A +L+  M   G  P+    S LI      G  
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 255 -ELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            E   L++E+     DV    +  NS +  L       +A  L++++  G          
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-------- 219

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                  VSP+T +F  +I+ L K G+ D A +   +M   G + NV  YN L++GLC +
Sbjct: 220 ------RVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKA 271

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           +++E ++ ++  M + G  P   T + +    C+   V  AL L+  M  +G  P V   
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             +I  LCK  ++ EAF+    +     +PD V ++  I G       + A  LF ++ A
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               PDV+ +  +I GLCKA +V  A D+ + M   G+ P+V TYN+L++G CKSG I++
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451

Query: 553 AMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
               L  M+   SG  P+ +TY +L+  LC A R DDA+ L ++++  G  P+ +T+  L
Sbjct: 452 PCEFLEEMVS--SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           + GL K  +   A+     M  KG +PD F F A         N     E+L+
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 232/533 (43%), Gaps = 90/533 (16%)

Query: 173 FCVLIHGFVKKSRVDKALQLF-DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           + +++    +     +AL++F  +M + G A     Y+ II GLCK+ +L   ++L+ E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  PD    + LI S                         LC +        G +++
Sbjct: 108 VKRGHHPDVVTYNTLIDS-------------------------LCKA--------GDLEE 134

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L   M                 +G V PN  ++ ++IN L K G++D A  L +EMT
Sbjct: 135 ARRLHGGMSS---------------RGCV-PNVVTYSVLINGLCKVGRIDEARELIQEMT 178

Query: 352 QIGC--MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK--PTHFTLNSMFRCLCRR 407
           +  C  + N+  YN+ +DGLC  +   E+ EL+R + +   +  P   T +++   LC+ 
Sbjct: 179 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 238

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                A N    M   G+ P V     L+  LCK  K   A   +  MV +G  PD++ Y
Sbjct: 239 GQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 296

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  +       RVD ALEL   + + GC P+VV +N II GLCK+ R  EA  +  ++  
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK-----------------ESGS--- 567
           + L+P   T+N+LI G CK+GN +QA      M+ K                 ++G    
Sbjct: 357 RMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA 416

Query: 568 --------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                         P+V+TY  L+ GLC +GR ++      EM   GC P  +T+ +L+ 
Sbjct: 417 ARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVY 476

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LC+  R   AL     +K  G  PD   +  L+           A  VL+EM
Sbjct: 477 ALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 529



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 220/453 (48%), Gaps = 28/453 (6%)

Query: 206 AMYDVIIGGLCKNKQLEMALQLY-SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A Y++++  LC+  +   AL+++  EM   G+ P     + +I       EL   + E++
Sbjct: 46  ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM-ELF 104

Query: 265 ED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E+   R  +   +  N+++  L   G +++A  L   M                 +G V 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSS---------------RGCV- 148

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC--MQNVFLYNNLIDGLCNSNRLEESY 379
           PN  ++ ++IN L K G++D A  L +EMT+  C  + N+  YN+ +DGLC  +   E+ 
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 208

Query: 380 ELLREMEESGFK--PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           EL+R + +   +  P   T +++   LC+      A N    M   G+ P V     L+ 
Sbjct: 209 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVN 266

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK  K   A   +  MV +G  PD++ YS  +       RVD ALEL   + + GC P
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +VV +N II GLCK+ R  EA  +  ++  + L+P   T+N+LI G CK+GN +QA    
Sbjct: 327 NVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALF 386

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M+ K    PDV+T+  LIDGLC AG+ + A  + + M   G  PN +T+  L+ GLCK
Sbjct: 387 EEMVAKNM-QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             R          M   G  P+   + +L+ A 
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYAL 478



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 189/356 (53%), Gaps = 8/356 (2%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR-EMTQIGCMQNVFLYNNLIDGLCNSNR 374
           F  + S + + ++I++ +L + G+   AL +FR EM + G    +  YN +I+GLC SN 
Sbjct: 37  FVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 96

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L    EL  E+ + G  P   T N++   LC+  D+  A  L   M  +G  P V   ++
Sbjct: 97  LGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSV 156

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEG--FLPDIVCYSAAIGGLIDIKRVDLALELFRDI-- 490
           LI  LCK G+  EA   + +M ++    LP+I+ Y++ + GL        A EL R +  
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            +    PD V ++ +I GLCK  +  EA +  ++MI  G +P+V TYN L+NG CK+  +
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           ++A   +  M++K   +PDVITY+ L+D  C A R D+A+ L + M  +GC PN +TF +
Sbjct: 275 ERAHAMIESMVDK-GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +I GLCK DR   A      +  + + PD   F  LI+      N   A  + +EM
Sbjct: 334 IIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEM 389



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 254/552 (46%), Gaps = 27/552 (4%)

Query: 69  YNCLLEALCKSC-SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           YN +L++LC++  +   +E+   EM   G      T   ++   C S +    + +F E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G   + V ++ L+ +  K G++++A  L   M       N  T+ VLI+G  K  R+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 187 DKALQLFDKMTKSG--FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG--ITPDFEI 242
           D+A +L  +MT+       +   Y+  + GLCK      A +L   ++     ++PD   
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 243 LSKLITSCSDEGELTLLVKE--IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S LI      G+      +  I      N +T   N+++  L     +++A+ ++++M+
Sbjct: 228 FSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTY--NALVNGLCKADKMERAHAMIESMV 285

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG V+P+  ++ ++++   K  ++D AL L   M   GC  NV 
Sbjct: 286 D---------------KG-VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 329

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +N++IDGLC S+R  E++++  ++      P   T N +    C+  +   A  L  +M
Sbjct: 330 TFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEM 389

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +  +P V     LI  LCK G+   A   L  M   G  P++V Y+  + GL    R+
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           +   E   ++ + GC P+ + Y  ++  LC+A R  +A  L +++ + G  P   TYN+L
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++G  KSG  +QA+  L  M+ K    PD  T+     GL  +G     + L   +  KG
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGK-GHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568

Query: 601 CAPNRITFMALI 612
             P+  T  +++
Sbjct: 569 MLPDATTCSSIL 580



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 228/511 (44%), Gaps = 65/511 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV- 63
           L +A  +   R L   +    C  +      LI  L  VG ++EA  L  ++ R+   V 
Sbjct: 126 LCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 185

Query: 64  PNNYSYNCLLEALCK-SCSVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDKA 120
           PN  +YN  L+ LCK S + +  E+ ++ ++D       D  T + L+   C  GQ D+A
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACEL-MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 244

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +  +++I  G+V   V ++ L+    K  ++++A  +IE M D  +  +  T+ VL+  
Sbjct: 245 CN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 302

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ----LEMALQLYSEMKGSG 235
           F K SRVD+AL+L   M   G   +   ++ II GLCK+ +     ++ALQ+Y+ M    
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM---- 358

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD    + LI                            C +        G+ +QA  L
Sbjct: 359 LVPDKVTFNILIAGA-------------------------CKA--------GNFEQASAL 385

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + M+                   + P+  +F  +I+ L K G+++ A  +   M  +G 
Sbjct: 386 FEEMVAKN----------------MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV  YN L+ GLC S R+EE  E L EM  SG  P   T  S+   LCR      AL 
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           LV K++  G +P      +L+  L K GK  +A   L +MV +G  PD   ++A  GGL 
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH 549

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIII 506
               +   +EL R + A G  PD    + I+
Sbjct: 550 RSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 214/495 (43%), Gaps = 32/495 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF+++ + G   P+  +YN L+++LCK+  ++        M   G   +  T + L+   
Sbjct: 103 LFEELVKRGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 112 CNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           C  G+ D+A  +  E+         +   ++  L    K     +ACEL+  + D ++R+
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221

Query: 169 NEKT--FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           +  T  F  LI G  K  + D+A    D M   G+  +   Y+ ++ GLCK  ++E A  
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 227 LYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           +   M   G+TPD    S L+      S  DE  L LL          N +T   NSI+ 
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEA-LELLHGMASRGCTPNVVTF--NSIID 336

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +    +A+ +                 L ++   + P+  +F+I+I    K G  +
Sbjct: 337 GLCKSDRSGEAFQI----------------ALQVYNRMLVPDKVTFNILIAGACKAGNFE 380

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A +LF EM       +V  +  LIDGLC + ++E + ++L  M   G  P   T N + 
Sbjct: 381 QASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   +      + +M   G  P       L+  LC+  +  +A + ++ +   G+ 
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWD 500

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD V Y+  + GL    + + A+ +  ++   G  PD   +     GL ++  +A   +L
Sbjct: 501 PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMEL 560

Query: 522 FNEMITKGLIPSVAT 536
              ++ KG++P   T
Sbjct: 561 LRVVLAKGMLPDATT 575



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 1/118 (0%)

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
            A  NLL+     + N  +  LC  +     S S  V  Y  ++  LC AG    A+ ++
Sbjct: 9   TAAANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIF 68

Query: 594 -NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             EM   G AP  +T+  +I GLCK +   A +  F  + ++G  PD+  +  LI + 
Sbjct: 69  RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSL 126


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 253/548 (46%), Gaps = 25/548 (4%)

Query: 113 NSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           N G+  +     +EI    D G+     F+ LL+   K+  VD A ++  +M +  IR +
Sbjct: 143 NEGEVKRVTQFLSEINSKYDFGYT-LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPS 201

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  +I+   KK RV +A  +   + +     +A  Y  +I G C+N  L++A  ++ 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
            M   G  P+    S LI     EG L   +  + E   + +          +  L   G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +A  LL  M K               +G V PN  +F  +I+ L +DGK ++A+ L+
Sbjct: 322 CSSEAVELLGKMKK---------------RGCV-PNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   G +     YN LI+ LC   R E ++ + + M   G  P+  T N + +C C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            D+  A+ +  KM   G  P V     LI   CK G    A R L  M   G  PD   Y
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G     +++ A  LF  +  HG  P+ V Y  II G     +V +A  LF +M+ 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G +PS  TYN++I+G+ K+ +I +A     +M+ K+   P+VITYT+ IDGLC  GR  
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV-KQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVA 645
            A  +++EME++   PN  T+ +LI GLC+  R   A ++     +   G +P++  +  
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 646 LISAFLSE 653
           L+     E
Sbjct: 665 LVKGLCGE 672



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/646 (25%), Positives = 285/646 (44%), Gaps = 64/646 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQV 110
           + +++ R+ L  P ++    ++++      V  V   L E+   Y +GY   + T LL  
Sbjct: 117 MLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ 176

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
                  D A  ++ ++++ G     + F+ ++    K G V +A  ++  +   +   N
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  LI G  +   +D A  +FD+M K G   ++  Y  +I GLC   +LE A+ +  
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296

Query: 230 EMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           EM   GI P     +  + S  D G      EL   +K+     ++ T T L + + R  
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR-- 354

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             +G  + A               +G+   M+  G V P T +++ +IN L  +G+ + A
Sbjct: 355 --DGKFEIA---------------IGLYHKMLADGLV-PTTVTYNALINQLCVEGRFETA 396

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++F+ M   G + +   YN +I   C    ++++  +  +M ++G  P   T N++   
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C++ ++  A+ L+  M+  G +P     T LI    + GK   A      M++ G  P+
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y+A I G  ++ +VD AL LF  +   G  P    YN++ISG  K   ++EAE+   
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNI--------------------------------- 550
           +M+ +GL+P+V TY   I+G C++G                                   
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 551 ---DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
              D  M  L   L      P+V TYTTL+ GLC  GR  +A  L   M++KG  P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + AL+ G CK  +  +AL  F  M   G +  +  + ALI A   E
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 273/634 (43%), Gaps = 64/634 (10%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P  L F  +I  L   G V+EA ++   + R     PN ++Y  L+   C++ ++DL   
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD-AYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFS 146
               M   G   +  T + L+   C+ G+ ++A+ +  E++  G     + ++I LV+  
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
             G   +A EL+ +M       N +TF  LI G  +  + + A+ L+ KM   G      
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKE 262
            Y+ +I  LC   + E A  ++  M   G  P  +  +++I      G+    + +  K 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +      N +T   N+++      G+++ A  LL+ M KG  +                P
Sbjct: 439 LKAGSSPNVITY--NTLIYGYCKQGNLNNAMRLLEIM-KGNGL---------------KP 480

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  ++  +I+   + GKL+ A SLF  M + G   N   Y  +IDG  N  +++++  L 
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M ESG  P+  T N M     +   +  A N   KM  QG  P V   T  I  LC++
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA--LELFRDICAHGCCPDVV 500
           G+   AF+   +M +  + P++  YS+ I GL    R + A    L   +  +GC P+V 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM------ 554
            Y  ++ GLC   R  EA+ L   M  KGL PS   Y  L+ G CK+  ++ A+      
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 555 ------------------LC-----------LSRMLEKESGSPDVITYTTLIDGLCIAGR 585
                             LC              MLEK   S +V+ +T L+DGL   G 
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVV-WTVLLDGLLKEGE 779

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            D  + L + ME + C  N  T++ L   L   D
Sbjct: 780 TDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 215/480 (44%), Gaps = 62/480 (12%)

Query: 246 LITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ----------- 291
           +I SC +EGE+   T  + EI    D      LC S   +L+  G  D            
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSKYDFGYT--LC-SFTTLLIQLGKFDMVDLARDMYIKM 193

Query: 292 ----------AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                      +N ++  + K   + +  + M  IF+    PN  ++  +I    ++  L
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           DLA ++F  M + GC  N   Y+ LI+GLC+  RLEE+ ++L EM + G +PT +T    
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC       A+ L+ KM+ +G  P ++  T LI  L + GK   A      M+ +G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P  V Y+A I  L    R + A  +F+ + +HG  P    YN II   C    + +A  
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM-------------------- 560
           +F++M+  G  P+V TYN LI G+CK GN++ AM  L  M                    
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 561 ----LEKESG----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
               LE  +           SP+ +TYT +IDG     + DDA+ L+ +M E G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  +I+G  K +    A      M ++G+ P++  + + I          LAF++  EM
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 265/564 (46%), Gaps = 29/564 (5%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS- 79
           +VK  C  +      LI  L S G +EEA  + +++ ++G+  P  Y+Y   L +LC + 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI-EPTVYTYTIPLVSLCDAG 321

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
           CS + VE+ L +M+  G   +  T T L+      G+F+ A+ ++++++  G V   V +
Sbjct: 322 CSSEAVEL-LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+      G  + A  + + M       + +T+  +I  F     + KA+ +FDKM K
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +G + +   Y+ +I G CK   L  A++L   MKG+G+ PD    ++LI+  S  G+L  
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 259 LVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                +   +  ++   +   +I+    +   +D A  L   M++   +           
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL----------- 549

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P++ +++++I+   K   +  A +   +M + G + NV  Y + IDGLC + R  
Sbjct: 550 -----PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            ++++  EME+  + P  +T +S+   LC+  R +     NL+ ++   G EP V   T 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+K LC  G+  EA + +  M ++G  P    Y A + G     +V+ AL +F  +   G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
               +  Y  +I  LCK   + EA+ +F  M+ K        + +L++G  K G  D   
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD--- 781

Query: 555 LCLS--RMLEKESGSPDVITYTTL 576
           LCL    ++E  + + +  TY  L
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVML 805


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 316/660 (47%), Gaps = 35/660 (5%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
             LI   G  G   +A   F+++K  G+  PN  + N  L +L +   +   +    E++ 
Sbjct: 444  LLIDYHGKSGHPGKALETFEKMKARGIA-PNIVACNASLYSLAEMGRLGEAKAMFNELKS 502

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDK 153
             G   D  T   +++ Y   GQ D+A+ + +E+       D  V + L+    K G V++
Sbjct: 503  SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A ++  RM++ N+     T+ +L+ G  K+ ++ KA+QLF+ M   G + +   ++ ++ 
Sbjct: 563  AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLD 622

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM- 272
             LCKN ++++AL+++ +M      PD    + +I     + ++      IW    +  + 
Sbjct: 623  CLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIK---NAIWLFHQMKKLL 679

Query: 273  ----TLLCNSIMRILVSNGSIDQAYNLLQAM---------------IKGEPIADVGVEML 313
                  LC +++  ++ +G I+ A+ + +                 + G  + + G E  
Sbjct: 680  RPDHVTLC-TLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA 738

Query: 314  MIFKG-----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLID 367
            ++F        +  + S    II  L K  K  +A ++F + T ++G    + +YN LID
Sbjct: 739  ILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798

Query: 368  GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            G    + +E ++ L  EM+ +G  P  FT NS+     +   +    +L  +M  +G +P
Sbjct: 799  GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858

Query: 428  WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                  ++I  L K  +  +A     ++V   F P    +   I GL+   R+D A E+F
Sbjct: 859  NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918

Query: 488  RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
              +  +GC P+   YNI+++G  K   V  A + F  M+ +G+ P + +Y +L++  C +
Sbjct: 919  DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978

Query: 548  GNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G +D A+    ++  K++G  PD++ Y  +I+GL  + R ++A+ L++EM+ +G  P+  
Sbjct: 979  GRVDDALHYFEKL--KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLY 1036

Query: 607  TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            T+ +LI  L        A   +  ++  G+KP++F + ALI  +    N  LA+ + K+M
Sbjct: 1037 TYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 171/646 (26%), Positives = 282/646 (43%), Gaps = 57/646 (8%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L  +G + EA  +F+++K  GL  P++ +YN +++   K   VD     L EM       
Sbjct: 484  LAEMGRLGEAKAMFNELKSSGLA-PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     +G+ ++A  +F  + +       V ++ILL    K G++ KA +L 
Sbjct: 543  DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M+      N  TF  L+    K   VD AL++F KMT      D   ++ II G  K 
Sbjct: 603  ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---------------TLLVKEI 263
             Q++ A+ L+ +MK   + PD   L  L+      G++               + + +  
Sbjct: 663  NQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721

Query: 264  WEDRDVNTMT-------------LLCNSI----------MRILVSNGSIDQAYNLLQAMI 300
            WED     +T             L+C +I          +++L  +     A N+     
Sbjct: 722  WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781

Query: 301  KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            K     ++GV+          P    ++++I+  L+   +++A +LF EM   GC  + F
Sbjct: 782  K-----ELGVK----------PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF 826

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             YN+LID    S ++ E ++L  EM   G KP   T N +   L +   +  A++L   +
Sbjct: 827  TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                  P       LI  L K G+  +A      MV  G  P+   Y+  + G   +  V
Sbjct: 887  VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946

Query: 481  DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            D A E F+ +   G  PD+ +Y I++  LC A RV +A   F ++   GL P +  YNL+
Sbjct: 947  DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006

Query: 541  INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            ING  +S   ++A L L   ++     PD+ TY +LI  L I G  ++A  ++ E++  G
Sbjct: 1007 INGLGRSQRTEEA-LSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 601  CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
              PN  T+ ALI G         A   ++ M   G  P+   F  L
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 168/641 (26%), Positives = 300/641 (46%), Gaps = 31/641 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G ++EA  +  ++  +G C P+  +Y  L++ALC +  +D       +M+   
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDG-CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              DK T   LL  + + G  DK   ++ E+   G+  + V F+IL+ A  K G +++A 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +L++ M    +  N  T+  LI G ++ +R+D AL LF  M   G    A  Y ++I   
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--- 272
            K+     AL+ + +MK  GI P+    +  + S ++ G L    K ++ +   + +   
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE-AKAMFNELKSSGLAPD 508

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIF- 316
           ++  N +M+     G +D+A  LL  M K +   DV V               E   +F 
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFC 568

Query: 317 ---KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +  ++P   +++I++  L K+G++  A+ LF  M   GC  N   +N L+D LC ++
Sbjct: 569 RMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKND 628

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++ + ++  +M     +P   T N++     ++  +  A+ L  +M+       V   T
Sbjct: 629 EVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCT 688

Query: 434 LLIKELCKHGKAMEAFRFLTDMV-QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           LL   + K G+  +AFR   D   Q G   D   +   +GG++     + A+     +  
Sbjct: 689 LL-PGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVC 747

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
              C D      II  LCK ++ + A ++F +   + G+ P++  YNLLI+G+ +  N++
Sbjct: 748 RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807

Query: 552 QAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            A      M  K +G +PD  TY +LID    +G+ ++   L++EM  +GC PN IT+  
Sbjct: 808 VAWNLFEEM--KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNM 865

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +I+ L K +R   A+  +  +      P    F  LI   L
Sbjct: 866 VISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 184/702 (26%), Positives = 308/702 (43%), Gaps = 106/702 (15%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+   +FD ++R+ +   N  +Y  + ++L     +      L++M++ G+  + Y+  
Sbjct: 140 VEDMAFVFDLMQRQ-IIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+     SG   +AL V+  ++  G       FS L+VA  K   +     L+E M+  
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +R N  T+ + I    +  ++D+A ++  +M   G   D   Y V+I  LC  ++L+ A
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDA 318

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-------RDVNTMTLLCN 277
           + L+++MK S   PD      L+   SD G L   V++IW +        DV T T+L N
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK-VEKIWTEMEADGYAPDVVTFTILVN 377

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +    L   G I++A++LL  M                 K  V PN  +++ +I+ LL+ 
Sbjct: 378 A----LCKAGRINEAFDLLDTM----------------RKQGVLPNLHTYNTLISGLLRA 417

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLID---------------------GL------C 370
            +LD AL LF  M  +G     + Y  LID                     G+      C
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477

Query: 371 NSN--------RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N++        RL E+  +  E++ SG  P   T N M +C  +   V  A+ L+ +M  
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK 537

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
              EP V     LI  L K G+  EA++    M +    P +V Y+  + GL    ++  
Sbjct: 538 VQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A++LF  +  HGC P+ + +N ++  LCK   V  A  +F +M T    P V T+N +I+
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML---------- 592
           G+ K   I  A+    +M  K+   PD +T  TL+ G+  +G+ +DA  +          
Sbjct: 658 GFIKQNQIKNAIWLFHQM--KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGS 715

Query: 593 ------WNE-----MEEKG----------------CAPNRITFMALITGLCKCDRPRAAL 625
                 W +     + E G                C  + +  + +I  LCK  +   A 
Sbjct: 716 NIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSV-LIPIIKVLCKHKKTSVAR 774

Query: 626 -VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            V  +  KE G+KP + V+  LI  FL   N  +A+ + +EM
Sbjct: 775 NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM 816



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 188/398 (47%), Gaps = 23/398 (5%)

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ---AYNLLQAMIKG 302
           ++ S SD        K + E  +V   T  CN ++ IL  +  ++     ++L+Q  I  
Sbjct: 97  VLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQI-- 154

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            +  N  ++ II  +L   G L  A S   +M + G + N + Y
Sbjct: 155 -----------------IRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI  L  S   +E+ E+ R M   G KP+  T +++     +R+++   + L+ +M  
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P +   T+ I+ L + GK  EA+R +  M  +G  PD+V Y+  I  L   +++D 
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ LF  + +    PD V Y  ++        + + E ++ EM   G  P V T+ +L+N
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             CK+G I++A   L  M  K+   P++ TY TLI GL  A R DDA+ L++ ME  G  
Sbjct: 378 ALCKAGRINEAFDLLDTM-RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           P   T++ LI    K   P  AL  F  MK +G+ P++
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 240/530 (45%), Gaps = 21/530 (3%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+  LG  G +++A  LF+ +   G C PN  ++N LL+ LCK+  VDL      +M   
Sbjct: 585  LLAGLGKEGQIQKAVQLFESMNGHG-CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM 643

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
                D  T   ++  +    Q   A+ +F+++      D      LL    K G+++ A 
Sbjct: 644  NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAF 703

Query: 156  ELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E         ++   +  ++ G + ++  +KA+   +++       D ++   II  
Sbjct: 704  RITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKV 763

Query: 215  LCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM- 272
            LCK+K+  +A  ++ +  K  G+ P  ++ + LI    +   + +      E +      
Sbjct: 764  LCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAP 823

Query: 273  -TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             T   NS++     +G I++ ++L   M+                +G   PNT +++++I
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLT---------------RG-CKPNTITYNMVI 867

Query: 332  NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            + L+K  +LD A+ L+  +           +  LIDGL  S RL++++E+   M   G +
Sbjct: 868  SNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927

Query: 392  PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
            P     N +     +   V  A    ++M  +G  P +K  T+L+  LC  G+  +A  +
Sbjct: 928  PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987

Query: 452  LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
               + Q G  PD+V Y+  I GL   +R + AL LF ++   G  PD+  YN +I  L  
Sbjct: 988  FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047

Query: 512  AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
               + EA  ++ E+   GL P+V TYN LI G+  SGN + A     +M+
Sbjct: 1048 VGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 253/548 (46%), Gaps = 25/548 (4%)

Query: 113 NSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           N G+  +     +EI    D G+     F+ LL+   K+  VD A ++  +M +  IR +
Sbjct: 143 NEGEVKRVTQFLSEINSKYDFGYT-LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPS 201

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  +I+   KK RV +A  +   + +     +A  Y  +I G C+N  L++A  ++ 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
            M   G  P+    S LI     EG L   +  + E   + +          +  L   G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +A  LL  M K               +G V PN  +F  +I+ L +DGK ++A+ L+
Sbjct: 322 CSSEAVELLGKMKK---------------RGCV-PNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   G +     YN LI+ LC   R E ++ + + M   G  P+  T N + +C C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            D+  A+ +  KM   G  P V     LI   CK G    A R L  M   G  PD   Y
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G     +++ A  LF  +  HG  P+ V Y  II G     +V +A  LF +M+ 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G +PS  TYN++I+G+ K+ +I +A     +M+ K+   P+VITYT+ IDGLC  GR  
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV-KQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVA 645
            A  +++EME++   PN  T+ +LI GLC+  R   A ++     +   G +P++  +  
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 646 LISAFLSE 653
           L+     E
Sbjct: 665 LVKGLCGE 672



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/646 (25%), Positives = 285/646 (44%), Gaps = 64/646 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQV 110
           + +++ R+ L  P ++    ++++      V  V   L E+   Y +GY   + T LL  
Sbjct: 117 MLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQ 176

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
                  D A  ++ ++++ G     + F+ ++    K G V +A  ++  +   +   N
Sbjct: 177 LGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  LI G  +   +D A  +FD+M K G   ++  Y  +I GLC   +LE A+ +  
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296

Query: 230 EMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           EM   GI P     +  + S  D G      EL   +K+     ++ T T L + + R  
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR-- 354

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             +G  + A               +G+   M+  G V P T +++ +IN L  +G+ + A
Sbjct: 355 --DGKFEIA---------------IGLYHKMLADGLV-PTTVTYNALINQLCVEGRFETA 396

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++F+ M   G + +   YN +I   C    ++++  +  +M ++G  P   T N++   
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYG 456

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C++ ++  A+ L+  M+  G +P     T LI    + GK   A      M++ G  P+
Sbjct: 457 YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y+A I G  ++ +VD AL LF  +   G  P    YN++ISG  K   ++EAE+   
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNI--------------------------------- 550
           +M+ +GL+P+V TY   I+G C++G                                   
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 551 ---DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
              D  M  L   L      P+V TYTTL+ GLC  GR  +A  L   M++KG  P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + AL+ G CK  +  +AL  F  M   G +  +  + ALI A   E
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 272/634 (42%), Gaps = 64/634 (10%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P  L F  +I  L   G V+EA ++   + R     PN ++Y  L+   C++ ++DL   
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD-AYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFS 146
               M   G   +  T + L+   C+ G+ ++A+ +  E++  G     + ++I LV+  
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
             G   +A EL+ +M       N +TF  LI G  +  + + A+ L+ KM   G      
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKE 262
            Y+ +I  LC   + E A  ++  M   G  P  +  +++I      G+    + +  K 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +      N +T   N+++      G+++ A  LL+ M KG  +                P
Sbjct: 439 LKAGSSPNVITY--NTLIYGYCKQGNLNNAMRLLEIM-KGNGL---------------KP 480

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  ++  +I+   + GKL+ A SLF  M + G   N   Y  +IDG  N  +++++  L 
Sbjct: 481 DAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M ESG  P+  T N M     +   +  A N   KM  QG  P V   T  I  LC++
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA--LELFRDICAHGCCPDVV 500
           G+   AF+   +M +  + P++  YS+ I GL    R + A    L   +  +GC P+V 
Sbjct: 601 GRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM------ 554
            Y  ++ GLC   R  EA+ L   M  KGL PS   Y  L+ G CK+  ++ A+      
Sbjct: 661 TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720

Query: 555 ------------------LC-----------LSRMLEKESGSPDVITYTTLIDGLCIAGR 585
                             LC              MLEK   S D + +T L+DGL   G 
Sbjct: 721 DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS-DEVAWTVLLDGLLKEGE 779

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            D  + L + ME + C  N  T++ L   L   D
Sbjct: 780 TDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 215/480 (44%), Gaps = 62/480 (12%)

Query: 246 LITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ----------- 291
           +I SC +EGE+   T  + EI    D      LC S   +L+  G  D            
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSKYDFGYT--LC-SFTTLLIQLGKFDMVDLARDMYIKM 193

Query: 292 ----------AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                      +N ++  + K   + +  + M  IF+    PN  ++  +I    ++  L
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           DLA ++F  M + GC  N   Y+ LI+GLC+  RLEE+ ++L EM + G +PT +T    
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC       A+ L+ KM+ +G  P ++  T LI  L + GK   A      M+ +G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P  V Y+A I  L    R + A  +F+ + +HG  P    YN II   C    + +A  
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM-------------------- 560
           +F++M+  G  P+V TYN LI G+CK GN++ AM  L  M                    
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 561 ----LEKESG----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
               LE  +           SP+ +TYT +IDG     + DDA+ L+ +M E G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  +I+G  K +    A      M ++G+ P++  + + I          LAF++  EM
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 265/564 (46%), Gaps = 29/564 (5%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS- 79
           +VK  C  +      LI  L S G +EEA  + +++ ++G+  P  Y+Y   L +LC + 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI-EPTVYTYTIPLVSLCDAG 321

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-F 138
           CS + VE+ L +M+  G   +  T T L+      G+F+ A+ ++++++  G V   V +
Sbjct: 322 CSSEAVEL-LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+      G  + A  + + M       + +T+  +I  F     + KA+ +FDKM K
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +G + +   Y+ +I G CK   L  A++L   MKG+G+ PD    ++LI+  S  G+L  
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 259 LVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                +   +  ++   +   +I+    +   +D A  L   M++   +           
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL----------- 549

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P++ +++++I+   K   +  A +   +M + G + NV  Y + IDGLC + R  
Sbjct: 550 -----PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            ++++  EME+  + P  +T +S+   LC+  R +     NL+ ++   G EP V   T 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTT 664

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+K LC  G+  EA + +  M ++G  P    Y A + G     +V+ AL +F  +   G
Sbjct: 665 LVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLG 724

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
               +  Y  +I  LCK   + EA+ +F  M+ K        + +L++G  K G  D   
Sbjct: 725 FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD--- 781

Query: 555 LCLS--RMLEKESGSPDVITYTTL 576
           LCL    ++E  + + +  TY  L
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVML 805


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 169/632 (26%), Positives = 274/632 (43%), Gaps = 52/632 (8%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           RR A  R +   ++ S     P     LIR         EA   F  +    + VP + S
Sbjct: 66  RRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASAS 125

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
            N LL  L ++    L +   + +       + YTL  ++  YC + +FD A +V +E+ 
Sbjct: 126 -NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEME 184

Query: 129 DH-GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
               + D    ++L+ A  + G+VD A  L++ M +  ++    T+  ++ G  K  R D
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           KA ++F  M +   A D   ++++IGG C+  +++ A++ Y EM+   +TPD    S LI
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              S  GE+                                 D A   L+ M KG  +  
Sbjct: 305 GLFSRRGEM---------------------------------DHAGAYLREM-KGLGLVP 330

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
            GV   M+  G                 + G +  AL +  EM   GC+ +V  YN L++
Sbjct: 331 DGVIYTMVIGG---------------FCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLN 375

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC  +RL ++ +LL EMEE G  P   T  ++    CR+ +   AL L   +  Q   P
Sbjct: 376 GLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V     LI  +C+ G   +A     DM     LP+ + YS  I    +  +V+ A    
Sbjct: 436 DVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFL 495

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
            ++   G  P++  YN II G C++  V + +    +M    + P + T+N LI+G+ K 
Sbjct: 496 DEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKE 555

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
            N+  A    + ++EKE   PD +TY  +I+G    G   DA  ++  M + G  P+R T
Sbjct: 556 ENMHGAFNVFN-IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +M+LI G       + A      M  +G  PD
Sbjct: 615 YMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 180/350 (51%), Gaps = 1/350 (0%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K  V P+  + +++I+   + G +D A++L   M   G    +  YN+++ GLC   R +
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ E+ R M++    P   + N +    CR  +V  A+   ++M+ +   P V   + LI
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               + G+   A  +L +M   G +PD V Y+  IGG      +  AL +  ++   GC 
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDVV YN +++GLCK  R+ +AE L NEM  +G+ P + T+  LI+G+C+ GN + A+  
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
              +L ++   PDV+TY +LIDG+C  G    A  LW++M  +   PN IT+  LI   C
Sbjct: 425 FDTLL-RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHC 483

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +   A      M +KG  P++  + ++I  +    N     + L++M
Sbjct: 484 EKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 173/619 (27%), Positives = 272/619 (43%), Gaps = 58/619 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+   +  ++E A  +F Q K+ GL +    S N LL+ L ++   + +    +EM+ 
Sbjct: 184 LLIKVFAANSMLENAVDVFLQAKKTGLELSTR-SCNFLLKCLAEANRREFLRSLFEEMKS 242

Query: 95  YGWGYDKYTLTPLLQVYC--NSGQFD----KALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            G   + +T T ++  YC  N G+ D    +A  +  E+  +G     V +S  +    +
Sbjct: 243 TGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCR 302

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G V+ A + +  +   N  +N   +  +IHG  KK  +D+AL++ ++M   G + D   
Sbjct: 303 VGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYT 362

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y ++I G CK   +E  L L  EMK S + P     S L                     
Sbjct: 363 YSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHG------------------ 404

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                  LC   +    S+ S+D   +L  A  K +  A                    +
Sbjct: 405 -------LCKKRL----SDISLDIFRDLGAAGYKYDQTA--------------------Y 433

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+I      G LD A  L  EM +     +   + +L+ G C       + E    M E
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  T N +    CR   V  ALNL+ +M+ QG  P +     +I  LCK  K+  
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M++   LP +V YS  I G         AL L+  +   G  PD+VAY I+I+
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LC   R+ EA +LF +M   G+ P   +Y  +I G+C+ G++ +A    + ML++    
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR-GHL 672

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P V+TYT+L+DG C   R D A ML +EM+ KG  P+ +T+  LI    +      AL  
Sbjct: 673 PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEM 732

Query: 628 FRMMKEKGMKPDMFVFVAL 646
              MKE G+ PD   ++ L
Sbjct: 733 LNEMKENGVLPDHMTYMML 751



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 266/561 (47%), Gaps = 33/561 (5%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS----CSVD 83
           +S  +  FL++CL      E    LF+++K  G   PN ++Y  ++   CK       +D
Sbjct: 212 LSTRSCNFLLKCLAEANRREFLRSLFEEMKSTG-PPPNVFTYTIMMNFYCKGNFGEADID 270

Query: 84  LVEMR--LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSI 140
             +    L+EM+  G      T +  +   C  G  + AL     +I  +G V+ + ++ 
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNA 330

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++    K GE+D+A +++E M  C I  +  T+ +LIHGF K+  V+K L L ++M  S 
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
                  Y  +  GLCK +  +++L ++ ++  +G   D    S LI     +G+L    
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS-- 448

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML----MIF 316
                           + +M  +V N       N  ++++ G     + V  L    M+ 
Sbjct: 449 ---------------AHKLMEEMVRNNLAPDPSNF-ESLVHGFCKMGLWVNALEFFNMML 492

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           +G + P+ ++ ++II+   ++G+++ AL+L  EM   G   N+F YN +I+ LC   + E
Sbjct: 493 EGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSE 552

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + EL   M +    P+    +++     ++ +   AL L  +M   G  P +   T+LI
Sbjct: 553 RALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILI 612

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC   +  EA+     M + G  PD + Y++ I G   I  +  A  LF ++   G  
Sbjct: 613 NILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHL 672

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P VV Y  ++ G CK  R+  A+ L +EM  KG+ P V TYN+LI    + GN+D+A+  
Sbjct: 673 PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEM 732

Query: 557 LSRMLEKESGS-PDVITYTTL 576
           L+ M  KE+G  PD +TY  L
Sbjct: 733 LNEM--KENGVLPDHMTYMML 751



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 40/350 (11%)

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
           ++V +++ LI     ++ LE + ++  + +++G + +  + N + +CL          +L
Sbjct: 177 RSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCK--HGKA----MEAFRFLTDMVQEGFLPDIVCYSAA 470
             +M+  G  P V   T+++   CK   G+A     +A   L +M + G  P +V YS  
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL  +  V+ AL+  R + +     +V  YN II GLCK   + EA  +  EM + G+
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 531 IPSVATYNLLINGWCKSGNIDQAM------------------------LCLSRMLE---- 562
            P V TY++LI+G+CK G++++ +                        LC  R+ +    
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416

Query: 563 --KESGSP----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             ++ G+     D   Y+ LI G C+ G  D A  L  EM     AP+   F +L+ G C
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K      AL  F MM E G+ P +     +I A   E     A  ++ EM
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM 526


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/572 (28%), Positives = 273/572 (47%), Gaps = 54/572 (9%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M+DYG   +  TL+ LL       +F + L +F+ +++ G   D +++++++    +  +
Sbjct: 181 MRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKD 240

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            +KA E+I + +     L+  T+ V I+G  K  RV +A+++   + + G  +D   Y  
Sbjct: 241 FNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCT 300

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ GLC+ ++ E+ +++  EM   G  P    +S LI     EG                
Sbjct: 301 LVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI-----EG---------------- 339

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                       L+  GSI+ A+ LL        +  +GV           PN   ++ +
Sbjct: 340 ------------LIKMGSIEGAFELLN------KVGKLGV----------VPNLFVYNSM 371

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN+L K GKL+ A  LF  M + G   N   Y  LIDG     +L+ ++    +M E G 
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
             T ++ NSM  C C+   +  A  L ++M  +G +P V   T LI   CK G   +AF+
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFK 491

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M  +G  P+ V ++A I GL  I ++  A +LF ++      P+ V YN++I G C
Sbjct: 492 LYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHC 551

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +      A +L +EMI KGL P   TY  LI G C +G + +A   ++ +  K     D 
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ-RLDE 610

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG-LCKCDRPRAALVHFR 629
           + YT L+ G C  GR  +A++   EM  +G   + +++  LI+G L + DR    L+  R
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELL--R 668

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            M  KGM+PD  ++  LI  F+   N   AFE
Sbjct: 669 EMHGKGMQPDNVIYTILIDGFIKSGNLKKAFE 700



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 256/531 (48%), Gaps = 20/531 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F +L+  + +   V     ++  M D  +    +T   L++   +  +  + L+LFD + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
            +G   D  +Y V++  LC+ K    A ++ ++ +G+G +      +  I          
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS---- 273

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MI 315
              K +WE  +V   +L    +   LV+  ++      +Q         +VG+EM+  MI
Sbjct: 274 ---KRVWEAVEVKR-SLGEKGLKADLVTYCTLVLGLCRIQEF-------EVGMEMMDEMI 322

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G V P+ ++   +I  L+K G ++ A  L  ++ ++G + N+F+YN++I+ LC + +L
Sbjct: 323 ELGYV-PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EE+  L   M E G  P   T   +     RR  +  A     KM   G    V     +
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   CK GK   A     +MV +G  P +  Y++ I G      V  A +L+ ++   G 
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V +  +I GLC+  ++AEA  LF+EM+   ++P+  TYN+LI G C+ GN  +A  
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M+ K+  SPD  TY  LI GLC  GR  +A    N++  K    + + + AL+ G 
Sbjct: 562 LLDEMI-KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGF 620

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  R + ALV  + M  +G++ D+  +  LIS  L++ N  + FE+L+EM
Sbjct: 621 CKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ-NDRILFELLREM 670



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 307/674 (45%), Gaps = 38/674 (5%)

Query: 1   MASILSRARRIAPLR-------VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLF 53
           ++++L+   RI   R        L    VK  C++       +++CL  +    +A  + 
Sbjct: 193 LSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYT----VVVKCLCELKDFNKAKEII 248

Query: 54  DQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           +Q +  G C  +  +YN  +  LCKS  V + VE++ + + + G   D  T   L+   C
Sbjct: 249 NQAEGNG-CSLSIVTYNVFINGLCKSKRVWEAVEVK-RSLGEKGLKADLVTYCTLVLGLC 306

Query: 113 NSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
              +F+  + + +E+I+ G+V  E   S L+    K G ++ A EL+ ++    +  N  
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            +  +I+   K  ++++A  LF  M + G   +   Y ++I G  +  +L++A   +++M
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 232 KGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
              GI+      + +I      G++    LL KE+  D+ +        S++     +G 
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV-DKGLKPTVATYTSLISGYCKDGL 485

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +A+ L   M  G+ IA               PNT +F  +I  L +  K+  A  LF 
Sbjct: 486 VPKAFKLYHEMT-GKGIA---------------PNTVTFTALICGLCQINKMAEASKLFD 529

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM ++  + N   YN LI+G C       ++ELL EM + G  P  +T   +   LC   
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A   +  +  +         T L++  CK G+  EA     +MV  G   D+V Y+
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G ++ +   +  EL R++   G  PD V Y I+I G  K+  + +A + +  MI +
Sbjct: 650 VLISGALN-QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G +P+  TY  L+NG  K+G +++A L   RML  E+  P+ ITY   +D L   G  ++
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEA-IPNHITYGCFLDHLTKEGNMEN 767

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+ L N M + G   N +T+  LI G C+  + + A     +M   GM PD   +   I 
Sbjct: 768 ALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIY 826

Query: 649 AFLSELNPPLAFEV 662
            +    N   A ++
Sbjct: 827 EYCKRGNVDAAMDM 840



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 225/520 (43%), Gaps = 69/520 (13%)

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKAL------------------QLFDKMTKSGFASDAA 206
           N   +  +FC+LIH  ++ +    A                     F+   K  F+S + 
Sbjct: 98  NFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSG 157

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            +D++I    +NK++   + + + M+  G+ P+                           
Sbjct: 158 -FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPE--------------------------- 189

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             V T++ L N++ RI        Q   L   ++                   V P+   
Sbjct: 190 --VRTLSALLNALARIR----KFRQVLELFDTLVNA----------------GVKPDCYI 227

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + +++  L +    + A  +  +    GC  ++  YN  I+GLC S R+ E+ E+ R + 
Sbjct: 228 YTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLG 287

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E G K    T  ++   LCR Q+    + ++ +M   G+ P     + LI+ L K G   
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            AF  L  + + G +P++  Y++ I  L    +++ A  LF  +   G  P+ V Y I+I
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G  +  ++  A   FN+MI  G+  +V +YN +IN  CK G +  A L    M++K   
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK-GL 466

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P V TYT+LI G C  G    A  L++EM  KG APN +TF ALI GLC+ ++   A  
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F  M E  + P+   +  LI     E N   AFE+L EM
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 233/540 (43%), Gaps = 27/540 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G +EEA +LF  +   GL  PN+ +Y  L++   +   +D+      +M + 
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLN-PNDVTYTILIDGFGRRAKLDVAFYYFNKMIEC 429

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G     Y+   ++   C  G+   A  +F E++D G       ++ L+  + K G V KA
Sbjct: 430 GISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKA 489

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L   M    I  N  TF  LI G  + +++ +A +LFD+M +     +   Y+V+I G
Sbjct: 490 FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C+      A +L  EM   G++PD      LI      G ++   KE   D       L
Sbjct: 550 HCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSE-AKEFINDLHHKHQRL 608

Query: 275 --LC-NSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEML----------------- 313
             LC  ++++     G I +A    Q M+ +G  +  V   +L                 
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLR 668

Query: 314 -MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M  KG + P+   + I+I+  +K G L  A   +  M   G + N   Y  L++GL  +
Sbjct: 669 EMHGKG-MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             + E+  L + M      P H T       L +  ++  AL L   M        V +N
Sbjct: 728 GYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYN 787

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI+  C+ GK  EA + L  M+  G +PD + YS  I        VD A++++  +  
Sbjct: 788 -ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQ 846

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PD V +N +I   C    +  A  L N+M+ +GL P+ +TY+ L+    +   + Q
Sbjct: 847 RGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 202/491 (41%), Gaps = 56/491 (11%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YSYN ++   CK   + + E+  KEM D G      T T L+  YC  G   KA  +++E
Sbjct: 436 YSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHE 495

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G     V F+ L+    +  ++ +A +L + M +  I  NE T+ VLI G  ++  
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLC----------------------------- 216
             +A +L D+M K G + D   Y  +I GLC                             
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615

Query: 217 ------KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVKEIWEDRD 268
                 K  +++ AL    EM G G+  D    + LI+   ++ +  L  L++E+   + 
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREM-HGKG 674

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +    ++   ++   + +G++ +A+                   +MI +G V PN+ ++ 
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFW---------------YIMIGEGYV-PNSVTYT 718

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++N L K G ++ A  LF+ M     + N   Y   +D L     +E + +L   M + 
Sbjct: 719 ALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQG 778

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
            F  T  T N + R  C+      A  L+  M   G  P     +  I E CK G    A
Sbjct: 779 SFANT-VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAA 837

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M+Q G  PD V ++  I        +D AL+L  D+   G  P    Y+ ++  
Sbjct: 838 MDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQ 897

Query: 509 LCKAQRVAEAE 519
           L +  R+ + +
Sbjct: 898 LAQRARLTQVQ 908



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 183/407 (44%), Gaps = 33/407 (8%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + F  LI  L  +  + EA+ LFD++  E   +PN  +YN L+E  C+  +    
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMV-ELKILPNEVTYNVLIEGHCREGNTTRA 559

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVA 144
              L EM   G   D YT  PL+   C++G+  +A    N++   H  +DE  ++ LL  
Sbjct: 560 FELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQG 619

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL-QLFDKMTKSGFAS 203
           F K G + +A    + M    ++++  ++ VLI G + ++  D+ L +L  +M   G   
Sbjct: 620 FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQN--DRILFELLREMHGKGMQP 677

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLV 260
           D  +Y ++I G  K+  L+ A + +  M G G  P+    + L+      G   E  LL 
Sbjct: 678 DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLF 737

Query: 261 KEIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML------ 313
           K +     + N +T  C   +  L   G+++ A  L  AM++G     V   +L      
Sbjct: 738 KRMLVGEAIPNHITYGC--FLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQ 795

Query: 314 -------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                        MI  G V P+  ++   I    K G +D A+ ++  M Q G   +  
Sbjct: 796 IGKFQEAAKLLDVMIGIGMV-PDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           ++N LI   C +  L+ + +L  +M   G KPT  T +S+   L +R
Sbjct: 855 VFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQR 901


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 182/700 (26%), Positives = 299/700 (42%), Gaps = 79/700 (11%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           +R  +SP    F +R L    + E    ++ Q+ ++GL +P+  +YN ++++ CK   + 
Sbjct: 27  ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGL-LPDTVTYNTMIKSYCKEGDLT 85

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILL 142
                 + + + G   + +T   L+  YC +G+  KA  +F  +   G   +E+ ++IL+
Sbjct: 86  TAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 145

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
                   V KA  L   M       N + F  LI G  K  RV  A  LFD M ++G  
Sbjct: 146 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVV 205

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE------L 256
                Y+ +I G  K  ++  AL++   M+ +G  PD    + LI    D+        L
Sbjct: 206 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL 265

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIM------------RILVSNGSID-QAY-NLLQAMIKG 302
              VKE +    V    L+    M            +++ S   +D Q +  L+ ++IK 
Sbjct: 266 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 325

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           + + +    +  I    + PN  ++  II+   K GK+D+AL + + M + GC  N + Y
Sbjct: 326 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 385

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+L+ GL    +L ++  LL +M++ G  P   T  ++ +  C   D   A  L   M  
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G +P      +L   LCK G+A EA+ F+   V++G     V Y+  I G       D 
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDF 502

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE------------------------- 517
           A  L   +   GC PD   Y++++  LCK +R+ E                         
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 562

Query: 518 ----------AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
                     A+ ++NEM + G  PS  TY + IN +CK G ++ A   + +M E+E  +
Sbjct: 563 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVA 621

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+TY  LIDG    G  D A      M    C PN  T+  L+  L K +      V 
Sbjct: 622 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVD 681

Query: 628 F-----------------RMMKEKGMKPDMFVFVALISAF 650
                             RM+K  G+ P +  + +LI+ F
Sbjct: 682 TSGMWNLIELDITWQLLERMVKH-GLNPTVTTYSSLIAGF 720



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/635 (25%), Positives = 281/635 (44%), Gaps = 41/635 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S L ++ R+   R+L   + ++    S      +I     +G + +A  + + +++ G
Sbjct: 179 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 238

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P++++YN L+  LC   + +  E+ L      G+     T T L+  YC + +FD A
Sbjct: 239 -CHPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 296

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L + N+++     +D  VF  L+ +  K   + +A EL+  +    +  N  T+  +I G
Sbjct: 297 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 356

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K  +VD AL++   M + G   +A  Y+ ++ GL K+K+L  A+ L ++M+  GI P+
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416

Query: 240 FEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
               + L+    DE +      + E+ E   +         +   L   G  ++AY+   
Sbjct: 417 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF-- 474

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                  I   GV +  ++          +  +I+   K G  D A +L   M   GC  
Sbjct: 475 -------IVRKGVALTKVY----------YTTLIDGFSKAGNTDFAATLIERMIDEGCTP 517

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + + Y+ L+  LC   RL E+  +L +M   G K T F    +   + R      A  + 
Sbjct: 518 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 577

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M   GH+P     T+ I   CK G+  +A   +  M +EG  PD+V Y+  I G   +
Sbjct: 578 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 637

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ----RVAEAEDLFN---------- 523
             +D A    + +    C P+   Y +++  L K      R  +   ++N          
Sbjct: 638 GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQL 697

Query: 524 --EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
              M+  GL P+V TY+ LI G+CK+G +++A L L  M  K   SP+   YT LI   C
Sbjct: 698 LERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK-GLSPNEDIYTLLIKCCC 756

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
                + A+   + M E G  P   ++  L+ GLC
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 791



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 246/577 (42%), Gaps = 84/577 (14%)

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V+++++  G + + V ++ ++ ++ K G++  A      + +  +     T   L+ G+ 
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   + KA  LF  M   G   +   Y ++I GLC  K +  AL L+  MK  G +P+  
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI+                          LC S        G +  A  L  AM +
Sbjct: 175 AFTFLISG-------------------------LCKS--------GRVGDARLLFDAMPQ 201

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             V P+  +++ +I    K G+++ AL +   M + GC  + + 
Sbjct: 202 N----------------GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 245

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI GLC+  + EE+ ELL    + GF PT  T  ++    C  +    AL +  KM 
Sbjct: 246 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 304

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               +  ++    LI  L K  +  EA   L ++   G +P+++ Y++ I G     +VD
Sbjct: 305 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 364

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +ALE+ + +   GC P+   YN ++ GL K +++ +A  L  +M   G+IP+V TY  L+
Sbjct: 365 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 424

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPD-----VIT------------------------ 572
            G C   + D A   L  M+E+    PD     V+T                        
Sbjct: 425 QGQCDEHDFDNAFR-LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT 483

Query: 573 ---YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
              YTTLIDG   AG  D A  L   M ++GC P+  T+  L+  LCK  R   AL    
Sbjct: 484 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 543

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M  +G+K  +F +  LI   L E     A  +  EM
Sbjct: 544 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 224/514 (43%), Gaps = 21/514 (4%)

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A + I R     + L+ K +   +    +    +   +++ ++ + G   D   Y+ +I 
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             CK   L  A + +  +   G+ P+    + L+      GEL    K  W         
Sbjct: 77  SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELR---KACWL-------- 125

Query: 274 LLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                +M  L+     + +Y  L+Q +   + +    V  LM+ +   SPN  +F  +I+
Sbjct: 126 ----FLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 181

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++  A  LF  M Q G + +V  YN +I G     R+ ++ ++   ME++G  P
Sbjct: 182 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 241

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N++   LC  Q    A  L+     +G  P V   T LI   C   K  +A R  
Sbjct: 242 DDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 300

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M+      D+  +   I  LI   R+  A EL  +I A+G  P+V+ Y  II G CK+
Sbjct: 301 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKS 360

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            +V  A ++   M   G  P+  TYN L+ G  K   + +AM  L++M +K+   P+VIT
Sbjct: 361 GKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVIT 419

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           YTTL+ G C     D+A  L+  ME+ G  P+   +  L   LCK  R   A   +  + 
Sbjct: 420 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIV 476

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            KG+      +  LI  F    N   A  +++ M
Sbjct: 477 RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 236/596 (39%), Gaps = 105/596 (17%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +   ++ S+C +     G LI  L     ++EA  L +++   GL VPN  +Y  +++  
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGL-VPNVITYTSIIDGY 357

Query: 77  CKSCSVDLVEMRLKEMQDYG-----WGYDKY----------------------------- 102
           CKS  VD+    LK M+  G     W Y+                               
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 103 -TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
            T T LLQ  C+   FD A  +F  +  +G   DEH +++L  A  K G  ++A   I R
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 477

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
                + L +  +  LI GF K    D A  L ++M   G   D+  Y V++  LCK K+
Sbjct: 478 K---GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           L  AL +  +M   GI             C+                 +   T+L + ++
Sbjct: 535 LNEALPILDQMSLRGI------------KCT-----------------IFAYTILIDEML 565

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R     G  D A  +   M                      P+ +++ + IN+  K+G+L
Sbjct: 566 R----EGKHDHAKRMYNEMTSSGH----------------KPSATTYTVFINSYCKEGRL 605

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A  L  +M + G   +V  YN LIDG  +   ++ ++  L+ M  +  +P ++T   +
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665

Query: 401 FRCL-------CRRQDVVGALNLVR---------KMRVQGHEPWVKHNTLLIKELCKHGK 444
            + L        R  D  G  NL+          +M   G  P V   + LI   CK G+
Sbjct: 666 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 725

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L  M  +G  P+   Y+  I    D K  + AL     +   G  P + +Y +
Sbjct: 726 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 785

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           ++ GLC      + + LF +++  G       + +L +G  K+G +D     LS M
Sbjct: 786 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIM 841


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/628 (26%), Positives = 283/628 (45%), Gaps = 64/628 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDKYTLTPLLQV 110
           +F+  K E        +Y C+++ L      + +E  L EM ++      +      ++ 
Sbjct: 26  MFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKN 85

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           Y   G+  +A+  F E +D    D   H  + ++    ++G  ++A ++  RM D  ++ 
Sbjct: 86  YGRKGKVQEAVDTF-ERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQS 144

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T+ + I  F K +R   AL+L   M + G  S+A  Y  ++ GL  + + + A +L+
Sbjct: 145 DVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELF 204

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM    + PD    +KL+                                  +L   G 
Sbjct: 205 DEMLARCLCPDVVAFNKLV---------------------------------HVLCKKGL 231

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL---- 344
           + ++  LL                  + K  V PN  +F+I +  L ++G LD A+    
Sbjct: 232 VFESERLLGK----------------VLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSR 275

Query: 345 -----SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
                   R+M   G   +   YN++IDG C    ++++  +L++    GFKP  FT  S
Sbjct: 276 VVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCS 335

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+  D   A+ + +    +G  P +     LIK L + G  + A + + +M + G
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            LP+I  Y+  I GL  +  V  A  L  D  A GC PD+  YN +I G CK  ++  A 
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSAT 455

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++ N M ++G+ P V TYN L+NG CK+G  ++ M     M EK   +P++ITY  ++D 
Sbjct: 456 EMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK-GCTPNIITYNIIVDS 514

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM-KEKGMKP 638
           LC A + ++A+ L  EM+ KG  P+ ++F  L TG CK      A   FR M K+  +  
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCH 574

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
               +  ++SAF  +LN  +A ++   M
Sbjct: 575 TTATYNIIVSAFSEQLNMNMAMKLFSVM 602



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 262/586 (44%), Gaps = 33/586 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++  L   G   +A+ ++ +++  G+   + Y+Y   +++ CK+         L+ M + 
Sbjct: 117 IMNILVEFGYHNQAHKVYMRMRDRGV-QSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL 175

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +      ++    +SG+ D A  +F+E++      + V F+ L+    K G V ++
Sbjct: 176 GCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFES 235

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGF---------VKKSRVDKALQLFDKMTKSGFASDA 205
             L+ ++    +  N  TF + + G          V+ SRV +A +   KM   GF  D 
Sbjct: 236 ERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDD 295

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y+ II G CK   ++ A ++  +    G  PD      LI     +G+    +  +++
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM-AVFK 354

Query: 266 D---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           D   + +    +L N++++ L   G I  A  L+  M +   +                P
Sbjct: 355 DGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL----------------P 398

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  +++++IN L K G +  A  L  +    GC  ++F YN LIDG C   +L+ + E++
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M   G  P   T N++   LC+       + + + M  +G  P +    +++  LCK 
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVA 501
            K  EA   L +M  +G  PD+V +     G   I  +D A +LFR +   +  C     
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YNII+S   +   +  A  LF+ M   G  P   TY ++I+G+CK GNI Q    L   +
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM 638

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           EK    P + T+  +++ LC+  +  +A+ + + M +KG  P  + 
Sbjct: 639 EKRF-IPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 141/608 (23%), Positives = 257/608 (42%), Gaps = 105/608 (17%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S    AR  A LR+L +++ +  C  +  A   ++  L   G  + A  LFD++    
Sbjct: 153 IKSFCKTARPYAALRLL-RNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARC 211

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LC P+  ++N L+  LCK   V   E  L ++   G   + +T    +Q  C  G  D+A
Sbjct: 212 LC-PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA 270

Query: 121 L---------SVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           +             ++++ G+  D+  ++ ++  + K G V  A  +++       + +E
Sbjct: 271 VRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+C LI+GF K    D+A+ +F      G      +Y+ +I GL +   +  ALQL +E
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNE 390

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M  +G  P+                       IW      T  L+ N + ++    G + 
Sbjct: 391 MAENGCLPN-----------------------IW------TYNLVINGLCKM----GCVS 417

Query: 291 QAYNLLQ-AMIKGEPIA-----------------DVGVEML-MIFKGTVSPNTSSFDIII 331
            A +L+  A+ KG P                   D   EM+  ++   ++P+  +++ ++
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N L K GK +  + +F+ M + GC  N+  YN ++D LC + ++ E+ +LL EM+  G K
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------------------------- 423
           P   +  ++F   C+  D+ GA  L R+M  Q                            
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597

Query: 424 --------GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                   G +P      ++I   CK G   + ++FL + +++ F+P +  +   +  L 
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLC 657

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              +V  A+ +   +   G  P+ V  N I     K   VA  + L  +++ KG I +  
Sbjct: 658 VKDKVHEAVGIIHLMLQKGIVPETV--NTIFEADKKV--VAAPKILVEDLLKKGHI-AYY 712

Query: 536 TYNLLING 543
           TY LL +G
Sbjct: 713 TYELLYDG 720


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 285/618 (46%), Gaps = 56/618 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF  +  +GL  P+  + N LL +L K+  V +       M   G   D Y  + ++  +
Sbjct: 149 LFSLLANKGL-FPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ D A+ +F ++   G     V ++ ++    K G +D+A +  E+M+   ++ + 
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ VLI+G VK  R D+A  +  +M+  G+A +  +Y+ +I G C+   +  ALQ+  +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M  +GI+P+                                 ++ CNS+++    +  ++
Sbjct: 328 MISNGISPN---------------------------------SVTCNSLIQGYCKSNQME 354

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A +LL+ M+ G  + + G                +F  +I+ L    + D AL    EM
Sbjct: 355 HAEHLLEEMLTGGGVINQG----------------TFTSVIHRLCLKCRFDSALLFIMEM 398

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                  N  L   L+ GLC + +  E+ EL   + E GF     T N++   LC     
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 411 VGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             A  L+++M  +G     + +NTL++   CK GK  E F+   +MV+ G  PD+  Y+ 
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILA-CCKEGKVEEGFKLKEEMVRRGIQPDMYTYNM 517

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + GL ++ +++ A  L+ +   +G  PD   Y I+I G CKA RV E E LF EM+T  
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV-ITYTTLIDGLCIAGRPDD 588
           +  +   Y  LI  +C++GN+ +A      M  +  G P    TY++LI GL   G  D 
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDM--RSRGIPQTSATYSSLIHGLSNIGLVDS 635

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  L +EM ++G +PN + + ALI G CK  +        + M    + P+   +  +I+
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695

Query: 649 AFLSELNPPLAFEVLKEM 666
                 N   A ++L EM
Sbjct: 696 GHCKLGNMKAAAKLLNEM 713



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 263/548 (47%), Gaps = 23/548 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G ++EA    +++++E +  P+  +Y  L+  L K    D     LKEM D 
Sbjct: 238 IIHGLCKNGRLDEAFQFKEKMEKERV-KPSLVTYGVLINGLVKLERFDEANCILKEMSDR 296

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKA 154
           G+  +      L+  YC  G    AL + +++I +G     V  + L+  + K  +++ A
Sbjct: 297 GYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHA 356

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+E M      +N+ TF  +IH    K R D AL    +M    F  +  +  +++ G
Sbjct: 357 EHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG 416

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNT 271
           LC+N +   A++L+  +   G   +    + LI    + G   E   L+KE+ E R +  
Sbjct: 417 LCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE-RGLVL 475

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++  N+++      G +++ + L + M++               +G + P+  ++++++
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVR---------------RG-IQPDMYTYNMLL 519

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L   GK++ A  L+ E  + G   + + Y  +IDG C +NR+EE  +L +EM     +
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE 579

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                  ++ R  C   ++  A  L   MR +G        + LI  L   G    A + 
Sbjct: 580 QNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQL 639

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M +EG  P++VCY+A IGG   + ++     + +++  +   P+ + Y I+I+G CK
Sbjct: 640 LDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCK 699

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              +  A  L NEM  KG++P   TYN L NG+CK G +++A L +  ++     S D I
Sbjct: 700 LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA-LKVCDLMSTGGISLDDI 758

Query: 572 TYTTLIDG 579
           TYTTLIDG
Sbjct: 759 TYTTLIDG 766



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 217/479 (45%), Gaps = 19/479 (3%)

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
            +LF  +   G        + ++  L K  +++M+ Q++  M   G+TPD  + S ++ +
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 250 CSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
               G +   ++     E   V    +  N+I+  L  NG +D+A+   + M K      
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER---- 262

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                       V P+  ++ ++IN L+K  + D A  + +EM+  G   N  +YN LID
Sbjct: 263 ------------VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLID 310

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C    +  + ++  +M  +G  P   T NS+ +  C+   +  A +L+ +M   G   
Sbjct: 311 GYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVI 370

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                T +I  LC   +   A  F+ +M+   F P+    +  + GL    +   A+EL+
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELW 430

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G   + V  N +I GLC+A    EA  L  EM+ +GL+    +YN LI   CK 
Sbjct: 431 YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G +++       M+ +    PD+ TY  L+ GLC  G+ ++A  LW+E ++ G  P+  T
Sbjct: 491 GKVEEGFKLKEEMV-RRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYT 549

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +I G CK +R       F+ M    ++ +  V+  LI A+    N   AF +  +M
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDM 608



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 1/337 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           + +T  K     +   LF  +   G   ++   N L+  L  +N ++ SY++   M   G
Sbjct: 133 VYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCG 192

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P  +  ++M    C    V  A+ L RKM   G  P V     +I  LCK+G+  EAF
Sbjct: 193 VTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAF 252

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           +F   M +E   P +V Y   I GL+ ++R D A  + +++   G  P+ V YN +I G 
Sbjct: 253 QFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+   ++ A  + ++MI+ G+ P+  T N LI G+CKS  ++ A   L  ML    G  +
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTG-GGVIN 371

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
             T+T++I  LC+  R D A++   EM  +   PN      L++GLC+  +   A+  + 
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + EKG   +     ALI       +   A ++LKEM
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM 468


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 264/585 (45%), Gaps = 52/585 (8%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  + +AL     +  +   L +M+  G+  + Y+   L+ +   SG   +AL V+  +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G       +S L+VA  K  + +    L++ M+D  +R N  TF + I    +  ++
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D+A ++F +M   G   D   Y V+I  LC   QLE A +L+ +MK +G  PD  I   L
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +   +D G+L    KE W   + +                                    
Sbjct: 339 LDKFNDFGDLDTF-KEFWSQMEADGYM--------------------------------- 364

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                          P+  +F I+++ L K    D A + F  M + G + N+  YN LI
Sbjct: 365 ---------------PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            GL  + R+E++ +LL  ME  G +PT +T N       +  +   A+    KM+ +G  
Sbjct: 410 CGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIV 469

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +      +  L + G+  EA      + + G  PD V Y+  +     + +VD A+ L
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             ++  +GC PDV+  N +I  L KA RV EA  +F+ M    L P+V TYN L++G  K
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G + +A+     M+EK+  SP+ I++ TL+D  C     + A+ ++++M    C P+ +
Sbjct: 590 EGRVQKAIELFESMIEKKC-SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           T+  +I GL K ++   A   F  +K K M PD      L+   +
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLV 692



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 168/626 (26%), Positives = 299/626 (47%), Gaps = 24/626 (3%)

Query: 28   MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A  +   I   G  G   +A   F+++K +G+ VPN  + N  L +L +   +   
Sbjct: 433  VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREA 491

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            +     +++ G   D  T   +++ Y   GQ D+A+++ +E+I +G   D  V + L+ +
Sbjct: 492  KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              K G VD+A ++ +RM D  +     T+  L+ G  K+ RV KA++LF+ M +   + +
Sbjct: 552  LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
               ++ ++   CKN ++E+AL+++S+M      PD    + +I           L+KE  
Sbjct: 612  TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG---------LIKE-- 660

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-VGVEMLMIFKGTVSPN 323
                VN      + + + +  +        LL  ++K   I D + +    +++     N
Sbjct: 661  --NKVNHAFWFFHQLKKSMHPDHVT--ICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 324  TSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYELL 382
             S ++ ++   L + ++D A+    E+   G C ++ FL   L+  LC   R   +Y++ 
Sbjct: 717  RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIF 775

Query: 383  REMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +  +  G  PT  + N +   L        A +L + M+  G  P      +L+    K
Sbjct: 776  DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGK 835

Query: 442  HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             GK  E F    +M+     PD + Y+  I  L     +D AL+ F D+ +    P    
Sbjct: 836  SGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895

Query: 502  YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            Y  +I GL K  R+ EA  LF EM   G  P+ A +N+LING+ K G+ + A     RM+
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955

Query: 562  EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
              E   PD+ +YT L+D LC+AGR D+A+  +NE++  G  P+ I +  +I GL K  R 
Sbjct: 956  -NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 622  RAALVHFRMMKEKGMKPDMFVFVALI 647
              AL  +  M+ +G+ PD++ + +L+
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLM 1040



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 172/646 (26%), Positives = 281/646 (43%), Gaps = 57/646 (8%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L  +G + EA  +F+ ++  GL  P++ +YN +++   K   VD     L EM   G   
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLA-PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     +G+ D+A  +F+ + D       V ++ LL    K G V KA EL 
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M +     N  +F  L+  F K   V+ AL++F KMT      D   Y+ +I GL K 
Sbjct: 601  ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEI------------ 263
             ++  A   + ++K S + PD   +  L+     C   G+   + ++             
Sbjct: 661  NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 264  WEDRDVNTMT-------------LLCNSI----------MRILVSNGSIDQAYNLLQAMI 300
            WED    T+              L+ N I          +R+L  +     AY +     
Sbjct: 720  WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFT 779

Query: 301  KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            K               K  +SP  +S++ +I  LL+    + A  LF++M  +GC  + F
Sbjct: 780  K---------------KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             +N L+     S ++ E +EL +EM     KP   T N +   L +  ++  AL+    +
Sbjct: 825  TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                  P  +    LI  L K G+  EA R   +M   G  P+   ++  I G   I   
Sbjct: 885  VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944

Query: 481  DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            + A +LF+ +   G  PD+ +Y I++  LC A RV EA   FNE+ + GL P    YN +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 541  INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            ING  KS  +++A L L   +      PD+ TY +L+  L +AG  + A  ++ E++  G
Sbjct: 1005 INGLGKSQRMEEA-LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 601  CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
              P+  T+ ALI G    + P  A   ++ M   G  P++  +  L
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 245/556 (44%), Gaps = 53/556 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G   EA  ++ ++  EGL  P+  +Y+ L+ AL K    ++V + LKEM+D 
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGL-KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   + YT T  ++V   +G+ D+A  +F  + D G   D   +++L+ A    G+++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  +M     + ++  +  L+  F     +D   + + +M   G+  D   + +++  
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK +  + A   +  M+  GI P+    +                            TL
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYN----------------------------TL 408

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           +C      L+  G I+ A  LL  M        VGV+          P   +++I I+  
Sbjct: 409 ICG-----LLRAGRIEDALKLLGTM------ESVGVQ----------PTAYTYNIFIDYF 447

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+   A+  F +M   G + N+   N  +  L    RL E+  +   + E+G  P  
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N M +C  +   V  A+NL+ +M   G EP V     LI  L K G+  EA++    
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M      P +V Y+  + GL    RV  A+ELF  +    C P+ +++N ++   CK   
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDE 627

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V  A  +F++M      P V TYN +I G  K   ++ A     ++  K+S  PD +T  
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL--KKSMHPDHVTIC 685

Query: 575 TLIDGLCIAGRPDDAI 590
           TL+ GL   G+  DAI
Sbjct: 686 TLLPGLVKCGQIGDAI 701



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 240/538 (44%), Gaps = 22/538 (4%)

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +V+    + E M    IR +  T+  +      +  + +   + +KM K+GF  +A  Y+
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD--EGELTLLVKEIWEDR 267
            +I  L ++     AL++Y  M   G+ P  +  S L+ +     + E+ +++ +  ED 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------IKGEPIADVGV---- 310
            +          +R+L   G ID+AY + + M             +  + + + G     
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 311 -EMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
            E+ +  K     P+   +  +++     G LD     + +M   G M +V  +  L+D 
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC +   +E++     M + G  P   T N++   L R   +  AL L+  M   G +P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                + I    K G+  +A      M  +G +P+IV  +A++  L ++ R+  A  +F 
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +  +G  PD V YN+++    K  +V EA +L +EMI  G  P V   N LI+   K+G
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            +D+A     RM + +  SP V+TY TL+ GL   GR   AI L+  M EK C+PN I+F
Sbjct: 557 RVDEAWQMFDRMKDMKL-SPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISF 615

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L+   CK D    AL  F  M     KPD+  +  +I   + E     AF    ++
Sbjct: 616 NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 251/561 (44%), Gaps = 36/561 (6%)

Query: 28   MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            +SP  + +  L+  LG  G V++A  LF+ +  E  C PN  S+N LL+  CK+  V+L 
Sbjct: 573  LSPTVVTYNTLLSGLGKEGRVQKAIELFESMI-EKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
                 +M       D  T   ++       + + A   F+++      D      LL   
Sbjct: 632  LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGL 691

Query: 146  SKWGEVDKACELI-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G++  A  +  + M     R+N   +  L+ G + ++ +DKA+   +++  +G   +
Sbjct: 692  VKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRE 751

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGEL--TLLVK 261
             +    ++  LCK+K+   A Q++ +  K  GI+P     + LI      GEL      +
Sbjct: 752  DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI------GELLEVHYTE 805

Query: 262  EIWE-DRDVNTM-----TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
            + W+  +D+  +         N ++ +   +G I + + L + MI               
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------------ 853

Query: 316  FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                  P+  +++I+I++L K   LD AL  F ++           Y  LIDGL    RL
Sbjct: 854  ----CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 376  EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            EE+  L  EM + G KP     N +     +  D   A  L ++M  +G  P +K  T+L
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 436  IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
            +  LC  G+  EA  +  ++   G  PD + Y+  I GL   +R++ AL L+ ++   G 
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 496  CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             PD+  YN ++  L  A  V +A+ ++ E+   GL P V TYN LI G+  S N + A  
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 556  CLSRMLEKESGSPDVITYTTL 576
                M+  +  +P++ TY  L
Sbjct: 1090 VYKNMM-VDGCNPNIGTYAQL 1109



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 1/348 (0%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           TV   T + + ++  L    K++   ++F  M +    +++  Y  +   L     L + 
Sbjct: 117 TVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQM 176

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             +L +M ++GF    ++ N +   L +      AL + R+M  +G +P +K  + L+  
Sbjct: 177 TTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVA 236

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L K   +      L +M   G  P++  ++  I  L    ++D A E+FR +   GC PD
Sbjct: 237 LGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPD 296

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V Y ++I  LC A ++  A++LF +M   G  P    Y  L++ +   G++D      S
Sbjct: 297 LVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS 356

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M E +   PDV+T+T L+D LC A   D+A   ++ M ++G  PN  T+  LI GL + 
Sbjct: 357 QM-EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R   AL     M+  G++P  + +   I  F        A E  ++M
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 189/735 (25%), Positives = 328/735 (44%), Gaps = 134/735 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  LG    +E    L  +++  GL  PN Y++   +  L ++  +D     LK M D 
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGL-RPNIYTFTICIRILGRAGKIDEAYGILKRMDDA 291

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVF-------------------NEIIDHG----- 131
           G G D  T T L+   CN+G+ + A  +F                   ++  DHG     
Sbjct: 292 GCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAI 351

Query: 132 ---WV---------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
              W          D   F+IL+ A  K G+VD+A   ++ M    +  N  T+  LI G
Sbjct: 352 KEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICG 411

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            ++ +R+D+AL+LF+ M   G  + A  Y + I    K+ +   A++ + +MK +GI P+
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471

Query: 240 FEILSKLITSCSDEGELTLLVKEIW----------------------------------- 264
               +  + S +++G L    KE +                                   
Sbjct: 472 IVACNASLYSLAEQGRLE-EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530

Query: 265 ---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------IADVG-- 309
              E+   +   ++ NS++  L     +D+A+ + Q M  +K  P        +A +G  
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKE 590

Query: 310 ---VEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
               E   +FKG ++    PNT SF+ +++ L K+G++DLAL +   MT++ C  +V  Y
Sbjct: 591 GRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTY 650

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-- 420
           N +I GL   NR+  ++ L  +M++  + P + TL ++   + +   +  A  + ++   
Sbjct: 651 NTVIYGLIKENRVNYAFWLFHQMKKVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVH 709

Query: 421 RVQGH---------------EPWVKHNTL-------------------LIKELCKHGKAM 446
            V  H               E  +  + L                   L+K LCKHGKA+
Sbjct: 710 HVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAV 769

Query: 447 EAFRFLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +A+     + +     P +  Y++ I GL+  +  ++A  LF  +   GC PDV  YN+ 
Sbjct: 770 DAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLF 829

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           +  L K+ ++ E  DL+ EM+ +G  P+  T+N++I G  KS ++D+A+     ++  + 
Sbjct: 830 LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            SP   TY  LIDGL   GR ++A   + EM + GC PN   +  L+ G  K      A 
Sbjct: 890 -SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948

Query: 626 VHFRMMKEKGMKPDM 640
             FR M ++G++PD+
Sbjct: 949 ELFRRMVKEGIRPDL 963



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 187/760 (24%), Positives = 336/760 (44%), Gaps = 134/760 (17%)

Query: 37   IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
            IR LG  G ++EA  +  ++   G C P+  +Y  L++ALC +  ++  +    +M+   
Sbjct: 269  IRILGRAGKIDEAYGILKRMDDAG-CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASS 327

Query: 97   WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
               D+ T   LL  + + G  D     ++E+   G++ + V F+IL+ A  K G+VD+A 
Sbjct: 328  HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF 387

Query: 156  ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
              ++ M    +  N  T+  LI G ++ +R+D+AL+LF+ M   G  + A  Y + I   
Sbjct: 388  GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447

Query: 216  CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW----------- 264
             K+ +   A++ + +MK +GI P+    +  + S +++G L    KE +           
Sbjct: 448  GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEE-AKEFFNGLKKCGLAPD 506

Query: 265  ---------------------------EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
                                       E+   +   ++ NS++  L     +D+A+ + Q
Sbjct: 507  AITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQ 566

Query: 298  AM--IKGEP--------IADVG-----VEMLMIFKGTVS----PNTSSFDIIINTLLKDG 338
             M  +K  P        +A +G      E   +FKG ++    PNT SF+ +++ L K+G
Sbjct: 567  RMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNG 626

Query: 339  KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            ++DLAL +   MT++ C  +V  YN +I GL   NR+  ++ L  +M++  + P + TL 
Sbjct: 627  EVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY-PDYVTLC 685

Query: 399  SMFRCLCRRQDVVGALNLVRKM--RVQGH---------------EPWVKHNTL------- 434
            ++   + +   +  A  + ++    V  H               E  +  + L       
Sbjct: 686  TLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVC 745

Query: 435  ------------LIKELCKHGKAMEAFRFLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVD 481
                        L+K LCKHGKA++A+     + +     P +  Y++ I GL+  +  +
Sbjct: 746  NTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTE 805

Query: 482  LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            +A  LF  +   GC PDV  YN+ +  L K+ ++ E  DL+ EM+ +G  P+  T+N++I
Sbjct: 806  MAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI 865

Query: 542  NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
             G  KS ++D+A+     ++  +  SP   TY  LIDGL   GR ++A   + EM + GC
Sbjct: 866  FGLVKSNSLDKAIDLYYDLMSGDF-SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924

Query: 602  APNRITFMALITG-----------------------------------LCKCDRPRAALV 626
             PN   +  L+ G                                   LC   +   AL 
Sbjct: 925  MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984

Query: 627  HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +F  +K  G+ PD+  +  +I+          A  +  EM
Sbjct: 985  YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/638 (27%), Positives = 298/638 (46%), Gaps = 44/638 (6%)

Query: 25   RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
            +C ++P A+ +  L+RC G  G V++A  L  +++  G C P     N L++ L K+  V
Sbjct: 500  KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG-CDPEVVIINSLIDTLYKADRV 558

Query: 83   DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSIL 141
            D      + M++        T   LL      G+  +A ++F  +I D    +   F+ L
Sbjct: 559  DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618

Query: 142  LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
            L    K GEVD A +++ RM + N   +  T+  +I+G +K++RV+ A  LF +M K  +
Sbjct: 619  LDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY 678

Query: 202  ASDAAMYDVIIGGLCKNKQLEMALQLYSE-MKGSGITPDFEILSKLITSCSDEGEL--TL 258
              D      ++ G+ K+ ++E A ++  E +   G   D      L+     E E+  ++
Sbjct: 679  P-DYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI 737

Query: 259  LVKEIWEDRDVNTMTLLCNSI----------MRILVSNGSIDQAYNLLQAMIKGEPIADV 308
            L  E          +L+CN+I          ++ L  +G    AYN+   + K       
Sbjct: 738  LFAE----------SLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTK------- 780

Query: 309  GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                       ++P+  +++ +I+ LLK    ++A  LF +M   GC  +VF YN  +D 
Sbjct: 781  --------SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDA 832

Query: 369  LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            L  S +++E ++L  EM   G KP   T N +   L +   +  A++L   +      P 
Sbjct: 833  LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPT 892

Query: 429  VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                  LI  L K G+  EA +F  +M+  G +P+   Y+  + G      V+ A ELFR
Sbjct: 893  PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFR 952

Query: 489  DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
             +   G  PD+ +Y+I++  LC   +V +A   F E+   GL P +  YNL+ING  +S 
Sbjct: 953  RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012

Query: 549  NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
             +++A+     M  +   +PD+ TY  LI  L IAG  ++A  ++ E++ KG  PN  T+
Sbjct: 1013 RVEEALSLFDEMRNR-GITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071

Query: 609  MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             ALI G      P  A   ++ M   G +P+   F  L
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/553 (28%), Positives = 262/553 (47%), Gaps = 34/553 (6%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSK 147
           L++M+  G+  + Y+   L+ +   SG   +AL V+  ++  G       +S L+VA  K
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             +++    L++ M+   +R N  TF + I    +  ++D+A  +  +M  +G   D   
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED- 266
           Y V+I  LC   +L  A +L+ +MK S   PD      L+   SD G+L   +KE W + 
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDA-IKEFWSEM 358

Query: 267 ------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
                  DV T T+L +++ ++    G +D+A+  L  M K                  V
Sbjct: 359 EADGYLPDVVTFTILIDALCKV----GKVDEAFGTLDVMKKQ----------------GV 398

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +PN  +++ +I  LL+  +LD AL LF  M  +G     + Y   ID    S    ++ +
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
              +M+ +G  P     N+    L  +  +  A      ++  G  P      +L++   
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  +A + L++M + G  P++V  ++ I  L    RVD A ++F+ +      P VV
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +++GL K  RV EA  LF  MI     P+  ++N L++  CK+G +D A+  L RM
Sbjct: 579 TYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM 638

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            E     PDV+TY T+I GL    R + A  L+++M +K   P+ +T   L+ G+ K  R
Sbjct: 639 TEMNC-FPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGR 696

Query: 621 PRAALVHFRMMKE 633
              A   FR+ KE
Sbjct: 697 IEDA---FRVAKE 706



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 295/635 (46%), Gaps = 30/635 (4%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L   G +EEA   F+ +K+ GL  P+  +YN L+    K+  VD     L EM++ G   
Sbjct: 482  LAEQGRLEEAKEFFNGLKKCGLA-PDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDP 540

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            +   +  L+     + + D+A  +F  + +       V ++ LL    K G V +A  L 
Sbjct: 541  EVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600

Query: 159  ERM--DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            + M  DDC    N  +F  L+    K   VD AL++  +MT+     D   Y+ +I GL 
Sbjct: 601  KGMIADDCPP--NTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLI 658

Query: 217  KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMT 273
            K  ++  A  L+ +MK   I PD+  L  L+     +G +     + KE       +   
Sbjct: 659  KENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADG 717

Query: 274  LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                 +M  ++    I Q+    ++++                  T+  + S    ++  
Sbjct: 718  SFWEDLMGGILIEAEIGQSILFAESLVCN----------------TICEDDSVLIPLVKF 761

Query: 334  LLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K GK   A ++F ++T+  C+  ++  YN+LIDGL  +   E ++ L  +M+ +G  P
Sbjct: 762  LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 393  THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              FT N     L +   +    +L  +M  +G +P    + ++I  L K     +A    
Sbjct: 822  DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 453  TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             D++   F P    Y   I GL+ + R++ A + F ++  +GC P+   YNI+++G  K 
Sbjct: 882  YDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941

Query: 513  QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVI 571
              V  A +LF  M+ +G+ P + +Y+++++  C  G +D A+     +  K SG  PD++
Sbjct: 942  GDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL--KLSGLDPDLV 999

Query: 572  TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
             Y  +I+GL  + R ++A+ L++EM  +G  P+  T+ ALI  L        A   +  +
Sbjct: 1000 CYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEEL 1059

Query: 632  KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + KG++P++F + ALI       NP  A+ V K+M
Sbjct: 1060 QLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 236/536 (44%), Gaps = 31/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +F +L +     G + +A   +E+M      LN  ++  LIH  +K     +AL+++ +M
Sbjct: 163 IFKVLYIR----GGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y  ++  L K + +E  + L  EM+  G+ P+   F I  +++      
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 254 GELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   ++K + +     DV T T+L ++    L + G ++ A  L               
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDA----LCNAGKLNNAKELF-------------- 320

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
             L +   +  P+  ++  +++     G LD     + EM   G + +V  +  LID LC
Sbjct: 321 --LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALC 378

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              +++E++  L  M++ G  P   T N++   L R   +  AL L   M   G E    
Sbjct: 379 KVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAY 438

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              L I    K G++ +A +    M   G +P+IV  +A++  L +  R++ A E F  +
Sbjct: 439 TYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL 498

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PD + YNI++    KA RV +A  L +EM   G  P V   N LI+   K+  +
Sbjct: 499 KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRV 558

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A     RM E +  +P V+TY TL+ GL   GR  +A  L+  M    C PN I+F  
Sbjct: 559 DEAWKMFQRMKEMKL-APTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+  LCK      AL     M E    PD+  +  +I   + E     AF +  +M
Sbjct: 618 LLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 168/672 (25%), Positives = 284/672 (42%), Gaps = 61/672 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV-----EMR-- 88
           LI  L   G   EA  ++ ++  EG+  P+  +Y+ L+ AL K   ++ V     EM   
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGI-KPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 89  ----------------------------LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
                                       LK M D G G D  T T L+   CN+G+ + A
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316

Query: 121 LSVFNEIIDHGWVDEHVFSI-LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F ++       + V  I LL  FS  G++D   E    M+      +  TF +LI  
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K  +VD+A    D M K G A +   Y+ +I GL +  +L+ AL+L++ M+  G+   
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETT 436

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNGSIDQAYNLL 296
                  I      GE    +K  +E    N +    + CN+ +  L   G +++A    
Sbjct: 437 AYTYILFIDYYGKSGESGKAIK-TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             +                 K  ++P+  +++I++    K G++D A+ L  EM + GC 
Sbjct: 496 NGLK----------------KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCD 539

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             V + N+LID L  ++R++E++++ + M+E    PT  T N++   L +   V  A  L
Sbjct: 540 PEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATAL 599

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            + M      P       L+  LCK+G+   A + L  M +    PD++ Y+  I GLI 
Sbjct: 600 FKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIK 659

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVA 535
             RV+ A  LF  +      PD V    ++ G+ K  R+ +A  +  E +   G     +
Sbjct: 660 ENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGS 718

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            +  L+ G      I Q++L    ++       D +    L+  LC  G+  DA  ++ +
Sbjct: 719 FWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVL-IPLVKFLCKHGKAVDAYNVFLK 777

Query: 596 MEEKGC-APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           + +  C  P+   + +LI GL K      A   F  MK  G  PD+F +   + A     
Sbjct: 778 LTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSG 837

Query: 655 NPPLAFEVLKEM 666
                F++ +EM
Sbjct: 838 KIKELFDLYEEM 849



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 235/547 (42%), Gaps = 58/547 (10%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
            L+  LG  G V+EA  LF  +  +  C PN  S+N LL+ LCK+  VDL    L  M + 
Sbjct: 583  LLAGLGKEGRVQEATALFKGMIADD-CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM 641

Query: 95   -------------YG-----------WGY---------DKYTLTPLLQVYCNSGQFDKAL 121
                         YG           W +         D  TL  LL      G+ + A 
Sbjct: 642  NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAF 701

Query: 122  SVFNEIIDH--GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             V  E + H     D   +  L+       E+ ++    E +    I  ++     L+  
Sbjct: 702  RVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKF 761

Query: 180  FVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K  +   A  +F K+TKS         Y+ +I GL K +  EMA  L+ +MK +G TP
Sbjct: 762  LCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 239  DFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            D    +  + +    G++  L  +++E+   R     T+  N ++  LV + S+D+A +L
Sbjct: 822  DVFTYNLFLDALGKSGKIKELF-DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880

Query: 296  LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               ++ G+                 SP   ++  +I+ LLK G+L+ A   F EM   GC
Sbjct: 881  YYDLMSGD----------------FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924

Query: 356  MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
            M N  LYN L++G      +E + EL R M + G +P   + + M  CLC    V  AL+
Sbjct: 925  MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984

Query: 416  LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
               ++++ G +P +    L+I  L +  +  EA     +M   G  PD+  Y+A I  L 
Sbjct: 985  YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044

Query: 476  DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
                V+ A +++ ++   G  P+V  YN +I G   +     A  ++ +M+  G  P+  
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTG 1104

Query: 536  TYNLLIN 542
            T+  L N
Sbjct: 1105 TFAQLPN 1111



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 185/403 (45%), Gaps = 23/403 (5%)

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ---AYNLLQ 297
           E + +++ S SD  +       + E   V   T  CN ++ +L ++  ++     +NL+Q
Sbjct: 90  EEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQ 149

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
             I                   +  + +++  I   L   G L  A     +M ++G + 
Sbjct: 150 KQI-------------------IKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVL 190

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N + Y  LI  L  S    E+ ++ R M   G KP+  T +++   L +R+D+   + L+
Sbjct: 191 NGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLL 250

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           ++M   G  P +   T+ I+ L + GK  EA+  L  M   G  PD+V Y+  I  L + 
Sbjct: 251 QEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNA 310

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +++ A ELF  + A    PD V Y  ++        +   ++ ++EM   G +P V T+
Sbjct: 311 GKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTF 370

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            +LI+  CK G +D+A   L  M +K+  +P++ TY TLI GL    R D+A+ L+N ME
Sbjct: 371 TILIDALCKVGKVDEAFGTLDVM-KKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSME 429

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             G      T++  I    K      A+  F  MK  G+ P++
Sbjct: 430 SLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 135/289 (46%), Gaps = 1/289 (0%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +++ L    R+E+   +   M++   K +  T  ++F+ L  R  +  A   + KMR 
Sbjct: 126 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 185

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G          LI  L K G   EA +    MV EG  P +  YSA +  L   + ++ 
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            + L +++ + G  P++  + I I  L +A ++ EA  +   M   G  P V TY +LI+
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C +G ++ A     +M +  S  PD +TY TL+D     G  D     W+EME  G  
Sbjct: 306 ALCNAGKLNNAKELFLKM-KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYL 364

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           P+ +TF  LI  LCK  +   A     +MK++G+ P++  +  LI   L
Sbjct: 365 PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLL 413


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 275/599 (45%), Gaps = 59/599 (9%)

Query: 53  FDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           ++++ R G     P+  +Y  L+   C++  +DL    L  +   G+  D    TPLL+ 
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 111 YCNSGQFDKALS-VFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDD---C 164
            C   +   A+  V   + + G +  +VFS  ILL          +A EL+  M D    
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  ++  +I+GF K+   DKA   + +M   G   D   Y+ II  LCK + ++ A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           +++ + M  +G+ PD                                  +  NSI+    
Sbjct: 251 MEVLNTMVKNGVMPD---------------------------------CMTYNSILHGYC 277

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           S+G   +A   L+ M         GVE          P+  ++ ++++ L K+G+   A 
Sbjct: 278 SSGQPKEAIGFLKKMRSD------GVE----------PDVVTYSLLMDYLCKNGRCMEAR 321

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P H+  + +    
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            ++  V  A+ +  KMR QG  P       +I  LCK G+  +A  +   M+ EG  P  
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y++ I GL    + + A EL  ++   G C + + +N II   CK  RV E+E LF  
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P+V TYN LING+C +G +D+AM  LS M+      P+ +TY+TLI+G C   
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYCKIS 560

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E G + ++  +
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 267/564 (47%), Gaps = 45/564 (7%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+      D G G   D  + T ++  +   G  D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D G + + V ++ ++ A  K   +DKA E++  M    +  +  T+  ++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y +++  LCKN +   A +++  M   G+ 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSI 289
           P+      L+   + +G L        L+V+  I  D  V ++ L+C          G +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI-LIC-----AYAKQGKV 387

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           DQA  +   M                 +  ++PN  ++  +I  L K G+++ A+  F +
Sbjct: 388 DQAMLVFSKM----------------RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G      +YN+LI GLC  N+ E + EL+ EM + G        NS+    C+   
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V+ +  L   M   G +P V     LI   C  GK  EA + L+ MV  G  P+ V YS 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   I R++ AL LF+++ + G  PD++ YNII+ GL + +R A A++L+  +   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 530 LIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
               ++TYN++++G CK+   D A+     LCL  +        +  T+  +ID L   G
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL------KLEARTFNIMIDALLKVG 665

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
           R D+A  L+      G  PN  T+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTY 689



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 243/561 (43%), Gaps = 96/561 (17%)

Query: 181 VKKSRVDKALQLFDKMTKSG---FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           V +     A+  +++M ++G      D   Y ++IG  C+  +L++       +   G  
Sbjct: 60  VARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119

Query: 238 PDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--AYN 294
            D    + L+   C+D+             R  + M +    ++R +   G I    +YN
Sbjct: 120 VDAIAFTPLLKGLCADK-------------RTSDAMDI----VLRRMTELGCIPNVFSYN 162

Query: 295 LLQAMIKGEPIADVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +L   +  E  +   +E+L +      G   P+  S+  +IN   K+G  D A S + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + +V  YN++I  LC +  ++++ E+L  M ++G  P   T NS+    C     
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS-- 468
             A+  ++KMR  G EP V   +LL+  LCK+G+ MEA +    M + G  P+I  Y   
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 469 ----AAIGGLIDIK-----------------------------RVDLALELFRDICAHGC 495
               A  G L+++                              +VD A+ +F  +   G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
            P+ V Y  +I  LCK+ RV +A   F +MI +GL P    YN LI+G C     ++A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 555 ---------LCLS---------------RMLEKE---------SGSPDVITYTTLIDGLC 581
                    +CL+               R++E E            P+VITY TLI+G C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           +AG+ D+A+ L + M   G  PN +T+  LI G CK  R   ALV F+ M+  G+ PD+ 
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 642 VFVALISAFLSELNPPLAFEV 662
            +  ++           A E+
Sbjct: 583 TYNIILQGLFQTRRTAAAKEL 603



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 237/520 (45%), Gaps = 22/520 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  +YN +L   C S         LK+M+  G   D  T + L+   C +G+  +A  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  +   F +LI  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   +A  Y  +IG LCK+ ++E A+  + +M   G++P   
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 242 ILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           + + LI    +C+       L+ E+  DR +   T+  NSI+      G + ++  L + 
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M++      +GV+          PN  +++ +IN     GK+D A+ L   M  +G   N
Sbjct: 502 MVR------IGVK----------PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN 545

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y+ LI+G C  +R+E++  L +EME SG  P   T N + + L + +    A  L  
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           ++   G +  +    +++  LCK+    +A +   ++       +   ++  I  L+ + 
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R D A +LF    ++G  P+   Y ++   +     + E + LF  M   G        N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++    + G I +A   LS M++++  S +  T +  ID
Sbjct: 726 FIVRELLQRGEITRAGTYLS-MIDEKHFSLEASTASLFID 764



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 57/443 (12%)

Query: 28  MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A+  G +I  L   G VE+A + F+Q+  EGL  P N  YN L+  LC     +  
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERA 460

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
           E  + EM D G   +      ++  +C  G+  ++  +F  ++  G V  +V  ++ L+ 
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG-VKPNVITYNTLIN 519

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            +   G++D+A +L+  M    ++ N  T+  LI+G+ K SR++ AL LF +M  SG + 
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y++I+ GL + ++   A +LY  +  SG   +                        
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY-------------------- 619

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                        N I+  L  N   D A  + Q +     + D+ +E            
Sbjct: 620 -------------NIILHGLCKNKLTDDALQMFQNLC----LMDLKLE------------ 650

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +F+I+I+ LLK G+ D A  LF   +  G + N + Y  + + +     LEE  +L  
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            ME++G       LN + R L +R ++  A   +  M  + H         L  +L   G
Sbjct: 711 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGG 769

Query: 444 KAMEAFRFLTDMVQEGFLPDIVC 466
           K  E +RFL +  +  F+  + C
Sbjct: 770 KYQEYYRFLPEKYKS-FIESLSC 791



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y   IG      R+DL      ++   G   D +A+  ++ GLC  +R ++A D+
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 522 -FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYTTLID 578
               M   G IP+V +YN+L+ G C      +A+  L  M +   G   PDV++YTT+I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G    G  D A   ++EM ++G  P+ +T+ ++I  LCK      A+     M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   + +++  + S   P  A   LK+M
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKM 292


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 242/477 (50%), Gaps = 32/477 (6%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTM 272
           C    L  AL+L  EMK +G  PD    + +IT+ ++ G+L   +  +     D +V T 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEP--------IADVGVEMLMI-------- 315
           T L  +  R       +++A  LL+ M  +G P        + D   ++ M+        
Sbjct: 61  TALIAAFARA----KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 316 --FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G  +PN  +F+ +++   K G +D A  L   M   G   NV  Y+ LIDGLC S 
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +  E+ E+L EM+ SG  P  FT +++   LC+   +  A  ++R+M   G  P V   +
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I   CK GK +EA + L +M ++   PD+V Y+  I GL  + ++  A  +   +   
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296

Query: 494 G-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           G   PDVV Y+ +I+GLCK+  + EA+ L + M   G  P V TY  +I+G CK G +++
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 553 AMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           A   L  M  K +G +P+V+TYTTLI GLC A + D+A  +  EM   GC PN +T+  +
Sbjct: 357 AEYLLQGM--KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 414

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMK--PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + GLC   R + A    + MK+   +  PD   +  +++A +S      A ++L++M
Sbjct: 415 VNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 229/480 (47%), Gaps = 29/480 (6%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFS 146
           L+EM+  G+  D +T TP++    N+G  D A+     +      D +V  ++ L+ AF+
Sbjct: 13  LEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM----GCDPNVVTYTALIAAFA 68

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           +  ++++A +L+E M +     N  T+ VL+    K S V  A  +  KM + GFA +  
Sbjct: 69  RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            ++ ++ G CK   ++ A +L   M   G+ P+    S LI       +  L  KE+ E+
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF-LEAKEVLEE 187

Query: 267 RDVNTMT---LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              + +T      ++++  L     I++A  +L+ M      A  G           +P+
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM------AGSG----------CTPD 231

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              +  II+   K GKL  A    +EM +     +V  YN +IDGLC   ++ E+  +L 
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 384 EMEESG-FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           +M+ESG   P   T +++   LC+   +V A  L+ +M   G  P V   T +I  LCK 
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  EA   L  M + G  P++V Y+  I GL   ++VD A  +  ++   GC P++V Y
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411

Query: 503 NIIISGLCKAQRVAEAEDLFNEMI--TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           N +++GLC + R+ EA+ L   M        P  ATY  ++N    S  + +A   L +M
Sbjct: 412 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 209/481 (43%), Gaps = 62/481 (12%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
            D ++  G C PN  +Y  L+ A  ++  ++     L+EM++ G   +  T   L+   C
Sbjct: 45  MDHLRSMG-CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 103

Query: 113 NSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
                  A  V  ++I+ G+      F+ L+  F K G VD A +L+  M    +R N  
Sbjct: 104 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  LI G  K  +  +A ++ ++M  SG   DA  Y  +I GLCK  ++E A Q+   M
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVS 285
            GSG TPD  + S +I +    G+L    K + E R      DV T     N+++  L  
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTY----NTVIDGLCK 279

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G I +A  +L  M +                G V P+  ++  +IN L K   L  A  
Sbjct: 280 LGKIAEAQVILDQMQE---------------SGDVLPDVVTYSTVINGLCKSDMLVEAQK 324

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M + GC  +V  Y  +IDGLC   RLEE+  LL+ M+ +G  P   T  ++   LC
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           + + V  A  ++ +MR  G  P  V +NT ++  LC  G+  EA + +  M         
Sbjct: 385 KARKVDEAERVMEEMRNAGCPPNLVTYNT-MVNGLCVSGRIKEAQQLVQRM--------- 434

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                                  +D  A  C PD   Y  I++ L  +  V EAE L  +
Sbjct: 435 -----------------------KDGRAE-CSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470

Query: 525 M 525
           M
Sbjct: 471 M 471


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 267/604 (44%), Gaps = 84/604 (13%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +N L   L ++   DLV    K+M+  G  YD YTL  ++  +C   +   A S
Sbjct: 87  LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFS 146

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +I   G+                                    N  TF  L++G   
Sbjct: 147 AMGKIFKLGY----------------------------------EPNTVTFNTLLNGLCL 172

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + RV +A++L D M  S    D    + I+ GLC   ++  A+ L + M  +G  P    
Sbjct: 173 EGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQP---- 228

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                      N  T     I+  +  +G+   A +LL+ M   
Sbjct: 229 ---------------------------NQFTY--GPILNRMCKSGNTASALDLLRKMEHR 259

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           +                + P+  ++ III+ L KDG+LD ALS F EM   G   NVF Y
Sbjct: 260 K----------------IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+LI   C+  R ++  +LLR+M      P   T +++   L +   +  A +L  +M  
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G EP       LI  LC   +  EA + +  MV +G  PDI  Y+  I G    K+VD 
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            + LFR +   G   D V Y+ +I G C+++++  A+ +F EM+++G+ P + TY +L++
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLD 483

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C +G +++A+  L +M  K     D+  Y  +I G+C A + DDA  L+  +  KG  
Sbjct: 484 GLCDNGELEEALGILDQM-HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            +  ++  +++GLCK      A   FR MKE G +PD   +  LI A L   +   + ++
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQL 602

Query: 663 LKEM 666
           ++EM
Sbjct: 603 IEEM 606



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 177/372 (47%), Gaps = 39/372 (10%)

Query: 316 FKGTVSPNT-SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           F G  S    SS+   + + L D K D A++LF+ M +   +  V  +N L   L  + +
Sbjct: 46  FSGLTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQ 105

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNT 433
            +    L ++ME  G     +TLN M  C CRR+ +  A + + K+   G+EP  V  NT
Sbjct: 106 YDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNT 165

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           LL   LC  G+  EA   +  MV    +PD++  +  + GL    RV  A++L   + A+
Sbjct: 166 LL-NGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN 224

Query: 494 GCCPD-----------------------------------VVAYNIIISGLCKAQRVAEA 518
           GC P+                                   VV Y III  LCK  R+ +A
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              F+EM TKG+  +V TYN LI  +C  G  D     L  M+ ++  +P+V+T++ LID
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI-TPNVVTFSALID 343

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            L   G+  +A  L+NEM  +G  PN IT+ +LI GLC   R   A     +M  KG  P
Sbjct: 344 SLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDP 403

Query: 639 DMFVFVALISAF 650
           D++ +  LI+ F
Sbjct: 404 DIWTYNILINGF 415



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 222/522 (42%), Gaps = 74/522 (14%)

Query: 64  PNNYSYNCLLEALCKSC----SVDLVE-MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           PN  ++N LL  LC       +V+LV+ M L +        D  TL  ++   C   +  
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP-----DLITLNTIVNGLCLKDRVS 212

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           +A+ +   ++ +G   ++  +  +L    K G    A +L+ +M+   I+ +  T+ ++I
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
               K  R+D AL  F +M   G  ++   Y+ +IG  C   + +   QL  +M    IT
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           P+    S LI S   EG+LT   K+++ +   R +   T+  NS++  L ++  +D+A  
Sbjct: 333 PNVVTFSALIDSLVKEGKLTE-AKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391

Query: 295 LLQAMI-------------------KGEPIADVGVEML--MIFKGTVSPNTSSFDIIINT 333
           ++  M+                   K + + D G+ +   M  +G ++ +T ++  +I  
Sbjct: 392 MMDLMVSKGCDPDIWTYNILINGFCKAKQVDD-GMRLFRKMSLRGMIA-DTVTYSTLIQG 449

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             +  KL +A  +F+EM   G    +  Y  L+DGLC++  LEE+  +L +M +      
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK------ 503

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
                      C+ +  +G  N++                  I  +C   K  +A+    
Sbjct: 504 -----------CKMELDIGIYNII------------------IHGMCNANKVDDAWSLFC 534

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +  +G   DI  Y+  + GL     +  A  LFR +   G  PD   YN +I    +  
Sbjct: 535 SLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGN 594

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            +  +  L  EM   G     +T  ++++    SG +D++ L
Sbjct: 595 DITTSVQLIEEMKRCGFSSDASTVKIVMD-MLSSGELDKSFL 635



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 14/261 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EAN + D +  +G C P+ ++YN L+   CK+  VD      ++M   G   D  T +
Sbjct: 386 LDEANQMMDLMVSKG-CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+Q +C S +   A  VF E++  G       ++ILL      GE+++A  ++++M  C
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            + L+   + ++IHG    ++VD A  LF  +   G   D   Y++++ GLCK   L  A
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEA 564

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNS 278
             L+ +MK  G  PD    + LI +     ++T  V+ I E        D +T+ ++ + 
Sbjct: 565 DALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD- 623

Query: 279 IMRILVSNGSIDQAY-NLLQA 298
               ++S+G +D+++ N+L  
Sbjct: 624 ----MLSSGELDKSFLNMLSG 640


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 165/599 (27%), Positives = 274/599 (45%), Gaps = 59/599 (9%)

Query: 53  FDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           ++++ R G     P+  +Y  L+   C++  +DL    L  +   G+  D    TPLL+ 
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 111 YCNSGQFDKALS-VFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDD---C 164
            C   +   A+  V   + + G +  +VFS  ILL          +A EL+  M D    
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  ++  +I+GF K+   DKA   + +M   G   D   Y+ II  LCK + ++ A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           +++ + M  +G+ PD                                  +  NSI+    
Sbjct: 251 MEVLNTMVKNGVMPD---------------------------------CMTYNSILHGYC 277

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           S+G   +A   L+ M         GVE          P+  ++ ++++ L K+G+   A 
Sbjct: 278 SSGQPKEAIGFLKKMRSD------GVE----------PDVVTYSLLMDYLCKNGRCMEAR 321

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P H+  + +    
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
             +  V  A+ +  KMR QG  P       +I  LCK G+  +A  +   M+ EG  P  
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y++ I GL    + + A EL  ++   G C + + +N II   CK  RV E+E LF  
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P+V TYN LING+C +G +D+AM  LS M+      P+ +TY+TLI+G C   
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYCKIS 560

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E G + ++  +
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 268/564 (47%), Gaps = 45/564 (7%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+      D G G   D  + T ++  +   G  D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D G + + V ++ ++ A  K   +DKA E++  M    +  +  T+  ++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y +++  LCKN +   A +++  M   G+ 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSI 289
           P+      L+   + +G L        L+V+  I  D  V ++ L+C        + G +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI-LIC-----AYANQGKV 387

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           DQA  +   M                 +  ++PN  ++  +I  L K G+++ A+  F +
Sbjct: 388 DQAMLVFSKM----------------RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G      +YN+LI GLC  N+ E + EL+ EM + G        NS+    C+   
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V+ +  L   M   G +P V     LI   C  GK  EA + L+ MV  G  P+ V YS 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   I R++ AL LF+++ + G  PD++ YNII+ GL + +R A A++L+  +   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 530 LIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
               ++TYN++++G CK+   D A+     LCL  +        +  T+  +ID L   G
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL------KLEARTFNIMIDALLKVG 665

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
           R D+A  L+      G  PN  T+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTY 689



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 243/561 (43%), Gaps = 96/561 (17%)

Query: 181 VKKSRVDKALQLFDKMTKSG---FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           V +     A+  +++M ++G      D   Y ++IG  C+  +L++       +   G  
Sbjct: 60  VARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119

Query: 238 PDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--AYN 294
            D    + L+   C+D+             R  + M +    ++R +   G I    +YN
Sbjct: 120 VDAIAFTPLLKGLCADK-------------RTSDAMDI----VLRRMTELGCIPNVFSYN 162

Query: 295 LLQAMIKGEPIADVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +L   +  E  +   +E+L +      G   P+  S+  +IN   K+G  D A S + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + +V  YN++I  LC +  ++++ E+L  M ++G  P   T NS+    C     
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS-- 468
             A+  ++KMR  G EP V   +LL+  LCK+G+ MEA +    M + G  P+I  Y   
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 469 ----AAIGGLIDIK-----------------------------RVDLALELFRDICAHGC 495
               A  G L+++                              +VD A+ +F  +   G 
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
            P+ V Y  +I  LCK+ RV +A   F +MI +GL P    YN LI+G C     ++A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 555 ---------LCLS---------------RMLEKE---------SGSPDVITYTTLIDGLC 581
                    +CL+               R++E E            P+VITY TLI+G C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           +AG+ D+A+ L + M   G  PN +T+  LI G CK  R   ALV F+ M+  G+ PD+ 
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 642 VFVALISAFLSELNPPLAFEV 662
            +  ++           A E+
Sbjct: 583 TYNIILQGLFQTRRTAAAKEL 603



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 236/520 (45%), Gaps = 22/520 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  +YN +L   C S         LK+M+  G   D  T + L+   C +G+  +A  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  +   F +LI  + 
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            + +VD+A+ +F KM + G   +A  Y  +IG LCK+ ++E A+  + +M   G++P   
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 242 ILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           + + LI    +C+       L+ E+  DR +   T+  NSI+      G + ++  L + 
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M++      +GV+          PN  +++ +IN     GK+D A+ L   M  +G   N
Sbjct: 502 MVR------IGVK----------PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN 545

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y+ LI+G C  +R+E++  L +EME SG  P   T N + + L + +    A  L  
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           ++   G +  +    +++  LCK+    +A +   ++       +   ++  I  L+ + 
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R D A +LF    ++G  P+   Y ++   +     + E + LF  M   G        N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++    + G I +A   LS M++++  S +  T +  ID
Sbjct: 726 FIVRELLQRGEITRAGTYLS-MIDEKHFSLEASTASLFID 764



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 57/443 (12%)

Query: 28  MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A+  G +I  L   G VE+A + F+Q+  EGL  P N  YN L+  LC     +  
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERA 460

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
           E  + EM D G   +      ++  +C  G+  ++  +F  ++  G V  +V  ++ L+ 
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG-VKPNVITYNTLIN 519

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            +   G++D+A +L+  M    ++ N  T+  LI+G+ K SR++ AL LF +M  SG + 
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y++I+ GL + ++   A +LY  +  SG   +                        
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY-------------------- 619

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                        N I+  L  N   D A  + Q +     + D+ +E            
Sbjct: 620 -------------NIILHGLCKNKLTDDALQMFQNLC----LMDLKLE------------ 650

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +F+I+I+ LLK G+ D A  LF   +  G + N + Y  + + +     LEE  +L  
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            ME++G       LN + R L +R ++  A   +  M  + H         L  +L   G
Sbjct: 711 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGG 769

Query: 444 KAMEAFRFLTDMVQEGFLPDIVC 466
           K  E +RFL +  +  F+  + C
Sbjct: 770 KYQEYYRFLPEKYKS-FIESLSC 791



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y   IG      R+DL      ++   G   D +A+  ++ GLC  +R ++A D+
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 522 -FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYTTLID 578
               M   G IP+V +YN+L+ G C      +A+  L  M +   G   PDV++YTT+I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G    G  D A   ++EM ++G  P+ +T+ ++I  LCK      A+     M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   + +++  + S   P  A   LK+M
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKM 292


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 175/636 (27%), Positives = 306/636 (48%), Gaps = 40/636 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            L++EA  +++++   G+   +N +   L+ A  +    +      + +   G   D   
Sbjct: 218 NLIDEAKEIYNKMVLIGVA-GDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLL 276

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERM 161
            +  +Q  C       AL +  E+ + G V   +  ++ ++VA  K G +++A ++ + M
Sbjct: 277 FSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEM 336

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               I ++      LI GF   + + KAL  F++M + G A D  M+ V+I   CKN ++
Sbjct: 337 VGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEM 396

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTMT--LLCN 277
           E A+++Y  MK  GI P   ++ K+I  C  ++  E  L   EI+ D     +    +CN
Sbjct: 397 EKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAAL---EIFNDSFETWIAHGFMCN 453

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            I  +L   G +D A + L+ M       + G+E          PN   ++ ++    + 
Sbjct: 454 KIFLLLCKQGKVDAATSFLRMM------ENKGIE----------PNVVFYNNMMLAHCRM 497

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +DLA S+F EM + G   N F Y+ LIDG   +   + ++E++ +M  S F+      
Sbjct: 498 KNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIY 557

Query: 398 NSMFRCLCRRQDVVGA----LNLVRKMRVQGHEPWVKHNTLLIKELCKHG---KAMEAFR 450
           N++   LC+      A     NL+++ R         +N++ I    K G    A+EA+R
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMG--CTSYNSI-IDGFFKEGDTDSAVEAYR 614

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M + G  P++V +++ I G     R+DLALE+  ++ +     DV AY  +I G C
Sbjct: 615 ---EMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFC 671

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   +  A  LF+E++  GL+P+V+ YN LI+G+   G +D A+    +M+  +  S D+
Sbjct: 672 KKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMV-NDGISCDL 730

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TYTT+IDGL   G    A  L++E+   G  P+ I ++ L+ GL K  +   A      
Sbjct: 731 FTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEE 790

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           MK+K   P++ ++  +I+    E N   AF V  EM
Sbjct: 791 MKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEM 826



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/615 (23%), Positives = 272/615 (44%), Gaps = 100/615 (16%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L  +++ +G    +  +Y  ++ A  K  +++       EM  +G        T L+  +
Sbjct: 296 LLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGF 355

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIR--- 167
           CN  +  KAL  FN + + G   D+ +FS+++  F K  E++KA E+ +RM    I    
Sbjct: 356 CNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSS 415

Query: 168 ----------------------LNEKTFCVLIHGFV---------KKSRVDKALQLFDKM 196
                                  N+     + HGF+         K+ +VD A      M
Sbjct: 416 VLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMM 475

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI----TSCSD 252
              G   +   Y+ ++   C+ K +++A  ++SEM   G+ P+    S LI     +  +
Sbjct: 476 ENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDE 535

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           +    ++ + I  + + N   ++ N+I+  L   G   +A  +LQ +IK           
Sbjct: 536 QNAWEVINQMIASNFEANE--VIYNTIINGLCKVGQTSKAKEMLQNLIK----------- 582

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +   S   +S++ II+   K+G  D A+  +REM++ G   NV  + +LI+G C S
Sbjct: 583 ----EKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKS 638

Query: 373 NRLEESYELLREMEESGFK---PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           NR++ + E++ EM+    K   P +                 GAL               
Sbjct: 639 NRMDLALEMIHEMKSKDLKLDVPAY-----------------GAL--------------- 666

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                 I   CK      A+   +++++ G +P++  Y+  I G  ++ ++D A++L++ 
Sbjct: 667 ------IDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKK 720

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G   D+  Y  +I GL K   +  A DL++E++  G++P    Y +L+NG  K G 
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQ 780

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
             +A   L  M +K+  +P+V+ Y+T+I G    G  ++A  + +EM EKG   +   F 
Sbjct: 781 FVRASKMLEEM-KKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFN 839

Query: 610 ALITGLCKCDRPRAA 624
            L++G  + ++P AA
Sbjct: 840 LLVSG--RVEKPPAA 852



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 244/535 (45%), Gaps = 26/535 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ LL A+ +   +D A +    M D N+         ++   V+ + +D+A ++++KM 
Sbjct: 172 FNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             G A D     +++    + ++ E A++++  +   G  PD  + S  + +     +L 
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLV 291

Query: 258 L---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           +   L++E+ E   V        S++   V  G++++A  +   M+        G+ M +
Sbjct: 292 MALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMV------GFGIPMSV 345

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           I   +          +I       +L  AL  F  M + G   +  +++ +I+  C +  
Sbjct: 346 IAATS----------LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNME 395

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E++ E+ + M+  G  P+   ++ M +   + +    AL +         E W+ H  +
Sbjct: 396 MEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFN----DSFETWIAHGFM 451

Query: 435 LIK---ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             K    LCK GK   A  FL  M  +G  P++V Y+  +     +K +DLA  +F ++ 
Sbjct: 452 CNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  P+   Y+I+I G  K Q    A ++ N+MI      +   YN +ING CK G   
Sbjct: 512 EKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTS 571

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   L  +++++  S    +Y ++IDG    G  D A+  + EM E G +PN +TF +L
Sbjct: 572 KAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSL 631

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I G CK +R   AL     MK K +K D+  + ALI  F  + +   A+ +  E+
Sbjct: 632 INGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSEL 686


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 162/579 (27%), Positives = 274/579 (47%), Gaps = 29/579 (5%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEV 151
           YG+  D      LL+ +    +   A+  F  +++H    WV   + + LL A  +   V
Sbjct: 144 YGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVP--IMNNLLTAMVRRNMV 201

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
             A +L + M +  I  +  T  V++   +K+ + ++  + F +    G   DAA Y ++
Sbjct: 202 CDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSIL 261

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
           +  +C+   L +A +L  EM+  G  P     + +I +C  +G     L +K+      +
Sbjct: 262 VQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGL 321

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               ++  S+M+     G ++ A  L   +++G  + DV +                F +
Sbjct: 322 PMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI----------------FSV 365

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN   K G ++ A  L+  M  +G   NVF+ N+L++G    N LE +Y L  E  E G
Sbjct: 366 LINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG 425

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEA 448
                 T N + + L     V  A NL  KM  +G  P  V +N L++   CK G   +A
Sbjct: 426 ITNV-VTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGH-CKKGCMDKA 483

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           +  L  +++ G  P+ V Y+  I G       + A  +F  + A    P    +N +I+G
Sbjct: 484 YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVING 543

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-S 567
           L K  RV+E +D  N  I +G + +  TYN +I+G+ K G +D A+L    M E  SG S
Sbjct: 544 LGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE--SGIS 601

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDVITYT+LIDGLC + +   A+ + ++M+ KG   + + + ALI G CK     +A   
Sbjct: 602 PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF 661

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  + + G+ P+  V+ ++IS F+   N   A  + +EM
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 170/662 (25%), Positives = 302/662 (45%), Gaps = 65/662 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + + + R   +   R L  ++V+   +     L  ++R     G  EE    F + K  G
Sbjct: 191 LLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRG 250

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP-------------- 106
           L V +  +Y+ L++A+C+   ++L    LKEM+++GW   K T T               
Sbjct: 251 LEV-DAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEA 309

Query: 107 ---------------------LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
                                L++ YC  G  + AL +F+E+++ G V D  +FS+L+  
Sbjct: 310 LRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLING 369

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            SK G+++KA EL  RM    I+ N      L+ GF +++ ++ A  LFD+  + G  ++
Sbjct: 370 CSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TN 428

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVK 261
              Y++++  L +  ++  A  L+ +M   GITP     + LI     +G   +   ++K
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488

Query: 262 EIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
            I E     +  T TLL +   +     G  ++A+ + + M+                  
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFK----KGDSERAFVVFEQMMAA---------------- 528

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            ++P   +F+ +IN L K G++           + G +     YN++IDG      ++ +
Sbjct: 529 NIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSA 588

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
               REM ESG  P   T  S+   LC+   +  AL +   M+ +G +  V   + LI  
Sbjct: 589 LLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDG 648

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK      A +F T+++  G  P+ V Y++ I G I +  ++ AL L +++  +    D
Sbjct: 649 FCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCD 708

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +  Y  II GL K  +++ A DL++EM++K ++P +  Y +LING   +G ++ A   L 
Sbjct: 709 LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK 768

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M +  + +P V+ Y  LI G    G   +A  L +EM +KG  P+  T+  L+ G  K 
Sbjct: 769 EM-DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827

Query: 619 DR 620
             
Sbjct: 828 SH 829



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 168/627 (26%), Positives = 288/627 (45%), Gaps = 26/627 (4%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V +A  L+D++   G+   + Y+ + ++ A  K    + VE   KE +  G   D    
Sbjct: 200 MVCDARQLYDEMVERGI-YGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAY 258

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           + L+Q  C     + A  +  E+ + GWV  +  ++ ++VA  K G   +A  L + M  
Sbjct: 259 SILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             + +N      L+ G+     V+ ALQLFD++ + G   D  ++ V+I G  K   +E 
Sbjct: 319 VGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIM 280
           A +LY+ MK  GI P+  I++ L+    ++  L     L  E  E    N +T   N ++
Sbjct: 379 AYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTY--NILL 436

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           + L   G +++A NL + M+                KG ++P+  S++ +I    K G +
Sbjct: 437 KWLGELGKVNEACNLWEKMVS---------------KG-ITPSLVSYNNLILGHCKKGCM 480

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A S+ + + + G   N   Y  LIDG       E ++ +  +M  +   PT  T N++
Sbjct: 481 DKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTV 540

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              L +   V    + +     QG     + +N++ I    K G    A     +M + G
Sbjct: 541 INGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI-IDGFFKEGAVDSALLAYREMCESG 599

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD++ Y++ I GL    ++ LALE+  D+   G   DVVAY+ +I G CK   +  A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             F E++  GL P+   YN +I+G+    N++ A L L + + K     D+  YT++I G
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAA-LNLHQEMIKNKVPCDLQVYTSIIGG 718

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L   G+   A+ L++EM  K   P+ + +  LI GL    +   A    + M    + P 
Sbjct: 719 LLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPS 778

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           + V+  LI+    E N   AF +  EM
Sbjct: 779 VLVYNILIAGNFREGNLQEAFRLHDEM 805



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 281/601 (46%), Gaps = 23/601 (3%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N LL A+ +   V        EM + G   D YTL  +++     G+F++    F E   
Sbjct: 189 NNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKG 248

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  VD   +SIL+ A  +  +++ ACEL++ M +     ++ T+  +I   VK+    +
Sbjct: 249 RGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVE 308

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL+L D+M   G   +  +   ++ G C    + +ALQL+ E+   G+ PD  I S LI 
Sbjct: 309 ALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLIN 368

Query: 249 SCSDEGELTLLVKEIWEDRD---VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
            CS  G++     E++       +     + NS++        ++ AY L          
Sbjct: 369 GCSKVGDME-KAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLF--------- 418

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            D  VE  +        N  +++I++  L + GK++ A +L+ +M   G   ++  YNNL
Sbjct: 419 -DEAVEHGIT-------NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I G C    ++++Y +L+ + E G KP   T   +     ++ D   A  +  +M     
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANI 530

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P       +I  L K G+  E    L + +++GF+   + Y++ I G      VD AL 
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALL 590

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
            +R++C  G  PDV+ Y  +I GLCK+ ++  A ++ ++M  KG+   V  Y+ LI+G+C
Sbjct: 591 AYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFC 650

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K  +++ A    + +L+    +P+ + Y ++I G       + A+ L  EM +     + 
Sbjct: 651 KMHDMESASKFFTELLDI-GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDL 709

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             + ++I GL K  +   AL  +  M  K + PD+ ++  LI+   +      A ++LKE
Sbjct: 710 QVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKE 769

Query: 666 M 666
           M
Sbjct: 770 M 770



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 38/426 (8%)

Query: 279 IMRILVSNGSIDQAYN-LLQAMIKGE--PIADVGVEMLMIFKGTVSPNTSS--FDIIINT 333
           ++ IL SN     +   LL   + G+  P A V VE L+   G     + S  F+ ++ +
Sbjct: 100 LIHILSSNSKTCSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKS 159

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            ++  K+  A+  FR M +   +  V + NNL+  +   N + ++ +L  EM E G    
Sbjct: 160 FVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGD 219

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +TL+ + R   +           ++ + +G E      ++L++ +C+      A   L 
Sbjct: 220 CYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLK 279

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M + G++P    Y+A I   +       AL L  ++ + G   +V+    ++ G C   
Sbjct: 280 EMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLG 339

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------- 560
            V  A  LF+E++  G++P V  +++LING  K G++++A    +RM             
Sbjct: 340 DVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVN 399

Query: 561 -----------LEK---------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                      LE          E G  +V+TY  L+  L   G+ ++A  LW +M  KG
Sbjct: 400 SLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             P+ +++  LI G CK      A    + + E+G+KP+   +  LI  F  + +   AF
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519

Query: 661 EVLKEM 666
            V ++M
Sbjct: 520 VVFEQM 525


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 176/669 (26%), Positives = 290/669 (43%), Gaps = 66/669 (9%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           +R  +SP    F +R L    + E    ++ Q+ ++GL +P+  +YN ++++ CK   + 
Sbjct: 142 ARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGL-LPDTVTYNTMIKSYCKEGDLT 200

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILL 142
                 + + + G   + +T   L+  YC +G+  KA  +F  +   G   +E+ ++IL+
Sbjct: 201 TAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 260

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               +   V +A  L   M       N + F  LI G  K  RV  A  LFD M ++G  
Sbjct: 261 QGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVV 320

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE------L 256
                Y+ +I G  K  ++  AL++   M+ +G  PD    + LI    D+        L
Sbjct: 321 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL 380

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIM------------RILVSNGSID-QAY-NLLQAMIKG 302
              VKE +    V    L+    M            +++ S   +D Q +  L+ ++IK 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           + + +    +  I    + PN  ++  II+   K GK+D+AL + + M + GC  N + Y
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+L+ GL    +L ++  LL +M++ G  P   T  ++ +  C   D   A  L   M  
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G +P      +L   LCK G+A EA+ F+   V++G     V Y+  I G       D 
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE------------------------- 517
           A  L   +   GC PD   Y++++  LCK +R+ E                         
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 518 ----------AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
                     A+ ++NEM + G  PS  TY + IN +CK G ++ A   + +M E+E  +
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM-EREGVA 736

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+TY  LIDG    G  D A      M    C PN  T+  L+  L K       L +
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-----GNLAY 791

Query: 628 FRMMKEKGM 636
            R +   GM
Sbjct: 792 VRSVDTSGM 800



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/633 (25%), Positives = 280/633 (44%), Gaps = 41/633 (6%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L ++ R+   R+L   + ++    S      +I     +G + +A  + + +++ G C
Sbjct: 296 SGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG-C 354

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P++++YN L+  LC   + +  E+ L      G+     T T L+  YC + +FD AL 
Sbjct: 355 HPDDWTYNTLIYGLCDQKTEEAEEL-LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 413

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + N+++     +D  VF  L+ +  K   + +A EL+  +    +  N  T+  +I G+ 
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +VD AL++   M + G   +A  Y+ ++ GL K+K+L  A+ L ++M+  GI P+  
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533

Query: 242 ILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + L+    DE +      + E+ E   +         +   L   G  ++AY+     
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---- 589

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                I   GV +  ++          +  +I+   K G  D A +L   M   GC  + 
Sbjct: 590 -----IVRKGVALTKVY----------YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + Y+ L+  LC   RL E+  +L +M   G K T F    +   + R      A  +  +
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   GH+P     T+ I   CK G+  +A   +  M +EG  PD+V Y+  I G   +  
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ----RVAEAEDLFN------------ 523
           +D A    + +    C P+   Y +++  L K      R  +   ++N            
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLE 814

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+  GL P+V TY+ LI G+CK+G +++A L L  M  K   SP+   YT LI   C  
Sbjct: 815 RMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK-GLSPNEDIYTLLIKCCCDT 873

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
              + A+   + M E G  P   ++  L+ GLC
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLC 906



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 223/498 (44%), Gaps = 53/498 (10%)

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A + I R     + L+ K +   +    +    +   +++ ++ + G   D   Y+ +I 
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             CK   L  A + +  +   G+ P+    + L+      GEL    K  W         
Sbjct: 192 SYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELR---KACWL-------- 240

Query: 274 LLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                +M  L+     + +Y  L+Q + + + + +  V  LM+ +   SPN  +F  +I+
Sbjct: 241 ----FLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G++  A  LF  M Q G + +V  YN +I G     R+ ++ ++   ME++G  P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N++   LC +                                    K  EA   L
Sbjct: 357 DDWTYNTLIYGLCDQ------------------------------------KTEEAEELL 380

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            + V+EGF P +V ++  I G    ++ D AL +   + +  C  D+  +  +I+ L K 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA++L NE+   GL+P+V TY  +I+G+CKSG +D A+  L +M+E++   P+  T
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWT 499

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y +L+ GL    +   A+ L  +M++ G  PN IT+  L+ G C       A   F MM+
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 633 EKGMKPDMFVFVALISAF 650
           + G+KPD   +  L  A 
Sbjct: 560 QNGLKPDEHAYAVLTDAL 577



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 247/577 (42%), Gaps = 84/577 (14%)

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V+++++  G + + V ++ ++ ++ K G++  A      + +  +     T   L+ G+ 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   + KA  LF  M   G   +   Y ++I GLC+ K +  AL L+  MK  G +P+  
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVR 289

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI+                          LC S        G +  A  L  AM +
Sbjct: 290 AFTFLISG-------------------------LCKS--------GRVGDARLLFDAMPQ 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             V P+  +++ +I    K G+++ AL +   M + GC  + + 
Sbjct: 317 N----------------GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI GLC+  + EE+ ELL    + GF PT  T  ++    C  +    AL +  KM 
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               +  ++    LI  L K  +  EA   L ++   G +P+++ Y++ I G     +VD
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 479

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +ALE+ + +   GC P+   YN ++ GL K +++ +A  L  +M   G+IP+V TY  L+
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPD-----VIT------------------------ 572
            G C   + D A   L  M+E+    PD     V+T                        
Sbjct: 540 QGQCDEHDFDNAFR-LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT 598

Query: 573 ---YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
              YTTLIDG   AG  D A  L   M ++GC P+  T+  L+  LCK  R   AL    
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M  +G+K  +F +  LI   L E     A  +  EM
Sbjct: 659 QMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 238/599 (39%), Gaps = 105/599 (17%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +   ++ S+C +     G LI  L     ++EA  L +++   GL VPN  +Y  +++  
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGL-VPNVITYTSIIDGY 472

Query: 77  CKSCSVDLVEMRLKEMQDYG-----WGYDKY----------------------------- 102
           CKS  VD+    LK M+  G     W Y+                               
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 103 -TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
            T T LLQ  C+   FD A  +F  +  +G   DEH +++L  A  K G  ++A   I R
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR 592

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
                + L +  +  LI GF K    D A  L ++M   G   D+  Y V++  LCK K+
Sbjct: 593 K---GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           L  AL +  +M   GI             C+                 +   T+L + ++
Sbjct: 650 LNEALPILDQMSLRGI------------KCT-----------------IFAYTILIDEML 680

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R     G  D A  +   M                      P+ +++ + IN+  K+G+L
Sbjct: 681 R----EGKHDHAKRMYNEMTSSGH----------------KPSATTYTVFINSYCKEGRL 720

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A  L  +M + G   +V  YN LIDG  +   ++ ++  L+ M  +  +P ++T   +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 401 FRCL-------CRRQDVVGALNLVR---------KMRVQGHEPWVKHNTLLIKELCKHGK 444
            + L        R  D  G  NL+          +M   G  P V   + LI   CK G+
Sbjct: 781 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 840

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L  M  +G  P+   Y+  I    D K  + AL     +   G  P + +Y +
Sbjct: 841 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 900

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           ++ GLC      + + LF +++  G       + +L +G  K+G +D     LS M ++
Sbjct: 901 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 147/305 (48%), Gaps = 2/305 (0%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN  +  L   +  E    +  ++ + G  P   T N+M +  C+  D+  A    R + 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G EP       L+   C+ G+  +A      M   G   +   Y+  I GL + K V 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL LF  +   GC P+V A+  +ISGLCK+ RV +A  LF+ M   G++PSV TYN +I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            G+ K G ++ A L +  ++EK    PD  TY TLI GLC   + ++A  L N   ++G 
Sbjct: 331 VGYSKLGRMNDA-LKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGF 388

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  +TF  LI G C  ++   AL     M     K D+ VF  LI++ + +     A E
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 662 VLKEM 666
           +L E+
Sbjct: 449 LLNEI 453



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 3/202 (1%)

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           CY+ A+  L      +    ++  +   G  PD V YN +I   CK   +  A   F  +
Sbjct: 150 CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL 209

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  GL P   T N L+ G+C++G + +A   L  M+       +  +YT LI GLC A  
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACW-LFLMMPLMGCQRNEYSYTILIQGLCEAKC 268

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +A++L+  M+  GC+PN   F  LI+GLCK  R   A + F  M + G+ P +  + A
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 646 LISAF--LSELNPPLAFEVLKE 665
           +I  +  L  +N  L  + L E
Sbjct: 329 MIVGYSKLGRMNDALKIKELME 350


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 244/512 (47%), Gaps = 32/512 (6%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  L++G  ++ RV +AL L D+M + G   DA  Y  I+ G+CK      AL + 
Sbjct: 9   NVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML 68

Query: 229 SEMKGSGITPDFEILSKLITS-CSDEGELTL--LVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +M  S I  +  I S ++   C D   +    +  E+ E + +    L  N ++    S
Sbjct: 69  RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHE-KGIFPNVLTYNCMIDGYCS 127

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G    A  LL+ MI+                  + P+  +F  +IN  +K+GK+  A  
Sbjct: 128 YGKWSDAEQLLRDMIER----------------NIDPDVVTFSALINAFVKEGKVSGAEE 171

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+REM +         Y+++IDG C  +RLE++  +   M   G  P   TLN++    C
Sbjct: 172 LYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCC 231

Query: 406 RRQ-----------DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           R +           +V  A +L ++M   G  P +     L+  LC++GK  +A      
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
             +     D    +  I G+    +VD A +LF  +  +G   DVV YNI+I    K   
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN 351

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
              AED++ EM+ KG+IPS  TYN +++G+CK   +++A   +  M+  E  SPDV+T++
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV-SEGCSPDVVTFS 410

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TLI G C AGR DD + L++EM ++G   + IT+ ALI G CK      A   F  M   
Sbjct: 411 TLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS 470

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+ PD   F ++++   ++        +L+++
Sbjct: 471 GVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 245/512 (47%), Gaps = 13/512 (2%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M + G   +  T T L+   C  G+  +AL++ + +++ G   + V +  ++    K G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A  ++ +MD+  I+ N   +  ++    K     KA  +F +M + G   +   Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---R 267
           +I G C   +   A QL  +M    I PD    S LI +   EG+++   +E++ +   R
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSG-AEELYREMLRR 179

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           ++   T+  +S++     +  ++ A ++   M+      D+ + +  +  G         
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDI-ITLNTLIDGCCRAKRH-- 236

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+   + G +++A  LF+EM   G   ++   N L+ GLC + +LE++ E+ +  ++
Sbjct: 237 --LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           S       T N +   +C+   V  A +L   + V G E  V    +LI    K G  + 
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A     +M+ +G +P  V Y++ + G     R++ A ++   + + GC PDVV ++ +I 
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG- 566
           G CKA RV +  +LF+EM  +GL+    TYN LI+G+CK G+++ A      M+   SG 
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV--SSGV 472

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            PD IT+ +++ GLC        + +  ++++
Sbjct: 473 CPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 209/457 (45%), Gaps = 67/457 (14%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y+ +++ LCK  +    +    EM + G   +  T   ++  YC+ G++  A  +  ++I
Sbjct: 83  YSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMI 142

Query: 129 DHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +   +D  V  FS L+ AF K G+V  A EL   M   NI     T+  +I GF K SR+
Sbjct: 143 ERN-IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-----------LEMALQLYSEMKGSG 235
           + A  +FD M   G + D    + +I G C+ K+           + +A  L+ EM  +G
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261

Query: 236 ITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           ++PD    + L+    + G+L   L + ++++   ++  T  CN I+  +     +D+A+
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +L  ++    P+  V  +++            +++I+I   +K+G    A  ++ EM   
Sbjct: 322 DLFNSL----PVNGVETDVV------------TYNILIGVFVKEGNFLRAEDIYLEMLCK 365

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + +   YN+++DG C  NRLEE+ +++  M   G  P   T +++             
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL------------- 412

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
                                 IK  CK G+  +     ++M Q G + D + Y+A I G
Sbjct: 413 ----------------------IKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +  ++ A ++F ++ + G CPD + +  +++GLC
Sbjct: 451 FCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC 487



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 161/379 (42%), Gaps = 37/379 (9%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + F  LI      G V  A  L+ ++ R  +  P   +Y+ +++  CK   ++  
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI-FPTTITYSSMIDGFCKHSRLEDA 204

Query: 86  EMRLKEMQDYGWGYDKYTLTPLL-----------QVYCNSGQFDKALSVFNEIIDHGWVD 134
           +     M   G   D  TL  L+             +C  G  + A  +F E+I +G   
Sbjct: 205 KHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSP 264

Query: 135 EHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + V  + LL    + G+++KA E+ +      + L+  T  ++I+G  K ++VD+A  LF
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLF 324

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + +  +G  +D   Y+++IG   K      A  +Y EM   GI P     + ++     +
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384

Query: 254 GEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
             L     ++   + E    + +T   +++++     G +D    L   M +   +AD  
Sbjct: 385 NRLEEARQMVDSMVSEGCSPDVVTF--STLIKGYCKAGRVDDGLELFSEMCQRGLVAD-- 440

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                         T +++ +I+   K G L+ A  +F EM   G   +   + +++ GL
Sbjct: 441 --------------TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 370 CNSNRLEESYELLREMEES 388
           C    L++   +L ++++S
Sbjct: 487 CTKAELQKGLTMLEDLQKS 505



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 2/213 (0%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           KS+  +       +I  +     V+EA  LF+ +   G+   +  +YN L+    K  + 
Sbjct: 294 KSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGV-ETDVVTYNILIGVFVKEGNF 352

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
              E    EM   G      T   ++  +C   + ++A  + + ++  G   + V FS L
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  + K G VD   EL   M    +  +  T+  LIHGF K   ++ A  +F++M  SG 
Sbjct: 413 IKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
             D   +  ++ GLC   +L+  L +  +++ S
Sbjct: 473 CPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M E GC  N +TF  L+ GLC+  R   AL     M E+G +PD   +  +++      +
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 656 PPLAFEVLKEM 666
              A  +L++M
Sbjct: 61  TVSALNMLRKM 71


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 272/568 (47%), Gaps = 42/568 (7%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           T T ++  +C + Q  +AL+ F ++ +    +E  +++++    K     KA E+++ M 
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMR 68

Query: 163 DC-NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIGGLCKNKQ 220
           D  ++  +  T+  +I+GF K+  +D+A ++  +M T+ G A D   Y  ++ GLC++ +
Sbjct: 69  DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGK 128

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKEI-----WEDRDVNTM 272
           ++ A ++  EMK  G+ PD    S LIT   +     E   L KEI     W+  DV T 
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP-DVVTY 187

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T L +   +    +G++++A  +L  M   + +                PN  ++  +++
Sbjct: 188 TALIDGFCK----SGNLEKAMKMLGVMEGRKCV----------------PNVVTYSSLLH 227

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G LD AL LFR MT  GC+ NV  Y  LI GLC +++++ +  L+ EM  +   P
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              + N++    CR   +  A  L ++M  +   P     T L++  C   +  EA   L
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLL 347

Query: 453 TDM-VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
            +M    G  PD+V YS  + G    KR   A E  +++ A    P+ V Y+ +I GLCK
Sbjct: 348 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 407

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A RV  A ++   M+ K + PSV T+N +I   C+ G++D+A   L  M       P ++
Sbjct: 408 AGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM-AAHGLEPGMV 466

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEME--------EKGCAPNRITFMALITGLCKCDRPRA 623
           TYTTL++G    GR + A  L+  M              P +  F ALI GLCK      
Sbjct: 467 TYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDK 525

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFL 651
           A+     ++ +  +P     +A++   L
Sbjct: 526 AMAVVEELRSRECEPAEEDCLAIVDGLL 553



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 246/502 (49%), Gaps = 26/502 (5%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ ++I GF K +++ +AL  F+KM +   A +   Y+V++ GLCK +    A ++  EM
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 232 K-GSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           + G  + PD    S +I     +GE+     +++E+     +    +   S++  L  +G
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127

Query: 288 SIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
            +D+A  +++ M +KG                 V P+  +F  +I       K+D AL L
Sbjct: 128 KMDRACEMVREMKLKG-----------------VEPDKFTFSALITGWCNARKVDEALKL 170

Query: 347 FRE-MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           ++E +T      +V  Y  LIDG C S  LE++ ++L  ME     P   T +S+   LC
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 230

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +  D+  AL+L R+M  +G  P V   T LI  LC   K   A   + +M      PD V
Sbjct: 231 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A + G   + R++ A +LF+++    C PD + Y  ++ G C A R+ EA  L   M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 526 ITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
            T  G+ P V TY++++ G+ ++    +A   +  M+ +   +P+ +TY++LIDGLC AG
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV-APNAVTYSSLIDGLCKAG 409

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R D A+ +   M  K   P+  TF ++I  LC+      A      M   G++P M  + 
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L+  F       +A+E+ + M
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVM 491



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 254/572 (44%), Gaps = 60/572 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           PN  +YN ++  LCK+         LKEM+D      D  T + ++  +C  G+ D+A  
Sbjct: 39  PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 98

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +  E++    +   V  ++ ++    + G++D+ACE++  M    +  ++ TF  LI G+
Sbjct: 99  ILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 158

Query: 181 VKKSRVDKALQLFDK-MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               +VD+AL+L+ + +T S +  D   Y  +I G CK+  LE A+++   M+G    P+
Sbjct: 159 CNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 218

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               S L+                           LC +        G +DQA +L + M
Sbjct: 219 VVTYSSLLHG-------------------------LCKA--------GDLDQALDLFRRM 245

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            KG V PN  ++  +I+ L    K+D A  L  EMT   C  + 
Sbjct: 246 TS---------------KGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDT 289

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L+DG C   R+EE+ +L +EM      P   T   + R  C    +  A  L+  
Sbjct: 290 VSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 349

Query: 420 MRV-QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M+   G +P V   ++++    +  + +EA  F+ +M+     P+ V YS+ I GL    
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           RVD A+E+ +++      P V  +N +I  LC+   + EA  L   M   GL P + TY 
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI------TYTTLIDGLCIAGRPDDAIML 592
            L+ G+ ++G ++ A      M +K   S           ++ LI GLC A   D A+ +
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 529

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             E+  + C P     +A++ GL +  R   A
Sbjct: 530 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 167/315 (53%), Gaps = 5/315 (1%)

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C   V  +  +IDG C +N+L+++     +M E    P   T N +   LC+ +    A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61

Query: 415 NLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV-QEGFLPDIVCYSAAIG 472
            ++++MR  +   P +   + +I   CK G+   A   L +MV ++G  PD+V Y++ + 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT-KGLI 531
           GL    ++D A E+ R++   G  PD   ++ +I+G C A++V EA  L+ E++T     
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V TY  LI+G+CKSGN+++AM  L  ++E     P+V+TY++L+ GLC AG  D A+ 
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLG-VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+  M  KGC PN +T+  LI GLC   +  AA +    M      PD   + AL+  + 
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 652 SELNPPLAFEVLKEM 666
                  A ++ KEM
Sbjct: 301 RLGRIEEAKQLFKEM 315



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 226/494 (45%), Gaps = 33/494 (6%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           +L + V R+G+  P+  +Y  +++ LC+   +D     ++EM+  G   DK+T + L+  
Sbjct: 99  ILREMVTRDGI-APDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157

Query: 111 YCNSGQFDKALSVFNEII-DHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           +CN+ + D+AL ++ EI+    W  + V ++ L+  F K G ++KA +++  M+      
Sbjct: 158 WCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 217

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  T+  L+HG  K   +D+AL LF +MT  G   +   Y  +I GLC   +++ A  L 
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDV-NTMTLLCNSIMRILV 284
            EM  +   PD    + L+      G   E   L KE+     + + +T  C  ++R   
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC--LVRGFC 335

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +   +++A  LL+ M     I                P+  ++ I++    +  +   A 
Sbjct: 336 NASRLEEARFLLENMKTAAGI---------------DPDVVTYSIVVAGYSRAKRFVEAA 380

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
              +EM       N   Y++LIDGLC + R++ + E+L+ M     +P+  T NS+   L
Sbjct: 381 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGAL 440

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM--------V 456
           CR  D+  A  L+  M   G EP +   T L++   + G+   A+     M         
Sbjct: 441 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSS 500

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
               +P+   +SA I GL   + +D A+ +  ++ +  C P       I+ GL +A R  
Sbjct: 501 AANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 559

Query: 517 EAEDLFNEMITKGL 530
           EA  L N +   GL
Sbjct: 560 EAGKLINSISKVGL 573



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 183/427 (42%), Gaps = 29/427 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA  L+ ++       P+  +Y  L++  CKS +++     L  M+      +  T +
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            LL   C +G  D+AL +F  +   G V   V ++ L+       +VD A  L++ M   
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  ++  L+ G+ +  R+++A QLF +M       D   Y  ++ G C   +LE A
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 225 LQLYSEMK-GSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMR 281
             L   MK  +GI PD    S ++   S         + I E   R+V    +  +S++ 
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L   G +D A  +L+ M+                   V P+  +F+ +I  L + G +D
Sbjct: 404 GLCKAGRVDHAMEVLKNMVNKR----------------VEPSVGTFNSVIGALCRLGDMD 447

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME--------ESGFKPT 393
            A  L   M   G    +  Y  L++G   + R+E +YEL   M          +   P 
Sbjct: 448 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE 507

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               +++ R LC+ +++  A+ +V ++R +  EP  +    ++  L + G+  EA + + 
Sbjct: 508 Q-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 566

Query: 454 DMVQEGF 460
            + + G 
Sbjct: 567 SISKVGL 573



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R  RI   + L +++    C         L+R   +   +EEA  L + +K      P+ 
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y+ ++    ++         ++EM       +  T + L+   C +G+ D A+ V   
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 127 IIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           +++   V+  V  F+ ++ A  + G++D+A +L+  M    +     T+  L+ GF +  
Sbjct: 421 MVNK-RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 185 RVDKALQLFDKMTKSGFASDAAM-------YDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           R++ A +LF+ M K    S +A        +  +I GLCK ++++ A+ +  E++     
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 539

Query: 238 PDFE 241
           P  E
Sbjct: 540 PAEE 543


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 166/631 (26%), Positives = 289/631 (45%), Gaps = 91/631 (14%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           +G ++R LG +  +     LFD + R+     + ++YNC L+AL K+ +  L   + ++M
Sbjct: 8   VGEVLRHLGKISTIVR---LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVD 152
           Q  G+  D +T                                  +SI+L    K GE+D
Sbjct: 65  QRRGYPPDDFT----------------------------------YSIVLRGLCKAGELD 90

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF-ASDAAMYDVI 211
           KA EL+ ++ +  ++LN  T+ V+I G  K SRVD AL++F  M+  G    D   ++ +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED----- 266
           + GLC  +++  A  L+  M  +G  P+    S L+      G L    + +WE+     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACR-LWEEMVEKS 209

Query: 267 ------RDVNTMTLLC---------------------------NSIMRILVSNGSIDQAY 293
                    + +T LC                           ++++ IL   G  ++A 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLF-- 347
           N +   +    + D   E    F+  +S    P+   F+ +I+ + K  +L   + LF  
Sbjct: 270 NQMIEHLCRSGMLD---EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326

Query: 348 -REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            + M +  C  N+  YN ++D LC + +L+E+ EL+ EM   G  P   T +++   LC+
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A +L+ +M  +G  P    +  ++  L K GK   A   L  M   G  PD+V 
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  + GL    R+D A+     + A  C PDV +Y III+ LC++ + A A  +F EM+
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            +G++P    Y+ L++G  ++G  D A+  L   L K    PD + +  ++DGLC AG+ 
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK----PDFVMHKMVVDGLCKAGKA 562

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           +DA  +   M + G   +  T++ ++ GL K
Sbjct: 563 EDACEVVERMADAGFPADAFTYINVVRGLRK 593



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 243/513 (47%), Gaps = 34/513 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+   +    K +    A + F +M + G+  D   Y +++ GLCK  +L+ A +L  ++
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + SG+  +    S +I  C     +   + EI++     TM+     +  ++  N     
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDAL-EIFK-----TMSAGGGCVPDVVTFN----- 148

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             +LL+ +  GE +++  V    + K    PN  S+  +++ L K G+LD A  L+ EM 
Sbjct: 149 --SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL-------------- 397
           +  C+ ++  Y + + GLC +NR+ E+ +  R+M   G K                    
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266

Query: 398 ---NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA---FRF 451
              N M   LCR   +  A     +M  + H P  +    LI  +CK  +  +    F+ 
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +  M +    P++  Y+  +  L   K++D A EL  ++  +G  PDVV Y+ ++ GLCK
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             ++  A DL  EM  +G+ P   T   ++N   K+G +D A+  L  M  + S +PD++
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS-TPDLV 445

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY TL+DGLC AGR D+AI    +M    C P+  ++  +IT LC+  +   A   F+ M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            ++G+ PD  ++ +L+          LA E+LK
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 2/228 (0%)

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G++  V      +  L K      A+     M + G+ PD   YS  + GL     +
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSVATYNL 539
           D A EL   +   G   +V+ Y+++I G CKA RV +A ++F  M   G  +P V T+N 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L+ G C    + +A + L   + K    P+VI+Y+TL+DGLC AGR D+A  LW EM EK
Sbjct: 150 LLKGLCSGERMSEAFV-LFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            C P+ + + + +TGLCK +R   A    R M  KG K D   F  +I
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI 256



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 221/491 (45%), Gaps = 44/491 (8%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L    R++   VL + + K+ C  +  +   L+  L   G ++EA  L++++  E  CVP
Sbjct: 154 LCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV-EKSCVP 212

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +Y   +  LCK+  V       ++M   G   D    + ++ + C  G  ++A    
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--- 269

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           N++I+H                + G +D+AC+  E M   N   + + F  LIH   K  
Sbjct: 270 NQMIEH--------------LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 185 RVDKALQLFDKMT--KSGF-ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           R+   + LF +M   K  +   +   Y++++  LCK KQL+ A +L +EM   G++PD  
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 242 ILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             S L+      G+L     L++E+ ++  V   +    SI+  L   G +D A + L+ 
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLET 434

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M                 +G+ +P+  +++ +++ L K G++D A++   +M    C  +
Sbjct: 435 MKA---------------RGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           VF Y  +I  LC S +   ++ + +EM + G  P     +S+   L R      AL L++
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
               +   P    + +++  LCK GKA +A   +  M   GF  D   Y   + GL  + 
Sbjct: 539 TSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLG 595

Query: 479 RVDLALELFRD 489
           +VD A +L  D
Sbjct: 596 KVDKARQLVDD 606



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 34/197 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++  L   G V+ A    + +K  G   P+  +YN LL+ LCK+  +D     L +M   
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARG-STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF----------------- 138
               D ++ T ++   C SGQ   A ++F E++  G + + V                  
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533

Query: 139 ----------------SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                            +++    K G+ + ACE++ERM D     +  T+  ++ G  K
Sbjct: 534 LELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRK 593

Query: 183 KSRVDKALQLFDKMTKS 199
             +VDKA QL D  +++
Sbjct: 594 LGKVDKARQLVDDASET 610



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 41/97 (42%)

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V TY   +D L  A     A   + +M+ +G  P+  T+  ++ GLCK      A     
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++E G+K ++  +  +I           A E+ K M
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 291/591 (49%), Gaps = 25/591 (4%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            L+  LG  G ++ A  +F +++      P+ Y+Y  +++ALC++  +D   + L E++ 
Sbjct: 185 ILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELER 244

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK---WGE 150
            G      T   L+   C SG+ ++A  +   +++       V F IL+   ++   +GE
Sbjct: 245 SGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGE 304

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VD    +++ M+   I  NE  +  LI    ++    +AL+LFD+M   G       Y++
Sbjct: 305 VDA---VLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNL 361

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT-SCSDEGELTLLVKEIWEDRDV 269
           I   LCK  ++E A Q+  EM  +G+T    + + ++       G L ++++ I E    
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIRE---- 417

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFD 328
                    + R L  N ++  A   +Q + K G+      +  L++ KG +  N ++ +
Sbjct: 418 --------MVARFLKPNDAVMTA--CIQELCKRGKHEEAAEIWFLVLGKG-LGVNIATSN 466

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+ L +   +  A  + + M   G   +   YN +I   C ++++EE+ +L  +M + 
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GFKP  FT N+  R  C    V   L+L+ +M+ +G +P +     +I   CK     +A
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            ++L ++++ G  P+ V Y+A IGG      +  A+ +   +  +G  P  + YN ++  
Sbjct: 587 NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYW 646

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           +C A  V EA+++F + I K +   V  Y ++I G+CK G ID+A++    M  ++   P
Sbjct: 647 MCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDI-RP 705

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           + +TYTTL+   C  G  ++A  L++EM   G  P+ +++  LI+G C+ D
Sbjct: 706 NKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/568 (22%), Positives = 244/568 (42%), Gaps = 58/568 (10%)

Query: 139 SILLVAFSKWGEVDKACELIERMDDCN-IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +IL+ A    G++D A ++   M D N +  +  T+ V+I    +   +D A  +  ++ 
Sbjct: 184 NILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELE 243

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEG 254
           +SG       Y+V++  LC++ ++E A QL   M    + P    F IL   +      G
Sbjct: 244 RSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFG 303

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E+  +++E+ E   +    ++ N ++      G   +A  L   M+              
Sbjct: 304 EVDAVLQEM-EGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS------------- 349

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID-GLCNSN 373
             KG +     ++++I   L K+G+++ A  +  EM   G   +  L+N+++   L  + 
Sbjct: 350 --KG-IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTG 406

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+    L+REM     KP    + +  + LC+R     A  +   +  +G    +  + 
Sbjct: 407 RLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSN 466

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI  LC+     EA + L  MV  G   D + Y+  I       +++ A++L  D+   
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD+  +N  +   C   +V +   L ++M ++GL P + TY  +I+G+CK+ ++ +A
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL-- 611
              L  ++ K    P+ + Y  LI G    G   DAI + + M+  G  P  IT+ +L  
Sbjct: 587 NKYLIELI-KNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMY 645

Query: 612 ---------------------------------ITGLCKCDRPRAALVHFRMMKEKGMKP 638
                                            I G CK  +   A+++F+ M  + ++P
Sbjct: 646 WMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRP 705

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  L+ A+    N   AF++  EM
Sbjct: 706 NKMTYTTLMYAYCKCGNKEEAFKLFDEM 733



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 213/467 (45%), Gaps = 23/467 (4%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILSKLI 247
           A   F +++  G +      ++++  L    QL++A +++ EM+ G+ + PD    + +I
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 248 TSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
            +    GE+    +++ E+ E   +    +  N +M  L  +G +++A+ L   M++G  
Sbjct: 224 KALCRAGEIDAAFVMLAEL-ERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR- 281

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                          + P+  +F I+IN L +  +     ++ +EM   G   N  +YN 
Sbjct: 282 ---------------LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQ 326

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI   C      E+  L  EM   G K T  T N + + LC+  ++  A  ++ +M + G
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAG 386

Query: 425 HEPWVK-HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
                   N+++   L   G+     R + +MV     P+    +A I  L    + + A
Sbjct: 387 MTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEA 446

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            E++  +   G   ++   N +I GLC+   + EA  +   M+  G+     TYN++I  
Sbjct: 447 AEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQF 506

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK+  +++A+     M+ K    PD+ T+ T +   C  G+ +D + L ++M+ +G  P
Sbjct: 507 CCKASKMEEAIQLRDDMI-KRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKP 565

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + +T+  +I G CK      A  +   + + G++P+  ++ ALI  +
Sbjct: 566 DIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 4/347 (1%)

Query: 324 TSSFDIIINTLLKD---GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           T++ D+++   L     G L  A   F E++  G   ++   N L++ L    +L+ + +
Sbjct: 142 TATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARK 201

Query: 381 LLREMEE-SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +  EM + +   P  +T   M + LCR  ++  A  ++ ++   G +P V    +L+  L
Sbjct: 202 VFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDAL 261

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G+  EAF+    MV+    P IV +   I GL   +R      + +++   G  P+ 
Sbjct: 262 CRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNE 321

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN +I   C+    +EA  LF+EM++KG+  +V TYNL+    CK G ++ A   L  
Sbjct: 322 VIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ML         +  + +   L   GR D  + L  EM  +   PN     A I  LCK  
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   A   + ++  KG+  ++    ALI       N   A +VLK M
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAM 488



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 191/444 (43%), Gaps = 17/444 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   EA  LFD++  +G+      +YN + +ALCK   ++  E  L EM   G       
Sbjct: 335 GHCSEALRLFDEMVSKGI-KQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSL 393

Query: 104 LTPLLQVYC-NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
              ++  +   +G+ D  L +  E++      ++ V +  +    K G+ ++A E+   +
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLV 453

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               + +N  T   LIHG  + + + +A ++   M  SG   D   Y+++I   CK  ++
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           E A+QL  +M   G  PD    +  + +  + G+    V++I    D     +    +  
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGK----VEDILHLLD----QMKSEGLKP 565

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            +V+ G+I   Y       K + +      ++ + K  + PN   ++ +I    ++G + 
Sbjct: 566 DIVTYGTIIDGY------CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSIS 619

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +   M   G       YN+L+  +C++  +EE+ E+  +      +        + 
Sbjct: 620 DAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIII 679

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           +  C+   +  A+   ++M  +   P     T L+   CK G   EAF+   +MV  G +
Sbjct: 680 QGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIV 739

Query: 462 PDIVCYSAAIGGLIDIKRVDLALE 485
           PD V Y+  I G  ++  +D  +E
Sbjct: 740 PDTVSYNTLISGCCEVDSLDKIVE 763



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 22/346 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  EEA  ++  V  +GL V N  + N L+  LC+  ++      LK M D G  +D+ T
Sbjct: 441 GKHEEAAEIWFLVLGKGLGV-NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRIT 499

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++Q  C + + ++A+ + +++I  G+  D   F+  L A+   G+V+    L+++M 
Sbjct: 500 YNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMK 559

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ +  T+  +I G+ K   V KA +   ++ K+G   +A +Y+ +IGG  +N  + 
Sbjct: 560 SEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSIS 619

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSI 279
            A+ +   MK +GI P     + L+      G L    KEI+     +++    +    I
Sbjct: 620 DAIGVLDTMKHNGIQPTPITYNSLMYWMCHAG-LVEEAKEIFAQCILKNIELGVIGYTII 678

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++     G ID+A    + M   +                + PN  ++  ++    K G 
Sbjct: 679 IQGFCKIGKIDEAVMYFKEMHYRD----------------IRPNKMTYTTLMYAYCKCGN 722

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            + A  LF EM   G + +   YN LI G C  + L++  E   EM
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 2/231 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            +R   ++G VE+   L DQ+K EGL  P+  +Y  +++  CK+  V      L E+   
Sbjct: 538 FLRAYCNLGKVEDILHLLDQMKSEGL-KPDIVTYGTIIDGYCKAKDVHKANKYLIELIKN 596

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +      L+  Y  +G    A+ V + +  +G     + ++ L+      G V++A
Sbjct: 597 GLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEA 656

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+  +    NI L    + ++I GF K  ++D+A+  F +M       +   Y  ++  
Sbjct: 657 KEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYA 716

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            CK    E A +L+ EM  SGI PD    + LI+ C +   L  +V+   E
Sbjct: 717 YCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAE 767


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 252/538 (46%), Gaps = 20/538 (3%)

Query: 113 NSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D ALS+FN ++        V FS LL + ++         L ++MD   I  N  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  +LI+ F   +R+  A  +   + K G+    A +  +I GLC   ++  ALQL+ +M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSNGSI 289
            G G  PD      LI      G  +  ++ +   E R+     ++ ++I+  L  +  +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A +L   M+                KG +SPN  ++  +I+ L   G    A+ LF  
Sbjct: 211 TEALSLFSDMLA---------------KG-ISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M     M +   +N L+D LC    + +++ ++  M +S  KP   T NS+    C R +
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +   +N+   M  +G  P V   T LI   CK     +A     +M Q+G +PD V Y+ 
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL  + R+  A+ LF ++  +G  PD+V Y I+   LCK  R+AEA  L   +    
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P +  Y+++++G C++G ++ A    S+ L  +   PDV TYT +I+GLC  G   +A
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSK-LSSKGLHPDVRTYTIMINGLCQQGLLAEA 493

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             L+ EM+E GC+PN  T+  +  G  + +    A+  F+ M  +G   D+     L+
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 253/546 (46%), Gaps = 21/546 (3%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           +V  +++A  LF+++ R     P+   ++ LL ++ +      V    K+M  +G  ++ 
Sbjct: 31  NVNTIDDALSLFNRMLRMR-PPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
           YTL  L+  +C+  +   A SV  +I+  G+      F+ L+      G++ +A +L ++
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M     + +  T+  LI+G  K      A++    M +        +Y  II  LCK++Q
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNS 278
           L  AL L+S+M   GI+P+    S LI      G     ++  +    R +    L  N+
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L   G + +A+ ++  MI+ +                + P+  +++ +++      
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSD----------------LKPDVVTYNSLMDGHCLRS 313

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           ++   +++F  M + GC+ +V  Y  LI+G C    ++++  L  EM + G  P   T N
Sbjct: 314 EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYN 373

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LC    +  A+ L  +M V G  P +    +L   LCK+ +  EA   L  +   
Sbjct: 374 TLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              PDI  YS  + G+     ++ A +LF  + + G  PDV  Y I+I+GLC+   +AEA
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LF EM   G  P+  TYNL+  G+ ++    +A+     ML +   S DV T T L++
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR-GFSIDVSTTTLLVE 552

Query: 579 GLCIAG 584
            L   G
Sbjct: 553 MLSDDG 558



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 192/428 (44%), Gaps = 22/428 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A      +++   C P    Y+ ++++LCK   +        +M 
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRN-CRPTVVVYSTIIDSLCKDRQLTEALSLFSDML 221

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   + +T + L+   C  G + +A+ +F  +I    + D+  F+ L+ A  K G V 
Sbjct: 222 AKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVV 281

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA  +++ M   +++ +  T+  L+ G   +S + K + +FD M + G       Y  +I
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLI 341

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G CK + ++ A+ L+ EM   G+ PD    + LI      G L          RD    
Sbjct: 342 NGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL----------RDAI-- 389

Query: 273 TLLCNSIMRILVSNGSIDQ--AYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                ++   +V  G I     Y +L   + K   +A+  V + +I    + P+   + I
Sbjct: 390 -----ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ + + G+L+ A  LF +++  G   +V  Y  +I+GLC    L E+ +L  EM+E+G
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T N + R   R  + + A+ L ++M  +G    V   TLL++ L   G      
Sbjct: 505 CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVK 564

Query: 450 RFLTDMVQ 457
           + L + VQ
Sbjct: 565 QILCEFVQ 572


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 274/604 (45%), Gaps = 51/604 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S+N ++   CK   VD+ +     M  +G   D Y+   L+   C +G   +AL +
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            N++ +HG   + V ++IL   F   G ++ A  +I++M       N  T+ VLI G  +
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V++AL+L+ +M   GF        V++G LCK++Q+++A +L+ EM+ +G+ PD   
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI     +GE                                 + QA  L + M   
Sbjct: 459 YSTLIHGLCKQGE---------------------------------VQQAILLYEKMCSN 485

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             I                PN+     I+  L + GK+  A   F  +       ++ LY
Sbjct: 486 RII----------------PNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDG        E+ +L +++ E G  PT  T NS+    C  + +  A  L+  +++
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G EP     T L+   C+ G        L++M  +   P  + Y+  I GL    ++  
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           + +L  D+ A G  PD V+YN II   CKA+ + +A  L+++M+   L P+  TYN+LIN
Sbjct: 650 SCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILIN 709

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+C  G++  A   L   L+    + +   YTT+I   C  G  D A++ + +M EKG  
Sbjct: 710 GFCVYGDLKDADNLLVS-LQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFE 768

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            +   + A+I  LCK      A   F MM   G+ PD  +F  L++AF    +    FE+
Sbjct: 769 VSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFEL 828

Query: 663 LKEM 666
           L EM
Sbjct: 829 LAEM 832



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 241/548 (43%), Gaps = 51/548 (9%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF----------------------- 173
           V+ +L  A+S+   V  A  ++ +M D N  ++ +T+                       
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVS 240

Query: 174 ---------CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
                     +++ G  ++SR   A+  F       F      ++ I+   CK   +++A
Sbjct: 241 GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVA 300

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
              +  M   G+ PD    + LI      G +   L +K   E+  +    +  N + + 
Sbjct: 301 KSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKG 360

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G I+ A+N++Q M+   P                +PN  ++ ++I    + G ++ 
Sbjct: 361 FRLLGLINGAWNIIQKMLIKGP----------------NPNLVTYTVLICGHCQIGNVEE 404

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL L++EM   G   ++     L+  LC S +++ +++L  EME +G +P   T +++  
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC++ +V  A+ L  KM      P    +  ++  LC+ GK  +A  +   ++      
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL 524

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           DI+ Y+  I G I       A++L++ +   G  P +V +N ++ G C  +++++A  L 
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + +   GL P+  TY  L+N +C+ GN+   +  LS M  K  G P  ITYT +I GLC 
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG-PTHITYTVVIKGLCK 643

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             +  ++  L  +M+  G  P+++++  +I   CK    R A   +  M    ++P    
Sbjct: 644 QWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVT 703

Query: 643 FVALISAF 650
           +  LI+ F
Sbjct: 704 YNILINGF 711



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 245/559 (43%), Gaps = 57/559 (10%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-----------------DLV 85
           +G V+ A   F  + + GL +P+ YSYN L+  LC + S+                 D+V
Sbjct: 294 LGFVDVAKSFFCMMLKHGL-LPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMV 352

Query: 86  E-------MRLKEMQDYGWGY-----------DKYTLTPLLQVYCNSGQFDKALSVFNEI 127
                    RL  + +  W             +  T T L+  +C  G  ++AL ++ E+
Sbjct: 353 TYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEM 412

Query: 128 IDHGWVDEHVFS-ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           I HG+    + S +LL +  K  +VD A +L   M+   +R +  T+  LIHG  K+  V
Sbjct: 413 ISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEV 472

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            +A+ L++KM  +    ++ ++  I+ GLC+  ++  A   +  +  S ++ D  + + +
Sbjct: 473 QQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIM 532

Query: 247 ITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I      G   E   L K++ E + ++   +  NS+M     N  + QA  LL      +
Sbjct: 533 IDGYIKRGNTREAVKLYKQLGE-KGISPTIVTFNSLMYGFCINRKLSQARRLL------D 585

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            I   G+E          PN  ++  ++N   ++G +   L L  EM           Y 
Sbjct: 586 TIKLHGLE----------PNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYT 635

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +I GLC   +L+ES +LL +M+  G  P   + N++ +  C+ +D+  A  L  KM + 
Sbjct: 636 VVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLH 695

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             EP      +LI   C +G   +A   L  +       +   Y+  I        VD A
Sbjct: 696 NLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKA 755

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +  FR +   G    +  Y+ +I  LCK   V EA+  F  M++ G+ P    + +L+N 
Sbjct: 756 VVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815

Query: 544 WCKSGNIDQAMLCLSRMLE 562
           + + G+++     L+ M++
Sbjct: 816 FHQCGHLNSEFELLAEMIK 834



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 37/358 (10%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +  +M  +  + ++  YN+L+  L +SN + + Y    E++ SG   + +T + +  
Sbjct: 198 ALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYN---EIKVSGTPQSEYTSSIVVD 254

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LCR+     A+   +    +  +P V     ++   CK G    A  F   M++ G LP
Sbjct: 255 GLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLP 314

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D   Y+  I GL     +  AL+L  D+  HG  PD+V YNI+  G      +  A ++ 
Sbjct: 315 DAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNII 374

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAM------------------------LCLS 558
            +M+ KG  P++ TY +LI G C+ GN+++A+                        LC S
Sbjct: 375 QKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKS 434

Query: 559 RM----------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           R           +E     PD+ITY+TLI GLC  G    AI+L+ +M      PN +  
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIH 494

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A++ GLC+  +   A ++F  +    +  D+ ++  +I  ++   N   A ++ K++
Sbjct: 495 GAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 187/459 (40%), Gaps = 34/459 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLK---EMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           PN  +Y  L+   C  C +  VE  LK   EM  +G+     + T LL   C S Q D A
Sbjct: 384 PNLVTYTVLI---CGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVA 440

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F E+  +G   D   +S L+    K GEV +A  L E+M    I  N      ++ G
Sbjct: 441 FKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMG 500

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             +K ++ +A   FD +  S  + D  +Y+++I G  K      A++LY ++   GI+P 
Sbjct: 501 LCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560

Query: 240 FEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               + L+       +L+    LL        + N +T    ++M +    G++     L
Sbjct: 561 IVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTY--TTLMNVYCEEGNMQSLLEL 618

Query: 296 LQAMIKGEPIADVGVEMLMIFKGT--------------------VSPNTSSFDIIINTLL 335
           L  M K + I    +   ++ KG                     ++P+  S++ II    
Sbjct: 619 LSEM-KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K   +  A  L+ +M           YN LI+G C    L+++  LL  ++        +
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKY 737

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
              ++ +  C + DV  A+   R+M  +G E  ++  + +I  LCK     EA  F   M
Sbjct: 738 AYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMM 797

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           + +G  PD   +   +        ++   EL  ++   G
Sbjct: 798 LSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 7/242 (2%)

Query: 428 WVKHNTLLIKELCKHGKAM---EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           W   N +     C + ++    +A   L  M    F+  I  Y++    L +++  ++  
Sbjct: 175 WDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSL---LYNLRHSNIMW 231

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +++ +I   G        +I++ GLC+  R  +A   F +   K   PSV ++N +++ +
Sbjct: 232 DVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRY 291

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +D A      ML K    PD  +Y  LI GLCIAG   +A+ L N+ME  G  P+
Sbjct: 292 CKLGFVDVAKSFFCMML-KHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T+  L  G         A    + M  KG  P++  +  LI       N   A ++ K
Sbjct: 351 MVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 665 EM 666
           EM
Sbjct: 411 EM 412



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 151/368 (41%), Gaps = 26/368 (7%)

Query: 30  PGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P +L  G ++  L   G + +A M FD +    L + +   YN +++   K  +      
Sbjct: 489 PNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL-DIILYNIMIDGYIKRGNTREAVK 547

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
             K++ + G      T   L+  +C + +  +A  + + I  HG     V ++ L+  + 
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + G +    EL+  M    I     T+ V+I G  K+ ++ ++ QL + M   G   D  
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKE 262
            Y+ II   CK + +  A QLY +M    + P     + LI      G+L     LLV  
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVS- 726

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             ++R VN       +I++   + G +D+A    + M++       G E+          
Sbjct: 727 -LQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEK------GFEV---------- 769

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +   +  +I  L K   +  A   F  M   G   +  L+  L++       L   +ELL
Sbjct: 770 SIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829

Query: 383 REMEESGF 390
            EM +SG+
Sbjct: 830 AEMIKSGW 837


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 291/629 (46%), Gaps = 46/629 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YNCL++A  K+  +D   +  +EM       D +TL       C  G++ +AL++
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292

Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                   +V + VF   L++   +    ++A + + RM   +   N  T+  L+ G + 
Sbjct: 293 MET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++ + M   G      +++ ++   C +     A +L  +M   G TP + +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVV 409

Query: 243 LSKLITS-CSDEGELTLLVKEIWEDRDVNTMT-------LLCNSIMRILVSNGSIDQAYN 294
            + LI S C D+  L+  + E+ E      +        +  +S  R L S G  ++A++
Sbjct: 410 YNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +++ MI                +G + P+TS++  ++  L    K++LA  LF EM + G
Sbjct: 470 VIREMIG---------------QGFI-PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGG 513

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  ++D  C +  +E++ +   EM E G  P   T  ++     + + V  A 
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI---------- 464
            L   M  +G  P +   + LI   CK G+  +A +    M     +PD+          
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDD 633

Query: 465 -------VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
                  V Y A + G   + RV+ A +L   +   GC P+ + Y+ +I GLCK  ++ E
Sbjct: 634 NSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 693

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+++  EM   G   ++ TY+ LI+ + K    D A   LS+MLE  S +P+V+ YT +I
Sbjct: 694 AQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMI 752

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DGLC  G+ D+A  L   MEEKGC PN +T+ A+I G  +  +    L     M  KG+ 
Sbjct: 753 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVA 812

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+   +  LI          +A  +L+EM
Sbjct: 813 PNYVTYRVLIDHCCKNGALDVAHNLLEEM 841



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 164/650 (25%), Positives = 278/650 (42%), Gaps = 95/650 (14%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L++ + +     + E  L++++D         L  L++ YC SG F  AL     + 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D  +      ++ L+ AF K   +D A  +   M   N+R++  T     +   K  +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWR 287

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL L   M    F  D   Y  +I GLC+    E A+   + M+ +   P+    S L+
Sbjct: 288 EALTL---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL--------LCNSIMRILVSNGSIDQAYNLLQAM 299
             C ++ +L          R +N M +        + NS++    ++G    AY LL+ M
Sbjct: 345 CGCLNKKQLGRC------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 300 IK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK------LDLALSLFREMTQ 352
           +K G                  +P    ++I+I ++  D        L+LA   + EM  
Sbjct: 399 VKCGH-----------------TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + N    ++    LC++ + E+++ ++REM   GF P   T + +   LC    +  
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L  +M+  G    V   T+++   CK G   +A ++  +M + G  P++V Y+A I 
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI- 531
             +  K+V  A ELF  + + GC P++V Y+ +I G CKA ++ +A  +F  M     + 
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVP 621

Query: 532 ----------------PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
                           P+V  Y  L++G+CK   +++A   L  M   E   P+ I Y  
Sbjct: 622 DVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM-SMEGCEPNQIVYDA 680

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKG----------------------------------- 600
           LIDGLC  G+ D+A  +  EM E G                                   
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           CAPN + +  +I GLCK  +   A    +MM+EKG +P++  + A+I  F
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 173/651 (26%), Positives = 288/651 (44%), Gaps = 92/651 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-----SC 80
           C+ SP     L+    + G    A  L  ++ + G   P    YN L+ ++C      SC
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-TPGYVVYNILIGSICGDKDSLSC 426

Query: 81  SV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
            + +L E    EM   G   +K  ++   +  C++G+++KA SV  E+I  G++ D   +
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S +L       +++ A  L E M    +  +  T+ +++  F K   +++A + F++M +
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   +   Y  +I    K K++  A +L+  M   G  P+    S LI     +G    
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI-----DGH--- 598

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                            C +        G +++A  + + M   + + DV     M FK 
Sbjct: 599 -----------------CKA--------GQMEKACQIFERMCGSKDVPDVD----MYFKQ 629

Query: 319 TVSPNTSSFDIIINTLLKDG-----KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
               N+   +++I   L DG     +++ A  L   M+  GC  N  +Y+ LIDGLC   
Sbjct: 630 YDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 689

Query: 374 RLEESYELLREMEESGFKPTHFTLNSM----FRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           +L+E+ E+  EM E GF  T +T +S+    F+   +RQD+  A  ++ KM      P V
Sbjct: 690 KLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKV--KRQDL--ASKVLSKMLENSCAPNV 745

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              T +I  LCK GK  EA++ +  M ++G  P++V Y+A I G   I +++  LEL   
Sbjct: 746 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLER 805

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS-- 547
           + + G  P+ V Y ++I   CK   +  A +L  EM         A Y  +I G+ K   
Sbjct: 806 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFI 865

Query: 548 ---------GNIDQA-MLCLSRML------------------EKESGSPDVI----TYTT 575
                    G  D A  L L R+L                  E  + S  ++    TY +
Sbjct: 866 ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 925

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           LI+ LC+A + D A  L++EM +KG  P   TF +LI GL +  +   AL+
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALL 976



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 234/533 (43%), Gaps = 74/533 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E A +LF+++KR GL V + Y+Y  ++++ CK+  ++       EM++ G   +  T T
Sbjct: 499 MELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V +S L+    K G+++KAC++ ERM   
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGS 617

Query: 162 --------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                         DD + R N   +  L+ GF K  RV++A +L D M+  G   +  +
Sbjct: 618 KDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIV 677

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           YD +I GLCK  +L+ A ++ +EM   G        S LI                  DR
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI------------------DR 719

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                                 D A  +L  M++                 + +PN   +
Sbjct: 720 YFKV---------------KRQDLASKVLSKMLEN----------------SCAPNVVIY 748

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+ L K GK D A  L + M + GC  NV  Y  +IDG     ++E   ELL  M  
Sbjct: 749 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGS 808

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-M 446
            G  P + T   +    C+   +  A NL+ +M+ Q H  W  H     K +    K  +
Sbjct: 809 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH--WPTHAAGYRKVIEGFNKEFI 865

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNI 504
           E+   L ++ Q+   P +  Y   +  LI  +R+++AL L  ++             YN 
Sbjct: 866 ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 925

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +I  LC A +V +A  LF+EM  KG+IP + T+  LI G  ++  I +A+L L
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 238/607 (39%), Gaps = 77/607 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L    L EEA M F    R   C+PN  +Y+ LL        +   +  L  M   
Sbjct: 308 LISGLCEASLFEEA-MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDK-A 154
           G          L+  YC SG    A  +  +++  G    +V   +L+  S  G+ D  +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIG-SICGDKDSLS 425

Query: 155 CELIE-------RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           C L+E        M    + LN+              + +KA  +  +M   GF  D + 
Sbjct: 426 CHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++G LC   ++E+A  L+ EMK  G+  D    + ++ S    G +    K   E R
Sbjct: 486 YSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V                  ++     L+ A +K + ++        +      PN  ++
Sbjct: 546 EVGC--------------TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 328 DIIINTLLKDGKLDLALSLFREM-----------------TQIGCMQNVFLYNNLIDGLC 370
             +I+   K G+++ A  +F  M                        NV +Y  L+DG C
Sbjct: 592 SALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFC 651

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             +R+EE+ +LL  M   G +P     ++                               
Sbjct: 652 KLHRVEEARKLLDAMSMEGCEPNQIVYDA------------------------------- 680

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI  LCK GK  EA     +M + GF   +  YS+ I     +KR DLA ++   +
Sbjct: 681 ----LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 736

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             + C P+VV Y  +I GLCK  +  EA  L   M  KG  P+V TY  +I+G+ + G I
Sbjct: 737 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKI 796

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           +  +  L RM  K   +P+ +TY  LID  C  G  D A  L  EM++     +   +  
Sbjct: 797 ETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 611 LITGLCK 617
           +I G  K
Sbjct: 856 VIEGFNK 862



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 143/358 (39%), Gaps = 49/358 (13%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           QIG      +YN L+D +   +  +   ELL+++ +   +     LN + R  CR     
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFS 217

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIK---------------------------------- 437
            AL  + +++     P       LI+                                  
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277

Query: 438 -ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK  EA   LT M  E F+PD V Y+  I GL +    + A++    + A  C 
Sbjct: 278 YSLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y+ ++ G    +++   + + N M+ +G  PS   +N L++ +C SG+   A   
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD--------AIMLWNEMEEKGCAPNRITF 608
           L +M+ K   +P  + Y  LI  +C  G  D         A   ++EM   G   N+I  
Sbjct: 395 LKKMV-KCGHTPGYVVYNILIGSIC--GDKDSLSCHLLELAEKAYSEMLATGVVLNKINV 451

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    LC   +   A    R M  +G  PD   +  ++    +     LAF + +EM
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM 509



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 37/195 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I   G +G +E    L +++  +G+  PN  +Y  L++  CK+ ++D+    L+EM+  
Sbjct: 786 MIDGFGRIGKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 844

Query: 96  GW-----GYDKYT------LTPLLQVYCNSGQFDKA--LSVFNEIIDHGWVDEHV----- 137
            W     GY K            L +    GQ D A  LS++  ++D+    + +     
Sbjct: 845 HWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALR 904

Query: 138 -------FSILLVAFSKW-----------GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                  FS  LV +S              +VDKA  L   M    +    +TFC LI G
Sbjct: 905 LLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKG 964

Query: 180 FVKKSRVDKALQLFD 194
             + S++ +AL L D
Sbjct: 965 LFRNSKISEALLLLD 979


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 162/574 (28%), Positives = 264/574 (45%), Gaps = 60/574 (10%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHGWVDEHVFSILLVAFSKWGEVDK 153
           +G+ +  +T   LL V+  + +  +A ++  NE+      D   +++L+  +    E ++
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEE 172

Query: 154 ACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           A  +I  M+ D  +  + KT  +++HG  K  +V  A+  F+ + +S     AA + ++I
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILI 231

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            GL K   +  A  L  E   +G T D    + ++                W        
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN---------------W-------- 268

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                     L  N  I +A  L++                 I     +P  ++++ ++N
Sbjct: 269 ----------LAKNKKIQEAVALMEK----------------ITANGCTPTIATYNALLN 302

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G+L+ A+ L R++   GC  +V  Y +LIDGL    R  E+Y+L +EM   G   
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                 ++ R L +   +  A ++ + M   G  P V   + +I  L K G+   A R  
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 422

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M   G  P+ V YSA I GL   +++D ALE+   +    C PD + YNI+I GLCK+
Sbjct: 423 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 482

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
             V  A   F+EM+  G  P V TYN+LI+G CK+GN D A   L  M      S     
Sbjct: 483 GDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM------SSSRFV 536

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++L+DGLC +G+ +   ML++EME  G A N  T   LI  LCK +R   A+  F  ++
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIR 595

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++GM P  + + ++ISA +          V +EM
Sbjct: 596 KEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 628



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 246/544 (45%), Gaps = 30/544 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  ++N L+   C +   +     ++EM+ D+G      T   +L   C SG+   A+ 
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            F  +     V    FSIL+    K G + +A  L +        ++  T+  +++   K
Sbjct: 212 HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK 271

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             ++ +A+ L +K+T +G     A Y+ ++ GLCK  +LE A+ L  ++  +G TPD   
Sbjct: 272 NKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 331

Query: 243 LSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI     E    E   L KE+   R +   T+   +++R L+  G I QA ++ + M
Sbjct: 332 YTSLIDGLGKEKRSFEAYKLFKEM-ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                             G V P+  +   +I+ L K G++  A+ +F+ M   G   N 
Sbjct: 391 TS---------------HGCV-PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y+ LI GLC + +++ + E+L +M+++   P   T N +   LC+  DV  A     +
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G +P V    +LI  LCK G    A   L DM    F+     YS+ + GL    +
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGK 549

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++    LF ++   G         +I   LCKA RV EA  LFN +  +G+ P    YN 
Sbjct: 550 LEGGCMLFHEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGM-PHPYAYNS 607

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+   KSG +++       M       PD +TY  L++G+  A R D A   + EM  +
Sbjct: 608 IISALIKSGKVNEGQAVYQEM--TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGR 665

Query: 600 GCAP 603
           G  P
Sbjct: 666 GYVP 669



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 172/370 (46%), Gaps = 42/370 (11%)

Query: 335 LKDGKLDLALSLFREMT--QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           LKD   DLA  LF+ ++  + G   +V   N L+D    + R  E+  LL+    + F+P
Sbjct: 95  LKDA--DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRP 152

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEAFRF 451
              T N +    C  ++   A  ++R+M    G  P +K + L++  LCK GK + A   
Sbjct: 153 DVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDH 212

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             + V+         +S  I GL+    +  A  L ++   +GC  D+  Y  I++ L K
Sbjct: 213 F-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK 271

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            +++ EA  L  ++   G  P++ATYN L+NG CK G +++A+  L ++++    +PDV+
Sbjct: 272 NKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVV 330

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEK-------------------------------- 599
           TYT+LIDGL    R  +A  L+ EM  +                                
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 600 ---GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
              GC P+ +T   +I GL K  R  AA+  F+ M+ +G+ P+  V+ ALI         
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450

Query: 657 PLAFEVLKEM 666
             A E+L +M
Sbjct: 451 DCALEMLAQM 460



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 209/484 (43%), Gaps = 59/484 (12%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           LAQ+   + C +       ++  L     ++EA  L +++   G C P   +YN LL  L
Sbjct: 246 LAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG-CTPTIATYNALLNGL 304

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           CK   ++     L+++ D G   D  T T L+       +  +A  +F E+   G  +D 
Sbjct: 305 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDT 364

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++ L+    + G++ +A  + + M       +  T   +I G  K  R+  A+++F  
Sbjct: 365 VCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 424

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G A +  +Y  +I GLCK ++++ AL++ ++MK +  TPD                
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD---------------- 468

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                            T+  N ++  L  +G ++ A      M++              
Sbjct: 469 -----------------TITYNILIDGLCKSGDVEAARAFFDEMLEA------------- 498

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  +++I+I+ L K G  D A  +  +M+      + F+Y++L+DGLC S +L
Sbjct: 499 ---GCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKL 550

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           E    L  EME SG   +      +F  LC+   V  A++L   +R +G      +N++ 
Sbjct: 551 EGGCMLFHEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGMPHPYAYNSI- 608

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  L K GK  E      +M +  + PD V Y+A + G+I   R+D A   + ++   G 
Sbjct: 609 ISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667

Query: 496 CPDV 499
            P V
Sbjct: 668 VPPV 671


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 276/609 (45%), Gaps = 59/609 (9%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P A+  L R L   G       LF  V R+G C PNN+++N L+   C+     + E  
Sbjct: 221 NPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPC-PNNFTFNLLILEFCRKGWTRIGEAL 279

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSK 147
           L  M  +    D Y+   ++   C  GQ   AL + N +I++G       F  ++ AF K
Sbjct: 280 LHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCK 339

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM----------- 196
            G V+ A +  + ++D  +  N   + ++I G+VK   + +A  LF++M           
Sbjct: 340 EGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGIT 399

Query: 197 ------------------------TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
                                   + SG   D+++ DV + GLC   + + A++L   + 
Sbjct: 400 FNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLL 459

Query: 233 GSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
             GI P     + +I +  + G  E       I     +   +  C+S++  LV  GS+D
Sbjct: 460 EKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLD 519

Query: 291 QAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           +A+  L  MI KG P+ ++                 +F ++++   + G +++A SL+ E
Sbjct: 520 EAWIALYDMIDKGFPVTNM-----------------AFTVLLDGYFRIGAVNMAESLWNE 562

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +   +   I+GLC S  + ++Y++  +M   GF P +F  NS+    C+   
Sbjct: 563 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 622

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL LVR+M  +G  P +    ++I  LCK G+   A     DM + G  PDIV Y+ 
Sbjct: 623 LNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNT 682

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      V  A +L   +   G  PD+  YNI I G C  +++  A  +  E+I+ G
Sbjct: 683 LIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 742

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           ++P+  TYN +IN  C    +D AM+  +++L K +  P+ +T   L+   C  G P+ A
Sbjct: 743 IVPNTVTYNTMINAVCNV-ILDHAMILTAKLL-KMAFVPNTVTVNVLLSQFCKQGMPEKA 800

Query: 590 IMLWNEMEE 598
           I    ++ E
Sbjct: 801 IFWGQKLSE 809



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 260/612 (42%), Gaps = 73/612 (11%)

Query: 88  RLKEMQDYGW-GYDKY-----TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSI 140
           R K +  + W G+  Y      L  L+Q +  S    +AL + +++ + G   +    SI
Sbjct: 168 RSKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISI 227

Query: 141 LLVAFSKWGEVDKACEL---IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           L     + G+     +L   + R   C    N  TF +LI  F +K        L   M 
Sbjct: 228 LFRLLIRAGDCGAVWKLFGDVVRKGPCP---NNFTFNLLILEFCRKGWTRIGEALLHVMG 284

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K     D   Y+++I   C   Q   AL L + M  +G  P       +I +   EG + 
Sbjct: 285 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVE 344

Query: 258 LLVK---EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           L  K   EI ED  ++  T++ N ++   V    I QA NLL   ++ + I         
Sbjct: 345 LARKYFDEI-EDMGLSQNTIVYNIMISGYVKARDISQA-NLLFEEMRTKDIV-------- 394

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  P+  +F+ ++    + GK +    L R+++  G + +  L +  + GLC + R
Sbjct: 395 -------PDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGR 447

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            +E+ +LL  + E G  P+    NS+            A      M   G  P     + 
Sbjct: 448 YDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSS 507

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+  L + G   EA+  L DM+ +GF    + ++  + G   I  V++A  L+ ++   G
Sbjct: 508 LLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRG 567

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD VA+   I+GLC +  + +A D+F++M+ KG +P+   YN LI G+CK G +++A+
Sbjct: 568 VFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEAL 627

Query: 555 LCLSRMLEK-----------------ESG-----------------SPDVITYTTLIDGL 580
             +  M ++                 + G                 SPD++TY TLIDG 
Sbjct: 628 KLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGY 687

Query: 581 CIA---GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           C A   G  DD +M   +M + G  P+  T+   I G C   +   A++    +   G+ 
Sbjct: 688 CKAFDVGGADDLMM---KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 744

Query: 638 PDMFVFVALISA 649
           P+   +  +I+A
Sbjct: 745 PNTVTYNTMINA 756



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 214/505 (42%), Gaps = 58/505 (11%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELT 257
           + SD ++ D ++    K++    AL++ S+M+  G+TP+     IL +L+    D G   
Sbjct: 183 YESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA-- 240

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF- 316
                +W+        L  + + +    N   +  +NLL      +    +G  +L +  
Sbjct: 241 -----VWK--------LFGDVVRKGPCPN---NFTFNLLILEFCRKGWTRIGEALLHVMG 284

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K    P+  S++I+IN     G+   AL L   M + GC  ++  +  +ID  C    +E
Sbjct: 285 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVE 344

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLL 435
            + +   E+E+ G        N M     + +D+  A  L  +MR +   P  +  NTL+
Sbjct: 345 LARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLV 404

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
                ++GK  +  R L D+   G L D       + GL    R D A++L  ++   G 
Sbjct: 405 AGHY-RYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGI 463

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P VVA+N II+    A     A   +  M+  GL PS +T + L+    + G++D+A +
Sbjct: 464 PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 523

Query: 556 CLSRMLEK----------------------------------ESGSPDVITYTTLIDGLC 581
            L  M++K                                      PD + +   I+GLC
Sbjct: 524 ALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLC 583

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           I+G   DA  ++++M  KG  PN   + +LI G CK  +   AL   R M ++G+ PD+F
Sbjct: 584 ISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIF 643

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               +I     +    LA E   +M
Sbjct: 644 TVNMIICGLCKQGRMKLAIETFMDM 668



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 28/351 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + F  +I   G+ GL E A   +  + + GL  P++ + + LL +L +  S+D  
Sbjct: 463 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGL-TPSSSTCSSLLISLVRKGSLDEA 521

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            + L +M D G+       T LL  Y   G  + A S++NE+   G + D   F+  +  
Sbjct: 522 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 581

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G +  A ++   M       N   +  LI GF K  ++++AL+L  +M K G   D
Sbjct: 582 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 641

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVK 261
               ++II GLCK  ++++A++ + +M   G++PD    + LI       D G    L+ 
Sbjct: 642 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 701

Query: 262 EI----WED---------------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           ++    WE                R +N   ++   ++ + +   ++   YN +   +  
Sbjct: 702 KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTV--TYNTMINAVCN 759

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             +    +    + K    PNT + +++++   K G  + A+   +++++I
Sbjct: 760 VILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEI 810


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 176/628 (28%), Positives = 284/628 (45%), Gaps = 17/628 (2%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + +A   FD +  +G C PN  +YN L+   CK   VD      + M   G+  D +T
Sbjct: 295 GRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  YC  G+   AL +F  ++      + +   ILL      GE++ A    + M 
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +    +    + ++IHG  K  +V+KA +LF ++   G   DA  Y ++I GLCKN    
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473

Query: 223 MALQLYSEMKGSGITPDFEILS-KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            A +L   MK  GI          L    S   E++L ++EIWE    N   +    ++ 
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWM--QRLIP 531

Query: 282 ILVSN---GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I  S+   G + + Y LL+     E        +   F G  + +   +   +   L   
Sbjct: 532 IAFSSSVKGFVRRHYLLLERGNNPE------TSLSRSFSG--ASHHHHYRERLRNELHCI 583

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D A SLF EM Q   + ++  +  ++  +   N+ +    L  +ME  G     ++  
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +  C CR   +  AL L+ KM   G  P +     L+   C+  +  EA   +  M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+P++V Y+  I GL   + ++ ALE+F  +   G   D V YN +ISGL  + R  +A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             L  +M+ + + P+V  +  LI+ + K GN+ +A      M+ + S  P+V TY +LI+
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLIN 822

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G CI G   DA  +++ M  KGC P+ +T+  LITG CK  R    +  F  M  +G+  
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D F +  LI  +       +A +V   M
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRM 910



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 175/328 (53%), Gaps = 1/328 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  +   A+SL   M   G + NV +YN +I+GLC +  L  + E+
Sbjct: 672 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 731

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              ME+ G +    T N++   L        A  L+R M  +  +P V   T LI    K
Sbjct: 732 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G  +EA     +M++   +P++  Y++ I G      +  A  +F  + + GC PDVV 
Sbjct: 792 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 851

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CK++RV +   LF EM  +GL+    TYN LI+G+C++G ++ A    +RM+
Sbjct: 852 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 911

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD++TY  L+D LC  G+ + A+++  ++++     + IT+  +I GLC+ D+ 
Sbjct: 912 DC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 970

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISA 649
           + A   FR +  KG+KPD   ++ +IS 
Sbjct: 971 KEAWCLFRSLTRKGVKPDAIAYITMISG 998



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 169/655 (25%), Positives = 296/655 (45%), Gaps = 39/655 (5%)

Query: 20   DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
            D+ +S  ++   A   +I  L     VE+A  LF ++  EG+  P+  +Y  ++  LCK+
Sbjct: 411  DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV-KPDARTYTIMILGLCKN 469

Query: 80   CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS 139
                  +  ++ M++ G           L+ + +S + + +LS+  EI +    +     
Sbjct: 470  GPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK-EISLSL-REIWERSKSNPFWMQ 527

Query: 140  ILL-VAFSKW--GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV---------D 187
             L+ +AFS    G V +   L+ER ++    L+ ++F    H    + R+         D
Sbjct: 528  RLIPIAFSSSVKGFVRRHYLLLERGNNPETSLS-RSFSGASHHHHYRERLRNELHCIKFD 586

Query: 188  KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILS 244
             A  LF +M +S        +  ++  + K  + ++ + LY +M+  GI+ D   F IL 
Sbjct: 587  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646

Query: 245  KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                 CS       L+ ++ +                 L    SI    +LL    +G  
Sbjct: 647  HCFCRCSRLSLALALLGKMMK-----------------LGFRPSIVTLGSLLNGFCQGNR 689

Query: 305  IADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
              +  V ++    G    PN   ++ +IN L K+  L+ AL +F  M + G   +   YN
Sbjct: 690  FQE-AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 748

Query: 364  NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
             LI GL NS R  ++  LLR+M +    P      ++     +  +++ A NL ++M  +
Sbjct: 749  TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 808

Query: 424  GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
               P V     LI   C HG   +A      MV +G  PD+V Y+  I G    KRV+  
Sbjct: 809  SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 868

Query: 484  LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            ++LF ++   G   D   YN +I G C+A ++  A+ +FN M+  G+ P + TYN+L++ 
Sbjct: 869  MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 928

Query: 544  WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             C +G I++A++ +   L+K     D+ITY  +I GLC   +  +A  L+  +  KG  P
Sbjct: 929  LCNNGKIEKALVMVED-LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 987

Query: 604  NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            + I ++ +I+GLC+    R A    R MKE G  P   ++   +    + L+  L
Sbjct: 988  DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAEL 1042



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 159/659 (24%), Positives = 269/659 (40%), Gaps = 104/659 (15%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L S+   +   + F+ V  + L  P+   +  LL A       + V    ++M+ YG  +
Sbjct: 47  LHSIRFEDAFALFFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D Y+ T L+  +C   +   ALSV  +++  G+    V                      
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIV---------------------- 142

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       TF  L+HGF   +R+  A  L   M KSG+  +  +Y+ +I GLCKN 
Sbjct: 143 ------------TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCN 277
           +L +AL+L +EM+  G+  D    + L+T     G  +   + + +   R +N   +   
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++ + V  G++D+A  L + MI+                 +V PN  +++ IIN L   
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQS----------------SVDPNNVTYNSIINGLCMH 294

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+L  A   F  M   GC  NV  YN LI G C    ++E  +L + M   GF    FT 
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++    C+   +  AL++   M  +   P +  + +L+  LC +G+   A     DM +
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
                 IV Y+  I GL    +V+ A ELF  +   G  PD   Y I+I GLCK     E
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP------DVI 571
           A++L   M  +G+I  +   +  +     S    +  L L  + E+   +P        I
Sbjct: 475 ADELIRRMKEEGIICQMNAEDDHLEEHSSSNK--EISLSLREIWERSKSNPFWMQRLIPI 532

Query: 572 TYTTLIDGL----------------------------------------CIAGRPDDAIM 591
            +++ + G                                         CI  + DDA  
Sbjct: 533 AFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCI--KFDDAFS 590

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           L+ EM +    P+ + F  ++T + K ++    +  +  M+  G+  D++ F  LI  F
Sbjct: 591 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 649



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 220/463 (47%), Gaps = 25/463 (5%)

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF+   R + A  LF +M  S        +  ++      ++ E  +    +M+  GI+ 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 239 D---FEILSKLITSCSD-EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D   F IL      CS     L++L K +    + + +T             GS+   + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF------------GSLLHGFC 152

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+        I D    ++++ K    PN   ++ +I+ L K+G+L++AL L  EM + G
Sbjct: 153 LVNR------IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V  YN L+ GLC S R  ++  +LR+M +    P   T  ++     ++ ++  A 
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 415 NLVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            L ++M     +P  V +N++ I  LC HG+  +A +    M  +G  P++V Y+  I G
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSI-INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
               + VD  ++LF+ +   G   D+  YN +I G C+  ++  A D+F  M+++ + P 
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + T+ +L++G C +G I+ A++    M E E     ++ Y  +I GLC A + + A  L+
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEK-YIGIVAYNIMIHGLCKADKVEKAWELF 444

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
             +  +G  P+  T+  +I GLCK    R A    R MKE+G+
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 205/440 (46%), Gaps = 27/440 (6%)

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD--EGELTLLVKEIWE----DR 267
           G   + + E A  L+ EM  S   P     ++L+T+ ++    E  +   +  E      
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           D+ + T+L +   R       +  A ++L  M+K      +G E          P+  +F
Sbjct: 105 DLYSFTILIHCFCRC----SRLSFALSVLGKMMK------LGYE----------PSIVTF 144

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +++      ++  A SL   M + G   NV +YN LIDGLC +  L  + ELL EME+
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G      T N++   LC       A  ++R M  +   P V   T LI    K G   E
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A     +M+Q    P+ V Y++ I GL    R+  A + F  + + GC P+VV YN +IS
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G CK + V E   LF  M  +G    + TYN LI+G+C+ G +  A+     M+ +   +
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV-T 383

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+IT+  L+ GLC+ G  + A++ +++M E       + +  +I GLCK D+   A   
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443

Query: 628 FRMMKEKGMKPDMFVFVALI 647
           F  +  +G+KPD   +  +I
Sbjct: 444 FCRLPVEGVKPDARTYTIMI 463



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 213/457 (46%), Gaps = 21/457 (4%)

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           + +S +F+ A ++F E++    +   V F+ LL A +     +      ++M+   I  +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             +F +LIH F + SR+  AL +  KM K G+      +  ++ G C   ++  A  L  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            M  SG  P+  + + LI      GEL +   L+ E+ E + +    +  N+++  L  +
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYS 224

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G    A  +L+ M+                K +++P+  +F  +I+  +K G LD A  L
Sbjct: 225 GRWSDAARMLRDMM----------------KRSINPDVVTFTALIDVFVKQGNLDEAQEL 268

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           ++EM Q     N   YN++I+GLC   RL ++ +    M   G  P   T N++    C+
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            + V   + L ++M  +G    +     LI   C+ GK   A      MV     PDI+ 
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   + GL     ++ AL  F D+        +VAYNI+I GLCKA +V +A +LF  + 
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +G+ P   TY ++I G CK+G   +A   + RM E+
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 1/220 (0%)

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +AF    +MV    LP IV ++  +    +++R +  +   + +  +G   D+ ++ I+I
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
              C+  R++ A  +  +M+  G  PS+ T+  L++G+C    I  A   L  ++ K   
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA-FSLVILMVKSGY 172

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+V+ Y TLIDGLC  G  + A+ L NEME+KG   + +T+  L+TGLC   R   A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             R M ++ + PD+  F ALI  F+ + N   A E+ KEM
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 287/653 (43%), Gaps = 67/653 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+   + G+ ++A  +  Q K  G   P   S N L+  L +S  VD+     ++++ +
Sbjct: 155 LIKVCVASGMFDQAFDVLLQTKHCGFA-PQILSCNFLMNRLVESRKVDMAIAIYRQLKAF 213

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   + YT T  ++ +C  G   +A+ VF ++ + G   +   ++  +      G  D  
Sbjct: 214 GLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLG 273

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++++ + +  I ++   + V+I GF  + ++ +A  +  +M K GFA D  +Y  +I G
Sbjct: 274 FKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISG 333

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
            C    L  AL L+ EM   G+  +  ILS ++   S  G  + +  +  E + +     
Sbjct: 334 YCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFD 393

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N +M  L   G +++A  LL  M KG+ +                P+  ++  +I+
Sbjct: 394 EACYNVVMDALCKLGKVEEAVELLVEM-KGKKMV---------------PDIINYTTVIS 437

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
                GK+  AL+++REM  IG   ++  YN L  G   +   +E+  LL  ME  G KP
Sbjct: 438 GYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKP 497

Query: 393 THFTLN-------------------------------SMFRCLCRRQDVVGALNLVRKMR 421
              T N                               +M    C    V  A  L+ ++ 
Sbjct: 498 DTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLS 557

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG          L+  LC  G + +A   L  MV     P ++ YS  IG L     ++
Sbjct: 558 KQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEME 617

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  +   G  PDV+ Y I+I+G C+  ++ EA  +  +M  +G+ P V TY +L+
Sbjct: 618 KAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLL 677

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG---------------SPDVITYTTLIDGLCIAGRP 586
           N  C   ++  +   L  M  KE+                 PDVI YT LID  C     
Sbjct: 678 NN-CSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNI 736

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            DAI L+NEM ++G AP+ +T+ AL++G C     + A+V F  M  KG++PD
Sbjct: 737 QDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPD 789



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 272/605 (44%), Gaps = 51/605 (8%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII------DHGWVD-------- 134
             ++++ G+ +D YT   ++++ C  G   K  S+  EII      D G V+        
Sbjct: 80  FNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDG 139

Query: 135 --EHVFSILLVAFSKW-------GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
                FS+L+             G  D+A +++ +   C       +   L++  V+  +
Sbjct: 140 IANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRK 199

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD A+ ++ ++   G   +   Y + I G C+   L  A+ ++ +M+ SG+TP+    + 
Sbjct: 200 VDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTT 259

Query: 246 LITSCSDEGELTLLVKEIWE------DRDVNTMTLL------------CNSIMRILVSNG 287
            I      G   L  K + +        DV   T++              SI+R +   G
Sbjct: 260 FIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQG 319

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD----GKLDLA 343
                Y +  A+I G  +    ++ L +    VS    +  +I++++L+     G     
Sbjct: 320 FAPDVY-VYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            + F+E  ++G   +   YN ++D LC   ++EE+ ELL EM+     P      ++   
Sbjct: 379 ANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISG 438

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
              +  VV ALN+ R+M+  GH+P +    +L     ++G   EA   L  M  +G  PD
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPD 498

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V ++  I GL    +VD A + F D     C  +   Y+ +++G C+A  V +A  L  
Sbjct: 499 TVTHNMIIEGLCIGGKVDDA-QAFFDNLEEKCLEN---YSAMVNGYCEANHVNKAFALLI 554

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  +G I   A++  L+   C  G+ ++A LCL   +   + +P +I Y+ +I  L  A
Sbjct: 555 RLSKQGRILKKASFFKLLGNLCSEGDSEKA-LCLLETMVALNINPTMIMYSKVIGALFQA 613

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  + A  ++N + ++G AP+ IT+  +I G C+ ++ + A      MK +G++PD+  +
Sbjct: 614 GEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITY 673

Query: 644 VALIS 648
             L++
Sbjct: 674 TVLLN 678



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 213/487 (43%), Gaps = 75/487 (15%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLC---KNKQLEMALQLYSEMKGS---GITPDFEI 242
           A   F+++ +SG++ D   Y  I+  LC    +++L+  L    +  G+   GI   FE 
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L   I + S     ++LV+             + ++++++ V++G  DQA+++L      
Sbjct: 136 LGDGIANES----FSVLVQ-------------VSDALIKVCVASGMFDQAFDVL------ 172

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                     L       +P   S + ++N L++  K+D+A++++R++   G   N + Y
Sbjct: 173 ----------LQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTY 222

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR----------QDVVG 412
              I G C    L E+ ++ R+MEESG  P  F+  +    LC            QDV+ 
Sbjct: 223 TIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVIN 282

Query: 413 AL-------------------------NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           A                          +++R+M  QG  P V     LI   C  G  ++
Sbjct: 283 AKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLK 342

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A     +MV +G   + V  S+ + GL  +         F++    G   D   YN+++ 
Sbjct: 343 ALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMD 402

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LCK  +V EA +L  EM  K ++P +  Y  +I+G+   G +  A L + R ++     
Sbjct: 403 ALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDA-LNIYREMKDIGHK 461

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD++TY  L  G    G   +A+ L N ME +G  P+ +T   +I GLC   +   A   
Sbjct: 462 PDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAF 521

Query: 628 FRMMKEK 634
           F  ++EK
Sbjct: 522 FDNLEEK 528



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/540 (22%), Positives = 229/540 (42%), Gaps = 39/540 (7%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           QDV+ ++  M   A   +IR   S   ++EA  +  +++++G   P+ Y Y  L+   C 
Sbjct: 278 QDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFA-PDVYVYCALISGYCM 336

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
             ++        EM   G   +   L+ +LQ     G   +  + F E    G + DE  
Sbjct: 337 VGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEAC 396

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +++++ A  K G+V++A EL+  M    +  +   +  +I G+  K +V  AL ++ +M 
Sbjct: 397 YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMK 456

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL- 256
             G   D   Y+V+ GG  +N   + AL L + M+  G+ PD    + +I      G++ 
Sbjct: 457 DIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVD 516

Query: 257 -TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                 +  E++ +   + + N           +++A+ LL  + K              
Sbjct: 517 DAQAFFDNLEEKCLENYSAMVNG----YCEANHVNKAFALLIRLSK-------------- 558

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +G +    S F ++ N L  +G  + AL L   M  +     + +Y+ +I  L  +  +
Sbjct: 559 -QGRILKKASFFKLLGN-LCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEM 616

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           E++  +   + + G  P   T   M    CR   +  A +++  M+ +G EP V   T+L
Sbjct: 617 EKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVL 676

Query: 436 IKELCK---------------HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +    K                   M+     ++M      PD++CY+  I        +
Sbjct: 677 LNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNI 736

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A+ LF ++   G  PD V Y  ++SG C    + +A  LF+EM+ KG+ P   T ++L
Sbjct: 737 QDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 143/357 (40%), Gaps = 58/357 (16%)

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC-----RRQDVV--------- 411
           ++ L N   L  SY    +++ESG+    +T  ++ R LC     R+ D +         
Sbjct: 66  LNNLRNEPSLAFSY--FNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDG 123

Query: 412 ----GALNLVRKM----RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
               G +NL   +      +     V+ +  LIK     G   +AF  L      GF P 
Sbjct: 124 NLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQ 183

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+  +  +  L++ ++VD+A+ ++R + A G  P+   Y I I G C+   +AEA D+F 
Sbjct: 184 ILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFR 243

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS------------------------- 558
           +M   G+ P+  +Y   I G C  G  D     L                          
Sbjct: 244 DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303

Query: 559 ---------RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
                    R +EK+  +PDV  Y  LI G C+ G    A+ L +EM  KG   N +   
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +++ GL +          F+  K+ G+  D   +  ++ A         A E+L EM
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM 420


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 270/604 (44%), Gaps = 59/604 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S+N L+   CK  SVD+ +     M  YG   D Y+   LL   C +G  ++AL  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            N++ +HG   + V ++IL   F   G +  A ++++RM    +  +  T+ +LI G  +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              ++++ +L +KM   G       Y V++  LCK+ +++ A+ L  EM+  G+ PD   
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL-- 445

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                                  +  S G++++A  L + M   
Sbjct: 446 ---------------------------------------LTYSRGAVEEAIELYEEMCSK 466

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            + PN+     II+ L + G +  A   F  +T+    + + LY
Sbjct: 467 R----------------IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDG      + E+    +++ E G  PT  T NS+    C++  +  A+ L+  ++V
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     T L+   C+ G     F  L +M  +   P  + Y+  + GL    R+  
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +++L + + A G  PD + YN +I   CKA  + +A  L N+M+   L PS  TYN+LIN
Sbjct: 631 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 690

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C  GN+  A   L   L+ +S     + YTT+I   C  G   +A++ +++M E+G  
Sbjct: 691 GLCVYGNLKDADRLLV-TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFE 749

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            +   + A+I  LCK +    A   F MM   G+ PD  + + +++AF    +P   FE+
Sbjct: 750 VSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEI 809

Query: 663 LKEM 666
              M
Sbjct: 810 FAMM 813



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 10/320 (3%)

Query: 332 NTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           N+LL + +  D+   ++ E+   G  QN +    LIDGLC  +RL+++   LRE     F
Sbjct: 207 NSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEF 266

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P+  + N++    C+   V  A +    M   G  P V    +L+  LC  G   EA  
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  DM   G  PDIV Y+    G   +  +  A ++ + +  +G  PD+V Y I+I G C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +   + E+  L  +M+++GL  S+ TY +L++  CKSG ID+A++ L  M E     PD+
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEM-EVIGLKPDL 445

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY+         G  ++AI L+ EM  K   PN     A+I+GL +      A ++F  
Sbjct: 446 LTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 497

Query: 631 MKEKGMKPDMFVFVALISAF 650
           + +  +  ++ ++  +I  +
Sbjct: 498 VTKSDVAEEIILYNIMIDGY 517



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 151/311 (48%), Gaps = 12/311 (3%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL +  +M  +    ++  YN+L+  L +++ + + Y    E++ SG     +T   +  
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN---EIKASGVPQNEYTNPILID 243

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LCR+  +  A+  +R+   +   P V     L+   CK G    A  F   M++ G LP
Sbjct: 244 GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+  Y+  + GL     ++ ALE   D+  HG  PD+V YNI+ +G      ++ A  + 
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M+  GL P + TY +LI G C+ GNI+++     +ML  +     ++TYT L+  LC 
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS-QGLKLSIVTYTVLLSSLCK 422

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           +GR D+A++L +EME  G  P+ +T+               A+  +  M  K + P+ FV
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFV 474

Query: 643 FVALISAFLSE 653
             A+IS    +
Sbjct: 475 CSAIISGLFEK 485



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/482 (21%), Positives = 194/482 (40%), Gaps = 76/482 (15%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE--MRLKE-MQDYGWGY 99
           +GL+  A  +  ++   GL  P+  +Y  L+   C  C +  +E   +LKE M   G   
Sbjct: 353 LGLISGAWKVVQRMLLNGLN-PDLVTYTILI---CGHCQMGNIEESFKLKEKMLSQGLKL 408

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
              T T LL   C SG+ D+A+ + +E+   G   +      L+ +S+ G V++A EL E
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD------LLTYSR-GAVEEAIELYE 461

Query: 160 RMDDCNIRLNEKTFC--VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            M  C+ R+   +F    +I G  +K  + +A   FD +TKS  A +  +Y+++I G  K
Sbjct: 462 EM--CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 519

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLL 275
              +  A++ Y ++   GI+P     + LI     +G+L   VK  +  +   +   ++ 
Sbjct: 520 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 579

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT---------------- 319
             ++M      G +   +++L  M + + I    +   ++ KG                 
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEM-EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 638

Query: 320 ----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
               + P+  +++ +I +  K   L  A  L  +M Q     +   YN LI+GLC    L
Sbjct: 639 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 698

Query: 376 EESYELL-----------------------------------REMEESGFKPTHFTLNSM 400
           +++  LL                                    +M E GF+ +    +++
Sbjct: 699 KDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAV 758

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC+R  +  A      M   G  P      +++    + G     F     M++ G 
Sbjct: 759 INRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 818

Query: 461 LP 462
           LP
Sbjct: 819 LP 820



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V ++++     +A+ V +A  +  +M    L  S+ATYN L+       N+    +    
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY------NLRHTDIMWDV 222

Query: 560 MLE-KESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             E K SG P +  T   LIDGLC   R  DA+    E   +   P+ ++F AL++G CK
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                 A   F MM + G+ PD++ +  L+   
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGL 315


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 294/610 (48%), Gaps = 58/610 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           +EA   F   +  GL  PN  +YN L++  C+    D  +  L  M   G+  D ++   
Sbjct: 106 DEAESFFLYFETMGLS-PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGT 164

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM-DDC 164
           L+     +G    AL +F+E+ + G   D   ++IL+  F K G++  A E+ ER+    
Sbjct: 165 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 224

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           ++  N  ++ V+I+G  K  + D++ +++ +M K+    D   Y  +I GLC +  L+ A
Sbjct: 225 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 284

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRI 282
            ++Y EM  +G++PD  + + ++      G +   + E+W+  +++     +  N ++R 
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL-ELWKVMEKEGCRTVVSYNILIRG 343

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  N  +D+A ++ + + + +  AD                + ++ ++++ L K+G L+ 
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCAD----------------SMTYGVLVHGLCKNGYLNK 387

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           ALS+  E        + F Y+++I+GLC   RL+E   +L +M + G KP  +  N+   
Sbjct: 388 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNA--- 444

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
                                           +I    +  K  +A RF  +MV +G  P
Sbjct: 445 --------------------------------VINGFVRASKLEDALRFFGNMVSKGCFP 472

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            +V Y+  I GL   +R   A  L +++   G  P+++ Y+++++GLC+ +++  A +L+
Sbjct: 473 TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            + + KG  P V  +N++I+G C SG ++ A+   S M ++    P+++T+ TL++G   
Sbjct: 533 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNC-VPNLVTHNTLMEGFYK 591

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               + A  +W+ + + G  P+ I++   + GLC C R   A+       ++G+ P    
Sbjct: 592 VRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 651

Query: 643 FVALISAFLS 652
           +  L+  +L+
Sbjct: 652 WNILVQGYLA 661



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 269/564 (47%), Gaps = 36/564 (6%)

Query: 109 QVYCNSGQFDKALSVFNEIID-----HGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             Y  +   D+AL +F  + +      G    +     L+  +KW E +      E M  
Sbjct: 61  HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM-- 118

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  N +T+ +LI    +K + DKA +L + M   GF+ D   Y  +I  L KN  +  
Sbjct: 119 -GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTLLCNSI 279
           AL+L+ EM   G+TPD    + LI     +G++ L   EIWE       V       N +
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDI-LNASEIWERLLKGPSVYPNIPSYNVM 236

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTV 320
           +  L   G  D+++ +   M K E   D+     +I                    +  V
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+   ++ ++N  L+ G+++  L L++ M + GC + V  YN LI GL  + +++E+  
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAIS 355

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +   + E        T   +   LC+   +  AL+++ +      +      + +I  LC
Sbjct: 356 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 415

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  E    L  M + G  P+    +A I G +   +++ AL  F ++ + GC P VV
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +I+GL KA+R +EA  L  EM+ KG  P++ TY+LL+NG C+   +D A+    + 
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC-D 619
           LEK    PDV  +  +I GLC +G+ +DA+ L++EM+++ C PN +T   L+ G  K  D
Sbjct: 536 LEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRD 594

Query: 620 RPRAALVHFRMMKEKGMKPDMFVF 643
             RA+ +   ++ + G++PD+  +
Sbjct: 595 FERASKIWDHIL-QYGLQPDIISY 617



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 9/380 (2%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +L    ++++L S  +   A ++  ++ +    +        I K    P      ++ +
Sbjct: 7   SLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPK-----LVAH 61

Query: 333 TLLKDGKLDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
              K+   D AL +F+ M +I GC   +  YN+L++ L  SN+ +E+       E  G  
Sbjct: 62  AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS 121

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N + +  CR++    A  L+  M  QG  P V     LI  L K+G   +A + 
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLC 510
             +M + G  PD+ CY+  I G      +  A E++ R +      P++ +YN++I+GLC
Sbjct: 182 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  +  E+ ++++ M        + TY+ LI+G C SGN+D A      M E    SPDV
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN-GVSPDV 300

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           + Y T+++G   AGR ++ + LW  ME++GC    +++  LI GL +  +   A+  + +
Sbjct: 301 VVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWEL 359

Query: 631 MKEKGMKPDMFVFVALISAF 650
           + EK    D   +  L+   
Sbjct: 360 LPEKDCCADSMTYGVLVHGL 379



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 212/457 (46%), Gaps = 23/457 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +  A+ +++++ +     PN  SYN ++  LCK    D        M+    G D YT
Sbjct: 208 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 267

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L+   C SG  D A  V+ E+ ++G   D  V++ +L  + + G +++  EL + M+
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               R    ++ +LI G  + ++VD+A+ +++ + +    +D+  Y V++ GLCKN  L 
Sbjct: 328 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 386

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIM 280
            AL +  E +      D    S +I     EG L  +  V +            +CN+++
Sbjct: 387 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVI 446

Query: 281 RILVSNGSIDQA------------------YN-LLQAMIKGEPIADVGVEMLMIFKGTVS 321
              V    ++ A                  YN L+  + K E  ++    +  + +    
Sbjct: 447 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWK 506

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++ +++N L +  KLD+AL+L+ +  + G   +V ++N +I GLC+S ++E++ +L
Sbjct: 507 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 566

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM++    P   T N++     + +D   A  +   +   G +P +    + +K LC 
Sbjct: 567 YSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCS 626

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             +  +A  FL D V  G LP  + ++  + G + +K
Sbjct: 627 CHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALK 663



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 1/240 (0%)

Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           AL++ ++M  + G +P ++    L+  L +  K  EA  F       G  P++  Y+  I
Sbjct: 72  ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 131

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
                 K+ D A EL   +   G  PDV +Y  +I+ L K   +++A  LF+EM  +G+ 
Sbjct: 132 KISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 191

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P VA YN+LI+G+ K G+I  A     R+L+  S  P++ +Y  +I+GLC  G+ D++  
Sbjct: 192 PDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFE 251

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +W+ M++     +  T+  LI GLC       A   ++ M E G+ PD+ V+  +++ +L
Sbjct: 252 IWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 311



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 58/128 (45%)

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           L+ + + K+   DQA+    RM E     P + +Y +L++ L  + + D+A   +   E 
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G +PN  T+  LI   C+  +   A      M  +G  PD+F +  LI++         
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177

Query: 659 AFEVLKEM 666
           A ++  EM
Sbjct: 178 ALKLFDEM 185


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 168/626 (26%), Positives = 299/626 (47%), Gaps = 24/626 (3%)

Query: 28   MSPGALGFL--IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A  ++  I   G  G   +A   F+++K +G+ VPN  + N  L +L +   +   
Sbjct: 433  VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREA 491

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            +     +++ G   D  T   +++ Y   GQ D+A+++ +E+I +G   D  V + L+ +
Sbjct: 492  KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              K G VD+A ++ +RM D  +     T+  L+ G  K+ RV KA++LF+ M     + +
Sbjct: 552  LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
               ++ ++   CKN ++E+AL+++S+M      PD    + +I           L+KE  
Sbjct: 612  TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG---------LIKE-- 660

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-VGVEMLMIFKGTVSPN 323
                VN      + + + +  +        LL  ++K   I D + +    +++     N
Sbjct: 661  --NKVNHAFWFFHQLKKSMHPDHVT--ICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 324  TSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYELL 382
             S ++ ++   L + ++D A+    E+   G C ++ FL   L+  LC   R   +Y++ 
Sbjct: 717  RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIF 775

Query: 383  REMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +  +  G  PT  + N +   L        A +L + M+  G  P      +L+    K
Sbjct: 776  DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGK 835

Query: 442  HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             GK  E F    +M+     PD + Y+  I  L     +D AL+ F D+ +    P    
Sbjct: 836  SGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895

Query: 502  YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            Y  +I GL K  R+ EA  LF EM   G  P+ A +N+LING+ K G+ + A     RM+
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955

Query: 562  EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
              E   PD+ +YT L+D LC+AGR D+A+  +NE++  G  P+ I +  +I GL K  R 
Sbjct: 956  -NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 622  RAALVHFRMMKEKGMKPDMFVFVALI 647
              AL  +  M+ +G+ PD++ + +L+
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLM 1040



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 263/585 (44%), Gaps = 52/585 (8%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  + +AL     +  +   L +M+  G+  + Y+   L+ +   SG   +AL V+  +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G       +S L+VA  K  + +    L++ M+D  +R N  TF + I    +  ++
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D+A ++F +M   G   D   Y V+I  LC   QLE A +L+ +MK +G  PD  I   L
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +   +D G+L    KE W   + +                                    
Sbjct: 339 LDKFNDFGDLDTF-KEFWSQMEADGYM--------------------------------- 364

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                          P+  +F I+++ L K    D A + F  M + G + N+  YN LI
Sbjct: 365 ---------------PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            GL  + R+E++ +LL  ME  G +PT +T  +      +  +   A+    KM+ +G  
Sbjct: 410 CGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIV 469

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +      +  L + G+  EA      + + G  PD V Y+  +     + +VD A+ L
Sbjct: 470 PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNL 529

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             ++  +GC PDV+  N +I  L KA RV EA  +F+ M    L P+V TYN L++G  K
Sbjct: 530 LSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGK 589

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G + +A+     M+ K+  SP+ I++ TL+D  C     + A+ ++++M    C P+ +
Sbjct: 590 EGRVQKAIELFESMIXKKC-SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           T+  +I GL K ++   A   F  +K K M PD      L+   +
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLV 692



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 172/646 (26%), Positives = 280/646 (43%), Gaps = 57/646 (8%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L  +G + EA  +F+ ++  GL  P++ +YN +++   K   VD     L EM   G   
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLA-PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     +G+ D+A  +F+ + D       V ++ LL    K G V KA EL 
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M       N  +F  L+  F K   V+ AL++F KMT      D   Y+ +I GL K 
Sbjct: 601  ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEI------------ 263
             ++  A   + ++K S + PD   +  L+     C   G+   + ++             
Sbjct: 661  NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 264  WEDRDVNTMT-------------LLCNSI----------MRILVSNGSIDQAYNLLQAMI 300
            WED    T+              L+ N I          +R+L  +     AY +     
Sbjct: 720  WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFT 779

Query: 301  KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            K               K  +SP  +S++ +I  LL+    + A  LF++M  +GC  + F
Sbjct: 780  K---------------KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             +N L+     S ++ E +EL +EM     KP   T N +   L +  ++  AL+    +
Sbjct: 825  TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                  P  +    LI  L K G+  EA R   +M   G  P+   ++  I G   I   
Sbjct: 885  VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944

Query: 481  DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            + A +LF+ +   G  PD+ +Y I++  LC A RV EA   FNE+ + GL P    YN +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 541  INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            ING  KS  +++A L L   +      PD+ TY +L+  L +AG  + A  ++ E++  G
Sbjct: 1005 INGLGKSQRMEEA-LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 601  CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
              P+  T+ ALI G    + P  A   ++ M   G  P++  +  L
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 243/556 (43%), Gaps = 53/556 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G   EA  ++ ++  EGL  P+  +Y+ L+ AL K    ++V + LKEM+D 
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGL-KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   + YT T  ++V   +G+ D+A  +F  + D G   D   +++L+ A    G+++ A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  +M     + ++  +  L+  F     +D   + + +M   G+  D   + +++  
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK +  + A   +  M+  GI P+    +                            TL
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYN----------------------------TL 408

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           +C      L+  G I+ A  LL  M        VGV+          P   ++   I+  
Sbjct: 409 ICG-----LLRAGRIEDALKLLDTM------ESVGVQ----------PTAYTYITFIDYF 447

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+   A+  F +M   G + N+   N  +  L    RL E+  +   + E+G  P  
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N M +C  +   V  A+NL+ +M   G EP V     LI  L K G+  EA++    
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M      P +V Y+  + GL    RV  A+ELF  +    C P+ +++N ++   CK   
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDE 627

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V  A  +F++M      P V TYN +I G  K   ++ A     ++  K+S  PD +T  
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL--KKSMHPDHVTIC 685

Query: 575 TLIDGLCIAGRPDDAI 590
           TL+ GL   G+  DAI
Sbjct: 686 TLLPGLVKCGQIGDAI 701



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 238/538 (44%), Gaps = 22/538 (4%)

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +V+    + E M    IR +  T+  +      +  + +   + +KM K+GF  +A  Y+
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD--EGELTLLVKEIWEDR 267
            +I  L ++     AL++Y  M   G+ P  +  S L+ +     + E+ +++ +  ED 
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------IKGEPIADVGV---- 310
            +          +R+L   G ID+AY + + M             +  + + + G     
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 311 -EMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
            E+ +  K     P+   +  +++     G LD     + +M   G M +V  +  L+D 
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC +   +E++     M + G  P   T N++   L R   +  AL L+  M   G +P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                  I    K G+  +A      M  +G +P+IV  +A++  L ++ R+  A  +F 
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +  +G  PD V YN+++    K  +V EA +L +EMI  G  P V   N LI+   K+G
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            +D+A     RM + +  SP V+TY TL+ GL   GR   AI L+  M  K C+PN I+F
Sbjct: 557 RVDEAWQMFDRMKDMKL-SPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L+   CK D    AL  F  M     KPD+  +  +I   + E     AF    ++
Sbjct: 616 NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 251/561 (44%), Gaps = 36/561 (6%)

Query: 28   MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            +SP  + +  L+  LG  G V++A  LF+ +  +  C PN  S+N LL+  CK+  V+L 
Sbjct: 573  LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK-CSPNTISFNTLLDCFCKNDEVELA 631

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
                 +M       D  T   ++       + + A   F+++      D      LL   
Sbjct: 632  LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGL 691

Query: 146  SKWGEVDKACELI-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G++  A  +  + M     R+N   +  L+ G + ++ +DKA+   +++  +G   +
Sbjct: 692  VKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRE 751

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGEL--TLLVK 261
             +    ++  LCK+K+   A Q++ +  K  GI+P     + LI      GEL      +
Sbjct: 752  DSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI------GELLEVHYTE 805

Query: 262  EIWE-DRDVNTM-----TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
            + W+  +D+  +         N ++ +   +G I + + L + MI               
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------------ 853

Query: 316  FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                  P+  +++I+I++L K   LD AL  F ++           Y  LIDGL    RL
Sbjct: 854  ----CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 376  EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            EE+  L  EM + G KP     N +     +  D   A  L ++M  +G  P +K  T+L
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 436  IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
            +  LC  G+  EA  +  ++   G  PD + Y+  I GL   +R++ AL L+ ++   G 
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 496  CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             PD+  YN ++  L  A  V +A+ ++ E+   GL P V TYN LI G+  S N + A  
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 556  CLSRMLEKESGSPDVITYTTL 576
                M+  +  +P++ TY  L
Sbjct: 1090 VYKNMM-VDGCNPNIGTYAQL 1109



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 177/379 (46%), Gaps = 3/379 (0%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S D+   +L++M   +PI  +     +    TV   T + + ++  L    K++   ++F
Sbjct: 88  SEDEVLGVLKSMT--DPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVF 145

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M +    +++  Y  +   L     L +   +L +M ++GF    ++ N +   L + 
Sbjct: 146 EFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQS 205

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                AL + R+M  +G +P +K  + L+  L K   +      L +M   G  P++  +
Sbjct: 206 GFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTF 265

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I  L    ++D A E+FR +   GC PD+V Y ++I  LC A ++  A++LF +M  
Sbjct: 266 TICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKA 325

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  P    Y  L++ +   G++D      S+M E +   PDV+T+T L+D LC A   D
Sbjct: 326 NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM-EADGYMPDVVTFTILVDVLCKARDFD 384

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A   ++ M ++G  PN  T+  LI GL +  R   AL     M+  G++P  + ++  I
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFI 444

Query: 648 SAFLSELNPPLAFEVLKEM 666
             F        A E  ++M
Sbjct: 445 DYFGKSGETGKAVETFEKM 463


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 225/447 (50%), Gaps = 23/447 (5%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWED 266
           I+G L K K     + L  +M+  GI PD   LS LI      G++    ++L K +   
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              NT+ L  N++M+ L   G + ++ +        + +   G +M          +  S
Sbjct: 76  YQPNTIIL--NTLMKGLCLKGEVKKSLHF------HDKVVAQGFQM----------DQVS 117

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + I++N L K G+   A+ L R +       +V +Y+ +IDGLC    ++E+Y+L  EM 
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMN 177

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P   T  ++    C    ++ A  L+ +M ++   P +     LI  LCK GK  
Sbjct: 178 ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVK 237

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           E+   L  M ++G  PD+V YS  + G   +  V  A ++F  +   G  PDV +YNIII
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +GLCK +RV EA +L  EM+ K +IP   TY+ LI+G CK G I   +L L++ +     
Sbjct: 298 NGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI-TTILDLTKEMHHRGQ 356

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             +++TY +L+DGLC     D AI L+ +M+E+G  PN+ T+ ALI GLCK  R +    
Sbjct: 357 PANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQA 416

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
            F+ +  KG   D++ +  +IS    E
Sbjct: 417 LFQHLLVKGYCIDVWTYTVMISGLCKE 443



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 26/494 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +  +L +L K      V    K+M+  G   D  TL+ L+  +C+ GQ   + S
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +I+  G+  +  + + L+      GEV K+    +++     ++++ ++ +L++G  
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K      A++L   +       D  MY  II GLCK+K ++ A  LYSEM   GI PD  
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 242 ILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + LI      G+L     LL + I ++ + N  T   N+++  L   G + ++ NLL 
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY--NTLIDTLCKEGKVKESKNLLA 244

Query: 298 AMIKGEPIADVGVE-------------------MLMIFKGTVSPNTSSFDIIINTLLKDG 338
            M K     DV +                     L++ +  V+P+  S++IIIN L K  
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           ++D A++L REM     + +   Y++LIDGLC   R+    +L +EM   G      T N
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+   LC+ Q++  A+ L  KM+ +G +P     T LI  LCK G+  +       ++ +
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK 424

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G+  D+  Y+  I GL      D AL +   +  +GC P+ V + III  L +     +A
Sbjct: 425 GYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKA 484

Query: 519 EDLFNEMITKGLIP 532
           E L +EMI KGL+P
Sbjct: 485 EKLLHEMIAKGLLP 498



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 34/379 (8%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P    F  I+ +L+K       +SL ++M   G + ++   + LI+  C+  ++  S+ +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L ++ + G++P    LN++ + LC + +V  +L+   K+  QG +       +L+  LCK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+   A + L  +      PD+V YS  I GL   K VD A +L+ ++ A G  PDV+ 
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  +I G C A ++ EA  L NEMI K + P++ TYN LI+  CK G + ++   L+ M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 562 EK---------------------------------ESG-SPDVITYTTLIDGLCIAGRPD 587
           +K                                 ++G +PDV +Y  +I+GLC   R D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A+ L  EM  K   P+ +T+ +LI GLCK  R    L   + M  +G   ++  + +L+
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 648 SAFLSELNPPLAFEVLKEM 666
                  N   A  +  +M
Sbjct: 368 DGLCKNQNLDKAIALFMKM 386



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 173/370 (46%), Gaps = 23/370 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   Y+ +++ LCK   VD       EM   G   D  T T L+  +C +GQ  +A  +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207

Query: 124 FNE-IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            NE I+ +   + + ++ L+    K G+V ++  L+  M    ++ +   + +L+ G+  
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V KA Q+F  M ++G   D   Y++II GLCK K+++ A+ L  EM    + PD   
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327

Query: 243 LSKLITSCSDEGELTL---LVKEIWE-DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            S LI      G +T    L KE+    +  N +T   NS++  L  N ++D+A  L   
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY--NSLLDGLCKNQNLDKAIALFMK 385

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M       + G++          PN  ++  +I+ L K G+L    +LF+ +   G   +
Sbjct: 386 M------KERGIQ----------PNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCID 429

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V+ Y  +I GLC     +E+  +  +ME++G  P   T   + R L  + +   A  L+ 
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLH 489

Query: 419 KMRVQGHEPW 428
           +M  +G  P+
Sbjct: 490 EMIAKGLLPF 499


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 275/610 (45%), Gaps = 34/610 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            E+A  +FD++ R G    + Y  NC L  + +      V  R   M   G       +T
Sbjct: 35  AEDARHVFDELLRRGRGA-SIYGLNCALADVARHSPAAAVS-RYNRMARAGAD----EVT 88

Query: 106 PLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
           P L  Y       C +G+ D   +    +I  G+ VD   F+ LL           A ++
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 158 I-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGG 214
           +  RM       N  ++ +L+ G   ++R  +AL+L   M   G     D   Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K   L+ A   Y EM   GI P+    S +I +         L K    D+ +  +T 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA---------LCKAQAMDKAMEVLTS 259

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M    +  SI   Y        G+P   +G    M   G V P+  +++ +++ 
Sbjct: 260 MVKNGVMPNCRTYNSIVHGY-----CSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDY 313

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+  + +     ++  V  A+ +  KMR QG  P       +I  LCK G+  +A R+  
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ E   P  + Y++ I  L    + D A EL  ++   G C D + +N II   CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TY+ LI+G+C +G +D+A   L+ M+      PD +TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTY 552

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 613 SGTQLELSTY 622



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 266/564 (47%), Gaps = 46/564 (8%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+ L+ M D G     D  + T ++  +   G  D
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA   ++E++D G +   V +S ++ A  K   +DKA E++  M    +  N +T+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           P+      L+   + +G L        L+V+            L+C          G +D
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC-----AYAKQGKVD 391

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA  +   M                 +  ++P+T ++  +I  L K G+++ A+  F +M
Sbjct: 392 QAMLVFSKM----------------RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                     +YN+LI  LC  ++ +++ EL+ EM + G        NS+    C+   V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + +  L   M   G +P +   + LI   C  GK  EA + L  MV  G  PD V Y+  
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I R++ AL LFR++ + G  PD++ YNII+ GL + +R A A++L+  +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 531 IPSVATYNLLINGWCKSGNIDQAM-----LCLSRM-LEKESGSPDVITYTTLIDGLCIAG 584
              ++TYN++++G CK+   D+A+     LCL+ + LE         T+  +I  L   G
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR-------TFNIMIGALLKVG 668

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
           R D+A  L+  +   G  P+  T+
Sbjct: 669 RNDEAKDLFAALSANGLVPDVRTY 692



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 213/488 (43%), Gaps = 30/488 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI       R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 231 MKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRI 282
           M   G  P+   + IL K +   +   E   L++ + +D      DV + T + N   + 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK- 211

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D+AY     M+      D G+           PN  ++  II  L K   +D 
Sbjct: 212 ---EGDLDKAYGTYHEML------DRGI----------LPNVVTYSSIIAALCKAQAMDK 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+  
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  +   M  +G +P +     L++     G  +E    L  MV+ G  P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +S  I       +VD A+ +F  +   G  PD V Y  +I  LCK+ RV +A   F
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI + L P    YN LI+  C     D+A   +  ML++     D I + ++ID  C 
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR  ++  L++ M   G  P+ IT+  LI G C   +   A      M   GMKPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 643 FVALISAF 650
           +  LI+ +
Sbjct: 552 YNTLINGY 559



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C S         LK+M   G   D  T   L+   C +G+  +A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  N   F +LI  + 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   D   Y  +IG LCK+ ++E A++ + +M    ++P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 446 VYNSLIHS--------LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          P+  ++  +I+     GK+D A  L   M 
Sbjct: 498 SEKLFDLMVR------IGVK----------PDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R+E++  L REME SG  P   T N + + L + +   
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   L  + EK 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P++  Y   IG      R+DL      ++  
Sbjct: 61  LADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
            G   D +A+  ++ GLC  +R ++A D+    +T+ G IP+V +YN+L+ G C   N  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDE-NRS 178

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           Q  L L +M+  + G   PDV++YTT+I+G    G  D A   ++EM ++G  PN +T+ 
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 275/610 (45%), Gaps = 34/610 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            E+A  +FD++ R G    + Y  NC L  + +      V  R   M   G       +T
Sbjct: 35  AEDARHVFDELLRRGRGA-SIYGLNCALADVARHSPAAAVS-RYNRMARAGAD----EVT 88

Query: 106 PLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
           P L  Y       C +G+ D   +    +I  G+ VD   F+ LL           A ++
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 158 I-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGG 214
           +  RM       N  ++ +L+ G   ++R  +AL+L   M   G     D   Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K   L+ A   Y EM   GI P+    S +I +         L K    D+ +  +T 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA---------LCKAQAMDKAMEVLTS 259

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M    +  SI   Y        G+P   +G    M   G V P+  +++ +++ 
Sbjct: 260 MVKNGVMPNCRTYNSIVHGY-----CSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDY 313

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+  + +     ++  V  A+ +  KMR QG  P       +I  LCK G+  +A R+  
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ E   P  + Y++ I  L    + D A EL  ++   G C D + +N II   CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TY+ LI+G+C +G +D+A   L+ M+      PD +TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTY 552

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 613 SGTQLELSTY 622



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 265/563 (47%), Gaps = 44/563 (7%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+ L+ M D G     D  + T ++  +   G  D
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA   ++E++D G +   V +S ++ A  K   +DKA E++  M    +  N +T+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           P+      L+   + +G L        L+V+            L+C          G +D
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC-----AYAKQGKVD 391

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA  +   M                 +  ++P+T ++  +I  L K G+++ A+  F +M
Sbjct: 392 QAMLVFSKM----------------RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                     +YN+LI  LC  ++ +++ EL+ EM + G        NS+    C+   V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + +  L   M   G +P +   + LI   C  GK  EA + L  MV  G  PD V Y+  
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I R++ AL LFR++ + G  PD++ YNII+ GL + +R A A++L+  +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 531 IPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              ++TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGR 669

Query: 586 PDDAIMLWNEMEEKGCAPNRITF 608
            D+A  L+  +   G  P+  T+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTY 692



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 213/488 (43%), Gaps = 30/488 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI       R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 231 MKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRI 282
           M   G  P+   + IL K +   +   E   L++ + +D      DV + T + N   + 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK- 211

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D+AY     M+      D G+           PN  ++  II  L K   +D 
Sbjct: 212 ---EGDLDKAYGTYHEML------DRGI----------LPNVVTYSSIIAALCKAQAMDK 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+  
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  +   M  +G +P +     L++     G  +E    L  MV+ G  P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +S  I       +VD A+ +F  +   G  PD V Y  +I  LCK+ RV +A   F
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI + L P    YN LI+  C     D+A   +  ML++     D I + ++ID  C 
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR  ++  L++ M   G  P+ IT+  LI G C   +   A      M   GMKPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 643 FVALISAF 650
           +  LI+ +
Sbjct: 552 YNTLINGY 559



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C S         LK+M   G   D  T   L+   C +G+  +A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  N   F +LI  + 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   D   Y  +IG LCK+ ++E A++ + +M    ++P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 446 VYNSLIHS--------LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          P+  ++  +I+     GK+D A  L   M 
Sbjct: 498 SEKLFDLMVR------IGVK----------PDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R+E++  L REME SG  P   T N + + L + +   
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   L  + EK 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P++  Y   IG      R+DL      ++  
Sbjct: 61  LADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
            G   D +A+  ++ GLC  +R ++A D+    +T+ G IP+V +YN+L+ G C   N  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDE-NRS 178

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           Q  L L +M+  + G   PDV++YTT+I+G    G  D A   ++EM ++G  PN +T+ 
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 236/492 (47%), Gaps = 50/492 (10%)

Query: 186 VDKALQLFDKMTK-SGFASDAAMYDVIIGGL----------CKNKQLEMALQ-------- 226
            ++AL+LF  +++ +  A +  +Y  II  L          C  + L   LQ        
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRIC 109

Query: 227 -----LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE---IWEDRDVNTMTLLCNS 278
                + S ++ S  TP+  +   LI + S+ G    LV+E   ++   DV      CN 
Sbjct: 110 CSVFNVLSRLESSKFTPN--VFGVLIIAFSEMG----LVEEALWVYYKMDVLPAMQACNM 163

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  LV  G  D  + +   M+                +G  SPN  ++  +I+   + G
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVA---------------RGA-SPNVVTYGTLIDGCCRQG 207

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
               A  LF EM +      V +Y  LI GLC  +R+ E+  + R M  SG  P  +T N
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +M    C+   V  AL L ++M   G  P V    +LI  LCK  + + A +FL DM   
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G +P+I  Y+  I G      +  AL L  +I  H   PDV  Y+I+I GLC   R+ EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L  EM  KG +P+  TYN LI+G+CK GN+++A+   S+M EK    P++IT++TLID
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLID 446

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C AG+ + A+ L+ EM  KG  P+ + + ALI G  K    + A    + M+E G+ P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 639 DMFVFVALISAF 650
           ++F    LI   
Sbjct: 507 NVFTLSCLIDGL 518



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 258/567 (45%), Gaps = 49/567 (8%)

Query: 107 LLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD-- 162
           L+Q   NS +     SVFN +  ++      +VF +L++AFS+ G V++A  +  +MD  
Sbjct: 96  LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL 155

Query: 163 ----DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
                CN+ L+         G VKK R D   +++  M   G + +   Y  +I G C+ 
Sbjct: 156 PAMQACNMVLD---------GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-- 276
                A +L+ EM    I P   I + LI     E  ++         R+   +  L   
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N++M        + +A  L Q M+        G  +L        PN  +F I+I+ L K
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEML--------GDGLL--------PNVVTFGILIDGLCK 310

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             ++  A     +M   G + N+F+YN LIDG C +  L E+  L  E+E+    P  FT
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            + + + LC    +  A  L+++M+ +G  P  V +NT LI   CK G   +A    + M
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT-LIDGYCKEGNMEKAIEVCSQM 429

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            ++G  P+I+ +S  I G     +++ A+ L+ ++   G  PDVVAY  +I G  K    
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEKESG-------- 566
            EA  L  EM   GL P+V T + LI+G CK G I  A+ L L++     +G        
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549

Query: 567 ---SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              SP+ + YT LI GLC  GR   A   +++M   G  P+  T + +I G  +    R 
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++    + + G+ P+  V+  L   +
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGY 636



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 175/351 (49%), Gaps = 1/351 (0%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           +K  V P   + +++++ L+K G+ D    ++ +M   G   NV  Y  LIDG C     
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +++ L  EM E    PT      + R LC    +  A ++ R MR  G  P +     +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   CK     +A     +M+ +G LP++V +   I GL     +  A +   D+ + G 
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++  YN +I G CKA  ++EA  L +E+    ++P V TY++LI G C    +++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M +K+   P+ +TY TLIDG C  G  + AI + ++M EKG  PN ITF  LI G 
Sbjct: 390 LLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  +  AA+  +  M  KG+ PD+  + ALI     + N   AF + KEM
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 239/579 (41%), Gaps = 106/579 (18%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P   G LI     +GLVEEA  ++ ++      +P   + N +L+ L K    D +   
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMD----VLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
             +M   G   +  T   L+   C  G F KA  +F+E+I+     + +F  +++     
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-----KKIFPTVVI----- 230

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                                   + +LI G   +SR+ +A  +F  M  SG   +   Y
Sbjct: 231 ------------------------YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + ++ G CK   ++ AL+LY EM G G+ P+      LI       E+    K +    D
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI---D 323

Query: 269 VNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           + +  ++ N    I V N  ID   +A NL +A+     I           K  + P+  
Sbjct: 324 MASFGVVPN----IFVYNCLIDGYCKAGNLSEALSLHSEIE----------KHEILPDVF 369

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++ I+I  L    +++ A  L +EM + G + N   YN LIDG C    +E++ E+  +M
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G +P   T +++    C+   +  A+ L  +M ++G  P V   T LI    K G  
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-------------RDICA 492
            EAFR   +M + G  P++   S  I GL    R+  A++LF              ++  
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------------------- 525
             C P+ V Y  +I GLC   R+ +A   F++M                           
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 526 --------ITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
                   +  G+IP+ + Y +L  G+ +SG +  A+ C
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRC 648


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 266/556 (47%), Gaps = 24/556 (4%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + ++A+ +F  +I    +   + FS L  A ++  E D      + MD   I  N  T  
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I+ F +K ++  A  +  +  K GF  +   +  +I G C   ++  A+ L   M   
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 235 GITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
              P+   ++ LI     +G +T    L+ + +    + N +T     ++  +  +G+  
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY--GPVLNRMCKSGNTA 226

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A +L + M                 + ++  +   + I+I++L KDG LD ALSLF EM
Sbjct: 227 LALDLFRKM----------------EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +V  Y+++I GLCN  R ++  ++LREM      P   T +++     +   +
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + A  L  +M  +G  P     + LI   CK  +  EA + L  MV +G  P+IV YS  
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I      KRVD  + LF +I + G   D V YN ++ G C++ ++  A++LF EM+++G+
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            PSV TY +L++G C +G + +A+    +M +K      +  Y  +I G+C A + DDA 
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEIFEKM-QKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L+  +  KG  P+ +T+  +I GLCK      A + FR MKE G  P    +  LI A 
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAH 569

Query: 651 LSELNPPLAFEVLKEM 666
           L       + E+++EM
Sbjct: 570 LGGSGVISSVELIEEM 585



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/575 (28%), Positives = 267/575 (46%), Gaps = 25/575 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA  LF+ +  +   +P+   ++ L  A+ +    DLV    KEM   G  ++ YT+ 
Sbjct: 50  VNEAIDLFESMI-QSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            ++  +C   +   A SV    +  G+    + FS L+  F   G V +A  L++RM + 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
             R N  T   LI+G   K RV +AL L D+M K G  ++   Y  ++  +CK+    +A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           L L+ +M+   I       S +I S   +G L   L +    E + +    +  +SI+  
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L ++G  D    +L+ MI    I                PN  +F  +I+  +K+GKL  
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNII----------------PNVVTFSALIDVFVKEGKLLE 332

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L+ EM   G   +   Y++LIDG C  NRL E+ ++L  M   G +P   T + +  
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392

Query: 403 CLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             C+ + V   + L  ++  +G     V +NT L++  C+ GK   A     +MV  G  
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNT-LVQGFCQSGKLNVAKELFQEMVSRGVP 451

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P +V Y   + GL D   +  ALE+F  +        +  YNIII G+C A +V +A  L
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL 511

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGL 580
           F  +  KG+ P V TYN++I G CK G++ +A +   +M  KE G +P   TY  LI   
Sbjct: 512 FCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM--KEDGCAPSDCTYNILIRAH 569

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
                   ++ L  EM+ +G A +  T   ++  L
Sbjct: 570 LGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 221/496 (44%), Gaps = 22/496 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +++ L+   C    V      +  M +  +  +  T+  L+   C  G+  +AL +
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + ++ +G   +E  +  +L    K G    A +L  +M++ +I+ +   + ++I    K
Sbjct: 197 IDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK 256

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              +D AL LF++M   G  +D   Y  IIGGLC + + +   ++  EM G  I P+   
Sbjct: 257 DGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVT 316

Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI     EG+L L  KE++ +   R +   T+  +S++        + +A  +L   
Sbjct: 317 FSALIDVFVKEGKL-LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD-- 373

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        LM+ KG   PN  ++ I+IN+  K  ++D  + LF E++  G + + 
Sbjct: 374 -------------LMVSKGC-EPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADT 419

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN L+ G C S +L  + EL +EM   G  P+  T   +   LC   ++  AL +  K
Sbjct: 420 VTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEK 479

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+       +    ++I  +C   K  +A+     +  +G  PD++ Y+  IGGL     
Sbjct: 480 MQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A  LFR +   GC P    YNI+I        V  + +L  EM  +G     +T  +
Sbjct: 540 LSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKM 599

Query: 540 LINGWCKSGNIDQAML 555
           ++      G +D+  L
Sbjct: 600 VVV-MLSDGRLDKTFL 614



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 7/363 (1%)

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A N  Q + KG       + + ++    +S    S+   +   + D K++ A+ LF  M
Sbjct: 7   KASNFTQIIDKGT------LRISLLHYSCISEAKVSYKERLRNGIVDIKVNEAIDLFESM 60

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q   + ++  ++ L   +      +      +EM+ +G +   +T+N M  C CR++ +
Sbjct: 61  IQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKL 120

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + A ++V +    G EP     + LI   C  G+  EA   +  MV+  + P++V  +  
Sbjct: 121 LFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTL 180

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL    RV  AL L   +  +GC  + + Y  +++ +CK+   A A DLF +M  + +
Sbjct: 181 INGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSI 240

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
             SV  Y+++I+  CK GN+D A+   + M E +    DV+ Y+++I GLC  GR DD  
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGA 299

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +  EM  +   PN +TF ALI    K  +   A   +  M  +G+ PD   + +LI  F
Sbjct: 300 KMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGF 359

Query: 651 LSE 653
             E
Sbjct: 360 CKE 362



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 194/424 (45%), Gaps = 22/424 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA +L D++ + G C  N  +Y  +L  +CKS +  L     ++M++         
Sbjct: 188 GRVTEALVLIDRMVKYG-CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + ++   C  G  D ALS+FNE+   G   D   +S ++      G  D   +++  M 
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             NI  N  TF  LI  FVK+ ++ +A +L+++M   G A D   Y  +I G CK  +L 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A Q+   M   G  P+    S LI S      +   ++   E   + +   T+  N+++
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426

Query: 281 RILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +    +G ++ A  L Q M+ +G P                 P+  ++ I+++ L  +G+
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVP-----------------PSVVTYGILLDGLCDNGE 469

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L  AL +F +M +   +  + +YN +I G+CN++++++++ L   +   G KP   T N 
Sbjct: 470 LQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNV 529

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           M   LC++  +  A  L RKM+  G  P      +LI+        + +   + +M   G
Sbjct: 530 MIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589

Query: 460 FLPD 463
           F  D
Sbjct: 590 FAAD 593


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 255/551 (46%), Gaps = 42/551 (7%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+ Y+YN L+ A             L  M   G      T + ++  +CN G   +A 
Sbjct: 309 CEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F  I + G   +  +++ L+  + K  +V +A  L E M D  I  +  TF +L+ G 
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  +   + +LF   + S    D ++YDV + GLC   QL+ A+Q   +M   G+ P  
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-----------CNSIMRILVSNGSI 289
              + +I + S  G         +ED       ++           C+S++  L   G +
Sbjct: 489 VAFNSVIAAYSRAG---------FEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRL 539

Query: 290 DQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            +A +LL  MI KG P+                 N  +F ++++   K G    A SL+ 
Sbjct: 540 QEARDLLYKMIDKGLPV-----------------NKVAFTVLLDGYFKVGDTAGAHSLWY 582

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G   +   ++  IDGL  +  +EE+YE   EM + GF P +F  NS+   LC   
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  AL L R+MR +G  P +    ++I   CK G+   AF    +M   G  PD V Y+
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             IGG   +  +  A E    + A G  PD+  YNI I G C +Q+++ A  + +E+I  
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G++P+  TYN ++N  C +  +D+AM+  +++L K +  P+V+T   L+   C  G P+ 
Sbjct: 763 GVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLL-KMAFVPNVVTTNVLLSHFCKQGMPEK 820

Query: 589 AIMLWNEMEEK 599
           A ++W +   K
Sbjct: 821 A-LIWGQKLNK 830



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/633 (24%), Positives = 279/633 (44%), Gaps = 55/633 (8%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S  A+  L R L  VG       L   + R+G   P N+++N ++   C+   + + E  
Sbjct: 242 SSSAISILFRLLLRVGDYGSVWKLLRGMIRDG-PRPCNHNFNIMILCFCQKGYLRVAESL 300

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
           L  M  +    D Y    L+  Y   G+   AL   + +I +G     + FS ++ AF  
Sbjct: 301 LFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCN 360

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G V +A ++ E + +  +  N   +  L+ G+ K   V +A  L+++M   G A D A 
Sbjct: 361 EGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGAT 420

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           +++++ G  K  +   + +L+ +   S + PD  +                         
Sbjct: 421 FNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLY------------------------ 456

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSS 326
           DV ++  LC +        G +D+A   L+ M+ KG P                 P+  +
Sbjct: 457 DV-SVAGLCWA--------GQLDEAMQFLEDMLEKGMP-----------------PSVVA 490

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I    + G  D A   ++ M   G + +    ++++ GL    RL+E+ +LL +M 
Sbjct: 491 FNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI 550

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G          +     +  D  GA +L  +M  +G  P     +  I  L K G   
Sbjct: 551 DKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVE 610

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA+   ++M ++GF+P+   Y++ I GL +  ++  AL+L R++   G  PD+   NIII
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIII 670

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G CK  R+  A D F EM   G+ P   TYN LI G+CK  ++  A   L++M      
Sbjct: 671 NGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYA-SGW 729

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD+ TY   I G C + +   A+ + +E+   G  PN +T+  ++  +C     RA ++
Sbjct: 730 DPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVL 789

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
             +++K     P++     L+S F  +  P  A
Sbjct: 790 TAKLLK-MAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 219/508 (43%), Gaps = 64/508 (12%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELT 257
           + SD ++ + ++ G   ++    +L++ S M+  G+ P      IL +L+    D G + 
Sbjct: 204 YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVW 263

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILV----SNGSIDQAYNLLQAMIKGEPIADVGVEML 313
            L++ +  D         CN    I++      G +  A +LL  M K            
Sbjct: 264 KLLRGMIRDGPRP-----CNHNFNIMILCFCQKGYLRVAESLLFVMPKF----------- 307

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P+  +++I+IN     G+   AL     M + GC  ++  ++ +I   CN  
Sbjct: 308 -----CCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEG 362

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            + E+ ++   ++E G  P     N++     + +DV  A  L  +MR +G  P      
Sbjct: 363 NVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFN 422

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+    K+GK  +++    D      +PD   Y  ++ GL    ++D A++   D+   
Sbjct: 423 ILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEK 482

Query: 494 GCCPDVVAYNIIIS-----------------------------------GLCKAQRVAEA 518
           G  P VVA+N +I+                                   GL K  R+ EA
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEA 542

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            DL  +MI KGL  +   + +L++G+ K G+   A   L   +E     PD I ++  ID
Sbjct: 543 RDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAH-SLWYEMEARGICPDAIAFSAFID 601

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL  AG  ++A   ++EM +KG  PN   + +LI GLC C +   AL   R M++KG+ P
Sbjct: 602 GLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLP 661

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D+F    +I+ F  E     AF+   EM
Sbjct: 662 DIFTTNIIINGFCKEGRMKSAFDAFAEM 689


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 282/610 (46%), Gaps = 25/610 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A  L++++ R+G+ +P+  + + L+  LCK           +EM+  G   +  T  
Sbjct: 260 VDDAFSLYEEMVRKGV-LPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYC 318

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+     + + +++LS+  E++  G V D  +++ L+    K G++D+A ++       
Sbjct: 319 MLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSD 378

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N   N  T+ VLI    K   VD A Q+  +M +   + +   +  II GL K   +  A
Sbjct: 379 NHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKA 438

Query: 225 LQLYSEMKGSGITPDFEILSKLITSC----SDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
                EMK  GI P+      +I         E  L +  + + E  +VN    + +S++
Sbjct: 439 TDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNK--FIVDSLV 496

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L  NG I++A  L + M +   + D                  ++  +I+ L K G L
Sbjct: 497 NGLKKNGKIEKAEALFREMNERGVLLD----------------HVNYTTLIDGLFKTGNL 540

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  + +E+T+   + +  +YN  I+ LC   + +E+   L EM+ +G KP   T N+M
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTM 600

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                R      AL L+  M+    +P +   + LI  L + G   +A   L +M   GF
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P  + +   +      +R DL LE+   +   G C D+  YN ++  LC      +A  
Sbjct: 661 SPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV 720

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +  EM  +G+ P   T+N LI G  KSG++D A     +ML     SP+V T+ TL+ GL
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQML-YHGISPNVATFNTLLGGL 779

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             AGR  ++ M+ NEM+++G  P+ +T+  L+TG  K      A+  +  M  KG  P +
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839

Query: 641 FVFVALISAF 650
             + ALIS F
Sbjct: 840 STYNALISDF 849



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 176/663 (26%), Positives = 293/663 (44%), Gaps = 38/663 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +++V+         L  L+  L   G   EA  LF ++++ G   PN+ +Y  L++ L
Sbjct: 266 LYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG-AAPNHVTYCMLIDTL 324

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K+   +     L E+   G   D    T L+   C  G+ D+A  +F     H   D H
Sbjct: 325 AKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR----HALSDNH 380

Query: 137 V-----FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
                 +++L+ A  K G VD A +++  M++ +I  N  TF  +I+G VK+  V KA  
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATD 440

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
              +M + G   +   Y  +I G  K    E AL +Y EM   G+  +  I+  L+    
Sbjct: 441 YMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLK 500

Query: 252 DEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             G++     L +E+ E R V    +   +++  L   G++  A+ + Q + +   + D 
Sbjct: 501 KNGKIEKAEALFREMNE-RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 309 GVEMLMI------------------FKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            V  + I                   + T + P+  +++ +I    ++GK   AL L   
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC--RR 407
           M +     N+  Y+ LI GL  +  +E++  LL EM  SGF PT  T   + +     RR
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            D++  L +   M   G    +     L++ LC +G   +A   L +M   G  PD + +
Sbjct: 680 SDLI--LEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I G      +D A   +  +  HG  P+V  +N ++ GL  A R+ E++ + NEM  
Sbjct: 738 NALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK 797

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +G+ PS  TY++L+ G+ K  N  +A+     M+ K    P V TY  LI      G   
Sbjct: 798 RGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGK-GFLPKVSTYNALISDFSKVGMMS 856

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  L+NEM+ +G  P   T+  L++G  K           + MKEKG  P      ++ 
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSIS 916

Query: 648 SAF 650
            AF
Sbjct: 917 RAF 919



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 172/681 (25%), Positives = 281/681 (41%), Gaps = 101/681 (14%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SYN ++    +   +   E  L EM   G  +D  T+  +L   C  G+ D+A ++ 
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 125 NEIIDHGWV---DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             ++  G +   D   ++ L+  + K G+++ A  + ERM    + ++   +  L+ G  
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   VD A  + D M + G   +   Y + I   C+   ++ A  LY EM   G+ PD  
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 242 ILSKLITSCSDEG---ELTLLVKE---IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            LS L+     +G   E   L +E   I    +  T  +L +++ +    N S+      
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLS----- 335

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               + GE ++  GV M +I           +  +++ L K+GK+D A  +FR       
Sbjct: 336 ----LLGEVVSR-GVVMDLIM----------YTALMDWLCKEGKIDEAKDMFRHALSDNH 380

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N   Y  LID LC +  ++ + ++L EMEE    P   T +S+   L +R  V  A +
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATD 440

Query: 416 LVRKMRVQGHEPW----------------------VKHNTL-------------LIKELC 440
            +R+M+ +G +P                       V H  L             L+  L 
Sbjct: 441 YMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLK 500

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K+GK  +A     +M + G L D V Y+  I GL     +  A ++ +++      PD V
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN+ I+ LC   +  EAE    EM + GL P   TYN +I    + G   +A+  L+ M
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT------------- 607
            ++ S  P++ITY+TLI GL  AG  + A  L NEM   G +P  +T             
Sbjct: 621 -KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 608 ----------------------FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
                                 +  L+  LC     R A+V    M  +G+ PD   F A
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI       +   AF    +M
Sbjct: 740 LILGHFKSGHLDNAFSTYDQM 760



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 241/542 (44%), Gaps = 30/542 (5%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           VD   +++++  FS+ G +     L E M    +  +  T   ++ G  +  RVD+A  L
Sbjct: 101 VDTVSYNVVMSGFSEQGGLAPEALLAE-MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 193 FDKMTKSGFAS--DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            + M + G     D   ++ ++ G CK   +E A  +   MK  G+  D    + L+   
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 251 SDEGELTL------LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
              GE+         +K    + +V T T+      R      ++D A++L + M++   
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCR----RNAVDDAFSLYEEMVR--- 272

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       KG V P+  +   ++  L KDG+   A +LFREM +IG   N   Y  
Sbjct: 273 ------------KG-VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LID L  + R  ES  LL E+   G         ++   LC+   +  A ++ R      
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           H P     T+LI  LCK G    A + L++M ++   P++V +S+ I GL+    V  A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +  R++   G  P+VV Y  +I G  K      A D+++EM+ +G+  +    + L+NG 
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
            K+G I++A   L R + +     D + YTTLIDGL   G    A  +  E+ EK   P+
Sbjct: 500 KKNGKIEKAE-ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            + +   I  LC   + + A      M+  G+KPD   +  +I+A   E     A ++L 
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLN 618

Query: 665 EM 666
            M
Sbjct: 619 GM 620



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 226/515 (43%), Gaps = 61/515 (11%)

Query: 38  RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           +CLG     E A  ++ ++  EG+ V N +  + L+  L K+  ++  E   +EM + G 
Sbjct: 466 KCLGQ----EAALDVYHEMLCEGVEV-NKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACE 156
             D    T L+     +G    A  V  E+ +   + D  V+++ +      G+  +A  
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            +E M    ++ ++ T+  +I    ++ +  KAL+L + M +S    +   Y  +I GL 
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF 640

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMT 273
           +   +E A  L +EM  SG +P      +++ +CS +G  + L+ EI E   +  +    
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACS-QGRRSDLILEIHEWMMNAGLCADI 699

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
            + N+++R+L  NG   +A  +L+ M  G  IA               P+T +F+ +I  
Sbjct: 700 TVYNTLVRVLCYNGMTRKAMVVLEEM-SGRGIA---------------PDTITFNALILG 743

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K G LD A S + +M   G   NV  +N L+ GL ++ R+ ES  +L EM++ G +P+
Sbjct: 744 HFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPS 803

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           + T +                                   +L+    K    +EA R   
Sbjct: 804 NLTYD-----------------------------------ILVTGYGKQSNKVEAVRLYC 828

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +MV +GFLP +  Y+A I     +  +  A ELF ++   G  P    Y+I++SG  K +
Sbjct: 829 EMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLR 888

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
              E      +M  KG  PS  T + +   + K G
Sbjct: 889 NGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG 923


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 238/492 (48%), Gaps = 50/492 (10%)

Query: 186 VDKALQLFDKMTK-SGFASDAAMYDVIIGGL----------CKNKQLEMALQ-------- 226
            ++AL+LF  +++ +  A +  +Y  II  L          C  + L   LQ        
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRIC 109

Query: 227 -----LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE---IWEDRDVNTMTLLCNS 278
                + S ++ S  TP+  +   LI + S+ G    LV+E   ++   DV      CN 
Sbjct: 110 CSVFNVLSRLESSKFTPN--VFGVLIIAFSEMG----LVEEALWVYYKMDVLPAMQACNM 163

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  LV  G  D  +      + G+          M+ +G  SPN  ++  +I+   + G
Sbjct: 164 VLDGLVKKGRFDTMWK-----VYGD----------MVARG-ASPNVVTYGTLIDGCCRQG 207

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
               A  LF EM +      V +Y  LI GLC  +R+ E+  + R M  SG  P  +T N
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +M    C+   V  AL L ++M   G  P V    +LI  LCK  + + A +FL DM   
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G +P+I  Y+  I G      +  AL L  +I  H   PDV  Y+I+I GLC   R+ EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L  EM  KG +P+  TYN LI+G+CK GN+++A+   S+M EK    P++IT++TLID
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLID 446

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C AG+ + A+ L+ EM  KG  P+ + + ALI G  K    + A    + M+E G+ P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 639 DMFVFVALISAF 650
           ++F    LI   
Sbjct: 507 NVFTLSCLIDGL 518



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 175/351 (49%), Gaps = 1/351 (0%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           +K  V P   + +++++ L+K G+ D    ++ +M   G   NV  Y  LIDG C     
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +++ L  EM E    PT      + R LC    +  A ++ R MR  G  P +     +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   CK     +A     +M+ +G LP++V +   I GL     +  A +   D+ + G 
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++  YN +I G CKA  ++EA  L +E+    ++P V TY++LI G C    +++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M +K+   P+ +TY TLIDG C  G  + AI + ++M EKG  PN ITF  LI G 
Sbjct: 390 LLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  +  AA+  +  M  KG+ PD+  + ALI     + N   AF + KEM
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 219/473 (46%), Gaps = 38/473 (8%)

Query: 107 LLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD-- 162
           L+Q   NS +     SVFN +  ++      +VF +L++AFS+ G V++A  +  +MD  
Sbjct: 96  LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVL 155

Query: 163 ----DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
                CN+ L+         G VKK R D   +++  M   G + +   Y  +I G C+ 
Sbjct: 156 PAMQACNMVLD---------GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-- 276
                A +L+ EM    I P   I + LI     E  ++         R+   +  L   
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N++M        + +A  L Q M+        G  +L        PN  +F I+I+ L K
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEML--------GDGLL--------PNVVTFGILIDGLCK 310

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             ++  A     +M   G + N+F+YN LIDG C +  L E+  L  E+E+    P  FT
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            + + + LC    +  A  L+++M+ +G  P  V +NT LI   CK G   +A    + M
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT-LIDGYCKEGNMEKAIEVCSQM 429

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            ++G  P+I+ +S  I G     +++ A+ L+ ++   G  PDVVAY  +I G  K    
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEKESGS 567
            EA  L  EM   GL P+V T + LI+G CK G I  A+ L L++     +GS
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGS 542



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 159/678 (23%), Positives = 270/678 (39%), Gaps = 118/678 (17%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P   G LI     +GLVEEA  ++ ++      +P   + N +L+ L K    D +   
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMD----VLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
             +M   G   +  T   L+   C  G F KA  +F+E+I     ++ +F  +++     
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI-----EKKIFPTVVI----- 230

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                                   + +LI G   +SR+ +A  +F  M  SG   +   Y
Sbjct: 231 ------------------------YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + ++ G CK   ++ AL+LY EM G G+ P+      LI       E+    K +    D
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI---D 323

Query: 269 VNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           + +  ++ N    I V N  ID   +A NL +A+     I           K  + P+  
Sbjct: 324 MASFGVVPN----IFVYNCLIDGYCKAGNLSEALSLHSEIE----------KHEILPDVF 369

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++ I+I  L    +++ A  L +EM + G + N   YN LIDG C    +E++ E+  +M
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G +P   T +++    C+   +  A+ L  +M ++G  P V   T LI    K G  
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF---------------RDI 490
            EAFR   +M + G  P++   S  I GL    R+  A++LF                D 
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549

Query: 491 CAHGCCPDVVAYNIIISGLC----KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             +  C   ++    IS  C    +  ++    +     +   L P  +  N  +  + +
Sbjct: 550 SLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKS--NQTLKRYLQ 607

Query: 547 SGNIDQAMLCLSRMLEKESGSPD--------------------------VITY------- 573
           S N  + +L    +L K   S D                          VI +       
Sbjct: 608 SSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIF 667

Query: 574 --TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
             T+LI      G   DA  +++E+  K    N I++ ++I+      RP  AL  FR M
Sbjct: 668 LQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQM 723

Query: 632 KEKGMKPDMFVFVALISA 649
           +   ++PD+      +SA
Sbjct: 724 QMDDVQPDIVTVTVALSA 741



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 146/640 (22%), Positives = 274/640 (42%), Gaps = 75/640 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +  V++A  L+ ++  +GL +PN  ++  L++ LCK+  +      L +M  +G   + +
Sbjct: 276 IAHVKKALELYQEMLGDGL-LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
               L+  YC +G   +ALS+ +EI  H  + D   +SIL+        +++A  L++ M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                  N  T+  LI G+ K+  ++KA+++  +MT+ G   +   +  +I G CK  ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE-DRDVNTMTLLCN 277
           E A+ LY+EM   G+ PD    + LI     +G   E   L KE+ E     N  TL C 
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC- 513

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++  L  +G I  A  L         +A  G +       T    T+  D  +  +   
Sbjct: 514 -LIDGLCKDGRISDAIKLF--------LAKTGTD-------TTGSKTNELDRSLYQMC-- 555

Query: 338 GKLDLALSLFREMTQ----IGCMQNVFLYNNLIDGLCNSN-RLEESYELLREMEESGFKP 392
               LALSLFR +++    +  +  +F  NN      +++ +  +S + L+   +S    
Sbjct: 556 ---SLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTS 612

Query: 393 THFTLNSMFRCLCRRQ-DVVGALNLVRKMRV-------------------QGHEPWVKHN 432
                   FR L R+    + + +L+  ++                     G EP +   
Sbjct: 613 KVLLF---FRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQ 669

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI      G   +A     ++  +    +++ +++ I   +D +R + AL+LFR +  
Sbjct: 670 TSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQM 725

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               PD+V   + +S       +   E +   +  +GL   +   N LIN + K G I  
Sbjct: 726 DDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGT 785

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT-FMAL 611
           A    S +L      P+ +T+  ++     AG  ++    +  M+E      RI+ F  +
Sbjct: 786 ARR-FSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCM 838

Query: 612 ITGLCKCDRPRAALV--HFRMMKEKGMKPDMFVFVALISA 649
           +  LC     RA L+   +  + +  ++P+  V+  L+ A
Sbjct: 839 VDLLC-----RAGLLTEAYEFILKMPVRPNAVVWRTLLGA 873



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 113/548 (20%), Positives = 235/548 (42%), Gaps = 46/548 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+ L  V  +EEA+ L  ++K++G  +PN  +YN L++  CK  +++       +M + 
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGF-LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T + L+  YC +G+ + A+ ++ E++  G + + V ++ L+    K G   +A
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M +  +  N  T   LI G  K  R+  A++LF  + K+G  +  +  + +   
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRS 550

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L   +   +AL L+  +    I     +     T+   +  L   +K    ++ +     
Sbjct: 551 L--YQMCSLALSLFRGISEPCICV-IRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQ 607

Query: 275 LCNS-----IMRILV-SNGSIDQAYNLLQAM----IKGEPIADVGVEMLMI---FKGTVS 321
             N+       RIL+  N S   +++L+ A+    +K   +    +  L+I   F+  + 
Sbjct: 608 SSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIF 667

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
             TS    +I+     G +  A ++F E+      +N+  + ++I    ++ R  ++ +L
Sbjct: 668 LQTS----LISMYSATGNVADAHNMFDEIPS----KNLISWTSVISAYVDNQRPNKALQL 719

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR----KMRVQGHEPWVKHNTLLIK 437
            R+M+    +P   T+             +GAL++       +R +G +  +  N  LI 
Sbjct: 720 FRQMQMDDVQPDIVTVTVALSACAD----LGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 775

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCC 496
              K G+   A RF         LP+ V +   +        V+   + FR +   +   
Sbjct: 776 MYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLR 829

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P +  +  ++  LC+A  + EA +   +M  +   P+   +  L+      G  D+ ML 
Sbjct: 830 PRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGACSLQGMWDKKMLV 886

Query: 557 LSRMLEKE 564
            +++ ++ 
Sbjct: 887 RNQIKQRR 894


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/602 (26%), Positives = 285/602 (47%), Gaps = 59/602 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCK---SCSVDLVEMRLKEMQDYGWGYDKYT 103
             A  +F+++KR  L  PN  + N L+ AL +     SV L +    ++   G   +  T
Sbjct: 156 HHAAQIFNRMKRLHL-KPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNT 214

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+   C   +  +A+ +  ++ D     ++V ++ +L    K G++++A +L+  M 
Sbjct: 215 FNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 274

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  N  TF +L+ G+ K   + +A Q+ D M ++    D   Y+++IGGLCK+ +++
Sbjct: 275 NNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKID 334

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A +L  EM+   + PD    + LI  C D                       C+S ++ 
Sbjct: 335 EAFRLKDEMENLKLLPDVVTYNTLINGCFD-----------------------CSSSLK- 370

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLD 341
                                     G E++   +G  V PN  ++++++   +K+GK+D
Sbjct: 371 --------------------------GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMD 404

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A +  R+M + G   +   +N LI+G C + RL E++ ++ EM   G K    TLN++ 
Sbjct: 405 NAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 464

Query: 402 RCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             LC  + +  A  L+     +G+    V + TL++    K GK++EA +   +M ++  
Sbjct: 465 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF-KDGKSVEAMKLWDEMKEKEI 523

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P I+ Y+  IGGL    + D +++   ++   G  PD   YN II G C+  +V +A  
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQ 583

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
             N+M+ K   P + T N+L+ G C  G +D+A+   +  + K   + D +TY T+I GL
Sbjct: 584 FHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISK-GKAIDAVTYNTIISGL 642

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C   R ++A  L  EMEEK   P+  T+ A+++ L    R + A      + E+G   D 
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702

Query: 641 FV 642
            +
Sbjct: 703 TI 704



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 262/587 (44%), Gaps = 88/587 (14%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+N SYN +L+ LCK   ++     L +M++ G   ++ T   L+  YC  G   +A 
Sbjct: 243 CFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAA 302

Query: 122 SVF-----NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            V      N ++   W     +++L+    K G++D+A  L + M++  +  +  T+  L
Sbjct: 303 QVIDLMAQNNVLPDVWT----YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL 358

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+G    S   K  +L DKM   G   +A  Y+V++    K  +++ A     +M+ SG 
Sbjct: 359 INGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTLLCNSIMRILVSNGSIDQA 292
           +PD    + LI      G L+   + + E       +N++TL  N+I+  L     +D A
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL--NTILHTLCGERKLDDA 476

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           Y LL +  K     D                  S+  +I    KDGK   A+ L+ EM +
Sbjct: 477 YKLLSSASKRGYFVD----------------EVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
              + ++  YN +I GLC+S + ++S + L E+ ESG  P   T N++    CR      
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCR------ 574

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
                                         G+  +AF+F   MV++ F PD+   +  + 
Sbjct: 575 -----------------------------EGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL     +D AL+LF    + G   D V YN IISGLCK  R  EA DL  EM  K L P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEK----------------------ESGSPDV 570
              TYN +++    +G + +A   +SR++E+                      +   P+ 
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNS 725

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           +T++  I+ LC  G+  DA+ +  E  +KG   ++ T+++L+ GL K
Sbjct: 726 VTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 235/520 (45%), Gaps = 85/520 (16%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +++N  TF +LI+G   ++++ +A+ L  KM       D   Y+ I+  LCK  +L  A 
Sbjct: 208 VKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEAR 267

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  +MK +G+ P+                              NT  +L +   ++   
Sbjct: 268 DLLLDMKNNGLLPN-----------------------------RNTFNILVSGYCKL--- 295

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G + +A  ++  M +                  V P+  +++++I  L KDGK+D A  
Sbjct: 296 -GWLKEAAQVIDLMAQN----------------NVLPDVWTYNMLIGGLCKDGKIDEAFR 338

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM  +  + +V  YN LI+G  + +   + +EL+ +ME  G KP   T N + +   
Sbjct: 339 LKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYV 398

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           +   +  A N +RKM   G  P  V  NTL I   CK G+  EAFR + +M ++G   + 
Sbjct: 399 KEGKMDNAGNELRKMEESGFSPDCVTFNTL-INGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V  +  +  L   +++D A +L       G   D V+Y  +I G  K  +  EA  L++E
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE---------------------- 562
           M  K +IPS+ TYN +I G C SG  DQ++  L+ +LE                      
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 563 ------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
                       K+S  PD+ T   L+ GLC  G  D A+ L+N    KG A + +T+  
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +I+GLCK DR   A      M+EK + PD + + A++SA 
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 39/199 (19%)

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN----------------------- 542
           I       R   A  +FN M    L P++ T N LIN                       
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 543 ---------------GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
                          G C    + +A+  + +M +  S  PD ++Y T++D LC  G+ +
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKM-KDFSCFPDNVSYNTILDVLCKKGKLN 264

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  L  +M+  G  PNR TF  L++G CK    + A     +M +  + PD++ +  LI
Sbjct: 265 EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLI 324

Query: 648 SAFLSELNPPLAFEVLKEM 666
                +     AF +  EM
Sbjct: 325 GGLCKDGKIDEAFRLKDEM 343


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 224/443 (50%), Gaps = 21/443 (4%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     +DKA ++   + K G   D   Y+ +I G CK  ++E A  +   MK  G
Sbjct: 16  LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74

Query: 236 ITPDFEILSKLITSCSDEGELTLLVK---EIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            +PD    + +I +   +G++ L +K   E+ +D +     +    ++   +  G ID+A
Sbjct: 75  FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL  M+        G+E          P+T ++++I   L K+GK+D A    R +  
Sbjct: 135 LKLLDEMLS------RGLE----------PDTFTYNVITRGLCKEGKVDRAFEFVRTLNS 178

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC  +V  YN L+  L N  + +E  + + E+   G +P   T + +   LCR   +  
Sbjct: 179 RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEE 238

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           ++NLV+ M+ +G  P       LI   C+ GK   A  FL  M+ +GFLPDIV Y+  + 
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            L      D A+E+F  +   GC P+V +YN ++S L  +     A  + ++M++KG+ P
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP 358

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V TYN LI+  C+ G +D+A+  L+ ML      P++++Y T++ GLC A R DDAI +
Sbjct: 359 DVITYNSLISCLCRDGMVDEAIGLLADMLSGRF-QPNIVSYKTVLLGLCKAHRIDDAIEV 417

Query: 593 WNEMEEKGCAPNRITFMALITGL 615
              M E GC PN  T+  LI G+
Sbjct: 418 LAAMIENGCQPNETTYTLLIEGI 440



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 217/470 (46%), Gaps = 63/470 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++YN ++   CK+  ++  +  L  M+  G+  D  T   ++  +C  G+ D AL V
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           F E+                                 + D N +    T+ +LI  ++ +
Sbjct: 102 FEEL---------------------------------LKDNNCKPTLITYTILIEAYILE 128

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
             +D+AL+L D+M   G   D   Y+VI  GLCK  +++ A +    +   G  PD   +
Sbjct: 129 GGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITY 188

Query: 241 EILSKLITSCS--DEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            IL + + +    DEGE  +   EI+    + +V T ++L +S+ R    +G I+++ NL
Sbjct: 189 NILLRALLNQGKWDEGEKWM--SEIFSRGCEPNVVTYSILISSLCR----DGKIEESVNL 242

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M +               KG ++P+   +D +I    ++GKLD+A+     M   G 
Sbjct: 243 VKVMKE---------------KG-LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGF 286

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + ++  YN ++  LC +   + + E+  +++E G  P   + N+M   L    D   AL 
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALG 346

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           ++ +M  +G +P V     LI  LC+ G   EA   L DM+   F P+IV Y   + GL 
Sbjct: 347 MISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLC 406

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
              R+D A+E+   +  +GC P+   Y ++I G+  +    +A +L N +
Sbjct: 407 KAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 207/453 (45%), Gaps = 19/453 (4%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
           T L++ + NS   DKA  V   +  HG  D   ++ ++  F K   ++ A  +++RM   
Sbjct: 14  TKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRK 73

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM-YDVIIGGLCKNKQLEM 223
               +  T  ++I  F  K ++D AL++F+++ K        + Y ++I        ++ 
Sbjct: 74  GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDE 133

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMR 281
           AL+L  EM   G+ PD    + +      EG++    +       R      +  N ++R
Sbjct: 134 ALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLR 193

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L++ G  D+    +                  IF     PN  ++ I+I++L +DGK++
Sbjct: 194 ALLNQGKWDEGEKWMSE----------------IFSRGCEPNVVTYSILISSLCRDGKIE 237

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            +++L + M + G   + + Y+ LI   C   +L+ + E L  M   GF P     N++ 
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+  +   A+ +  K+   G  P V     ++  L   G    A   ++ M+ +G  
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGID 357

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD++ Y++ I  L     VD A+ L  D+ +    P++V+Y  ++ GLCKA R+ +A ++
Sbjct: 358 PDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEV 417

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              MI  G  P+  TY LLI G   SG+  QAM
Sbjct: 418 LAAMIENGCQPNETTYTLLIEGIGFSGSRTQAM 450



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 197/431 (45%), Gaps = 43/431 (9%)

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLM 314
           T L+K  +  R+++  T     +M IL  +G  D  AYN ++    K   I      +  
Sbjct: 14  TKLIKGFFNSRNIDKAT----RVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDR 69

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSN 373
           + +   SP+  + +I+I T    GK+DLAL +F E+ +   C   +  Y  LI+      
Sbjct: 70  MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++E+ +LL EM   G +P  FT N + R LC+   V  A   VR +  +G +P V    
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L++ L   GK  E  ++++++   G  P++V YS  I  L    +++ ++ L + +   
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD   Y+ +I+  C+  ++  A +  + MI  G +P +  YN ++   CK+GN D A
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHA 309

Query: 554 ---------------------MLC--------------LSRMLEKESGSPDVITYTTLID 578
                                ML               +S+ML K    PDVITY +LI 
Sbjct: 310 VEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSK-GIDPDVITYNSLIS 368

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC  G  D+AI L  +M      PN +++  ++ GLCK  R   A+     M E G +P
Sbjct: 369 CLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQP 428

Query: 639 DMFVFVALISA 649
           +   +  LI  
Sbjct: 429 NETTYTLLIEG 439



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 1/199 (0%)

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV + + PD++  +  I G  + + +D A  +   +  HG  PDV AYN +ISG CKA R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A+ + + M  KG  P V T+N++I  +C  G ID A+     +L+  +  P +ITYT
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI+   + G  D+A+ L +EM  +G  P+  T+  +  GLCK  +   A    R +  +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 635 GMKPDMFVFVALISAFLSE 653
           G KPD+  +  L+ A L++
Sbjct: 180 GCKPDVITYNILLRALLNQ 198



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 182/445 (40%), Gaps = 54/445 (12%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           +A RI   + +  D +K + F SP  +    +I      G ++ A  +F+++ ++  C P
Sbjct: 56  KANRIESAKTVL-DRMKRKGF-SPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKP 113

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +Y  L+EA      +D     L EM   G   D +T   + +  C  G+ D+A    
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +   G   D   ++ILL A    G+ D+  + +  +       N  T+ +LI    + 
Sbjct: 174 RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRD 233

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++++++ L   M + G   DA  YD +I   C+  +L+MA++    M   G  PD    
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDI--- 290

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                    VN      N+IM  L  NG+ D A  +   +    
Sbjct: 291 -------------------------VNY-----NTIMAALCKNGNGDHAVEIFGKL---- 316

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
              +VG            PN SS++ +++ L   G    AL +  +M   G   +V  YN
Sbjct: 317 --DEVG----------CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYN 364

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI  LC    ++E+  LL +M    F+P   +  ++   LC+   +  A+ ++  M   
Sbjct: 365 SLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIEN 424

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEA 448
           G +P     TLLI+ +   G   +A
Sbjct: 425 GCQPNETTYTLLIEGIGFSGSRTQA 449


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 262/553 (47%), Gaps = 48/553 (8%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D    T ++   C   + D+A SV    +  G   ++V +++ +    K   VD A +L+
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           ++MD+        T+  L+ G +K  R+D+A+ + ++M + G +     Y V+I GL K 
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            ++E A +++ +M G+G  PD  + + LI                           LC S
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKG-------------------------LCKS 160

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                   G  ++AY L +     +  A            T  P+  ++  +I+ L K G
Sbjct: 161 --------GKPEEAYALYKEANARKHHA------------TAVPDVVTYTSLIDGLCKAG 200

Query: 339 KLDLALSLF-REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           ++  A  +F  E  + G + +   Y ++IDGLC   R+EE  E   EM   G++P   T 
Sbjct: 201 RILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 260

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++     + + +  A  + R+M   G         +++  LCK G+  EA+     M +
Sbjct: 261 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 320

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +  +V YSA + G      V  A+ELFR +   GC P++V+YNIII GLC+A ++A+
Sbjct: 321 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 380

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A   F +++ + L P V T+N  ++G C+  +     + L   +  +  SP++ +Y+ L+
Sbjct: 381 AYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILM 440

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG+C AG  + A+ ++ EM  +G AP+ + F  LI  LC   R   AL  FR + E+   
Sbjct: 441 DGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSA 499

Query: 638 PDMFVFVALISAF 650
           PD + + +L+   
Sbjct: 500 PDAWSYWSLLDGL 512



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 270/553 (48%), Gaps = 29/553 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+  ++  ++  LC+   +D     L+     G   D  T    +   C + + D A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +  ++ +   +   V ++ L+    K G +D+A  ++E+M +       KT+ V+I G 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG----SGI 236
            K  RV++A ++F  M  +G   DA +Y  +I GLCK+ + E A  LY E       +  
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM----TLLCNSIMRILVSNGSIDQA 292
            PD    + LI      G + L  +++++D  V        +   SI+  L   G +++ 
Sbjct: 183 VPDVVTYTSLIDGLCKAGRI-LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
                 M       + G E          P+  ++  +I+  +K   +  A  ++R+M Q
Sbjct: 242 CERFHEM------RNRGYE----------PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + +   YN ++DGLC + R+ E+Y     MEE G   T  T +++    C   +V  
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ L R+M  +G EP +    ++I+ LC+ GK  +A+ +   ++Q    PD+  ++A + 
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405

Query: 473 GLID-IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           GL   +  V   +ELF  + + G  P++ +Y+I++ G+C+A  +  A ++F EM+++G+ 
Sbjct: 406 GLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V  +N LI   C +G +D+A+    R LE+ S +PD  +Y +L+DGL    R ++A +
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVF-RELERRS-APDAWSYWSLLDGLSRCERMEEARL 523

Query: 592 LWNEMEEKGCAPN 604
           L   M+ +GCAP 
Sbjct: 524 LSFHMKLQGCAPR 536



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 234/501 (46%), Gaps = 56/501 (11%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            F V+I+G  ++ R+D+A  + ++  ++G   D   Y+V I GLCK ++++ A QL  +M
Sbjct: 9   AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                 P                                  T+   +++  L+  G +D+
Sbjct: 69  DEKKCLP---------------------------------TTVTYTALVDGLLKAGRLDE 95

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  +L+ M++               KG  SP   ++ ++I+ L K G+++ A  +F +M 
Sbjct: 96  AMAVLEQMVE---------------KGN-SPTLKTYTVVIDGLSKAGRVEEARRIFVDML 139

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM----EESGFKPTHFTLNSMFRCLCRR 407
             GC  + F+Y  LI GLC S + EE+Y L +E       +   P   T  S+   LC+ 
Sbjct: 140 GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKA 199

Query: 408 QDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
             ++ A  +     V+ G  P     T +I  LCK G+  E      +M   G+ PD V 
Sbjct: 200 GRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 259

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+A I G +  K +  A  ++R +   G     V YNII+ GLCKA RVAEA   F  M 
Sbjct: 260 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 319

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            +G + +V TY+ L++G+C  GN+  A+    RML++    P++++Y  +I GLC AG+ 
Sbjct: 320 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR-GCEPNLVSYNIIIRGLCRAGKL 378

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             A   + ++ ++   P+  TF A + GLC + D     +  F  M  +G  P++  +  
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           L+          +A E+ +EM
Sbjct: 439 LMDGICRAGGLEVALEIFREM 459



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 6/351 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+  +F ++IN L ++ +LD A S+     + GC  +   YN  IDGLC + R++++++
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           LL++M+E    PT  T  ++   L +   +  A+ ++ +M  +G+ P +K  T++I  L 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH----GCC 496
           K G+  EA R   DM+  G  PD   Y+A I GL    + + A  L+++  A        
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLF-NEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           PDVV Y  +I GLCKA R+ EA  +F +E + +G IP   TY  +I+G CK G +++   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M  +    PD +TY  LIDG   A     A  ++ +M + G   + +T+  ++ GL
Sbjct: 244 RFHEMRNR-GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  R   A   F  M+E+G    +  + AL+  F SE N   A E+ + M
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 216/498 (43%), Gaps = 67/498 (13%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG---- 60
           L +A R+     L + + + +C  +      L+  L   G ++EA  + +Q+  +G    
Sbjct: 52  LCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPT 111

Query: 61  ------------------------------LCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
                                          C P+ + Y  L++ LCKS   +      K
Sbjct: 112 LKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK 171

Query: 91  EMQDYGWGY----DKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHGWVDEHV-FSILLVA 144
           E            D  T T L+   C +G+  +A  VF +E ++ G++ + V ++ ++  
Sbjct: 172 EANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG 231

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G V++ CE    M +     +  T+  LI GF+K   + KA +++ +M +SG    
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y++I+ GLCK  ++  A   +  M+  G        S L+     EG ++  V+   
Sbjct: 292 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 351

Query: 265 E--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV-------------- 308
              DR      +  N I+R L   G + +AY   + +++     DV              
Sbjct: 352 RMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL 411

Query: 309 -----GVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                GVE+   M+ +GT SPN  S+ I+++ + + G L++AL +FREM   G   +V +
Sbjct: 412 DTVSDGVELFESMVSQGT-SPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LI  LC + R++E+ E+ RE+E     P  ++  S+   L R + +  A  L   M+
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMK 529

Query: 422 VQGHEPWVKHNTLLIKEL 439
           +QG  P  +H  L ++ L
Sbjct: 530 LQGCAP--RHYDLTVRFL 545


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/605 (26%), Positives = 276/605 (45%), Gaps = 52/605 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S+N ++   CK    D+ +     M  YG   D Y+   L+     +G  ++AL +
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGFV 181
            N++   G   + V + I+   F   G +  A E+I++M  D  ++ +  T+ VLI G  
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   +++AL+L   +  SGF  +  +Y V++  LCK  Q++ ALQL  EM+ + + PD  
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S LI                                   L   G + QA  L + M  
Sbjct: 363 TYSILIHG---------------------------------LCKQGKVQQAIQLYKEMCF 389

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + PN+ +   I+  L + G L  A   F  +       +V L
Sbjct: 390 NR----------------IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTL 433

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +IDG      +EE+  L + + +    P+  T NS+    C+ + VV A  L+  ++
Sbjct: 434 YNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIK 493

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           + G EP     T L+   C+ G   +    L +M  +   P +V Y+  I GL   ++++
Sbjct: 494 LHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLE 553

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            +++L  D+ A G  PD + YN II   CKA+ + +A +L ++M+   L P+ ATYN+LI
Sbjct: 554 ESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLI 613

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G C+ G+++ A   L  + ++      V  YTT+I   C+ G    A+ ++++M EKG 
Sbjct: 614 DGLCRYGDVEDADRVLVSLQDRNINLTKV-AYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
             +   + A+I  LCK      A  +F +M   G+ PD  +F  +++AF    +    FE
Sbjct: 673 EVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFE 732

Query: 662 VLKEM 666
           +L  M
Sbjct: 733 LLAVM 737



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 179/347 (51%), Gaps = 2/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  SF+ I++   K G  D+A S F  M + G + + + YN LI GL  +  +EE+ E
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV-QGHEPWVKHNTLLIKEL 439
           L  +ME+ G +P   T   + +       + GA  +++KM   +G +P +   T+LI   
Sbjct: 242 LTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGH 301

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G   EA R   D++  GF  +++ YS  +  L    +VD AL+L  ++ A+   PD+
Sbjct: 302 CQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDL 361

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+I+I GLCK  +V +A  L+ EM    + P+   ++ ++ G C+ G +  A +    
Sbjct: 362 VTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDS 421

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ++   +  PDV  Y  +IDG    G  ++A+ L+  + +K   P+ +TF +LI G CK  
Sbjct: 422 LI-MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR 480

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   A      +K  G++P    +  L++A+  E N     E+L EM
Sbjct: 481 KVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEM 527



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 253/559 (45%), Gaps = 56/559 (10%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-----------------DLV 85
           +GL + A   F  + + G+ +P+ YSYN L+  L  + S+                 D+V
Sbjct: 198 LGLADVAKSFFCMMLKYGI-LPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMV 256

Query: 86  EMRL-------------------KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
             ++                   K + D G   D  T T L+  +C  G  ++AL +  +
Sbjct: 257 TYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRD 316

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++  G+ ++  ++S+LL +  K G+VD+A +L+  M+  N++ +  T+ +LIHG  K+ +
Sbjct: 317 LLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGK 376

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V +A+QL+ +M  +    ++  +  I+ GLC+   L  A   +  +  S + PD  + + 
Sbjct: 377 VQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436

Query: 246 LITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           +I      G++   V+  +   D+ +    +  NS++     N  + +A  LL      E
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL------E 490

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            I   G+E          P+  ++  ++N   ++G ++    L  EM        V  Y 
Sbjct: 491 SIKLHGLE----------PSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT 540

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +I GLC   +LEES +LL +M   G  P   T N++ +C C+ +D+  A  L+  M + 
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             EP      +LI  LC++G   +A R L  +         V Y+  I           A
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA 660

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +++F  +   G    +  Y+ +I+ LCK   + EA+  F  M++ G+ P    + +++N 
Sbjct: 661 VKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNA 720

Query: 544 WCKSGNIDQAMLCLSRMLE 562
           + ++G++      L+ M++
Sbjct: 721 FHRAGHVHSVFELLAVMIK 739



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 241/542 (44%), Gaps = 62/542 (11%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL----CKSCSVDLVEM 87
           +   LI  L   G +EEA  L + ++++GL  P+  +Y  + +        S + ++++ 
Sbjct: 222 SYNILIHGLIVAGSMEEALELTNDMEKQGL-QPDMVTYKIVAKGFHLLGLMSGAREIIQ- 279

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFS 146
             K + D G   D  T T L+  +C  G  ++AL +  +++  G+ ++  ++S+LL +  
Sbjct: 280 --KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+VD+A +L+  M+  N++ +  T+ +LIHG  K+ +V +A+QL+ +M  +    ++ 
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIW 264
            +  I+ GLC+   L  A   +  +  S + PD  + + +I      G++   V+  +  
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            D+ +    +  NS++     N  + +A  LL      E I   G+E          P+ 
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLL------ESIKLHGLE----------PSA 501

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  ++N   ++G ++    L  EM        V  Y  +I GLC   +LEES +LL +
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHN----------- 432
           M   G  P   T N++ +C C+ +D+  A  L+  M +   EP    +N           
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621

Query: 433 -----------------------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
                                  T +IK  C  G A  A +    MV++GF   I  YSA
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSA 681

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I  L     ++ A   F  + + G  PD   + ++++   +A  V    +L   MI  G
Sbjct: 682 VINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741

Query: 530 LI 531
           L+
Sbjct: 742 LL 743



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 162/358 (45%), Gaps = 40/358 (11%)

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +LQ  +    + D    ++ + +  + P+  +++ ++  L      D+   ++ ++   
Sbjct: 88  QMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDS 144

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G  Q+    + ++DGLC  +R  ++   LR+ +   F P+  + N+              
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNT-------------- 190

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
                                ++   CK G A  A  F   M++ G LPD   Y+  I G
Sbjct: 191 ---------------------IMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHG 229

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT-KGLIP 532
           LI    ++ ALEL  D+   G  PD+V Y I+  G      ++ A ++  +M+T +GL P
Sbjct: 230 LIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKP 289

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TY +LI G C+ GNI++A L L R L       +VI Y+ L+  LC  G+ D+A+ L
Sbjct: 290 DLVTYTVLICGHCQMGNIEEA-LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQL 348

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             EME     P+ +T+  LI GLCK  + + A+  ++ M    + P+ F    ++   
Sbjct: 349 LYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 3/295 (1%)

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           S  + ++  +L +M+E   +P+  T NS+   L R  D++   ++   ++  G     + 
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL-RHTDIM--WDVYNDIKDSGTPQSART 152

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
           +++++  LC   +  +A  FL     + F P +V ++  +     +   D+A   F  + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +G  PD  +YNI+I GL  A  + EA +L N+M  +GL P + TY ++  G+   G + 
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A   + +ML  E   PD++TYT LI G C  G  ++A+ L  ++   G   N I +  L
Sbjct: 273 GAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVL 332

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++ LCK  +   AL     M+   ++PD+  +  LI     +     A ++ KEM
Sbjct: 333 LSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/672 (24%), Positives = 316/672 (47%), Gaps = 62/672 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS AR +  +  + + +    C         +I+  G   + + A  +F +++    C P
Sbjct: 53  LSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEP 112

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              SYN LL A  ++     VE      +  G   +  T   L+++ C   +F+KA    
Sbjct: 113 GIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           N +   G+  + VFS                                 +  +I+   K  
Sbjct: 173 NWMWKEGFKPD-VFS---------------------------------YSTVINDLAKTG 198

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEIL 243
           ++D AL+LFD+M++   A D   Y+++I G  K K  +MA+QL+ ++ + S + P+ +  
Sbjct: 199 KLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTH 258

Query: 244 SKLITSCSDEGELTLLVKEIWE-----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           + +I+  S  G +   +K IW+     +R+ +  T   +S++  L   G++D+A ++   
Sbjct: 259 NIMISGLSKCGRVDDCLK-IWDRMKQNEREKDLYTY--SSLIHGLCDEGNVDKAESVFNE 315

Query: 299 MIKGEPIADV------------------GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +++ +   DV                   +E+  I +   S N  S++I+I  LL++GK+
Sbjct: 316 LVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKI 375

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  ++R M   G   +   Y   I GLC +  + ++  +++E+E  G     +   S+
Sbjct: 376 DEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASI 435

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             CLC+++ +  A NLV++M   G E        LI  L +  +  +A   +  M + G 
Sbjct: 436 IDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGC 495

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LP +V Y+  I GL +  +   A    +++  +G  PD+  Y+I++ GLC+ +++  A +
Sbjct: 496 LPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALE 555

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L+++ +  GL P V  +N+LI+G C  G +D AM  ++ M E  + + +++TY TL++G 
Sbjct: 556 LWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM-EHRNCTANLVTYNTLMEGY 614

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
                 + A ++W  M + G  P+ I++  ++ GLC C R   A+  F   +  G+ P +
Sbjct: 615 FKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTV 674

Query: 641 FVFVALISAFLS 652
           + +  L+ A ++
Sbjct: 675 YTWNILVRAVVN 686



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 238/585 (40%), Gaps = 90/585 (15%)

Query: 120 ALSVFNEIIDH-GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           A ++F+    H G+    V +  +L   S+   V     ++E +     + +E     +I
Sbjct: 26  AFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVI 85

Query: 178 HGFVKKSRVDKALQLFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
             + K S  D+AL +F +M +  G       Y+ ++    + KQ      L++  + +G+
Sbjct: 86  KTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P+ +  + LI     + E                                  ++A   L
Sbjct: 146 APNLQTYNVLIKMSCKKKEF---------------------------------EKARGFL 172

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M                +K    P+  S+  +IN L K GKLD AL LF EM++    
Sbjct: 173 NWM----------------WKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVA 216

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREM-EESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
            +V  YN LIDG       + + +L  ++ E+S   P   T N M   L +   V   L 
Sbjct: 217 PDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  +M+    E  +   + LI  LC  G   +A     ++V+     D+V Y+  +GG  
Sbjct: 277 IWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFC 336

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              ++  +LEL+R I       ++V+YNI+I GL +  ++ EA  ++  M  KG      
Sbjct: 337 RCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNT 395

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC-------------- 581
           TY + I+G C +G +++A L + + +E + G  DV  Y ++ID LC              
Sbjct: 396 TYGIFIHGLCVNGYVNKA-LGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE 454

Query: 582 ----------------IAG-----RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                           I G     R  DA +L   M + GC P  +++  LI GLC+  +
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGK 514

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
              A    + M E G+KPD+  +  L+     +    LA E+  +
Sbjct: 515 FGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQ 559



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 39/374 (10%)

Query: 330 IINTLLKDGKLDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           +I T  K+   D AL +F+ M +I GC   +  YN L++    + +  +   L    E +
Sbjct: 84  VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T N + +  C++++   A   +  M  +G +P V   + +I +L K GK  +A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC-PDVVAYNIIIS 507
                +M +    PD+ CY+  I G +  K   +A++L+  +       P+V  +NI+IS
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263

Query: 508 GLCKAQRVAE-----------------------------------AEDLFNEMITKGLIP 532
           GL K  RV +                                   AE +FNE++ +    
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V TYN ++ G+C+ G I ++ L L R++E+ + S ++++Y  LI GL   G+ D+A M+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKES-LELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMI 381

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W  M  KG A +  T+   I GLC       AL   + ++ KG   D++ + ++I     
Sbjct: 382 WRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCK 441

Query: 653 ELNPPLAFEVLKEM 666
           +     A  ++KEM
Sbjct: 442 KRRLEEASNLVKEM 455


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/649 (26%), Positives = 307/649 (47%), Gaps = 34/649 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G    A+ ++ Q+ R G+ VP+ +  + ++ A CK   VD     +K+M++ G   +  T
Sbjct: 171 GETHTAHYVYQQMIRVGI-VPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 229

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERM 161
              L+  Y + G  + A  V   + + G V  +V  +++L+  + K  ++D+A +++  M
Sbjct: 230 YHSLINGYVSLGDVEAAKGVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 288

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
            ++  +  +E+ + VLI G+ +  ++D A++L D+M + G  ++  + + +I G CK  +
Sbjct: 289 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 348

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLC 276
           +  A  + + M    + PD    + L+     EG       L  K + E  +   +T   
Sbjct: 349 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY-- 406

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM------------------IFK 317
           N++++ L   G+ D A  +   M+K G    +VG   L+                  I  
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              + +  +F+ +I+ L K GK+  A  +F +M  +GC  +   Y  LIDG C ++ + +
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++++   ME     P+    NS+   L + + +V   +L+ +M ++G  P +     LI 
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK G   +AF    +M + G   +I+  S  + GL  + R+D A  L + +  HG  P
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D   +   +    +   + +  D  +E     L+P+   YN+ I G CK+G +D A    
Sbjct: 647 D---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 703

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           S ML  +   PD  TY TLI G   AG  D+A  L +EM  +G  PN +T+ ALI GLCK
Sbjct: 704 S-MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 762

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    A   F  + +KG+ P++  +  LI  +    N   AF++  +M
Sbjct: 763 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 272/605 (44%), Gaps = 41/605 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
            F  V ++    PN  SY  L+  L +    D     L ++ D     D+  +       
Sbjct: 54  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVI------ 107

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
                +D+ + V+ E          VF ++L  + + G    A  + + M  C    + +
Sbjct: 108 -----WDELVGVYREFA----FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLR 158

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +   L++  VK      A  ++ +M + G   D  M  +++   CK+ +++ A     +M
Sbjct: 159 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 218

Query: 232 KGSGITPDFEILSKLITSCSDEGELTL------LVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +  G+ P+      LI      G++         + E    R+V T TLL     +    
Sbjct: 219 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK---- 274

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +D+A  +L+ M +               +  + P+  ++ ++I+   + GK+D A+ 
Sbjct: 275 QCKMDEAEKVLRGMQE---------------EAALVPDERAYGVLIDGYCRTGKIDDAVR 319

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM ++G   N+F+ N+LI+G C    + E+  ++  M +   KP  ++ N++    C
Sbjct: 320 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 379

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R      A NL  KM  +G EP V     L+K LC+ G   +A +    M++ G  PD V
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 439

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS  + GL  ++  + A  L++DI A G     + +N +ISGLCK  ++ EAE++F++M
Sbjct: 440 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 499

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P   TY  LI+G+CK+ N+ QA      M E+E  SP +  Y +LI GL  + R
Sbjct: 500 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM-EREPISPSIEMYNSLISGLFKSRR 558

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +   L  EM  +G  PN +T+ ALI G CK      A   +  M E G+  ++ +   
Sbjct: 559 LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 618

Query: 646 LISAF 650
           ++S  
Sbjct: 619 MVSGL 623



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 278/603 (46%), Gaps = 83/603 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           LI    S+G VE A  +   +  +G+   N  +Y  L++  CK C +D  E  L+ MQ+ 
Sbjct: 233 LINGYVSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
                D+     L+  YC +G+ D A+ + +E++  G   +  + + L+  + K GE+ +
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  +I RM D N++ +  ++  L+ G+ ++    +A  L DKM + G       Y+ ++ 
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWED--- 266
           GLC+    + ALQ++  M   G+ PD      +L  L    + EG  TL     W+D   
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL-----WKDILA 466

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM--------------------------- 299
           R      +  N+++  L   G + +A  +   M                           
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQ 526

Query: 300 ---IKG----EPIADVGVEMLM-----IFKGT----------------VSPNTSSFDIII 331
              +KG    EPI+   +EM       +FK                  ++PN  ++  +I
Sbjct: 527 AFKVKGAMEREPISP-SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K+G LD A S + EMT+ G   N+ + + ++ GL    R++E+  L+++M + GF 
Sbjct: 586 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 645

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL----IKELCKHGKAME 447
           P H        C  +      A+  +     +  + ++  N ++    I  LCK GK  +
Sbjct: 646 PDH-------ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A RF + +  +GF+PD   Y   I G      VD A  L  ++   G  P++V YN +I+
Sbjct: 699 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 758

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLCK++ V  A+ LF+++  KGL P+V TYN LI+G+CK GN+D A     +M+E E  S
Sbjct: 759 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE-EGIS 817

Query: 568 PDV 570
           P +
Sbjct: 818 PSI 820



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 200/445 (44%), Gaps = 26/445 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   EA  L D++ +EG+  P   +YN LL+ LC+  + D        M   G   D+  
Sbjct: 382 GHTSEAFNLCDKMLQEGI-EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 440

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + LL        F+ A +++ +I+  G+    + F+ ++    K G++ +A E+ ++M 
Sbjct: 441 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D     +  T+  LI G+ K S V +A ++   M +   +    MY+ +I GL K+++L 
Sbjct: 501 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 560

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
               L +EM   G+TP+      LI     EG L       +E  +  ++   ++C++++
Sbjct: 561 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 620

Query: 281 RILVSNGSIDQAYNLLQAMIKG-------------------EPIADVGVEMLMIFKGTVS 321
             L   G ID+A  L+Q M+                     + IAD   E    F   + 
Sbjct: 621 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF---LL 677

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN   ++I I  L K GK+D A   F  ++  G + + F Y  LI G   +  ++E++ L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM   G  P   T N++   LC+ ++V  A  L  K+  +G  P V     LI   CK
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVC 466
            G    AF+    M++EG  P I C
Sbjct: 798 IGNMDAAFKLKDKMIEEGISPSIQC 822


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 271/595 (45%), Gaps = 40/595 (6%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
            G +I     +G +E+A  L +++    L V N + YN ++   CK   +      L EM
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQV-NLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
              G   D Y+   L+  YC  G  +KA   +N ++ +G+    + ++ LL  F   G +
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D A  L   M    I  NE +   L+ GF K  + +KAL L+ +    G A +   ++ +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I GLCK +++  A +L  +MK     PD      L +     G++         DR    
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM---------DRASRI 581

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA-------DVGVEMLMIFKGTVSPNT 324
           +  L          N           ++I G  IA       D+  EM       +SPNT
Sbjct: 582 LNEL---------ENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMS---NRGLSPNT 629

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I    K+G L  A +L+ EM + G + N+F+ ++L+       + +E+  +L+ 
Sbjct: 630 VAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQN 689

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +  +   P              R ++    N +  +    H        ++I  LCK G+
Sbjct: 690 LVGTDMIPD---------ISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGR 740

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A   L D+  +GF+ D   YS+ I G      VD+A +L   + + G  P++V YN 
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GLCK+  ++ A  LF ++ TKG+ P+  TYN LI+  CK G I +A     RM+E E
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE-E 859

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
              P V TY+ LI+GLC  G  ++AI L ++M E    PN +T+  LI G  +C+
Sbjct: 860 GIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 157/641 (24%), Positives = 281/641 (43%), Gaps = 52/641 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDK 101
           VG   +A  + D +   G   PN  +Y  L++  C   +++  E  ++E+ ++     D+
Sbjct: 291 VGQTNDARRMLDSLPGRGFS-PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDE 349

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIER 160
                ++  YC  G+ + A  + NE++D    V+  V++I++  + K G + +A  ++  
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M    +R +  ++  L+ G+ KK  ++KA + ++ M ++GFA+    Y+ ++ G C    
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 221 LEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           ++ AL+L+  M   GI P+      +L     S   E  L L  + +      NT T   
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTF-- 527

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+++  L     + +A  L+  M +                    P+  ++  + +   K
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWR----------------CPPDIITYRTLFSGYCK 571

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +D A  +  E+  +G    +  +N+LI G   + +  +  ++L EM   G  P    
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVA 631

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++    C+  D+  A NL  +M  +G  P +   + L+    + GK  EA   L ++V
Sbjct: 632 YGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV 691

Query: 457 QEGFLPDI--------------------------VCYSAAIGGLIDIKRVDLALELFRDI 490
               +PDI                          + ++  I GL  + R++ A  L  D+
Sbjct: 692 GTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADL 751

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G   D   Y+ +I G   +  V  A DL + M++ GL P++ TYN LI G CKSG +
Sbjct: 752 KDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGEL 811

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A + L + L  +  SP+ ITY TLID  C  G   +A  L   M E+G  P   T+  
Sbjct: 812 SRA-VSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSI 870

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           LI GLC       A+     M E  + P+   +  LI  ++
Sbjct: 871 LINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYV 911



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 176/721 (24%), Positives = 313/721 (43%), Gaps = 102/721 (14%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +AS+LS      PL     +V K   F S  +   L+R L + G ++ A  +FD+++  G
Sbjct: 145 LASLLSARPPAPPLFPHLVEVYKEFSF-SAASFDLLLRALANAGQLDGALQVFDEMRTLG 203

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C  +  S N +L  L ++  +       ++MQ  G   DK+T+  + + YC       A
Sbjct: 204 -CRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHA 262

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD---------------- 163
           L    E+   G  V+   +  ++  + + G+ + A  +++ +                  
Sbjct: 263 LEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKG 322

Query: 164 -CN-------------IRLN------EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            CN             IR N      E  F  +I+G+ +  R++ A +L ++M  S    
Sbjct: 323 YCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQV 382

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           +  +Y+++I G CK  ++  A  +  EM G G+ PD    + L+     +G    L+ + 
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKG----LMNKA 438

Query: 264 WEDRDVNTM--------TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
           +E    NTM        TL  N++++   S GSID A  L                 LM+
Sbjct: 439 FET--YNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLW---------------FLML 481

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG ++PN  S   +++   K GK + AL+L++E    G  +N   +N +I+GLC   R+
Sbjct: 482 KKG-IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERM 540

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH-NTL 434
            E+ EL+ +M++    P   T  ++F   C+  D+  A  ++ ++   G  P ++  N+L
Sbjct: 541 PEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSL 600

Query: 435 LIKELC--KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           +       +HGK  +    L +M   G  P+ V Y A I G      +  A  L+ ++  
Sbjct: 601 ITGHFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIE 657

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT---------------- 536
            G  P++   + ++S   +  +  EA  +   ++   +IP ++                 
Sbjct: 658 KGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVA 717

Query: 537 ----------YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                     +N++I G CK G I+ A   L+ + +K     D  TY++LI G   +G  
Sbjct: 718 GGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK-GFVADNFTYSSLIHGCSASGFV 776

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D A  L + M   G  PN +T+ +LI GLCK      A+  F+ +  KG+ P+   +  L
Sbjct: 777 DVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTL 836

Query: 647 I 647
           I
Sbjct: 837 I 837



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 194/424 (45%), Gaps = 37/424 (8%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++ ILV       A  +L +++   P A      L+      S + +SFD+++  L   G
Sbjct: 128 LLHILVRARRSADARAILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAG 187

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +LD AL +F EM  +GC  ++   N++++ L  +  L  +  +  +M+ +G  P  FT+ 
Sbjct: 188 QLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVA 247

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M +  C+ + VV AL  V +M   G E  +     ++   C+ G+  +A R L  +   
Sbjct: 248 IMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR 307

Query: 459 GFLPDIVCYS------------------------------------AAIGGLIDIKRVDL 482
           GF P+IV Y+                                    A I G   + R++ 
Sbjct: 308 GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMED 367

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L  ++       ++  YNI+I+G CK  R+ EA ++ +EM   G+ P   +YN L++
Sbjct: 368 AARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVD 427

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+CK G +++A    + ML +   +   +TY  L+ G C  G  DDA+ LW  M +KG A
Sbjct: 428 GYCKKGLMNKAFETYNTML-RNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIA 486

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN I+   L+ G  K  +   AL  ++    +G+  +   F  +I+        P A E+
Sbjct: 487 PNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEEL 546

Query: 663 LKEM 666
           + +M
Sbjct: 547 VDKM 550



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/601 (24%), Positives = 258/601 (42%), Gaps = 86/601 (14%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++V SR  ++      +I     +G + EA+ +  ++   G+  P+ YSYN L++  
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGV-RPDTYSYNSLVDGY 429

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK   ++        M   G+     T   LL+ +C+ G  D AL ++  ++  G     
Sbjct: 430 CKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE 489

Query: 137 VF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           +  S LL  F K G+ +KA  L +      +  N  TF  +I+G  K  R+ +A +L DK
Sbjct: 490 ISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDK 549

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSD 252
           M +     D   Y  +  G CK   ++ A ++ +E++  G  P  E  + LIT       
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609

Query: 253 EGELTLLVKEI------------------W-EDRDVNTMT---------------LLCNS 278
            G++  ++ E+                  W ++ D++T                  +C+S
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI-----FKGTVSPNTSS-----FD 328
           ++      G  D+A  +LQ ++  + I D+    L I     F  TV+          ++
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I  L K G+++ A +L  ++   G + + F Y++LI G   S  ++ +++L   M   
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAME 447
           G  P   T NS+   LC+  ++  A++L +K+  +G  P  + +NTL+ K  CK G   E
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKH-CKDGYITE 848

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           AF+    M++EG                                     P V  Y+I+I+
Sbjct: 849 AFKLKQRMIEEGI-----------------------------------HPTVFTYSILIN 873

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC    + EA  L ++MI   + P+  TY  LI G+ +  ++D  ++ L +       S
Sbjct: 874 GLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTIVVKAS 933

Query: 568 P 568
           P
Sbjct: 934 P 934



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 221/511 (43%), Gaps = 66/511 (12%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
           F+  AA +D+++  L    QL+ ALQ++ EM+  G        + ++   +  G+L   V
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
               + +    +         + +   +  +   ++ A+   E +  +GVE+ ++    V
Sbjct: 229 AVFEQMQRAGALP----DKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV 284

Query: 321 -------------------------SPNTSSFDIIINTLLKDGKLDLALSLFREMT---- 351
                                    SPN  ++ +++     +  ++ A  + +E+     
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344

Query: 352 ----------------QIGCMQ----------------NVFLYNNLIDGLCNSNRLEESY 379
                           Q+G M+                N+F+YN +I+G C   R+ E++
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L EM   G +P  ++ NS+    C++  +  A      M   G          L+K  
Sbjct: 405 NILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGF 464

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G   +A R    M+++G  P+ +  S  + G     + + AL L+++  A G   + 
Sbjct: 465 CSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNT 524

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             +N +I+GLCK +R+ EAE+L ++M      P + TY  L +G+CK G++D+A   L+ 
Sbjct: 525 TTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE 584

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            LE    +P +  + +LI G  IA +      +  EM  +G +PN + + ALI G CK  
Sbjct: 585 -LENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEG 643

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
               A   +  M EKG+ P++F+  +L+S F
Sbjct: 644 DLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 275/610 (45%), Gaps = 34/610 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            E+A  +FD++ R G    + Y  NC L  + +      V  R   M   G       +T
Sbjct: 35  AEDARHVFDELLRRGRGA-SIYGLNCALADVARHSPAAAVS-RYNRMARAGAD----EVT 88

Query: 106 PLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
           P L  Y       C +G+ D   +    +I  G+ VD   F+ LL           A ++
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 158 I-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGG 214
           +  RM       N  ++ +L+ G   ++R  +AL+L   M   G     D   Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K   L+ A   Y EM   GI P+    S +I +         L K    D+ +  +T 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA---------LCKAQAMDKAMEVLTS 259

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M    +  SI   Y        G+P   +G    M   G V P+  +++ +++ 
Sbjct: 260 MVKNGVMPNCRTYNSIVHGY-----CSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDY 313

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+  + +     ++  V  A+ +  KMR QG  P       +I  LCK G+  +A R+  
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ E   P  + Y++ I  L    + D A EL  ++   G C D + +N II   CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TY+ LI+G+C +G +D+A   L+ M+      PD +TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTY 552

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 613 SGTQLELSTY 622



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 279/606 (46%), Gaps = 44/606 (7%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+ L+ M D G     D  + T ++  +   G  D
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA   ++E++D G +   V +S ++ A  K   +DKA E++  M    +  N +T+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           P+      L+   + +G L        L+V+            L+C          G +D
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC-----AYAKQGKVD 391

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA  +   M                 +  ++P+T ++  +I  L K G+++ A+  F +M
Sbjct: 392 QAMLVFSKM----------------RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                     +YN+LI  LC  ++ +++ EL+ EM + G        NS+    C+   V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + +  L   M   G +P +   + LI   C  GK  EA + L  MV  G  PD V Y+  
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I R++ AL LFR++ + G  PD++ YNII+ GL + +R A A++L+  +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 531 IPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              ++TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGR 669

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A  L+  +   G  P+  T+  +   L +          F  M+E G   +  +  +
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 646 LISAFL 651
           ++   L
Sbjct: 730 IVRKLL 735



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 213/488 (43%), Gaps = 30/488 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI       R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 231 MKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRI 282
           M   G  P+   + IL K +   +   E   L++ + +D      DV + T + N   + 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK- 211

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D+AY     M+      D G+           PN  ++  II  L K   +D 
Sbjct: 212 ---EGDLDKAYGTYHEML------DRGI----------LPNVVTYSSIIAALCKAQAMDK 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+  
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  +   M  +G +P +     L++     G  +E    L  MV+ G  P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +S  I       +VD A+ +F  +   G  PD V Y  +I  LCK+ RV +A   F
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI + L P    YN LI+  C     D+A   +  ML++     D I + ++ID  C 
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR  ++  L++ M   G  P+ IT+  LI G C   +   A      M   GMKPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 643 FVALISAF 650
           +  LI+ +
Sbjct: 552 YNTLINGY 559



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C S         LK+M   G   D  T   L+   C +G+  +A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  N   F +LI  + 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   D   Y  +IG LCK+ ++E A++ + +M    ++P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 446 VYNSLIHS--------LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          P+  ++  +I+     GK+D A  L   M 
Sbjct: 498 SEKLFDLMVR------IGVK----------PDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R+E++  L REME SG  P   T N + + L + +   
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   L  + EK 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P++  Y   IG      R+DL      ++  
Sbjct: 61  LADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
            G   D +A+  ++ GLC  +R ++A D+    +T+ G IP+V +YN+L+ G C   N  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDE-NRS 178

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           Q  L L +M+  + G   PDV++YTT+I+G    G  D A   ++EM ++G  PN +T+ 
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/623 (26%), Positives = 293/623 (47%), Gaps = 22/623 (3%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
            A +L  +++++ L  P+  +YN L+        ++        M          T T +
Sbjct: 242 RAFLLLKRMRKDDL-TPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTM 300

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  YC + + DKALSV +E+   G +  E  +S LL  + K   +  A +L+  +    I
Sbjct: 301 IDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGI 360

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            +N+    +LI GF +   + KA Q+   M + G   D   Y  +I G+C+  ++    +
Sbjct: 361 TINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKE 420

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILV 284
           + S M+ SGI P+  + + LI      G + + +K   +   R +    ++ N+++R   
Sbjct: 421 ILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFY 480

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G I +A +  Q M                 +  +S N+ SF+ II++    GK+  A 
Sbjct: 481 REGMITEAEHFRQYM----------------SRMNISFNSVSFNCIIDSYCHRGKIVEAF 524

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           S++ +M + G   NV  Y NL+ GLC    L ++ + +  + +        T N++   +
Sbjct: 525 SVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGI 584

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  AL++  KM      P +   T+L+   C+ GK + A   L  M+++G +PD 
Sbjct: 585 CKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDT 644

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           V Y+  + GLI+  +V  A  +F++I C  G   D +AYN +++G  K   V   + + +
Sbjct: 645 VAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMS 704

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +M    + P+ A+YN+L++G+ K G   ++ L L + + ++   PD +TY  LI GL   
Sbjct: 705 DMYQNEVYPNSASYNILMHGYVKRGQFSKS-LYLYKYMVRKGIRPDNVTYRLLILGLSEC 763

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D A+    +M  +G  P+++ F  LIT   +  +   AL  F  MK   + P    F
Sbjct: 764 GLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTF 823

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            A+I+  + +     + EVL EM
Sbjct: 824 SAMINGLIRKNYLDQSHEVLHEM 846



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/599 (25%), Positives = 276/599 (46%), Gaps = 22/599 (3%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G V+ A   F  + R GL V N   +N LL A  +   +   E   + M      ++  +
Sbjct: 448  GYVKVALKHFVDIYRRGL-VANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVS 506

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
               ++  YC+ G+  +A SV+++++ +G       +  LL    + G + +A + +  + 
Sbjct: 507  FNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLL 566

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            D    ++EKTF  L+ G  K   +D+AL + +KM K+    D   Y +++ G C+  ++ 
Sbjct: 567  DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKIL 626

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
             AL +   M   G+ PD    + L+    +EG++   + + +EI     +    +  NS+
Sbjct: 627  PALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSL 686

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            M   +  G+++    ++  M + E                V PN++S++I+++  +K G+
Sbjct: 687  MNGYLKGGNVNTIKRMMSDMYQNE----------------VYPNSASYNILMHGYVKRGQ 730

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               +L L++ M + G   +   Y  LI GL     ++ + + L +M   G  P     + 
Sbjct: 731  FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDI 790

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            +      +  +  AL L   M+     P  K  + +I  L +     ++   L +M+Q G
Sbjct: 791  LITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVG 850

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              P+   Y A +     +  +D A  L  ++ A G  P  VA + II GLC+  ++ EA 
Sbjct: 851  LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAV 910

Query: 520  DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             +F+ M+  G++P+VAT+  L++  CK   I  A L L R++E      DV++Y  LI G
Sbjct: 911  IVFSNMMRSGMVPTVATFTTLMHSLCKESKIADA-LHLKRLMELCRLKVDVVSYNVLITG 969

Query: 580  LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC      DA+ L+ EM+ KG  PN  T++ L   +    R +        ++E+G+ P
Sbjct: 970  LCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/602 (22%), Positives = 263/602 (43%), Gaps = 27/602 (4%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-I 128
           N LL +LC +      E  L++M+      +  T   +L  Y   G+F  AL V  ++  
Sbjct: 159 NILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKKGRFKAALCVLEDMER 217

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           D    D + ++I++    +     +A  L++RM   ++  +E T+  LI+GF  + +++ 
Sbjct: 218 DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINH 277

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  +F+ M +       A Y  +I G C+N++++ AL + SEM+ +G+ P     S L+ 
Sbjct: 278 ARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLN 337

Query: 249 SCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                      L L+V    + R +     +C  ++      G I +A  +L++M++   
Sbjct: 338 GYCKVSMLGPALDLMVD--LKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGI 395

Query: 305 IADVGVEMLMIF-------------------KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
             DV     +I                    K  + PN   +  +I    K G + +AL 
Sbjct: 396 DPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALK 455

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
            F ++ + G + N  ++N L+        + E+    + M          + N +    C
Sbjct: 456 HFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYC 515

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            R  +V A ++   M   GH P V     L++ LC+ G  ++A +F+  ++      D  
Sbjct: 516 HRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEK 575

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            ++A + G+     +D AL++   +  + C PD+  Y I++SG C+  ++  A  +   M
Sbjct: 576 TFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMM 635

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           + KG++P    Y  L+NG    G +  A      ++ KE    D I Y +L++G    G 
Sbjct: 636 LEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGN 695

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            +    + ++M +    PN  ++  L+ G  K  +   +L  ++ M  KG++PD   +  
Sbjct: 696 VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRL 755

Query: 646 LI 647
           LI
Sbjct: 756 LI 757



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 284/637 (44%), Gaps = 26/637 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VG + +A  +   +  +G+  P+  +Y+ L+  +C+   +   +  L  MQ  
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGI-DPDVVTYSALINGMCRMAKMHETKEILSRMQKS 428

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKA 154
           G   +    T L+  YC +G    AL  F +I   G V   V  + LL AF + G + +A
Sbjct: 429 GILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEA 488

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
               + M   NI  N  +F  +I  +  + ++ +A  ++D M + G + +   Y  ++ G
Sbjct: 489 EHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRG 548

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+   L  A Q             F +L   I S  DE     L+  I +   ++    
Sbjct: 549 LCQGGHLVQAKQFM-----------FCLLD--IPSAVDEKTFNALLLGICKYGTLDEALD 595

Query: 275 LCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           +C      +V N  +   +    LL    +   I    V + M+ +  V P+T ++  ++
Sbjct: 596 ICEK----MVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLL 651

Query: 332 NTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           N L+ +G++  A  +F+E+  + G   +   YN+L++G      +     ++ +M ++  
Sbjct: 652 NGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEV 711

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   + N +     +R     +L L + M  +G  P      LLI  L + G    A +
Sbjct: 712 YPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVK 771

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGL 509
           FL  MV EG  PD + +   I    +  ++  AL LF  + C H   P    ++ +I+GL
Sbjct: 772 FLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLH-LSPSSKTFSAMINGL 830

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            +   + ++ ++ +EM+  GL P+   Y  L+N  C+ G ID+A   L   ++     P 
Sbjct: 831 IRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR-LKEEMKAIGIVPA 889

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
            +  +++I GLC  G+ ++A+++++ M   G  P   TF  L+  LCK  +   AL   R
Sbjct: 890 EVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKR 949

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +M+   +K D+  +  LI+    + +   A ++  EM
Sbjct: 950 LMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEM 986



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 271/615 (44%), Gaps = 41/615 (6%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N+  +  L++A  K   V    + +  M D G+         +L+     G+        
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E +   + +D    +ILL +    GE  KA +++++M  C +  N  T+  ++H +VKK
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKK 202

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R   AL + + M +    +D   Y+++I  LC+ K+   A  L   M+   +TPD    
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 244 SKLITSCSDEGELT--------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + LI     EG++         +L + +     V T T + +   R    N  ID+A ++
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPS--VATYTTMIDGYCR----NRRIDKALSV 316

Query: 296 LQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  M I G                 V P+  ++  ++N   K   L  AL L  ++   G
Sbjct: 317 LSEMEITG-----------------VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRG 359

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N  +   LIDG C    + ++ ++L+ M E G  P   T +++   +CR   +    
Sbjct: 360 ITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETK 419

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            ++ +M+  G  P     T LI   CK G    A +   D+ + G + + V ++A +   
Sbjct: 420 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAF 479

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                +  A    + +       + V++N II   C   ++ EA  ++++M+  G  P+V
Sbjct: 480 YREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNV 539

Query: 535 ATYNLLINGWCKSGNIDQA---MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            TY  L+ G C+ G++ QA   M CL  +      + D  T+  L+ G+C  G  D+A+ 
Sbjct: 540 CTYQNLLRGLCQGGHLVQAKQFMFCLLDI----PSAVDEKTFNALLLGICKYGTLDEALD 595

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +  +M +  C P+  T+  L++G C+  +   ALV  +MM EKG+ PD   +  L++  +
Sbjct: 596 ICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLI 655

Query: 652 SELNPPLAFEVLKEM 666
           +E     A  V +E+
Sbjct: 656 NEGQVKAASYVFQEI 670



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 133/574 (23%), Positives = 247/574 (43%), Gaps = 63/574 (10%)

Query: 20   DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
            D+ +     +P     L+R     G++ EA      + R  +   N+ S+NC++++ C  
Sbjct: 459  DIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISF-NSVSFNCIIDSYCHR 517

Query: 80   CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVF 138
              +        +M  YG   +  T   LL+  C  G   +A      ++D    VDE  F
Sbjct: 518  GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTF 577

Query: 139  SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
            + LL+   K+G +D+A ++ E+M   N   +  T+ +L+ GF +K ++  AL +   M +
Sbjct: 578  NALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLE 637

Query: 199  SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILSKLITSCSDEGELT 257
             G   D   Y  ++ GL    Q++ A  ++ E+    G+  D    + L+      G + 
Sbjct: 638  KGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVN 697

Query: 258  LLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG--EP-------- 304
              +K +  D    +V   +   N +M   V  G   ++  L + M++    P        
Sbjct: 698  T-IKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 756

Query: 305  --------IADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
                    + D+ V+ L  M+ +G + P+   FDI+I +  +  K+  AL LF  M  + 
Sbjct: 757  ILGLSECGLIDIAVKFLEKMVLEG-IFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLH 815

Query: 355  CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
               +   ++ +I+GL   N L++S+E+L EM + G +P H    ++    CR  ++  A 
Sbjct: 816  LSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAF 875

Query: 415  NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP------------ 462
             L  +M+  G  P     + +I+ LC+ GK  EA    ++M++ G +P            
Sbjct: 876  RLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSL 935

Query: 463  -----------------------DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
                                   D+V Y+  I GL   K +  AL+L+ ++ + G  P+V
Sbjct: 936  CKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNV 995

Query: 500  VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              Y  +   +    R+   E+L  ++  +GLIP+
Sbjct: 996  TTYITLTGAMYSTGRMQNGEELLEDIEERGLIPA 1029



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 181/421 (42%), Gaps = 47/421 (11%)

Query: 252 DEGELTL-LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVG 309
            +G+L L ++  I E   ++ +T +    +RIL+      QA ++L+ + + G     + 
Sbjct: 11  SDGKLALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAIF 70

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDG 368
             +L I     S N   F+++I   +K+ K LD A+++F                     
Sbjct: 71  TSLLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFF-------------------- 110

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                           M++ GFK +    NS+ + L    +       +R+   +     
Sbjct: 111 ----------------MDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLD 154

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALE 485
           V    +L+  LC +G+    FR   DM+Q+     L +   Y+  +   +   R   AL 
Sbjct: 155 VTTCNILLNSLCTNGE----FRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALC 210

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +  D+       D+  YNI+I  LC+ +R A A  L   M    L P   TYN LING+ 
Sbjct: 211 VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFF 270

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
             G I+ A    + ML +++  P V TYTT+IDG C   R D A+ + +EME  G  P+ 
Sbjct: 271 GEGKINHARCVFNHML-RQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSE 329

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +T+ AL+ G CK      AL     +K +G+  +  +   LI  F        A ++LK 
Sbjct: 330 LTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKS 389

Query: 666 M 666
           M
Sbjct: 390 M 390



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 203/438 (46%), Gaps = 27/438 (6%)

Query: 7    RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVK-REGLCVPN 65
            R  +I P  V+ Q +++        A   L+  L + G V+ A+ +F ++  +EGL   +
Sbjct: 621  RKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL-YAD 679

Query: 66   NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
              +YN L+    K  +V+ ++  + +M       +  +   L+  Y   GQF K+L ++ 
Sbjct: 680  CIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 739

Query: 126  EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             ++  G   ++V + +L++  S+ G +D A + +E+M    I  ++  F +LI  F +KS
Sbjct: 740  YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKS 799

Query: 185  RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++  AL+LF+ M     +  +  +  +I GL +   L+ + ++  EM   G+ P+     
Sbjct: 800  KMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYI 859

Query: 245  KLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY--------- 293
             L+ +    GE+     +KE  +   +    +  +SI+R L   G +++A          
Sbjct: 860  ALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRS 919

Query: 294  ----------NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                       L+ ++ K   IAD      ++    +  +  S++++I  L KD  +  A
Sbjct: 920  GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDA 979

Query: 344  LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            L L+ EM   G   NV  Y  L   + ++ R++   ELL ++EE G  P    L ++ R 
Sbjct: 980  LDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQLENLER- 1038

Query: 404  LCRRQDVVGALNLVRKMR 421
              R +D +  LN++R+ R
Sbjct: 1039 --RMEDAIRRLNMIRRCR 1054


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 242/517 (46%), Gaps = 53/517 (10%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +E   +I L    + GE+++  + +ERM       +      LI GF +  +  KA ++ 
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + +  SG   D   Y+V+IGG CK+ +++ AL++   M    + PD              
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPD-------------- 207

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                               +  N+I+R L  +G + +A  +L   ++ E          
Sbjct: 208 -------------------VVTYNTILRSLCDSGKLKEAMEVLDRQLQRE---------- 238

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P+  ++ I+I     D  +  A+ L  EM + GC  +V  YN LI+G+C   
Sbjct: 239 ------CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+E+ + L  M   G KP   T N + R +C     + A  L+  M  +G  P V    
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI  LC+      A   L  M + G +P+ + Y+  + G    K++D A+E    + + 
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PD+V YN +++ LCK  +V  A ++ N++ +KG  P + TYN +I+G  K G  + A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L  M  ++   PD+ITY+TL+ GL   G+ D+AI ++++ME     P+ +T+ A++ 
Sbjct: 473 VELLEEM-RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIML 531

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GLCK  +   A+     M EKG KP    +  LI   
Sbjct: 532 GLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 213/442 (48%), Gaps = 22/442 (4%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T L++ +C SG+  KA  +   + + G V D   +++L+  + K GE+DKA E++ERM  
Sbjct: 145 TSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM-- 202

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            ++  +  T+  ++       ++ +A+++ D+  +     D   Y ++I   C +  +  
Sbjct: 203 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ 261

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           A++L  EM+  G  PD    + LI     EG L   +K +            +  N I+R
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            + S G    A  LL  M++               KG  SP+  +F+I+IN L +   L 
Sbjct: 322 SMCSTGRWMDAERLLSDMLR---------------KG-CSPSVVTFNILINFLCRKRLLG 365

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +  +M + GC+ N   YN L+ G C   +++ + E L  M   G  P   T N++ 
Sbjct: 366 RAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 425

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   V  A+ ++ ++  +G  P +     +I  L K GK   A   L +M ++G  
Sbjct: 426 TALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLK 485

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDI+ YS  + GL    +VD A+++F D+      P  V YN I+ GLCKAQ+ + A D 
Sbjct: 486 PDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDF 545

Query: 522 FNEMITKGLIPSVATYNLLING 543
              M+ KG  P+ ATY +LI G
Sbjct: 546 LAYMVEKGCKPTEATYTILIEG 567



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 23/409 (5%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADV------------------GVEMLMIFKG 318
           N  +R LV NG +++    L+ MI    I DV                     ++ I + 
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 319 TVS-PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           + + P+  +++++I    K G++D AL +   M+      +V  YN ++  LC+S +L+E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKE 226

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + E+L    +    P   T   +    C    V  A+ L+ +MR +G +P V    +LI 
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            +CK G+  EA +FL +M   G  P+++ ++  +  +    R   A  L  D+   GC P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VV +NI+I+ LC+ + +  A D+  +M   G +P+  +YN L++G+C+   +D+A+  L
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M+ +    PD++TY TL+  LC  G+ D A+ + N++  KGC+P  IT+  +I GL K
Sbjct: 407 EIMVSR-GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   A+     M+ KG+KPD+  +  L+     E     A ++  +M
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 24/381 (6%)

Query: 22  VKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFD-QVKREGLCVPNNYSYNCLLEALCK 78
           V  R  ++P  + +  ++R L   G ++EA  + D Q++RE  C P+  +Y  L+EA C 
Sbjct: 198 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE--CYPDVITYTILIEATCN 255

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
              V      L EM+  G   D  T   L+   C  G+ D+A+   N +  +G     + 
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            +I+L +    G    A  L+  M       +  TF +LI+   +K  + +A+ + +KM 
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G   ++  Y+ ++ G C+ K+++ A++    M   G  PD    + L+T+   +G++ 
Sbjct: 376 KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435

Query: 258 LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             V+ + +   +  + + +  N+++  L   G  + A  LL+ M +              
Sbjct: 436 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR-------------- 481

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG + P+  ++  ++  L ++GK+D A+ +F +M  +    +   YN ++ GLC + + 
Sbjct: 482 -KG-LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 539

Query: 376 EESYELLREMEESGFKPTHFT 396
             + + L  M E G KPT  T
Sbjct: 540 SRAIDFLAYMVEKGCKPTEAT 560



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+ S  R +   R+L+ D+++  C  S      LI  L    L+  A  + +++ + G
Sbjct: 320 LRSMCSTGRWMDAERLLS-DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            CVPN+ SYN LL   C+   +D     L+ M   G   D  T   LL   C  G+ D A
Sbjct: 379 -CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAA 437

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           + + N++   G     + ++ ++   +K G+ + A EL+E M    ++ +  T+  L+ G
Sbjct: 438 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRG 497

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             ++ +VD+A+++F  M        A  Y+ I+ GLCK +Q   A+   + M   G  P 
Sbjct: 498 LGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557

Query: 240 FEILSKLITSCSD 252
               + LI   +D
Sbjct: 558 EATYTILIEGIAD 570


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 169/610 (27%), Positives = 276/610 (45%), Gaps = 34/610 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            E+A  +FD++ R G    + Y  NC L  + +      V  R   M   G       +T
Sbjct: 35  AEDARHVFDELLRRGRGA-SIYGLNCALADVARHSPAAAVS-RYNRMARAGAD----EVT 88

Query: 106 PLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
           P L  Y       C +G+ D   +    +I  G+ VD   F+ LL           A ++
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 158 I-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGG 214
           +  RM       N  ++ +L+ G   ++R  +AL+L   M   G     D   Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K   L+ A   Y EM   GI P+    + +I +         L K    D+ +  +T 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA---------LCKAQAMDKAMEVLTS 259

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M    +  SI   Y        G+P   +G    M   G V P+  +++ +++ 
Sbjct: 260 MVKNGVMPNCRTYNSIVHGY-----CSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDY 313

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+  + +     ++  V  A+ +  KMR QG  P       +I  LCK G+  +A R+  
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ E   P  + Y++ I  L    + D A EL  ++   G C D + +N II   CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P++ TY+ LI+G+C +G +D+A   L+ M+      PD +TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTY 552

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 613 SGTQLELSTY 622



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 265/563 (47%), Gaps = 44/563 (7%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFD 118
           C+PN +SYN LL+ LC ++ S + +E+ L+ M D G     D  + T ++  +   G  D
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD 216

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA   ++E++D G +   V ++ ++ A  K   +DKA E++  M    +  N +T+  ++
Sbjct: 217 KAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV 276

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 277 HGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLK 336

Query: 238 PDFEILSKLITSCSDEGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           P+      L+   + +G L        L+V+            L+C          G +D
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC-----AYAKQGKVD 391

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA  +   M                 +  ++P+T ++  +I  L K G+++ A+  F +M
Sbjct: 392 QAMLVFSKM----------------RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                     +YN+LI  LC  ++ +++ EL+ EM + G        NS+    C+   V
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + +  L   M   G +P +   + LI   C  GK  EA + L  MV  G  PD V Y+  
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I R++ AL LFR++ + G  PD++ YNII+ GL + +R A A++L+  +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 531 IPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              ++TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGR 669

Query: 586 PDDAIMLWNEMEEKGCAPNRITF 608
            D+A  L+  +   G  P+  T+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTY 692



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 214/488 (43%), Gaps = 30/488 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI       R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 231 MKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRI 282
           M   G  P+   + IL K +   +   E   L++ + +D      DV + T + N   + 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK- 211

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D+AY     M+      D G+           PN  +++ II  L K   +D 
Sbjct: 212 ---EGDLDKAYGTYHEML------DRGI----------LPNVVTYNSIIAALCKAQAMDK 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+  
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  +   M  +G +P +     L++     G  +E    L  MV+ G  P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +S  I       +VD A+ +F  +   G  PD V Y  +I  LCK+ RV +A   F
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI + L P    YN LI+  C     D+A   +  ML++     D I + ++ID  C 
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR  ++  L++ M   G  PN IT+  LI G C   +   A      M   GMKPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 643 FVALISAF 650
           +  LI+ +
Sbjct: 552 YNTLINGY 559



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C S         LK+M   G   D  T   L+   C +G+  +A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  N   F +LI  + 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   D   Y  +IG LCK+ ++E A++ + +M    ++P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 446 VYNSLIHS--------LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          PN  ++  +I+     GK+D A  L   M 
Sbjct: 498 SEKLFDLMVR------IGVK----------PNIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R+E++  L REME SG  P   T N + + L + +   
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   L  + EK 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P++  Y   IG      R+DL      ++  
Sbjct: 61  LADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIK 119

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
            G   D +A+  ++ GLC  +R ++A D+    +T+ G IP+V +YN+L+ G C   N  
Sbjct: 120 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDE-NRS 178

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           Q  L L +M+  + G   PDV++YTT+I+G    G  D A   ++EM ++G  PN +T+ 
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYN 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 268/563 (47%), Gaps = 29/563 (5%)

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
           +Y      +K L VF +++  G + +  +   +L +   +   +D A E+   M +C IR
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
               T+  ++  F K+ +V +ALQL  +M K G   +   Y+V++ GL  + +LE A +L
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             EM   G+         LI    ++G+L   + L +E+     V T+ +  N+IM  L 
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTL-VTYNTIMYGLC 306

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +  A  LL  M+                   + P+  S++ +I    + G +  A 
Sbjct: 307 KWGRVSDARKLLDVMVNK----------------NLMPDLVSYNTLIYGYTRLGNIGEAF 350

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            LF E+   G + +V  YN LIDGLC    L+ +  L  EM + G  P  FT   + R  
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410

Query: 405 CRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           C+  ++  A  L  +M  +G +P    + T ++ EL K G   +AF    +M+  GF PD
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEMLARGFPPD 469

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ Y+  I GL  +  +  A EL + +  +G  PD V Y  II     A  + +A  +F 
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFL 529

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM++KG+ PSV TY +LI+ +   G +  A+L    M EK    P+VITY  LI+GLC  
Sbjct: 530 EMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNVITYNALINGLCKV 588

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            + D A   + EM+ KG +PN+ T+  LI   C     + AL  ++ M ++ ++PD    
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 648

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
               SA L  LN      V++ +
Sbjct: 649 ----SALLKHLNKDYKSHVVRHL 667



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 230/507 (45%), Gaps = 22/507 (4%)

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV 137
           +  S+D+       M + G      T   +L  +C  G+  +AL +  ++   G +   V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 138 -FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +++L+   S  GE+++A ELI+ M    + ++  T+  LI G+ +K ++D+A +L ++M
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI---TSCSDE 253
              G       Y+ I+ GLCK  ++  A +L   M    + PD    + LI   T   + 
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           GE  LL  E+   R +    +  N+++  L   G +D A  L   MIK  P         
Sbjct: 347 GEAFLLFAEL-RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP--------- 396

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P+  +F I++    K G L +A  LF EM   G   + F Y   I G     
Sbjct: 397 -------DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
              +++ +  EM   GF P   T N     L +  ++  A  LV+KM   G  P     T
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I      G   +A     +M+ +G  P +V Y+  I       R+ LA+  F ++   
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 569

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+V+ YN +I+GLCK +++ +A   F EM  KG+ P+  TY +LIN  C  G+  +A
Sbjct: 570 GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEA 629

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGL 580
           +     ML++E   PD  T++ L+  L
Sbjct: 630 LRLYKDMLDREI-QPDSCTHSALLKHL 655



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 219/473 (46%), Gaps = 24/473 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+EA  L  Q+++ G C+PN+ +YN L+  L  S  ++  +  ++EM   G     YT
Sbjct: 204 GKVQEALQLLLQMQKMG-CLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYT 262

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
             PL++ YC  GQ D+A  +  E++  G V   V ++ ++    KWG V  A +L++ M 
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           + N+  +  ++  LI+G+ +   + +A  LF ++   G       Y+ +I GLC+   L+
Sbjct: 323 NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLD 382

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           +A++L  EM   G  PD    + L+      G L +  KE++++                
Sbjct: 383 VAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM-AKELFDE---------------- 425

Query: 283 LVSNGSIDQAYNLLQAMIK----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +++ G     +  +  ++     G+P    G++  M+ +G   P+  ++++ I+ L K G
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNVFIDGLHKLG 484

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A  L ++M   G + +   Y ++I     +  L ++  +  EM   G  P+  T  
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYT 544

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +      R  +  A+    +M  +G  P V     LI  LCK  K  +A++F T+M  +
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           G  P+   Y+  I    ++     AL L++D+      PD   ++ ++  L K
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 173/636 (27%), Positives = 297/636 (46%), Gaps = 67/636 (10%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   +  L + L  VG       LF  V R G   P  Y+++ ++   C+   + L E  
Sbjct: 230 SASGVAILFKLLLRVGDYGNVWKLFKDVIRRG-PQPCKYTFSGIILGFCRKGCIHLGESL 288

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           L  M  +    + +    ++   C  G+   AL+ FN +I+ G                 
Sbjct: 289 LHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG----------------- 331

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                          CN  +   TF  +I+ F K+  V +A +LFD + + GF+ +A MY
Sbjct: 332 ---------------CNPTV--VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR- 267
           + ++ G  K ++++ A  LY EM+  GI PD    + L++     G      +E   DR 
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYG------REEDGDRL 428

Query: 268 --DVNTMTLLCN-SIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             D++ + LL + S+  I VS     G +D+A   L  M++               KG +
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE---------------KG-L 472

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+  +F+ +I    + G  D A   ++ M   G   +    ++L+ GL  + RL+E+ E
Sbjct: 473 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L+ +M E G    +     +     +R DVVGA +L  +M  +G  P V   +  I  L 
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G   EA+    +M+++G +P+   Y++ I G     +++ AL+L + +   G  PD+ 
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             N+II GLCK  R+  A ++F +M   GL P + TYN LING+CK+ ++  A   ++RM
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
               S +PD+ TY   I G C + R + A+++ +E+   G  PN +T+ +++ G+C    
Sbjct: 713 YASGS-NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDIL 771

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
            RA ++  R++K     P++     L+S F  +  P
Sbjct: 772 DRAMILTARLLK-MAFVPNVVTANLLLSQFYKQGMP 806



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 261/559 (46%), Gaps = 39/559 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN ++YN ++ A C              M + G      T   ++  +C  G   +A 
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 356

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F+ + + G+    + ++ L+  + K  E+D+A  L E M    I  +  TF +L+ G 
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R +   +L   ++  G   D +++D+ + GLC   +L+ A++   +M   G++P  
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-----------CNSIMRILVSNGSI 289
              + +I + S  G          ED+      L+           C+S++  L  NG +
Sbjct: 477 IAFNSVIAAYSQAG---------LEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 527

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A  L+  MI+               KG +S N  +F ++++   K G +  A SL+ E
Sbjct: 528 QEATELIGQMIE---------------KG-LSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G   +V  ++  IDGL     +EE+Y +  EM   G  P +F  NS+    C+   
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL L + MR +G  P +    ++I  LCK G+   A     DM Q G  PDI+ Y+ 
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      +  A  L   + A G  PD+  YNI I G C ++R+  A  + +E+++ G
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           ++P+  TYN ++NG C S  +D+AM+  +R+L K +  P+V+T   L+      G P+  
Sbjct: 752 IVPNTVTYNSMLNGVC-SDILDRAMILTARLL-KMAFVPNVVTANLLLSQFYKQGMPERT 809

Query: 590 IMLWNEMEEKGCAPNRITF 608
           +M  +++ E   A + IT+
Sbjct: 810 LMWGHKLSEIPYAFDEITY 828



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 212/504 (42%), Gaps = 56/504 (11%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELT 257
           + SD ++ D ++      +    AL++   M+  G+ P      IL KL+    D G + 
Sbjct: 192 YESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVW 251

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            L K++   R         + I+      G I    +LL  M K                
Sbjct: 252 KLFKDVIR-RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH-------------- 296

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               PN  +++I+IN     G+   AL+ F  M + GC   V  +N +I+  C    + E
Sbjct: 297 --CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVE 354

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +L   ++E GF P     N++     + +++  A  L  +MR +G  P      +L+ 
Sbjct: 355 ARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVS 414

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
              K+G+  +  R L D+   G LPD   +  ++ GL    R+D A+E   D+   G  P
Sbjct: 415 GHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSP 474

Query: 498 DVVAYNIIIS-----------------------------------GLCKAQRVAEAEDLF 522
            ++A+N +I+                                   GL    R+ EA +L 
Sbjct: 475 SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELI 534

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI KGL  +   + +L++ + K G++  A      M E+    PDV+ ++  IDGL  
Sbjct: 535 GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM-ERRGIFPDVVAFSAFIDGLSK 593

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G  ++A  ++ EM  KG  PN   + +LI G CKC +   AL   ++M+ +G+ PD+F 
Sbjct: 594 QGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFT 653

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
              +I     +     A  V  +M
Sbjct: 654 TNMIIGGLCKQGRMRSAINVFMDM 677


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/550 (28%), Positives = 254/550 (46%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        V F+ LL + +K         L  +MD   I  N  T  +L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F   +RV  A  +  K+ K G   D A +  +I G+    ++  AL L+ +M G G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD                             V T   L N + ++    G+   A  LL
Sbjct: 163 RPD-----------------------------VVTYGTLINGLCKV----GNTSAAIRLL 189

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            +M++                    PN  +++ II++L KD ++  A +LF EM   G  
Sbjct: 190 GSMVQKN----------------CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++F YN+LI  LCN    +    LL EM +S   P   + N++   LC+   V  A ++
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           V KM  +G EP V   T L+   C   +  EA +    MV +G +P+++ Y+  I G   
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I+R+D A+ LF ++C     PD V Y+ +I GLC  +R+ +A  LF+EM+    IP++ T
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y +L++  CK+  + +AM  L + +E  +  PD+      IDG+C AG  + A  L++ +
Sbjct: 414 YRILLDYLCKNRYLAEAMALL-KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 472

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  P+  T+  +I GLC+      A   FR M E G   +  ++  +   FL     
Sbjct: 473 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 532

Query: 657 PLAFEVLKEM 666
             A ++L+EM
Sbjct: 533 SRAIQLLQEM 542



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 237/524 (45%), Gaps = 20/524 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K      +     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M     R +  T+  LI+G  K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +   Y+ II  LCK++Q+  A  L+SEM   GI+PD   
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + LI +  +  E   +   + E  D   M   +  N+++  L   G + +A++++  MI
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +       GVE          PN  ++  +++      ++D A+ +F  M   GCM NV 
Sbjct: 299 QR------GVE----------PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI+G C   R++++  L  EM      P   T +++   LC  + +  A+ L  +M
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                 P +    +L+  LCK+    EA   L  +      PDI   + AI G+     +
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + A +LF ++ + G  PDV  Y+I+I+GLC+   + EA  LF EM   G   +   YN +
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
             G+ ++    +A+  L  M+ +   S D  T T  +  L   G
Sbjct: 523 TRGFLRNNETSRAIQLLQEMVAR-GFSADASTMTLFVKMLSDDG 565



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 4/342 (1%)

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G +ML +    +S + + F    +  L    +D A+S F  M ++    +   +N L+  
Sbjct: 14  GTQMLSLLAHFLSLSHNRFH---SKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           +           L  +M+  G  P  +TL+ +    C    V  A +++ K+   GH+P 
Sbjct: 71  IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPD 130

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T LI+ +   GK  EA      M+ EGF PD+V Y   I GL  +     A+ L  
Sbjct: 131 TATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 190

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +    C P+V AYN II  LCK ++V EA +LF+EM+TKG+ P + TYN LI+  C   
Sbjct: 191 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 250

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                   L+ M++ +   PDV+++ T++D LC  G+  +A  + ++M ++G  PN +T+
Sbjct: 251 EWKHVATLLNEMVDSKI-MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            AL+ G C       A+  F  M  KG  P++  +  LI+ +
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 195/425 (45%), Gaps = 16/425 (3%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   + ++  C PN ++YN ++++LCK   V        EM 
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
             G   D +T   L+   CN  ++    ++ NE++D   + + V F+ ++ A  K G+V 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +++++M    +  N  T+  L+ G    S +D+A+++FD M   G   +   Y+ +I
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G CK ++++ A+ L+ EM    + PD    S LI        L   +    E       
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE------- 401

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            + C+ I  ++           LL  + K   +A+    +  I    + P+    +I I+
Sbjct: 402 MVACSQIPNLVTYRI-------LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            + + G+L+ A  LF  ++  G   +V+ Y+ +I+GLC    L+E+ +L REM+E+G   
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                N++ R   R  +   A+ L+++M  +G        TL +K L   G      + L
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574

Query: 453 TDMVQ 457
            + VQ
Sbjct: 575 REFVQ 579



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 1/187 (0%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+  F  +      P  V +N +++ + K +  +    L ++M + G+ P++ T ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LIN +C    +  A   L+++L K    PD  T+TTLI G+ + G+  +A+ L+++M  +
Sbjct: 102 LINSFCHLNRVGFAFSVLAKIL-KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P+ +T+  LI GLCK     AA+     M +K  +P++F +  +I +   +     A
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 660 FEVLKEM 666
           F +  EM
Sbjct: 221 FNLFSEM 227


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 271/574 (47%), Gaps = 38/574 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWG--YDKYT 103
           E+A  +FD++ R G  +P+ +SYN LL  LC ++ S + +E+ L  M D G     D  +
Sbjct: 34  EDARHVFDELLRRG--IPDVFSYNILLNGLCDENRSQEALEL-LHIMADDGGDCPPDVVS 90

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++  +   G  DK  S +NE++D       V ++ ++ A  K   VDKA E++  M 
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  +  T+  ++HGF    +  +A+    KM   G   D   Y+ ++  LCKN +  
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A +++  M   G+ P+      L+   + +G L  +                 + ++ +
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-----------------HGLLDL 253

Query: 283 LVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +V NG     Y    L+ A  K E + +  +    + +  ++PN  ++  +I  L K G+
Sbjct: 254 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 313

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A+  F +M   G      +YN+LI GLC  N+ E + EL+ EM + G        NS
Sbjct: 314 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 373

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+   V+ +  L   M   G +P +   + LI   C  GK  EA + L  MV  G
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD V YS  I G   I R+  AL LFR++ + G  PD++ YNII+ GL + +R A A+
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYT 574
           +L+  +   G    ++TYN++++G CK+   D A+     LCL  +        +  T+ 
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL------KLEARTFN 547

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            +ID L   GR D+A  L+      G  PN  T+
Sbjct: 548 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 581



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 223/480 (46%), Gaps = 22/480 (4%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK--GSGITPDFEILS 244
           + A  +FD++ + G   D   Y++++ GLC   + + AL+L   M   G    PD    S
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 245 KLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            +I     EG+L        E  D+ ++   +  NSI+  L    ++D+A  +L  M+K 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            V P+  +++ I++     G+   A+   ++M   G   +V  Y
Sbjct: 153 ----------------GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 196

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+L+D LC + R  E+ ++   M + G KP   T  ++ +    +  +V    L+  M  
Sbjct: 197 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 256

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     ++L+    K  K  EA    + M Q+G  P+ V Y A IG L    RV+ 
Sbjct: 257 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 316

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+  F  +   G  P  + YN +I GLC   +   AE+L  EM+ +G+  +   +N +I+
Sbjct: 317 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 376

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             CK G + ++      M+ +    PD+ITY+TLIDG C+AG+ D+A  L   M   G  
Sbjct: 377 SHCKEGRVIESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 435

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+  LI G CK  R + ALV FR M+  G+ PD+  +  ++           A E+
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 242/570 (42%), Gaps = 85/570 (14%)

Query: 118 DKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM--DDCNIRLNEKTFCV 175
           + A  VF+E++  G  D   ++ILL          +A EL+  M  D  +   +  ++  
Sbjct: 34  EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +I+GF K+  +DK    +++M     + +   Y+ II  LCK + ++ A+++ + M  SG
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD                                  +  NSI+    S+G   +A   
Sbjct: 154 VMPD---------------------------------CMTYNSIVHGFCSSGQPKEAIVF 180

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ M         GVE          P+  +++ +++ L K+G+   A  +F  MT+ G 
Sbjct: 181 LKKMRSD------GVE----------PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 224

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
              +  Y  L+ G      L E + LL  M  +G  P H+  + +     +++ V  A+ 
Sbjct: 225 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 284

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  KMR QG  P       +I  LCK G+  +A  +   M+ EG  P  + Y++ I GL 
Sbjct: 285 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 344

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              + + A EL  ++   G C + + +N II   CK  RV E+E LF+ M+  G+ P + 
Sbjct: 345 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 404

Query: 536 TYNLLINGWCKSGNIDQAM----------------------------------LCLSRML 561
           TY+ LI+G+C +G +D+A                                   L L R +
Sbjct: 405 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM 464

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E    SPD+ITY  ++ GL    R   A  L+  + + G      T+  ++ GLCK    
Sbjct: 465 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLT 524

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFL 651
             AL  F+ +    +K +   F  +I A L
Sbjct: 525 DDALRMFQNLCLMDLKLEARTFNIMIDALL 554



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 250/557 (44%), Gaps = 25/557 (4%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  +I  L     V++A  +   + + G+ +P+  +YN ++   C S      
Sbjct: 119 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV-MPDCMTYNSIVHGFCSSGQPKEA 177

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
            + LK+M+  G   D  T   L+   C +G+  +A  +F+ +   G   E   +  LL  
Sbjct: 178 IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQG 237

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           ++  G + +   L++ M    I  N   F +L+  + K+ +V++A+ +F KM + G   +
Sbjct: 238 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPN 297

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---SCSDEGELTLLVK 261
           A  Y  +IG LCK+ ++E A+  + +M   G++P   + + LI    +C+       L+ 
Sbjct: 298 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 357

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E+  DR +   T+  NSI+      G + ++  L   M++      +GV+          
Sbjct: 358 EML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR------IGVK---------- 400

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++  +I+     GK+D A  L   M  +G   +   Y+ LI+G C  +R++++  L
Sbjct: 401 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVL 460

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            REME SG  P   T N + + L + +    A  L   +   G +  +    +++  LCK
Sbjct: 461 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK 520

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +    +A R   ++       +   ++  I  L+ + R D A +LF    ++G  P+   
Sbjct: 521 NKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 580

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y ++   +     + E + LF  M   G        N ++    + G I +A   LS M+
Sbjct: 581 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS-MI 639

Query: 562 EKESGSPDVITYTTLID 578
           +++  S +  T +  ID
Sbjct: 640 DEKHFSLEASTASLFID 656



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 4/152 (2%)

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYT 574
           +A  +F+E++ +G IP V +YN+L+NG C   N  Q  L L  ++  + G   PDV++Y+
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNILLNGLCDE-NRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T+I+G    G  D     +NEM ++  +PN +T+ ++I  LCK      A+     M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+ PD   + +++  F S   P  A   LK+M
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 265/553 (47%), Gaps = 57/553 (10%)

Query: 118 DKALSVFNEIIDH----GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           D A+++F E+I      G VD   FS    A ++  + +   +  ++++   I  N  T 
Sbjct: 70  DDAIALFQEMIRSRPLPGLVD---FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
            ++I+ F +  +   A  +  K+ K G+  D   ++ +I GLC   ++  A+ L   M  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE 186

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           +G  PD                                  +  NSI+  +  +G    A+
Sbjct: 187 NGCQPDM---------------------------------VTYNSIVNGICRSGDTSLAF 213

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           ++L+ M +    ADV                 ++  II++L +DG +D A+SLF+EM   
Sbjct: 214 DMLRKMEERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETK 257

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V  YN+L+ GLC + +  +   LL++M      P   T N +     +   +  A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L ++M  +G  P +     L+   C   +  EA   L  MV+    PDIV +++ I G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              +KRVD  +++FR+I   G   + V Y+I++ G C++ ++  AE+LF EM++ G++P 
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TY +L++G C +G +++A+      L+K      ++ YTT+I+G+C  G+ +DA  L+
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +  KG  PN +T+  +I+GLCK      A +  R M+E G  P+   +  LI A L +
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 654 LNPPLAFEVLKEM 666
            +   + ++++EM
Sbjct: 557 GDLTASAKLIEEM 569



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 259/557 (46%), Gaps = 56/557 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF ++ R    +P    ++    A+ ++   +LV    K+++  G  ++ YTL  
Sbjct: 70  DDAIALFQEMIRSRP-LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  +C   +   A SV  +++  G+                 E D              
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-----------------EPDTT------------ 159

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI+G   + +V KA+ L D+M ++G   D   Y+ I+ G+C++    +A  
Sbjct: 160 -----TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRIL 283
           +  +M+   +  D    S +I S   +G +     L KE+ E + + +  +  NS++R L
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL 273

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  +    LL+ M+  E                + PN  +F+++++  +K+GKL  A
Sbjct: 274 CKAGKWNDGALLLKDMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEA 317

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L++EM   G   N+  YN L+DG C  NRL E+  +L  M  +   P   T  S+ + 
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C  + V   + + R +  +G        ++L++  C+ GK   A     +MV  G LPD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ Y   + GL D  +++ ALE+F D+        +V Y  II G+CK  +V +A +LF 
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  KG+ P+V TY ++I+G CK G++ +A + L +M E++  +P+  TY TLI      
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTLIRAHLRD 556

Query: 584 GRPDDAIMLWNEMEEKG 600
           G    +  L  EM+  G
Sbjct: 557 GDLTASAKLIEEMKSCG 573



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 34/364 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A++LF+EM +   +  +  ++     +  + +     +  +++E +G     +T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           LN M  C CR      A +++ K+   G+EP       LI  LC  GK  +A   +  MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  PD+V Y++ + G+       LA ++ R +       DV  Y+ II  LC+   + 
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------ 564
            A  LF EM TKG+  SV TYN L+ G CK+G  +   L L  M+ +E            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 565 ----------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                   SP++ITY TL+DG C+  R  +A  + + M    C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +TF +LI G C   R    +  FR + ++G+  +   +  L+  F       LA E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 663 LKEM 666
            +EM
Sbjct: 426 FQEM 429



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/546 (21%), Positives = 245/546 (44%), Gaps = 29/546 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD---QVKREGLCVPNNYSYNCLL 73
           L Q++++SR    PG + F  R   ++   ++ N++ D   Q++  G+   N Y+ N ++
Sbjct: 75  LFQEMIRSRPL--PGLVDF-SRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMI 130

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
              C+ C        L ++   G+  D  T   L+   C  G+  KA+ + + ++++G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            + V ++ ++    + G+   A +++ +M++ N++ +  T+  +I    +   +D A+ L
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F +M   G  S    Y+ ++ GLCK  +      L  +M    I P+    + L+     
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 253 EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           EG+L     E++++   R ++   +  N++M        + +A N+L  M++ +      
Sbjct: 311 EGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK------ 363

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                      SP+  +F  +I       ++D  + +FR +++ G + N   Y+ L+ G 
Sbjct: 364 ----------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C S +++ + EL +EM   G  P   T   +   LC    +  AL +   ++    +  +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              T +I+ +CK GK  +A+     +  +G  P+++ Y+  I GL     +  A  L R 
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P+   YN +I    +   +  +  L  EM + G     ++  ++I+    SG 
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGE 592

Query: 550 IDQAML 555
           +D++ L
Sbjct: 593 LDKSFL 598



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           VC+   +  G++DIK+ D A+ LF+++      P +V ++   S + + ++     D   
Sbjct: 54  VCFRERLRSGIVDIKKDD-AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           ++   G+  ++ T N++IN +C+      A   L +++ K    PD  T+ TLI+GLC+ 
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLINGLCLE 171

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+   A++L + M E GC P+ +T+ +++ G+C+      A    R M+E+ +K D+F +
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +   +     A  + KEM
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEM 254


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 178/656 (27%), Positives = 297/656 (45%), Gaps = 31/656 (4%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIR-CLGSV--GLVEEANMLFDQVKREG 60
           ++SR  R  PL V A  +  S C  +      L+R CL S   G +  A   F ++   G
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATAD---LLVRACLNSPAPGSLSRAADAFLELSARG 170

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDK 119
              P+  + + L+EAL     +D+      EM+D      D +T T +++  C +G+ D 
Sbjct: 171 -ASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDA 229

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A ++  E+   G     V +++L+ A  K G V++A  L  RM +  +R +  TF +LI 
Sbjct: 230 AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILIS 289

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  +  +  +   +  +M   G   +  +Y+ +IG  C+      AL+L+ EM   GI  
Sbjct: 290 GLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQ 349

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---NSIMRI-LVSNGSIDQAYN 294
                + +  +   EGE+    ++I ++  +  M + C   NS++   L   G +D    
Sbjct: 350 TVVTYNLIAKALCKEGEMEH-AEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLR 408

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L++             EML  F   + PN +     I  L K GK + A  ++ ++   G
Sbjct: 409 LIR-------------EMLARF---LKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV   N LI GLC  N ++E+ ++L+ M  SG +    T N M +  C+   +  A+
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L   M  +G +P +    + +   C  GK  E    L  M  EG  PDIV Y   I G 
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              K +  A E   ++  +G  P+ V YN +I G  +   +++A  + + M   G+ P+ 
Sbjct: 573 CKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTP 632

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN L+   C +G +++     ++ + K+     VI YT +I G C  G+ D+A+M + 
Sbjct: 633 VTYNSLMYWMCHAGLVEEVKAVFAQCIVKDI-ELGVIGYTIIIQGFCKIGKIDEAVMYFK 691

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           EM  +G  PN++T+  L+    K      A   F  M   G+ PD   +  LIS F
Sbjct: 692 EMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 205/452 (45%), Gaps = 23/452 (5%)

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLC 276
            L  A   + E+   G +P  +  S L+ +    G+L +  K   E RD  T+       
Sbjct: 155 SLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTY 214

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            ++++ L   G ID A+ +L  +                 +  + P   +++++++ L K
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAEL----------------RRSGIQPTVVTYNVLMDALCK 258

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+++ A  L   M +     ++  +  LI GL    +  E   +L+EM+  G  P    
Sbjct: 259 SGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVI 318

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N M    CR+     AL L  +M  +G +  V    L+ K LCK G+   A + L +M+
Sbjct: 319 YNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEML 378

Query: 457 QEGFLPDIVCYSAAIG-GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             G +     +++ +   L    R+DL L L R++ A    P+       I  LCK+ + 
Sbjct: 379 LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH 438

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYT 574
            EA +++ +++ KGL  +VAT N LI+G C+  N+ +A   L  M+   SG   D ITY 
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVN--SGVELDRITYN 496

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +I G C A + D+AI L ++M ++G  P+  TF   +   C   +    L     MK +
Sbjct: 497 IMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSE 556

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+KPD+  +  +I  +    +   A E L E+
Sbjct: 557 GLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 218/488 (44%), Gaps = 27/488 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFEILS 244
           + +A   F +++  G +       +++  L    QL++A +++ EM+ G  + PD    +
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215

Query: 245 KLITSCSDEGELTLLVKEIWEDR--DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            +I +    GE+      + E R   +    +  N +M  L  +G +++A+ L   M++G
Sbjct: 216 AMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG 275

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            V P+  +F I+I+ L +  +     ++ +EM   G   N  +Y
Sbjct: 276 R----------------VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIY 319

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I   C      E+ +L  EM   G K T  T N + + LC+  ++  A  ++ +M +
Sbjct: 320 NEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLL 379

Query: 423 QGHEPWVKH----NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            G    + H    N+++   L   G+     R + +M+     P+    +A I  L    
Sbjct: 380 AG---MMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSG 436

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           + + A E++  +   G   +V   N +I GLC+   + EA  +   M+  G+     TYN
Sbjct: 437 KHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYN 496

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I G CK+  +D+A+     M+ K    PD+ T+   +   C  G+ ++ + L ++M+ 
Sbjct: 497 IMIQGCCKASKMDEAIQLRDDMI-KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKS 555

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           +G  P+ +T+  +I G CK      A  +   + + G++P+  ++ ALI  +    N   
Sbjct: 556 EGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISD 615

Query: 659 AFEVLKEM 666
           A  +L  M
Sbjct: 616 AIGILDTM 623


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 235/492 (47%), Gaps = 50/492 (10%)

Query: 186 VDKALQLFDKMTK-SGFASDAAMYDVIIGGL----------CKNKQLEMALQ-------- 226
            ++AL+LF  +++ +  A +  +Y  II  L          C  + L   LQ        
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRIC 109

Query: 227 -----LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE---IWEDRDVNTMTLLCNS 278
                + S ++ S  TP+  +   LI + S+ G    LV+E   ++   DV      CN 
Sbjct: 110 CSVFNVLSRLESSKFTPN--VFGVLIIAFSEMG----LVEEALWVYYKMDVLPAMQACNM 163

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  LV  G  D  + +   M+                +G  SPN  ++  +I+   + G
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVA---------------RG-ASPNVVTYGTLIDGCCRQG 207

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
               A  LF EM +      V +Y  LI GLC  +R+ E+  + R M  SG  P  +T N
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +M    C+   V  AL L  +M   G  P V    +LI  LCK  + + A +FL DM   
Sbjct: 268 TMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G +P+I  Y+  I G      +  AL L  +I  H   PDV  Y+I+I GLC   R+ EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L  EM  KG +P+  TYN LI+G+CK GN+++A+   S+M EK    P++IT++TLID
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLID 446

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C AG+ + A+ L+ EM  KG  P+ + + ALI G  K    + A    + M+E G+ P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 639 DMFVFVALISAF 650
           ++F    LI   
Sbjct: 507 NVFTLSCLIDGL 518



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 252/553 (45%), Gaps = 51/553 (9%)

Query: 122 SVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD------DCNIRLNEKTF 173
           SVFN +  ++      +VF +L++AFS+ G V++A  +  +MD       CN+ L+    
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLD---- 166

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
                G VKK R D   +++  M   G + +   Y  +I G C+      A +L+ EM  
Sbjct: 167 -----GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
             I P   I + LI     E  ++                    S+ R + ++G +   Y
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISE-----------------AESMFRTMRNSGMLPNLY 264

Query: 294 NLLQAMIKGEPIADV--GVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                M     IA V   +E+     G  + PN  +F I+I+ L K  ++  A     +M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + N+F+YN LIDG C +  L E+  L  E+E+    P  FT + + + LC    +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 411 VGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             A  L+++M+ +G  P  V +NT LI   CK G   +A    + M ++G  P+I+ +S 
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNT-LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G     +++ A+ L+ ++   G  PDVVAY  +I G  K     EA  L  EM   G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 530 LIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEKESG-----------SPDVITYTTLI 577
           L P+V T + LI+G CK G I  A+ L L++     +G           SP+ + YT LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GLC  GR   A   +++M   G  P+  T + +I G  +    R  ++    + + G+ 
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 638 PDMFVFVALISAF 650
           P+  V+  L   +
Sbjct: 624 PNSSVYRVLAKGY 636



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 175/351 (49%), Gaps = 1/351 (0%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           +K  V P   + +++++ L+K G+ D    ++ +M   G   NV  Y  LIDG C     
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +++ L  EM E    PT      + R LC    +  A ++ R MR  G  P +     +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   CK     +A     +M+ +G LP++V +   I GL     +  A +   D+ + G 
Sbjct: 270 MDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++  YN +I G CKA  ++EA  L +E+    ++P V TY++LI G C    +++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M +K+   P+ +TY TLIDG C  G  + AI + ++M EKG  PN ITF  LI G 
Sbjct: 390 LLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  +  AA+  +  M  KG+ PD+  + ALI     + N   AF + KEM
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 165/693 (23%), Positives = 276/693 (39%), Gaps = 131/693 (18%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P   G LI     +GLVEEA  ++ ++      +P   + N +L+ L K    D +   
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMD----VLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
             +M   G   +  T   L+   C  G F KA  +F+E+I+     + +F  +++     
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-----KKIFPTVVI----- 230

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                                   + +LI G   +SR+ +A  +F  M  SG   +   Y
Sbjct: 231 ------------------------YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + ++ G CK   ++ AL+LY EM G G+ P+      LI       E+    K +    D
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLI---D 323

Query: 269 VNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           + +  ++ N    I V N  ID   +A NL +A+     I           K  + P+  
Sbjct: 324 MASFGVVPN----IFVYNCLIDGYCKAGNLSEALSLHSEIE----------KHEILPDVF 369

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++ I+I  L    +++ A  L +EM + G + N   YN LIDG C    +E++ E+  +M
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G +P   T +++    C+   +  A+ L  +M ++G  P V   T LI    K G  
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-------------RDICA 492
            EAFR   +M + G  P++   S  I GL    R+  A++LF              ++  
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDR 549

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------------------- 525
             C P+ V Y  +I GLC   R+ +A   F++M                           
Sbjct: 550 SLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 526 --------ITKGLIPSVATYNLLINGWCKSGNIDQAM-LC------LSRMLEKESGSPDV 570
                   +  G+IP+ + Y +L  G+ +SG +  A+  C      L R+  +  GS  +
Sbjct: 610 VMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTI 669

Query: 571 ITYTTLIDGLCIAGRPDDA-------------IMLWN-EMEEKGCAPNRITFMALITGLC 616
            +       LC+     +              ++LW      K  +P+ I       G  
Sbjct: 670 RSRFQ----LCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQK 725

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
              RP  AL  FR M+    +PD+      +SA
Sbjct: 726 GDQRPNKALQLFRQMQMDDXQPDIVTVTVALSA 758



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 278/650 (42%), Gaps = 61/650 (9%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +  V++A  L+ ++  +GL +PN  ++  L++ LCK+  +      L +M  +G   + +
Sbjct: 276 IAHVKKALELYXEMLGDGL-LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
               L+  YC +G   +ALS+ +EI  H  + D   +SIL+        +++A  L++ M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                  N  T+  LI G+ K+  ++KA+++  +MT+ G   +   +  +I G CK  ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE-DRDVNTMTLLCN 277
           E A+ LY+EM   G+ PD    + LI     +G   E   L KE+ E     N  TL C 
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC- 513

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++  L  +G I  A  L  A    +     G +   + +   SPN   +  +I  L  D
Sbjct: 514 -LIDGLCKDGRISDAIKLFLAKTGTD---TTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++  A   F +M   G   +VF    +I G   +  L +   L  ++ + G  P     
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN---- 625

Query: 398 NSMFRCLCRRQDVVGALNL--------VRKMRVQGHEPWVKHNTLLIKELCK-------H 442
           +S++R L +  +  G L          V+ +     EPW  +      +LC        H
Sbjct: 626 SSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECH 685

Query: 443 GKAMEAFR--------FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
              + AF         +   +++     +I+     IG   D +R + AL+LFR +    
Sbjct: 686 SSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGD-QRPNKALQLFRQMQMDD 744

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD+V   + +S       +   E +   +  +GL   +   N LIN + K G I  A 
Sbjct: 745 XQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA- 803

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG-------------- 600
               R L   +   DV T+T++I G  + G+ ++A+ L+ EM+E                
Sbjct: 804 ----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXES 859

Query: 601 --CAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-GMKPDMFVFVALI 647
               PN +TFM ++              HFR MKE   ++P +  F  ++
Sbjct: 860 SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 909



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 78/386 (20%), Positives = 145/386 (37%), Gaps = 69/386 (17%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LC PN+  Y  L++ LC    +        +M+  G   D +T   ++Q +  +      
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDV 610

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKAC----ELIERMDDCN--------IR 167
           + +  +I+  G + +  V+ +L   + + G +  A     E ++ +D  N        IR
Sbjct: 611 MMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIR 670

Query: 168 -------LNEKTFC-------VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
                  + EK  C         IH FV        L  F  + K   +    +  V   
Sbjct: 671 SRFQLCVVTEKKECHSSYLTAFGIHSFV-------LLWYFHTILKPP-SPHEILKKVPFI 722

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVKEIWEDRDVNT 271
           G   +++   ALQL+ +M+     PD   ++  +++C+D G L +   +      R ++T
Sbjct: 723 GQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT 782

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQ-----------AMIKGEPIADVGVEMLMIF---- 316
              L NS++ +    G I  A  L             +MI G  +     E L +F    
Sbjct: 783 DLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 317 ----------------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NV 359
                              V PN  +F  ++      G ++     FR M +   ++  +
Sbjct: 843 ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI 902

Query: 360 FLYNNLIDGLCNSNRLEESYELLREM 385
             +  ++D LC +  L E+YE + +M
Sbjct: 903 SHFGCMVDLLCRAGLLTEAYEFILKM 928


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 289/628 (46%), Gaps = 45/628 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YNCL++A  K+  +D   +  +EM       D +TL       C  G++ +AL++
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +    +V + VF   L++   +    ++A + + RM   +   N  T+  L+ G + 
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++ + M   G      +++ ++   C +     A +L  +M   G  P + +
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368

Query: 243 LSKLITS-CSDEGELTLLVKEIWEDRDVNTMT-------LLCNSIMRILVSNGSIDQAYN 294
            + LI S C D+  L   + ++ E      +        +  +S  R L S G  ++A++
Sbjct: 369 YNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 428

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +++ MI                +G + P+TS++  ++N L    K++LA  LF EM + G
Sbjct: 429 VIREMIG---------------QGFI-PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 472

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  ++D  C +  +E++ +   EM E G  P   T  ++     + + V  A 
Sbjct: 473 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 532

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI---------- 464
            L   M  +G  P +   + LI   CK G+  +A +    M     +PD+          
Sbjct: 533 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 592

Query: 465 ------VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                 V Y A + G     RV+ A +L   +   GC P+ + Y+ +I GLCK  ++ EA
Sbjct: 593 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 652

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++  EM   G   ++ TY+ LI+ + K    D A   LS+MLE  S +P+V+ YT +ID
Sbjct: 653 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMID 711

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  G+ D+A  L   MEEKGC PN +T+ A+I G     +    L     M  KG+ P
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  LI          +A  +L+EM
Sbjct: 772 NYVTYRVLIDHCCKNGALDVAHNLLEEM 799



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 280/642 (43%), Gaps = 80/642 (12%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L++ + +     + E  L++++D         L  L++ +C +G F  AL     + 
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLK 186

Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D  +      ++ L+ AF K   +D A  +   M   N+R++  T     +   K  +  
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 246

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL L +      F  D   Y  +I GLC+    E A+   + M+ +   P+    S L+
Sbjct: 247 EALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL--------LCNSIMRILVSNGSIDQAYNLLQAM 299
             C ++ +L          R +N M +        + NS++    ++G    AY LL+ M
Sbjct: 304 CGCLNKKQLGRC------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 357

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K   +    V  ++I       ++ +FD+          LDLA   + EM   G + N 
Sbjct: 358 VKCGHMPGYVVYNILIGSICGDKDSLNFDL----------LDLAEKAYSEMLAAGVVLNK 407

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              ++    LC++ + E+++ ++REM   GF P   T + +   LC    +  A  L  +
Sbjct: 408 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+  G    V   T+++   CK G   +A ++  +M + G  P++V Y+A I   +  K+
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-------- 531
           V  A ELF  + + GC P++V Y+ +I G CKA +V +A  +F  M     +        
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587

Query: 532 --------PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                   P+V TY  L++G+CKS  +++A   L  M   E   P+ I Y  LIDGLC  
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKV 646

Query: 584 GRPDDAIMLWNEMEEKG-----------------------------------CAPNRITF 608
           G+ D+A  +  EM E G                                   CAPN + +
Sbjct: 647 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 706

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +I GLCK  +   A    +MM+EKG +P++  + A+I  F
Sbjct: 707 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 289/650 (44%), Gaps = 91/650 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS---- 81
           C+ SP     L+    + G    A  L  ++ + G  +P    YN L+ ++C        
Sbjct: 327 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNF 385

Query: 82  --VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
             +DL E    EM   G   +K  ++   +  C++G+++KA SV  E+I  G++ D   +
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S +L       +++ A  L E M    +  +  T+ +++  F K   +++A + F++M +
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   +   Y  +I    K K++  A +L+  M   G  P+    S LI     +G    
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI-----DGH--- 557

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                            C +        G +++A  + + M   + + DV +        
Sbjct: 558 -----------------CKA--------GQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 592

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           +  PN  ++  +++   K  +++ A  L   M+  GC  N  +Y+ LIDGLC   +L+E+
Sbjct: 593 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 652

Query: 379 YELLREMEESGFKPTHFTLNSM----FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E+  EM E GF  T +T +S+    F+   +RQD+  A  ++ KM      P V   T 
Sbjct: 653 QEVKTEMSEHGFPATLYTYSSLIDRYFKV--KRQDL--ASKVLSKMLENSCAPNVVIYTE 708

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK GK  EA++ +  M ++G  P++V Y+A I G   I +++  LEL   + + G
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------ITKGL---------- 530
             P+ V Y ++I   CK   +  A +L  EM              + +G           
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 828

Query: 531 ---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI-----TYTTL 576
                     P ++ Y LLI+   K+  ++ A+    R+LE+ +     +     TY +L
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL----RLLEEVATFSATLVDYSSTYNSL 884

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           I+ LC+A + + A  L++EM +KG  P   +F +LI GL +  +   AL+
Sbjct: 885 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 934



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 234/532 (43%), Gaps = 73/532 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E A +LF+++KR GL V + Y+Y  ++++ CK+  ++       EM++ G   +  T T
Sbjct: 458 MELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 516

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V +S L+    K G+V+KAC++ ERM   
Sbjct: 517 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 576

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        DD + R N  T+  L+ GF K  RV++A +L D M+  G   +  +Y
Sbjct: 577 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 636

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           D +I GLCK  +L+ A ++ +EM   G        S LI                  DR 
Sbjct: 637 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI------------------DRY 678

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                D A  +L  M++                 + +PN   + 
Sbjct: 679 FKVKRQ---------------DLASKVLSKMLEN----------------SCAPNVVIYT 707

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+ L K GK D A  L + M + GC  NV  Y  +IDG     ++E   ELL  M   
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-ME 447
           G  P + T   +    C+   +  A NL+ +M+ Q H  W  H     K +    K  +E
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH--WPTHTAGYRKVIEGFNKEFIE 824

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNII 505
           +   L ++ Q+   P +  Y   I  LI  +R+++AL L  ++             YN +
Sbjct: 825 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 884

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           I  LC A +V  A  LF+EM  KG+IP + ++  LI G  ++  I +A+L L
Sbjct: 885 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 237/606 (39%), Gaps = 76/606 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L    L EEA M F    R   C+PN  +Y+ LL        +   +  L  M   
Sbjct: 267 LISGLCEASLFEEA-MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 325

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGE----- 150
           G          L+  YC SG    A  +  +++  G +  +V   +L+  S  G+     
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG-SICGDKDSLN 384

Query: 151 ---VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
              +D A +    M    + LN+              + +KA  +  +M   GF  D + 
Sbjct: 385 FDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 444

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++  LC   ++E+A  L+ EMK  G+  D    + ++ S    G +    K   E R
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 504

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V      C   +    +         L+ A +K + ++        +      PN  ++
Sbjct: 505 EVG-----CTPNVVTYTA---------LIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 550

Query: 328 DIIINTLLKDGKLDLALSLFREM----------------TQIGCMQNVFLYNNLIDGLCN 371
             +I+   K G+++ A  +F  M                       NV  Y  L+DG C 
Sbjct: 551 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 610

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           S+R+EE+ +LL  M   G +P     ++                                
Sbjct: 611 SHRVEEARKLLDAMSMEGCEPNQIVYDA-------------------------------- 638

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI  LCK GK  EA    T+M + GF   +  YS+ I     +KR DLA ++   + 
Sbjct: 639 ---LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            + C P+VV Y  +I GLCK  +  EA  L   M  KG  P+V TY  +I+G+   G I+
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 755

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             +  L RM  K   +P+ +TY  LID  C  G  D A  L  EM++     +   +  +
Sbjct: 756 TCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814

Query: 612 ITGLCK 617
           I G  K
Sbjct: 815 IEGFNK 820



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 142/358 (39%), Gaps = 49/358 (13%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           QIG      +YN L+D +   +  +   E L+++ +   +     LN + R  CR     
Sbjct: 117 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFS 176

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIK---------------------------------- 437
            AL  + +++     P       LI+                                  
Sbjct: 177 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 236

Query: 438 -ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK  EA   LT +  E F+PD V Y+  I GL +    + A++    + A  C 
Sbjct: 237 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 293

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y+ ++ G    +++   + + N M+ +G  PS   +N L++ +C SG+   A   
Sbjct: 294 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 353

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD--------AIMLWNEMEEKGCAPNRITF 608
           L +M+ K    P  + Y  LI  +C  G  D         A   ++EM   G   N+I  
Sbjct: 354 LKKMV-KCGHMPGYVVYNILIGSIC--GDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINV 410

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    LC   +   A    R M  +G  PD   +  +++   +     LAF + +EM
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 255/568 (44%), Gaps = 59/568 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++ A       D+A ++  RM    +  + +T  V I  F    R   AL+L   + 
Sbjct: 13  YNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLP 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL- 256
           + G       Y  ++ GL  +     A  L+ EM    + PD    + ++ +   +G++ 
Sbjct: 73  ERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIM 132

Query: 257 ---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
               LL K +     VN  T  CN  +R L   G +++A  L+++M              
Sbjct: 133 ESGALLAKVLKRGMSVNKFT--CNIWIRGLCEGGRLEEAVALVESM-------------- 176

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                 ++P+  +++ ++  L KD K+  A    R M   GC+ + F YN +IDG C  +
Sbjct: 177 ---DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233

Query: 374 RLEESYELLREMEESGFKPTHFT-----------------------------------LN 398
            L+E+ ELL++    GF P   T                                    N
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+ + LCR+  ++ AL ++ +M   G  P +    ++I  LCK G   +A   + D + +
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G+LPD+  ++  I G     ++D AL+L   +  +G  PD + YN +++GLCKA +  E 
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEV 413

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            + F EMI KG  P+  TYN+LI  +CK   +++A   + RM  ++   PD I++ TLI 
Sbjct: 414 NETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM-SQDGLVPDTISFNTLIH 472

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  G  D A +L+ +++EKG +    TF  LI         + A   F  M  KG KP
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D++ +  L+       N   A+  L EM
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEM 560



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/596 (23%), Positives = 265/596 (44%), Gaps = 52/596 (8%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
            R    LR+L + + +  C + P A   ++R L + G   +A  LFD++ R  +  P+  
Sbjct: 59  GRPHVALRLL-RSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDV-FPDVA 116

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N +L ALC+   +      L ++   G   +K+T    ++  C  G+ ++A+++   +
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             +   D   ++ L+    K  +V +A + + RM +     ++ T+  +I G+ K+  + 
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A +L       GF  D   Y  +I GLC    +E AL+L++E +   + PD  +     
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY---- 292

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                                        NS+++ L   G I  A  ++  M++      
Sbjct: 293 -----------------------------NSLVKGLCRQGLILHALQVMNEMVED----- 318

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                         P+  +++I+IN L K G +  A  +  +    G + +VF +N +ID
Sbjct: 319 -----------GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMID 367

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C   +L+ + +L+  M   G  P   T NS+   LC+            +M ++G  P
Sbjct: 368 GYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 427

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                 +LI+  CK  +  EA   +  M Q+G +PD + ++  I G      +D A  LF
Sbjct: 428 NAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLF 487

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + +   G       +NI+I        +  AE +F EMI+KG  P + TY +L++G CK+
Sbjct: 488 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKA 547

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            N+D+A + L+ M+ K    P + T+  +++ L +  R  +A+ + + M   G  P
Sbjct: 548 ANVDRAYVHLAEMVSK-GFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 147/336 (43%), Gaps = 37/336 (11%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   GC      YN ++D L N+   ++++++   M  +G  P   T     +  C    
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              AL L+R +  +G +        +++ L  HG   +A     +M++    PD+  ++ 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 470 A-----------------------------------IGGLIDIKRVDLALELFRDICAHG 494
                                               I GL +  R++ A+ L   + A+ 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVV YN ++ GLCK  +V EA      M+ +G IP   TYN +I+G+CK   + +A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L   + K    PD +TY +LI+GLC  G  + A+ L+NE + K   P+ + + +L+ G
Sbjct: 240 ELLKDAIFK-GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LC+      AL     M E G  PD++ +  +I+  
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 68/275 (24%)

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV------------------- 499
           G  P    Y+A +  L++    D A +++  + + G  PD                    
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 500 ----------------VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
                           +AY  ++ GL       +A  LF+EM+ + + P VAT+N +++ 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 544 WCKSGNIDQAMLCLSRMLEK-----------------ESG----------------SPDV 570
            C+ G+I ++   L+++L++                 E G                +PDV
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY TL+ GLC   +  +A      M  +GC P+  T+  +I G CK D  + A    + 
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
              KG  PD   + +LI+   +E +   A E+  E
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 169/610 (27%), Positives = 274/610 (44%), Gaps = 34/610 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            E+A  +FD++ R G    + Y  NC L  + +      V  R   M   G       +T
Sbjct: 35  AEDARHVFDELLRRGRGA-SIYGLNCALADVARHSPAAAVS-RYNRMARAGAD----EVT 88

Query: 106 PLLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
           P L  Y       C +G+ D   +    +I  G+ VD   F+ +L           A ++
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 158 I-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--ASDAAMYDVIIGG 214
           +  RM       N  ++ +L+ G    +R  +AL+L   M   G     D   Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K   L+ A   Y EM   GI P+    S +I +         L K    D+ +  +T 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA---------LCKAQAMDKAMEVLTS 259

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N +M    +  SI   Y        G+P   +G    M   G V P+  +++ +++ 
Sbjct: 260 MVKNGVMPNCRTYNSIVHGY-----CSSGQPKEAIGFLKKMHSDG-VEPDVVTYNSLMDY 313

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G    +  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+  + +     ++  V  A+ +  KMR QG  P       +I  LCK G+  +A R+  
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ E   P  + Y++ I  L    + D A EL  ++   G C D + +N II   CK  
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P + TY+ LI+G+C +G +D+A   L+ M+      PD +TY
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTY 552

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI+G C   R +DA++L+ EME  G +P+ IT+  ++ GL +  R  AA   +  + E
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 634 KGMKPDMFVF 643
            G + ++  +
Sbjct: 613 SGTQLELSTY 622



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 258/562 (45%), Gaps = 42/562 (7%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFDK 119
           C+PN +SYN LL+ LC           L+ M D G     D  + T ++  +   G  DK
Sbjct: 158 CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A   ++E++D G +   V +S ++ A  K   +DKA E++  M    +  N +T+  ++H
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 239 DFEILSKLITSCSDEGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           +      L+   + +G L        L+V+            L+C          G +DQ
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC-----AYAKQGKVDQ 392

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  +   M                 +  ++P+T ++  +I  L K G+++ A+  F +M 
Sbjct: 393 AMLVFSKM----------------RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
                    +YN+LI  LC  ++ +++ EL+ EM + G        NS+    C+   V+
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            +  L   M   G +P +   + LI   C  GK  EA + L  MV  G  PD V Y+  I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   I R++ AL LFR++ + G  PD++ YNII+ GL + +R A A++L+  +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 532 PSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             ++TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR 
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGRN 670

Query: 587 DDAIMLWNEMEEKGCAPNRITF 608
           D+A  L+  +   G  P+  T+
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 213/488 (43%), Gaps = 30/488 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +L+       R+D        + K GF  DA  +  ++ GLC +K+   A+ +    
Sbjct: 93  TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152

Query: 231 MKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRI 282
           M   G  P+   + IL K +   +   E   L++ + +D      DV + T + N   + 
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK- 211

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +D+AY     M+      D G+           PN  ++  II  L K   +D 
Sbjct: 212 ---EGDLDKAYGTYHEML------DRGI----------LPNVVTYSSIIAALCKAQAMDK 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+  
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  +   M  +G +P +     L++     G  +E    L  MV+ G  P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +S  I       +VD A+ +F  +   G  PD V Y  +I  LCK+ RV +A   F
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI + L P    YN LI+  C     D+A   +  ML++     D I + ++ID  C 
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR  ++  L++ M   G  P+ IT+  LI G C   +   A      M   GMKPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 643 FVALISAF 650
           +  LI+ +
Sbjct: 552 YNTLINGY 559



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C S         LK+M   G   D  T   L+   C +G+  +A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   E   +  LL  ++  G + +   L++ M    I  N   F +LI  + 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   D   Y  +IG LCK+ ++E A++ + +M    ++P   
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 446 VYNSLIHS--------LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          P+  ++  +I+     GK+D A  L   M 
Sbjct: 498 SEKLFDLMVR------IGVK----------PDIITYSTLIDGYCLAGKMDEATKLLASMV 541

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R+E++  L REME SG  P   T N + + L + +   
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 721

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   L  + EK 
Sbjct: 722 ANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P++  Y   +G      R+DL      ++  
Sbjct: 61  LADVARHSPAAAVSRY-NRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIK 119

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNID 551
            G   D +A+  ++ GLC  +R ++A D+    +T+ G IP+V +YN+L+ G C   N  
Sbjct: 120 KGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDD-NRS 178

Query: 552 QAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           Q  L L +M+  + G   PDV++YTT+I+G    G  D A   ++EM ++G  PN +T+ 
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 192/347 (55%), Gaps = 1/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+ N  S +++IN L +   +D A+S+  +M ++G   +   +N LI+GLCN  +++E+ 
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            L  EM  SG +P   + N++   LC+  + + A+ + RKM     +P V     +I  L
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     EA  FL++MV  G  PD+V Y+  + G   + +++ A  LF+++      PD 
Sbjct: 247 CKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V +NI++ GLCK   V+EA  +   M  KG  P+  TYN L++G+C    +D+A+  L  
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGI 366

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+ K   +P++ +Y  LI+G C + R ++A  L +EM EK   P+ +T+  L+ GLC+  
Sbjct: 367 MIGK-GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           RPR AL  F+ M   G+ PD+  +  L+  F    +   A ++LKEM
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 245/520 (47%), Gaps = 23/520 (4%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A     RM   N R +   F   +    KK +   A+ L ++M   G   +    +V
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWED 266
           +I  LC+   ++ A+ +  +M   GI PD    + LI    +EG++     L  + +W  
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            + N ++   N+++  L  NG+   A  + + M +                    PN  +
Sbjct: 197 HEPNVISY--NTVINGLCKNGNTIMAVRVFRKMEQNRG----------------KPNVVT 238

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ II++L KD  ++ A+    EM   G   +V  YN ++ G C+  +L E+  L +EM 
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                P   T N +   LC+   V  A  +   M  +G EP       L+   C H +  
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA + L  M+ +G  P++  Y+  I G    KR++ A  L  ++      PD V Y+ ++
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GLC+  R  EA +LF EM + GL+P +  Y++L++G+CK G++D+A+  L  M E+   
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI- 477

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P++I YT LI G+ IAG+ + A  L++++   G  P+  T+  +I GL K      A  
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            FR M++ G  PD   +  +I  FL   +   A +++ EM
Sbjct: 538 FFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 253/540 (46%), Gaps = 24/540 (4%)

Query: 113 NSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D AL+ F  ++        V F   L + +K  +   A  L  +MD   +  N  
Sbjct: 73  NDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVY 132

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +  VLI+   + S VD A+ +  KM K G   DA  ++ +I GLC   +++ A+ L++EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVK---EIWEDR-DVNTMTLLCNSIMRILVSNG 287
             SG  P+    + +I      G   + V+   ++ ++R   N +T   N+I+  L  + 
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY--NTIIDSLCKDR 250

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +++A   L  M+      D G+           P+  +++ I++     G+L+ A  LF
Sbjct: 251 LVNEAVEFLSEMV------DRGI----------PPDVVTYNTILHGFCSLGQLNEATRLF 294

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +EM     M +   +N L+DGLC    + E+  +   M E G +P  +T N++    C  
Sbjct: 295 KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLH 354

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A+ ++  M  +G  P +    +LI   CK  +  EA R L++M ++   PD V Y
Sbjct: 355 NQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTY 414

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  + GL  + R   AL LF+++C+ G  PD++AY+I++ G CK   + EA  L  EM  
Sbjct: 415 STLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHE 474

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           + + P++  Y +LI G   +G ++ A    S+ L  +   PD+ TY  +I GL   G  D
Sbjct: 475 RRIKPNIILYTILIRGMFIAGKLEVAKELFSK-LSADGIRPDIWTYNVMIKGLLKEGLSD 533

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A   + +ME+ G  P+  ++  +I G  +      A+     M  K    D   F  L+
Sbjct: 534 EAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 241/491 (49%), Gaps = 35/491 (7%)

Query: 116 QFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           Q+  A+S+ N++ D   V  +V+S  +L+    +   VD A  ++ +M    I+ +  TF
Sbjct: 111 QYSSAVSLCNQM-DLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITF 169

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI+G   + ++ +A+ LF++M  SG   +   Y+ +I GLCKN    MA++++ +M+ 
Sbjct: 170 NTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQ 229

Query: 234 SGITPDFEILSKLITS-CSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSN 286
           +   P+    + +I S C D      LV E  E      DR +    +  N+I+    S 
Sbjct: 230 NRGKPNVVTYNTIIDSLCKDR-----LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL 284

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMI----FKGTVS---------------PNTSSF 327
           G +++A  L + M+    + D     +++     +G VS               PN  ++
Sbjct: 285 GQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTY 344

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +++      ++D A+ +   M   GC  N+  YN LI+G C S R+ E+  LL EM E
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T +++ + LC+      ALNL ++M   G  P +   ++L+   CKHG   E
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 464

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A + L +M +    P+I+ Y+  I G+    ++++A ELF  + A G  PD+  YN++I 
Sbjct: 465 ALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIK 524

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL K     EA + F +M   G +P   +YN++I G+ ++ +   A+  +  M+ K   S
Sbjct: 525 GLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF-S 583

Query: 568 PDVITYTTLID 578
            D  T+  L+D
Sbjct: 584 ADSSTFQMLLD 594



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 163/365 (44%), Gaps = 36/365 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D  +D AL+ F  M ++    +V  +   +  +    +   +  L  +M+  G     ++
Sbjct: 74  DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133

Query: 397 LNSMFRCLCRRQ------DVVG-----------------------------ALNLVRKMR 421
           LN +  CLCR         V+G                             A+ L  +M 
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             GHEP V     +I  LCK+G  + A R    M Q    P++V Y+  I  L   + V+
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+E   ++   G  PDVV YN I+ G C   ++ EA  LF EM+ + ++P   T+N+L+
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G CK G + +A  C+S  + ++   P+  TY  L+DG C+  + D+AI +   M  KGC
Sbjct: 314 DGLCKEGMVSEAR-CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           APN  ++  LI G CK  R   A      M EK + PD   +  L+        P  A  
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 662 VLKEM 666
           + KEM
Sbjct: 433 LFKEM 437



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 22/313 (7%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           S+G + EA  LF ++    + +P+  ++N L++ LCK   V       + M + G   + 
Sbjct: 283 SLGQLNEATRLFKEMVGRNV-MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIER 160
           YT   L+  YC   Q D+A+ V   +I  G       ++IL+  + K   +++A  L+  
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M + N+  +  T+  L+ G  +  R  +AL LF +M  SG   D   Y +++ G CK+  
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCN 277
           L+ AL+L  EM    I P+  + + LI      G+L  + KE++     + +       N
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE-VAKELFSKLSADGIRPDIWTYN 520

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            +++ L+  G  D+AY   + M       D G            P++ S+++II   L++
Sbjct: 521 VMIKGLLKEGLSDEAYEFFRKM------EDDG----------FLPDSCSYNVIIQGFLQN 564

Query: 338 GKLDLALSLFREM 350
                A+ L  EM
Sbjct: 565 QDSSTAIQLIDEM 577


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 300/627 (47%), Gaps = 23/627 (3%)

Query: 26   CFMSPGALG--FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
            C  SP        I   G  G   +A   ++ +K +G+ VP+  + N +L +L +S  + 
Sbjct: 417  CGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI-VPDVAAANAVLSSLARSGRLG 475

Query: 84   LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
            + +    E++D G   D  T T +++    + + D+A++ F+++++ G V D    + L+
Sbjct: 476  MAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLI 535

Query: 143  VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
                K G+ ++A +L  ++ +  I     T+  L+ G  ++ +V + + L ++MT S   
Sbjct: 536  DTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHP 595

Query: 203  SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
             +   Y+ ++  L KN ++  A+ +   M   G TPD    + ++     E       + 
Sbjct: 596  PNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRM 655

Query: 263  IWEDRDV--NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
              + + +       LC +I+   V NG + +A + ++  I                K   
Sbjct: 656  FCQMKKILAPDYATLC-TILPSFVKNGLMKEALHTVKEYI---------------LKADC 699

Query: 321  SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            + + SSF  ++  +L    ++ ++     +   G + N F    LI  LC   +  E+++
Sbjct: 700  NTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ 759

Query: 381  LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            L  + +  G      + NS+ R L     +  A +L  +M+  G  P      L++  + 
Sbjct: 760  LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 819

Query: 441  KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            K  +  E  R   +M ++G+    V Y+  I GL+  KR++ A++L+ ++ + G  P   
Sbjct: 820  KSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 879

Query: 501  AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             Y  ++ GL KA ++ +AE+LFNEM+  G  P+   YN+L+NG   +GN +       +M
Sbjct: 880  TYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM 939

Query: 561  LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            +E +  +PD+ +YT LID LC AGR +D +  + ++ E G  P+ I +  LI GL K +R
Sbjct: 940  VE-QGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998

Query: 621  PRAALVHFRMMKEKGMKPDMFVFVALI 647
               A+  F  MK+KG+ P+++ + +LI
Sbjct: 999  IEEAVCLFNEMKKKGIVPNLYTYNSLI 1025



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 157/631 (24%), Positives = 271/631 (42%), Gaps = 56/631 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  G VG + +   +FD ++++ +   N  ++  +   +     +    + L  M++ 
Sbjct: 117 LMRAHGRVGDMAQ---VFDLMQKQ-IVKANVGTFATVFSGVGVQGGLRSAPVALPVMREA 172

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + YT   L+     SG   +A+ V+  +++ G       +S+L+V+F K  +VD  
Sbjct: 173 GMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTV 232

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   ++ N  ++ + I    + +R D+A Q+  KM  SG   D   + V+I  
Sbjct: 233 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQV 292

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   +L  A  ++ +MK S   PD      L+  C D G+ +  V EIW          
Sbjct: 293 LCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD-SQSVMEIW---------- 341

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                      N  +   YN                            N  S+  +++ L
Sbjct: 342 -----------NAMVADGYN---------------------------DNIVSYTAVVDAL 363

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G+LD AL++F EM + G     + YN+LI G   ++  + + EL   M   G  P  
Sbjct: 364 CQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 423

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T         +    + A+     M+ +G  P V     ++  L + G+   A R   +
Sbjct: 424 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYE 483

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  PD + Y+  I       + D A+  F D+   GC PDV+A N +I  L K  +
Sbjct: 484 LKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGK 543

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  LF+++    + P+  TYN L++G  + G + + M  L  M       P++ITY 
Sbjct: 544 GNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIH-PPNLITYN 602

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T++D L   G  + AI +   M EKGC P+  ++  ++ GL K +R   A   F  MK K
Sbjct: 603 TVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-K 661

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            + PD      ++ +F+       A   +KE
Sbjct: 662 ILAPDYATLCTILPSFVKNGLMKEALHTVKE 692



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 165/693 (23%), Positives = 293/693 (42%), Gaps = 105/693 (15%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG     +EA  +  +++  G C P+  ++  +++ LC +        RL + +D  
Sbjct: 255 IRVLGQAARFDEAYQILGKMEDSG-CKPDVVTHTVVIQVLCDAG-------RLSDAKDVF 306

Query: 97  WGY-------DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           W         D+ T   LL    +SG     + ++N ++  G+ D  V ++ ++ A  + 
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQV 366

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G +D+A  + + M +  I   + ++  LI GF+K    D+AL+LF+ M   G + +   +
Sbjct: 367 GRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 426

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
            + I    K+ Q   A+Q Y  MK  GI PD    + +++S +  G L +  +  +E +D
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486

Query: 269 --VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             V+  T+    +++        D+A N    M++                G V P+  +
Sbjct: 487 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVE---------------TGCV-PDVLA 530

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            + +I+TL K GK + A  LF ++ ++        YN L+ GL    +++E   LL EM 
Sbjct: 531 LNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMT 590

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            S   P   T N++  CL +  +V  A+ ++  M  +G  P +     ++  L K  +  
Sbjct: 591 HSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFE 650

Query: 447 EAFRFLTDM------------------VQEGFL-----------------PDIVCYSAAI 471
           EAFR    M                  V+ G +                  D   + + +
Sbjct: 651 EAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLM 710

Query: 472 GGLIDIKRVDLALE-------------------LFRDICAH----------------GCC 496
            G+++   V+ ++E                   L R +C H                G  
Sbjct: 711 EGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVS 770

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
               +YN +I GL     +  AEDLF EM   G  P   TYNL+++   KS  I++ ML 
Sbjct: 771 LKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEE-MLR 829

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           +   + ++      +TY T+I GL  + R + AI L+  +  +G +P   T+  L+ GL 
Sbjct: 830 VQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 889

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           K  +   A   F  M E G KP+  ++  L++ 
Sbjct: 890 KAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 179/684 (26%), Positives = 289/684 (42%), Gaps = 100/684 (14%)

Query: 6    SRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
            S+A +         D+V++ C     AL  LI  L   G   EA  LF Q+K E    P 
Sbjct: 504  SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLK-EMKIEPT 562

Query: 66   NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA----- 120
            N +YN LL  L +   V  V   L+EM       +  T   +L     +G+ + A     
Sbjct: 563  NGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLY 622

Query: 121  ----------LSVFNEIIDHGWVDEHVFS---------------------ILLVAFSKWG 149
                      LS +N ++ +G + E  F                       +L +F K G
Sbjct: 623  SMTEKGCTPDLSSYNTVM-YGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNG 681

Query: 150  EVDKACELIERM---DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
             + +A   ++      DCN   ++ +F  L+ G + K+ V+K+++  + +   G   +  
Sbjct: 682  LMKEALHTVKEYILKADCNT--DKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDF 739

Query: 207  MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
                +I  LCK+K+   A QL+++ KG G                               
Sbjct: 740  FLCPLIRHLCKHKKALEAHQLFNKFKGLG------------------------------- 768

Query: 267  RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              V+  T   NS++R LV    ID A +L   M +      +G            P+  +
Sbjct: 769  --VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKR------LG----------CGPDEFT 810

Query: 327  FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +++I++ + K  +++  L +  EM + G       YN +I GL  S RLE++ +L   + 
Sbjct: 811  YNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM 870

Query: 387  ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
              GF PT  T   +   L +   +V A NL  +M   G +P      +L+      G   
Sbjct: 871  SEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTE 930

Query: 447  EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
               +    MV++G  PDI  Y+  I  L    R++  L  FR +   G  PD++ YN++I
Sbjct: 931  NVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLI 990

Query: 507  SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
             GL K++R+ EA  LFNEM  KG++P++ TYN LI    K+G   +A      +L K   
Sbjct: 991  DGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIK-GW 1049

Query: 567  SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF-MALITGLCKCDRPRAAL 625
             P+V TY  LI G  ++G  D+A   ++      C    ++   ALI+GL   +    A 
Sbjct: 1050 KPNVFTYNALIRGYSVSGSTDNAYAAYD------CVAVGVSLKTALISGLVDENLINIAE 1103

Query: 626  VHFRMMKEKGMKPDMFVFVALISA 649
              F  MK +G  PD F +  ++ A
Sbjct: 1104 GLFAEMKRRGCGPDQFTYNLILDA 1127



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 230/533 (43%), Gaps = 21/533 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  + LN  T+  LI+  VK     +A++++  M
Sbjct: 145 TFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAM 204

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
            + G +     Y V++    K + ++  L L +EM+  G+ P+   + I  +++   +  
Sbjct: 205 VEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARF 264

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
            E   ++ ++ ED       +    ++++L   G +  A ++   M   +   D    + 
Sbjct: 265 DEAYQILGKM-EDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYIT 323

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           ++ K   S ++ S   I N ++ DG  D                N+  Y  ++D LC   
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYND----------------NIVSYTAVVDALCQVG 367

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+E+  +  EM+E G  P  ++ NS+     +      AL L   M   G  P    + 
Sbjct: 368 RLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 427

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I    K G++++A +    M  +G +PD+   +A +  L    R+ +A  +F ++   
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDM 487

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD + Y ++I    KA +  EA + F++M+  G +P V   N LI+   K G  ++A
Sbjct: 488 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                ++ E +   P   TY TL+ GL   G+  + + L  EM      PN IT+  ++ 
Sbjct: 548 WKLFHQLKEMKI-EPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLD 606

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L K      A+     M EKG  PD+  +  ++   + E     AF +  +M
Sbjct: 607 CLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM 659



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 226/491 (46%), Gaps = 36/491 (7%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            GL++EA     +   +  C  +  S++ L+E +     V+      + +   G   + + 
Sbjct: 681  GLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFF 740

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
            L PL++  C   +  +A  +FN+    G  +    ++ L+        +D A +L   M 
Sbjct: 741  LCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMK 800

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                  +E T+ +++    K  R+++ L++  +M + G+ S    Y+ II GL K+K+LE
Sbjct: 801  RLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLE 860

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
             A+ LY  +   G +P         T C+    L  L+K     + V+   L    +   
Sbjct: 861  QAIDLYYNLMSEGFSP---------TPCTYGPLLDGLLKA---GKMVDAENLFNEMLEYG 908

Query: 283  LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV----SPNTSSFDIIINTLLKDG 338
               N +I   YN+L   + G  IA     +  IF+  V    +P+  S+ ++I+TL   G
Sbjct: 909  CKPNCTI---YNIL---LNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAG 962

Query: 339  KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +L+  LS FR++ ++G   ++ +YN LIDGL  S R+EE+  L  EM++ G  P  +T N
Sbjct: 963  RLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYN 1022

Query: 399  SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            S+   L +      A  +  ++ ++G +P V     LI+     G    A+    D V  
Sbjct: 1023 SLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-DCVAV 1081

Query: 459  GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE- 517
            G    +   +A I GL+D   +++A  LF ++   GC PD   YN+I+  + K+ R+ E 
Sbjct: 1082 G----VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEM 1137

Query: 518  -------AEDL 521
                   AEDL
Sbjct: 1138 LKVQEEIAEDL 1148



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 231/542 (42%), Gaps = 34/542 (6%)

Query: 36   LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            ++ CL   G V  A  ML+   ++   C P+  SYN ++  L K    +       +M+ 
Sbjct: 604  VLDCLSKNGEVNCAIGMLYSMTEKG--CTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKK 661

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG--WVDEHVFSILLVAFSKWGEVD 152
                 D  TL  +L  +  +G   +AL    E I       D+  F  L+        V+
Sbjct: 662  I-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVE 720

Query: 153  KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            K+ E  E +    I LN+   C LI    K  +  +A QLF+K    G +     Y+ +I
Sbjct: 721  KSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLI 780

Query: 213  GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDV 269
             GL     +++A  L++EMK  G  PD E    LI     +    E  L V+     +  
Sbjct: 781  RGLVDENLIDIAEDLFTEMKRLGCGPD-EFTYNLILDAMGKSMRIEEMLRVQAEMHRKGY 839

Query: 270  NTMTLLCNSIMRILVSNGSIDQA----YNL---------------LQAMIKGEPIADVGV 310
             +  +  N+I+  LV +  ++QA    YNL               L  ++K   + D   
Sbjct: 840  ESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAEN 899

Query: 311  EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                + +    PN + ++I++N     G  +    +F +M + G   ++  Y  LID LC
Sbjct: 900  LFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLC 959

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             + RL +     R++ E G +P     N +   L + + +  A+ L  +M+ +G  P + 
Sbjct: 960  TAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLY 1019

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                LI  L K GKA EA +   +++ +G+ P++  Y+A I G       D A   + D 
Sbjct: 1020 TYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-DC 1078

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             A G    V     +ISGL     +  AE LF EM  +G  P   TYNL+++   KS  I
Sbjct: 1079 VAVG----VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRI 1134

Query: 551  DQ 552
            ++
Sbjct: 1135 EE 1136



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 197/455 (43%), Gaps = 25/455 (5%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-LTLLVKEIWEDRDVNTMTL 274
           C+        +++   + +G     E +  ++ S     E L L      +   V+T T 
Sbjct: 51  CRQSAPPAPARVHERRRAAGAGTGTESVVHMLRSAPGPAEALELFTAAARQPTAVHT-TE 109

Query: 275 LCNSIMRILVSNGSID---QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            CN ++ ++ ++G +    Q ++L+Q  I                   V  N  +F  + 
Sbjct: 110 SCNYMLELMRAHGRVGDMAQVFDLMQKQI-------------------VKANVGTFATVF 150

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + +   G L  A      M + G   N + YN LI  L  S    E+ E+ + M E G  
Sbjct: 151 SGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGIS 210

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P+  T + +     +++DV   L L+ +M  +G +P V   T+ I+ L +  +  EA++ 
Sbjct: 211 PSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQI 270

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  M   G  PD+V ++  I  L D  R+  A ++F  + A    PD V Y  ++     
Sbjct: 271 LGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGD 330

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           +       +++N M+  G   ++ +Y  +++  C+ G +D+A+     M EK   SP+  
Sbjct: 331 SGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEK-GISPEQY 389

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           +Y +LI G   A   D A+ L+N M   G +PN  T +  I    K  +   A+  +  M
Sbjct: 390 SYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHM 449

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K KG+ PD+    A++S+        +A  V  E+
Sbjct: 450 KSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 72/404 (17%)

Query: 28   MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
            +  G+   LIR L    L++ A  LF ++KR G C P+ ++YN +L+A+ KS  ++ +  
Sbjct: 771  LKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG-CGPDEFTYNLILDAMGKSMRIEEMLR 829

Query: 88   RLKEMQDYGW--GYDKY---------------------------------TLTPLLQVYC 112
               EM   G+   Y  Y                                 T  PLL    
Sbjct: 830  VQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 889

Query: 113  NSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
             +G+   A ++FNE++++G      +++ILL      G  +  C++ E+M +  I  + K
Sbjct: 890  KAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIK 949

Query: 172  TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            ++ VLI       R++  L  F ++ + G   D  +Y+++I GL K++++E A+ L++EM
Sbjct: 950  SYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEM 1009

Query: 232  KGSGITPDFEILSKLITSCSDEGELT--------LLVKEIWEDRDVNTMTLLCNSIMRIL 283
            K  GI P+    + LI      G+ +        LL+K  W+    N  T   N+++R  
Sbjct: 1010 KKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG-WKP---NVFTY--NALIRGY 1063

Query: 284  VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              +GS D AY     +  G                 VS  T+    +I+ L+ +  +++A
Sbjct: 1064 SVSGSTDNAYAAYDCVAVG-----------------VSLKTA----LISGLVDENLINIA 1102

Query: 344  LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
              LF EM + GC  + F YN ++D +  S R+EE  ++  E+ E
Sbjct: 1103 EGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 249/527 (47%), Gaps = 53/527 (10%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKW 148
           K  QDY +    +  T  L   C S ++D++L     +++ G+  + +  + L+  F   
Sbjct: 68  KHDQDYDFRDTNFMKT--LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNM 125

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            +++KA +++E ++  + + +   +  +I GF K  RVD A ++ D+M K GF  D   Y
Sbjct: 126 KKIEKAIQVMEILEK-HGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTY 184

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +++IG  C   +L++AL++  ++      P                              
Sbjct: 185 NILIGNFCGRGRLDLALRVMDQLLKDNCKPT----------------------------- 215

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T+L  +     ++ G ID+A  LL  M+                +G + P+  +++
Sbjct: 216 VITYTILIEAT----ITQGGIDEAMKLLDEMLS---------------RG-LRPDRYTYN 255

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           +++N + K+G LD A      +++ GC+  V  YN L+  L N  + E   +L+ +M   
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G +P   T +++   LCR   +  A N+++ M+ +   P       LI  LC+ GK   A
Sbjct: 316 GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             FL DM+  G LPDI+ Y++ +  L      D AL +F  +   GC P+  +YN +   
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L  +     A  +  EM++ G+ P   TYN LI+  C+ G +DQA+  L  M E E   P
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            VI+Y T++ GLC   R  DAI +   M  +GC PN  T+  LI G+
Sbjct: 496 TVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 221/477 (46%), Gaps = 23/477 (4%)

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CKS   D     L+ M + G+  D    T L++ + N  + +KA+ V   +  HG  D  
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVF 147

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ ++  F K   VD A ++++RM       +  T+ +LI  F  + R+D AL++ D++
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            K         Y ++I        ++ A++L  EM   G+ PD    + ++     EG L
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID--QAYNLLQAMIKGEPIADVGVEML- 313
                    DR    ++ +          NG +     YN+L   +  E   + G +++ 
Sbjct: 268 ---------DRAFEFLSRIS--------KNGCVAGVSTYNILLRDLLNEGKWEYGEKLMS 310

Query: 314 -MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+ KG   PN  ++  +I  L +DGK+D A ++ + M +     + + Y+ LI  LC  
Sbjct: 311 DMLVKG-CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            +++ + E L +M   G  P   + NS+   LC+  +   ALN+  K+   G  P     
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSY 429

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC- 491
             L   L   G  + A   + +M+  G  PD + Y++ I  L     VD A+EL  D+  
Sbjct: 430 NTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           +  C P V++YN ++ GLCK QR+ +A ++   M+ +G +P+  TY LLI G   +G
Sbjct: 490 SEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 206/476 (43%), Gaps = 54/476 (11%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF    +++KA+Q+ + + K G   D   Y+ +I G CK  +++ A ++   MK  G
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD      ++T                                            YN+
Sbjct: 177 FEPD------VVT--------------------------------------------YNI 186

Query: 296 LQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L     G    D+ + ++  + K    P   ++ I+I   +  G +D A+ L  EM   G
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              + + YN +++G+C    L+ ++E L  + ++G      T N + R L          
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M V+G EP     + LI  LC+ GK  EA   L  M ++   PD   Y   I  L
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               +VDLA+E   D+ + G  PD+++YN I++ LCK     EA ++F ++   G  P+ 
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            +YN L      SG+  +A+  +  ML      PD ITY +LI  LC  G  D AI L  
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSN-GIDPDEITYNSLISCLCRDGLVDQAIELLV 485

Query: 595 EM-EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +M E + C P  I++  ++ GLCK  R   A+     M  +G  P+   +  LI  
Sbjct: 486 DMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQG 541



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 238/495 (48%), Gaps = 55/495 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+   ++  +E+A  + + +++ G   P+ ++YN ++   CK+  VD     L  M+  
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILEKHG--KPDVFAYNAVISGFCKADRVDHASKVLDRMKKR 175

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKA 154
           G+  D  T   L+  +C  G+ D AL V ++++ D+       ++IL+ A    G +D+A
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M    +R +  T+ V+++G  K+  +D+A +   +++K+G  +  + Y++++  
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L    + E   +L S+M   G  P+    S LIT+                         
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA------------------------- 330

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                   L  +G ID+A N+L+ M                 +  ++P+  S+D +I+ L
Sbjct: 331 --------LCRDGKIDEAKNVLKVMK----------------EKALAPDGYSYDPLISAL 366

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            ++GK+DLA+    +M   G + ++  YN+++  LC +   +E+  +  ++ E G  P  
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLT 453
            + N++F  L    D + AL ++ +M   G +P  + +N+ LI  LC+ G   +A   L 
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNS-LISCLCRDGLVDQAIELLV 485

Query: 454 DMVQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
           DM + E   P ++ Y+  + GL  ++R+  A+E+   +   GC P+   Y ++I G+  A
Sbjct: 486 DMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFA 545

Query: 513 QRVAEAEDLFNEMIT 527
               +A +L N ++ 
Sbjct: 546 GWRYDAMELANLLVN 560



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 2/297 (0%)

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C S + +ES   L+ M   G+KP       + +     + +  A+ ++  +   G     
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVF 147

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +N + I   CK  +   A + L  M + GF PD+V Y+  IG      R+DLAL +   
Sbjct: 148 AYNAV-ISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +    C P V+ Y I+I        + EA  L +EM+++GL P   TYN+++NG CK G 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +D+A   LSR + K      V TY  L+  L   G+ +    L ++M  KGC PN IT+ 
Sbjct: 267 LDRAFEFLSR-ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYS 325

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LIT LC+  +   A    ++MKEK + PD + +  LISA   E    LA E L +M
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 192/423 (45%), Gaps = 28/423 (6%)

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV--------------- 308
           ++ RD N M  L  S       +   D++   LQ M+      DV               
Sbjct: 73  YDFRDTNFMKTLNRS-----CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKK 127

Query: 309 ---GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
               ++++ I +    P+  +++ +I+   K  ++D A  +   M + G   +V  YN L
Sbjct: 128 IEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNIL 187

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I   C   RL+ +  ++ ++ +   KPT  T   +      +  +  A+ L+ +M  +G 
Sbjct: 188 IGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGL 247

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P      +++  +CK G    AF FL+ + + G +  +  Y+  +  L++  + +   +
Sbjct: 248 RPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEK 307

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L  D+   GC P+ + Y+ +I+ LC+  ++ EA+++   M  K L P   +Y+ LI+  C
Sbjct: 308 LMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC 367

Query: 546 KSGNIDQAMLCLSRMLEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           + G +D A+  L  M+   SG   PD+++Y +++  LC  G  D+A+ ++ ++ E GC P
Sbjct: 368 REGKVDLAIEFLDDMI---SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPP 424

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N  ++  L   L        AL     M   G+ PD   + +LIS    +     A E+L
Sbjct: 425 NAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELL 484

Query: 664 KEM 666
            +M
Sbjct: 485 VDM 487



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 2/212 (0%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           + K+ C         L+R L + G  E    L   +  +G C PN  +Y+ L+ ALC+  
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG-CEPNPITYSTLITALCRDG 335

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFS 139
            +D  +  LK M++     D Y+  PL+   C  G+ D A+   +++I  G + D   ++
Sbjct: 336 KIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYN 395

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            +L +  K G  D+A  + E++ +     N  ++  L           +AL +  +M  +
Sbjct: 396 SILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           G   D   Y+ +I  LC++  ++ A++L  +M
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQAIELLVDM 487


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 241/495 (48%), Gaps = 35/495 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF +L+H    K  +  AL     M   G + D   Y+ ++   C+   L  A  L 
Sbjct: 209 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLL 268

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRDVNTMTLLCNSIMRI 282
           + MK  GI P     + L+++ +  G   + T +V+ +     + D+ T  +L       
Sbjct: 269 ARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAG---- 324

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +D+A+ L   M           E L I    VSP+  +++ +++   K  +   
Sbjct: 325 LCQAGKVDEAFKLKDEM-----------EHLSI----VSPDVVTYNTLVDACFKYQRSSD 369

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL+L  EM   G   ++  +N ++ GLC   +LEE+   L+ M E G  P   T N++  
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQE 458
             C+ ++V  A  L+ +M   G    +K +T     L+  LCK  +  EA   L    Q 
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSG----LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+PD V Y   +       + + AL L+ ++      P +  YN +I GLC   ++ EA
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEA 545

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D  NE++ KGL+P   TYN++I+ +CK G++++A    ++MLE     PDV+T  TL++
Sbjct: 546 IDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN-YFKPDVVTCNTLMN 604

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC+ G+ + AI L+    EKG   + IT+  LI  LCK      AL  F  M+ +G++P
Sbjct: 605 GLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQP 664

Query: 639 DMFVFVALISAFLSE 653
           D F +  ++SA LSE
Sbjct: 665 DAFTYNVVLSA-LSE 678



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 279/627 (44%), Gaps = 35/627 (5%)

Query: 3   SILSRARRIAPLRVLAQDVVKS----RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKR 58
           S L+R+   +P   L  DV +S    R   +      L+    S G + +A      ++ 
Sbjct: 181 SALARSPSTSPQASL--DVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG 238

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            GL  P+  +YN LL+A C+   +      L  M+  G    + T   L+  Y   G   
Sbjct: 239 FGLS-PDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIK 297

Query: 119 KALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNI-RLNEKTFCVL 176
           +A +V   +   G+  D   +++L     + G+VD+A +L + M+  +I   +  T+  L
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTL 357

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +    K  R   AL L ++M   G  S    +++++ GLC+  QLE AL     M   G+
Sbjct: 358 VDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGL 417

Query: 237 TPDFEILSKLITS-CSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            PD    + LI + C          L+ + +     ++T TL  N+++  L      ++A
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTL--NTLLYNLCKEKRYEEA 475

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL++  +               +G V P+  S+  ++    K+ K + AL L+ EM++
Sbjct: 476 EELLRSPPQ---------------RGFV-PDEVSYGTVMAAYFKENKPEPALYLWDEMSK 519

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                +++ YN LI GLC   +L E+ + L E+ + G  P   T N +    C+  D+  
Sbjct: 520 RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEK 579

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A     KM     +P V     L+  LC HGK  +A +      ++G   D++ Y+  I 
Sbjct: 580 AFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQ 639

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            L     VD AL  F D+ A G  PD   YN+++S L +A R  EA+++ +++   G + 
Sbjct: 640 ALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLS 699

Query: 533 SVATYNLLINGW--CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              +Y L+ +     K+G   +           + G  D  +Y   +  LC+ G+  +A 
Sbjct: 700 ERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGG--DQESYNKSVKELCVGGQLKEAK 757

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCK 617
            + +EM +KG + +  T++ L+ GL K
Sbjct: 758 AVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 35/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +F+++++T    G L  ALS    M   G   +V  YN L+   C    L E+ 
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  M++ G  PT  T N++     R   +  A N+V  M   G EP +    +L   L
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325

Query: 440 CKHGKAMEAFRFLTDMVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           C+ GK  EAF+   +M     + PD+V Y+  +      +R   AL L  ++   G    
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V +NI++ GLC+  ++ EA      M  +GL P V TYN LI+ +CK+ N+ +A + + 
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445

Query: 559 RMLE----------------------------------KESGSPDVITYTTLIDGLCIAG 584
            M+                                   +    PD ++Y T++       
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +P+ A+ LW+EM ++   P+  T+  LI GLC   +   A+     + +KG+ PD   + 
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            +I A+  E +   AF+   +M
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKM 587



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 8/368 (2%)

Query: 305 IADVGVEMLMIFK--GTVSPNTSSFDIIINTLLKDGKL--DLALSLFREMTQIGCMQNVF 360
           +  +  ++L  F+  G V P+  + + +++ L +        +L +FR +  +    N +
Sbjct: 152 LPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHY 211

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +N L+   C+   L ++   L  M+  G  P   T N++ +  CR+  +  A  L+ +M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           + +G  P       L+    + G   +A   +  M   GF PD+  Y+    GL    +V
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 481 DLALELFRDICAHGC--CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           D A +L +D   H     PDVV YN ++    K QR ++A +L  EM  KG+  S+ T+N
Sbjct: 332 DEAFKL-KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +++ G C+ G +++A+  L +M+ +E  +PDVITY TLID  C A     A +L +EM  
Sbjct: 391 IVVKGLCREGQLEEALGRL-KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G   +  T   L+  LCK  R   A    R   ++G  PD   +  +++A+  E  P  
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 659 AFEVLKEM 666
           A  +  EM
Sbjct: 510 ALYLWDEM 517


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/621 (24%), Positives = 297/621 (47%), Gaps = 24/621 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I+      + ++A  +F ++     C P   SYN LL AL +S   D  E      +  
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+++ C   QFDKA  + N + + G+  D   +  L+ + +K G +  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIG 213
            +L + M +  +  +   + +LI GF KK  +  A ++++++ K      +   Y+V+I 
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVN 270
           GLCK  + + + +++  MK +    D    S LI      G L   T + KE+ E+  V+
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN-GVS 322

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              ++ N+++   +  G I++   L + M K       G   ++           S++I+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKE------GCRTVV-----------SYNIL 365

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I  L ++ K+D A+S++  + +  C  +   Y  L+ GLC +  L ++  +L E E    
Sbjct: 366 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
               F  +SM   LCR   +     ++ +M   G +P       +I    +  K  +A R
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  +MV +G  P +V Y+  I GL   +R   A  L +++   G  P+++ Y+++++GLC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           + +++  A +L+ + + KG  P V  +N++I+G C SG ++ A+   S M +++   P++
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC-VPNL 604

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +T+ TL++G       + A  +W+ + + G  P+ I++   + GLC C R   A+     
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLND 664

Query: 631 MKEKGMKPDMFVFVALISAFL 651
             ++G+ P    +  L+ A L
Sbjct: 665 AVDRGVLPTAITWNILVRAVL 685



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 263/559 (47%), Gaps = 58/559 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           +EA   F   +  GL  PN  +YN L++  C+    D  +  L  M + G+  D ++   
Sbjct: 131 DEAESFFLYFETMGLS-PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT 189

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM-DDC 164
           L+     +G    AL +F+E+ + G   D   ++IL+  F K G++  A E+ ER+    
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           ++  N  ++ V+I+G  K  + D++ +++ +M K+    D   Y  +I GLC +  L+ A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL---------------------TLLVK-- 261
            ++Y EM  +G++PD  + + ++      G +                      +L++  
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369

Query: 262 ----------EIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                      IWE   ++D    ++    ++  L  NG +++A ++L+    G    D 
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429

Query: 309 GVEMLMI-------------------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                MI                    K    PN    + +IN  ++  KL+ AL  F  
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   GC   V  YN LI+GL  + R  E+Y L++EM   G+KP   T + +   LC+ + 
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  ALNL  +   +G +P VK + ++I  LC  GK  +A +  ++M Q   +P++V ++ 
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + G   ++  + A +++  I  +G  PD+++YNI + GLC   R+++A    N+ + +G
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669

Query: 530 LIPSVATYNLLINGWCKSG 548
           ++P+  T+N+L+     +G
Sbjct: 670 VLPTAITWNILVRAVLDNG 688



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 252/565 (44%), Gaps = 58/565 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIID-----HGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           +++ Y  +   D+AL +F  + +      G    +     L+  +KW E +      E M
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  N +T+ +LI    +K + DKA +L + M + GF+ D   Y  +I  L KN  +
Sbjct: 144 ---GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             AL+L+ EM   G+TPD    + LI     +G++ L   EIWE                
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI-LNASEIWE---------------- 243

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                            ++KG                +V PN  S++++IN L K GK D
Sbjct: 244 ----------------RLLKGP---------------SVYPNIPSYNVMINGLCKCGKFD 272

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            +  ++  M +    Q+++ Y+ LI GLC S  L+ +  + +EM E+G  P     N+M 
Sbjct: 273 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTML 332

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
               R   +   L L + M  +G    V +N +LI+ L ++ K  EA      + ++   
Sbjct: 333 NGYLRAGRIEECLELWKVMEKEGCRTVVSYN-ILIRGLFENAKVDEAISIWELLPEKDCC 391

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            D + Y   + GL     ++ AL +  +        D  AY+ +I+GLC+  R+ E   +
Sbjct: 392 ADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGV 451

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
            ++M   G  P+    N +ING+ ++  ++ A+     M+ K    P V+TY TLI+GL 
Sbjct: 452 LDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLS 510

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            A R  +A  L  EM  KG  PN IT+  L+ GLC+  +   AL  +    EKG KPD+ 
Sbjct: 511 KAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 570

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
           +   +I    S      A ++  EM
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEM 595



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 2/258 (0%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L R  R+  +  +   + K  C  +P     +I        +E+A   F  +  +G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P   +YN L+  L K+         +KEM   GW  +  T + L+   C   + D A
Sbjct: 495 -CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L+++ + ++ G+  D  + +I++      G+V+ A +L   M       N  T   L+ G
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K    ++A +++D + + G   D   Y++ + GLC   ++  A+   ++    G+ P 
Sbjct: 614 FYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 673

Query: 240 FEILSKLITSCSDEGELT 257
               + L+ +  D G LT
Sbjct: 674 AITWNILVRAVLDNGALT 691


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 292/635 (45%), Gaps = 35/635 (5%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P    +++  L   G VE+   +FD ++++ +   N  +Y  + +AL     +      
Sbjct: 121 TPETCNYMLEFLRVHGRVEDMAFVFDLMQKQ-VINRNPNTYLTIFKALSIKGGIRQAPFA 179

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSK 147
           L +M+  G+  + Y+   L+      G   +AL V+  +I  G       +S L+VA  +
Sbjct: 180 LGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGR 239

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             +     +L+E M+   +R N  T+ + I    +  R+D A  +   M   G   D   
Sbjct: 240 RRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVT 299

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED- 266
           Y V+I  LC   +L+ A +LY++M+ S   PD      L++   + G+L   VK  W + 
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET-VKRFWSEM 358

Query: 267 ------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGT 319
                  DV T T+L  +    L  +G +DQA+++L  M ++G                 
Sbjct: 359 EADGYAPDVVTYTILVEA----LCKSGKVDQAFDMLDVMRVRG----------------- 397

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +++ +I+ LL   +LD AL LF  M  +G     + Y   ID        E++ 
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +   +M++ G  P+    N+    L     +  A ++   +   G  P      +++K  
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K G+  +A + LT+M+ EG  PDI+  ++ I  L    RVD A ++F  +      P V
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YNI+I+GL K  ++ +A DLF  M   G  P+  T+N L++  CK+  +D A+    R
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M      SPDV+TY T+I GL   GR   A   +++M +K  +P+ +T   L+ G+ K  
Sbjct: 638 MTIMNC-SPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDG 695

Query: 620 RPRAAL-VHFRMMKEKGMKPDMFVFVALISAFLSE 653
           R   A+ +    + + G++    V+  L+   L E
Sbjct: 696 RVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIE 730



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 280/632 (44%), Gaps = 29/632 (4%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L  +G + EA  +F+ +   GL  P++ +YN +++   K+  +D     L EM   G   
Sbjct: 482  LAEMGRIREAKDIFNDIHNCGLS-PDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     +G+ D+A  +F  + D       V ++IL+    K G++ KA +L 
Sbjct: 541  DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
              M +     N  TF  L+    K   VD AL++F +MT    + D   Y+ II GL K 
Sbjct: 601  GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKE 660

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWEDRDVNTMTLL 275
             +   A   Y +MK   ++PD   L  L+     +G +   +K   E      + T   +
Sbjct: 661  GRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719

Query: 276  CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------------FK 317
               +M  ++    I++A +  + ++      D  + + +I                  F 
Sbjct: 720  WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFT 779

Query: 318  GTVS--PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             ++   P   S++ +++ LL     + AL LF EM   GC  N+F YN L+D    S R+
Sbjct: 780  KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839

Query: 376  EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +E +EL  EM   G KP   T N +   L +   +  AL+L  ++      P       L
Sbjct: 840  DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899

Query: 436  IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
            I  L K G++ EA +   +M      P+   Y+  I G      V++A +LF+ +   G 
Sbjct: 900  IGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959

Query: 496  CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             PD+ +Y I++  L    RV +A   F E+   GL P   +YNL+ING  KS  +++A+ 
Sbjct: 960  RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALS 1019

Query: 556  CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
              S M  K  G SP++ TY  LI     AG  D A  ++ E++  G  PN  T+ ALI G
Sbjct: 1020 LFSEM--KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077

Query: 615  LCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
              K      A   F+ M   G  P+   F  L
Sbjct: 1078 HSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 165/628 (26%), Positives = 298/628 (47%), Gaps = 22/628 (3%)

Query: 28   MSPGALGFL--IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            ++P A  ++  I   G +G  E+A   F+++K+ G+ +P+  + N  L +L +   +   
Sbjct: 433  VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI-MPSIAACNASLYSLAEMGRIREA 491

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            +    ++ + G   D  T   +++ Y  +GQ DKA  +  E++  G   D  V + L+  
Sbjct: 492  KDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDT 551

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              K G VD+A ++  R+ D  +     T+ +LI G  K+ ++ KAL LF  M +SG   +
Sbjct: 552  LYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPN 611

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
               ++ ++  LCKN  +++AL+++  M     +PD    + +I     EG         W
Sbjct: 612  TVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY---AFW 668

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-VGVEMLMIFKGTVSPN 323
                           M+  +S   +   Y LL  ++K   + D + + M  + +  +  +
Sbjct: 669  FYHQ-----------MKKFLSPDHV-TLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTS 716

Query: 324  TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
               +  ++  +L + +++ A+S    +      Q+  L   LI  LC   +  ++ +L  
Sbjct: 717  NQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFD 776

Query: 384  EMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +  +S G  PT  + N +   L        AL L  +M+  G  P +    LL+    K 
Sbjct: 777  KFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKS 836

Query: 443  GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
             +  E F    +M+  G  P+I+ ++  I  L+    ++ AL+L+ +I +    P    Y
Sbjct: 837  KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTY 896

Query: 503  NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
              +I GL KA R  EA  +F EM      P+ A YN+LING+ K+GN++ A     RM+ 
Sbjct: 897  GPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMI- 955

Query: 563  KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            KE   PD+ +YT L++ L + GR DDA+  + E++  G  P+ +++  +I GL K  R  
Sbjct: 956  KEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLE 1015

Query: 623  AALVHFRMMKEKGMKPDMFVFVALISAF 650
             AL  F  MK +G+ P+++ + ALI  F
Sbjct: 1016 EALSLFSEMKNRGISPELYTYNALILHF 1043



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 176/671 (26%), Positives = 296/671 (44%), Gaps = 61/671 (9%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G +++A  +   ++ EG C P+  +Y  L++ALC +  +D  +    +M+   
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEG-CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D  T   L+  + N G  +     ++E+   G+  + V ++IL+ A  K G+VD+A 
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           ++++ M    I  N  T+  LI G +   R+D+AL+LF+ M   G A  A  Y + I   
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTM 272
            K    E AL  + +MK  GI P     +  + S ++ G +    K+I+ D     ++  
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIRE-AKDIFNDIHNCGLSPD 506

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           ++  N +M+     G ID+A  LL  M+        G E          P+    + +I+
Sbjct: 507 SVTYNMMMKCYSKAGQIDKATKLLTEML------SEGCE----------PDIIVVNSLID 550

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           TL K G++D A  +F  +  +     V  YN LI GL    +L ++ +L   M+ESG  P
Sbjct: 551 TLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPP 610

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N++  CLC+   V  AL +  +M +    P V     +I  L K G+A  AF F 
Sbjct: 611 NTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFY 670

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD----------------------- 489
             M ++   PD V     + G++   RV+ A+++  +                       
Sbjct: 671 HQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILI 729

Query: 490 -------------ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVA 535
                        +  +  C D      +I  LCK ++  +A+ LF++     G  P+  
Sbjct: 730 EAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE 789

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN L++G     NI +A L L   ++     P++ TY  L+D    + R D+   L+NE
Sbjct: 790 SYNCLMDGLLGC-NITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M  +GC PN IT   +I+ L K +    AL  +  +      P    +  LI   L    
Sbjct: 849 MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGR 908

Query: 656 PPLAFEVLKEM 666
              A ++ +EM
Sbjct: 909 SEEAMKIFEEM 919



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 239/588 (40%), Gaps = 120/588 (20%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G V+    + + M    I  N  T+  +      K  + +A     KM ++GF  +A  Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + +I  L +    + AL++Y  M   G+ P  +  S L+ +             +   RD
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVA-------------LGRRRD 242

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
             T       IM +L                   E +  +G+           PN  ++ 
Sbjct: 243 TGT-------IMDLL-------------------EEMETLGLR----------PNIYTYT 266

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I I  L + G++D A  + + M   GC  +V  Y  LID LC + +L+++ EL  +M  S
Sbjct: 267 ICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRAS 326

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             KP   T  ++        D+        +M   G+ P V   T+L++ LCK GK  +A
Sbjct: 327 SHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQA 386

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY------ 502
           F  L  M   G +P++  Y+  I GL++++R+D ALELF ++ + G  P   +Y      
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446

Query: 503 -----------------------------NIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                                        N  +  L +  R+ EA+D+FN++   GL P 
Sbjct: 447 YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA---- 589
             TYN+++  + K+G ID+A   L+ ML  E   PD+I   +LID L  AGR D+A    
Sbjct: 507 SVTYNMMMKCYSKAGQIDKATKLLTEMLS-EGCEPDIIVVNSLIDTLYKAGRVDEAWQMF 565

Query: 590 -------------------------------IMLWNEMEEKGCAPNRITFMALITGLCKC 618
                                          + L+  M+E GC PN +TF AL+  LCK 
Sbjct: 566 GRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN 625

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           D    AL  F  M      PD+  +  +I   + E     AF    +M
Sbjct: 626 DAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM 673



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 232/547 (42%), Gaps = 58/547 (10%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
            LI  LG  G + +A  LF  +K  G C PN  ++N LL+ LCK+ +VDL       M   
Sbjct: 583  LITGLGKEGKLLKALDLFGSMKESG-CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM 641

Query: 95   -------------YG-----------WGY---------DKYTLTPLLQVYCNSGQFDKAL 121
                         YG           W Y         D  TL  LL      G+ + A+
Sbjct: 642  NCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 122  SVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +  E +    +     V+  L+       E+++A    E +   +I  ++     LI  
Sbjct: 702  KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761

Query: 180  FVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K+ +   A +LFDK TKS G       Y+ ++ GL      E AL+L+ EMK +G  P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 239  DFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +    + L+ +      +  L  E++ +   R      +  N I+  LV + SI++A +L
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELF-ELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 296  LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               +I G+                 SP   ++  +I  LLK G+ + A+ +F EM    C
Sbjct: 881  YYEIISGD----------------FSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924

Query: 356  MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
              N  +YN LI+G   +  +  + +L + M + G +P   +   +  CL     V  A++
Sbjct: 925  KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 416  LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
               ++++ G +P      L+I  L K  +  EA    ++M   G  P++  Y+A I    
Sbjct: 985  YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFG 1044

Query: 476  DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            +   VD A ++F ++   G  P+V  YN +I G  K+     A  +F +M+  G  P+  
Sbjct: 1045 NAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAG 1104

Query: 536  TYNLLIN 542
            T+  L N
Sbjct: 1105 TFAQLPN 1111



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 3/346 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P T ++  ++  L   G+++    +F  M +    +N   Y  +   L     + ++  
Sbjct: 121 TPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPF 178

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            L +M ++GF    ++ N +   L +      AL + ++M  +G +P +K  + L+  L 
Sbjct: 179 ALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALG 238

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +          L +M   G  P+I  Y+  I  L    R+D A  + + +   GC PDVV
Sbjct: 239 RRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVV 298

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y ++I  LC A ++ +A++L+ +M      P + TY  L++ +   G+++      S M
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            E +  +PDV+TYT L++ LC +G+ D A  + + M  +G  PN  T+  LI+GL    R
Sbjct: 359 -EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL  F  M+  G+ P  + +V  I  +    +P  A +  ++M
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKM 463


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 286/619 (46%), Gaps = 58/619 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +  G  V + ++YN L+   C+   +D     +  M   
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPV-DVFAYNTLVAGYCRYGHLDAARRLIGSMP-- 138

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TPL++V C+ G+   ALS+ ++++  G     V +++LL A  +    ++A
Sbjct: 139 -VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQA 197

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M       N  T+ V+I+G  ++ RVD A +L +++   GF  D   Y  ++ G
Sbjct: 198 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKG 257

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC +K+ +   +L++EM      P+               E+T                 
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPN---------------EVTF---------------- 286

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +L+ M +                   + NT+  +I+IN++
Sbjct: 287 --DMLIRFFCRGGMVERAIQVLEQMTEH----------------GCATNTTLCNIVINSI 328

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A  L  +M   GC  +   Y  ++ GLC + R +++ ELL EM  +   P  
Sbjct: 329 CKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNE 388

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++  +  A+ L+ +M   G    V     L+   C  G    A      
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 448

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M  +   P+ + Y+  + GL + +R+D A EL  ++    C P+VV +N+++S  C+   
Sbjct: 449 MPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGF 505

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA +L  +M+  G  P++ TYN L++G  K  + + A+  L  ++ K   SPDVIT++
Sbjct: 506 LEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK-GVSPDVITFS 564

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           ++I  L    R ++A+ L++ +++ G  P  + +  ++ GLCK      A+  F  M   
Sbjct: 565 SIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN 624

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P+   ++ LI     E
Sbjct: 625 GCMPNESTYIILIEGLAHE 643



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 162/542 (29%), Positives = 265/542 (48%), Gaps = 37/542 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A  +  LIR L   G V +A  L D + R G C PN  +Y  LLEA+C++   +  
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG-CQPNVVTYTVLLEAMCRNSGFEQA 197

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL-- 142
              L EM+  G   +  T   ++   C  G+ D A  + N +  +G+  + V ++ LL  
Sbjct: 198 MAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKG 257

Query: 143 -VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
             A  +W +V+   EL   M + N   NE TF +LI  F +   V++A+Q+ ++MT+ G 
Sbjct: 258 LCASKRWDDVE---ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF----EILSKLITSCSDEGELT 257
           A++  + +++I  +CK  +++ A +L ++M   G  PD      +L  L  +   +    
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
           LL + +  +   N +T   N+ + IL   G I+QA  L++ M   E    VGV       
Sbjct: 375 LLNEMVRNNCPPNEVTF--NTFICILCQKGLIEQAIMLIEQM--SEHGCTVGV------- 423

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                   +++ ++N     G +D AL LFR M    C  N   Y  L+ GLCN+ RL+ 
Sbjct: 424 -------VTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDG 473

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLI 436
           + EL+ EM      P   T N +    C++  +  A+ LV +M   G  P  + +NTLL 
Sbjct: 474 AAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLL- 532

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             + K   + +A   L  +V +G  PD++ +S+ IG L    R++ A++LF  +   G  
Sbjct: 533 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMR 592

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P  V YN I+ GLCK   +  A D F  M++ G +P+ +TY +LI G    G + +A   
Sbjct: 593 PKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDL 652

Query: 557 LS 558
           LS
Sbjct: 653 LS 654



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 228/517 (44%), Gaps = 32/517 (6%)

Query: 154 ACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           A  L+ER   C+    +   C  LI    ++ R   A ++      SG   D   Y+ ++
Sbjct: 59  AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRD 268
            G C+   L+ A +L   M    + PD    + LI    D G     L+LL   +     
Sbjct: 119 AGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 175

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            N +T     ++  +  N   +QA  +L  M  KG                  +PN  ++
Sbjct: 176 PNVVTY--TVLLEAMCRNSGFEQAMAVLDEMRAKG-----------------CTPNIVTY 216

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           ++IIN + ++G++D A  L   +   G   +   Y  L+ GLC S R ++  EL  EM E
Sbjct: 217 NVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T + + R  CR   V  A+ ++ +M   G         ++I  +CK G+  +
Sbjct: 277 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           AF+ L DM   G  PD + Y+  + GL   +R D A EL  ++  + C P+ V +N  I 
Sbjct: 337 AFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LC+   + +A  L  +M   G    V TYN L+NG+C  G+ID A+     M  K    
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---- 452

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+ ITYTTL+ GLC A R D A  L  EM    C PN +TF  L++  C+      A+  
Sbjct: 453 PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
              M E G  P++  +  L+     + +   A E+L 
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 179/396 (45%), Gaps = 25/396 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  ++R   +  L  ++++  C  +      LIR     G+VE A  + +Q+   G C  
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG-CAT 316

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++ ++CK   VD     L +M  YG   D  + T +L+  C + ++D A  + 
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           NE++ +    +E  F+  +    + G +++A  LIE+M +    +   T+  L++GF  +
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D AL+LF  M       +   Y  ++ GLC  ++L+ A +L +EM      P+    
Sbjct: 437 GHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + L++    +G   E   LV+++ E        +  N+++  +  + S + A  LL  ++
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMME-HGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG VSP+  +F  II  L K+ +++ A+ LF  +  IG      
Sbjct: 553 S---------------KG-VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +YN ++ GLC    ++ + +    M  +G  P   T
Sbjct: 597 VYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNEST 632


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/599 (26%), Positives = 288/599 (48%), Gaps = 37/599 (6%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N +L +LC    +   E  L++M++     +  T   +L  Y   G+   AL + +++  
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +G   D + ++I++    K     +A  L++RM + N+  +E ++  LIHGF  + +++ 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ +F++M +       A Y  +I G C+N + + A ++  EM+ +G+ P     +K I 
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
            C       +L   I  D DV T + L N         G I +A    Q M + +     
Sbjct: 413 KC-------MLADGI--DPDVITYSALINE--------GMIAEAEQFKQYMSRMK----- 450

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                      +S + +SF+ II++  + G +  A S++  M + G   ++  Y +L+ G
Sbjct: 451 -----------ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 499

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC    L ++ E +  + E        TLN++   +C+   +  AL+L  KM  +   P 
Sbjct: 500 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 559

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+L+   CK GK + A   L  M+++G +PD + Y+  + GL++  +V  A  +F+
Sbjct: 560 TYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 619

Query: 489 D-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + IC  G   D +AYN +++G  K  ++ E E L   M    + PS A+YN+L++G+ K 
Sbjct: 620 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKK 679

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G + +  L L R + KE   PD +TY  LI GLC  G  + A+    +M  +G  P+ + 
Sbjct: 680 GQLSRT-LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLA 738

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  LI    +  +   AL  F  MK   M P    +VA+++  + +     ++E+L +M
Sbjct: 739 FDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDM 797



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 248/521 (47%), Gaps = 21/521 (4%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACEL 157
           +D  +   ++  YC  G   +A SV++ ++ HGW  D   +  LL    + G + +A E 
Sbjct: 453 FDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEF 512

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +  + +    ++EKT   L+ G  K   +D+AL L +KM       D   Y +++ G CK
Sbjct: 513 MVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 572

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTL 274
             ++  AL L   M   G+ PD    + L+    +EG++   + + +EI     +    +
Sbjct: 573 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 632

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NS+M   +  G I++   L++ M + E                V P+++S++I+++  
Sbjct: 633 AYNSMMNGYLKGGQINEIERLMRNMHENE----------------VYPSSASYNILMHGY 676

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           +K G+L   L L+R+M + G   +   Y  LI GLC    +E + + L +M   G  P +
Sbjct: 677 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 736

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
              + + +    +  +  AL L   M+     P  K    ++  L +     +++  L D
Sbjct: 737 LAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHD 796

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+ G  P    Y A I     +  +D A EL  D+ A G  P  VA + I+ GLCK  +
Sbjct: 797 MVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 856

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V EA  +F+ ++  G++P++AT+  L++G CK   ID A   L +++E      DV+TY 
Sbjct: 857 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA-FHLKQLMESCGLKVDVVTYN 915

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            LI GLC      DA+ L+ EM+ KG  PN  T++ L   +
Sbjct: 916 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 956



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 254/533 (47%), Gaps = 28/533 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G++ EA      + R  +   +  S+NC++++ C+  +V         M  +GW  D  T
Sbjct: 434 GMIAEAEQFKQYMSRMKISF-DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 492

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              LL+  C  G   +A      +++    +DE   + LLV   K G +D+A +L E+M 
Sbjct: 493 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 552

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             NI  +  T+ +L+ GF K+ +V  AL L   M + G   D   Y  ++ GL    Q++
Sbjct: 553 TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 612

Query: 223 MALQLYSEMK-GSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
            A  ++ E+    G+  D    + ++      G   E+  L++ + E+ +V   +   N 
Sbjct: 613 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHEN-EVYPSSASYNI 671

Query: 279 IMRILVSNGSIDQAYNLLQAMIKG--EP----------------IADVGVEML--MIFKG 318
           +M   +  G + +   L + M+K   +P                + ++ V+ L  M+ +G
Sbjct: 672 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEG 731

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            V P+  +FDI+I    +  K+  AL LF  M  +    +   Y  +++GL   N L++S
Sbjct: 732 -VFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQS 790

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           YE+L +M ESG +P H    ++    CR  D+ GA  L   M+  G  P     + +++ 
Sbjct: 791 YEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 850

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK GK  EA    + +++ G +P I  ++  + GL    ++D A  L + + + G   D
Sbjct: 851 LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 910

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           VV YN++I+GLC  + + +A DL+ EM +KGL+P++ TY  L      +G + 
Sbjct: 911 VVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 963



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 157/690 (22%), Positives = 301/690 (43%), Gaps = 90/690 (13%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  + A  + D +++ G+   + Y+YN +++ LCK        + LK M++     D+ +
Sbjct: 278 GRCKSALRILDDMEKNGI-EADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +   G+ + A+ +FN+++          ++ L+  + + G  D+A  ++  M 
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 163 DCNIRLNEKTF------CVLIHG----------FVKKSRVDKALQLFDKMTKSGFASDAA 206
              +R  E +       C+L  G           + +  + +A Q    M++   + D A
Sbjct: 397 ITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVA 456

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKE 262
            ++ II   C+   +  A  +Y  M   G  PD      L+      G L      +V  
Sbjct: 457 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 516

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--------------------KG 302
           + +   ++  TL  N+++  +  +G++D+A +L + M+                    +G
Sbjct: 517 LEKACAIDEKTL--NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 574

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFL 361
           + +  + +  +M+ KG V P+T ++  ++N L+ +G++  A  +F+E+  + G   +   
Sbjct: 575 KVVPALILLQMMLEKGLV-PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 633

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++++G     ++ E   L+R M E+   P+  + N +     ++  +   L L R M 
Sbjct: 634 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 693

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC--------------- 466
            +G +P      LLI  LC++G    A +FL  MV EG  PD +                
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 753

Query: 467 --------------------YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
                               Y A + GLI    +  + E+  D+   G  P    Y  +I
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALI 813

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +  C+   +  A +L  +M   G++PS    + ++ G CK G +++A++  S ++ +   
Sbjct: 814 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM-RAGM 872

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK----CDRPR 622
            P + T+TTL+ GLC   + DDA  L   ME  G   + +T+  LITGLC     CD   
Sbjct: 873 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD--- 929

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            AL  +  MK KG+ P++  ++ L  A  +
Sbjct: 930 -ALDLYEEMKSKGLLPNITTYITLTGAMYA 958



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/605 (23%), Positives = 253/605 (41%), Gaps = 98/605 (16%)

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV--L 176
           +A+SV   +   G+    +FS LL               I R D  N+      F V  L
Sbjct: 126 QAMSVLRHLALTGFSCSAIFSSLL-------------RTISRCDPTNL------FSVDLL 166

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           ++ +VK+ +V  A      M + GF +     + I+  L    + E       E      
Sbjct: 167 VNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKF 226

Query: 237 TPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
             D    + ++ S   +G+L+    +++++   R  N +T   N+I+   V  G    A 
Sbjct: 227 PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTY--NTILNWYVKKGRCKSAL 284

Query: 294 NLLQAMIKGEPIADVGVEMLMIFK-------------------GTVSPNTSSFDIIINTL 334
            +L  M K    AD+    +MI K                     ++P+  S++ +I+  
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
             +GK++LA+ +F +M +     +V  Y  LIDG C + R +E+  +L EM+ +G +P  
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPRE 404

Query: 395 FT-LNSMFRCLCR---RQDVVGALNLVRKMRVQGHEPWVKHNTLL------------IKE 438
            +    + +C+       DV+    L+ +  +   E + ++ + +            I  
Sbjct: 405 VSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 464

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C+ G  +EAF    +MV+ G+ PDI  Y + + GL     +  A E    +    C  D
Sbjct: 465 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 524

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
               N ++ G+CK   + EA DL  +M+T+ ++P   TY +L++G+CK G +  A++ L 
Sbjct: 525 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 584

Query: 559 RMLEKESGSPDVITYTTLIDGL-------------------------CIA---------- 583
            MLEK    PD I YT L++GL                         CIA          
Sbjct: 585 MMLEK-GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 643

Query: 584 -GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ ++   L   M E    P+  ++  L+ G  K  +    L  +R M ++G+KPD   
Sbjct: 644 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 703

Query: 643 FVALI 647
           +  LI
Sbjct: 704 YRLLI 708



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 55/418 (13%)

Query: 253 EGELTL-LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGV 310
            G+L L ++  I +   ++ +T +    + ILV      QA ++L+ + + G   + +  
Sbjct: 87  HGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFS 146

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
            +L         N  S D+++N  +K+GK LD A ++F  M + G   ++F  NN+++ L
Sbjct: 147 SLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFF-MDECGFKASLFSCNNILNAL 205

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
              N+ E  +  L+E  +  F     T N +   LC +  +  A ++++KM+       V
Sbjct: 206 VGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAV 265

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +NT+L     K G+   A R L DM + G   D+  Y+  I  L  +KR   A  L + 
Sbjct: 266 TYNTIL-NWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKR 324

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +      PD  +YN +I G     ++  A  +FN+M+ + L PSVATY  LI+G+C++G 
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384

Query: 550 IDQAMLCLSRM-------------------LEKESGSPDVITYTTL-------------- 576
            D+A   L  M                   +  +   PDVITY+ L              
Sbjct: 385 TDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQ 444

Query: 577 -----------------IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
                            ID  C  G   +A  +++ M   G  P+  T+ +L+ GLC+
Sbjct: 445 YMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 502



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 6/218 (2%)

Query: 28  MSPGALGFLIRCLGSVG---LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           MSP +  ++    G +    L +   +L D V  E    P +  Y  L+ A C+   +D 
Sbjct: 767 MSPSSKTYVAMVNGLIRKNWLQQSYEILHDMV--ESGLQPKHTHYIALINAKCRVGDIDG 824

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLV 143
                ++M+  G    +   + +++  C  G+ ++A+ VF+ I+  G V     F+ L+ 
Sbjct: 825 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 884

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              K  ++D A  L + M+ C ++++  T+ VLI G   K  +  AL L+++M   G   
Sbjct: 885 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 944

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   Y  + G +     ++   +L  +++  GI P ++
Sbjct: 945 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYK 982


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/625 (26%), Positives = 285/625 (45%), Gaps = 61/625 (9%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           +   LEA CK    D  +  L EM++ G G +  T   L+   C SG  ++A     ++ 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 129 DHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D+G V D   +  L+    K    ++A  L++ M    ++ N   +  LI GF+++   D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A ++  +M  +G   +   YD ++ GLCK  Q++ A  L  +M      PD    + +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 248 TS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                  S +    LL +   E+  ++      + ++  L  +G  ++A +LL+ M    
Sbjct: 405 EGHFRHHSKKDAFRLLSE--MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT-- 460

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        KG + PN   +  +I+   ++G + LA  +F +MT++  + +++ YN
Sbjct: 461 -------------KG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 506

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI GL    R+EES +   +M+E G  P  FT + +     +  D+  A  LV++M   
Sbjct: 507 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 566

Query: 424 GHEP-----------WVKHNT------------------------LLIKELCKHGKAMEA 448
           G +P           + K +                         +LI  L   G    A
Sbjct: 567 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 626

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           FR L+ + + G +PD+  YS+ I GL      + A  +  ++   G  P++V YN +I G
Sbjct: 627 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 686

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK+  ++ A ++FN ++ KGL+P+  TY  LI+G CK G+I  A    + ML     +P
Sbjct: 687 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT-GITP 745

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D   Y+ L  G   AG  + A+ L  EM  +G A +  +F  L+ G CK  + +  L   
Sbjct: 746 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLL 804

Query: 629 RMMKEKGMKPDMFVFVALISAFLSE 653
            ++  +G+ P+      +IS  LSE
Sbjct: 805 HVIMGRGLVPNALTIENIISG-LSE 828



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 292/638 (45%), Gaps = 38/638 (5%)

Query: 53  FDQVK------REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           FD  K      RE  C  N  +YN L+  LC+S +V+      K+M+DYG   D +T   
Sbjct: 238 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 297

Query: 107 LLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           L+   C S + ++A ++ +E+    +    V   V++ L+  F + G  D+A ++I+ M 
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVV---VYANLIDGFMREGNADEAFKMIKEMV 354

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ N+ T+  L+ G  K  ++D+A  L  +M +     D   Y++II G  ++   +
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSI 279
            A +L SEM+ +GI+P+    S +I      GE    + L++E+   + +     +   +
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM-TTKGLKPNAFVYAPL 473

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK----GTVS-------------- 321
           +      G++  A  +   M K   + D+     +IF     G V               
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533

Query: 322 -PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  ++  +I+  LK+G L+ A  L + M   G   N  +Y +L++    S+ +E+   
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 593

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
             + M + G    +     +   L    ++  A  ++  +   G  P V   + LI  LC
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 653

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K     +AF  L +M ++G  P+IVCY+A I GL     +  A  +F  I A G  P+ V
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 713

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I G CK   ++ A  L+NEM+  G+ P    Y++L  G   +G+++QAM  +  M
Sbjct: 714 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             +  G   + ++  L+DG C  G+  + + L + +  +G  PN +T   +I+GL +  +
Sbjct: 774 FLR--GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 831

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
                  F  +++K  +     F +L    +++   PL
Sbjct: 832 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 240/562 (42%), Gaps = 54/562 (9%)

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L A+ K  E D A +++  M +    LN  T+ VLI G  +   V++A      M   G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   Y  +I GLCK+++   A  L  EM  + + P+  + + LI     EG      K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
            I E     V    +  ++++R L   G +D+A  LL+ M++                 +
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD----------------S 392

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+T ++++II    +      A  L  EM   G   NV+ Y+ +I GLC S   E++ 
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM   G KP  F    +    CR  +V  A  +  KM      P +     LI  L
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K G+  E+ ++   M + G LP+   YS  I G +    ++ A +L + +   G  P+ 
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGL----------------------------- 530
           V Y  ++    K+  + +    F  M+ +G+                             
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 531 ------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
                 +P V  Y+ LI+G CK+ + ++A   L  M  K+   P+++ Y  LIDGLC +G
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM-SKKGVDPNIVCYNALIDGLCKSG 691

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
               A  ++N +  KG  PN +T+ +LI G CK      A   +  M   G+ PD FV+ 
Sbjct: 692 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 751

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L +   S  +   A  +++EM
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEM 773



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 270/596 (45%), Gaps = 60/596 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  +G ++ A++L  Q+ R+    P+  +YN ++E   +  S       L EM++ 
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDS-HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 426

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   + YT + ++   C SG+ +KA  +  E+   G   +  V++ L+  + + G V  A
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           CE+ ++M   N+  +   +  LI G  K  RV+++ + F +M + G   +   Y  +I G
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTM 272
             KN  LE A QL   M  +G+ P+  I   L+ S   SD+ E      +   D+ V   
Sbjct: 547 YLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV--- 603

Query: 273 TLLCNSIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIF------------ 316
            +L N I  IL+ N    G+++ A+ +L  + K   + DV V   +I             
Sbjct: 604 -MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662

Query: 317 -------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  K  V PN   ++ +I+ L K G +  A ++F  +   G + N   Y +LIDG 
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C    +  ++ L  EM  +G  P  F  + +        D+  A+ L+ +M ++GH    
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 782

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
             N L +   CK GK  E  + L  ++  G +P+ +     I GL +  ++     +F +
Sbjct: 783 SFNNL-VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 841

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEA-----EDLFNEMITKGLIPSVATYNLLINGW 544
           +                      Q+ +E+       LF +MI +G IP +   + +I   
Sbjct: 842 L---------------------QQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDH 879

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           CK GN+D+A++ L  ++  +S      +Y  ++D LC  G+  +A+ L  EM+++G
Sbjct: 880 CKEGNLDKALM-LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 280/626 (44%), Gaps = 38/626 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +EA  +  ++   G+  PN  +Y+ L+  LCK   +D   + LK+M       D  T
Sbjct: 341 GNADEAFKMIKEMVAAGV-QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
              +++ +        A  + +E+ + G     + +SI++    + GE +KA +L+E M 
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ N   +  LI G+ ++  V  A ++FDKMTK     D   Y+ +I GL K  ++E
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 519

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            + + +++M+  G+ P+    S LI      G+L    + +    D     L  N ++ I
Sbjct: 520 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG---LKPNDVIYI 576

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                      +LL++  K + I  V      +    V  +   + I+I+ L   G ++ 
Sbjct: 577 -----------DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +   + + G + +V +Y++LI GLC +   E+++ +L EM + G  P     N++  
Sbjct: 626 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 685

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+  D+  A N+   +  +G  P     T LI   CK G    AF    +M+  G  P
Sbjct: 686 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D   YS    G      ++ A+ L  ++   G    + ++N ++ G CK  ++ E   L 
Sbjct: 746 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLL 804

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP---------DVITY 573
           + ++ +GL+P+  T   +I+G  ++G + +       + +K S S          D+I  
Sbjct: 805 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 864

Query: 574 TT--------LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
                     +I   C  G  D A+ML + +  K       +++A++  LC+  +   AL
Sbjct: 865 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 924

Query: 626 VHFRMMKEKG-MKPDMFVFVALISAF 650
              + M ++G ++P +   VAL+  F
Sbjct: 925 NLLKEMDKRGNLQPTL---VALLGIF 947



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 213/466 (45%), Gaps = 37/466 (7%)

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +SG  S  ++    + G     +   AL+ Y +++      +F+   K++    + G   
Sbjct: 202 RSGHGSQHSVLQRAVEGSAARGRHGSALEAYCKVR------EFDTAKKVLVEMRERG--- 252

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                      +NT+T   N ++  L  +G++++A+   + M       D G+       
Sbjct: 253 ---------CGLNTVTY--NVLIAGLCRSGAVEEAFGFKKDM------EDYGL------- 288

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  ++  +IN L K  + + A +L  EM+      NV +Y NLIDG       +E
Sbjct: 289 ---VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 345

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++++++EM  +G +P   T +++ R LC+   +  A  L+++M    H P      L+I+
Sbjct: 346 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 405

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
              +H    +AFR L++M   G  P++  YS  I GL      + A +L  ++   G  P
Sbjct: 406 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 465

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +   Y  +ISG C+   V+ A ++F++M    ++P +  YN LI G  K G ++++    
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           ++M E+    P+  TY+ LI G    G  + A  L   M + G  PN + ++ L+    K
Sbjct: 526 AQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
            D        F+ M ++G+  D  ++  LI    S  N   AF VL
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 630


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 269/592 (45%), Gaps = 54/592 (9%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C         ++R  G  GL  +A  L   +       P   SYN +LE L       + 
Sbjct: 125 CVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVA 184

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
                +M   G     YT   +++ +C   + D A S+  ++  HG V   + + +L+ A
Sbjct: 185 PNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHA 244

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            S+   V++A +L+E M       + +TF  +IHG  K  R+ +A +L D+M    F +D
Sbjct: 245 LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A +   ++ GLC+  +++ A  + S++                                 
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAMLSKIP-------------------------------- 332

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                N  T+L N+++   V +G  ++A +LL                 M+  G   P+ 
Sbjct: 333 -----NPNTVLYNTLINGYVVSGRFEEAKDLLYKN--------------MVIAG-FEPDA 372

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F+I+I+ L K G L  AL    EM + G   NV  Y  LIDG C     EE+ +++  
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G        N +   LC+   +  AL +  +M  +G +P +     LI  LCK+ K
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA     DM+ EG + + V Y+  I   + ++ +  A +L  ++   GC  D + YN 
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I  LCK     +   L  +M  + + PS+ + N+LIN +C++G ++ A+  L  M+++ 
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQR- 611

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             +PD++TY +LI+GLC  GR  +A+ L+N ++ KG  P+ +T+  LI+  C
Sbjct: 612 GLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 170/627 (27%), Positives = 279/627 (44%), Gaps = 70/627 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  LG+VG  +  + L  Q+K EG CV     +  ++    K+         L +M   
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEG-CVFKESLFILIMRYYGKAGLPGQATRLLLDM--- 155

Query: 96  GWGYDKYTLTPLLQVY------CNSGQFDK-ALSVFNEIIDHGWVDE-HVFSILLVAFSK 147
            WG   Y   P  + Y        +G   K A +VF +++  G     + F +++ AF  
Sbjct: 156 -WGV--YCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             EVD AC L+  M       N   + +LIH   + +RV++A++L ++M   G   D   
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           ++ +I GLCK  ++  A +L+  M                          LL       R
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRM--------------------------LL-------R 299

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           D     L+   +M  L   G +D+A    +AM+   P                +PNT  +
Sbjct: 300 DFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIP----------------NPNTVLY 339

Query: 328 DIIINTLLKDGKLDLALSL-FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + +IN  +  G+ + A  L ++ M   G   + F +N +IDGLC    L  + E L EM 
Sbjct: 340 NTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMV 399

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + GF+P   T   +    C++     A  +V  M  +G          LI  LCK GK  
Sbjct: 400 KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQ 459

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A +   +M  +G  PDI  +++ I GL    +++ AL L+RD+   G   + V YN +I
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
               + + + +A+ L  EM  +G      TYN LI   CK+G  ++ +  + +M  +E  
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI- 578

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P + +   LI+  C  G+ +DA+    +M ++G  P+ +T+ +LI GLCK  R + AL 
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
            F  ++ KG+ PD   +  LIS +  E
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYE 665



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 243/520 (46%), Gaps = 25/520 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G +++    V  V+ A  L   + + G CVPN+  Y  L+ AL ++  V+     L+E
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHG-CVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   D  T   ++   C +G+  +A  + + ++   +  D  +   L+    + G+
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL-FDKMTKSGFASDAAMYD 209
           VD+A  ++ ++ + N  L    +  LI+G+V   R ++A  L +  M  +GF  DA  ++
Sbjct: 321 VDEARAMLSKIPNPNTVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDR 267
           ++I GLCK   L  AL+   EM   G  P+    + LI     +G      K +     +
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            ++  T+  N ++  L  +G I  A  +   M                 KG   P+  +F
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSS---------------KG-CKPDIYTF 480

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +I  L K+ K++ AL L+R+M   G + N   YN LI        ++++ +L+ EM  
Sbjct: 481 NSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G    + T N + + LC+       L L+ +M  +   P +    +LI   C+ GK  +
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVND 600

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +FL DM+Q G  PDIV Y++ I GL  + R   AL LF  + A G  PD V YN +IS
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             C      +A  L  + ++ G IP+  T+++LIN + K+
Sbjct: 661 RYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 226/471 (47%), Gaps = 26/471 (5%)

Query: 186 VDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FE 241
           V  ++ LF+K   + G+     +Y ++I  L    + +M  +L  +MK  G       F 
Sbjct: 74  VPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFI 133

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           ++ +        G+ T L+ ++W            N ++ ILV+      A N+   M+ 
Sbjct: 134 LIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLS 193

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          +G +SP   +F +++       ++D A SL R+MT+ GC+ N  +
Sbjct: 194 ---------------RG-ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSII 237

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  LI  L  +NR+ E+ +LL EM   G +P   T N +   LC+   +  A  L  +M 
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++           L+  LC+ GK  EA   L+ +      P+ V Y+  I G +   R +
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFE 353

Query: 482 LALEL-FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            A +L ++++   G  PD   +NI+I GLCK   +  A +  +EM+ KG  P+V TY +L
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G+CK G+ ++A   ++ M  K   S + + Y  LI  LC  G+  DA+ ++ EM  KG
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAK-GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           C P+  TF +LI GLCK D+   AL  +R M  +G+  +   +  LI AFL
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL 523



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 5/343 (1%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF-LYNNLIDGLCNSNRLEESYELLR 383
           S F +I+    K G    A  L  +M  + C +  F  YN +++ L   N  + +  +  
Sbjct: 130 SLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFY 189

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M   G  PT +T   + +  C   +V  A +L+R M   G  P      +LI  L ++ 
Sbjct: 190 DMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENN 249

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  EA + L +M   G  PD+  ++  I GL    R+  A +L   +       D +   
Sbjct: 250 RVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQG 309

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ GLC+  +V EA      M++K   P+   YN LING+  SG  ++A   L + +  
Sbjct: 310 YLMHGLCRMGKVDEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PD  T+  +IDGLC  G    A+   +EM +KG  PN IT+  LI G CK      
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A      M  KG+  +   +  LI A   +     A ++  EM
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 289/628 (46%), Gaps = 45/628 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YNCL++A  K+  +D   +  +EM       D +TL       C  G++ +AL++
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +    +V + VF   L++   +    ++A + + RM   +   N  T+  L+ G + 
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++ + M   G      +++ ++   C +     A +L  +M   G  P + +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409

Query: 243 LSKLITS-CSDEGELTLLVKEIWEDRDVNTMT-------LLCNSIMRILVSNGSIDQAYN 294
            + LI S C D+  L   + ++ E      +        +  +S  R L S G  ++A++
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +++ MI                +G + P+TS++  ++N L    K++LA  LF EM + G
Sbjct: 470 VIREMIG---------------QGFI-PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  ++D  C +  +E++ +   EM E G  P   T  ++     + + V  A 
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI---------- 464
            L   M  +G  P +   + LI   CK G+  +A +    M     +PD+          
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633

Query: 465 ------VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                 V Y A + G     RV+ A +L   +   GC P+ + Y+ +I GLCK  ++ EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++  EM   G   ++ TY+ LI+ + K    D A   LS+MLE  S +P+V+ YT +ID
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMID 752

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  G+ D+A  L   MEEKGC PN +T+ A+I G     +    L     M  KG+ P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  LI          +A  +L+EM
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 281/642 (43%), Gaps = 80/642 (12%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L++ + +     + E  L++++D         L  L++ +C +G F  AL     + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D  +      ++ L+ AF K   +D A  +   M   N+R++  T     +   K  +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL L +      F  D   Y  +I GLC+    E A+   + M+ +   P+    S L+
Sbjct: 288 EALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL--------LCNSIMRILVSNGSIDQAYNLLQAM 299
             C ++ +L          R +N M +        + NS++    ++G    AY LL+ M
Sbjct: 345 CGCLNKKQLGRC------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K   +    V  ++I  G++  +  S +  +        LDLA   + EM   G + N 
Sbjct: 399 VKCGHMPGYVVYNILI--GSICGDKDSLNCDL--------LDLAEKAYSEMLAAGVVLNK 448

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              ++    LC++ + E+++ ++REM   GF P   T + +   LC    +  A  L  +
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+  G    V   T+++   CK G   +A ++  +M + G  P++V Y+A I   +  K+
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-------- 531
           V  A ELF  + + GC P++V Y+ +I G CKA +V +A  +F  M     +        
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 532 --------PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                   P+V TY  L++G+CKS  +++A   L  M   E   P+ I Y  LIDGLC  
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKV 687

Query: 584 GRPDDAIMLWNEMEEKG-----------------------------------CAPNRITF 608
           G+ D+A  +  EM E G                                   CAPN + +
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +I GLCK  +   A    +MM+EKG +P++  + A+I  F
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 163/650 (25%), Positives = 291/650 (44%), Gaps = 91/650 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-----SC 80
           C+ SP     L+    + G    A  L  ++ + G  +P    YN L+ ++C      +C
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNC 426

Query: 81  SV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
            + DL E    EM   G   +K  ++   +  C++G+++KA SV  E+I  G++ D   +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S +L       +++ A  L E M    +  +  T+ +++  F K   +++A + F++M +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   +   Y  +I    K K++  A +L+  M   G  P+    S LI     +G    
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI-----DGH--- 598

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                            C +        G +++A  + + M   + + DV +        
Sbjct: 599 -----------------CKA--------GQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           +  PN  ++  +++   K  +++ A  L   M+  GC  N  +Y+ LIDGLC   +L+E+
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693

Query: 379 YELLREMEESGFKPTHFTLNSM----FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E+  EM E GF  T +T +S+    F+   +RQD+  A  ++ KM      P V   T 
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKV--KRQDL--ASKVLSKMLENSCAPNVVIYTE 749

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK GK  EA++ +  M ++G  P++V Y+A I G   I +++  LEL   + + G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------ITKGL---------- 530
             P+ V Y ++I   CK   +  A +L  EM              + +G           
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869

Query: 531 ---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI-----TYTTL 576
                     P ++ Y LLI+   K+  ++ A+    R+LE+ +     +     TY +L
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL----RLLEEVATFSATLVDYSSTYNSL 925

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           I+ LC+A + + A  L++EM +KG  P   +F +LI GL +  +   AL+
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 234/532 (43%), Gaps = 73/532 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E A +LF+++KR GL V + Y+Y  ++++ CK+  ++       EM++ G   +  T T
Sbjct: 499 MELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V +S L+    K G+V+KAC++ ERM   
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        DD + R N  T+  L+ GF K  RV++A +L D M+  G   +  +Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           D +I GLCK  +L+ A ++ +EM   G        S LI                  DR 
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI------------------DRY 719

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                D A  +L  M++                 + +PN   + 
Sbjct: 720 FKV---------------KRQDLASKVLSKMLEN----------------SCAPNVVIYT 748

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+ L K GK D A  L + M + GC  NV  Y  +IDG     ++E   ELL  M   
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-ME 447
           G  P + T   +    C+   +  A NL+ +M+ Q H  W  H     K +    K  +E
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH--WPTHTAGYRKVIEGFNKEFIE 865

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNII 505
           +   L ++ Q+   P +  Y   I  LI  +R+++AL L  ++             YN +
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           I  LC A +V  A  LF+EM  KG+IP + ++  LI G  ++  I +A+L L
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 239/606 (39%), Gaps = 76/606 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L    L EEA M F    R   C+PN  +Y+ LL        +   +  L  M   
Sbjct: 308 LISGLCEASLFEEA-MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDK-A 154
           G          L+  YC SG    A  +  +++  G +  +V   +L+  S  G+ D   
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG-SICGDKDSLN 425

Query: 155 CELIE-------RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           C+L++        M    + LN+              + +KA  +  +M   GF  D + 
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++  LC   ++E+A  L+ EMK  G+  D    + ++ S    G +    K   E R
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V      C   +    +         L+ A +K + ++        +      PN  ++
Sbjct: 546 EVG-----CTPNVVTYTA---------LIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 328 DIIINTLLKDGKLDLALSLFREM----------------TQIGCMQNVFLYNNLIDGLCN 371
             +I+   K G+++ A  +F  M                       NV  Y  L+DG C 
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           S+R+EE+ +LL  M   G +P     ++                                
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDA-------------------------------- 679

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI  LCK GK  EA    T+M + GF   +  YS+ I     +KR DLA ++   + 
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            + C P+VV Y  +I GLCK  +  EA  L   M  KG  P+V TY  +I+G+   G I+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             +  L RM  K   +P+ +TY  LID  C  G  D A  L  EM++     +   +  +
Sbjct: 797 TCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 612 ITGLCK 617
           I G  K
Sbjct: 856 IEGFNK 861



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 142/358 (39%), Gaps = 49/358 (13%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           QIG      +YN L+D +   +  +   E L+++ +   +     LN + R  CR     
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIK---------------------------------- 437
            AL  + +++     P       LI+                                  
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 438 -ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK  EA   LT +  E F+PD V Y+  I GL +    + A++    + A  C 
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y+ ++ G    +++   + + N M+ +G  PS   +N L++ +C SG+   A   
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD--------AIMLWNEMEEKGCAPNRITF 608
           L +M+ K    P  + Y  LI  +C  G  D         A   ++EM   G   N+I  
Sbjct: 395 LKKMV-KCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    LC   +   A    R M  +G  PD   +  +++   +     LAF + +EM
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 289/628 (46%), Gaps = 45/628 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YNCL++A  K+  +D   +  +EM       D +TL       C  G++ +AL++
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +    +V + VF   L++   +    ++A + + RM   +   N  T+  L+ G + 
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++ +  ++ + M   G      +++ ++   C +     A +L  +M   G  P + +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409

Query: 243 LSKLITS-CSDEGELTLLVKEIWEDRDVNTMT-------LLCNSIMRILVSNGSIDQAYN 294
            + LI S C D+  L   + ++ E      +        +  +S  R L S G  ++A++
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +++ MI                +G + P+TS++  ++N L    K++LA  LF EM + G
Sbjct: 470 VIREMIG---------------QGFI-PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V+ Y  ++D  C +  +E++ +   EM E G  P   T  ++     + + V  A 
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI---------- 464
            L   M  +G  P +   + LI   CK G+  +A +    M     +PD+          
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633

Query: 465 ------VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                 V Y A + G     RV+ A +L   +   GC P+ + Y+ +I GLCK  ++ EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++  EM   G   ++ TY+ LI+ + K    D A   LS+MLE  S +P+V+ YT +ID
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMID 752

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  G+ D+A  L   MEEKGC PN +T+ A+I G     +    L     M  KG+ P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  LI          +A  +L+EM
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEM 840



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 281/642 (43%), Gaps = 80/642 (12%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L++ + +     + E  L++++D         L  L++ +C +G F  AL     + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D  +      ++ L+ AF K   +D A  +   M   N+R++  T     +   K  +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL L +      F  D   Y  +I GLC+    E A+   + M+ +   P+    S L+
Sbjct: 288 EALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL--------LCNSIMRILVSNGSIDQAYNLLQAM 299
             C ++ +L          R +N M +        + NS++    ++G    AY LL+ M
Sbjct: 345 CGCLNKKQLGRC------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K   +    V  ++I  G++  +  S +  +        LDLA   + EM   G + N 
Sbjct: 399 VKCGHMPGYVVYNILI--GSICGDKDSLNCDL--------LDLAEKAYSEMLAAGVVLNK 448

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              ++    LC++ + E+++ ++REM   GF P   T + +   LC    +  A  L  +
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+  G    V   T+++   CK G   +A ++  +M + G  P++V Y+A I   +  K+
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-------- 531
           V  A ELF  + + GC P++V Y+ +I G CKA +V +A  +F  M     +        
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 532 --------PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                   P+V TY  L++G+CKS  +++A   L  M   E   P+ I Y  LIDGLC  
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKV 687

Query: 584 GRPDDAIMLWNEMEEKG-----------------------------------CAPNRITF 608
           G+ D+A  +  EM E G                                   CAPN + +
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             +I GLCK  +   A    +MM+EKG +P++  + A+I  F
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 163/650 (25%), Positives = 291/650 (44%), Gaps = 91/650 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-----SC 80
           C+ SP     L+    + G    A  L  ++ + G  +P    YN L+ ++C      +C
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNC 426

Query: 81  SV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
            + DL E    EM   G   +K  ++   +  C++G+++KA SV  E+I  G++ D   +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S +L       +++ A  L E M    +  +  T+ +++  F K   +++A + F++M +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   +   Y  +I    K K++  A +L+  M   G  P+    S LI     +G    
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI-----DGH--- 598

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                            C +        G +++A  + + M   + + DV +        
Sbjct: 599 -----------------CKA--------GQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           +  PN  ++  +++   K  +++ A  L   M+  GC  N  +Y+ LIDGLC   +L+E+
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693

Query: 379 YELLREMEESGFKPTHFTLNSM----FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E+  EM E GF  T +T +S+    F+   +RQD+  A  ++ KM      P V   T 
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKV--KRQDL--ASKVLSKMLENSCAPNVVIYTE 749

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK GK  EA++ +  M ++G  P++V Y+A I G   I +++  LEL   + + G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------ITKGL---------- 530
             P+ V Y ++I   CK   +  A +L  EM              + +G           
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869

Query: 531 ---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI-----TYTTL 576
                     P ++ Y LLI+   K+  ++ A+    R+LE+ +     +     TY +L
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL----RLLEEVATFSATLVDYSSTYNSL 925

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           I+ LC+A + + A  L++EM +KG  P   +F +LI GL +  +   AL+
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 234/532 (43%), Gaps = 73/532 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E A +LF+++KR GL V + Y+Y  ++++ CK+  ++       EM++ G   +  T T
Sbjct: 499 MELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
            L+  Y  + +   A  +F  ++  G +   V +S L+    K G+V+KAC++ ERM   
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617

Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                        DD + R N  T+  L+ GF K  RV++A +L D M+  G   +  +Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           D +I GLCK  +L+ A ++ +EM   G        S LI                  DR 
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI------------------DRY 719

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                D A  +L  M++                 + +PN   + 
Sbjct: 720 FKV---------------KRQDLASKVLSKMLEN----------------SCAPNVVIYT 748

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+ L K GK D A  L + M + GC  NV  Y  +IDG     ++E   ELL  M   
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-ME 447
           G  P + T   +    C+   +  A NL+ +M+ Q H  W  H     K +    K  +E
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH--WPTHTAGYRKVIEGFNKEFIE 865

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNII 505
           +   L ++ Q+   P +  Y   I  LI  +R+++AL L  ++             YN +
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           I  LC A +V  A  LF+EM  KG+IP + ++  LI G  ++  I +A+L L
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 238/606 (39%), Gaps = 76/606 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L    L EEA M F    R   C+PN  +Y+ LL        +   +  L  M   
Sbjct: 308 LISGLCEASLFEEA-MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDK-A 154
           G          L+  YC SG    A  +  +++  G +  +V   +L+  S  G+ D   
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG-SICGDKDSLN 425

Query: 155 CELIE-------RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           C+L++        M    + LN+              + +KA  +  +M   GF  D + 
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++  LC   ++E+A  L+ EMK  G+  D    + ++ S    G +    K   E R
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V                  ++     L+ A +K + ++        +      PN  ++
Sbjct: 546 EVGC--------------TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 328 DIIINTLLKDGKLDLALSLFREM----------------TQIGCMQNVFLYNNLIDGLCN 371
             +I+   K G+++ A  +F  M                       NV  Y  L+DG C 
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           S+R+EE+ +LL  M   G +P     ++                                
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDA-------------------------------- 679

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI  LCK GK  EA    T+M + GF   +  YS+ I     +KR DLA ++   + 
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            + C P+VV Y  +I GLCK  +  EA  L   M  KG  P+V TY  +I+G+   G I+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             +  L RM  K   +P+ +TY  LID  C  G  D A  L  EM++     +   +  +
Sbjct: 797 TCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855

Query: 612 ITGLCK 617
           I G  K
Sbjct: 856 IEGFNK 861



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 142/358 (39%), Gaps = 49/358 (13%)

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           QIG      +YN L+D +   +  +   E L+++ +   +     LN + R  CR     
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIK---------------------------------- 437
            AL  + +++     P       LI+                                  
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 438 -ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK  EA   LT +  E F+PD V Y+  I GL +    + A++    + A  C 
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y+ ++ G    +++   + + N M+ +G  PS   +N L++ +C SG+   A   
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD--------AIMLWNEMEEKGCAPNRITF 608
           L +M+ K    P  + Y  LI  +C  G  D         A   ++EM   G   N+I  
Sbjct: 395 LKKMV-KCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +    LC   +   A    R M  +G  PD   +  +++   +     LAF + +EM
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 263/569 (46%), Gaps = 67/569 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +YN +L AL  + S+         M   G   + YT   L++  C  G   +ALS
Sbjct: 120 APSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  ++   G     V ++ L+ AF + GEVD+A  L++ M +  ++ N  TF  +++G  
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  R++ A ++FD+M K G A D   Y+ ++GG CK      AL +++EM   GI PD  
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI                                  ++   G++++A  L++ M  
Sbjct: 299 TFTSLI---------------------------------HVMCKAGNLERAVGLVREM-- 323

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                + G++M          N  +F  +I+   K G LD AL   REM Q     +V  
Sbjct: 324 ----RERGLQM----------NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+G C   R++E+ EL+REME  G KP   T +++    C+  D   A  L ++M 
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P     + LI+ LC+  +  +A     +M+  G  PD V Y++ I G      V+
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN--- 538
            AL L  ++   G  PDVV Y+++I+GL K+ R  EA+ L  ++  +  +P+   Y+   
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549

Query: 539 ------------LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                        L+ G+C  G +++A      +L++ + + D   Y+ LI G C  G  
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDR-NWNLDGSVYSVLIHGHCREGNV 608

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGL 615
             A+    +M + G APN  + ++LI GL
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGL 637



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 229/502 (45%), Gaps = 39/502 (7%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A + FD M   G A +   Y++++  LC     + AL +  +M+G+G  P+    + L+ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 249 SCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +    GE+    +  ++  +  +    +  NS++  +   G ++ A  +   M+K E +A
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK-EGLA 259

Query: 307 DVGV----------------EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
             GV                E L +F    +  + P+  +F  +I+ + K G L+ A+ L
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            REM + G   N   +  LIDG C    L+++   +REM +   +P+    N++    C 
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  LVR+M  +G +P V   + ++   CK+G    AF+    M++ G LPD + 
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAIT 439

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YS+ I  L + KR+  A  LF+++ + G  PD V Y  +I G CK   V  A  L +EM+
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT------------ 574
             G++P V TY++LING  KS    +A   L ++  +E   P  I Y             
Sbjct: 500 KAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP-VPANIKYDALMRCCRNAELK 558

Query: 575 ---TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
               L+ G C+ G  ++A  ++  + ++    +   +  LI G C+      AL   + M
Sbjct: 559 SVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQM 618

Query: 632 KEKGMKPDMFVFVALISAFLSE 653
            + G  P+    ++LI     +
Sbjct: 619 LQCGFAPNSTSTISLIRGLFEK 640



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 2/333 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  +++ ++   L D  L  A   F  M   G   NV+ YN L+  LC     +E+  
Sbjct: 120 APSVLAYNAVL-LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +LR+M  +G  P   T N++    CR  +V  A  LV  MR  G +P +     ++  +C
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  +A +   +MV+EG  PD V Y+  +GG   +     AL +F ++   G  PDVV
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +  +I  +CKA  +  A  L  EM  +GL  +  T+  LI+G+CK G +D A+L +  M
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            +     P V+ Y  LI+G C+ GR D+A  L  EME KG  P+ +T+  +++  CK   
Sbjct: 359 RQCRI-QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +A    + M E G+ PD   + +LI     E
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 247/563 (43%), Gaps = 45/563 (7%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           ++  R  R   L VL +D+  + C   P A+ +  L+      G V+ A  L D + REG
Sbjct: 166 ALCGRGHRKEALSVL-RDMRGAGC--DPNAVTYNTLVAAFCRAGEVDRAERLVDMM-REG 221

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
              PN  ++N ++  +CK+  ++       EM   G   D  +   L+  YC  G   +A
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEA 281

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           LSVF E+   G + + V F+ L+    K G +++A  L+  M +  +++NE TF  LI G
Sbjct: 282 LSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F KK  +D AL    +M +         Y+ +I G C   +++ A +L  EM+  G+ PD
Sbjct: 342 FCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401

Query: 240 FEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
               S ++++    G+      + +   +  V    +  +S++R+L     +  A+ L +
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI       +G++          P+  ++  +I+   K+G ++ ALSL  EM + G + 
Sbjct: 462 NMIS------LGLQ----------PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  Y+ LI+GL  S R +E+  LL ++      P +   +++ RC CR  ++   L   
Sbjct: 506 DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC-CRNAELKSVL--- 561

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
                            L+K  C  G   EA +    ++   +  D   YS  I G    
Sbjct: 562 ----------------ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCRE 605

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             V  AL   + +   G  P+  +   +I GL +   V EA+ +  +++    +      
Sbjct: 606 GNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEAS 665

Query: 538 NLLINGWCKSGNIDQAMLCLSRM 560
             LI+   K GN+D  +  L  M
Sbjct: 666 KALIDLNLKEGNVDAVLDVLHGM 688



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 241/555 (43%), Gaps = 76/555 (13%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            L+R L   G  +EA  +   ++  G C PN  +YN L+ A C++  VD  E  +  M++
Sbjct: 162 ILVRALCGRGHRKEALSVLRDMRGAG-CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMRE 220

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV----------------- 137
            G   +  T   ++   C +G+ + A  VF+E++  G   + V                 
Sbjct: 221 GGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHE 280

Query: 138 -------------------FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                              F+ L+    K G +++A  L+  M +  +++NE TF  LI 
Sbjct: 281 ALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID 340

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF KK  +D AL    +M +         Y+ +I G C   +++ A +L  EM+  G+ P
Sbjct: 341 GFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP 400

Query: 239 DFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    S ++++    G+      + +   +  V    +  +S++R+L     +  A+ L 
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + MI       +G++          P+  ++  +I+   K+G ++ ALSL  EM + G +
Sbjct: 461 KNMIS------LGLQ----------PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  Y+ LI+GL  S R +E+  LL ++      P +   +++ RC CR  ++   L L
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC-CRNAELKSVLAL 563

Query: 417 VRKMRVQG--------HEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGF 460
           ++   ++G        ++  +  N        ++LI   C+ G  M+A  F   M+Q GF
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGF 623

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNIIISGLCKAQRVAEA 518
            P+     + I GL +   V  A ++ + +    CC   D  A   +I    K   V   
Sbjct: 624 APNSTSTISLIRGLFEKGMVVEADQVIQQLL--NCCSLADAEASKALIDLNLKEGNVDAV 681

Query: 519 EDLFNEMITKGLIPS 533
            D+ + M   GL+PS
Sbjct: 682 LDVLHGMARDGLLPS 696



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 2/173 (1%)

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P V+AYN ++  L  A  +  A   F+ M++ G+ P+V TYN+L+   C  G+  +A
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L R +      P+ +TY TL+   C AG  D A  L + M E G  PN +TF +++ 
Sbjct: 177 LSVL-RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+CK  R   A   F  M ++G+ PD   +  L+  +        A  V  EM
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 302/627 (48%), Gaps = 23/627 (3%)

Query: 26   CFMSPGALG--FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
            C  SP        I   G  G   +A   ++ +K +G+ VP+  + N +L +L  S  + 
Sbjct: 410  CGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGI-VPDVAAANAVLYSLAGSGRLG 468

Query: 84   LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
            + +    E++  G   D  T T +++    + + D+A++ F+++++ G V D    + L+
Sbjct: 469  MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLI 528

Query: 143  VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
                K G+ ++A +L  ++ +  I     T+  L+ G  ++ +V + +QL ++MT++ + 
Sbjct: 529  DTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP 588

Query: 203  SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
             +   Y+ ++  L KN ++  A+ +   M   G  PD    + ++     E  L    + 
Sbjct: 589  PNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRM 648

Query: 263  IWEDRDV--NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
              + + +       LC +I+   V NG + +A + ++  I                K   
Sbjct: 649  FCQMKKILAPDYATLC-TILPSFVKNGLMKEALHTVKEYI---------------LKAGC 692

Query: 321  SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            + + SSF  ++  +LK   ++ ++     +   G + N F    LI  LC   +  E+++
Sbjct: 693  NVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQ 752

Query: 381  LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            L  + +  G      + NS+ R L     +  A +L  +M+  G  P      L++  + 
Sbjct: 753  LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 812

Query: 441  KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            K  +  E  +   +M ++G+    V Y+  I GL+  KR++ A++L+ ++ + G  P   
Sbjct: 813  KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 872

Query: 501  AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             Y  ++ GL K+ ++ +AE+LFNEM+  G  P+   YN+L+NG   +GN +       +M
Sbjct: 873  TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932

Query: 561  LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            +E +  +PD+ +YT LID LC AGR +D +  + ++ E G  P+ I +  LI GL K +R
Sbjct: 933  VE-QGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSER 991

Query: 621  PRAALVHFRMMKEKGMKPDMFVFVALI 647
               A+  F  MK+KG+ P+++ + +LI
Sbjct: 992  IEEAVSLFNEMKKKGIIPNLYTYNSLI 1018



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 157/631 (24%), Positives = 270/631 (42%), Gaps = 56/631 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  G VG   +   +FD ++++ +   N  ++  +   +     +    + L  M++ 
Sbjct: 110 LMRAHGRVG---DMAQVFDLMQKQ-VVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREA 165

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + YT   L+     SG   +A+ V+  +++ G       +S+L+VAF K  +VD  
Sbjct: 166 GMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTV 225

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   ++ N  ++ + I    + +R D+A  +  KM  SG   D   + VII  
Sbjct: 226 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQV 285

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   +L  A  ++ +MK S   PD      L+  C D G+   +V E+W          
Sbjct: 286 LCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVV-EVW---------- 334

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                      N  +   YN                            N  S+  +++ L
Sbjct: 335 -----------NAMVADGYN---------------------------DNIVSYTAVVDAL 356

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G++D AL++F EM + G     + YN+LI G   ++  + + EL   M   G  P  
Sbjct: 357 CQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 416

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T         +    + A+     M+ +G  P V     ++  L   G+   A R   +
Sbjct: 417 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYE 476

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  PD + Y+  I       + D A+  F D+   GC PDV+A N +I  L K  +
Sbjct: 477 LKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  LF+++    + P+  TYN L++G  + G + + M  L  M  +    P++ITY 
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM-TRTIYPPNLITYN 595

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T++D L   G  + AI +   M EKGCAP+  ++  ++ GL K +R   A   F  MK K
Sbjct: 596 TVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-K 654

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            + PD      ++ +F+       A   +KE
Sbjct: 655 ILAPDYATLCTILPSFVKNGLMKEALHTVKE 685



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/654 (23%), Positives = 284/654 (43%), Gaps = 58/654 (8%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG     +EA  +  +++  G C P+  ++  +++ LC +  +   +    +M+   
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSG-CKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASD 306

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   LL    +SG     + V+N ++  G+ D  V ++ ++ A  + G VD+A 
Sbjct: 307 QKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEAL 366

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            + + M +  +   + ++  LI GF+K    D+AL+LF+ M   G + +   + + I   
Sbjct: 367 AVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY 426

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR--DVNTMT 273
            K+ Q   A+Q Y  MK  GI PD    + ++ S +  G L +  +  +E +   V+  T
Sbjct: 427 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +    +++        D+A N    M++                G V P+  + + +I+T
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVE---------------SGCV-PDVLALNSLIDT 530

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K GK + A  LF ++ ++        YN L+ GL    +++E  +LL EM  + + P 
Sbjct: 531 LYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPN 590

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++  CL +  +V  A++++  M  +G  P +     ++  L K  +  EAFR   
Sbjct: 591 LITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFC 650

Query: 454 DM------------------VQEGFLP-----------------DIVCYSAAIGGLIDIK 478
            M                  V+ G +                  D   + + + G++   
Sbjct: 651 QMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKA 710

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            V+ ++E   +I + G   +      +I  LCK ++  EA  LFN+    G+     +YN
Sbjct: 711 GVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 770

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI G      ID A    + M     G PD  TY  ++D +  + R ++ + +  EM  
Sbjct: 771 SLIRGLVDENLIDIAEDLFTEMKRLGCG-PDEFTYNLILDAMGKSMRVEEMLKVQKEMHR 829

Query: 599 KGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAFL 651
           KG     +T+  +I+GL K  R   A+ +++ +M E G  P    +  L+   L
Sbjct: 830 KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSE-GFSPTPCTYGPLLDGLL 882



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 230/533 (43%), Gaps = 21/533 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  + LN  T+  LI+  VK     +A++++  M
Sbjct: 138 TFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAM 197

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
            + G +     Y V++    K + ++  L L +EM+  G+ P+   + I  +++   +  
Sbjct: 198 VEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARF 257

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
            E   ++ ++ ED       +    I+++L   G +  A  +   M   +   D    + 
Sbjct: 258 DEAYHILGKM-EDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYIT 316

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           ++ K   S ++ S   + N ++ DG  D                N+  Y  ++D LC   
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYND----------------NIVSYTAVVDALCQVG 360

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R++E+  +  EM+E G  P  ++ NS+     +      AL L   M   G  P    + 
Sbjct: 361 RVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 420

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I    K G++++A +    M  +G +PD+   +A +  L    R+ +A  +F ++ A 
Sbjct: 421 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM 480

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD + Y ++I    KA +  EA + F++M+  G +P V   N LI+   K G  ++A
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                ++ E +   P   TY TL+ GL   G+  + + L  EM      PN IT+  ++ 
Sbjct: 541 WQLFHKLKEMKI-EPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L K      A+     M EKG  PD+  +  ++   + E     AF +  +M
Sbjct: 600 CLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 255/586 (43%), Gaps = 66/586 (11%)

Query: 3    SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEA-NMLFDQVKRE 59
            S L R  ++  +  L +++  +R    P  + +  ++ CL   G V  A +ML+   ++ 
Sbjct: 564  SGLGREGKVKEVMQLLEEM--TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKG 621

Query: 60   GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
              C P+  SYN ++  L K   ++       +M+      D  TL  +L  +  +G   +
Sbjct: 622  --CAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKE 678

Query: 120  ALSVFNEIIDHGW--VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            AL    E I      VD+  F  L+    K   V+K+ E  E +    I LN+   C LI
Sbjct: 679  ALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLI 738

Query: 178  HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
                K  +  +A QLF+K    G +     Y+ +I GL     +++A  L++EMK  G  
Sbjct: 739  RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798

Query: 238  PDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            PD E    LI     +    E  L V++    +   +  +  N+I+  LV +  ++QA +
Sbjct: 799  PD-EFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAID 857

Query: 295  LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            L   ++                    SP   ++  +++ LLK GK+  A +LF EM + G
Sbjct: 858  LYYNLMSE----------------GFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYG 901

Query: 355  CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            C  N  +YN L++G   +   E   +L  +M E                           
Sbjct: 902  CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVE--------------------------- 934

Query: 415  NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                    QG  P +K  T+LI  LC  G+  +   +   + + G  PD++ Y+  I GL
Sbjct: 935  --------QGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986

Query: 475  IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               +R++ A+ LF ++   G  P++  YN +I  L KA + AEA  ++ E++ KG  PSV
Sbjct: 987  GKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSV 1046

Query: 535  ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
             TYN LI G+  SG+ D A     +M+      P+  TY  L + L
Sbjct: 1047 FTYNALIRGYSVSGSTDNAYAAYGQMIVG-GCQPNSSTYMQLPNQL 1091



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 25/425 (5%)

Query: 246 LITSCSDEGE-LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIK 301
           ++ S  D  E L L      +   V+T T  CN ++ ++ ++G +    Q ++L+Q    
Sbjct: 74  MLRSAPDPAEALELFTAAARQPTKVHT-TESCNYMLELMRAHGRVGDMAQVFDLMQ---- 128

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          K  V  N  +F  I   +  +G L  A      M + G   N + 
Sbjct: 129 ---------------KQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYT 173

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI  L  S    E+ E+ + M E G  P+  T + +     +++DV   L L+ +M 
Sbjct: 174 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G +P V   T+ I+ L +  +  EA+  L  M   G  PD+V ++  I  L D  R+ 
Sbjct: 234 ARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLS 293

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  + A    PD V Y  ++     +       +++N M+  G   ++ +Y  ++
Sbjct: 294 DAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVV 353

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +  C+ G +D+A+     M EK   SP+  +Y +LI G   A   D A+ L+N M   G 
Sbjct: 354 DALCQVGRVDEALAVFDEMKEK-GMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGP 412

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           +PN  T +  I    K  +   A+  +  MK KG+ PD+    A++ +        +A  
Sbjct: 413 SPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKR 472

Query: 662 VLKEM 666
           V  E+
Sbjct: 473 VFYEL 477


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 283/638 (44%), Gaps = 47/638 (7%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V   C  +  +   LI     +  V++A  LF+++ R+ L  PN  +YN L+  LC   
Sbjct: 281 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL-TPNTVTYNTLIHGLCHVG 339

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
            +        EM   G   D  T   L    C +   DKA+++   I    W  D  +++
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 399

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            +L    + GE++ A +L   +    ++ N  T+ ++IHG  K+  + +A +LF +M K+
Sbjct: 400 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 459

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           G + +   Y++I  G  +N +    ++L  EM   G + D    + L+   SD+G L   
Sbjct: 460 GCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQS 518

Query: 260 VKEIW-----EDRDVNTMTLLCNSIMRILVSN---------GSIDQAYNLLQAMIKGEPI 305
           VK+I        R   T       +      N          ++D A +    M+   P 
Sbjct: 519 VKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHP- 577

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           P+T  F  ++ ++ K       LSL  +M   G   +V+  N L
Sbjct: 578 ---------------PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 622

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I+  C+  RL  ++ +L ++ + GF+P   T  ++   LC             KM  +G 
Sbjct: 623 INSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGI 669

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +     LI  LC   +       L +MV    +P++V +S  +  L     + +A +
Sbjct: 670 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 729

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +   +   G  PDVV Y  ++ G C    + EA  +F+ M+ KG +P+V +YN+LING+C
Sbjct: 730 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 789

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +   +D+AM  L +M   +    D +TY TLI GLC  GR   AI L++EM   G  P+ 
Sbjct: 790 QIQRMDKAMGLLEQM-SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           +T+  L+  LCK      A+V  + ++   +  D+ V+
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 230/487 (47%), Gaps = 27/487 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D+AL  F++M           ++ ++  + K K     L L  +M   GI PD   L+ 
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 246 LITSCSD----EGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           +I S       +   + L K  ++    D  T T    +++R L   G I +A +L   M
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFT----TLIRGLCVEGKIGEALHLFDKM 141

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I GE                  PN  ++  +IN L KD ++  A ++F EM   G   N+
Sbjct: 142 I-GEGF---------------QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNI 185

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN+LI GLC     +    L+ EM +S   P  FTLN++   LC+   V  A ++V  
Sbjct: 186 VTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDM 245

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G EP V     L+   C   +   A +    MV +  + +++ Y+  I G   I+ 
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           VD A+ LF ++      P+ V YN +I GLC   R+ +A  LF+EM+ +G IP + TY  
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L +  CK+ ++D+AM  L + +E  +  PD+  YTT++DG+C AG  +DA  L++ +  K
Sbjct: 366 LSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 424

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  PN  T+  +I GLCK      A   F  M + G  P+   +  +   FL        
Sbjct: 425 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 484

Query: 660 FEVLKEM 666
            E+L+EM
Sbjct: 485 IELLEEM 491



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 279/655 (42%), Gaps = 107/655 (16%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K+     +    ++M  +G   D YTL  ++   C+  + D A S 
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +I+                  K G    A                 TF  LI G   +
Sbjct: 103 LAKIL------------------KLGHQPDA----------------TTFTTLIRGLCVE 128

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +AL LFDKM   GF  +   Y  +I GLCK++Q+  A  ++SEM   GI+P+    
Sbjct: 129 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTY 188

Query: 244 SKLITS-CS--DEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + LI   C   +   +T L+ E+ + +   DV T+    N+++  L   G + +A++++ 
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL----NTVVDALCKEGMVAEAHDVVD 244

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                          +MI +G V PN  +++ +++      ++D+A+ +F  M    C+ 
Sbjct: 245 ---------------MMIHRG-VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           NV  YN LI+G C    ++++  L  EM      P   T N++   LC    +  A++L 
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M  +G  P +     L   LCK+    +A   L  +    + PDI  Y+  + G+   
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             ++ A +LF ++ + G  P+V  YNI+I GLCK   +AEA  LF+EM   G  P+  TY
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI-----DGL-----------C 581
           NL+  G+ ++    + +  L  ML +   S DV T T L+     DGL            
Sbjct: 469 NLITRGFLRNNEALRTIELLEEMLAR-GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPS 527

Query: 582 IAGRP------------------------------DDAIMLWNEMEEKGCAPNRITFMAL 611
            + RP                              DDA+  +N M      P+ + F  L
Sbjct: 528 SSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKL 587

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +T + K       L     M   G+ PD++    LI++F        AF VL ++
Sbjct: 588 LTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 642



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 270/612 (44%), Gaps = 37/612 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+ A  +FD +  +  CV N  SYN L+   CK  SVD      +EM       +  T  
Sbjct: 271 VDVAVKVFDTMVHKD-CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 329

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C+ G+   A+S+F+E++  G + + V +  L     K   +DKA  L++ ++  
Sbjct: 330 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 389

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N   + + +  ++ G  +   ++ A  LF  ++  G   +   Y+++I GLCK   L  A
Sbjct: 390 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 449

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-------DVNTMTLLCN 277
            +L+SEM  +G +P+ +    LIT         L   E+ E+        DV+T TLL  
Sbjct: 450 SKLFSEMNKNGCSPN-DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 508

Query: 278 SIMRILVSNGSIDQAYN--LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
                ++S+  +DQ+    L +      P       +  +F  +   +  S     NTL 
Sbjct: 509 -----MLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTL- 562

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
                D ALS F  M  +    +   +  L+  +           L  +M+  G  P  +
Sbjct: 563 -----DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 617

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           TLN +    C  + +  A +++ K+   G +P V     L+  LCK             M
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------M 664

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           + +G  PDI  Y++ I  L ++        L  ++      P+VV ++ ++  LCK   +
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           A A D+ + MI +G+ P V TY  L++G C    +D+A+     M+ K    P+V +Y  
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK-GCVPNVRSYNI 783

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI+G C   R D A+ L  +M  +G   + +T+  LI GLC   R + A+  F  M   G
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843

Query: 636 MKPDMFVFVALI 647
             PD+  +  L+
Sbjct: 844 QIPDLVTYRILL 855



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 172/687 (25%), Positives = 281/687 (40%), Gaps = 87/687 (12%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L     V EA  +F ++  +G+  PN  +YN L+  LCK C    V   + EM 
Sbjct: 154 GTLINGLCKDRQVTEAFNIFSEMITKGIS-PNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEV 151
           D     D +TL  ++   C  G   +A  V + +I  G V+ +V  ++ L+       EV
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG-VEPNVVTYNALMDGHCLRNEV 271

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D A ++ + M   +   N  ++  LI+G+ K   VDKA+ LF++M++     +   Y+ +
Sbjct: 272 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 331

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEI----W 264
           I GLC   +L+ A+ L+ EM   G  PD   +  LS  +       +   L+K I    W
Sbjct: 332 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 391

Query: 265 EDRDVNTMTLLCNSIMRI--------LVSNGSIDQ------AYNLL-QAMIKGEPIADVG 309
            D D+   T + + + R         L SN S          YN++   + K   +A+  
Sbjct: 392 -DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 450

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI--- 366
                + K   SPN  ++++I    L++ +    + L  EM   G   +V     L+   
Sbjct: 451 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 510

Query: 367 --DGLCNS-----------------------------------------NRLEESYELLR 383
             DGL  S                                         N L+++     
Sbjct: 511 SDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFN 570

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M      P+      +   + + +     L+L  +M   G  P V    +LI   C   
Sbjct: 571 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 630

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   AF  L  +++ GF PD+V Y   + GL  +                G  PD+  YN
Sbjct: 631 RLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM-------------ITKGISPDIFTYN 677

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I  LC          L NEM+   ++P+V  ++ +++  CK G I  A   +  M+ K
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI-K 736

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PDV+TYT L+DG C+    D+A+ +++ M  KGC PN  ++  LI G C+  R   
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+     M  +G+  D   +  LI   
Sbjct: 797 AMGLLEQMSLQGLIADTVTYNTLIHGL 823



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 286/674 (42%), Gaps = 92/674 (13%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A  F  LIR L   G + EA  LFD++  EG   PN  +Y  L+  LCK   V     
Sbjct: 113 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF-QPNVVTYGTLINGLCKDRQVTEAFN 171

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV--AF 145
              EM   G   +  T   L+   C   ++    ++ NE++D   + + VF++  V  A 
Sbjct: 172 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD-VFTLNTVVDAL 230

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G V +A ++++ M    +  N  T+  L+ G   ++ VD A+++FD M      ++ 
Sbjct: 231 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 290

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVK 261
             Y+ +I G CK + ++ A+ L+ EM    +TP+    + LI      G L    +L  +
Sbjct: 291 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 350

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
            +   +  + +T    ++   L  N  +D+A  LL+A I+G                   
Sbjct: 351 MVARGQIPDLVTY--RTLSDYLCKNRHLDKAMALLKA-IEG---------------SNWD 392

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   +  I++ + + G+L+ A  LF  ++  G   NV+ YN +I GLC    L E+ +L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI----- 436
             EM ++G  P   T N + R   R  + +  + L+ +M  +G    V   TLL+     
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 437 --------KELCK-------HGKAMEA-------------------FRFLTD-------M 455
                   + LCK        G  M +                   F  L D       M
Sbjct: 513 DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM 572

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +     P  V ++  +  +  +K     L L   + + G  PDV   NI+I+  C  +R+
Sbjct: 573 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 632

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  +  +++  G  P V TY  L+NG CK             M+ K   SPD+ TY +
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITK-GISPDIFTYNS 678

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH--FRMMKE 633
           LI  LC          L NEM      PN + F  ++  LCK      A+ H    MM +
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK--EGMIAIAHDVVDMMIK 736

Query: 634 KGMKPDMFVFVALI 647
           +G++PD+  + AL+
Sbjct: 737 RGVEPDVVTYTALM 750



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 138/542 (25%), Positives = 239/542 (44%), Gaps = 23/542 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E+A  LF  +  +GL  PN ++YN ++  LCK   +        EM   G   +  T
Sbjct: 409 GELEDARDLFSNLSSKGL-QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELI----- 158
              + + +  + +  + + +  E++  G+  +   + LLV       +D++ + I     
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPS 527

Query: 159 --ERMDDCNIRLNEKTFCVLIHGFVKK-----SRVDKALQLFDKMTKSGFASDAAMYDVI 211
              R     +R     F    H  +       + +D AL  F++M           +  +
Sbjct: 528 SSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKL 587

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVK--EIWE 265
           +  + K K     L L ++M   GI PD   L+ LI S      L    ++L K  ++  
Sbjct: 588 LTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGF 647

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
             DV T   L N + +++    S D   YN L+ A+        V   +  +    + PN
Sbjct: 648 QPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 707

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              F  +++ L K+G + +A  +   M + G   +V  Y  L+DG C  + ++E+ ++  
Sbjct: 708 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 767

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKH 442
            M   G  P   + N +    C+ Q +  A+ L+ +M +QG     V +NTL I  LC  
Sbjct: 768 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL-IHGLCHV 826

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+   A     +MV  G +PD+V Y   +  L     +  A+ L + I       D++ Y
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI I G+C+A  +  A DLF+ + +KGL P V TYN++I+G CK G +D+A     +M E
Sbjct: 887 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946

Query: 563 KE 564
            +
Sbjct: 947 ND 948



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 36/313 (11%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N L+E+      M      P+    N +   + + +     L+L R+M   G  P V   
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++I  LC   +   AF  L  +++ G  PD   ++  I GL    ++  AL LF  +  
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING------W-- 544
            G  P+VV Y  +I+GLCK ++V EA ++F+EMITKG+ P++ TYN LI+G      W  
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203

Query: 545 ---------------------------CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
                                      CK G + +A   +  M+ +    P+V+TY  L+
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALM 262

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG C+    D A+ +++ M  K C  N I++  LI G CK      A+  F  M  + + 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 638 PDMFVFVALISAF 650
           P+   +  LI   
Sbjct: 323 PNTVTYNTLIHGL 335



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 2/192 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +FD +  +G CVPN  SYN L+   C+   +D     L++M   G   D  T  
Sbjct: 759 MDEAVKVFDTMVHKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 817

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C+ G+   A+++F+E++  G + + V + ILL    K   + +A  L++ ++  
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N+  +   + + I G  +   ++ A  LF  ++  G   D   Y+++I GLCK   L+ A
Sbjct: 878 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 937

Query: 225 LQLYSEMKGSGI 236
            +L+ +M  + I
Sbjct: 938 NKLFRKMDENDI 949


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/555 (29%), Positives = 265/555 (47%), Gaps = 24/555 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    ++ L  A+ K+   DLV    K+M+  G  ++ YTL+ ++  +C   +   A S
Sbjct: 85  LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              +II  G+    + FS L+      G V +A EL++RM +   + +  T   L++G  
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              +  +A+ L DKM + G   +A  Y  ++  +CK+ Q  +A++L  +M+   I  D  
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 242 ILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             S +I      G L     L  E+ E + + T  +  N ++    + G  D    LL+ 
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MIK +                ++PN  +F ++I++ +K+GKL  A  L +EM   G   +
Sbjct: 324 MIKRK----------------INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y +LIDG C  N L+++ +++  M   G  P   T N +    C+   +   L L R
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 419 KMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           KM ++G     V +NT LI+  C+ GK   A     +MV     P+IV Y   + GL D 
Sbjct: 428 KMSLRGVVADTVTYNT-LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              + ALE+F  I       D+  YNIII G+C A +V +A DLF  +  KG+ P V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N++I G CK G + +A L L R +E++  +PD  TY  LI      G    ++ L  E++
Sbjct: 547 NIMIGGLCKKGPLSEAEL-LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605

Query: 598 EKGCAPNRITFMALI 612
             G + +  T   +I
Sbjct: 606 RCGFSVDASTIKMVI 620



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 262/554 (47%), Gaps = 24/554 (4%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+ +F ++I    +   + FS L  A +K  + D    L ++M+   I  N  T  ++
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  ++  A     K+ K G+  +   +  +I GLC   ++  AL+L   M   G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 237 TPDFEILSKLITS---CSDEGELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQA 292
            PD   ++ L+        E E  LL+ ++ E     N +T     ++ ++  +G    A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY--GPVLNVMCKSGQTALA 247

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL+ M                 +  +  +   + III+ L K G LD A +LF EM  
Sbjct: 248 MELLRKM----------------EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   N+  YN LI G CN+ R ++  +LLR+M +    P   T + +     +   +  
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L ++M  +G  P     T LI   CK     +A + +  MV +G  P+I  ++  I 
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G     R+D  LELFR +   G   D V YN +I G C+  ++  A++LF EM+++ + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           ++ TY +L++G C +G  ++A+    + +EK     D+  Y  +I G+C A + DDA  L
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +  +  KG  P   T+  +I GLCK      A + FR M+E G  PD + +  LI A L 
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590

Query: 653 ELNPPLAFEVLKEM 666
           + +   + ++++E+
Sbjct: 591 DGDATKSVKLIEEL 604



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 1/319 (0%)

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           L D K D A+ LFR+M     +  V  ++ L   +  + + +    L ++ME  G     
Sbjct: 64  LVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +TL+ M  C CR + +  A + + K+   G+EP     + LI  LC  G+  EA   +  
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+ G  PD++  +  + GL    +   A+ L   +  +GC P+ V Y  +++ +CK+ +
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
            A A +L  +M  + +      Y+++I+G CK G++D A    + M E +  + ++ITY 
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYN 302

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI G C AGR DD   L  +M ++   PN +TF  LI    K  + R A    + M  +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362

Query: 635 GMKPDMFVFVALISAFLSE 653
           G+ PD   + +LI  F  E
Sbjct: 363 GIAPDTITYTSLIDGFCKE 381



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 201/439 (45%), Gaps = 26/439 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   EA +L D++   G C PN  +Y  +L  +CKS    L    L++M++     D   
Sbjct: 207 GKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C  G  D A ++FNE+   G     + ++IL+  F   G  D   +L+  M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I  N  TF VLI  FVK+ ++ +A +L  +M   G A D   Y  +I G CK   L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
            A Q+   M   G  P+    + LI   C     D+G L L  K     R V   T+  N
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG-LELFRK--MSLRGVVADTVTYN 442

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++++     G ++ A  L Q M+  +                V PN  ++ I+++ L  +
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRK----------------VPPNIVTYKILLDGLCDN 486

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+ + AL +F ++ +     ++ +YN +I G+CN+++++++++L   +   G KP   T 
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N M   LC++  +  A  L RKM   GH P      +LI+     G A ++ + + ++ +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606

Query: 458 EGFLPDIVCYSAAIGGLID 476
            GF  D       I  L D
Sbjct: 607 CGFSVDASTIKMVIDMLSD 625



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 168/359 (46%), Gaps = 26/359 (7%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++ A  LF++++ +G+   N  +YN L+   C +   D     L++M       +  T
Sbjct: 277 GSLDNAFNLFNEMEMKGI-TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L+  +   G+  +A  +  E+I  G   D   ++ L+  F K   +DKA ++++ M 
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 N +TF +LI+G+ K +R+D  L+LF KM+  G  +D   Y+ +I G C+  +L 
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSI 279
           +A +L+ EM    + P+      L+    D GE    + EI+E  + + M L   + N I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL-EIFEKIEKSKMELDIGIYNII 514

Query: 280 MRILVSNGSIDQAYNL-------------------LQAMIKGEPIADVGVEMLMIFKGTV 320
           +  + +   +D A++L                   +  + K  P+++  +    + +   
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +P+  +++I+I   L DG    ++ L  E+ + G   +      +ID L +  RL++S+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG-RLKKSF 632


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 162/606 (26%), Positives = 285/606 (47%), Gaps = 45/606 (7%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN L++   ++  +D   +  +EM + G+  D  TL       C +G+   ALS+  + 
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK- 265

Query: 128 IDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               +V + VF   +V+   +     +A ++++RM   +   N  T+ +L+ G + K ++
Sbjct: 266 --EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL 323

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            +  ++   M   G   +  M++ ++   CK++    A +L+ +M   G  P + + +  
Sbjct: 324 GRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383

Query: 247 ITS-CSDE----GELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           I S CS+E     +L  L ++ +    D  V    +  ++  R L   G  D+A+ ++  
Sbjct: 384 IGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M+                KG V P+ S++  +I  L    K++ A  LF EM + G + +
Sbjct: 444 MMS---------------KGFV-PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPS 487

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V+ Y  LID  C +  ++++     EM      P   T  S+     + + V  A  L  
Sbjct: 488 VYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFE 547

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV----------------QEGFLP 462
            M ++G +P V   T LI   CK G+  +A +    M                  +   P
Sbjct: 548 MMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETP 607

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +I+ Y A + GL    RV+ A EL   +  +GC P+ + Y+ +I G CK  ++  A+++F
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +M  +G  P++ TY+ LIN   K   +D  +  LS+MLE  S +P+V+ YT +IDGLC 
Sbjct: 668 VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN-SCTPNVVIYTDMIDGLCK 726

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ ++A  L  +MEE GC PN IT+ A+I G  K  +    L  +R M  KG  P+   
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 643 FVALIS 648
           +  LI+
Sbjct: 787 YRVLIN 792



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 266/622 (42%), Gaps = 76/622 (12%)

Query: 69  YNCLLEALC-KSCSVDLVEMR-LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YN L+E LC  + + D V  + L +++D      +  L  L+Q  C +G ++ AL     
Sbjct: 136 YNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGR 195

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           + D G+      ++ L+  F +  ++D A  +   M +   R++  T     +   K  R
Sbjct: 196 LKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGR 255

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
              AL L +K     F  D   Y+ ++ GLC+    + A+ +   M+     P+      
Sbjct: 256 CGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRI 312

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           L++ C  +G+L                   C  I+ ++++ G                  
Sbjct: 313 LLSGCLGKGQLGR-----------------CKRILSMMMTEGCY---------------- 339

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           PN   F+ +++   K      A  LF++M + GC     LYN  
Sbjct: 340 ----------------PNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383

Query: 366 IDGLCN------SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           I  +C+      S+ LE + +   EM + G       +++  RCLC       A  ++ +
Sbjct: 384 IGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P     + +I  LC   K  +AF    +M + G +P +  Y+  I        
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL 503

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A   F ++    C P+VV Y  +I    KA++V +A  LF  M+ +G  P+V TY  
Sbjct: 504 IQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTA 563

Query: 540 LINGWCKSGNIDQAMLCLSRML---------------EKESGSPDVITYTTLIDGLCIAG 584
           LI+G CK+G ID+A    +RM                + +  +P++ITY  L+DGLC A 
Sbjct: 564 LIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN 623

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R ++A  L + M   GC PN+I + ALI G CK  +   A   F  M E+G  P+++ + 
Sbjct: 624 RVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYS 683

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           +LI++   E    L  +VL +M
Sbjct: 684 SLINSLFKEKRLDLVLKVLSKM 705



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/678 (26%), Positives = 299/678 (44%), Gaps = 83/678 (12%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           IL R R I+ +     +VV  R  +S         CLG  G +     +   +  EG C 
Sbjct: 294 ILDRMRSISCI----PNVVTYRILLSG--------CLGK-GQLGRCKRILSMMMTEG-CY 339

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQF---- 117
           PN   +N L+ A CKS          K+M   G   GY  Y +   +   C++ +     
Sbjct: 340 PNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNI--FIGSICSNEELPGSD 397

Query: 118 --DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
             + A   ++E++D G V   V  S         G+ DKA E+I  M       ++ T+ 
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +I      S+V+KA  LF++M K+G       Y ++I   CK   ++ A   + EM   
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD 517

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN-------- 286
             TP+    + LI +        L  +++++   +  M LL  S   ++           
Sbjct: 518 NCTPNVVTYTSLIHA-------YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 287 -GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G ID+A  +   M      +D+ +   +      +PN  ++  +++ L K  +++ A  
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M+  GC  N  +Y+ LIDG C + +LE + E+  +M E G+ P  +T +S+   L 
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + + +   L ++ KM      P V   T +I  LCK GK  EA+R +  M + G  P+++
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVI 750

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A I G   I +++  LEL+RD+C+ GC P+ + Y ++I+  C    + EA  L +EM
Sbjct: 751 TYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810

Query: 526 --------------ITKGL-------------------IPSVATYNLLINGWCKSGNIDQ 552
                         I +G                    +P  + Y +LI+ + K+G ++ 
Sbjct: 811 KQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEG 870

Query: 553 AMLCLSRMLEKESGSPDVIT-----YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           A+     +LE+ S SP +       YT+LI+ L  A + D A  L+  M  K   P   T
Sbjct: 871 AL----NLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELST 926

Query: 608 FMALITGLCKCDRPRAAL 625
           F+ LI GL +  + + AL
Sbjct: 927 FVHLIKGLTRVGKWQEAL 944



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 230/499 (46%), Gaps = 44/499 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A +LF+++K+ G+ VP+ Y+Y  L+++ CK+  +        EM       +  T T
Sbjct: 469 VEKAFLLFEEMKKNGI-VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYT 527

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD-- 162
            L+  Y  + +   A  +F  ++  G     V ++ L+    K G++DKAC++  RM   
Sbjct: 528 SLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGD 587

Query: 163 ------DCNIRLNEK--------TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                 D   +L++         T+  L+ G  K +RV++A +L D M+ +G   +  +Y
Sbjct: 588 IESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVY 647

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--D 266
           D +I G CK  +LE A +++ +M   G  P+    S LI S   E  L L++K + +  +
Sbjct: 648 DALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  ++   ++  L   G  ++AY L   M+K E +                PN  +
Sbjct: 708 NSCTPNVVIYTDMIDGLCKVGKTEEAYRL---MLKMEEVG-------------CYPNVIT 751

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K GK++  L L+R+M   GC  N   Y  LI+  C++  L+E++ LL EM+
Sbjct: 752 YTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811

Query: 387 ESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ++ + P H    S +R +     ++ + ++ L+ ++      P      +LI    K G+
Sbjct: 812 QT-YWPRHI---SSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGR 867

Query: 445 AMEAFRFLTDMVQEGFLP--DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
              A   L ++     L   +   Y++ I  L    +VD A EL+  +      P++  +
Sbjct: 868 LEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTF 927

Query: 503 NIIISGLCKAQRVAEAEDL 521
             +I GL +  +  EA  L
Sbjct: 928 VHLIKGLTRVGKWQEALQL 946



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 37/199 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I   G +G +E+   L+  +  +G C PN  +Y  L+   C +  +D     L EM+  
Sbjct: 755 MIDGFGKIGKIEQCLELYRDMCSKG-CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQT 813

Query: 96  GW------------GYDKYTLTP---------------------LLQVYCNSGQFDKALS 122
            W            G+++  +T                      L+  +  +G+ + AL+
Sbjct: 814 YWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALN 873

Query: 123 VFNEIIDH---GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +  EI         ++++++ L+ + S   +VDKA EL   M + N+     TF  LI G
Sbjct: 874 LLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKG 933

Query: 180 FVKKSRVDKALQLFDKMTK 198
             +  +  +ALQL D + +
Sbjct: 934 LTRVGKWQEALQLSDSICQ 952


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 255/537 (47%), Gaps = 62/537 (11%)

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVA 144
           V    ++     + + +  L  LL   C +G+++++L     ++D G+  + +    L+ 
Sbjct: 53  VSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIK 112

Query: 145 ----FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
                   G+  +  E++ER    ++      +  LI GF+K ++++ A ++ D+M   G
Sbjct: 113 GFFNSRNIGKATRVMEILERYGKPDVF----AYNALISGFIKANQLENANRVLDRMKSRG 168

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
           F  D   Y+++IG  C   +L++AL+++ E+      P     + LI       E T+L 
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILI-------EATIL- 220

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
                                    +G ID A  LL  M+                KG +
Sbjct: 221 -------------------------DGGIDVAMKLLDEMLS---------------KG-L 239

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+T +++ II  + K+  +D A  L R ++  GC  ++  YN L+  L +  +  E  +
Sbjct: 240 EPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEK 299

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L+ EM   G KP   T + +   LCR   V  A+NL+R M+ +G +P       LI   C
Sbjct: 300 LISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFC 359

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+   A  FL  M+ +G LPDIV Y+  + GL    + D ALE+F  +   GC P+V 
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           +YN + S L  +     A ++  +++ +G+ P   TYN LI+  C+ G +D+A+  L  M
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479

Query: 561 LEKESGS--PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              +SG   P+V++Y  ++ GLC   R +DAI +   M EKGC PN  T++ LI G+
Sbjct: 480 ---QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 216/442 (48%), Gaps = 30/442 (6%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           ++ YG   D +    L+  +  + Q + A  V + +   G++ + V ++I++ +F   G+
Sbjct: 130 LERYGKP-DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A E+ E +   N      T+ +LI   +    +D A++L D+M   G   D   Y+ 
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWE-- 265
           II G+CK   ++ A +L   +   G  PD   + IL + + S     E   L+ E+    
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308

Query: 266 -DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              +V T ++L  ++ R    +G +++A NLL++M +               KG + P+ 
Sbjct: 309 CKPNVVTHSILIGTLCR----DGKVEEAVNLLRSMKE---------------KG-LKPDA 348

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             +D +I    ++G+LDLA      M   GC+ ++  YN ++ GLC + + +++ E+  +
Sbjct: 349 YCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHG 443
           ++E G  P   + N++F  L    D   AL ++ K+  QG +P  + +N+L I  LC+ G
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSL-ISCLCRDG 467

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EA   L DM    + P++V Y+  + GL  + R + A+E+   +   GC P+   Y 
Sbjct: 468 MVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYI 527

Query: 504 IIISGLCKAQRVAEAEDLFNEM 525
           ++I G+  +   AEA +L N +
Sbjct: 528 LLIEGIGFSGLRAEAMELANSL 549



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 36/344 (10%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +VF YN LI G   +N+LE +  +L  M+  GF P   T N M    C R  +  AL + 
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            ++     EP V   T+LI+     G    A + L +M+ +G  PD + Y+A I G+   
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             VD A EL R + + GC PD++ YNI++  L    + +E E L +EMI+ G  P+V T+
Sbjct: 257 MMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTH 316

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEK---------------------------------- 563
           ++LI   C+ G +++A+  L  M EK                                  
Sbjct: 317 SILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL-CKCDRPR 622
           +   PD++ Y T++ GLC  G+ D A+ ++ +++E GC PN  ++  L + L    DR R
Sbjct: 377 DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYR 436

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A  +  +++ + G+ PD   + +LIS    +     A E+L +M
Sbjct: 437 ALEMILKLLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 144/302 (47%), Gaps = 2/302 (0%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++  C + +  ES   L  M + G+ P       + +     +++  A  ++  +   G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                 +N L I    K  +   A R L  M   GFLPD+V Y+  IG      ++DLAL
Sbjct: 135 KPDVFAYNAL-ISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           E+F ++    C P V+ Y I+I        +  A  L +EM++KGL P   TYN +I G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK   +D+A   L R L      PD+ITY  L+  L   G+  +   L +EM   GC PN
Sbjct: 254 CKEMMVDKAFELL-RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T   LI  LC+  +   A+   R MKEKG+KPD + +  LI+ F  E    LA E L+
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 665 EM 666
            M
Sbjct: 373 YM 374



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 20/423 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A   LI        +E AN + D++K  G  +P+  +YN ++ + C    +DL     +E
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGF-LPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           +          T T L++     G  D A+ + +E++  G   D   ++ ++    K   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VDKA EL+  +     + +  T+ +L+   + + +  +  +L  +M   G   +   + +
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRD 268
           +IG LC++ ++E A+ L   MK  G+ PD      LI     EG L L  +  E      
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                +  N+IM  L   G  DQA  +       E + +VG            PN SS++
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVF------EKLDEVGC----------PPNVSSYN 422

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            + + L   G    AL +  ++   G   +   YN+LI  LC    ++E+ ELL +M+  
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
            ++P   + N +   LC+      A+ ++  M  +G +P      LLI+ +   G   EA
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542

Query: 449 FRF 451
              
Sbjct: 543 MEL 545


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 265/558 (47%), Gaps = 59/558 (10%)

Query: 115 GQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G  + A  V+ EI   G  ++ +  +I++ A  K G+++K    + ++ +  +  +  T+
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI  +  K  +++A +L + M   GF+     Y+ +I GLCK+ + E A ++++EM  
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSID 290
           SG++PD      L+     +G++ +  ++++ D   RDV    +  +S+M +   +G++D
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDV-VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A     ++ +   I                P+   + I+I    + G + +A++L  EM
Sbjct: 393 KALMYFNSVKEAGLI----------------PDNVIYTILIQGYCRKGMISVAMNLRNEM 436

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q GC  +V  YN ++ GLC    L E+ +L  EM E    P  +TL             
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL------------- 483

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                                 T+LI   CK G    A      M ++    D+V Y+  
Sbjct: 484 ----------------------TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + G   +  +D A E++ D+ +    P  ++Y+I+++ LC    +AEA  +++EMI+K +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V   N +I G+C+SGN       L +M+  E   PD I+Y TLI G         A 
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAF 640

Query: 591 MLWNEMEEK--GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  +MEE+  G  P+  T+ +++ G C+ ++ + A V  R M E+G+ PD   +  +I+
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700

Query: 649 AFLSELNPPLAFEVLKEM 666
            F+S+ N   AF +  EM
Sbjct: 701 GFVSQDNLTEAFRIHDEM 718



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 223/513 (43%), Gaps = 52/513 (10%)

Query: 156 ELIERMDDC--NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           E++  +D    N   N+  F +LI  +V+  ++ +A + F  +   GF       + +IG
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            L +   +E+A  +Y E+  SG+                                +N  T
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGV-------------------------------GINVYT 237

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           L  N ++  L  +G +++                VG  +  + +  V P+  +++ +I+ 
Sbjct: 238 L--NIMVNALCKDGKMEK----------------VGTFLSQVQEKGVYPDIVTYNTLISA 279

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               G ++ A  L   M   G    V+ YN +I+GLC   + E + E+  EM  SG  P 
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T  S+    C++ DVV    +   MR +   P +   + ++    + G   +A  +  
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            + + G +PD V Y+  I G      + +A+ L  ++   GC  DVV YN I+ GLCK +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + EA+ LFNEM  + L P   T  +LI+G CK GN+  AM    +M EK     DV+TY
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTY 518

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TL+DG    G  D A  +W +M  K   P  I++  L+  LC       A   +  M  
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K +KP + +  ++I  +    N       L++M
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 261/578 (45%), Gaps = 34/578 (5%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           D   S C  +      LIR       + EA+  F  ++ +G  V  + + N L+ +L + 
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID-ACNALIGSLVRI 213

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVF 138
             V+L     +E+   G G + YTL  ++   C  G+ +K  +  +++ + G + D   +
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+ A+S  G +++A EL+  M          T+  +I+G  K  + ++A ++F +M +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           SG + D+  Y  ++   CK   +    +++S+M+   + PD    S +++  +  G L  
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD- 392

Query: 259 LVKEIWEDRDVNTMTLLC-NSIMRILVS----NGSIDQAYNLLQAMIKGEPIADVGVEML 313
             K +     V    L+  N I  IL+      G I  A NL   M++     DV V   
Sbjct: 393 --KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV-VTYN 449

Query: 314 MIFKG--------------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            I  G                     + P++ +  I+I+   K G L  A+ LF++M + 
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
               +V  YN L+DG      ++ + E+  +M      PT  + + +   LC +  +  A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             +  +M  +  +P V     +IK  C+ G A +   FL  M+ EGF+PD + Y+  I G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629

Query: 474 LIDIKRVDLALELFRDICAH--GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            +  + +  A  L + +     G  PDV  YN I+ G C+  ++ EAE +  +MI +G+ 
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           P  +TY  +ING+    N+ +A      ML++   SPD
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR-GFSPD 726



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 194/398 (48%), Gaps = 8/398 (2%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS---PNTSSFDI 329
           +L  ++++ ILV +G +  A + L  MI+   ++   +E++     T S    N S FD+
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSR--LEIVNSLDSTFSNCGSNDSVFDL 170

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I T ++  KL  A   F  +   G   ++   N LI  L     +E ++ + +E+  SG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                +TLN M   LC+   +      + +++ +G  P +     LI      G   EAF
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +  M  +GF P +  Y+  I GL    + + A E+F ++   G  PD   Y  ++   
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SP 568
           CK   V E E +F++M ++ ++P +  ++ +++ + +SGN+D+A++  + +  KE+G  P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV--KEAGLIP 408

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D + YT LI G C  G    A+ L NEM ++GCA + +T+  ++ GLCK      A   F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             M E+ + PD +    LI       N   A E+ ++M
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506



 Score = 45.8 bits (107), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 34  GFLIRCLGS----VGLVEEANM--LFDQVKR----EGLCVPNNYSYNCLLEALCKSCSVD 83
           GF+  C+       G V E NM   F  VK+    +G  VP+ ++YN +L   C+   + 
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
             E+ L++M + G   D+ T T ++  + +     +A  + +E++  G+  +  F
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 171/649 (26%), Positives = 288/649 (44%), Gaps = 28/649 (4%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           R  +SP      +R L    + E    L+  + +EGL +P+  +YN ++ A CK  S+ +
Sbjct: 139 RLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGL-LPDTVTYNTMIMAYCKKGSLAI 197

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLV 143
                  +++ G   D YT   LL  YC +    KA  +   +   G   +E+ ++IL+ 
Sbjct: 198 AHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQ 257

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              +   V +A  L+  M      LN   + +LI G  K+ R+  A  L D+M   G   
Sbjct: 258 GLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVP 317

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS---DEGELTLL 259
               Y+ +I G CK+ +++ AL + + M+ +G  PD    + LI   C    DE E  LL
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE-ELL 376

Query: 260 VKEIWE--DRDVNTMTLLCNSIMR-------------ILVSNGSID-QAYN-LLQAMIKG 302
              I       V T T L N   +             ++ SN  +D QAY  L+  +IK 
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + +    +  +F   ++PN   +  II+   K G +  AL +F+ M   GC  N + Y
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
            +LI GL    +L ++  L+ +M+E G  P      ++ +  C++ +   A  L   M  
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEK 556

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P  +   +L   LCK G+A EA+ FL   V++G +   V Y++ + G       D 
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDF 613

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L   +   GC  D+  Y++++  LCK +++ EA  + ++M   G+  ++  Y ++I+
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS 673

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              K G  D A    + M+      P   TYT  I   C  G+ ++A  L  EME  G  
Sbjct: 674 EMIKEGKHDHAKSLFNEMIS-SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVT 732

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           P+ +T+   I G         A    + M +   +P+ + +  L+  FL
Sbjct: 733 PDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFL 781



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 277/660 (41%), Gaps = 72/660 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  AR +    VL   +V+  C ++      LI+ L   G + +A  L D++   G+ VP
Sbjct: 259 LYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGV-VP 317

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++YN +++  CKS  +         M+  G   D +T   L+   C  G+ D+A  + 
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELL 376

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N  I  G+    + F+ L+  + K   +D A  +   M   N +L+ + + VLI+  +KK
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+ +A +  ++M  +G A +  +Y  II G CK   +  AL+++  M+  G  P+    
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
             LI                                   L+ +  + +A  L+  M +  
Sbjct: 497 GSLIYG---------------------------------LIQDKKLHKAMALITKMQED- 522

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                           ++P   ++  +I    K  + D A  LF  M + G   +   YN
Sbjct: 523 ---------------GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L D LC S R EE+Y  L      G   T  T  S+     +  +   A  L+ KM  +
Sbjct: 568 VLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +  +   ++L++ LCK  K  EA   L  M   G   +IV Y+  I  +I   + D A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             LF ++ + G  P    Y + IS  CK  ++ EAE L  EM   G+ P V TY++ ING
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFING 744

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL----CIAGRPDDAIMLWNEME-- 597
               G +D+A   L RM++  S  P+  TY  L+        I     D   +WN +E  
Sbjct: 745 CGHMGYMDRAFSTLKRMVDA-SCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELN 803

Query: 598 ----------EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                     + G  P  +T+ ++I G CK  R   A V    M  K + P+  ++  LI
Sbjct: 804 TVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 221/523 (42%), Gaps = 47/523 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG+V  A  +F  ++ EG C PN ++Y  L+  L +   +      + +MQ+ G      
Sbjct: 471 VGMVGAALEVFKLMEHEG-CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
             T L+Q  C   +FD A  +F  +  +G   DE  +++L  A  K G  ++A   + R 
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK 589

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               + L + T+  L+ GF K    D A  L +KM   G  +D   Y V++  LCK K+L
Sbjct: 590 ---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 222 EMALQLYSEMKGSGITPDFE----ILSKLITSCSDEGELTLLVKEIWEDR--DVNTMTLL 275
             AL +  +M  SG+  +      I+S++I     +   +L  + I         T T+ 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF 706

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            +S  +I    G I++A +L+  M                 +  V+P+  ++ I IN   
Sbjct: 707 ISSYCKI----GQIEEAEHLIGEM----------------ERDGVTPDVVTYHIFINGCG 746

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLY--------------NNLID--GLCNSNRLEESY 379
             G +D A S  + M    C  N + Y               + ID  G+ N   L   +
Sbjct: 747 HMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVW 806

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL  M + G  PT  T +S+    C+   +  A  L+  M  +   P  +  T+LIK  
Sbjct: 807 QLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCC 866

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C      +   F+TDM++ GF P +  Y   I GL D    D A  LF D+       + 
Sbjct: 867 CDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNE 926

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           VA+ I+  GL KA  V     L   M  +       +Y++L +
Sbjct: 927 VAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 37/340 (10%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +++ + +LL+    +    L+  + Q G + +   YN +I   C    L  ++     + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           ESG +   +T N++    CR  D+  A  L+  M + G               C+  +  
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG---------------CRRNE-- 249

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
                               Y+  I GL + + V  AL L   +   GC  ++  Y ++I
Sbjct: 250 ------------------YSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLI 291

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GLCK  R+ +A  L +EM  +G++PSV TYN +I+G+CKSG +  A L +  ++E+   
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA-LGIKALMEQNGC 350

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           +PD  TY +LI GLC  G+ D+A  L N    +G  P  ITF  LI G CK +R   AL 
Sbjct: 351 NPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               M     K D+  +  LI+  + +     A E L EM
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEM 449



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/489 (22%), Positives = 198/489 (40%), Gaps = 40/489 (8%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANM--LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++PG + +     G     E  N   LF+ +++ GL  P+  +YN L +ALCKS      
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL-TPDEQAYNVLTDALCKS---GRA 579

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
           E     +   G    K T T L+  +  +G  D A  +  ++++ G   D + +S+LL A
Sbjct: 580 EEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K  ++++A  ++++M    ++ N   + ++I   +K+ + D A  LF++M  SG    
Sbjct: 640 LCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPS 699

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A  Y V I   CK  Q+E A  L  EM+  G+TPD       I  C   G +        
Sbjct: 700 ATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYM-------- 751

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                                    D+A++ L+ M+      +     L++         
Sbjct: 752 -------------------------DRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLI 786

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           ++  I  + +    +L+    L   M + G    V  Y+++I G C + RLEE+  LL  
Sbjct: 787 NAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH 846

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M      P       + +C C  +     ++ V  M   G +P ++    LI  LC  G 
Sbjct: 847 MLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGD 906

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A     D++   +  + V +     GL+    VD   +L   +    C  D  +Y++
Sbjct: 907 YDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSM 966

Query: 505 IISGLCKAQ 513
           +   + +A 
Sbjct: 967 LTDSIREAS 975


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 174/673 (25%), Positives = 304/673 (45%), Gaps = 31/673 (4%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L R  R      L ++ +   C  +    G LIR   S G ++ A  L +++K  G   
Sbjct: 31  MLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF-E 89

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
            N   +  L++ LC +  V       + M       D  T T L+   C +G+FD+A  +
Sbjct: 90  GNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGM 148

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E++  G   + V FS L+    K+G  ++A  ++E +    +  ++  F  +I     
Sbjct: 149 LREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCN 208

Query: 183 K-SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K + V+ A ++   +   GF     M++++I G CK K L+ A +L   M   G  P+  
Sbjct: 209 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268

Query: 242 ILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + LIT       +     LL K +      N +T   ++++  L   G +D AY L Q
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTY--STVINGLCKQGQVDDAYELFQ 326

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M +                    PN  + +I+I+ L K  +++ A  L+  M + GC  
Sbjct: 327 LMERR----------------NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH-FTLNSMFRCLCRRQDVVGALNL 416
           ++  YN+LIDGLC S +++E+++L + + ESG    +  T +++F        +  A  +
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              +  +G  P +   T LI E CK  +A+E    + +M  +GF P +   SA +GGL +
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK---GLIPS 533
               + A++LF  + A GC  D + YN+++ G+ +A +  +A  +  ++I K      PS
Sbjct: 491 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPS 550

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
            +  + L+   C+ G  D A   L +M E+   +  V +Y  L+ GL    R D+A  ++
Sbjct: 551 SSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAA-VSSYNRLLSGLSRLQRWDEATQVF 609

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             M   G AP   T   +I+ LC   +   A    + M + G  PD+     LI  +   
Sbjct: 610 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKS 669

Query: 654 LNPPLAFEVLKEM 666
               LA ++L+EM
Sbjct: 670 GRADLARKLLEEM 682



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 192/396 (48%), Gaps = 42/396 (10%)

Query: 311 EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           E++++F    +  V  N  S +  ++ L +  +   AL+LFR      CM N F Y  LI
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G  ++  L+ + +LL EM+ SGF+       ++ + LC    VV AL   R M  +   
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCA 123

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID---------- 476
           P V   T L+  LCK GK  EA   L +MV +G  PD V +S  I GL            
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 477 ----IKR----------------------VDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               I+R                      V+LA ++   + A G  P V+ +N++I+G C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           KA+ +  A  L   MI KG +P+V T+ +LI G CK+  + +A   L +M+     SP+V
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV-MGGCSPNV 302

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY+T+I+GLC  G+ DDA  L+  ME + C PN +T   LI GLCK  R   A   +  
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M+E G  PD+  + +LI           AF++ + +
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 159/618 (25%), Positives = 264/618 (42%), Gaps = 68/618 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L++ L   G V EA   F  + ++  C P+  +Y  L+ ALCK+   D  +  L+EM   
Sbjct: 98  LMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQ 155

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH------------------- 136
           G   D  T + L+   C  G  ++A  V  ++I  G  +                     
Sbjct: 156 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215

Query: 137 ------------------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                             +F++++  F K  ++D A +L+E M +     N  TF +LI 
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  K +RV +A QL +KM   G + +   Y  +I GLCK  Q++ A +L+  M+     P
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335

Query: 239 DFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           +    + LI          +  +L   ++E     D+ T     NS++  L  +  +D+A
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY----NSLIDGLCKSFQVDEA 391

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L Q + +                G  + N  ++  + +     G++  A  +F  +  
Sbjct: 392 FQLFQTIPE---------------SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVD 436

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++  Y +LI   C ++R  E  EL+ EM   GF P   TL+++   L        
Sbjct: 437 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 496

Query: 413 ALNLVRKMRVQG-HEPWVKHNTLL--IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           A+ L   M  +G  +  + +N ++  +    KH KA+     + D     F P      A
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDA 556

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  L  + + D A +L   +   G    V +YN ++SGL + QR  EA  +F  M++ G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P ++T N++I+  C +  +D A   + RM  K    PD+ T  TLI G C +GR D A
Sbjct: 617 PAPEISTVNVVISWLCSAAKVDDAYELVQRM-SKLGCCPDIETCNTLIGGYCKSGRADLA 675

Query: 590 IMLWNEMEEKGCAPNRIT 607
             L  EM E G  PN  T
Sbjct: 676 RKLLEEMTEAGLEPNDTT 693



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 246/543 (45%), Gaps = 42/543 (7%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLI-RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
            RVL +DV++     S  A   +I R       VE A+ +   V  +G   P    +N +
Sbjct: 181 FRVL-EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF-TPTVLMFNLV 238

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           +   CK+  +D     L+ M + G   + +T T L+   C + +  +A  +  +++  G 
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V +S ++    K G+VD A EL + M+  N   N  T  +LI G  K  R+++A Q
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQ 358

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-----------DF 240
           L+ +M ++G A D   Y+ +I GLCK+ Q++ A QL+  +  SG++             +
Sbjct: 359 LYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 418

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             L ++  +C      ++LV + +   D+ T T L   I+    ++ +++    + +   
Sbjct: 419 AALGRMADACRI---FSMLVDKGFSP-DLATYTSL---ILEYCKTSRAVEVVELVEEMAS 471

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           KG P                 P  ++   ++  L +    + A+ LF  M   GC  +  
Sbjct: 472 KGFP-----------------PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 514

Query: 361 LYNNLIDGLCNSNRLEESYELLREM---EESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +YN +++G+  +++ +++  +L ++    +  F P+   ++++   LC+      A  L+
Sbjct: 515 IYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLL 574

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM  +G    V     L+  L +  +  EA +    MV  G  P+I   +  I  L   
Sbjct: 575 HKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSA 634

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +VD A EL + +   GCCPD+   N +I G CK+ R   A  L  EM   GL P+  T+
Sbjct: 635 AKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 694

Query: 538 NLL 540
           +LL
Sbjct: 695 DLL 697



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 31/420 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L +A R+   + L + +V   C  SP  + +  +I  L   G V++A  LF  ++R   C
Sbjct: 277 LCKANRVGEAQQLLEKMVMGGC--SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN-C 333

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  ++N L++ LCK+  ++        M++ G   D  T   L+   C S Q D+A  
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 393

Query: 123 VFNEIIDHG--WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +F  I + G    +   +S L   ++  G +  AC +   + D     +  T+  LI  +
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 453

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD- 239
            K SR  + ++L ++M   GF         ++GGL +    E A+QL+  M   G T D 
Sbjct: 454 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 513

Query: 240 --FEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNL 295
             + ++ + +   S   +   +++++ + RD   N  +   ++++  L   G  D A  L
Sbjct: 514 LIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQL 573

Query: 296 LQAMIKGEPIADVGV---------------EMLMIFKGTVS----PNTSSFDIIINTLLK 336
           L  M +    A V                 E   +F+  VS    P  S+ +++I+ L  
Sbjct: 574 LHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCS 633

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             K+D A  L + M+++GC  ++   N LI G C S R + + +LL EM E+G +P   T
Sbjct: 634 AAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 693


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/338 (37%), Positives = 184/338 (54%), Gaps = 3/338 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+   + S +  ++  +I  L K  +L+ AL    +M   G   +V+ Y  +I  LC  N
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL E+ + L EM      P   T   +   LC+   V  A+ L+ KMR +     V +N+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNS 120

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I  LCK  +A EA+  L +MV  G +PDI  Y+  I G    K+ D AL +F  + A 
Sbjct: 121 L-ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSVATYNLLINGWCKSGNIDQ 552
           G  PDVV Y+ +I GLCK  R+ EA DLF  MI  G  +P+  TYN LI+G+C+ G +D+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           AM  L RM E  S SPDV+TYTTL++G C   R DDA  L N+M  KG  P+ +TF +L+
Sbjct: 240 AMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            GLC+ +R   A+     M+ K   P ++ +  ++  +
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 251/505 (49%), Gaps = 27/505 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
           D  T T L+Q  C   + ++AL    +++  G+  D + ++ ++ A      + +A + +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E M + N+  N  T+ VLI G  K  RVD+A+ L  KM K    + A  Y+ +I GLCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKA 128

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITS-C-SDEGELTLLVKEIWEDRDVNTMTLLC 276
           ++   A  L  EM  SG  PD    + LIT  C S + +  L V E    R      +  
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           + ++  L   G + +A +L   MIK                G+  PNT +++ +I+   +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKS---------------GSCMPNTVTYNSLISGFCR 233

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            GK+D A++L   M + G   +V  Y  L++G C   RL+++Y+LL +M   G  P   T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             S+   LCR   +  A++++ +MR +   P V     ++   C+  +  EA +F+ +  
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE-- 351

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +    P++V ++  I GL  + R   A+EL  +     C PDVV Y  +I GLC+ ++V 
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411

Query: 517 EAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           EA  ++ +M+ + G +P+  TY+ L+ G C +G +D+A     R   ++   P++ TY  
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA-----RGYIEKGCVPNIGTYNL 466

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKG 600
           LID    A R +DA  L ++M ++G
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQRG 491



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 219/466 (46%), Gaps = 54/466 (11%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
           ++D   Y  +I GLCK K+LE AL    +M   G  PD                      
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPD---------------------- 45

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                  V T T    +++  L     + +A   L+ M                    ++
Sbjct: 46  -------VYTYT----AVIHALCVENRLHEARKFLEEMANR----------------NLT 78

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++ ++I+ L K G++D A++L  +M +  C+     YN+LI GLC + R  E+Y+L
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDL 137

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM  SG  P  FT  ++    C+ +    AL +  ++  +G  P V   + LI  LCK
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 442 HGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            G+  EA      M++ G  +P+ V Y++ I G   + ++D A+ L   +   G  PDVV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +++G CK  R+ +A DL N+M  KGL P V T+  L++G C+   +  A+  L  M
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             ++S SP V TY T++DG C A + ++A      +EE  C PN ++F  +I GLCK +R
Sbjct: 318 -RRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A+      + +   PD+ ++  +I     E     A  V ++M
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/533 (27%), Positives = 232/533 (43%), Gaps = 96/533 (18%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  LI G  K  R+++AL    KM   GF  D   Y  +I  LC   +L  A +   EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
               +TP+                             V T T+L +     L   G +D+
Sbjct: 73  ANRNLTPN-----------------------------VVTYTVLIDG----LCKGGRVDE 99

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M K                    P   +++ +I+ L K  +   A  L  EM 
Sbjct: 100 AVALLSKMRK-----------------KCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC+ ++F Y  LI G C S + +++  +  ++   GF+P   T + +   LC+   + 
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 412 GALNLVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
            A++L  +M   G      V +N+L I   C+ GK  EA   L  M + G  PD+V Y+ 
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSL-ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + G   + R+D A +L   +   G  PDVV +  ++ GLC+  R+++A  +  EM  K 
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 530 LIPSVATYNLLINGWCKSGNIDQAM----------------------LC----------L 557
             P+V TYN +++G+C++  +++A                       LC          L
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNRITFMALITGLC 616
                +   +PDV+ YTT+IDGLC   + D+A  ++ +M EE GC PN IT+  L+TGLC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLC 441

Query: 617 KC---DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                DR R  +       EKG  P++  +  LI AF        A E+L +M
Sbjct: 442 NAGMLDRARGYI-------EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 240/512 (46%), Gaps = 32/512 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  +  +Y  L++ LCK   ++   + L +M   G+  D YT T ++   C   +  +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
               E+ +       V +++L+    K G VD+A  L+ +M    +     T+  LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGL 125

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  +A  L ++M  SG   D   Y  +I G CK+K+ + AL+++ ++   G  PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 241 EILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              S LI     EG L     L   + +       T+  NS++      G +D+A NLL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M      A+ G           SP+  ++  ++N   K  +LD A  L  +MT+ G   
Sbjct: 246 RM------AETGS----------SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  + +L+DGLC  NRL ++  +L EM      PT +T N++    CR       L   
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR----ANQLEEA 345

Query: 418 RKMRVQGHE--PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           RK  ++  +  P V    ++I+ LCK  ++ EA   + +  +    PD+V Y+  I GL 
Sbjct: 346 RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 476 DIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             K+VD A  ++R +    GC P+ + Y+ +++GLC A  +  A       I KG +P++
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGY----IEKGCVPNI 461

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            TYNLLI+ + K+   + A   L  M+++  G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 161/312 (51%), Gaps = 1/312 (0%)

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +   Y +LI GLC   RLE++   L +M   GF P  +T  ++   LC    +  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
             + +M  +   P V   T+LI  LCK G+  EA   L+ M ++  +P  V Y++ I GL
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              +R   A +L  ++   GC PD+  Y  +I+G CK+++  +A  +F +++ +G  P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY+ LI+G CK G + +A+    RM++  S  P+ +TY +LI G C  G+ D+A+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M E G +P+ +T+  L+ G CK  R   A      M  KG+ PD+  F +L+     E 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 655 NPPLAFEVLKEM 666
               A  +L EM
Sbjct: 306 RLSDAVHILGEM 317



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 192/473 (40%), Gaps = 97/473 (20%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + +  LI  L   G V+EA  L  +++++  CVP   +YN L+  LCK+      
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEA 134

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-------- 137
              L+EM   G   D +T T L+  +C S + D AL VF +++  G+  + V        
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194

Query: 138 -----------------------------FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
                                        ++ L+  F + G++D+A  L+ERM +     
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T+  L++GF K +R+D A  L ++MT+ G   D   +  ++ GLC+  +L  A+ + 
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM+    +P     + ++       +L    K + E+ D     +  N ++R L     
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
             +A  L++   +                   +P+   +  +I+ L ++ K+D A  ++R
Sbjct: 375 SSEAMELVEEARRRR----------------CNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 349 EM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +M  + GC+ N   Y+ L+ GLCN+                                   
Sbjct: 419 KMLEEPGCLPNSITYSTLVTGLCNA----------------------------------- 443

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               G L+  R    +G  P +    LLI    K  +  +A   L DMVQ GF
Sbjct: 444 ----GMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 168/642 (26%), Positives = 280/642 (43%), Gaps = 55/642 (8%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           ++  G  G V+EA  +F+++     C P+  SYN ++  L +S            M++ G
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYN-CEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVG 141

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
              D YT T  ++ +C + +   AL + N ++  G  ++   +  ++  F +     +A 
Sbjct: 142 IVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAY 201

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           EL   M    I  +  TF  L+H   KK  V ++ +L +K+ K G  S+   +++ I GL
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
           C+   L  A+ +   +   G+TPD    + LI        +    K + +  +  +    
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N+++      G +  A  +LQ  I                KG V P+  ++  +IN 
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAI---------------CKGFV-PDEFTYCSLING 365

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L ++ ++D AL+LF      G    V LYN LI GLC    + ++ +++ EM E+G    
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +T N +   LC+   V  A NL+     +G+ P V     LI   CK  K     + L 
Sbjct: 426 IWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILN 485

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M   G  PD++ Y++ + GL    + +  +E F  +   GC P+ + YNI+   LCKA 
Sbjct: 486 KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAG 545

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------- 560
           +V EA DL +E++ KG+ P   ++  +I+G+  +G++  A     RM             
Sbjct: 546 KVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605

Query: 561 --------------------LEKESG--SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
                               LE  +G  +PD  TY  +IDG CI G  D       EM E
Sbjct: 606 NIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           KG  P+  TF  +I  LC   R   A+     M   G+ P++
Sbjct: 666 KGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 283/592 (47%), Gaps = 33/592 (5%)

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI---IDHGWVDEHVFSIL 141
           +EM  K  ++ G+ +   T   ++Q     G F    +V  E    ID+  + E V+   
Sbjct: 24  LEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLL-EGVYIGA 82

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           + ++ + G+V +A ++ ERMD  N   +  ++  +++  V+     +A ++F +M   G 
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   + + I   C+ K+   AL+L + M   G   +      ++    +E    +   
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEE-NYRVEAY 201

Query: 262 EIWEDR-------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E++ D        DV+T     N ++  L   G + ++  LL  ++K             
Sbjct: 202 ELFNDMLRIGIFPDVSTF----NKLLHTLCKKGEVQESERLLNKVLK------------- 244

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             KG  S N  +F+I I  L + G L  A+S+   + + G   +V  YN LI GLC ++ 
Sbjct: 245 --KGMCS-NLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSN 301

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           + E+ + L ++   G +P  FT N++    C+   +  A  +++    +G  P       
Sbjct: 302 VVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCS 361

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LC++ +   A       + +G  P ++ Y+  I GL     +  AL++  ++  +G
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C  D+  YN++I+GLCK   V++A +L N+ I KG +P V T+N LI+G+CK   ++  +
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTI 481

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L++M      +PDVITY ++++GL  A + +D +  +  M EKGC PN+IT+  L   
Sbjct: 482 QILNKMWS-HGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTES 540

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LCK  +   AL     +  KG+ PD   F  +IS F +  +   A+++ + M
Sbjct: 541 LCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 164/623 (26%), Positives = 288/623 (46%), Gaps = 28/623 (4%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQV 110
           +F++VKRE     +  +Y C+++ L    +   +E  L E + D      +      ++ 
Sbjct: 26  MFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKS 85

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRL 168
           Y   G+  +A+ VF E +D    +  V S   ++    + G   +A ++  RM +  I  
Sbjct: 86  YGRKGKVQEAVDVF-ERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVP 144

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  TF + I  F +  R   AL+L + M   G   +A  Y  ++ G  +      A +L+
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILV 284
           ++M   GI PD    +KL+ +   +GE+     LL K + +    N  T   N  ++ L 
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTF--NIFIQGLC 262

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +  A ++L ++I                +  ++P+  +++ +I  L K+  +  A 
Sbjct: 263 RKGMLSGAMSMLDSVI----------------REGLTPDVVTYNTLICGLCKNSNVVEAE 306

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
               ++   G   + F YN LIDG C    L+ + ++L+     GF P  FT  S+   L
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+  ++  AL L      +G +P V    +LIK LC+ G  ++A + + +M + G   DI
Sbjct: 367 CQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDI 426

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  I GL  +  V  A  L  D  A G  PDV  +N +I G CK  ++     + N+
Sbjct: 427 WTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M + G+ P V TYN ++NG  K+   +  M     M+EK    P+ ITY  L + LC AG
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK-GCVPNKITYNILTESLCKAG 545

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-GMKPDMFVF 643
           + ++A+ L +E+  KG  P+ ++F  +I+G       + A   FR M E+  +      +
Sbjct: 546 KVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I+AF  +L+  +  ++  EM
Sbjct: 606 NIMINAFAEKLDLHMGEKLFLEM 628



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 234/519 (45%), Gaps = 32/519 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
                I+ L   G++  A  + D V REGL  P+  +YN L+  LCK+ +V   E  L +
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGL-TPDVVTYNTLICGLCKNSNVVEAEKYLHK 311

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           + + G   D +T   L+  YC  G    A  +    I  G+V DE  +  L+    +  E
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A  L        ++     + +LI G  ++  + +ALQ+ ++M+++G +SD   Y++
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK---EIWEDR 267
           +I GLCK   +  A  L ++    G  PD    + LI     + ++   ++   ++W   
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS-H 490

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            V    +  NS++             N L   +K E + +    M  + KG V PN  ++
Sbjct: 491 GVTPDVITYNSVL-------------NGLSKAVKNEDLMETFETM--VEKGCV-PNKITY 534

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+  +L K GK++ AL L  E+   G   +   +  +I G  N+  L+ +Y+L R M E
Sbjct: 535 NILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594

Query: 388 SGFKPTHFT--LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             +K +H T   N M      + D+     L  +M   G  P      ++I   C  G  
Sbjct: 595 Q-YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
              ++FL +M+++GF+P +  +   I  L    RV  A+++   +  +G  P+VV     
Sbjct: 654 DSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV----- 708

Query: 506 ISGLCKA-QRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            + + +A ++V  A  +  E + K    +   Y LL +G
Sbjct: 709 -NSISEADKKVVAAPKIVVEDLLKRSCITYYAYELLYDG 746


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/338 (37%), Positives = 184/338 (54%), Gaps = 3/338 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+   + S +  ++  +I  L K  +L+ AL    +M   G   +V+ Y  +I  LC  N
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL E+ + L EM      P   T   +   LC+   V  A+ L+ KMR +     V +N+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNS 120

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I  LCK  +A EA+  L +MV  G +PDI  Y+  I G    K+ D AL +F  + A 
Sbjct: 121 L-ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSVATYNLLINGWCKSGNIDQ 552
           G  PDVV Y+ +I GLCK  R+ EA DLF  MI  G  +P+  TYN LI+G+C+ G +D+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           AM  L RM E  S SPDV+TYTTL++G C   R DDA  L N+M  KG  P+ +TF +L+
Sbjct: 240 AMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            GLC+ +R   A+     M+ K   P ++ +  ++  +
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 251/505 (49%), Gaps = 27/505 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
           D  T T L+Q  C   + ++AL    +++  G+  D + ++ ++ A      + +A + +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E M + N+  N  T+ VLI G  K  RVD+A+ L  KM K    + A  Y+ +I GLCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKA 128

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITS-C-SDEGELTLLVKEIWEDRDVNTMTLLC 276
           ++   A  L  EM  SG  PD    + LIT  C S + +  L V E    R      +  
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           + ++  L   G + +A +L   MIK                G+  PNT +++ +I+   +
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKS---------------GSCMPNTVTYNSLISGFCR 233

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            GK+D A++L   M + G   +V  Y  L++G C   RL+++Y+LL +M   G  P   T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             S+   LCR   +  A++++ +MR +   P V     ++   C+  +  EA +F+ +  
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE-- 351

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +    P++V ++  I GL  + R   A+EL  +     C PDVV Y  +I GLC+ ++V 
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411

Query: 517 EAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           EA  ++ +M+ + G +P+  TY+ LI G C +G +D+A     R   ++   P++ TY  
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA-----RGYIEKGCVPNIGTYNL 466

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKG 600
           LID    A R +DA  L ++M ++G
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQRG 491



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 219/466 (46%), Gaps = 54/466 (11%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
           ++D   Y  +I GLCK K+LE AL    +M   G  PD                      
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPD---------------------- 45

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                  V T T    +++  L     + +A   L+ M                    ++
Sbjct: 46  -------VYTYT----AVIHALCVENRLHEARKFLEEMANR----------------NLT 78

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++ ++I+ L K G++D A++L  +M +  C+     YN+LI GLC + R  E+Y+L
Sbjct: 79  PNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERASEAYDL 137

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM  SG  P  FT  ++    C+ +    AL +  ++  +G  P V   + LI  LCK
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197

Query: 442 HGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            G+  EA      M++ G  +P+ V Y++ I G   + ++D A+ L   +   G  PDVV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +++G CK  R+ +A DL N+M  KGL P V T+  L++G C+   +  A+  L  M
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             ++S SP V TY T++DG C A + ++A      +EE  C PN ++F  +I GLCK +R
Sbjct: 318 -RRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A+      + +   PD+ ++  +I     E     A  V ++M
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 232/533 (43%), Gaps = 96/533 (18%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  LI G  K  R+++AL    KM   GF  D   Y  +I  LC   +L  A +   EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
               +TP+                             V T T+L +     L   G +D+
Sbjct: 73  ANRNLTPN-----------------------------VVTYTVLIDG----LCKGGRVDE 99

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M K                    P   +++ +I+ L K  +   A  L  EM 
Sbjct: 100 AVALLSKMRK-----------------KCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC+ ++F Y  LI G C S + +++  +  ++   GF+P   T + +   LC+   + 
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 412 GALNLVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
            A++L  +M   G      V +N+L I   C+ GK  EA   L  M + G  PD+V Y+ 
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSL-ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + G   + R+D A +L   +   G  PDVV +  ++ GLC+  R+++A  +  EM  K 
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 530 LIPSVATYNLLINGWCKSGNIDQAM----------------------LC----------L 557
             P+V TYN +++G+C++  +++A                       LC          L
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNRITFMALITGLC 616
                +   +PDV+ YTT+IDGLC   + D+A  ++ +M EE GC PN IT+  LITGLC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLC 441

Query: 617 KC---DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                DR R  +       EKG  P++  +  LI AF        A E+L +M
Sbjct: 442 NAGMLDRARGYI-------EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 240/512 (46%), Gaps = 32/512 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  +  +Y  L++ LCK   ++   + L +M   G+  D YT T ++   C   +  +A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
               E+ +       V +++L+    K G VD+A  L+ +M    +     T+  LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGL 125

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  +A  L ++M  SG   D   Y  +I G CK+K+ + AL+++ ++   G  PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 241 EILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              S LI     EG L     L   + +       T+  NS++      G +D+A NLL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M      A+ G           SP+  ++  ++N   K  +LD A  L  +MT+ G   
Sbjct: 246 RM------AETGS----------SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  + +L+DGLC  NRL ++  +L EM      PT +T N++    CR       L   
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR----ANQLEEA 345

Query: 418 RKMRVQGHE--PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           RK  ++  +  P V    ++I+ LCK  ++ EA   + +  +    PD+V Y+  I GL 
Sbjct: 346 RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 476 DIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             K+VD A  ++R +    GC P+ + Y+ +I+GLC A  +  A       I KG +P++
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGY----IEKGCVPNI 461

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            TYNLLI+ + K+   + A   L  M+++  G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 161/312 (51%), Gaps = 1/312 (0%)

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +   Y +LI GLC   RLE++   L +M   GF P  +T  ++   LC    +  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
             + +M  +   P V   T+LI  LCK G+  EA   L+ M ++  +P  V Y++ I GL
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              +R   A +L  ++   GC PD+  Y  +I+G CK+++  +A  +F +++ +G  P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY+ LI+G CK G + +A+    RM++  S  P+ +TY +LI G C  G+ D+A+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M E G +P+ +T+  L+ G CK  R   A      M  KG+ PD+  F +L+     E 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 655 NPPLAFEVLKEM 666
               A  +L EM
Sbjct: 306 RLSDAVHILGEM 317



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 192/473 (40%), Gaps = 97/473 (20%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + +  LI  L   G V+EA  L  +++++  CVP   +YN L+  LCK+      
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEA 134

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-------- 137
              L+EM   G   D +T T L+  +C S + D AL VF +++  G+  + V        
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194

Query: 138 -----------------------------FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
                                        ++ L+  F + G++D+A  L+ERM +     
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T+  L++GF K +R+D A  L ++MT+ G   D   +  ++ GLC+  +L  A+ + 
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM+    +P     + ++       +L    K + E+ D     +  N ++R L     
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
             +A  L++   +                   +P+   +  +I+ L ++ K+D A  ++R
Sbjct: 375 SSEAMELVEEARRRR----------------CNPDVVMYTTVIDGLCREKKVDEACRVYR 418

Query: 349 EM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +M  + GC+ N   Y+ LI GLCN+                                   
Sbjct: 419 KMLEEPGCLPNSITYSTLITGLCNA----------------------------------- 443

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               G L+  R    +G  P +    LLI    K  +  +A   L DMVQ GF
Sbjct: 444 ----GMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 269/583 (46%), Gaps = 38/583 (6%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G+ ++ +T   LL       + DKA +VF E+ID     D   F+ILL    +  +++KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+ RM +     ++  +  LI G+ K     +A +   +M K+        Y  I+ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
           LCK ++   A++L  EM+  G +P+    + ++    +E +L    K++ E+  V     
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDE-AKKMLEEMAVRGYFP 180

Query: 273 -TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  NS ++ L     +D+A   L  M                    V+P+  S+  +I
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM-------------------PVTPDVVSYTTVI 221

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N L K G LD A  +   M+  GC  +V  Y++LIDG C    +E +  LL  M + G +
Sbjct: 222 NGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 281

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P     NS+   L R   +  A +++ +M  +G  P V      I  LCK  +  +A   
Sbjct: 282 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAV 341

Query: 452 LTDMVQEGFLP----------DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC-PDVV 500
              MV+ G  P          DI+ Y+  + GL    R D A  LF  +     C PDV 
Sbjct: 342 FDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 401

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN+++   CK +++ +A  +  +M+ K    +V T+N+L++G C    +  A   L  M
Sbjct: 402 FYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM 460

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           ++ E   PD +TY TL+D +C  G+   A+ L+ E  + GC P+ +T+ ALITGL   + 
Sbjct: 461 VD-EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENM 519

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
              A + F  + E+   PD    + L+   L  LN P   EV+
Sbjct: 520 AEEAYLLFTKLVERRWVPDDKT-LGLLHRKLKLLNKPRKAEVV 561



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 249/506 (49%), Gaps = 32/506 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  L+    ++ R DKA  +F +M       DA  + +++ GLC++ QLE A +L   M
Sbjct: 9   TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           K  G  PD  I + LI+  S   +     K + E        ++ N  +  +V+      
Sbjct: 69  KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAE--------MVKNHCLPTVVT------ 114

Query: 292 AYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
             N++  + K E   D  V++L  M  KG  SPN  ++++I+  L ++ KLD A  +  E
Sbjct: 115 YTNIVDGLCKAERTRD-AVKLLDEMRDKG-CSPNIYTYNVIVEGLCEERKLDEAKKMLEE 172

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +V  YN+ I GLC  +R++E+ + L  M  +   P   +  ++   LC+  D
Sbjct: 173 MAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGD 229

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  ++  M  +G  P V   + LI   CK G+   A   L  M++ G  P++V Y++
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +G L  +  +  A ++  ++   G  PDVV+YN  I GLCKA+RV +A+ +F+ M+ +G
Sbjct: 290 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349

Query: 530 LIPSVATYNLLI----------NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             P+ ++Y++LI          +G CK G  D+A    S++L+++   PDV  Y  ++D 
Sbjct: 350 CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C   + D A+ +  +M EK C  N +T+  L+ GLC  DR   A      M ++G  PD
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 468

Query: 640 MFVFVALISAFLSELNPPLAFEVLKE 665
              +  L+ A         A E+ +E
Sbjct: 469 FVTYGTLVDAMCKCGKSAAALELFEE 494



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 4/298 (1%)

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
           +G   NVF YN L+  L   +R +++  + +EM +   +P  FT   + R LCR   +  
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L+ +M+  G  P       LI    K     +AF+FL +MV+   LP +V Y+  + 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL   +R   A++L  ++   GC P++  YN+I+ GLC+ +++ EA+ +  EM  +G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V TYN  I G CK   +D+A   L+RM      +PDV++YTT+I+GLC +G  D A  +
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM----PVTPDVVSYTTVINGLCKSGDLDSASRM 236

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + M  +GC P+ +T+ +LI G CK      A+     M + G +P+M  + +L+ A 
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 174/356 (48%), Gaps = 15/356 (4%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+ + ++ +I+   K      A     EM +  C+  V  Y N++DGLC + R  ++ +L
Sbjct: 75  PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKL 134

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM + G  P  +T N +   LC  + +  A  ++ +M V+G+ P V      IK LCK
Sbjct: 135 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 194

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             +  EA +FL  M      PD+V Y+  I GL     +D A  +   +   GC PDVV 
Sbjct: 195 CDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVT 251

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y+ +I G CK   V  A  L + M+  G  P++  YN L+    + G+I +A   L  M 
Sbjct: 252 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM- 310

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT-------- 613
           E+   +PDV++Y   IDGLC A R   A  +++ M E+GC PN  ++  LI         
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVL 370

Query: 614 --GLCKCDRPRAALVHF-RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             GLCK  R   A   F +++ EK  +PD+F +  ++ +         A ++ K+M
Sbjct: 371 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 247/574 (43%), Gaps = 70/574 (12%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N ++YN LL  L +    D      +EM D     D +T   LL+  C S Q +KA  + 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + + G V D+ +++ L+  +SK  +  +A + +  M   +      T+  ++ G  K 
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
            R   A++L D+M   G + +   Y+VI+ GLC+ ++L+ A ++  EM   G  PD   +
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
               K +  C    E    +  +    DV + T + N     L  +G +D A  +L  M 
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVING----LCKSGDLDSASRMLDHM- 240

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                ++ G           +P+  ++  +I+   K G+++ A+ L   M ++GC  N+ 
Sbjct: 241 -----SNRGC----------TPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN+L+  L     + ++ ++L EME  GF P   + N+    LC+ + V  A  +  +M
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 345

Query: 421 RVQGHEPWVKHNTLLIKE----------LCKHGKAMEAFRFLTDMVQEGFL-PDIVCYSA 469
             +G  P     ++LI +          LCK G+  EA    + ++ E    PD+  Y+ 
Sbjct: 346 VERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 405

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCC--------------------------------- 496
            +      +++D AL++ + +    CC                                 
Sbjct: 406 MLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 465

Query: 497 -PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD V Y  ++  +CK  + A A +LF E +  G +P V TY+ LI G       ++A L
Sbjct: 466 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYL 525

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             ++++E+    PD  T   L   L +  +P  A
Sbjct: 526 LFTKLVERR-WVPDDKTLGLLHRKLKLLNKPRKA 558



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 246/553 (44%), Gaps = 41/553 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L+R  R      + Q+++   C         L+R L     +E+A  L  ++K  G CVP
Sbjct: 17  LTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG-CVP 75

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           ++  YN L+    K+         L EM          T T ++   C + +   A+ + 
Sbjct: 76  DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLL 135

Query: 125 NEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+ D G     + +++++    +  ++D+A +++E M       +  T+   I G  K 
Sbjct: 136 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 195

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD+A +   +M       D   Y  +I GLCK+  L+ A ++   M   G TPD    
Sbjct: 196 DRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-----LVSNGSIDQAYNLLQA 298
           S LI      GE+               M LL +S++++     +V+  S+  A + L  
Sbjct: 253 SSLIDGFCKGGEVE------------RAMGLL-DSMLKLGCRPNMVAYNSLLGALHRLGH 299

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           + K E   D+ VEM    +   +P+  S++  I+ L K  ++  A ++F  M + GC  N
Sbjct: 300 IGKAE---DMLVEME---RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPN 353

Query: 359 ----------VFLYNNLIDGLCNSNRLEESYELLRE-MEESGFKPTHFTLNSMFRCLCRR 407
                     + LY  L+DGLC   R +E+  L  + ++E   +P  F  N M    C+R
Sbjct: 354 ASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 413

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           + +  AL + ++M  +     V  N +L+  LC   +  +A   L  MV EGF+PD V Y
Sbjct: 414 RQIDKALQIHKQMLEKNCCNVVTWN-ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 472

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
              +  +    +   ALELF +    GC PDVV Y+ +I+GL       EA  LF +++ 
Sbjct: 473 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVE 532

Query: 528 KGLIPSVATYNLL 540
           +  +P   T  LL
Sbjct: 533 RRWVPDDKTLGLL 545



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 3/170 (1%)

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +V  YN ++  L +  R  +A  +F EMI K   P   T+ +L+ G C+S  +++A   L
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 558 SRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            RM  KE G  PD   Y  LI G   A     A     EM +  C P  +T+  ++ GLC
Sbjct: 66  GRM--KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K +R R A+     M++KG  P+++ +  ++     E     A ++L+EM
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 221/463 (47%), Gaps = 16/463 (3%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+  F +  R  +A  L      + F  D   ++V+I G C  ++ E A  +  EM+  
Sbjct: 64  ALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED 123

Query: 235 -GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            G+ P  +  + ++      G++ L   + +E    N  T+              I    
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKV-LAAMDHFETTTTNGCTI-------------DIHTYT 169

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            ++  + K + I D    M  I     +P  ++++ ++N L K G+L+ A+ L R++   
Sbjct: 170 AIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 229

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC  +V  Y +LIDGL    R  E+Y+L +EM   G         ++ R L +   +  A
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            ++ + M  QG  P V   + +I  LCK G+   A R    M   G  P+ V YSA I G
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L   +++D ALE+   +    C PD + YNI+I GLCK+  V  A   F+EM+  G  P 
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TYN+L++G+CK+GN D A      M      SP+V+TY TLI GLC   +   A + +
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHC-SPNVVTYGTLISGLCKRRQLTKASLYF 468

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
             M+E+GC P+   + +L+ GLCK  +     + F  M+  G+
Sbjct: 469 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 230/470 (48%), Gaps = 22/470 (4%)

Query: 186 VDKALQLFDKMT--KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            D A +LF  ++  + GF       + ++    + K+   A  L      +   PD E  
Sbjct: 38  ADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETW 97

Query: 244 SKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LIT      +  E   +++E+ ED  V       N ++  L  +G +      L AM 
Sbjct: 98  NVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKV------LAAMD 151

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E     G  +          +  ++  I++ L K+ K+  A++L  ++T  GC   + 
Sbjct: 152 HFETTTTNGCTI----------DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN L++GLC   RLEE+ +LLR++ ++G  P   T  S+   L + +    A  L ++M
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            ++G        T LI+ L + GK  +A      M  +G +PD+V  S  I GL    R+
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A+ +F+ + A G  P+ V Y+ +I GLCKA+++  A ++  +M      P   TYN+L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G CKSG+++ A      MLE     PDV TY  L+ G C AG  D A  ++++M    
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEA-GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           C+PN +T+  LI+GLCK  +   A ++F+ MKE+G  PD FV+ +L+   
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCNSNRLEE 377
           T  P+  +++++I       + + A ++ REM +  G   ++  +N ++ GLC S ++  
Sbjct: 89  TFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLA 148

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +       +G      T  ++   L + + +  A+ L+ K+   G  P +     L+ 
Sbjct: 149 AMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLN 208

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK G+  EA   L  +V  G  PD+V Y++ I GL   KR   A +LF+++   G   
Sbjct: 209 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVL 268

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D V Y  +I GL +A ++ +A  ++  M ++G +P V T + +I+G CK+G I  A+   
Sbjct: 269 DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIF 328

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M E    +P+ + Y+ LI GLC A + D A+ +  +M++  C P+ IT+  LI GLCK
Sbjct: 329 KSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 387

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                AA   F  M E G KPD++ +  L+S F    N   A  V  +M
Sbjct: 388 SGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 169/370 (45%), Gaps = 41/370 (11%)

Query: 335 LKDGKLDLALSLFREMT--QIGCMQNVFLYNNLID------------------------- 367
           LKD   DLA  LF+ ++  + G   +V   N L+D                         
Sbjct: 35  LKDA--DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLP 92

Query: 368 ----------GLCNSNRLEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNL 416
                     G C +   EE++ ++REMEE  G  P+  T N +   LC+   V+ A++ 
Sbjct: 93  DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
                  G    +   T ++  L K+ K  +A   +  +   G  P I  Y+A + GL  
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           + R++ A++L R I  +GC PDVV Y  +I GL K +R  EA  LF EM  +GL+     
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  LI G  ++G I QA   + + +  +   PDV+T +T+IDGLC AGR   A+ ++  M
Sbjct: 273 YTALIRGLLQAGKIPQAS-SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           E +G APN + + ALI GLCK  +   AL     MK+    PD   +  LI       + 
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 657 PLAFEVLKEM 666
             A     EM
Sbjct: 392 EAARAFFDEM 401



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 224/486 (46%), Gaps = 25/486 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDE-HVFSILLVAFSKWGEVDKACEL 157
           D  T   L+  YC + + ++A +V  E+  D+G        +++L    K G+V  A + 
Sbjct: 93  DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            E        ++  T+  ++    K  ++  A+ L +K+T +G     A Y+ ++ GLCK
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTL 274
             +LE A+ L  ++  +G TPD    + LI     E    E   L KE+   R +   T+
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL-RGLVLDTV 271

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              +++R L+  G I QA ++ + M                 +G V P+  +   +I+ L
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTS---------------QGCV-PDVVTLSTMIDGL 315

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++  A+ +F+ M   G   N  +Y+ LI GLC + +++ + E+L +M+++   P  
Sbjct: 316 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +   LC+  DV  A     +M   G +P V    +L+   CK G    A     D
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M      P++V Y   I GL   +++  A   F+ +   GC PD   Y+ ++ GLCK+ +
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +     LF+EM   G+  S  T   LI   CK+  +D+A + L   + KE G P    Y 
Sbjct: 496 LEGGCMLFDEMERSGVANS-QTRTRLIFHLCKANRVDEA-VSLFNAIRKE-GMPHPYAYN 552

Query: 575 TLIDGL 580
           ++I  L
Sbjct: 553 SIISTL 558



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 213/471 (45%), Gaps = 19/471 (4%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  +  +++ +    P+  ++N +L  LCKS  V       +     G   D +T T 
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++     + +   A+++  +I  +G       ++ LL    K G +++A +L+ ++ D  
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              +  T+  LI G  K+ R  +A +LF +M   G   D   Y  +I GL +  ++  A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +Y  M   G  PD   LS +I      G +   V+ I++  +            R L  
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR-IFKSMEA-----------RGLAP 338

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           N  +  A  L+  + K   + D  +EML  + K   +P+T +++I+I+ L K G ++ A 
Sbjct: 339 NEVVYSA--LIHGLCKARKM-DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 395

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           + F EM + GC  +V+ YN L+ G C +   + +  +  +M  S   P   T  ++   L
Sbjct: 396 AFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGL 455

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+R+ +  A    + M+ +G  P     + L+  LCK GK +E    L D ++   + + 
Sbjct: 456 CKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK-LEGGCMLFDEMERSGVANS 514

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
              +  I  L    RVD A+ LF  I   G  P   AYN IIS L K+ +V
Sbjct: 515 QTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKV 564



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 185/437 (42%), Gaps = 53/437 (12%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +++A  L +++   G C P   +YN LL  LCK   ++     L+++ D G   D  T T
Sbjct: 181 IQDAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 239

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+       +  +A  +F E+   G V D   ++ L+    + G++ +A  + + M   
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ 299

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +  T   +I G  K  R+  A+++F  M   G A +  +Y  +I GLCK ++++ A
Sbjct: 300 GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 359

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L++ ++MK +  TPD                                 T+  N ++  L 
Sbjct: 360 LEMLAQMKKAFCTPD---------------------------------TITYNILIDGLC 386

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            +G ++ A      M+                +    P+  +++I+++   K G  D A 
Sbjct: 387 KSGDVEAARAFFDEML----------------EAGCKPDVYTYNILVSGFCKAGNTDAAC 430

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F +M+   C  NV  Y  LI GLC   +L ++    + M+E G  P  F  +S+   L
Sbjct: 431 GVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   + G   L  +M   G     +  T LI  LCK  +  EA      + +EG +P  
Sbjct: 491 CKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHP 548

Query: 465 VCYSAAIGGLIDIKRVD 481
             Y++ I  LI   +V+
Sbjct: 549 YAYNSIISTLIKSAKVN 565



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 2/233 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A +I     + + +    C      L  +I  L   G +  A  +F  ++  GL  P
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL-AP 338

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N   Y+ L+  LCK+  +D     L +M+      D  T   L+   C SG  + A + F
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+++ G   D + ++IL+  F K G  D AC + + M   +   N  T+  LI G  K+
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
            ++ KA   F  M + G   D+ +Y  ++ GLCK+ +LE    L+ EM+ SG+
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 2/133 (1%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           D+  S C  +    G LI  L     + +A++ F  +K  G C P+++ Y+ L++ LCKS
Sbjct: 435 DMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG-CPPDSFVYSSLVDGLCKS 493

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS 139
             ++   M   EM+  G   +  T T L+   C + + D+A+S+FN I   G    + ++
Sbjct: 494 GKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYN 552

Query: 140 ILLVAFSKWGEVD 152
            ++    K  +V+
Sbjct: 553 SIISTLIKSAKVN 565


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 241/519 (46%), Gaps = 55/519 (10%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           GE+++  + +E M  C   + +   C  LI G  K  +  KA ++ + +  SG   D   
Sbjct: 124 GELEEGFKFLEDMV-CRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V+I G CK  ++  ALQL   M    ++PD                            
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRMS---VSPD---------------------------- 211

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 +  N+I+R L  +G + +A  +L   ++ E                  P+  ++
Sbjct: 212 -----VVTYNTILRTLCDSGKLKEAMEVLDRQMQRE----------------CYPDVITY 250

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+I    K+  +  A+ L  EM   GC  +V  YN LI+G+C   RL+E+   L  M  
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G +P   T N + R +C     + A   + +M  +G  P V    +LI  LC+ G    
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L  M Q G  P+ + Y+  +  L   K+++ A+E    + + GC PD+V YN +++
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LCK  +V  A ++ N++ +KG  P + TYN +I+G  K G  D A+  L  M  K    
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGK-GLK 489

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+ITY+TL+ GL   G+ D+AI  ++++EE G  PN IT+ +++ GLCK  +   A+  
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M  +G KP    ++ LI     E     A E+L E+
Sbjct: 550 LAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 224/436 (51%), Gaps = 24/436 (5%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L +N +LE   +   +M   G  PD    + LI      G       + W+         
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTG-------KTWK--------- 163

Query: 275 LCNSIMRILVSNGSIDQ--AYNLLQAMIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIII 331
               +M IL  +G++     YN+L   I G     ++G  + ++ + +VSP+  +++ I+
Sbjct: 164 -ATRVMEILEDSGAVPDVITYNVL---ISGYCKTGEIGSALQLLDRMSVSPDVVTYNTIL 219

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            TL   GKL  A+ +     Q  C  +V  Y  LI+  C  + + ++ +LL EM + G K
Sbjct: 220 RTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCK 279

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N +   +C+   +  A+  +  M   G +P V  + ++++ +C  G+ M+A +F
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKF 339

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M+++G  P +V ++  I  L     +  A+++   +  HGC P+ ++YN ++  LCK
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            +++  A +  + M+++G  P + TYN L+   CK G +D A+  L+++  K   SP +I
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK-GCSPVLI 458

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY T+IDGL   G+ DDAI L +EM+ KG  P+ IT+  L+ GL +  +   A+  F  +
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518

Query: 632 KEKGMKPDMFVFVALI 647
           +E G+KP+   + +++
Sbjct: 519 EEMGVKPNAITYNSIM 534



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 223/474 (47%), Gaps = 26/474 (5%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T L++  C +G+  KA  V   + D G V D   +++L+  + K GE+  A +L++RM  
Sbjct: 149 TSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM-- 206

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            ++  +  T+  ++       ++ +A+++ D+  +     D   Y ++I   CK   +  
Sbjct: 207 -SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQ 265

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           A++L  EM+  G  PD    + LI     EG L   ++ +            +  N I+R
Sbjct: 266 AMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            + S G    A   L  MI+               KG  SP+  +F+I+IN L + G + 
Sbjct: 326 SMCSTGRWMDAEKFLAEMIR---------------KG-CSPSVVTFNILINFLCRKGLIG 369

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +  +M Q GC  N   YN L+  LC   ++E + E L  M   G  P   T N++ 
Sbjct: 370 RAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL 429

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   V  A+ ++ ++  +G  P +     +I  L K GK  +A + L +M  +G  
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDI+ YS  +GGL    +VD A+  F D+   G  P+ + YN I+ GLCKA++   A D 
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL----SRMLEKESGSPDVI 571
              M+ +G  P+  +Y +LI G    G   +A+  L    SR + K+S +  V+
Sbjct: 550 LAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVV 603



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 172/333 (51%), Gaps = 4/333 (1%)

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L+++G+L+       +M   G + ++    +LI GLC + +  ++  ++  +E+SG  P 
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +    C+  ++  AL L+ +M V      V +NT+L + LC  GK  EA   L 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVS--PDVVTYNTIL-RTLCDSGKLKEAMEVLD 236

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
             +Q    PD++ Y+  I        V  A++L  ++   GC PDVV YN++I+G+CK  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+ EA    N M + G  P+V T+N+++   C +G    A   L+ M+ K   SP V+T+
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSVVTF 355

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             LI+ LC  G    AI +  +M + GC PN +++  L+  LCK  +   A+ +  +M  
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G  PD+  +  L++A   +    +A E+L ++
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 448



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 226/483 (46%), Gaps = 24/483 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  +   L+  LCK+         ++ ++D G   D  T   L+  YC +G+   AL 
Sbjct: 142 IPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSAL- 200

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
              +++D   V   V  ++ +L      G++ +A E+++R        +  T+ +LI   
Sbjct: 201 ---QLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 257

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K+S V +A++L D+M   G   D   Y+V+I G+CK  +L+ A++  + M   G  P+ 
Sbjct: 258 CKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV 317

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
              + ++ S    G      K + E   +  +   +  N ++  L   G I +A ++L+ 
Sbjct: 318 ITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEK 377

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M +                   +PN+ S++ +++ L KD K++ A+     M   GC  +
Sbjct: 378 MPQH----------------GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPD 421

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +  YN L+  LC   +++ + E+L ++   G  P   T N++   L +      A+ L+ 
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M+ +G +P +   + L+  L + GK  EA  F  D+ + G  P+ + Y++ + GL   +
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +   A++    + A GC P   +Y I+I GL       EA +L NE+ ++G++   +   
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQ 601

Query: 539 LLI 541
           +++
Sbjct: 602 VVV 604



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 4/269 (1%)

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N+  R L R  ++      +  M  +G  P +   T LI+ LCK GK  +A R +  +  
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +PD++ Y+  I G      +  AL+L   +      PDVV YN I+  LC + ++ E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKE 230

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A ++ +  + +   P V TY +LI   CK   + QAM  L  M +K    PDV+TY  LI
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPDVVTYNVLI 289

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +G+C  GR D+AI   N M   GC PN IT   ++  +C   R   A      M  KG  
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P +  F  LI+    +     A +VL++M
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKM 378



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 180/375 (48%), Gaps = 24/375 (6%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFD-QVKREGLCVPNNYSYNCLLEALCKSCS 81
           R  +SP  + +  ++R L   G ++EA  + D Q++RE  C P+  +Y  L+EA CK   
Sbjct: 205 RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCKESG 262

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
           V      L EM+D G   D  T   L+   C  G+ D+A+   N +  +G     +  +I
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           +L +    G    A + +  M       +  TF +LI+   +K  + +A+ + +KM + G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              ++  Y+ ++  LCK+K++E A++    M   G  PD    + L+T+   +G++ + V
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 261 KEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           + + +   +  + + +  N+++  L   G  D A  LL  M KG+ +             
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM-KGKGL------------- 488

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P+  ++  ++  L ++GK+D A++ F ++ ++G   N   YN+++ GLC + +   +
Sbjct: 489 --KPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRA 546

Query: 379 YELLREMEESGFKPT 393
            + L  M   G KPT
Sbjct: 547 IDFLAYMVARGCKPT 561


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 166/632 (26%), Positives = 292/632 (46%), Gaps = 28/632 (4%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           ++P A  +  LI C   +G +E     F  + + G  V N    + LL+ LC +  VD  
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRV-NVIVISQLLKGLCDAKRVDEA 144

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLV 143
            ++ L  M ++G   D      ++  +   GQ +KA ++F E++D G     V ++ ++ 
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              K   VD+A  + ++M D  ++ +  T+  LIHG++   +  + +Q+ ++M+  G   
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y +++  LCKN +   A   +  M   GI PD  I + L+   + +G L+ +    
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEM---- 320

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGT 319
                        +S + ++V NG +     +   M        +  E + IF    +  
Sbjct: 321 -------------HSFLDLMVGNG-VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP+  SF  +I+ L K G++D A+  F +M   G   N+F++++L+ GLC   + E++ 
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAE 426

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           EL  E+ + G        N++   LC    V+ A  L+  M   G  P V     L+   
Sbjct: 427 ELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGH 486

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+  EA + L  MV  G  P+   Y+  + G    +RVD A  LFR++   G  P V
Sbjct: 487 CLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVV 546

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN I+ GL +  R +EA +L+  MI       + TYN+++NG CK+  +D+A     R
Sbjct: 547 ATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRR 606

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           +  K+    D +T+  +I  L   GR +DA+ L+  +   G  P+ +T+  +   L +  
Sbjct: 607 LCSKDP-QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEG 665

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                   F  M++ G  P+  +  AL+   L
Sbjct: 666 SLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 282/633 (44%), Gaps = 58/633 (9%)

Query: 41  GSVGLVEEANMLFDQV---KREGLCVPNNYSYNCLLEALCKSCSVDLVEM--RLKEMQDY 95
           GS+GL +EA  LFD++    R       N     +  A C S S  +V +  R+      
Sbjct: 26  GSLGL-DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSS 84

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               +  T + L+  +C  G+ +   + F  I+  GW V+  V S LL        VD+A
Sbjct: 85  KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144

Query: 155 CE-LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            + L+ RM +     +   +  +I+GF ++ +V+KA  LF +M   G   +   Y  +I 
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK + ++ A  ++ +M   G+ PD    + LI      G+        W++       
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK--------WKE------- 249

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                ++++L                   E ++  G+E          P+  ++ ++++ 
Sbjct: 250 -----VVQML-------------------EEMSTHGLE----------PDCITYALLLDY 275

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A   F  M + G   +V +Y  L+ G      L E +  L  M  +G  P 
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N MF    ++  +  A+++  KMR QG  P V     LI  LCK G+  +A     
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ EG  P+I  +S+ + GL  + + + A ELF ++   G C D V +N ++  LC   
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV EA+ L + MI  G+ P+V +YN L+ G C +G ID+A   L  M+      P+  TY
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN-GLKPNEFTY 514

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           T L+ G C A R DDA  L+ EM  KG  P   T+  ++ GL +  R   A   +  M  
Sbjct: 515 TILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMIN 574

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              K D++ +  +++          AF++ + +
Sbjct: 575 SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 242/522 (46%), Gaps = 20/522 (3%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F Q+   G+  P+N +YNCL+     +     V   L+EM  +G   D  T 
Sbjct: 211 VVDRAKGVFQQMIDRGV-KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C +G+  +A   F+ +   G   D  +++ILL  ++  G + +    ++ M  
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  N + F ++   + KK+ +++A+ +F+KM + G + D   +  +I  LCK  +++ 
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMR 281
           A+  +++M   G+TP+  + S L+      G+     +  +E  D+ +    +  N++M 
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMC 449

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L + G + +A  L+  MI+      VGV           PN  S++ ++      G++D
Sbjct: 450 NLCNEGRVMEAQRLIDLMIR------VGVR----------PNVISYNTLVAGHCLTGRID 493

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L   M   G   N F Y  L+ G C + R++++Y L REM   G  P   T N++ 
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L +      A  L   M     +  +    +++  LCK+    EAF+    +  +   
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            D V ++  IG L+   R + A++LF  I A+G  PDVV Y +I   L +   + E + L
Sbjct: 614 LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGL 673

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           F+ M   G  P+    N L+      G+I +A + L ++ EK
Sbjct: 674 FSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 171/654 (26%), Positives = 296/654 (45%), Gaps = 62/654 (9%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           ++ L  DVV   C M+          L   G VEEA  +F +++  G+ VPN +SY  L+
Sbjct: 115 VKSLVPDVVTYTCIMN---------GLCKSGKVEEAKSVFREMEEVGV-VPNRFSYATLI 164

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
           ++L K  +V    +    M   G G+D    T L+     +G  + A  +F  +++   V
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
              V +S L+    K G+V+K   L++ M++ +I  N   +  ++ G+ KK  +++A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             KM +     +  +Y  +I G  K  Q  +AL L+ EMK  G+  +             
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN------------- 331

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                                 + +S +  L  +G +++A  L + M+            
Sbjct: 332 --------------------NFVIDSFVNNLKRSGRMEEADELFKDMMS----------- 360

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +G + P+  ++  +++   K GK   A ++ +EMT+     +V  YN LI+GL   
Sbjct: 361 ----RGLL-PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + E S      M + G  P   T N+M    C+  ++  AL L+ +M+  G +P     
Sbjct: 416 GKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITC 474

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +L++ LC  G+  +    L DM+  GF P    + A +      +R D+ L +   +  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVG 534

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D+  YN +IS  C+   +  A  +F +M+ KG++  + TYN LI+G+C S ++ +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A    S+ML  E  SP+V TY  L+ GL  A    +A  L N+M+E+G  PN  T+  L+
Sbjct: 595 AFAVHSQML-TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G  K    +  +  +  M  KG  P    +  LIS F        A E+++EM
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 254/548 (46%), Gaps = 23/548 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC +G+  +A+ +   +   G   + V ++ L+  F K G++  A +L+  +   N
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N  T+  LI  + K   ++ AL ++D+MT      D   Y  I+ GLCK+ ++E A 
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            ++ EM+  G+ P+    + LI S   EG +    +++     R +    ++  ++M  L
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  + A ++ Q ++                + ++ PN  ++  +I+   K G ++  
Sbjct: 203 FKAGMANNAEDMFQVLL----------------EESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L +EM +     NV +Y++++DG      L E+ +++R+M +    P  F   ++   
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +      AL+L ++M+ +G E         +  L + G+  EA     DM+  G LPD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y++ + G     +   A  + +++       DVVAYN++I+GL K  +  E+E    
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCI 582
            M   GL P  AT+N +IN +CK GN+  A+  L+ M  K  G  P+ IT   L+  LC 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM--KSYGLKPNSITCNILVQRLCA 483

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG  +  + L N+M   G  P   T  A++    K  R    L     +   G+K D+  
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLST 543

Query: 643 FVALISAF 650
           +  LIS F
Sbjct: 544 YNTLISTF 551



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 226/505 (44%), Gaps = 52/505 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           EH F++L+  + + GE+ +A EL+E M       +  T+  L++GF K   +  A +L  
Sbjct: 18  EH-FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +++      +   Y  +I   CK++ LE AL +Y EM    + PD               
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD--------------- 121

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                            +T  C  IM  L  +G +++A ++ + M       +VGV    
Sbjct: 122 ----------------VVTYTC--IMNGLCKSGKVEEAKSVFREM------EEVGV---- 153

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  S+  +I++L K+G +  A  L   M   G   +V +Y  L+DGL  +  
Sbjct: 154 ------VPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              + ++ + + E    P   T +++    C+  DV     L+++M  +   P V   + 
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++    K G   EA   +  MVQ   LP++  Y   I G     +  +AL+LF+++ + G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              +    +  ++ L ++ R+ EA++LF +M+++GL+P    Y  +++G+ K+G    A 
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M EK SG  DV+ Y  LI+GL   G+ +        M + G AP+  TF  +I  
Sbjct: 388 NIAQEMTEKSSGF-DVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINA 445

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPD 639
            CK      AL     MK  G+KP+
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPN 470



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 1/340 (0%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+++I+   ++G++  A+ L   M   G   ++  YN L++G C    L  + +L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
               +P   T  ++    C+ Q +  AL +  +M V+   P V   T ++  LCK GK  
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA     +M + G +P+   Y+  I  L     V  A  L   +   G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL KA     AED+F  ++ + L+P+  TY+ LI+G CK G++++  L L  M EK   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI- 258

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+VI Y++++DG    G  ++A+ +  +M ++   PN   +  LI G  K D+   AL 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F+ MK +G++ + FV  + ++          A E+ K+M
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 172/381 (45%), Gaps = 17/381 (4%)

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG I +A  LL+ M    P                +P+  +++ ++N   K G L  A  
Sbjct: 30  NGEISRAVELLEGMKTEGP----------------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  E++ +    NV  Y  LID  C S  LE++  +  EM      P   T   +   LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A ++ R+M   G  P       LI  L K G   EAF     MV  G   D+V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A + GL      + A ++F+ +      P+ V Y+ +I G CK   V + E L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             K + P+V  Y+ +++G+ K G +++AM  + +M+++    P+V  Y TLIDG   A +
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI-LPNVFVYGTLIDGYFKADQ 312

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A+ L+ EM+ +G   N     + +  L +  R   A   F+ M  +G+ PD   + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           ++  F        AF + +EM
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM 393



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/607 (22%), Positives = 252/607 (41%), Gaps = 82/607 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           L+  L   G+   A  +F  +  E L VPN  +Y+ L++  CK   V+  E+ L+EM++ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESL-VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 95  --------YGWGYDKYTLTPLLQV--------------------------YCNSGQFDKA 120
                   Y    D YT   LL                            Y  + Q   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 121 LSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L +F E+   G ++E+ F I   +    + G +++A EL + M    +  +   +  ++ 
Sbjct: 317 LDLFKEMKSRG-LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K  +   A  +  +MT+     D   Y+V+I GL K  + E +   ++ M+  G+ P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    + +I +   EG L   +K + E +   +   ++ CN +++ L + G I++  +LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M            ++M F     P  ++   +++   K  + D+ L +  ++  +G  
Sbjct: 495 NDM------------LVMGF----HPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  YN LI   C    +  +  + ++M   G      T N++    C    +  A  +
Sbjct: 539 LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAV 598

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +G  P V+   +L+  L       EA   +  M + G +P+   Y   + G   
Sbjct: 599 HSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGK 658

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I  +   ++L+ ++   G  P    YN++IS   K +++++A++L  EM  +G+ P+ +T
Sbjct: 659 IGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++LI GW K     +    L R  + E                        A  L+ EM
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAE------------------------AKRLFEEM 754

Query: 597 EEKGCAP 603
            EKG  P
Sbjct: 755 NEKGFIP 761


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 168/609 (27%), Positives = 267/609 (43%), Gaps = 93/609 (15%)

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILL 142
           LV +RL  M D G      TL+ +L       QF  AL +F+EI+  G   D +V++ ++
Sbjct: 165 LVVVRL--MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            +  +  +  +A E+I RM+     L+  T+ V I G  K  RV +A+++ + ++  G  
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           +D   Y  ++ GLCK ++ E   ++ +EM   G  P    +S L+               
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG------------- 329

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                               L   G+I  A++L+                  + K  V+P
Sbjct: 330 --------------------LRKKGNIGSAFDLVNK----------------VKKFGVAP 353

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +   ++ +IN++ KDGKLD A SLF  M   G   N   Y+ LID  C   +L+ +   L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M E G K T +  +S+    C+   +  A +L  +M   G +P V   T LI   CK 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+   AFR   +M  +G  P+   ++A I GL    R+  A +LF ++      P+ V Y
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS---- 558
           N++I G CK      A +L +EM+ KGL+P   TY  LI+G C +G + +A   ++    
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 559 ---RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR---------- 605
              ++ E E   P+V+TYT LI+GLC  G  D A +L  EM      PN+          
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653

Query: 606 ------------------------ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                                   +T+  LI G CK  R + A      M + G+ PD  
Sbjct: 654 TSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 642 VFVALISAF 650
            +  +I  +
Sbjct: 714 SYSTIIYEY 722



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 268/612 (43%), Gaps = 67/612 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR--LKEMQDYGWGYDKYTLTPLLQ 109
           LFD++   GL  P+ Y Y  ++ +LC+    D +  R  +  M+  G      T    ++
Sbjct: 202 LFDEIVSSGL-RPDVYVYTAVVRSLCEL--KDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 110 VYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
             C + +  +A+ + N +   G   D   +  L++   K  E +   E++  M +     
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +E     L+ G  KK  +  A  L +K+ K G A    +Y+ +I  +CK+ +L+ A  L+
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSN 286
           + M   G+ P+    S LI S    G+L + +  + +  +V     +   +S++      
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +  A +L   MI                   + PN   +  +I+   K+G+L  A  L
Sbjct: 439 GKLRAAKSLFDEMIAN----------------GLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           + EMT  G   N + +  LI GLC++NR+ E+ +L  EM E    P   T N +    C+
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-------- 458
             + V A  L+ +M  +G  P       LI  LC  G+  EA  F+ D+  E        
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE 602

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD-------------------- 498
           G LP++V Y+A I GL  I  +D A  L R++ A    P+                    
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662

Query: 499 --------------VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
                          V YNI+I G CK  R+ EA ++   MI  G+ P   +Y+ +I  +
Sbjct: 663 IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 722

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C+ G++ +A+     ML +   +PD + Y  LI G C+ G    A  L ++M  +G  PN
Sbjct: 723 CRRGDLKEAIKLWESMLNR-GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 781

Query: 605 RITFMALITGLC 616
           R T+ +LI G C
Sbjct: 782 RATYNSLIHGTC 793



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 253/570 (44%), Gaps = 30/570 (5%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           S C +S       IR L     V EA  + + +  +GL   +  +Y  L+  LCK    +
Sbjct: 244 SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGL-RADVGTYCTLVLGLCKVEEFE 302

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILL 142
             E  + EM ++G+   +  ++ L+      G    A  + N++   G      V++ L+
Sbjct: 303 AGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALI 362

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            +  K G++D+A  L   M    +  N+ T+ +LI  F K+ ++D AL    KMT+ G  
Sbjct: 363 NSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           +    Y  +I G CK  +L  A  L+ EM  +G+ P+  I + LI+    EGEL    + 
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 263 IWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             E   + ++  T    +++  L     + +A  L   M++   I               
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI--------------- 527

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +++++I    K+G    A  L  EM + G + + + Y  LI GLC++ R+ E+ E
Sbjct: 528 -PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 381 LLREM--------EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + ++        E  G  P   T  ++   LC+   +  A  L R+M      P     
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
              +  L   G   +A + L D++ EGFL + V Y+  I G   + R+  A E+  ++  
Sbjct: 647 ACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 705

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PD ++Y+ II   C+   + EA  L+  M+ +G+ P    YN LI G C +G + +
Sbjct: 706 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTK 765

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           A      M+ +    P+  TY +LI G C+
Sbjct: 766 AFELRDDMM-RRGVKPNRATYNSLIHGTCL 794



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 183/406 (45%), Gaps = 34/406 (8%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+Q  ++     D  V + ++    + P   +   ++N L++  +  +AL LF E+   G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +V++Y  ++  LC       + E++  ME SG   +  T N   R LC+ Q V  A+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +   +  +G    V     L+  LCK  +       + +M++ GF+P     S  + GL
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                +  A +L   +   G  P +  YN +I+ +CK  ++ EAE LFN M  KGL P+ 
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPND 390

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLE-------------------------------- 562
            TY++LI+ +CK G +D A+  L +M E                                
Sbjct: 391 VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450

Query: 563 --KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                  P+V+ YT+LI G C  G   +A  L++EM  KG +PN  TF ALI+GLC  +R
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A   F  M E  + P+   +  LI     E N   AFE+L EM
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 230/488 (47%), Gaps = 29/488 (5%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F +LI  +V+  R    L +   M   G          ++ GL + +Q  MAL L+ E+ 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            SG+ PD  + + ++ S  +       +K+    R+V         I R+  S   +  A
Sbjct: 208 SSGLRPDVYVYTAVVRSLCE-------LKDFIRAREV---------IGRMESSGCDLSVA 251

Query: 293 -YNL-LQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            YN+ ++ + K + + + V ++ L+ +KG +  +  ++  ++  L K  + +    +  E
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G + +    +NL+DGL     +  +++L+ ++++ G  P+ F  N++   +C+   
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A +L   M  +G  P     ++LI   CK GK   A  FL  M + G    +  YS+
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   + ++  A  LF ++ A+G  P+VV Y  +ISG CK   +  A  L++EM  KG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+  T+  LI+G C +  + +A      M+E     P+ +TY  LI+G C  G    A
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV-IPNEVTYNVLIEGHCKEGNTVRA 549

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK--------PDMF 641
             L +EM EKG  P+  T+  LI+GLC   R   A      ++ +  K        P++ 
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVV 609

Query: 642 VFVALISA 649
            + ALI+ 
Sbjct: 610 TYTALING 617



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 209/468 (44%), Gaps = 39/468 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  +   G ++EA  LF+ +  +GL  PN+ +Y+ L+++ CK   +D+    L +M + 
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGL-FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G     Y  + L+  +C  G+   A S+F+E+I +G     V ++ L+  + K GE+  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   M    I  N  TF  LI G    +R+ +A +LF +M +     +   Y+V+I G
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-------- 266
            CK      A +L  EM   G+ PD      LI+     G ++   +E   D        
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE-AREFMNDLQGEQQKL 598

Query: 267 -------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                   +V T T L N + +I    G +D+A  L + M+    +              
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKI----GLMDKAELLCREMLASNSL-------------- 640

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN +++   ++ L  +G ++ A+ L   + + G + N   YN LI G C   R++E+ 
Sbjct: 641 --PNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAA 697

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           E+L  M +SG  P   + +++    CRR D+  A+ L   M  +G  P       LI   
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
           C  G+  +AF    DM++ G  P+   Y++ I G   +  V    + F
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 1/343 (0%)

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T  FD++I T +++ +    L + R M   G +  +   + +++GL    +   +  L  
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           E+  SG +P  +   ++ R LC  +D + A  ++ +M   G +  V    + I+ LCK+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  EA      +  +G   D+  Y   + GL  ++  +   E+  ++   G  P   A +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ GL K   +  A DL N++   G+ PS+  YN LIN  CK G +D+A    + M  K
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               P+ +TY+ LID  C  G+ D A+    +M E G       + +LI+G CK  + RA
Sbjct: 385 -GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F  M   G+KP++ ++ +LIS +  E     AF +  EM
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 263/550 (47%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+ +F E+I    +   V FS      +   + +   +  ++M+   I  N  T  ++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  +   A  +  K+ K G+  D   ++ +I GLC   ++  A+ L + M  +G 
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P                               N +T   NSI+  +  +G    A +LL
Sbjct: 167 QP-------------------------------NVVTY--NSIVNGICKSGDTSLALDLL 193

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +    ADV                 ++  II++L +DG +D A+SLF+EM   G  
Sbjct: 194 RKMDERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 237

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  YN+L+ GLC + +  +  +LL++M      P   T N +     +   +  A  L
Sbjct: 238 SSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANEL 297

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++M  +G  P       L+   C   +  EA   L  MV+    PDIV +++ I G   
Sbjct: 298 YKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCK 357

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +KRVD  ++LFR I   G   + V Y+I++ G C++ ++  AE+LF EM++ G++P V T
Sbjct: 358 VKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT 417

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y +L++G C +G +++A+      L+K   + D++ YT +I+G+C  G+ +DA  L+  +
Sbjct: 418 YGILLDGLCDNGKLEKALEIFED-LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  PN +T+  +I+GLCK      A +  R M+E G +P+   +  LI A L + + 
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDL 536

Query: 657 PLAFEVLKEM 666
             + ++++EM
Sbjct: 537 TASAKLIEEM 546



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 239/512 (46%), Gaps = 51/512 (9%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
           K+M+  G  ++ YTL  ++  +C   +   A SV  +++  G+  D   F+ L+      
Sbjct: 89  KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            +V +A  L+ RM +   + N  T+  +++G  K      AL L  KM +    +D   Y
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             II  LC++  ++ A+ L+ EM+  GI       S L+T                    
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIK------SSLVTY------------------- 243

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                   NS++  L   G  +    LL+ M   + I                PN  +F+
Sbjct: 244 --------NSLVGGLCKAGKWNDGVQLLKDMTSRKII----------------PNVITFN 279

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I+  +K+GKL  A  L++EM   G   N   YN+L+DG C  NRL E+  +L  M  +
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T  S+ +  C+ + V   + L RK+  +G        ++L++  C+ GK   A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                +MV  G LPD++ Y   + GL D  +++ ALE+F D+       D+V Y III G
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEG 459

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           +CK  +V +A +LF  +  KG+ P+V TY ++I+G CK G++ +A + L +M E++   P
Sbjct: 460 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNEP 518

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +  TY TLI      G    +  L  EM+  G
Sbjct: 519 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 1/314 (0%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A+ LF+EM +   + ++  ++    G+ ++ +     +  ++ME +G     +T
Sbjct: 43  DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           LN M  C CR      A +++ K+   G+EP       LI  LC   K  EA   +  MV
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P++V Y++ + G+       LAL+L R +       DV  Y+ II  LC+   + 
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A  LF EM TKG+  S+ TYN L+ G CK+G  +  +  L  M  ++   P+VIT+  L
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI-IPNVITFNVL 281

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID     G+  +A  L+ EM  KG +PN IT+ +L+ G C  +R   A     +M     
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341

Query: 637 KPDMFVFVALISAF 650
            PD+  F +LI  +
Sbjct: 342 SPDIVTFTSLIKGY 355



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/532 (22%), Positives = 236/532 (44%), Gaps = 26/532 (4%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL--CVPNNYSYNCLLE 74
           L Q++++SR    P  + F  R    V   ++ N++ D  K+  L     N Y+ N ++ 
Sbjct: 52  LFQEMIRSRPL--PSLVDF-SRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             C+ C        L ++   G+  D  T   L+   C   +  +A+ +   ++++G   
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             V ++ ++    K G+   A +L+ +MD+ N++ +  T+  +I    +   +D A+ LF
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +M   G  S    Y+ ++GGLCK  +    +QL  +M    I P+    + LI     E
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           G+L     E++++   + ++  T+  NS+M        + +A N+L  M+          
Sbjct: 289 GKLQ-EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMV---------- 337

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +   SP+  +F  +I    K  ++D  + LFR++++ G + N   Y+ L+ G C
Sbjct: 338 ------RNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            S +LE + EL +EM   G  P   T   +   LC    +  AL +   ++       + 
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T++I+ +CK GK  +A+     +  +G  P+++ Y+  I GL     +  A  L R +
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 511

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
              G  P+   YN +I    +   +  +  L  EM + G     ++  ++I+
Sbjct: 512 EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)

Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           VCY   +  G++DIK  D A++LF+++      P +V ++   SG+   ++     D   
Sbjct: 31  VCYGERLRSGIVDIKEDD-AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCK 89

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +M   G+  ++ T N++IN +C+      A   L +++ K    PD  T+ TLI+GLC+ 
Sbjct: 90  KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLINGLCLE 148

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            +  +A++L   M E GC PN +T+ +++ G+CK      AL   R M E+ +K D+F +
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +   +     A  + KEM
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEM 231


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 171/654 (26%), Positives = 296/654 (45%), Gaps = 62/654 (9%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           ++ L  DVV   C M+          L   G VEEA  +F +++  G+ VPN +SY  L+
Sbjct: 115 VKSLVPDVVTYTCIMNG---------LCKSGKVEEAKSVFREMEEVGV-VPNRFSYATLI 164

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
           ++L K  +V    +    M   G G+D    T L+     +G  + A  +F  +++   V
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
              V +S L+    K G+V+K   L++ M++ +I  N   +  ++ G+ KK  +++A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             KM +     +  +Y  +I G  K  Q  +AL L+ EMK  G+  +             
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN------------- 331

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                                 + +S +  L  +G +++A  L + M+            
Sbjct: 332 --------------------NFVIDSFVNNLKRSGRMEEADELFKDMMS----------- 360

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +G + P+  ++  +++   K GK   A ++ +EMT+     +V  YN LI+GL   
Sbjct: 361 ----RGLL-PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + E S      M + G  P   T N+M    C+  ++  AL L+ +M+  G +P     
Sbjct: 416 GKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITC 474

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +L++ LC  G+  +    L DM+  GF P    + A +      +R D+ L +   +  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVG 534

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D+  YN +IS  C+   +  A  +F +M+ KG++  + TYN LI+G+C S ++ +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A    S+ML  E  SP+V TY  L+ GL  A    +A  L N+M+E+G  PN  T+  L+
Sbjct: 595 AFAVHSQML-TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G  K    +  +  +  M  KG  P    +  LIS F        A E+++EM
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 254/548 (46%), Gaps = 23/548 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC +G+  +A+ +   +   G   + V ++ L+  F K G++  A +L+  +   N
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N  T+  LI  + K   ++ AL ++D+MT      D   Y  I+ GLCK+ ++E A 
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            ++ EM+  G+ P+    + LI S   EG +    +++     R +    ++  ++M  L
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  + A ++ Q ++                + ++ PN  ++  +I+   K G ++  
Sbjct: 203 FKAGMANNAEDMFQVLL----------------EESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L +EM +     NV +Y++++DG      L E+ +++R+M +    P  F   ++   
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +      AL+L ++M+ +G E         +  L + G+  EA     DM+  G LPD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y++ + G     +   A  + +++       DVVAYN++I+GL K  +  E+E    
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCI 582
            M   GL P  AT+N +IN +CK GN+  A+  L+ M  K  G  P+ IT   L+  LC 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM--KSYGLKPNSITCNILVQRLCA 483

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG  +  + L N+M   G  P   T  A++    K  R    L     +   G+K D+  
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLST 543

Query: 643 FVALISAF 650
           +  LIS F
Sbjct: 544 YNTLISTF 551



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 224/484 (46%), Gaps = 36/484 (7%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           IR + + F VLI G+ +   + +A++L + M   G A D   Y+ ++ G CK   L  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 226 QLYSEMKGSGITPDFEILSKLI-----TSCSDEG-----ELTLLVKEIWEDRDVNTMTLL 275
           +L  E+    + P+    + LI     + C ++      E+T  VK +  D     +T  
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMT--VKSLVPD----VVTYT 126

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           C  IM  L  +G +++A ++ + M       +VGV           PN  S+  +I++L 
Sbjct: 127 C--IMNGLCKSGKVEEAKSVFREM------EEVGV----------VPNRFSYATLIDSLF 168

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G +  A  L   M   G   +V +Y  L+DGL  +     + ++ + + E    P   
Sbjct: 169 KEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCV 228

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++    C+  DV     L+++M  +   P V   + ++    K G   EA   +  M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           VQ   LP++  Y   I G     +  +AL+LF+++ + G   +    +  ++ L ++ R+
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA++LF +M+++GL+P    Y  +++G+ K+G    A      M EK SG  DV+ Y  
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF-DVVAYNV 407

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI+GL   G+ +        M + G AP+  TF  +I   CK      AL     MK  G
Sbjct: 408 LINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 636 MKPD 639
           +KP+
Sbjct: 467 LKPN 470



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 1/340 (0%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+++I+   ++G++  A+ L   M   G   ++  YN L++G C    L  + +L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
               +P   T  ++    C+ Q +  AL +  +M V+   P V   T ++  LCK GK  
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA     +M + G +P+   Y+  I  L     V  A  L   +   G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL KA     AED+F  ++ + L+P+  TY+ LI+G CK G++++  L L  M EK   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI- 258

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+VI Y++++DG    G  ++A+ +  +M ++   PN   +  LI G  K D+   AL 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F+ MK +G++ + FV  + ++          A E+ K+M
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 172/381 (45%), Gaps = 17/381 (4%)

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG I +A  LL+ M    P                +P+  +++ ++N   K G L  A  
Sbjct: 30  NGEISRAVELLEGMKTEGP----------------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  E++ +    NV  Y  LID  C S  LE++  +  EM      P   T   +   LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A ++ R+M   G  P       LI  L K G   EAF     MV  G   D+V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A + GL      + A ++F+ +      P+ V Y+ +I G CK   V + E L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             K + P+V  Y+ +++G+ K G +++AM  + +M+++    P+V  Y TLIDG   A +
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI-LPNVFVYGTLIDGYFKADQ 312

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A+ L+ EM+ +G   N     + +  L +  R   A   F+ M  +G+ PD   + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           ++  F        AF + +EM
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM 393



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 136/607 (22%), Positives = 252/607 (41%), Gaps = 82/607 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           L+  L   G+   A  +F  +  E L VPN  +Y+ L++  CK   V+  E+ L+EM++ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESL-VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 95  --------YGWGYDKYTLTPLLQV--------------------------YCNSGQFDKA 120
                   Y    D YT   LL                            Y  + Q   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 121 LSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L +F E+   G ++E+ F I   +    + G +++A EL + M    +  +   +  ++ 
Sbjct: 317 LDLFKEMKSRG-LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K  +   A  +  +MT+     D   Y+V+I GL K  + E +   ++ M+  G+ P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    + +I +   EG L   +K + E +   +   ++ CN +++ L + G I++  +LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M            ++M F     P  ++   +++   K  + D+ L +  ++  +G  
Sbjct: 495 NDM------------LVMGF----HPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  YN LI   C    +  +  + ++M   G      T N++    C    +  A  +
Sbjct: 539 LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAV 598

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +G  P V+   +L+  L       EA   +  M + G +P+   Y   + G   
Sbjct: 599 HSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGK 658

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I  +   ++L+ ++   G  P    YN++IS   K +++++A++L  EM  +G+ P+ +T
Sbjct: 659 IGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++LI GW K     +    L R  + E                        A  L+ EM
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAE------------------------AKRLFEEM 754

Query: 597 EEKGCAP 603
            EKG  P
Sbjct: 755 NEKGFIP 761


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 192/750 (25%), Positives = 330/750 (44%), Gaps = 141/750 (18%)

Query: 4   ILSRARRIAPLRVLAQ--------------DVVKSRCFMSPGALGFLIRCLGSVGLVEEA 49
           IL+RARR    R L                +V +   F S  +   L+R     G +  A
Sbjct: 109 ILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTF-SAVSFDLLLRAHADAGQLSSA 167

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
             +FD + + G C P+  S N LL  L +S    +  M   +M+  G   D++T+  + +
Sbjct: 168 LNVFDGMGKVG-CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 110 VYCNSGQFDKA---------------LSVFNEIID----HGWVDEH-------------- 136
            YC  G+  +A               L  ++ ++D     GW ++               
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 137 ---VFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
               +++L+  + K G +++A  +++ M +  +I ++E  + ++I+G+ ++ R+D A ++
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
            ++M  +G   +  +Y+ +I GLCK  ++E   ++  EM+  G+ PD    + LI     
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYN-LLQAMIKGEPIADVG 309
           EG +    ++ +E         +C    R++V NG  +    YN LL+       I D  
Sbjct: 407 EGSM----RKAFE---------MC----RMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
               ++ K  V+PN  S   +++ L K GK + AL+L++E    G  +NV  +N +I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-- 427
           C   R+ E+ ELL  M+E    P   T  ++F   C+   +  A +L+ KM   G  P  
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 428 ---------------WVKHNTL------------------LIKELCKHGKAMEAFRFLTD 454
                          W K N +                  LI   CK G   EA     +
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 455 MVQEGFLPDIVCYSAAIG-----------------------------GLIDIKRVDLALE 485
           MV  G  P++   SA +                                I+I ++   ++
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
              D   H      V +N+II GLCK+ R+A+A+ LF  +  K  +P   TY+ LI+G  
Sbjct: 690 TIADGNPHSAN---VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
            SG+ID+A   L  ++     +P++ITY +LI GLC +G+   A+ L+N+++ KG +PN 
Sbjct: 747 ASGSIDEA-FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           IT+  LI   CK  +   A    + M E+G
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 157/633 (24%), Positives = 281/633 (44%), Gaps = 73/633 (11%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG-W 97
           C   +G  E+A  + + ++R+GL  PN  +Y  L++  CK   ++  E  +KEM++ G  
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLS-PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACE 156
             D+     ++  YC  G+ D A  V NE+ D G  V+  V++ ++    K G +++  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +++ M+D  +R ++ ++  LI G+ ++  + KA ++   M ++G A+    Y+ ++ G C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 217 KNKQLEMALQLYSEMKGSGITPD----FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
               ++ AL+L+  M   G+ P+      +L  L  +   E  L L  + +      N +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------------IADVGVEMLMIF 316
           T   N+++  L   G + +A  LL  M  ++  P              +  +G    ++ 
Sbjct: 501 TF--NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 317 KGT---VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           K      +P+   F+  I       +      +  EM+  G   N+  Y  LI G C   
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------- 423
            L E+  L  EM  +G  P  F  +++  C  +   V  A NLV +  V           
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLVLQKLVNIDMIPGCSIS 677

Query: 424 ------------------GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                              H   V  N ++   LCK G+  +A      +  + FLPD  
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFG-LCKSGRIADAKSLFESLRNKRFLPDNF 736

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS+ I G      +D A  L   + + G  P+++ YN +I GLCK+ +++ A +LFN++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE---------------KESGSPDV 570
            +KG+ P+  TYN LI+ +CK G   +A     +M+E               + +  P+ 
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNY 856

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           ITY TLI G   +G  ++   L++EM  +G  P
Sbjct: 857 ITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 254/549 (46%), Gaps = 52/549 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           LL+ + ++GQ   AL+VF+ +   G        + LL    + G+   A  +  +M    
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  +E T  ++   + +  RV +A++  ++M   G   +   Y  ++   C     E A 
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           ++   ++  G++P+      ++T        TLLVK   +D                   
Sbjct: 274 RILESLQRKGLSPN------VVT-------YTLLVKGYCKD------------------- 301

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G +++A  +++ M +                G +  +  ++ ++IN   + G++D A  
Sbjct: 302 -GRMEEAERVVKEMKE---------------TGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  EM   G   N+F+YN +I+GLC   R+EE  ++L+EME+ G +P  ++ N++    C
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 406 RRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R   +  A  + R M   G     + +NTLL K  C      +A R    M++ G  P+ 
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLL-KGFCSLHAIDDALRLWFLMLKRGVAPNE 464

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           +  S  + GL    + + AL L+++  A G   +V+ +N +I+GLCK  R+AEAE+L + 
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M      P   TY  L +G+CK G +  A   +++M E    +P V  + + I G  IA 
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM-EHLGFAPSVEMFNSFITGHFIAK 583

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +      + +EM  +G +PN +T+ ALI G CK      A   +  M   GM P++F+  
Sbjct: 584 QWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICS 643

Query: 645 ALISAFLSE 653
           AL+S F  E
Sbjct: 644 ALMSCFYKE 652



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 257/577 (44%), Gaps = 77/577 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +G +EE   +  +++  G+  P+ YSYN L++  C+  S+       + M   
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGM-RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 96  GWGYDKYTLTPLLQVYCN-----------------------------------SGQFDKA 120
           G      T   LL+ +C+                                   +G+ ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L+++ E +  G     + F+ ++    K G + +A EL++RM +     +  T+  L  G
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K  ++  A  L +KM   GFA    M++  I G    KQ      ++SEM   G++P+
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 240 FEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
                 LI     EG L       +E  +  +N    +C+++M      G +D+A  +LQ
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 298 A-----MIKGEPIADVGVEMLMIFKGTVS---PNTSS--FDIIINTLLKDGKLDLALSLF 347
                 MI G  I+ + ++ +     T++   P++++  +++II  L K G++  A SLF
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             +     + + F Y++LI G   S  ++E++ L   M  +G  P   T NS+   LC+ 
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 408 QDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
             +  A+NL  K++ +G  P  + +NTL I E CK GK  EAF+    MV+EG++ +   
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTL-IDEYCKEGKTTEAFKLKQKMVEEGYMEE--- 839

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
                           A++L   +  +   P+ + Y  +I G  K+  + E   L++EM 
Sbjct: 840 ----------------AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMH 883

Query: 527 TKGLIPSVATYN------LLINGWC-KSGNIDQAMLC 556
            +GL+P+    N      +++N W  K G++     C
Sbjct: 884 IRGLLPTNWIGNWKRSDPVVVNNWNRKDGHMKTYSQC 920



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 16/339 (4%)

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG----------- 389
           D AL LFR         ++  +  L+  L  + R  ++  LL  +               
Sbjct: 85  DAALHLFRLAPS---RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 390 --FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
             F  +  + + + R       +  ALN+   M   G  P ++    L+ +L + G    
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M   G LPD    +          RV  A+E   ++   G   ++VAY+ ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
             C      +A  +   +  KGL P+V TY LL+ G+CK G +++A   +  M E     
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            D + Y  +I+G C  GR DDA  + NEM + G   N   +  +I GLCK  R       
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + M++ GM+PD + +  LI  +  E +   AFE+ + M
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 257/543 (47%), Gaps = 24/543 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +N L  A+ K+   +LV    K+M+  G  +  YTL+ ++  +C   +   A S
Sbjct: 85  LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              +I+  G+  D  +F+ LL        V +A EL++RM +   +    T   L++G  
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              +V  A+ L D+M ++GF  +   Y  ++  +CK+ Q  +A++L  +M+   I  D  
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 242 ILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             S +I     +G L     L  E+ E +      +  N+++    + G  D    LL+ 
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MIK +                +SPN  +F ++I++ +K+GKL  A  L +EM Q G   N
Sbjct: 324 MIKRK----------------ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              YN+LIDG C  NRLEE+ +++  M   G  P   T N +    C+   +   L L R
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 419 KMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           +M ++G     V +NT L++  C+ GK   A +   +MV     PDIV Y   + GL D 
Sbjct: 428 EMSLRGVIANTVTYNT-LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             ++ ALE+F  I       D+  Y III G+C A +V +A DLF  +  KG+      Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N++I+  C+  ++ +A +   +M E E  +PD +TY  LI           A  L  EM+
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTE-EGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605

Query: 598 EKG 600
             G
Sbjct: 606 SSG 608



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 266/554 (48%), Gaps = 24/554 (4%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+ +F ++I    +   + F+ L  A +K  + +    L ++M+   I  +  T  ++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  ++  A     K+ K G+  D  +++ ++ GLC   ++  AL+L   M   G 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT----MTLLCNSIMRILVSNGSIDQA 292
            P    L+ L+      G+++  V  +  DR V T      +    ++ ++  +G    A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAV--VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL+ M                 +  +  +   + III+ L KDG LD A +LF EM  
Sbjct: 248 MELLRKM----------------EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++  YN LI G CN+ R ++  +LLR+M +    P   T + +     +   +  
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L+++M  +G  P       LI   CK  +  EA + +  M+ +G  PDI+ ++  I 
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G     R+D  LELFR++   G   + V YN ++ G C++ ++  A+ LF EM+++ + P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + +Y +L++G C +G +++A+    + +EK     D+  Y  +I G+C A + DDA  L
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +  +  KG   +   +  +I+ LC+ D    A + FR M E+G  PD   +  LI A L 
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590

Query: 653 ELNPPLAFEVLKEM 666
           + +   A E+++EM
Sbjct: 591 DDDATTAAELIEEM 604



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 26/437 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A +L D++   G   PN  +Y  +L  +CKS    L    L++M++     D   
Sbjct: 207 GKVSDAVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + ++   C  G  D A ++FNE+   G+  D   ++ L+  F   G  D   +L+  M 
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I  N  TF VLI  FVK+ ++ +A QL  +M + G A +   Y+ +I G CK  +LE
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
            A+Q+   M   G  PD    + LI   C     D+G L L  +        NT+T   N
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG-LELFREMSLRGVIANTVTY--N 442

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++++    +G ++ A  L Q M+                   V P+  S+ I+++ L  +
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRR----------------VRPDIVSYKILLDGLCDN 486

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+L+ AL +F ++ +     ++ +Y  +I G+CN+++++++++L   +   G K      
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N M   LCR+  +  A  L RKM  +GH P      +LI+       A  A   + +M  
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606

Query: 458 EGFLPDIVCYSAAIGGL 474
            GF  D+      I  L
Sbjct: 607 SGFPADVSTVKMVINML 623



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 158/316 (50%), Gaps = 3/316 (0%)

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D A+ LFR+M Q   +  V  +N L   +  + + E    L ++ME  G   + +TL+
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            M  C CR + +  A + + K+   G+EP  V  NTLL   LC   +  EA   +  MV+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL-NGLCLECRVSEALELVDRMVE 186

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P ++  +  + GL    +V  A+ L   +   G  P+ V Y  +++ +CK+ + A 
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +L  +M  + +      Y+++I+G CK G++D A    + M E +    D+ITY TLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLI 305

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            G C AGR DD   L  +M ++  +PN +TF  LI    K  + R A    + M ++G+ 
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 638 PDMFVFVALISAFLSE 653
           P+   + +LI  F  E
Sbjct: 366 PNTITYNSLIDGFCKE 381



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 37/219 (16%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF ++   G+ + N  +YN L++  C+S  +++ +   +EM       D  +   LL   
Sbjct: 425 LFREMSLRGV-IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483

Query: 112 CNSGQFDKALSVFNEI------------------------IDHGW------------VDE 135
           C++G+ +KAL +F +I                        +D  W            +D 
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++I++    +   + KA  L  +M +     +E T+ +LI   +       A +L ++
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           M  SGF +D +   ++I  L   +  +  L + S  + S
Sbjct: 604 MKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 249/551 (45%), Gaps = 51/551 (9%)

Query: 117 FDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            D ALS FN ++  H       F+ LL + +K         L  +MD   I  +  T  +
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F    R+  A  +  K+ K G   D   ++ +I GLC   ++  AL L+ +  G G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                             V T   L N + ++    G+   A  L
Sbjct: 251 FQPD-----------------------------VVTYGTLMNGLCKV----GNTSAAIRL 277

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M++                    PN  +++ II++L KD ++  A +LF EM   G 
Sbjct: 278 LRSMVQK----------------NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 321

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN+LI  LCN    +    LL EM  S   P     +++   LC+   +  A +
Sbjct: 322 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 381

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +V  M  +G EP V   T L+   C   +  EA +    MV +G +P++  Y+  I G  
Sbjct: 382 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 441

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I+R+D A+ L   +   G   D V YN +I GLC   R+  A  LF+EM+  G IP + 
Sbjct: 442 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 501

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY +L++  CK+ ++ +AM+ L + +E  +   D++ Y   IDG+C AG  + A  L++ 
Sbjct: 502 TYRILLDYLCKNHHLAEAMVLL-KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 560

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  KG  P+  T+  +I GLCK      A   FR M E G   D  ++  +I  FL    
Sbjct: 561 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNE 620

Query: 656 PPLAFEVLKEM 666
              A ++L+EM
Sbjct: 621 TFGATQLLQEM 631



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 240/525 (45%), Gaps = 22/525 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   D YTL  L+  +C+  +   A SV
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +++  G   D   F+ L+      G++ +A  L ++      + +  T+  L++G  K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +   Y+ II  LCK++Q+  A  L+SEM   GI+PD   
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI +  +  E   +T L+ E+   + +  + +  ++++  L   G I  A++++  M
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF-STVVDALCKEGMIAIAHDVVDMM 386

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK       GVE          P+  ++  +++      ++D A+ +F  M   GC+ NV
Sbjct: 387 IKR------GVE----------PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G C   R++++  LL +M   G      T N++   LC    +  A+ L  +
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +    +L+  LCK+    EA   L  +       DI+ Y+ AI G+     
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A +LF ++ + G  PDV  YNI+I GLCK   + EA  LF +M   G       YN 
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +I G+ +S     A   L  ML  E  S DV T T +++ L   G
Sbjct: 611 IIRGFLRSNETFGATQLLQEML-AEGFSADVSTTTLIVEMLSDDG 654



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 24/424 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G L+  L  VG    A  L   + ++  C PN  +YN ++++LCK   V        EM 
Sbjct: 259 GTLMNGLCKVGNTSAAIRLLRSMVQKN-CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 317

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T   L+   CN  ++    ++ NE+++   + +  VFS ++ A  K G + 
Sbjct: 318 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 377

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A ++++ M    +  +  T+  L+ G   +S +D+A+++FD M   G   +   Y+++I
Sbjct: 378 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 437

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G C+ ++++ A+ L  +M   G+  D    + LI      G L   +    E       
Sbjct: 438 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE------- 490

Query: 273 TLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                     +V++G I        LL  + K   +A+  V +  I    +  +   ++I
Sbjct: 491 ----------MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 540

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            I+ + + G+L+ A  LF  ++  G   +V  YN +I GLC    L+E+ +L R+M+E+G
Sbjct: 541 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG--KAME 447
                   N++ R   R  +  GA  L+++M  +G    V   TL+++ L   G  ++ E
Sbjct: 601 CSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFE 660

Query: 448 AFRF 451
             R 
Sbjct: 661 RLRL 664



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 15/290 (5%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L D L + NR+   +            P+      +   + + +     L+L  +M 
Sbjct: 128 FNTLDDALSSFNRMLHMHP----------PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 177

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P V    +LI   C   +   AF  L  +++ G  PD   ++  I GL    ++ 
Sbjct: 178 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG 237

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL LF      G  PDVV Y  +++GLCK    + A  L   M+ K   P+V  YN +I
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +  CK   + +A    S M+ K   SPD+ TY +LI  LC          L NEM     
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356

Query: 602 APNRITFMALITGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVALISA 649
            PN + F  ++  LCK      A+ H    MM ++G++PD+  + AL+  
Sbjct: 357 MPNVVVFSTVVDALCK--EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 404


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 170/638 (26%), Positives = 294/638 (46%), Gaps = 25/638 (3%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++K+   M   A+  L++ L     V EA  +  Q   E  C+P+  SY  LL+ LC   
Sbjct: 116 ILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEK 175

Query: 81  SVD-LVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV 137
             +  +E+      D+G     +  + + ++  +   GQ DK  ++F E+ID G   + V
Sbjct: 176 RAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVV 235

Query: 138 -FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ ++    K    D+A  + ++M D   + N  T+  LIHG++   +  + +Q+ ++M
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           +  G   D   Y  ++  LCKN +   A   +  M   GI P       LI   + +G L
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-SIDQA-YNLLQAMIKGEPIADVGVEML- 313
           + +                 +S + ++V NG S D   +N+  +      + D  +++  
Sbjct: 356 SEM-----------------HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 398

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            + +  +SPN  ++  +I+ L K G++D A   F +M   G   N+ ++N+L+ GLC  +
Sbjct: 399 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 458

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           + E + EL+ EM + G  P     N++   LC    V+    L+  M   G  P     T
Sbjct: 459 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 518

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   C  G+  EA +    MV  G  P  V Y+  + G     R+D A  LFR++   
Sbjct: 519 PLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 578

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P VV YN I+ GL + +R +EA++L+  MI  G    + TYN+++NG CKS  +D+A
Sbjct: 579 GVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 638

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 +  K     ++IT+T +I  L   GR +DA+ L+  +   G  PN +T+  +  
Sbjct: 639 FKMFQSLCSK-GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            L +          F  M++ G  P+  +  AL+   L
Sbjct: 698 NLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 282/631 (44%), Gaps = 33/631 (5%)

Query: 53  FDQVKRE--GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           F+++ RE      PN  +Y+ L+   C+   ++        +   GW  D   +  LL+ 
Sbjct: 75  FNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKG 134

Query: 111 YCNSGQFDKALSVF-NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
            C+  +  +A+ V    + + G + + V ++ILL         ++A EL+  M D + R 
Sbjct: 135 LCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRR 194

Query: 169 ---NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  ++ ++I+GF  + +VDK   LF +M   G   D   Y  +I GLCK +  + A 
Sbjct: 195 CPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAE 254

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRIL 283
            ++ +M  +G  P+    + LI      G+   +V+ + E   R +        S++  L
Sbjct: 255 GVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYL 314

Query: 284 VSNGSIDQAYNLLQAMIKG---EPIADVGV------------EM-----LMIFKGTVSPN 323
             NG   +A     +MI+      ++  G+            EM     LM+  G +SP+
Sbjct: 315 CKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG-LSPD 373

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              F+I  +   K G +D A+ +F +M Q G   NV  Y  LID LC   R++++     
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M   G  P     NS+   LC       A  LV +M  QG  P       LI  LC  G
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           + ME  R +  M   G  PD   Y+  I G     R D A ++F  + + G  P  V YN
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ G C A R+ +A  LF EM+ KG+ P V TYN +++G  ++    +A      M+  
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN- 612

Query: 564 ESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            SG+  D+ TY  +++GLC +   D+A  ++  +  KG   N ITF  +I  L K  R  
Sbjct: 613 -SGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            A+  F  +   G+ P++  +  +    + E
Sbjct: 672 DAMDLFAAIPANGLVPNVVTYRLVAENLIEE 702



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 237/522 (45%), Gaps = 20/522 (3%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           L + A  +F Q+   G   PNNY+YNCL+           V   L+EM   G   D YT 
Sbjct: 249 LFDRAEGVFQQMIDNGF-KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTY 307

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C +G+  +A   F+ +I  G   +   + IL+  ++  G + +    ++ M +
Sbjct: 308 GSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVE 367

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  +   F +    + K   +DKA+ +F+KM + G + +   Y  +I  LCK  +++ 
Sbjct: 368 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 427

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMR 281
           A   +++M   G+TP+  + + L+       +     + ++E  D+ +    +  N+++ 
Sbjct: 428 AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLIC 487

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L + G + +   L+  M        VGV           P+  S+  +I+     G+ D
Sbjct: 488 NLCNVGRVMEGRRLIDLM------EHVGVR----------PDAFSYTPLISGYCLTGRTD 531

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +F  M  IG       YN L+ G C+++R++++Y L REM   G  P   T N++ 
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L + +    A  L   M   G +  +    +++  LCK     EAF+    +  +G  
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 651

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            +I+ ++  IG L+   R + A++LF  I A+G  P+VV Y ++   L +   + E + L
Sbjct: 652 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 711

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           F+ M   G  P+    N L+      G+I +A   LS++ E+
Sbjct: 712 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 753



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 3/225 (1%)

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A+  F  +     +   P++  YS  IG    +  ++     F  I   G   D +A N 
Sbjct: 71  AVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQ 130

Query: 505 IISGLCKAQRVAEAED-LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           ++ GLC  +RV EA D L   M   G +P   +Y +L+ G C     ++A+  L  M + 
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD 190

Query: 564 ESG--SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P+V++Y+ +I+G    G+ D    L+ EM ++G  P+ +T+  +I GLCK    
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLF 250

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F+ M + G KP+ + +  LI  +LS        ++L+EM
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 253/537 (47%), Gaps = 23/537 (4%)

Query: 115 GQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL-IERMDDCNIRLNEKT 172
           G  D A +    +I  GW  E + FS LL A        +A ++ + RM       N  +
Sbjct: 105 GHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFS 164

Query: 173 FCVLIHGFVKKSRVDKALQLFDKM-----TKSGFASDAAMYDVIIGGLCK-NKQLEMALQ 226
           + +L+ G   ++R  +AL L   M     T+ G+  D   Y+ +I GL +  +QL+ A  
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYH 224

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L+ +M   G++PD    + +I++ S    +        +   V  + ++ N  M   +++
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAM--------DKAAVVLVRMVKNGAMPNRITH 276

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
            S+   Y        G+P   +GV   M   G V P+  +++ ++  L K+G+   A  +
Sbjct: 277 NSLLHGY-----CSSGKPNDAIGVFKRMCRDG-VEPDVFTYNTLMGYLCKNGRSMEARKI 330

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M + G   N   Y  L+ G      L + + LL  M  +G +P H+  N +     +
Sbjct: 331 FDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK 390

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A+ L  KMR QG  P      +++  LC  GK  +A      ++ EG  PD V 
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   I GL    + D A EL  ++   G CP+ + +N +++ LCK   VA A+++F+ M+
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
              +   V TYN LI+G+C  G +D+A   L  M+  +   P+ +TY T+I+G C  GR 
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV-LDGVKPNEVTYNTMINGYCKNGRI 569

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           +DA  L+ +M  KG  P  +T+  ++ GL +  R  AA   +  M + G+K D+  +
Sbjct: 570 EDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTY 626



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/623 (25%), Positives = 270/623 (43%), Gaps = 75/623 (12%)

Query: 62  CVPNNYSYNCLLEALCKSCSVD-----LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSG- 115
           C PN +SY  LL+ LC           L  M + +    G+  D  +   ++      G 
Sbjct: 158 CTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGR 217

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           Q D A  +F++++D G   + V ++ ++ A SK   +DKA  ++ RM       N  T  
Sbjct: 218 QLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHN 277

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+HG+    + + A+ +F +M + G   D   Y+ ++G LCKN +   A +++  M   
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337

Query: 235 GITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G  P+      L+   + EG L  +  + ++     +     + N ++     +G +D A
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   M                 +  ++P+T ++ I+++ L   GK+D A++ F  +  
Sbjct: 398 MLLFSKM----------------RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +  ++ NLI GLC  ++ +++ EL  EM   G  P +   N++   LC+   V  
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 413 ALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A N+   M RV      + +NTL I   C HGK  EA + L  MV +G  P+ V Y+  I
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTL-IDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G     R++ A  LFR + + G  P +V Y+ I+ GL +A+R A A++L+  MI  G+ 
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRM------LEKESGSPDVITYTTLIDGLCIAGR 585
             + TYN+++ G C++   D A+     +      LE         T+  +ID L   GR
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR-------TFNIMIDALLKGGR 673

Query: 586 PDDA----------------IMLW-------------------NEMEEKGCAPNRITFMA 610
            D+A                +  W                     +E+ GC  N     A
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733

Query: 611 LITGLCKCDRPRAALVHFRMMKE 633
           L+  L +    R A V+   + E
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKIDE 756



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 43/398 (10%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF----------------------- 347
            M+M+ +  V PN  ++ ++I+   + G LDLA +                         
Sbjct: 78  RMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC 137

Query: 348 -------------REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-----EESG 389
                        R M  +GC  NVF Y  L+ GLC+ NR +++  LL  M        G
Sbjct: 138 DKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGG 197

Query: 390 FKPTHFTLNSMFRCLCRR-QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           + P   + N++   L R  + +  A +L  +M  QG  P V     +I  L K     +A
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L  MV+ G +P+ + +++ + G     + + A+ +F+ +C  G  PDV  YN ++  
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  R  EA  +F+ M+ +G  P+ ATY  L++G+   G++ + M  L  M+ +    P
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVK-MHHLLDMMVRNGIQP 376

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D   +  LI      G+ DDA++L+++M  +G  P+ +T+  ++  LC   +   A+  F
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQF 436

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +  +G+ PD  VF  LI    +      A E+  EM
Sbjct: 437 GRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/543 (23%), Positives = 243/543 (44%), Gaps = 28/543 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  +I  L     +++A ++  ++ + G  +PN  ++N LL   C S   +  
Sbjct: 234 LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG-AMPNRITHNSLLHGYCSSGKPNDA 292

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
               K M   G   D +T   L+   C +G+  +A  +F+ ++  G   +   +  LL  
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHG 352

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           ++  G + K   L++ M    I+ +   F +LI  + K  +VD A+ LF KM + G   D
Sbjct: 353 YATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLL 259
              Y +++  LC   +++ A+  +  +   G+TPD  +   LI   C+    D+ E  L 
Sbjct: 413 TVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAE-ELA 471

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           V+ I   R +    +  N+++  L   G + +A N+   M++ +   DV           
Sbjct: 472 VEMIG--RGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV----------- 518

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
                 +++ +I+     GK+D A  L   M   G   N   YN +I+G C + R+E+++
Sbjct: 519 -----ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            L R+M   G  P   T +++ + L + +    A  L   M   G +  +    +++  L
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C++    +A R   ++    F  +   ++  I  L+   R D A +LF  + A G  P+V
Sbjct: 634 CQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 693

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y +++  L +   + E +DLF  +   G   +    N L+    + G + +A + LS+
Sbjct: 694 VTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSK 753

Query: 560 MLE 562
           + E
Sbjct: 754 IDE 756



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI      G V++A +LF +++R+GL  P+  +Y  +++ALC    VD    +   +  
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLN-PDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDK 153
            G   D      L+   C   ++DKA  +  E+I  G    ++F + LL    K G V +
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  + + M   +++ +  T+  LI G+    +VD+A +L + M   G   +   Y+ +I 
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI--------TSCSDEGELTLLVKEIWE 265
           G CKN ++E A  L+ +M   G+ P     S ++        T+ + E  L ++   I  
Sbjct: 562 GYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKF 621

Query: 266 DRDVNTMTLL-------CNSIMRILVSNGSID-----QAYNLL-QAMIKG---EPIADVG 309
           D     + LL        +  +RI  +   ID     + +N++  A++KG   +   D+ 
Sbjct: 622 DIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLF 681

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
             +L   +G V PN  ++ +++ +L++ G L+    LF  + + GC  N  + N L+  L
Sbjct: 682 ASLLA--RGLV-PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKL 738

Query: 370 CNSNRLEESYELLREMEESGF 390
                + ++   L +++E+ F
Sbjct: 739 LQKGEVRKAGVYLSKIDENNF 759



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 8/229 (3%)

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A+  FR +  + +    P+++ YS  I     +  +DLA      +   G   + + ++ 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 505 IISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-- 561
           ++  LC  +R +EA D+    M   G  P+V +Y +L+ G C      QA+  L  M+  
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 562 --EKESGSPDVITYTTLIDGLCIAGRP-DDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
              +    PDV++Y T+I+GL   GR  D A  L+++M ++G +P+ +T+ ++I+ L K 
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251

Query: 619 DR-PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               +AA+V  RM+K   M P+     +L+  + S   P  A  V K M
Sbjct: 252 RAMDKAAVVLVRMVKNGAM-PNRITHNSLLHGYCSSGKPNDAIGVFKRM 299


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 240/517 (46%), Gaps = 53/517 (10%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +E   +I L    + GE+++  + +ERM       +      LI GF +  +  KA ++ 
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + +  SG   D   Y+V+IGG CK+ +++ ALQ+   M    + PD              
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDV------------- 209

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                               +  N+I+R L  +G + +A  +L   ++ E          
Sbjct: 210 --------------------VTYNTILRSLCDSGKLKEAMEVLDRQMQRE---------- 239

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P+  ++ I+I     D  +  A+ L  EM + GC  +V  YN LI+G+C   
Sbjct: 240 ------CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+E+ + L  M   G +P   T N + R +C     + A  L+  M  +G  P V    
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI  LC+      A   L  M + G +P+ + Y+  + G    K++D A+E    + + 
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PD+V YN +++ LCK  +   A ++ N++ +KG  P + TYN +I+G  K G  + A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L  M  ++   PD+ITY+TL+ GL   G+ D+AI ++++ME     P+ +T+ A++ 
Sbjct: 474 AELLEEM-RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIML 532

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GLCK  +   A+     M EKG KP    +  LI   
Sbjct: 533 GLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 215/453 (47%), Gaps = 34/453 (7%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELI 158
           D    T L++ +C SG+  KA  +   + + G V D   +++L+  + K GE+DKA +++
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           ERM   ++  +  T+  ++       ++ +A+++ D+  +     D   Y ++I   C +
Sbjct: 201 ERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-- 276
             +  A++L  EM+  G  PD    + LI     EG L   +K +      N M L    
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL------NNMPLYGCQ 311

Query: 277 ------NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                 N I+R + S G    A  LL  M++               KG  SP+  +F+I+
Sbjct: 312 PNVITHNIILRSMCSTGRWMDAERLLADMLR---------------KG-CSPSVVTFNIL 355

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN L +   L  A+ +  +M + GCM N   YN L+ G C   +++ + E L  M   G 
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N++   LC+      A+ ++ ++  +G  P +     +I  L K GK   A  
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M ++G  PDI+ YS  + GL    +VD A+++F D+      P  V YN I+ GLC
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           KAQ+ + A D    M+ KG  P+ ATY +LI G
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 171/339 (50%), Gaps = 4/339 (1%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I +  L+++G+L+  L     M   G + +V    +LI G C S +  ++  ++  +E 
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           SG  P   T N +    C+  ++  AL ++ +M V      V +NT+L + LC  GK  E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA--PDVVTYNTIL-RSLCDSGKLKE 227

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L   +Q    PD++ Y+  I    +   V  A++L  ++   GC PDVV YN++I+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G+CK  R+ EA    N M   G  P+V T+N+++   C +G    A   L+ ML K   S
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK-GCS 346

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P V+T+  LI+ LC       AI +  +M + GC PN +++  L+ G C+  +   A+ +
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +M  +G  PD+  +  L++A   +     A E+L ++
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQL 445



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 4/273 (1%)

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            F  N   R L R  ++   L  + +M  QG  P V   T LI+  C+ GK  +A R + 
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +   G +PD++ Y+  IGG      +D AL++   +      PDVV YN I+  LC + 
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSG 223

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ EA ++ +  + +   P V TY +LI   C    + QAM  L  M  K+   PDV+TY
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM-RKKGCKPDVVTY 282

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             LI+G+C  GR D+AI   N M   GC PN IT   ++  +C   R   A      M  
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           KG  P +  F  LI+    +     A +VL++M
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 140/307 (45%), Gaps = 4/307 (1%)

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F  N  +  L  +  LEE  + L  M   G  P      S+ R  CR      A  ++  
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +   G  P V    +LI   CK G+  +A + L  M      PD+V Y+  +  L D  +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A+E+        C PDV+ Y I+I   C    V +A  L +EM  KG  P V TYN+
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LING CK G +D+A+  L+ M       P+VIT+  ++  +C  GR  DA  L  +M  K
Sbjct: 285 LINGICKEGRLDEAIKFLNNM-PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           GC+P+ +TF  LI  LC+      A+     M + G  P+   +  L+  F  E     A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403

Query: 660 FEVLKEM 666
            E L+ M
Sbjct: 404 IEYLEIM 410



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 175/381 (45%), Gaps = 24/381 (6%)

Query: 22  VKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFD-QVKREGLCVPNNYSYNCLLEALCK 78
           V  R  ++P  + +  ++R L   G ++EA  + D Q++RE  C P+  +Y  L+EA C 
Sbjct: 199 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCN 256

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
              V      L EM+  G   D  T   L+   C  G+ D+A+   N +  +G     + 
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            +I+L +    G    A  L+  M       +  TF +LI+   +K  + +A+ + +KM 
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G   ++  Y+ ++ G C+ K+++ A++    M   G  PD    + L+T+   +G+  
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436

Query: 258 LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             V+ + +   +  + + +  N+++  L   G  + A  LL+ M +              
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRR-------------- 482

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG + P+  ++  ++  L  +GK+D A+ +F +M  +    +   YN ++ GLC + + 
Sbjct: 483 -KG-LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 540

Query: 376 EESYELLREMEESGFKPTHFT 396
             + + L  M E G KPT  T
Sbjct: 541 SRAIDFLAYMVEKGCKPTKAT 561



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+ S  R +   R+LA D+++  C  S      LI  L    L+  A  + +++ + G
Sbjct: 321 LRSMCSTGRWMDAERLLA-DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C+PN+ SYN LL   C+   +D     L+ M   G   D  T   LL   C  G+ D A
Sbjct: 380 -CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAA 438

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           + + N++   G     + ++ ++   +K G+ + A EL+E M    ++ +  T+  L+ G
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              + +VD+A+++F  M        A  Y+ I+ GLCK +Q   A+   + M   G  P 
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 558

Query: 240 FEILSKLITSCSD 252
               + LI   +D
Sbjct: 559 KATYTILIEGIAD 571



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 88/193 (45%), Gaps = 2/193 (1%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V   C+        L+  L   G  + A  + +Q+  +G C P   +YN +++ L K  
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG-CSPVLITYNTVIDGLTKVG 468

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
             +     L+EM+  G   D  T + LL+     G+ D+A+ +F+++         V ++
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYN 528

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            +++   K  +  +A + +  M +   +  + T+ +LI G   +   ++AL+L +++   
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSR 588

Query: 200 GFASDAAMYDVII 212
           GF   ++   V +
Sbjct: 589 GFVKKSSAEQVAV 601


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 171/651 (26%), Positives = 296/651 (45%), Gaps = 31/651 (4%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +    G LIR   S G ++ A  L +++K  G    N   +  L++ LC +  V   
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGF-EGNAVVHTTLMKGLCDAGRVVEA 63

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
               + M       D  T T L+   C +G+FD+A  +  E+I  G   + V FS L+  
Sbjct: 64  LEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK-SRVDKALQLFDKMTKSGFAS 203
             K+G  ++A  ++E +    +  ++  F  +I     K + V+ A ++   +   GF  
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLL 259
              M++++I G CK K L+ A +L   M   G  P+    + LIT       +     LL
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
            K +      N +T   ++++  L   G +D AY L Q M                 +  
Sbjct: 243 EKMVTGGCSPNVVTY--STVINGLCKQGQVDDAYELFQLM----------------ERRN 284

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN  + +I+I+ L K  +++ A  L+  M + GC  ++  YN+LIDGLC S +++E++
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344

Query: 380 ELLREMEESGFKPTH-FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           +L + + ESG    +  T +++F        +  A  +   +  +G  P +   T LI E
Sbjct: 345 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK  +A+E    + +M  +GF P +   SA +GGL +    + A++LF  + A GC  D
Sbjct: 405 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 464

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITK---GLIPSVATYNLLINGWCKSGNIDQAML 555
            + YN+++ G+ +A +  +A  +  ++I K      PS +  + L+   C+ G  D A  
Sbjct: 465 ALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQ 524

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L +M E+   +  V +Y  L+ GL    R D+A  ++  M   G AP   T   +I+ L
Sbjct: 525 LLHKMSERGFAAA-VSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWL 583

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           C   +   A    + M + G  PD+     LI  +       LA ++L+EM
Sbjct: 584 CSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 634



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/614 (24%), Positives = 282/614 (45%), Gaps = 26/614 (4%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +C+PN ++Y  L+     +  +D+    L+EM+  G+  +    T L++  C++G+  +A
Sbjct: 4   ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEA 63

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           L  F  +      D   ++ L+ A  K G+ D+A  ++  M       +  TF  LI G 
Sbjct: 64  LEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC-KNKQLEMALQLYSEMKGSGITPD 239
            K    ++A ++ + + + G  +  A ++ II  LC K   +E+A ++   +   G TP 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LL 296
             + +             L++    + +D+++   L    + +++  G +   +    L+
Sbjct: 184 VLMFN-------------LVINGFCKAKDLDSAYKL----LEVMIEKGCVPNVFTFTILI 226

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             + K   + +    +  +  G  SPN  ++  +IN L K G++D A  LF+ M +  C 
Sbjct: 227 TGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCP 286

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  +N LIDGLC + R+EE+ +L   M E+G  P   T NS+   LC+   V  A  L
Sbjct: 287 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346

Query: 417 VRKMRVQGHEPW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            + +   G      V ++TL        G+  +A R  + +V +GF PD+  Y++ I   
Sbjct: 347 FQTIPESGVSAANAVTYSTLF-HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R    +EL  ++ + G  P V   + ++ GL +      A  LF+ M  +G     
Sbjct: 406 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 465

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESG--SPDVITYTTLIDGLCIAGRPDDAIML 592
             YNL++ G  ++   ++A+  L ++++K     +P       L++ LC  GR DDA  L
Sbjct: 466 LIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQL 525

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            ++M E+G A    ++  L++GL +  R   A   F  M   G  P++     +IS   S
Sbjct: 526 LHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCS 585

Query: 653 ELNPPLAFEVLKEM 666
                 A+E+++ M
Sbjct: 586 AAKVDDAYELVQRM 599



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 160/618 (25%), Positives = 264/618 (42%), Gaps = 68/618 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L++ L   G V EA   F  + ++  C P+  +Y  L+ ALCK+   D  +  L+EM   
Sbjct: 50  LMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMIAR 107

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH------------------- 136
           G   D  T + L+   C  G  ++A  V  ++I  G  +                     
Sbjct: 108 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 167

Query: 137 ------------------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                             +F++++  F K  ++D A +L+E M +     N  TF +LI 
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  K +RV +A QL +KM   G + +   Y  +I GLCK  Q++ A +L+  M+     P
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287

Query: 239 DFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           +    + LI          +  +L   ++E     D+ T     NS++  L  +  +D+A
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY----NSLIDGLCKSFQVDEA 343

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L Q + +                G  + N  ++  + +     G++  A  +F  +  
Sbjct: 344 FQLFQTIPE---------------SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVD 388

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++  Y +LI   C ++R  E  EL+ EM   GF P   TL+++   L        
Sbjct: 389 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 448

Query: 413 ALNLVRKMRVQG-HEPWVKHNTLL--IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           A+ L   M  +G  +  + +N ++  +    KH KA+     + D     F P      A
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDA 508

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  L  + R D A +L   +   G    V +YN ++SGL + QR  EA  +F  M++ G
Sbjct: 509 LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAG 568

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P ++T N++I+  C +  +D A   + RM  K    PD+ T  TLI G C +GR D A
Sbjct: 569 PAPEISTVNVVISWLCSAAKVDDAYELVQRM-SKLGCCPDIETCNTLIGGYCKSGRADLA 627

Query: 590 IMLWNEMEEKGCAPNRIT 607
             L  EM E G  PN  T
Sbjct: 628 RKLLEEMTEAGLEPNDTT 645



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 245/543 (45%), Gaps = 42/543 (7%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLI-RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
            RVL +DV++     S  A   +I R       VE A+ +   V  +G   P    +N +
Sbjct: 133 FRVL-EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF-TPTVLMFNLV 190

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           +   CK+  +D     L+ M + G   + +T T L+   C + +  +A  +  +++  G 
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGC 250

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V +S ++    K G+VD A EL + M+  N   N  T  +LI G  K  R+++A Q
Sbjct: 251 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQ 310

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-----------DF 240
           L+ +M ++G A D   Y+ +I GLCK+ Q++ A QL+  +  SG++             +
Sbjct: 311 LYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 370

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             L ++  +C      ++LV + +   D+ T T L   I+    ++ +++    + +   
Sbjct: 371 AALGRMADACRI---FSMLVDKGFSP-DLATYTSL---ILEYCKTSRAVEVVELVEEMAS 423

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           KG P                 P  ++   ++  L +    + A+ LF  M   GC  +  
Sbjct: 424 KGFP-----------------PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 466

Query: 361 LYNNLIDGLCNSNRLEESYELLREM---EESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +YN +++G+  +++  ++  +L ++    +  F P+   ++++   LC+      A  L+
Sbjct: 467 IYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLL 526

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM  +G    V     L+  L +  +  EA +    MV  G  P+I   +  I  L   
Sbjct: 527 HKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSA 586

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +VD A EL + +   GCCPD+   N +I G CK+ R   A  L  EM   GL P+  T+
Sbjct: 587 AKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 646

Query: 538 NLL 540
           +LL
Sbjct: 647 DLL 649



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 31/420 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L +A R+   + L + +V   C  SP  + +  +I  L   G V++A  LF  ++R   C
Sbjct: 229 LCKANRVGEAQQLLEKMVTGGC--SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN-C 285

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  ++N L++ LCK+  ++        M++ G   D  T   L+   C S Q D+A  
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345

Query: 123 VFNEIIDHG--WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +F  I + G    +   +S L   ++  G +  AC +   + D     +  T+  LI  +
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD- 239
            K SR  + ++L ++M   GF         ++GGL +    E A+QL+  M   G T D 
Sbjct: 406 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 465

Query: 240 --FEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNL 295
             + ++ + +   S   +   +++++ + RD   N  +   ++++  L   G  D A  L
Sbjct: 466 LIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQL 525

Query: 296 LQAMIKGEPIADVGV---------------EMLMIFKGTVS----PNTSSFDIIINTLLK 336
           L  M +    A V                 E   +F+  VS    P  S+ +++I+ L  
Sbjct: 526 LHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCS 585

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             K+D A  L + M+++GC  ++   N LI G C S R + + +LL EM E+G +P   T
Sbjct: 586 AAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 645


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 167/591 (28%), Positives = 267/591 (45%), Gaps = 35/591 (5%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  +FD++ R G    + Y  N  L  + +      V  R   M   G G     +TP
Sbjct: 32  EDARHVFDELLRRGRGA-SIYGLNRALADVARHSPAAAVS-RYNRMARAGAG----KVTP 85

Query: 107 LLQVY-------CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
            +  Y       C +G+ D   +    ++  G+ V+   F+ LL           A +++
Sbjct: 86  TVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145

Query: 159 -ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK---SGFASDAAMYDVIIGG 214
             RM + +   +  +  +L+ G   ++R  +AL+L   M      G A D   Y  +I G
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             K    + A   Y EM    I+PD    S +I +         L K    D+ +  +T 
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA---------LCKGQAMDKAMEVLTT 256

Query: 275 LC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N +M   ++  SI   Y   +     +P   +G    M   G V P+  +++ +++ 
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSE-----QPKEAIGFLKKMRSDG-VEPDVVTYNSLMDY 310

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K+G+   A  +F  MT+ G   ++  Y  L+ G      L E + LL  M  +G  P 
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H   N +     +++ V  A+ +  KMR  G  P V     +I  LCK G   +A  +  
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ EG  P+I+ Y++ I  L    + D A EL  ++   G C + + +N II   CK  
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           RV E+E LF+ M+  G+ P+V TY+ LI+G+C +G +D+A   LS M       PD +TY
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV-GMKPDCVTY 549

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
            TLI+G C   R DDA+ L+ EM   G +PN IT+  ++ GL    R  AA
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 265/559 (47%), Gaps = 35/559 (6%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+P+ +S   LL+ LC ++ S + +E+      D G G   D  + T ++  +   G  D
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D     + V +S ++ A  K   +DKA E++  M    +  N  T+  ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYNL 295
           PD      L+   + +G L  +                 ++++ ++V NG       +N+
Sbjct: 334 PDIATYCTLLQGYATKGALVEM-----------------HALLDLMVRNGIHPDHHVFNI 376

Query: 296 LQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  A  K E + +  +    + +  ++PN  ++  +I  L K G +D A+  F +M   G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N+ +Y +LI  LC  ++ +++ EL+ EM + G        NS+    C+   V+ + 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L   M   G +P V   + LI   C  GK  EA + L+ M   G  PD V Y+  I G 
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             + R+D AL LF+++ + G  P+++ YNII+ GL   +R A A++L+  +   G    +
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 535 ATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           +TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR D+A
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGRNDEA 670

Query: 590 IMLWNEMEEKGCAPNRITF 608
             L+      G  PN  T+
Sbjct: 671 KDLFVAFSSNGLVPNYWTY 689



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 231/535 (43%), Gaps = 64/535 (11%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI    +  R+D        + K GF  +A  +  ++ GLC +K+   A+ +    
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 231 MKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR------DVNTMTLLCNSIMR 281
           M      PD    + L+    DE    E   L+  + +DR      DV + T + N   +
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G  D+AY+    M+                   +SP+  ++  II  L K   +D
Sbjct: 209 ----EGDSDKAYSTYHEMLDRR----------------ISPDVVTYSSIIAALCKGQAMD 248

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +   M + G M N   YN+++ G C+S + +E+   L++M   G +P   T NS+ 
Sbjct: 249 KAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+      A  +   M  +G EP +     L++     G  +E    L  MV+ G  
Sbjct: 309 DYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIH 368

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD   ++  I      ++VD A+ +F  +  HG  P+VV Y  +I  LCK+  V +A   
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLY 428

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAM----------LCLS------------- 558
           F +MI +GL P++  Y  LI+  C     D+A           +CL+             
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488

Query: 559 --RMLEKE---------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
             R++E E            P+VITY+TLIDG C+AG+ D+A  L + M   G  P+ +T
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           +  LI G C+  R   AL  F+ M   G+ P++  +  ++           A E+
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 229/527 (43%), Gaps = 36/527 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN +L   C S         LK+M+  G   D  T   L+   C +G+  +A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   D   +  LL  ++  G + +   L++ M    I  +   F +LI  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   +   Y  +IG LCK+  ++ A+  + +M   G+TP+  
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 443 VYTSLIHS--------LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          PN  ++  +I+     GK+D A  L   M 
Sbjct: 495 SEKLFDLMVR------IGVK----------PNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R++++  L +EM  SG  P   T N + + L   +   
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF    ++G  P+   Y ++   +     + E + LF  M   G  
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCT 718

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
                 N ++    + G I +A   LS M++++  S +  T +  ID
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLS-MIDEKHFSLEASTASLFID 764



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 7/278 (2%)

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE--PWVKHNT 433
           E++  +  E+   G   + + LN     + R           R  R    +  P V    
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL-FRDICA 492
           +LI   C+ G+    F  L ++V++GF  + + ++  + GL   KR   A+++  R +  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK---GLIPSVATYNLLINGWCKSGN 549
             C PDV +  I++ GLC   R  EA +L + M      G  P V +Y  +ING+ K G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
            D+A      ML++   SPDV+TY+++I  LC     D A+ +   M + G  PN +T+ 
Sbjct: 212 SDKAYSTYHEMLDRRI-SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +++ G C  ++P+ A+   + M+  G++PD+  + +L+
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 41/317 (12%)

Query: 343 ALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           A+S +  M + G  +    V  Y  LI   C + RL+  +  L  + + GF+    T   
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + + LC  +    A+++V                                  L  M +  
Sbjct: 128 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELS 153

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +PD+   +  + GL D  R   ALEL     D    G  PDVV+Y  +I+G  K     
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A   ++EM+ + + P V TY+ +I   CK   +D+AM  L+ M+ K    P+ +TY ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV-KNGVMPNCMTYNSI 272

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C + +P +AI    +M   G  P+ +T+ +L+  LCK  R   A   F  M ++G+
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 637 KPDMFVFVALISAFLSE 653
           +PD+  +  L+  + ++
Sbjct: 333 EPDIATYCTLLQGYATK 349



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 187/435 (42%), Gaps = 55/435 (12%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G +I  L   G V++A + F+Q+  EGL  PN   Y  L+ +LC     D  E  + EM 
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHSLCIFDKWDKAEELILEML 468

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEV 151
           D G   +      ++  +C  G+  ++  +F+ ++  G V  +V  +S L+  +   G++
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG-VKPNVITYSTLIDGYCLAGKM 527

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A +L+  M    ++ +  T+  LI+G+ + SR+D AL LF +M  SG + +   Y++I
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           + GL   ++   A +LY  +  SG   +                                
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTY---------------------------- 619

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                N I+  L  N   D+A  + Q +     + D+ +E            T +F+I+I
Sbjct: 620 -----NIILHGLCKNNLTDEALRMFQNLC----LTDLQLE------------TRTFNIMI 658

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             LLK G+ D A  LF   +  G + N + Y  + + +     LEE  +L   ME++G  
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCT 718

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                LN + R L +R ++  A   +  M  + H         L  +L   GK  E  RF
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQEYHRF 777

Query: 452 LTDMVQEGFLPDIVC 466
           L +  +  F+  + C
Sbjct: 778 LPEKYKS-FIESLSC 791



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P +  Y   IG      R+DL      ++  
Sbjct: 57  LADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVK 115

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G   + + +  ++ GLC  +R ++A D+    M     +P V +  +L+ G C      
Sbjct: 116 KGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQ 175

Query: 552 QAMLCLSRMLEKESG--SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +A+  L  M +   G  +PDV++YTT+I+G    G  D A   ++EM ++  +P+ +T+ 
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 310/696 (44%), Gaps = 96/696 (13%)

Query: 29   SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
            +P  + F  L+  L   G ++EA  L D ++++G+ +PN ++YN L+  L +   +D   
Sbjct: 366  APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGV-LPNLHTYNTLISGLLRVNRLDDAL 424

Query: 87   MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS------------------------ 122
                 M+  G     YT    +  Y  SG+ DKAL                         
Sbjct: 425  DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484

Query: 123  -----------VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
                       +FN +  +G   + V +++++  +SK G+VD+A EL+  M +     + 
Sbjct: 485  AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 171  KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
                 LI+   K  RVD+A ++F ++     A     Y+ +I GL K  Q++ A++L++ 
Sbjct: 545  IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 231  MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGS 288
            M G+G  P+    + ++       E+ L +K +++   +N M   L  N+I+  LV    
Sbjct: 605  MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 289  IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            +  A  L   M                 K  ++P+  +   ++  ++K+G ++ A  +  
Sbjct: 665  VSDAIWLFHQM-----------------KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707

Query: 349  E---------------------MTQIGCMQNVFLYNNLIDG---------------LCNS 372
            +                     +TQ G  + +   + L+ G               LC  
Sbjct: 708  DFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKH 767

Query: 373  NR-LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             + L      +R  +E G KPT  + N +        +   A NL  +M+  G  P V  
Sbjct: 768  KQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827

Query: 432  NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LL+    K GK  E F     M+     P+ + ++  I  L+    +D AL+LF D+ 
Sbjct: 828  YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV 887

Query: 492  AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +    P    Y  ++ GL K+ R+ EA++LF EM+  G  P+ A YN+LING+ K+G+++
Sbjct: 888  SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVN 947

Query: 552  QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             A     RM+ +E   PD+ +YT+L+  LC AGR DDA+  + ++++ G   + I +  +
Sbjct: 948  TACELFKRMV-REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006

Query: 612  ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            I GL +  R   AL  +  M+ +G+ PD+F + +LI
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 256/535 (47%), Gaps = 31/535 (5%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWG 149
           +M++ G+  + Y+   L+ +   SG   +AL ++  ++  G       FS L+VA  K  
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           + +    L+E M+   ++ N  T+ + I    +  R+D+A ++  +M   G   D   Y 
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-- 267
           V+I  LC   +L+ A++L+ +MK S   PD      ++   SD G+L   VKE W +   
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR-VKEFWSEMEA 362

Query: 268 -----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                DV T T+L N+    L   G+ID+A++LL  M                 K  V P
Sbjct: 363 DGYAPDVITFTILVNA----LCKAGNIDEAFHLLDVM----------------RKQGVLP 402

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  +++ +I+ LL+  +LD AL LF  M  +G +   + Y   ID    S R +++ E  
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETF 462

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M+  G  P     N+    L     +  A  +  +++  G  P      +++K   K 
Sbjct: 463 EKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKA 522

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  EA   L+DM +    PDI+  ++ I  L    RVD A ++F  +      P VV Y
Sbjct: 523 GQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTY 582

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I+GL K  +V  A +LF  M   G  P+  T+N +++  CK+  +D A+  L +M  
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTT 642

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
                PDV+T+ T+I GL I  R  DAI L+++M +K   P+ +T   L+ G+ K
Sbjct: 643 MNC-MPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVK 695



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 280/632 (44%), Gaps = 29/632 (4%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L  +G + EA ++F+++K  GL  P++ +YN +++   K+  VD     L +M +     
Sbjct: 484  LAEMGRLREAKVIFNRLKSNGLA-PDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEP 542

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     +G+ D+A  +F  + D       V ++ L+    K G+V +A EL 
Sbjct: 543  DIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF 602

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
              M       N  TF  ++    K   VD AL++  KMT      D   ++ II GL   
Sbjct: 603  ASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--------------ELTLLV-KEI 263
            K++  A+ L+ +MK   +TPD   L  L+      G               L + V +  
Sbjct: 663  KRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRF 721

Query: 264  WEDRDVNTMTLLCNSIMRILVSN----GSIDQAYNLLQAMIK---GEPIADVGVEMLMIF 316
            WED     +T    +   IL  +    G + +  ++L  +IK       A V   + + F
Sbjct: 722  WEDLMGGILTQ-AGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRF 780

Query: 317  KGT--VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                 V P   S++ +I   L     ++A +LF EM   GC  +VF YN L+D    S +
Sbjct: 781  TKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGK 840

Query: 375  LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            + E +EL  +M  S  KP   T N +   L +   +  AL+L   +      P       
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 435  LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            L+  L K G+  EA     +MV  G  P+   Y+  I G      V+ A ELF+ +   G
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 495  CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              PD+ +Y  ++  LC+A RV +A   F ++   GL      YNL+I+G  +S  I++A 
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA- 1019

Query: 555  LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            L L   ++    +PD+ TY +LI  L +AG  + A  L+ E++  G  PN  T+ ALI G
Sbjct: 1020 LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079

Query: 615  LCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
                    +A   ++ M   G  P+   F  L
Sbjct: 1080 YSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 171/673 (25%), Positives = 290/673 (43%), Gaps = 65/673 (9%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G ++EA  +  +++ +G C P+  +Y  L++ALC +  +D       +M+   
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDG-CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKAC 155
              D+ T   +L  + + G   +    ++E+   G+  D   F+IL+ A  K G +D+A 
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L++ M    +  N  T+  LI G ++ +R+D AL LF+ M   G    A  Y + I   
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--- 272
            K+ + + AL+ + +MK  GI P+    +  + S ++ G L    K I+     N +   
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLRE-AKVIFNRLKSNGLAPD 508

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           ++  N +M+     G +D+A  LL  M + +                  P+    + +IN
Sbjct: 509 SVTYNMMMKCYSKAGQVDEAIELLSDMSENQ----------------CEPDIIVINSLIN 552

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           TL K G++D A  +F  +  +     V  YN LI GL    +++ + EL   M  +G  P
Sbjct: 553 TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPP 612

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP----------------------WVK 430
              T N++  CLC+  +V  AL ++ KM      P                      W+ 
Sbjct: 613 NTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF 672

Query: 431 HNT------------LLIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDI 477
           H               L+  + K+G   +AF+   D V   G   D   +   +GG++  
Sbjct: 673 HQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQ 732

Query: 478 KRVDLALELFRD--ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSV 534
              +  + LF D  +C    C D      II  LCK ++   A+ +F     + G+ P++
Sbjct: 733 AGTEKTI-LFGDRLVCGR-VCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTL 790

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLW 593
            +YN LI G+    N + A    + M  K +G +PDV TY  L+D    +G+ ++   L+
Sbjct: 791 ESYNFLIEGFLGVHNDEMAWNLFTEM--KNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            +M    C PN IT   +I  L K +    AL  F  +      P    +  L+   L  
Sbjct: 849 EQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKS 908

Query: 654 LNPPLAFEVLKEM 666
                A E+ +EM
Sbjct: 909 GRLEEAKELFEEM 921



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 249/588 (42%), Gaps = 95/588 (16%)

Query: 120 ALSVFNEIIDHGWVDE------HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           A S FN + +  +V        H+  IL +       V     +   M +  I+ +  T+
Sbjct: 107 AFSYFNSVAEMPFVVHTTETCNHMLEILRI----HRRVGDMVVVFNLMQNQIIKRDLNTY 162

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
            ++  G   +  + +    F KM ++GF  +A  Y+ +I  L ++     AL++Y  M  
Sbjct: 163 LIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVL 222

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            G+ P  +  S L+ +                 RD  T+  L                  
Sbjct: 223 EGLKPSLKTFSALMVATGKR-------------RDTETVKSLL----------------- 252

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
                    E +  +G++          PN  ++ I I  L + G++D A  + + M   
Sbjct: 253 ---------EEMESLGLK----------PNIYTYTICIRVLGRAGRIDEACRIMKRMEDD 293

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC  +V  Y  LID LC + +L+++ EL  +M+ S  KP   T  +M        D+   
Sbjct: 294 GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRV 353

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
                +M   G+ P V   T+L+  LCK G   EAF  L  M ++G LP++  Y+  I G
Sbjct: 354 KEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISG 413

Query: 474 LIDIKRVDLALELFRDICA-----------------------------------HGCCPD 498
           L+ + R+D AL+LF ++                                      G  P+
Sbjct: 414 LLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +VA N  +  L +  R+ EA+ +FN + + GL P   TYN+++  + K+G +D+A+  LS
Sbjct: 474 IVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLS 533

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M E +   PD+I   +LI+ L  AGR D+A  ++  +++   AP  +T+  LI GL K 
Sbjct: 534 DMSENQC-EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + + A+  F  M   G  P+   F  ++          LA ++L +M
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 161/669 (24%), Positives = 278/669 (41%), Gaps = 90/669 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   GL  EA  ++ ++  EGL  P+  +++ L+ A  K    + V+  L+EM+  
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGL-KPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   + YT T  ++V   +G+ D+A  +   + D G   D   +++L+ A    G++D A
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  +M   + + +  T+  ++  F     + +  + + +M   G+A D   + +++  
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK   ++ A  L   M+  G+ P+    + LI+                          
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS-------------------------- 412

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
               ++R+      +D A +L   M           E L      V P   ++ + I+  
Sbjct: 413 ---GLLRV----NRLDDALDLFNNM-----------ETL-----GVVPTAYTYILFIDFY 449

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+ D AL  F +M   G   N+   N  +  L    RL E+  +   ++ +G  P  
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N M +C  +   V  A+ L+  M     EP +     LI  L K G+  EA++    
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCR 569

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +      P +V Y+  I GL    +V  A+ELF  +  +GC P+ + +N I+  LCK   
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDE 629

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V  A  +  +M T   +P V T+N +I+G      +  A+    +M  K+  +PD +T  
Sbjct: 630 VDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM--KKMLTPDCVTLC 687

Query: 575 TLIDGLCIAGRPDDAIML----------------WNEM----------EEKGCAPNRI-- 606
           TL+ G+   G  +DA  +                W ++          E+     +R+  
Sbjct: 688 TLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVC 747

Query: 607 --------TFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
                     M +I  LCK  +   A  V  R  KE G+KP +  +  LI  FL   N  
Sbjct: 748 GRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDE 807

Query: 658 LAFEVLKEM 666
           +A+ +  EM
Sbjct: 808 MAWNLFTEM 816



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 249/549 (45%), Gaps = 30/549 (5%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI  LG  G V+ A  LF  +   G C PN  ++N +L+ LCK+  VDL    L +M   
Sbjct: 585  LIAGLGKEGQVQRAMELFASMTGNG-CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM 643

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
                D  T   ++       +   A+ +F+++      D      LL    K G ++ A 
Sbjct: 644  NCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAF 703

Query: 156  ELIER-MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++ E  +    + ++ + +  L+ G + ++  +K +   D++       D ++   II  
Sbjct: 704  KIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKV 763

Query: 215  LCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITSC----SDEGELTLL--VKEIWEDR 267
            LCK+KQ  +A  ++    K  G+ P  E  + LI       +DE    L   +K      
Sbjct: 764  LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823

Query: 268  DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            DV T  LL ++  +    +G I++ + L + MI                  +  PNT + 
Sbjct: 824  DVFTYNLLLDAHGK----SGKINELFELYEQMICS----------------SCKPNTITH 863

Query: 328  DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            +III  L+K   LD AL LF ++           Y  L+DGL  S RLEE+ EL  EM +
Sbjct: 864  NIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD 923

Query: 388  SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
             G +P +   N +     +  DV  A  L ++M  +G  P +K  T L+  LC+ G+  +
Sbjct: 924  YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDD 983

Query: 448  AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            A  +   + Q G   D + Y+  I GL    R++ AL L+ ++ + G  PD+  YN +I 
Sbjct: 984  ALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043

Query: 508  GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
             L  A  V +A  L+ E+   GL P+V TYN LI G+  SGN D A     RM+     S
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVG-GCS 1102

Query: 568  PDVITYTTL 576
            P+  T+  L
Sbjct: 1103 PNTGTFAQL 1111


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 248/515 (48%), Gaps = 30/515 (5%)

Query: 115 GQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G    + S+F +I+  G+ +D    + +L      G V KA E  + + +    LNE ++
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTK------SGF--ASDAAMYDVIIGGLCKNKQLEMAL 225
            +LI+G  +  RV++A+ L   + K       GF    +  MY ++I  LC+N  ++   
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRI 282
           + Y+EM G+G+ P+      LI      G+      LV E+   R ++    +   ++  
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR-RGLDVSVYVFTVLIDG 264

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  NG + +A  +   M+      + G E          PN  +   ++      G +D+
Sbjct: 265 LCKNGMLVEAREMFDEMV------NRGYE----------PNIVTCTALMGGYCLKGNVDM 308

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LF  + + G  ++V+ YN  I G C   R+ ++  +  EM   G  P   T NS+  
Sbjct: 309 ARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLID 368

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           CLC+  +V GA  +V+ M   G  P +    +L+  LCK  +  +A      +V+ G  P
Sbjct: 369 CLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP 428

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+  Y+  I G    +R+  A+ L RD+      P +V Y+ +I GLC++ R++ A  L 
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           NEM  KG +P   TY++L++   K  ++D+A+   ++M+ K    PDV+ YT +IDG C 
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI-KRGLEPDVMCYTIMIDGYCK 547

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           + R D+AI L+ EM  K   P+ +T+  L   + K
Sbjct: 548 SERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 237/497 (47%), Gaps = 27/497 (5%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F     V  +  +F K+ K G+  D    + ++ GLC N  +  AL+ + E+  +G + +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 240 FEILSKLITSCSDEGE-------LTLLVKEIWEDRD---VNTMTLLCNSIMRILVSNGSI 289
                 LI    + G        L ++ KE  +++D   V    ++ + ++  L  NG +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D+ +     M+                   V PN  ++  +I  L   GK      L  E
Sbjct: 202 DEGFEFYNEMMGN----------------GVCPNEFTYGSLIRGLCGVGKFLEGFGLVDE 245

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G   +V+++  LIDGLC +  L E+ E+  EM   G++P   T  ++    C + +
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A  L   +   G +  V    + I   CK G+  +A R   +M +EG +P+IV Y++
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I  L     V  A E+ + +   G  PD+V   I++ GLCK++R+ +A  LFN+++  G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P V +Y +LI+G C S  + +AM  L R +  ++  P ++TY+ LIDGLC +GR  +A
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLL-RDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 484

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L NEM  KG  P+ IT+  L+  L K      A+  F  M ++G++PD+  +  +I  
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 544

Query: 650 FLSELNPPLAFEVLKEM 666
           +        A  + +EM
Sbjct: 545 YCKSERIDEAINLFREM 561



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 248/526 (47%), Gaps = 36/526 (6%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           C   +G V  +  +F ++ + G  + +  + N +L+ LC +  V        E+ + G+ 
Sbjct: 81  CFFHLGHVSFSFSIFGKILKRGYGL-DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFS 139

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEII-------DHGWVDEHV--FSILLVAFSKWG 149
            ++ +   L+   C +G+ ++A+++   I        D  +V  +V  +SI++    + G
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VD+  E    M    +  NE T+  LI G     +  +   L D+M + G      ++ 
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEI 263
           V+I GLCKN  L  A +++ EM   G  P+    + L+     +G      EL   + E 
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              RDV T  +  +   ++    G +  A  +   M +               +G V PN
Sbjct: 320 GFKRDVWTYNVFIHGYCKV----GRVRDAVRVFDEMCR---------------EGVV-PN 359

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++ +I+ L K G++  A  + + M + G   ++     L+DGLC S RL+++  L  
Sbjct: 360 IVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 419

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           ++ ESG  P  ++   +    C  + +  A+NL+R M ++   P +   + LI  LC+ G
Sbjct: 420 QLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSG 479

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A+R L +M  +G LPD + YS  +  L   + +D A+ LF  +   G  PDV+ Y 
Sbjct: 480 RISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYT 539

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           I+I G CK++R+ EA +LF EM  K L+P + TY +L N   KSG+
Sbjct: 540 IMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 200/440 (45%), Gaps = 22/440 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I CL   G V+E    ++++   G+C PN ++Y  L+  LC           + EM   
Sbjct: 191 VIDCLCRNGFVDEGFEFYNEMMGNGVC-PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR 249

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKA 154
           G     Y  T L+   C +G   +A  +F+E+++ G+    V  + L+  +   G VD A
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA 309

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + + +   + +  T+ V IHG+ K  RV  A+++FD+M + G   +   Y+ +I  
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK  ++  A ++   M  SG+TPD      ++T C       +L+  + + + ++   L
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPD------IVTCC-------ILLDGLCKSKRLDQAIL 416

Query: 275 LCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           L N     LV +G     ++   L+        + +    +  +    + P+  ++  +I
Sbjct: 417 LFNQ----LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 472

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L + G++  A  L  EM   G + +   Y+ L+D L     L+E+  L  +M + G +
Sbjct: 473 DGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLE 532

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P       M    C+ + +  A+NL R+M ++   P +   T+L   + K G     ++F
Sbjct: 533 PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKF 592

Query: 452 LTDMVQEGFLPDIVCYSAAI 471
           +  +      P ++ Y AA+
Sbjct: 593 VNVIRDINPPPRVLKYLAAL 612


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 1080

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 304/644 (47%), Gaps = 36/644 (5%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L  L KS  + + +    E++ 
Sbjct: 410  LFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 468

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    + +FD+A+ +F ++I++  V D    + L+    K G  D+
Sbjct: 469  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A  +  ++ + N+   + T+  L+ G  ++ +V + + L ++M  S +  +   Y+ I+ 
Sbjct: 529  AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 588

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-----D 268
             LCKN  +  AL +   M   G  PD    + +I     E           + +     D
Sbjct: 589  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 648

Query: 269  VNTMTLLCNSIMRI--------------LVSNGSIDQA--YNLLQAMIKGEPIADVGVEM 312
              T+  +  S ++I              L      D++  ++L++ ++K       G+E 
Sbjct: 649  YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK-----KAGIEK 703

Query: 313  LMIFKGTVSPNTSSFD-----IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
             + F   ++ +  + D      +I  L K  K   A  L ++    G      LYN+LI 
Sbjct: 704  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 763

Query: 368  GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            GL + N ++ +  L  EM+E G  P  FT N +   + +   +   L +  +M  +G+E 
Sbjct: 764  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 823

Query: 428  -WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
             +V +NT +I  L K  +  +A     +++ +GF P    Y   + GL+   R++ A  L
Sbjct: 824  TYVTYNT-IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 882

Query: 487  FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            F ++  +GC  +   YNI+++G   A    +   LF +M+ +G+ P + +Y ++I+  CK
Sbjct: 883  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 942

Query: 547  SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            +G ++  +    ++LE     PD+ITY  LIDGL  + R ++A+ L+NEM++KG  PN  
Sbjct: 943  AGQLNDGLTYFRQLLEM-GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1001

Query: 607  TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            T+ +LI  L K  +   A   +  +  KG KP++F + ALI  +
Sbjct: 1002 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1045



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 182/724 (25%), Positives = 314/724 (43%), Gaps = 96/724 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+ L   G + +A  +F ++K+     P+  +Y  LL+    +     V      M+  
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 329

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G+  +    T ++   C  G+  +AL +F+E+   G V E + ++ L+  F K      A
Sbjct: 330 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 389

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + MD    + N  T  + I+ + K     KA+Q ++ M   G   D    + ++ G
Sbjct: 390 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 449

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
           L K+ +L MA +++ E+K  G++PD    + +I  CS   +    VK  ++  + N +  
Sbjct: 450 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------IADVGVE---------ML 313
            L  NS++  L   G  D+A+ +   +  +  EP        +A +G E         + 
Sbjct: 510 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 569

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            ++     PN  +++ I++ L K+G ++ AL +   MT  GC+ ++  YN +I GL    
Sbjct: 570 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 629

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------- 423
           R  E++ +  +M++    P + TL ++     +   +  AL++++   +Q          
Sbjct: 630 RYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 688

Query: 424 -----------GHEPWVKHNTL---------------LIKELCKHGKAMEAFRFLTDMVQ 457
                      G E  ++   +               LIK LCK  KA+EA   +     
Sbjct: 689 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 748

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G       Y++ I GL+D   +D+A  LF ++   GC PD   YN+++  + K+ R+ E
Sbjct: 749 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 808

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
              +  EM  KG   +  TYN +I+G  KS  ++QA + L   L  +  SP   TY  L+
Sbjct: 809 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA-IDLYYNLMSQGFSPTPCTYGPLL 867

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPN-----------RI-------------------- 606
           DGL  AGR +DA  L+NEM E GC  N           RI                    
Sbjct: 868 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 927

Query: 607 ----TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
               ++  +I  LCK  +    L +FR + E G++PD+  +  LI           A  +
Sbjct: 928 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 987

Query: 663 LKEM 666
             EM
Sbjct: 988 FNEM 991



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 272/630 (43%), Gaps = 53/630 (8%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K R   +  +  +++  +   G V +   +FD ++R+ +   N  ++  +   L     +
Sbjct: 83  KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGL 141

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSIL 141
               + L  M++ G   + YT   L+     SG   +AL V+  ++  G V     +S+L
Sbjct: 142 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 201

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +VAF K  +V+    L+  M+   ++ N  ++ + I    +  R D+A ++  KM   G 
Sbjct: 202 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 261

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   + V+I  LC   ++  A  ++ +MK S   PD      L+    D G+ +  V 
Sbjct: 262 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD-SQSVM 320

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           EIW                     N      YN                           
Sbjct: 321 EIW---------------------NAMKADGYN--------------------------- 332

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N  ++  +I+ L + G++  AL +F EM Q G +   + YN+LI G   ++R  ++ EL
Sbjct: 333 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 392

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            + M+  G KP  +T         +  + + A+     M+ +G  P V     ++  L K
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+   A R   ++   G  PD + Y+  I       + D A+++F D+  + C PDV+A
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 512

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            N +I  L KA R  EA  +F ++    L P+  TYN L+ G  + G + + M  L  M 
Sbjct: 513 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P++ITY T++D LC  G  +DA+ +   M  KGC P+  ++  +I GL K +R 
Sbjct: 573 HSNY-PPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERY 631

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFL 651
             A   F  MK K + PD      ++ +F+
Sbjct: 632 NEAFSIFCQMK-KVLIPDYATLCTILPSFV 660



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 232/536 (43%), Gaps = 27/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  I LN  T+  L++  VK     +AL+++  M
Sbjct: 127 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 186

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y V++    K + +E  L L  EM+  G+ P+   + I  +++      
Sbjct: 187 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 246

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   ++ ++  +    DV T T+L    +++L   G I  A ++   M K +       
Sbjct: 247 DEAYRILAKMENEGCKPDVITHTVL----IQVLCDAGRISDAKDVFWKMKKSDQ------ 296

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  ++  +++    +G     + ++  M   G   NV  Y  +ID LC
Sbjct: 297 ----------KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 346

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R+ E+ E+  EM++ G  P  ++ NS+     +      AL L + M + G +P   
Sbjct: 347 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            + L I    K G++++A +    M  +G +PD+V  +A + GL    R+ +A  +F ++
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 466

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y ++I    KA +  EA  +F +MI    +P V   N LI+   K+G  
Sbjct: 467 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 526

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A     ++ E     P   TY TL+ GL   G+  + + L  EM      PN IT+  
Sbjct: 527 DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++  LCK      AL     M  KG  PD+  +  +I   + E     AF +  +M
Sbjct: 586 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 224/518 (43%), Gaps = 36/518 (6%)

Query: 36   LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-----LVEMRL 89
            ++ CL   G V +A +ML+    +   C+P+  SYN ++  L K    +       +M+ 
Sbjct: 586  ILDCLCKNGAVNDALDMLYSMTTKG--CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 643

Query: 90   KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSK 147
              + DY       TL  +L  +   G   +AL +  +         D      L+    K
Sbjct: 644  VLIPDYA------TLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               ++K+ E  E +    I L++   C LI    K+ +  +A +L  K    G +    +
Sbjct: 698  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 757

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIW 264
            Y+ +I GL     +++A  L++EMK  G  PD E    L+     +    E  L V+E  
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEM 816

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              +   +  +  N+I+  LV +  ++QA +L   ++                    SP  
Sbjct: 817  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ----------------GFSPTP 860

Query: 325  SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             ++  +++ LLK G+++ A +LF EM + GC  N  +YN L++G   +   E+   L ++
Sbjct: 861  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920

Query: 385  MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
            M + G  P   +   +   LC+   +   L   R++   G EP +    LLI  L K  +
Sbjct: 921  MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980

Query: 445  AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              EA     +M ++G +P++  Y++ I  L    +   A +++ ++   G  P+V  YN 
Sbjct: 981  LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1040

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            +I G   +     A   +  MI  G +P+ +TY  L N
Sbjct: 1041 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 171/654 (26%), Positives = 295/654 (45%), Gaps = 62/654 (9%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           ++ L  DVV   C M+          L   G VEEA  +F +++  G+ VPN +SY  L+
Sbjct: 115 VKSLVPDVVTYTCIMNG---------LCKSGKVEEAKSVFREMEEVGV-VPNRFSYATLI 164

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
           ++L K  +V    +    M   G G+D    T L+     +G  + A  +F  +++   V
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
              V +S L+    K G+V+K   L++ M++ +I  N   +  ++ G+ KK  +++A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             KM +     +  +Y  +I G  K  Q  +AL L+ EMK  G+  +             
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN------------- 331

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                                 + +S +  L  +G +++A  L + M+            
Sbjct: 332 --------------------NFVIDSFVNNLKRSGRMEEADELFKDMMS----------- 360

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
               +G + P+  ++  +++   K GK   A ++ +EMT+     +V  YN LI+GL   
Sbjct: 361 ----RGLL-PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + E S      M + G  P   T N+M    C+  ++  AL L+ +M+  G +P     
Sbjct: 416 GKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITC 474

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +L++ LC  G+  +    L DM+  GF P    + A +      +R D+ L     +  
Sbjct: 475 NILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVG 534

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D+  YN +IS  C+   +  A  +F +M+ KG++  + TYN LI+G+C S ++ +
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A    S+ML  E  SP+V TY  L+ GL  A    +A  L N+M+E+G  PN  T+  L+
Sbjct: 595 AFAVHSQML-TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G  K    +  +  +  M  KG  P    +  LIS F        A E+++EM
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 254/548 (46%), Gaps = 23/548 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC +G+  +A+ +   +   G   + V ++ L+  F K G++  A +L+  +   N
Sbjct: 23  LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N  T+  LI  + K   ++ AL ++D+MT      D   Y  I+ GLCK+ ++E A 
Sbjct: 83  LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAK 142

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            ++ EM+  G+ P+    + LI S   EG +    +++     R +    ++  ++M  L
Sbjct: 143 SVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGL 202

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  + A ++ Q ++                + ++ PN  ++  +I+   K G ++  
Sbjct: 203 FKAGMANNAEDMFQVLL----------------EESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L +EM +     NV +Y++++DG      L E+ +++R+M +    P  F   ++   
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +      AL+L ++M+ +G E         +  L + G+  EA     DM+  G LPD
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y++ + G     +   A  + +++       DVVAYN++I+GL K  +  E+E    
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHT 425

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCI 582
            M   GL P  AT+N +IN +CK GN+  A+  L+ M  K  G  P+ IT   L+  LC 
Sbjct: 426 GMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM--KSYGLKPNSITCNILVQRLCA 483

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG  +  + L N+M   G  P   T  A++    K  R    L     +   G+K D+  
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLST 543

Query: 643 FVALISAF 650
           +  LIS F
Sbjct: 544 YNTLISTF 551



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 226/505 (44%), Gaps = 52/505 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           EH F++L+  + + GE+ +A EL+E M       +  T+  L++GF K   +  A +L  
Sbjct: 18  EH-FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +++      +   Y  +I   CK++ LE AL +Y EM    + PD               
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD--------------- 121

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                            +T  C  IM  L  +G +++A ++ + M       +VGV    
Sbjct: 122 ----------------VVTYTC--IMNGLCKSGKVEEAKSVFREM------EEVGV---- 153

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  S+  +I++L K+G +  A  L   M   G   +V +Y  L+DGL  +  
Sbjct: 154 ------VPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGM 207

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              + ++ + + E    P   T +++    C+  DV     L+++M  +   P V   + 
Sbjct: 208 ANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSS 267

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++    K G   EA   +  MVQ   LP++  Y   I G     +  +AL+LF+++ + G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              +    +  ++ L ++ R+ EA++LF +M+++GL+P    Y  +++G+ K+G    A 
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M EK SG  DV+ Y  LI+GL   G+ +        M + G AP+  TF  +I  
Sbjct: 388 NIAQEMTEKSSGF-DVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINA 445

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPD 639
            CK      AL     MK  G+KP+
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPN 470



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 1/340 (0%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+++I+   ++G++  A+ L   M   G   ++  YN L++G C    L  + +L+ E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
               +P   T  ++    C+ Q +  AL +  +M V+   P V   T ++  LCK GK  
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA     +M + G +P+   Y+  I  L     V  A  L   +   G   DVV Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL KA     AED+F  ++ + L+P+  TY+ LI+G CK G++++  L L  M EK   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI- 258

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+VI Y++++DG    G  ++A+ +  +M ++   PN   +  LI G  K D+   AL 
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F+ MK +G++ + FV  + ++          A E+ K+M
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 172/381 (45%), Gaps = 17/381 (4%)

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG I +A  LL+ M    P                +P+  +++ ++N   K G L  A  
Sbjct: 30  NGEISRAVELLEGMKTEGP----------------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  E++ +    NV  Y  LID  C S  LE++  +  EM      P   T   +   LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A ++ R+M   G  P       LI  L K G   EAF     MV  G   D+V
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+A + GL      + A ++F+ +      P+ V Y+ +I G CK   V + E L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             K + P+V  Y+ +++G+ K G +++AM  + +M+++    P+V  Y TLIDG   A +
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNI-LPNVFVYGTLIDGYFKADQ 312

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A+ L+ EM+ +G   N     + +  L +  R   A   F+ M  +G+ PD   + +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           ++  F        AF + +EM
Sbjct: 373 MMDGFFKAGKESDAFNIAQEM 393



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 136/607 (22%), Positives = 251/607 (41%), Gaps = 82/607 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD- 94
           L+  L   G+   A  +F  +  E L VPN  +Y+ L++  CK   V+  E+ L+EM++ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESL-VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 95  --------YGWGYDKYTLTPLLQV--------------------------YCNSGQFDKA 120
                   Y    D YT   LL                            Y  + Q   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 121 LSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L +F E+   G ++E+ F I   +    + G +++A EL + M    +  +   +  ++ 
Sbjct: 317 LDLFKEMKSRG-LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF K  +   A  +  +MT+     D   Y+V+I GL K  + E +   ++ M+  G+ P
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAP 434

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    + +I +   EG L   +K + E +   +   ++ CN +++ L + G I++  +LL
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M            ++M F     P  ++   +++   K  + D+ L    ++  +G  
Sbjct: 495 NDM------------LVMGF----HPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVK 538

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  YN LI   C    +  +  + ++M   G      T N++    C    +  A  +
Sbjct: 539 LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAV 598

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +G  P V+   +L+  L       EA   +  M + G +P+   Y   + G   
Sbjct: 599 HSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGK 658

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I  +   ++L+ ++   G  P    YN++IS   K +++++A++L  EM  +G+ P+ +T
Sbjct: 659 IGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++LI GW K     +    L R  + E                        A  L+ EM
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAE------------------------AKRLFEEM 754

Query: 597 EEKGCAP 603
            EKG  P
Sbjct: 755 NEKGFIP 761



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 249/572 (43%), Gaps = 51/572 (8%)

Query: 44  GLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           GL+ EA +++   V+R    +PN + Y  L++   K+    +     KEM+  G   + +
Sbjct: 276 GLLNEAMDVMRKMVQRN--ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNF 333

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
            +   +     SG+ ++A  +F +++  G + + V ++ ++  F K G+   A  + + M
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            + +   +   + VLI+G  K  + +        M + G A D+A ++ +I   CK   L
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             AL+L +EMK  G+ P+    + L+      GE+              TM LL + ++ 
Sbjct: 453 GNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE------------KTMDLLNDMLVM 500

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKL 340
                 +  +A  +L A  K    ADV +       G  V  + S+++ +I+T  + G +
Sbjct: 501 GFHPTPTTHKA--VLDASSKSRR-ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMI 557

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  +F++M   G + ++  YN LI G C S+ L++++ +  +M   G  P   T N +
Sbjct: 558 RRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L   + +  A  LV +M+ +G  P      +L+    K G   E  +   +M+ +GF
Sbjct: 618 LGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGF 677

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV----- 515
           +P    Y+  I      K++  A EL +++   G  P+   Y+I+I G  K  +      
Sbjct: 678 VPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNK 737

Query: 516 -------AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
                  AEA+ LF EM  KG IP   T   +     K G    A   L+++ +K+    
Sbjct: 738 SLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK---- 793

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
              T   L+ G+           LW   E KG
Sbjct: 794 ---TVQELLAGV-----------LWESRERKG 811


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 277/646 (42%), Gaps = 97/646 (15%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           S  F S      +++ L  +G V +A  L     R G   P   SYN +L+AL +  S  
Sbjct: 126 SSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFA-PTVLSYNAVLDALLRRSS-- 182

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
                                        N   +D A  VF +++ +G   + + +++++
Sbjct: 183 ----------------------------SNHRDYDDAERVFRDMVRNGVSPNVYTYNVII 214

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
                 G+++K    + +M+   I  N  T+  LI    KK +V +A+ L   M   G A
Sbjct: 215 RGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVA 274

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           ++   Y+ +I GLC   ++    +L  EM+G G+ PD               E+T     
Sbjct: 275 ANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD---------------EVTY---- 315

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                         N+++      G++ Q   LL  M+                KG +SP
Sbjct: 316 --------------NTLVNGFCKEGNLHQGLVLLSEMVG---------------KG-LSP 345

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +IN + K G L  A+ +F +M   G   N   Y  LIDG C    + E+Y++L
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM  SGF P+  T N++    C    V  A+ ++R M  +G  P V   + +I   C+ 
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            +  +AF+   +MV++G LPD V YS+ I GL   +++  A +LFR++   G  PD V Y
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I+  C    +++A  L +EM+ +G +P   TY++LING  K      A   L ++  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 563 KESGSPDVITYTTLID---------------GLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           +ES  PD +TY TLI+               G C+ G  ++A  ++  M ++   PN   
Sbjct: 586 EES-VPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAI 644

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +  +I G  +      A   +  ++           +AL+ A   E
Sbjct: 645 YNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALARE 690



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 180/353 (50%), Gaps = 8/353 (2%)

Query: 321 SPNTSS--FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL-----CNSN 373
           SP +SS  FD+++ +L + G +  AL+L     + G    V  YN ++D L      N  
Sbjct: 127 SPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHR 186

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
             +++  + R+M  +G  P  +T N + R +  + D+   L  +RKM  +G  P V    
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK  K  EA   L  M   G   +++ Y++ I GL    R+    EL  ++   
Sbjct: 247 TLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK 306

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD V YN +++G CK   + +   L +EM+ KGL P+V TY  LIN  CK+GN+ +A
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRA 366

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +    +M       P+  TYTTLIDG C  G  ++A  + +EM   G +P+ +T+ AL+ 
Sbjct: 367 VEIFDQM-RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G C   R + A+   R M E+G+ PD+  +  +I+ F  E     AF++ +EM
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 223/528 (42%), Gaps = 43/528 (8%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA  L   +   G+   N  SYN ++  LC    +  V   ++EM+  G   D+ T  
Sbjct: 258 VKEAMALLRAMAVGGVAA-NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYN 316

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  +C  G   + L + +E++  G     V ++ L+    K G + +A E+ ++M   
Sbjct: 317 TLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVR 376

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +R NE+T+  LI GF +K  +++A ++  +M  SGF+     Y+ ++ G C   +++ A
Sbjct: 377 GLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEA 436

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           + +   M   G+ PD    S +I     E EL     +KE   ++ V   T+  +S+++ 
Sbjct: 437 VGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQG 496

Query: 283 LVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           L     + +A++L + M+ +G P                 P+  ++  +IN    DG+L 
Sbjct: 497 LCLQQKLVEAFDLFREMMRRGLP-----------------PDEVTYTSLINAYCVDGELS 539

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            AL L  EM Q G + +   Y+ LI+GL    R + +  LL ++      P   T N++ 
Sbjct: 540 KALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI 599

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C   +            V+G          L+K  C  G   EA R    M+Q    
Sbjct: 600 EN-CSNNEF---------KSVEG----------LVKGFCMKGLMNEADRVFKTMLQRNHK 639

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+   Y+  I G      V  A  L+ ++         VA   ++  L +     E   L
Sbjct: 640 PNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRL 699

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
              ++    +       +L+    K GN+D  +  L+ M  K+   PD
Sbjct: 700 LQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEM-AKDGLLPD 746



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 206/481 (42%), Gaps = 56/481 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G + E   L ++++ +GL VP+  +YN L+   CK  ++    + L EM   
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGL-VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK 341

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   +  T T L+   C +G   +A+ +F+++   G   +E  ++ L+  F + G +++A
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +++  M       +  T+  L+HG+    RV +A+ +   M + G   D   Y  +I G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNT 271
            C+ ++L  A Q+  EM   G+ PD    S LI     + +L     L +E+   R +  
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR-RGLPP 520

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD------------------VGVEML 313
             +   S++     +G + +A  L   M++   + D                  V   +L
Sbjct: 521 DEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLL 580

Query: 314 M-IFKGTVSPNTSSFDIIINTLLKD-------------------GKLDLALSLFREMTQI 353
           + +F     P+    D+  NTL+++                   G ++ A  +F+ M Q 
Sbjct: 581 LKLFYEESVPD----DVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQR 636

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR--QDVV 411
               N  +YN +I G      + ++Y L  E+E S F      + ++ + L R    D +
Sbjct: 637 NHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDEL 696

Query: 412 GAL--NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             L  N++R  R+       K   +L++   K G        LT+M ++G LPD   +S+
Sbjct: 697 SRLLQNILRSCRLND----AKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752

Query: 470 A 470
           A
Sbjct: 753 A 753


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/555 (29%), Positives = 265/555 (47%), Gaps = 24/555 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    ++ L  A+ K+   DLV    K+M+  G  ++ YTL+ ++  +C   +   A S
Sbjct: 183 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 242

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              +II  G+    + FS L+      G V +A EL++RM +   + +  T   L++G  
Sbjct: 243 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 302

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              +  +A+ L DKM + G   +A  Y  ++  +CK+ Q  +A++L  +M+   I  D  
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362

Query: 242 ILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             S +I      G L     L  E+ E + + T  +  N ++    + G  D    LL+ 
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 421

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MIK +                ++PN  +F ++I++ +K+GKL  A  L +EM   G   +
Sbjct: 422 MIKRK----------------INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y +LIDG C  N L+++ +++  M   G  P   T N +    C+   +   L L R
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 419 KMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           KM ++G     V +NTL I+  C+ GK   A     +MV     P+IV Y   + GL D 
Sbjct: 526 KMSLRGVVADTVTYNTL-IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              + ALE+F  I       D+  YNIII G+C A +V +A DLF  +  KG+ P V TY
Sbjct: 585 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 644

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N++I G CK G + +A L L R +E++  +PD  TY  LI      G    ++ L  E++
Sbjct: 645 NIMIGGLCKKGPLSEAEL-LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703

Query: 598 EKGCAPNRITFMALI 612
             G + +  T   +I
Sbjct: 704 RCGFSVDASTIKMVI 718



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 260/553 (47%), Gaps = 22/553 (3%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+ +F ++I    +   + FS L  A +K  + D    L ++M+   I  N  T  ++
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  ++  A     K+ K G+  +   +  +I GLC   ++  AL+L   M   G 
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 237 TPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            PD   ++ L+        E E  LL+ ++ E        +    ++ ++  +G    A 
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            LL+ M                 +  +  +   + III+ L K G LD A +LF EM   
Sbjct: 347 ELLRKM----------------EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   N+  YN LI G CN+ R ++  +LLR+M +    P   T + +     +   +  A
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L ++M  +G  P     T LI   CK     +A + +  MV +G  P+I  ++  I G
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                R+D  LELFR +   G   D V YN +I G C+  ++  A++LF EM+++ + P+
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 570

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TY +L++G C +G  ++A+    + +EK     D+  Y  +I G+C A + DDA  L+
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 629

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +  KG  P   T+  +I GLCK      A + FR M+E G  PD + +  LI A L +
Sbjct: 630 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 689

Query: 654 LNPPLAFEVLKEM 666
            +   + ++++E+
Sbjct: 690 GDATKSVKLIEEL 702



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 205/449 (45%), Gaps = 26/449 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G   EA +L D++   G C PN  +Y  +L  +CKS    L    L++M++ 
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D    + ++   C  G  D A ++FNE+   G     + ++IL+  F   G  D  
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M    I  N  TF VLI  FVK+ ++ +A +L  +M   G A D   Y  +I G
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDV 269
            CK   L+ A Q+   M   G  P+    + LI   C     D+G L L  K     R V
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG-LELFRK--MSLRGV 532

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
              T+  N++++     G ++ A  L Q M+  +                V PN  ++ I
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK----------------VPPNIVTYKI 576

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ L  +G+ + AL +F ++ +     ++ +YN +I G+CN+++++++++L   +   G
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 636

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            KP   T N M   LC++  +  A  L RKM   GH P      +LI+     G A ++ 
Sbjct: 637 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 696

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           + + ++ + GF  D       I  L D K
Sbjct: 697 KLIEELKRCGFSVDASTIKMVIDMLSDDK 725



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 1/223 (0%)

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           KA +A     DM+    LP ++ +S     +   K+ DL L L + +   G   ++   +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I+  C+ +++  A     ++I  G  P+  T++ LING C  G + +A+  + RM+E 
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PD+IT  TL++GLC++G+  +A++L ++M E GC PN +T+  ++  +CK  +   
Sbjct: 286 -GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A+   R M+E+ +K D   +  +I       +   AF +  EM
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 275/621 (44%), Gaps = 26/621 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           + Y+     L  SC+VD+  +  ++    G      T   LL     + +F+K   VF  
Sbjct: 179 HVYSTQFRNLGFSCAVDVFYLLARK----GTFPSLKTCNFLLSSLVKANEFEKCCEVFRV 234

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           + +    D   F+ ++ A  K G+++ A EL  +M+   I  N  T+  +I+G  +  R+
Sbjct: 235 MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 294

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A +L +KMT  G   +   Y  +I GL K    +    +  EM GSG  P+  + + L
Sbjct: 295 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNL 354

Query: 247 ITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG-- 302
           I      G  E  L +K++   +++   ++   S+M+    +  I+ A N L+ ++    
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 414

Query: 303 --EPIADVGV-----------EMLMIFKGTVSPNTSSFDIIINTLL----KDGKLDLALS 345
              P     V                 K  +S N    D+++  L+    KDGK   A  
Sbjct: 415 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 474

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+  + + G   +    N LI GLC + +L E+  +++EM E G      T N++    C
Sbjct: 475 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 534

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               V G   L  +M  +G +P +     L++ LC  GK  +A +   +    G + +I 
Sbjct: 535 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 594

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y   + G     R++    LF ++ +     + + YNIII   C+   VA A  L   M
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            +KG++P+ ATY+ LI+G C  G ++ A   +  M  KE   P+V+ YT LI G C  G+
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM-RKEGFVPNVVCYTALIGGYCKLGQ 713

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D A   W EM      PN+ T+  +I G CK      A      MKE G+ PD+  +  
Sbjct: 714 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 773

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           L + F    +   AF+V  +M
Sbjct: 774 LTNGFCKANDMDNAFKVCDQM 794



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 271/576 (47%), Gaps = 30/576 (5%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P    F  +I  L   G +E A  LF ++++ G+  PN  +YNC++  LC++  +D    
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGIS-PNVVTYNCIINGLCQNGRLDNAFE 299

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFS 146
             ++M   G   +  T   L+        FDK   V +E+I  G+  +  VF+ L+  + 
Sbjct: 300 LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYC 359

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G ++ A ++ + M   NI     T   L+ GF K  +++ A    +++  SG +    
Sbjct: 360 KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 419

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE- 265
               ++  LCK  +   A +    M      P   +L+ L+     +G+  L   E+W  
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK-HLEATELWFR 478

Query: 266 --DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMI------- 315
             ++      +  N+++  L   G + +A  +++ M+ +G P+  +    L++       
Sbjct: 479 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538

Query: 316 -----------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       K  + P+  +++ ++  L   GKLD A+ L+ E    G + N+  Y  
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +++G C +NR+E+   L  E+     +      N + +  C+  +V  AL L+  M+ +G
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 658

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P     + LI  +C  G   +A   + +M +EGF+P++VCY+A IGG   + ++D A 
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 718

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
             + ++ +    P+   Y ++I G CK   + +A +L  +M   G++P V TYN+L NG+
Sbjct: 719 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 778

Query: 545 CKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDG 579
           CK+ ++D A     +M  +  G P D ITYTTL+ G
Sbjct: 779 CKANDMDNAFKVCDQMATE--GLPVDEITYTTLVHG 812


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 262/589 (44%), Gaps = 55/589 (9%)

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           G   P  ++Y  L+   C++  +DL    L  +   G+  +  T TPLL+  C   +   
Sbjct: 81  GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 120 ALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDD---CNIRLNEKTFC 174
           A+ +    +        VFS  ILL          +A EL+  M D        +  ++ 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +I+GF K+   DKA   + +M     + D   Y  II  LCK + ++ A+++ + M  +
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G+ P                               N MT   NSI+    S+    +A  
Sbjct: 261 GVMP-------------------------------NCMTY--NSILHGYCSSEQPKEAIG 287

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            L+ M         GVE          P+  +++ +++ L K+G+   A  +F  MT+ G
Sbjct: 288 FLKKMRSD------GVE----------PDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              ++  Y  L+ G      L E + LL  M  +G  P H   N +     +++ V  A+
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +  KMR  G  P V     +I  LCK G   +A  +   M+ EG  P+I+ Y++ I  L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               + D A EL  ++   G C + + +N II   CK  RV E+E LF+ M+  G+ P+V
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY+ LI+G+C +G +D+A   LS M       PD +TY TLI+G C   R DDA+ L+ 
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSV-GMKPDCVTYNTLINGYCRVSRMDDALALFK 570

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           EM   G +PN IT+  ++ GL    R  AA   +  + + G + ++  +
Sbjct: 571 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/559 (26%), Positives = 266/559 (47%), Gaps = 35/559 (6%)

Query: 62  CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
           C+P+ +S   LL+ LC ++ S + +E+      D G G   D  + T ++  +   G  D
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA S ++E++D     + V +S ++ A  K   +DKA E++  M    +  N  T+  ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSIL 273

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG+    +  +A+    KM   G   D   Y+ ++  LCKN +   A +++  M   G+ 
Sbjct: 274 HGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG--SIDQAYNL 295
           PD      L+   + +G L  +                 ++++ ++V NG       +N+
Sbjct: 334 PDIATYCTLLQGYATKGALVEM-----------------HALLDLMVRNGIHPDHHVFNI 376

Query: 296 LQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  A  K E + +  +    + +  ++PN  ++  +I  L K G +D A+  F +M   G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N+ +Y +LI  LC  ++ +++ EL+ EM + G        NS+    C+   V+ + 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L   M   G +P V   + LI   C  GK  EA + L+ M   G  PD V Y+  I G 
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             + R+D AL LF+++ + G  P+++ YNII+ GL   +R A A++L+  +   G    +
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 535 ATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           +TYN++++G CK+   D+A+     LCL+ +        +  T+  +I  L   GR D+A
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDL------QLETRTFNIMIGALLKVGRNDEA 670

Query: 590 IMLWNEMEEKGCAPNRITF 608
             L+  +   G  P+  T+
Sbjct: 671 KDLFAALSANGLVPDVRTY 689



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 219/480 (45%), Gaps = 48/480 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI    +  R+D        + K GF  +A  +  ++ GLC +K+   A+ +    
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M      PD       + SC      T+L+K + ++                   N S  
Sbjct: 149 MTELSCMPD-------VFSC------TILLKGLCDE-------------------NRS-Q 175

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL  M       D G        G  +P+  S+  +IN   K+G  D A S + EM
Sbjct: 176 EALELLHMMAD-----DRG--------GGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                  +V  Y+++I  LC    ++++ E+L  M ++G  P   T NS+    C  +  
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+  ++KMR  G EP V     L+  LCK+G++ EA +    M + G  PDI  Y   
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + G      +     L   +  +G  PD   +NI+I    K ++V EA  +F++M   GL
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V TY  +I   CKSG++D AML   +M++ E  +P++I YT+LI  LCI  + D A 
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMID-EGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  EM ++G   N I F ++I   CK  R   +   F +M   G+KP++  +  LI  +
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN +L   C S         LK+M+  G   D  T   L+   C +G+  +A  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+ +   G   D   +  LL  ++  G + +   L++ M    I  +   F +LI  + 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ +VD+A+ +F KM + G   +   Y  +IG LCK+  ++ A+  + +M   G+TP+  
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 242 ILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQ 291
           + + LI S        L + + W+          DR +   T+  NSI+      G + +
Sbjct: 443 VYTSLIHS--------LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           +  L   M++      +GV+          PN  ++  +I+     GK+D A  L   M 
Sbjct: 495 SEKLFDLMVR------IGVK----------PNVITYSTLIDGYCLAGKMDEATKLLSSMF 538

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
            +G   +   YN LI+G C  +R++++  L +EM  SG  P   T N + + L   +   
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   +   G +  +    +++  LCK+    EA R   ++       +   ++  I
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G L+ + R D A +LF  + A+G  PDV  Y+++   L +   + E +DLF  M   G  
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 718

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +    N ++    + G+I +A   LS + EK 
Sbjct: 719 ANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKH 751



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 7/278 (2%)

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE--PWVKHNT 433
           E++  +  E+   G   + + LN     + R           R  R    +  P V    
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL-FRDICA 492
           +LI   C+ G+    F  L ++V++GF  + + ++  + GL   KR   A+++  R +  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK---GLIPSVATYNLLINGWCKSGN 549
             C PDV +  I++ GLC   R  EA +L + M      G  P V +Y  +ING+ K G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
            D+A      ML++   SPDV+TY+++I  LC     D A+ +   M + G  PN +T+ 
Sbjct: 212 SDKAYSTYHEMLDRRI-SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +++ G C  ++P+ A+   + M+  G++PD+  + +L+
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 41/317 (12%)

Query: 343 ALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           A+S +  M + G  +    V  Y  LI   C + RL+  +  L  + + GF+    T   
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + + LC  +    A+++V                                  L  M +  
Sbjct: 128 LLKGLCADKRTSDAMDIV----------------------------------LRRMTELS 153

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +PD+   +  + GL D  R   ALEL     D    G  PDVV+Y  +I+G  K     
Sbjct: 154 CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSD 213

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A   ++EM+ + + P V TY+ +I   CK   +D+AM  L+ M+ K    P+ +TY ++
Sbjct: 214 KAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV-KNGVMPNCMTYNSI 272

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C + +P +AI    +M   G  P+ +T+ +L+  LCK  R   A   F  M ++G+
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 637 KPDMFVFVALISAFLSE 653
           +PD+  +  L+  + ++
Sbjct: 333 EPDIATYCTLLQGYATK 349



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 53/382 (13%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G +I  L   G V++A + F+Q+  EGL  PN   Y  L+ +LC     D  E  + EM 
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHSLCIFDKWDKAEELILEML 468

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEV 151
           D G   +      ++  +C  G+  ++  +F+ ++  G V  +V  +S L+  +   G++
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG-VKPNVITYSTLIDGYCLAGKM 527

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A +L+  M    ++ +  T+  LI+G+ + SR+D AL LF +M  SG + +   Y++I
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           + GL   ++   A +LY  +  SG   +                                
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTY---------------------------- 619

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                N I+  L  N   D+A  + Q +     + D+ +E            T +F+I+I
Sbjct: 620 -----NIILHGLCKNNLTDEALRMFQNLC----LTDLQLE------------TRTFNIMI 658

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             LLK G+ D A  LF  ++  G + +V  Y+ + + L     LEE  +L   MEE+G  
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCT 718

Query: 392 PTHFTLNSMFRCLCRRQDVVGA 413
                LNS+ R L +R D+  A
Sbjct: 719 ANSRMLNSIVRKLLQRGDITRA 740



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P +  Y   IG      R+DL      ++  
Sbjct: 57  LADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVK 115

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G   + + +  ++ GLC  +R ++A D+    M     +P V +  +L+ G C      
Sbjct: 116 KGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQ 175

Query: 552 QAMLCLSRMLEKESG--SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +A+  L  M +   G  +PDV++YTT+I+G    G  D A   ++EM ++  +P+ +T+ 
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK+M
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 251/555 (45%), Gaps = 52/555 (9%)

Query: 113 NSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D ALS FN ++  H       F+ LL + +K  +      L  +MD   I  +  
Sbjct: 46  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 105

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  +LI+ F   +R+  A  +  K+ K G   D A +  +I GLC   ++  AL L+ +M
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM 165

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G G  P+                             V T   L N + ++    G+ + 
Sbjct: 166 IGEGFQPN-----------------------------VVTYGTLINGLCKV----GNTNA 192

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL++M +G    DV V                +  II++L KD ++  A +LF +M 
Sbjct: 193 AIRLLRSMEQGNCQPDVVV----------------YTSIIDSLCKDRQVTEAFNLFSKMV 236

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   ++F Y +LI  LCN    +    LL +M  S   P     +++   LC+   + 
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++V  M ++G EP V     L+   C   +  EA +    MV  G+ P+++ Y+  I
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   I+R+D A  LF ++C     P+ V YN ++   C   R+ +A  LF+EM+  G I
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P +ATY +L++  CK  ++D+AM  L + +E  +  PD+  YT +IDG+C AG  + A  
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALL-KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +++ +  KG  PN  T+  +I GLC+      A   F  M   G  PD   +  +    L
Sbjct: 475 IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLL 534

Query: 652 SELNPPLAFEVLKEM 666
                  A ++L+EM
Sbjct: 535 QNKEALRAIQLLQEM 549



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 243/522 (46%), Gaps = 23/522 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K+     V     +M  +G   D YTL  L+  +C+  +   A SV
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++  A  L ++M     + N  T+  LI+G  K
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
               + A++L   M +     D  +Y  II  LCK++Q+  A  L+S+M G GI+PD   
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI S  +  E   +T L+ ++   + +  + +  ++++  L   G I +A++++   
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF-STVVDALCKEGKITEAHDVVD-- 303

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        +MI +G V PN  +++ +++      ++D A+ +F  M   G   NV
Sbjct: 304 -------------MMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G C   R++++  L  EM +    P   T N++    C    +  A+ L  +
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHE 408

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +    +L+  LCK     EA   L  +      PDI  Y+  I G+     
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A ++F ++ + G  P+V  Y I+I+GLC+   + EA  LF EM   G  P   TYN 
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           +  G  ++    +A+  L  ML +   S DV T T L++ LC
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLAR-GFSADVSTTTLLVEMLC 569



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 206/428 (48%), Gaps = 23/428 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        +M 
Sbjct: 178 GTLINGLCKVGNTNAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T T L+   CN  ++    ++ N++I+   + D  +FS ++ A  K G++ 
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++++ M    +  N  T+  L+ G   +S +D+A+++FD M  +G+A +   Y+ +I
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G CK ++++ A  L+ EM    + P+    + L+  C   G L   +    E       
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCH-VGRLQDAIALFHE------- 408

Query: 273 TLLCNSIMRILVSNGSIDQ--AYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDI 329
                     +V++G I     Y +L   +  +   D  + +L   +G+ + P+   + I
Sbjct: 409 ----------MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ + + G+L+ A  +F  ++  G   NV  Y  +I+GLC    L+E+ +L  EM+ +G
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T N++ + L + ++ + A+ L+++M  +G    V   TLL++ LC         
Sbjct: 519 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 578

Query: 450 RFLTDMVQ 457
           + L++ VQ
Sbjct: 579 QILSEFVQ 586



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 1/192 (0%)

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           ++   +D AL  F  +      P  V +N +++ + K ++      L N+M + G+ P V
Sbjct: 45  LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 104

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T N+LIN +C    +  A   L+++L K    PD  T+TTLI GLC+ G+  DA+ L++
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKIL-KLGHQPDTATFTTLIRGLCVEGKIGDALHLFD 163

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M  +G  PN +T+  LI GLCK     AA+   R M++   +PD+ V+ ++I +   + 
Sbjct: 164 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 223

Query: 655 NPPLAFEVLKEM 666
               AF +  +M
Sbjct: 224 QVTEAFNLFSKM 235


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 278/599 (46%), Gaps = 65/599 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C+ G+   A  VF  +     V    ++ ++  + + G ++ A  LI  M     
Sbjct: 104 LIKRLCSGGRVADAERVFATLGASATV--VTYNTMVNGYCRAGRIEDARRLISGMP---F 158

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  TF  LI     + RV  AL +FD M   G +     Y +++   CK      A+ 
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM+  G  PD    + LI +  +EG++         D  +N        I+  L S+
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDV---------DEALN--------ILSDLPSH 261

Query: 287 GSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G    A     +L+++   E   +V      +     +P+  +F+ I+ +L + G +D A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           + +   M++ GC+ ++  Y++++DGLC+  R++++ ELL  ++  G KP      ++ + 
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381

Query: 404 LCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           LC  +    A  L+ +M      P  V  NT+ I  LC+ G    A + +  M + G  P
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV-IASLCQKGLVDRAIKVVEQMSENGCNP 440

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL- 521
           DIV Y++ I GL + + +D A+EL  ++ ++GC PD+V +N ++ GLC   R  +AE L 
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 522 --------------FNEMITK--------------------GLIPSVATYNLLINGWCKS 547
                         FN +IT                     G IP+ +TYN++++   K+
Sbjct: 501 VNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA 560

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G   +A+  LS M    +G+PD+ITY T+I  +  AG+ ++A+ L   M   G +P+ IT
Sbjct: 561 GKTQEALKLLSGM---TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTIT 617

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + +L  G+C+ D    A+     +++ G+ PD   +  ++  F       +A +    M
Sbjct: 618 YRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHM 676



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 247/559 (44%), Gaps = 63/559 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G V +A  +FD +   G C P+  +Y+ LL+A CK+       + L EM+  
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRG-CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEV 151
           G   D  T   L+   CN G  D+AL++ +++  HG   + V ++ +L +     +W EV
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEV 286

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           +   EL   M       +E TF  ++    ++  VD+A+++ D M++ G   D   Y  I
Sbjct: 287 E---ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI 343

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVKEIWEDR 267
           + GLC   +++ A++L S +K  G  PD      +L  L +    E    L+ + +  D 
Sbjct: 344 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDC 403

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
             + +T   N+++  L   G +D+A  +++ M                 +   +P+  ++
Sbjct: 404 PPDEVTF--NTVIASLCQKGLVDRAIKVVEQM----------------SENGCNPDIVTY 445

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + II+ L  +  +D A+ L   +   GC  ++  +N L+ GLC+ +R E++ +L+  M  
Sbjct: 446 NSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH 505

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           S   P   T N++   LC++  ++ A+  ++ M   G  P      +++  L K GK  E
Sbjct: 506 SDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE 565

Query: 448 AFRFLTDM---------------------------------VQEGFLPDIVCYSAAIGGL 474
           A + L+ M                                 V  G  PD + Y +   G+
Sbjct: 566 ALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGI 625

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                 D A+ +   +   G  PD   YN I+ G C+  R   A D F  M++ G +P  
Sbjct: 626 CREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDE 685

Query: 535 ATYNLLINGWCKSGNIDQA 553
           +TY +L+        +D+A
Sbjct: 686 STYIILLEALAYECLLDEA 704


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 224/480 (46%), Gaps = 42/480 (8%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A+  F++M +         ++ ++  + K K     L L  +M   GI P+   L  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 246 LITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI S      +    ++L K +      +T T    +++R +   G I +A +L   MI 
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATF--TTLIRGICVEGKIGEALHLFDKMI- 158

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           GE                  P+  ++  +IN L K G    A+ L   M Q  C  NVF 
Sbjct: 159 GEGF---------------RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +ID LC   ++ E++ L  EM   G  P  FT NS+   LC   +      L+ +M 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                P V     ++  LCK GK  EA   +  M+Q G  P++V Y+A + G   +  +D
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRV-------------------AEAEDLF 522
            A+++F  +   GC P+V++YN +I+G CK QR+                    EA  +F
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + M+ KG +P+V +YN LING+CK   ID+AM     M  +E   PD +TY+TLI GLC 
Sbjct: 384 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL-IPDTVTYSTLIHGLCH 442

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             R  DAI L++EM      PN +T+  L+  LCK      A+   + ++   + PD+ V
Sbjct: 443 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 257/571 (45%), Gaps = 39/571 (6%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        V F+ LL + +K         L  +MD   I  N  T  +L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F   +RV  A  +  K+ K G   D A +  +I G+C   ++  AL L+ +M G G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGF 162

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            PD      LI      G  +  ++ +     ++        N+I+  L  +  + +A+N
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 295 LLQAMIKGEPIADVGVEMLMIFK-------------------GTVSPNTSSFDIIINTLL 335
           L   M+      D+     +I                       + P+  SF+ +++ L 
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+GK+  A  +  +M Q G   NV  Y  L+DG C  + ++E+ ++   M   G  P   
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + N++    C+ Q +  A+                H T L+   C +    EA +    M
Sbjct: 343 SYNTLINGYCKIQRIDKAI----------------HYTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V +G +P+++ Y+  I G   I+R+D A+ LF ++C     PD V Y+ +I GLC  +R+
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A  LF+EM+    IP++ TY +L++  CK+  + +AM  L + +E  +  PD+     
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL-KAIEGSNLDPDIQVNNI 505

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            IDG+C AG  + A  L++ +  KG  P+  T+  +I GLC+      A   FR M E G
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              +  ++  +   FL       A ++L+EM
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 248/563 (44%), Gaps = 44/563 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K      +     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M     R +  T+  LI+G  K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +   Y+ II  LCK++Q+  A  L+SEM   GI+PD   
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + LI +  +  E   +   + E  D   M   +  N+++  L   G + +A++++  MI
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 301 KG--EPIA----------------DVGVEML--MIFKGTVSPNTSSFDIIIN-------- 332
           +   EP                  D  V++   M+ KG + PN  S++ +IN        
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM-PNVISYNTLINGYCKIQRI 357

Query: 333 ------TLLKDG-----KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
                 T L D       +D A+ +F  M   GCM NV  YN LI+G C   R++++  L
Sbjct: 358 DKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 417

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM      P   T +++   LC  + +  A+ L  +M      P +    +L+  LCK
Sbjct: 418 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 477

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +    EA   L  +      PDI   + AI G+     ++ A +LF ++ + G  PDV  
Sbjct: 478 NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWT 537

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y+I+I+GLC+   + EA  LF EM   G   +   YN +  G+ ++    +A+  L  M+
Sbjct: 538 YSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV 597

Query: 562 EKESGSPDVITYTTLIDGLCIAG 584
            +   S D  T T  +  L   G
Sbjct: 598 AR-GFSADASTMTLFVKMLSDDG 619



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 4/342 (1%)

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G +ML +    +S + + F    +  L    +D A+S F  M ++    +   +N L+  
Sbjct: 14  GTQMLSLLPHFLSLSHNRFH---SKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           +           L  +M+  G  P  +TL+ +    C    V  A +++ K+   GH+P 
Sbjct: 71  IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPD 130

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T LI+ +C  GK  EA      M+ EGF PD+V Y   I GL  +     A+ L  
Sbjct: 131 TATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 190

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +    C P+V AYN II  LCK ++V EA +LF+EM+TKG+ P + TYN LI+  C   
Sbjct: 191 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 250

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                   L+ M++ +   PDV+++ T++D LC  G+  +A  + ++M ++G  PN +T+
Sbjct: 251 EWKHVATLLNEMVDSKI-MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            AL+ G C       A+  F  M  KG  P++  +  LI+ +
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 200/453 (44%), Gaps = 38/453 (8%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A +R+L   +V+  C  +  A   +I  L     V EA  LF ++  +G+  P+ ++YN 
Sbjct: 184 AAIRLLGS-MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS-PDIFTYNS 241

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           L+ ALC  C    V   L EM D     D  +   ++   C  G+  +A  V +++I  G
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 132 WVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            V+ +V  ++ L+       E+D+A ++ + M       N  ++  LI+G+ K  R+DKA
Sbjct: 302 -VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 190 L-------------------QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           +                   ++FD M   G   +   Y+ +I G CK ++++ A+ L+ E
Sbjct: 361 IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 420

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    + PD    S LI        L   +    E        + C+ I  ++       
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE-------MVACSQIPNLVTYRI--- 470

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
               LL  + K   +A+    +  I    + P+    +I I+ + + G+L+ A  LF  +
Sbjct: 471 ----LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 526

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +  G   +V+ Y+ +I+GLC    L+E+ +L REM+E+G        N++ R   R  + 
Sbjct: 527 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 586

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             A+ L+++M  +G        TL +K L   G
Sbjct: 587 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 99/187 (52%), Gaps = 1/187 (0%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+  F  +      P  V +N +++ + K +  +    L ++M + G+ P++ T ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LIN +C    +  A   L+++L K    PD  T+TTLI G+C+ G+  +A+ L+++M  +
Sbjct: 102 LINSFCHLNRVGFAFSVLAKIL-KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P+ +T+  LI GLCK     AA+     M +K  +P++F +  +I +   +     A
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 660 FEVLKEM 666
           F +  EM
Sbjct: 221 FNLFSEM 227


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 271/591 (45%), Gaps = 26/591 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  ++E L + C +D+V+  L++M+  G    +     ++  Y   G  ++AL +F  I
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            + G      +++ LL A     +      L   M    +  N  T+ +L+    K  RV
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A +LF +M+  G   DA  Y  ++  LCK  +++ A +L    K     P   + + L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNAL 250

Query: 247 ITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           I     EG + + +K + E  D  V+   +  + I+  L  +G+++ A+ L   M     
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM----- 305

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                      F      N  +F  +I      GKL  AL L++ M Q GC  NV  YN 
Sbjct: 306 -----------FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI GLC++  LEE+ ++  +M+ SG  P   T + +     +  D+VGA     +M   G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P V   T ++  LCK+    +A   +  M  EG  P+ + ++  I GL    RV+ A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +L   +  HGC P++  YN ++  L +  +  EA  LF E+  + L P++ TYN ++ G+
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE-KGCAP 603
            ++G + +A+    + L + + +PD ITY T+I   C  G+   A  L   +   K   P
Sbjct: 535 SRAGMMGEALQLFGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           + IT+ +LI G C       A+        +G+ P+   + AL+  F   L
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 259/574 (45%), Gaps = 62/574 (10%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG  E+A  +F ++   G C P    YN LL+AL       ++      M+  G   + +
Sbjct: 122 VGSAEQALKMFYRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T   LL+  C + + D A  +F E+ + G   + V ++ ++ +  K G++D A EL  R 
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR- 239

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                + +   +  LI G  K+ R++ A++L  +M  +G   +   Y  II  LC +  +
Sbjct: 240 ----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
           E+A  L+++M   G   +    + LI  C   G+L   + ++W+           +  N+
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL-DLWKLMIQDGCEPNVVAYNT 354

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L SNGS+++A  +   M +   +                PN +++ I+I+   K G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCL----------------PNVTTYSILIDGFAKSG 398

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A   +  M   GC  NV  Y  ++D LC ++  +++  L+ +M   G  P   T N
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFN 458

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +  + LC    V  A+ L+ +M  QGH                                 
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERM--QGH--------------------------------- 483

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G LP+I  Y+  +  L  + + + A  LF++I A    P++V YN ++ G  +A  + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LF + + +G  P   TYN +I+ +CK G +  A   + R+   +   PD+ITYT+LI 
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           G C     ++A+   ++   +G  PN  T+ AL+
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 232/532 (43%), Gaps = 55/532 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E +F  ++  + + G  ++A ++  R+ +   +   + +  L+   + +++      L+ 
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M K G   +   Y++++  LCKN +++ A +L+ EM   G  PD    + +++S     
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS----- 223

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                               LC +        G ID A  L                   
Sbjct: 224 --------------------LCKA--------GKIDDAREL------------------- 236

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
              G   P+   ++ +I+ + K+G++++A+ L  EM   G   NV  Y+ +I+ LC S  
Sbjct: 237 --AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E ++ L  +M   G      T   + +    R  +  AL+L + M   G EP V     
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LC +G   EA +    M + G LP++  YS  I G      +  A E +  + +HG
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+VV Y  ++  LCK     +A  L  +M  +G  P+  T+N  I G C +G ++ AM
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L RM +     P++ TY  L+D L    + ++A  L+ E+E +   PN +T+  ++ G
Sbjct: 475 KLLERM-QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +      AL  F     +G  PD   +  +I A+  +    +A ++++ +
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 228/492 (46%), Gaps = 27/492 (5%)

Query: 181 VKKSRVDKALQ----LFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +K+ + D+ L      F  +  S  F   A+ Y V+I  L +  +++M   +  +MK  G
Sbjct: 45  LKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDG 104

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN- 294
           I    ++   +I      G     +K  +   +       C   +RI          YN 
Sbjct: 105 INCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG-----CKPTVRI----------YNH 149

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL A++       +      + K  + PN  +++I++  L K+ ++D A  LF EM+  G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +   Y  ++  LC + +++++ EL        FKP+    N++   +C+   +  A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+ +M   G +P V   + +I  LC  G    AF     M   G   +I  ++  I G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               ++  AL+L++ +   GC P+VVAYN +I GLC    + EA  + ++M   G +P+V
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY++LI+G+ KSG++  A    +RM+      P+V+TYT ++D LC     D A  L  
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMIS-HGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M  +GC PN ITF   I GLC   R   A+     M+  G  P++  +  L+ A     
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503

Query: 655 NPPLAFEVLKEM 666
               AF + +E+
Sbjct: 504 KYEEAFGLFQEI 515



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 206/464 (44%), Gaps = 63/464 (13%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S L +A +I   R LA      R   S      LI  +   G +E A  L  ++   G
Sbjct: 220 MVSSLCKAGKIDDARELA-----GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ-------VY-- 111
           +  PN  SY+C++ +LC S +V+L      +M   G   + +T TPL++       +Y  
Sbjct: 275 V-DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 112 --------------------------CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
                                     C++G  ++AL V +++   G + +   +SIL+  
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F+K G++  A E   RM     R N  T+  ++    K S  D+A  L +KMT  G   +
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVK 261
              ++  I GLC N ++E A++L   M+G G  P+    ++L+ +    +   E   L +
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           EI E R++    +  N+++            Y   +A + GE +   G  ++   +GT +
Sbjct: 514 EI-EARNLQPNLVTYNTVL------------YGFSRAGMMGEALQLFGKALV---RGT-A 556

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYE 380
           P++ +++ +I+   K GK+ +A  L   ++ +     ++  Y +LI G CN   +EE+  
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            L +    G  P   T N++ RC       +G ++++  +  +G
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 243/495 (49%), Gaps = 35/495 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF +L+H    K  +  AL    KM   G + DA  Y+ ++   C+   L  A  L 
Sbjct: 208 NHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLL 267

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRDVNTMTLLCNSIMRI 282
           + MK  GI P     + L+++ +  G   + T +V+ +     + D+ T  +L       
Sbjct: 268 ARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAG---- 323

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +D+A+ L   M           E L    G VSP+  +++ +++   K  +   
Sbjct: 324 LCQAGKVDEAFKLKDEM-----------EQL----GIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL+L  EM + G   ++  +N ++ GLC   +LEE+   L  M E G  P   T N++  
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQE 458
             C+  +V  A  L+ +M   G    +K +T     L+  LCK  +  EA   L    Q 
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSG----LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQR 484

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+PD V Y   +       + + AL L+ ++      P +  YN +I GL    ++ EA
Sbjct: 485 GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEA 544

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D  NE++  GL+P   TYN++I+ +CK G++++A    ++M+E  S  PDV+T  TL++
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN-SFKPDVVTCNTLMN 603

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC+ GR + A+ L+    EKG   + IT+  LI  LCK +    AL  F  M+ +G++P
Sbjct: 604 GLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQP 663

Query: 639 DMFVFVALISAFLSE 653
           D+F +  L+SA LSE
Sbjct: 664 DVFTYNVLLSA-LSE 677



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 158/604 (26%), Positives = 265/604 (43%), Gaps = 45/604 (7%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PLR L + ++ S  F +       +     + L   A  L    +R G   P+  + N +
Sbjct: 121 PLRHLHRHLLAS--FPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAV 178

Query: 73  LEALCKSCSVD----------LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           L AL +S S            L+ +RL          + YT   L+  +C+ G    ALS
Sbjct: 179 LSALARSPSTSPQASLDAFHSLIALRLHP--------NHYTFNLLVHTHCSKGTLADALS 230

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             +++   G   + V ++ LL A  + G + +A  L+ RM    I     T+  L+  + 
Sbjct: 231 TLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYA 290

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDF 240
           +   + +A  + + MT  GF  D   Y+V+  GLC+  +++ A +L  EM+  GI +PD 
Sbjct: 291 RLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDV 350

Query: 241 EILSKLITSC----SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              + L+ +C         L LL  E   ++ V +  +  N I++ L   G +++A   L
Sbjct: 351 VTYNTLVDACFKCQRSSDALNLL--EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +                M+ +  ++P+  +++ +I+   K G +  A  L  EM + G  
Sbjct: 409 E----------------MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + F  N L+  LC   R EE+ ELLR   + GF P   +  ++     +      AL L
Sbjct: 453 MDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCL 512

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +   P +     LIK L   GK  EA   L ++++ G +PD   Y+  I     
Sbjct: 513 WDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK 572

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              ++ A +    +  +   PDVV  N +++GLC   R+ +A  LF   + KG    V T
Sbjct: 573 EGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVIT 632

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI   CK  ++D A+   + M E     PDV TY  L+  L  AGR  +A  + +++
Sbjct: 633 YNTLIQALCKDNDVDTALRFFADM-EVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691

Query: 597 EEKG 600
            E G
Sbjct: 692 NESG 695



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 163/348 (46%), Gaps = 37/348 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +F+++++T    G L  ALS   +M   G   +   YN L++  C    L E+ 
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  M++ G  PT  T N++     R    +G               W+K  T +++  
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYAR----LG---------------WIKQATDVVE-- 303

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG-CCPD 498
                AM AF         GF PD+  Y+    GL    +VD A +L  ++   G   PD
Sbjct: 304 -----AMTAF---------GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPD 349

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV YN ++    K QR ++A +L  EM  KG+  S+ T+N+++ G C+ G +++A+  L 
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M E E  +PDVITY TLID  C AG    A +L +EM   G   +  T   L+  LCK 
Sbjct: 410 MMTE-EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R   A    R   ++G  PD   +  +++A+  E  P  A  +  EM
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 229/509 (44%), Gaps = 57/509 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC--SVDLVEMRLKEMQDYGWGYD 100
            G V+EA  L D++++ G+  P+  +YN L++A C  C  S D + + L+EM++ G    
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDA-CFKCQRSSDALNL-LEEMREKGVKSS 384

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIE 159
             T   +++  C  GQ ++AL     + + G   D   ++ L+ A  K G V KA  L++
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    ++++  T   L++   K+ R ++A +L     + GF  D   Y  ++    K  
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEY 504

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           + E AL L+ EM    +TP     + LI   S  G+LT  + ++             N +
Sbjct: 505 KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL-------------NEL 551

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M                              EM ++      P+ ++++III+   K+G 
Sbjct: 552 M------------------------------EMGLV------PDDTTYNIIIHAYCKEGD 575

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L+ A     +M +     +V   N L++GLC   RLE++ +L     E G K    T N+
Sbjct: 576 LEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNT 635

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + + LC+  DV  AL     M V+G +P V    +L+  L + G+++EA + L  + + G
Sbjct: 636 LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP--DVVAYNIIISGLCKAQRVAE 517
            L     Y  +I   ++        E+  DI + G     D  +YN  I  LC   ++ E
Sbjct: 696 KLYGRFFYP-SIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKE 754

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCK 546
           A+ + +EM+ KG+    +TY  L+ G  K
Sbjct: 755 AKAVLDEMMQKGMSVDNSTYITLMEGLIK 783


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 262/569 (46%), Gaps = 67/569 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  +YN +L AL  + S+         M   G   + YT   L++  C  G   +ALS
Sbjct: 113 VPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  ++   G     V ++ L+ AF + GEVD A  L+  M D  ++ N  TF  +++G  
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +++ A ++FD+M + G A D   Y+ ++GG CK      AL +++EM   GI PD  
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI                                  ++   G+++ A  L++ M  
Sbjct: 292 TFTSLI---------------------------------HVMCKAGNLEWAVTLVRQM-- 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                + G++M          N  +F  +I+   K G LD AL   R M Q     +V  
Sbjct: 317 ----RERGLQM----------NEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVC 362

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+G C   R++E+ ELL EME  G KP   T +++    C+  D   A  L ++M 
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G  P     + LI+ LC+  +  +A     +M++ G  PD   Y++ I G      V+
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL L   +   G  PDVV Y+++I+GL K+ R  EA+ L  ++  +  IP+   Y+ L+
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 542 N---------------GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           +               G+C  G +++A      ML++ + + D   Y+ LI G C AG  
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR-NWNLDGSVYSVLIHGHCRAGNV 601

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGL 615
             A+    +M ++G APN  + ++LI GL
Sbjct: 602 MKALSFHKQMLQRGFAPNSTSTISLIRGL 630



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 4/333 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +++ ++   L D  L  A   F  M   G   NV+ YN LI  LC     +E+  +
Sbjct: 114 PSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           LR+M  +G  P   T N++     R  +V GA  LV  M   G +P +     ++  +CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  +A +   +M++EG  PD V Y+  +GG         AL +F ++   G  PDVV 
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I  +CKA  +  A  L  +M  +GL  +  T+  LI+G+CK G +D A+L + R +
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV-RGM 351

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK-CDR 620
            +    P V+ Y  LI+G C+ GR D+A  L +EME KG  P+ +T+  +I+  CK CD 
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A  ++ +M+ EKG+ PD   + +LI     E
Sbjct: 412 HSAFELNQQML-EKGVLPDAITYSSLIRVLCEE 443



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 241/557 (43%), Gaps = 80/557 (14%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD----LVEMRL- 89
            LIR L   G  +EA  +   ++  G C PN  +YN L+ A  ++  VD    LV M L 
Sbjct: 155 ILIRALCGRGHRKEALSILRDMRGAG-CGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLD 213

Query: 90  ------------------------------KEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
                                          EM   G   D  +   L+  YC +G   +
Sbjct: 214 GGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHE 273

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           ALSVF E+   G + + V F+ L+    K G ++ A  L+ +M +  +++NE TF  LI 
Sbjct: 274 ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALID 333

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF KK  +D AL     M +         Y+ +I G C   +++ A +L  EM+  G+ P
Sbjct: 334 GFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 393

Query: 239 DFEILSKLITS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D    S +I++    C       L   +   ++ V    +  +S++R+L     +  A+ 
Sbjct: 394 DVVTYSTIISAYCKNCDTHSAFEL--NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L + MIK      +G++          P+  ++  +I+   K+G ++ ALSL  +M + G
Sbjct: 452 LFKNMIK------LGLQ----------PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V  Y+ LI+GL  S R  E+ +LL ++      P +   +++  C CR+ ++   L
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC-CRKAELKSVL 554

Query: 415 NLVRKMRVQG--------HEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQE 458
            L++   ++G        ++  +  N        ++LI   C+ G  M+A  F   M+Q 
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNIIISGLCKAQRVA 516
           GF P+     + I GL +   V  A ++ + +    CC   D  A   +I        V 
Sbjct: 615 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLL--NCCSLADAEASKALIDLNLNEGNVD 672

Query: 517 EAEDLFNEMITKGLIPS 533
              D+ + M   GL+PS
Sbjct: 673 AVLDVLHGMAKDGLLPS 689



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 37/208 (17%)

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P V+AYN ++  L  A  +  A   F+ M++ G+ P+V TYN+LI   C  G+  +A
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 554 MLCLSRMLEKESGSPDVITYTTL-----------------------------------ID 578
           +  L  M     G P+V+TY TL                                   ++
Sbjct: 170 LSILRDMRGAGCG-PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G+C AG+ +DA  +++EM  +G AP+ +++  L+ G CK      AL  F  M +KG+ P
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D+  F +LI       N   A  ++++M
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQM 316


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 304/644 (47%), Gaps = 36/644 (5%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L  L KS  + + +    E++ 
Sbjct: 535  LFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 593

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    + +FD+A+ +F ++I++  V D    + L+    K G  D+
Sbjct: 594  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A  +  ++ + N+   + T+  L+ G  ++ +V + + L ++M  S +  +   Y+ I+ 
Sbjct: 654  AWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 713

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-----D 268
             LCKN  +  AL +   M   G  PD    + +I     E           + +     D
Sbjct: 714  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 773

Query: 269  VNTMTLLCNSIMRI--------------LVSNGSIDQA--YNLLQAMIKGEPIADVGVEM 312
              T+  +  S ++I              L      D++  ++L++ ++K       G+E 
Sbjct: 774  YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK-----KAGIEK 828

Query: 313  LMIFKGTVSPNTSSFD-----IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
             + F   ++ +  + D      +I  L K  K   A  L ++    G      LYN+LI 
Sbjct: 829  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 888

Query: 368  GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            GL + N ++ +  L  EM+E G  P  FT N +   + +   +   L +  +M  +G+E 
Sbjct: 889  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 948

Query: 428  -WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
             +V +NT +I  L K  +  +A     +++ +GF P    Y   + GL+   R++ A  L
Sbjct: 949  TYVTYNT-IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 1007

Query: 487  FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            F ++  +GC  +   YNI+++G   A    +   LF +M+ +G+ P + +Y ++I+  CK
Sbjct: 1008 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1067

Query: 547  SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            +G ++  +    ++LE     PD+ITY  LIDGL  + R ++A+ L+NEM++KG  PN  
Sbjct: 1068 AGQLNDGLTYFRQLLEM-GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1126

Query: 607  TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            T+ +LI  L K  +   A   +  +  KG KP++F + ALI  +
Sbjct: 1127 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1170



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 182/724 (25%), Positives = 314/724 (43%), Gaps = 96/724 (13%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI+ L   G + +A  +F ++K+     P+  +Y  LL+    +     V      M+  
Sbjct: 396  LIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 454

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
            G+  +    T ++   C  G+  +AL +F+E+   G V E + ++ L+  F K      A
Sbjct: 455  GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 514

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             EL + MD    + N  T  + I+ + K     KA+Q ++ M   G   D    + ++ G
Sbjct: 515  LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 574

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
            L K+ +L MA +++ E+K  G++PD    + +I  CS   +    VK  ++  + N +  
Sbjct: 575  LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634

Query: 273  TLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------IADVGVE---------ML 313
             L  NS++  L   G  D+A+ +   +  +  EP        +A +G E         + 
Sbjct: 635  VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 694

Query: 314  MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
             ++     PN  +++ I++ L K+G ++ AL +   MT  GC+ ++  YN +I GL    
Sbjct: 695  EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 754

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------- 423
            R  E++ +  +M++    P + TL ++     +   +  AL++++   +Q          
Sbjct: 755  RYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 813

Query: 424  -----------GHEPWVKHNTL---------------LIKELCKHGKAMEAFRFLTDMVQ 457
                       G E  ++   +               LIK LCK  KA+EA   +     
Sbjct: 814  HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 873

Query: 458  EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
             G       Y++ I GL+D   +D+A  LF ++   GC PD   YN+++  + K+ R+ E
Sbjct: 874  FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 933

Query: 518  AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
               +  EM  KG   +  TYN +I+G  KS  ++QA + L   L  +  SP   TY  L+
Sbjct: 934  MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA-IDLYYNLMSQGFSPTPCTYGPLL 992

Query: 578  DGLCIAGRPDDAIMLWNEMEEKGCAPN-----------RI-------------------- 606
            DGL  AGR +DA  L+NEM E GC  N           RI                    
Sbjct: 993  DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1052

Query: 607  ----TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
                ++  +I  LCK  +    L +FR + E G++PD+  +  LI           A  +
Sbjct: 1053 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1112

Query: 663  LKEM 666
              EM
Sbjct: 1113 FNEM 1116



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 272/630 (43%), Gaps = 53/630 (8%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K R   +  +  +++  +   G V +   +FD ++R+ +   N  ++  +   L     +
Sbjct: 208 KPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGL 266

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSIL 141
               + L  M++ G   + YT   L+     SG   +AL V+  ++  G V     +S+L
Sbjct: 267 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 326

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +VAF K  +V+    L+  M+   ++ N  ++ + I    +  R D+A ++  KM   G 
Sbjct: 327 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 386

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   + V+I  LC   ++  A  ++ +MK S   PD      L+    D G+ +  V 
Sbjct: 387 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD-SQSVM 445

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           EIW                     N      YN                           
Sbjct: 446 EIW---------------------NAMKADGYN--------------------------- 457

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N  ++  +I+ L + G++  AL +F EM Q G +   + YN+LI G   ++R  ++ EL
Sbjct: 458 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 517

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            + M+  G KP  +T         +  + + A+     M+ +G  P V     ++  L K
Sbjct: 518 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 577

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+   A R   ++   G  PD + Y+  I       + D A+++F D+  + C PDV+A
Sbjct: 578 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 637

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            N +I  L KA R  EA  +F ++    L P+  TYN L+ G  + G + + M  L  M 
Sbjct: 638 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 697

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P++ITY T++D LC  G  +DA+ +   M  KGC P+  ++  +I GL K +R 
Sbjct: 698 HSNY-PPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERY 756

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFL 651
             A   F  MK K + PD      ++ +F+
Sbjct: 757 NEAFSIFCQMK-KVLIPDYATLCTILPSFV 785



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 232/536 (43%), Gaps = 27/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  I LN  T+  L++  VK     +AL+++  M
Sbjct: 252 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 311

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y V++    K + +E  L L  EM+  G+ P+   + I  +++      
Sbjct: 312 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 371

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   ++ ++  +    DV T T+L    +++L   G I  A ++   M K +       
Sbjct: 372 DEAYRILAKMENEGCKPDVITHTVL----IQVLCDAGRISDAKDVFWKMKKSDQ------ 421

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  ++  +++    +G     + ++  M   G   NV  Y  +ID LC
Sbjct: 422 ----------KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 471

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R+ E+ E+  EM++ G  P  ++ NS+     +      AL L + M + G +P   
Sbjct: 472 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            + L I    K G++++A +    M  +G +PD+V  +A + GL    R+ +A  +F ++
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 591

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y ++I    KA +  EA  +F +MI    +P V   N LI+   K+G  
Sbjct: 592 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 651

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A     ++ E     P   TY TL+ GL   G+  + + L  EM      PN IT+  
Sbjct: 652 DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++  LCK      AL     M  KG  PD+  +  +I   + E     AF +  +M
Sbjct: 711 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 766



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 219/509 (43%), Gaps = 36/509 (7%)

Query: 36   LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-----LVEMRL 89
            ++ CL   G V +A +ML+    +   C+P+  SYN ++  L K    +       +M+ 
Sbjct: 711  ILDCLCKNGAVNDALDMLYSMTTKG--CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 768

Query: 90   KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSK 147
              + DY       TL  +L  +   G   +AL +  +         D      L+    K
Sbjct: 769  VLIPDYA------TLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 822

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               ++K+ E  E +    I L++   C LI    K+ +  +A +L  K    G +    +
Sbjct: 823  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 882

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIW 264
            Y+ +I GL     +++A  L++EMK  G  PD E    L+     +    E  L V+E  
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEM 941

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              +   +  +  N+I+  LV +  ++QA +L   ++                    SP  
Sbjct: 942  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ----------------GFSPTP 985

Query: 325  SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             ++  +++ LLK G+++ A +LF EM + GC  N  +YN L++G   +   E+   L ++
Sbjct: 986  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045

Query: 385  MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
            M + G  P   +   +   LC+   +   L   R++   G EP +    LLI  L K  +
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105

Query: 445  AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              EA     +M ++G +P++  Y++ I  L    +   A +++ ++   G  P+V  YN 
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1165

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +I G   +     A   +  MI  G +P+
Sbjct: 1166 LIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 289/644 (44%), Gaps = 59/644 (9%)

Query: 2   ASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF----LIRCLGSVGLVEEANMLFDQVK 57
           A IL   R+    RV   + + S CF   G++G     L+R       + E +  F  ++
Sbjct: 156 ACILRMVRKSGVSRVKVVESLISTCFYF-GSVGLIYDLLVRTYVQAKKLREGSEAFQILR 214

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+G+ V  N + N LL  L ++  VDL      E+   G   + YTL  ++   C   +F
Sbjct: 215 RKGVSVSIN-ACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKF 273

Query: 118 DKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           +  +   +++   G + D   ++ L+ A+ + G V++A +L+       +     T+  +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           ++G  K  + D+A  +  +M + G   +AA Y+ ++  +C+   +  A +++ EM   G+
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD    S LI                                  +L  NG + QA    
Sbjct: 394 LPDLVSFSSLIG---------------------------------VLARNGHLYQALMHF 420

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +                  + P+   + I+I+   ++G L  AL +  EM   GC 
Sbjct: 421 REMERS----------------GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF 464

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN  ++GLC      ++  L  EM E G  P  +T  ++ R  C+  ++  ALNL
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524

Query: 417 VRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
              M     +P  V +NTL I   CK G+   A     DM+++  +PD + Y   + G  
Sbjct: 525 FEAMVRTNLKPDKVTYNTL-IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               +  AL L   +   G  P++V  N +I G C++  + +A +  ++MI+ G+IP   
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN LI+G+ K  N+++A + ++ M EK     ++ITY  +++G C  G+  +A  +  +
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEM-EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           M E G  P+  T+ +LI G    D  + A      M ++G+ PD
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 249/516 (48%), Gaps = 30/516 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+ G V+   VD A +++ ++ + G   +    ++++  LCK+++ E  +   S+M+G G
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSI 289
           +  D    + LI +   EG    LV+E ++       R +    L  N+I+  L   G  
Sbjct: 288 VFADIVTYNTLINAYCREG----LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343

Query: 290 DQAYNLLQAMIKG--EPIA-------------DVGVEMLMIF----KGTVSPNTSSFDII 330
           D+A ++L  M++    P A             D  +E   IF    +  V P+  SF  +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I  L ++G L  AL  FREM + G + +  +Y  LIDG C +  L ++ ++  EM   G 
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                T N+    LC+++    A  L  +M  +G  P     T LI+  CK G   +A  
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               MV+    PD V Y+  I G      +  A EL+ D+      PD ++Y  +++G C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            +  + EA +L ++M+ KG+ P++ T N LI G+C+SG++ +A   LS+M+      PD 
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDS 642

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            +Y TLIDG       + A +L NEME++G   N IT+  ++ G C   + + A    R 
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E G+ PD   + +LI+  +S+ N   AF    EM
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 245/505 (48%), Gaps = 26/505 (5%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS--GFASDAAMYDVIIGGLCKNKQLEMA 224
           RL+E   C+L    V+KS V + +++ + +  +   F S   +YD+++    + K+L   
Sbjct: 150 RLSEAQACIL--RMVRKSGVSR-VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG 206

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            + +  ++  G++      +KL+           LV+  W D        L   I   +V
Sbjct: 207 SEAFQILRRKGVSVSINACNKLLGG---------LVRTGWVD--------LAWEIYGEVV 249

Query: 285 SNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
             G     Y L   + A+ K     +V   +  +    V  +  +++ +IN   ++G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L    +  G    +  YN ++ GLC   + + + ++L EM + G  P   T N++ 
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             +CRR +++ A  +  +M  +G  P +   + LI  L ++G   +A     +M + G +
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD V Y+  I G      +  AL++  ++ A GC  DVV YN  ++GLCK +  A+A+ L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           FNEM+ +G++P   T+  LI G+CK GN+D+A+     M+ + +  PD +TY TLIDG C
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV-RTNLKPDKVTYNTLIDGFC 548

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            AG    A  LW++M  K   P+ I++  ++ G C       AL     M EKG++P++ 
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               LI  +    + P A+E L +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 234/496 (47%), Gaps = 19/496 (3%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           + +L+  +V+  ++ +  + F  + + G +      + ++GGL +   +++A ++Y E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 233 GSGITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
             GI  +   L+ ++ + C D   E  +      E + V    +  N+++      G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A+ LL +       +  G+E          P   +++ I+  L K GK D A  +  EM
Sbjct: 310 EAFQLLNS------FSSRGME----------PGLLTYNAILYGLCKIGKYDRAKDVLIEM 353

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q+G   N   YN L+  +C  + + E+ E+  EM   G  P   + +S+   L R   +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL   R+M   G  P     T+LI   C++G   +A +   +M+  G   D+V Y+  
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL   K    A  LF ++   G  PD   +  +I G CK   + +A +LF  M+   L
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P   TYN LI+G+CK+G + +A      M+ K+   PD I+Y T+++G C +G   +A+
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI-IPDHISYGTVLNGFCSSGLLPEAL 592

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L ++M EKG  PN +T   LI G C+      A  +   M   G+ PD F +  LI  +
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652

Query: 651 LSELNPPLAFEVLKEM 666
           L E N   AF ++ EM
Sbjct: 653 LKEANLEKAFILINEM 668



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 211/501 (42%), Gaps = 20/501 (3%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L + R+   +     D+     F        LI      GLVEEA  L +     G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  P   +YN +L  LCK    D  +  L EM   G   +  T   LL   C      +A
Sbjct: 323 M-EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+E+   G + + V FS L+   ++ G + +A      M+   I  +   + +LI G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   +  AL++ D+M   G   D   Y+  + GLCK K    A  L++EM   G+ PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 240 FEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           F   + LI     +G +   L + E     ++    +  N+++      G + +A  L  
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI+ + I                P+  S+  ++N     G L  AL+L  +M + G   
Sbjct: 562 DMIRKDII----------------PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N+   N LI G C S  + ++YE L +M  +G  P  F+ N++     +  ++  A  L+
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILI 665

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M  +G +  +    L++   C  GK  EA + L  M++ G  PD   YS+ I G +  
Sbjct: 666 NEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQ 725

Query: 478 KRVDLALELFRDICAHGCCPD 498
             +  A     ++   G  PD
Sbjct: 726 DNMKEAFRFHDEMLQRGLVPD 746


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 304/644 (47%), Gaps = 36/644 (5%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L  L KS  + + +    E++ 
Sbjct: 489  LFINYYGKSGESIKAIQRYELMKSKGI-VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 547

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    + +FD+A+ +F ++I++  V D  V + L+    K G  D+
Sbjct: 548  MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A ++  ++ + N+   + T+  L+ G  ++ +V + + L ++M  S +  +   Y+ I+ 
Sbjct: 608  AWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILD 667

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-----D 268
             LCKN  +  AL +   M   G  PD    + +I     E           + +     D
Sbjct: 668  CLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 727

Query: 269  VNTMTLLCNSIMRI--------------LVSNGSIDQA--YNLLQAMIKGEPIADVGVEM 312
              T+  +  S ++I              L      D++  ++L++ ++K       G E 
Sbjct: 728  YATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK-----KAGTEK 782

Query: 313  LMIFKGTVSPNTSSFD-----IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
             + F   ++ +  + D      +I  L K  K   A  L ++    G       YN+LI 
Sbjct: 783  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLIC 842

Query: 368  GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            GL + N ++ +  L  EM+E G  P  FT N +   + +   +   L +  +M  +G+E 
Sbjct: 843  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 902

Query: 428  -WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
             +V +NT +I  L K  +  +A     +++ +GF P    Y   + GL+   R++ A  L
Sbjct: 903  TYVTYNT-IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 961

Query: 487  FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            F ++  +GC  +   YNI+++G   A    +   LF +M+ +G+ P + +Y ++I+  CK
Sbjct: 962  FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1021

Query: 547  SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            +G ++  +    ++LE     PD+ITY  LIDGL  + R ++A+ L+NEM++KG  PN  
Sbjct: 1022 AGQLNDGLTYFRQLLEM-GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1080

Query: 607  TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            T+ +LI  L K  +   A   +  +  KG KP++F + ALI  +
Sbjct: 1081 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1124



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 189/757 (24%), Positives = 327/757 (43%), Gaps = 98/757 (12%)

Query: 4    ILSRARRI-APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
            +L +ARR     R+LA+ +    C         LI+ L   G + +A  +F ++K+    
Sbjct: 318  VLGQARRFDEAYRILAE-MENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ- 375

Query: 63   VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
             P+  +Y  LL+    +     V      M+  G+  +    T ++   C  G+  +AL 
Sbjct: 376  KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 435

Query: 123  VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +F+E+   G V E + ++ L+  F K      A EL + MD    + N  T  + I+ + 
Sbjct: 436  MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYG 495

Query: 182  KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            K     KA+Q ++ M   G   D    + ++ GL K+ +L MA +++ E+K  G++PD  
Sbjct: 496  KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 555

Query: 242  ILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAM 299
              + +I  CS   +    VK  ++  + N +   L+ NS++  L   G  D+A+ +   +
Sbjct: 556  TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615

Query: 300  --IKGEP--------IADVGVE---------MLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              +  EP        +A +G E         +  ++     PN  +++ I++ L K+G +
Sbjct: 616  KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAV 675

Query: 341  DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
            + AL +   MT  GC+ ++  YN +I GL    R  E++ +  +M++    P + TL ++
Sbjct: 676  NDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTI 734

Query: 401  FRCLCRRQDVVGALNLVRKMRVQ---------------------GHEPWVKHNTL----- 434
                 +   +  AL+++++  +Q                     G E  ++   +     
Sbjct: 735  LPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSG 794

Query: 435  ----------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                      LIK LCK  KA+EA   +      G       Y++ I GL+D   +D+A 
Sbjct: 795  ITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAE 854

Query: 485  ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
             LF ++   GC PD   YN+++  + K+ R+ E   +  EM  KG   +  TYN +I+G 
Sbjct: 855  GLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGL 914

Query: 545  CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
             KS  ++QA + L   L  +  SP   TY  L+DGL  AGR +DA  L+NEM E GC  N
Sbjct: 915  VKSRRLEQA-IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKAN 973

Query: 605  RITFMALITG-----------------------------------LCKCDRPRAALVHFR 629
               +  L+ G                                   LCK  +    L +FR
Sbjct: 974  CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFR 1033

Query: 630  MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             + E G++PD+  +  LI           A  +  EM
Sbjct: 1034 QLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1070



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 161/631 (25%), Positives = 274/631 (43%), Gaps = 56/631 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  G VG + E   +FD ++R+ +   N  ++  +   L     +    + L  M++ 
Sbjct: 178 LMRDHGRVGDMAE---VFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA 233

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + YT   L+     SG   +AL V+  ++  G V     +S+L+VAF K  +V+  
Sbjct: 234 GIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 293

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   ++ N  ++ + I    +  R D+A ++  +M   G   D   + V+I  
Sbjct: 294 LWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQV 353

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   ++  A  ++ +MK S   PD      L+   +D GE +  V EIW          
Sbjct: 354 LCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGE-SQSVMEIW---------- 402

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                      N      YN                            N  ++  +I+ L
Sbjct: 403 -----------NAMKADGYN---------------------------DNVVAYTAVIDAL 424

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G++  AL +F EM Q G +   + YN+LI G   ++R  ++ EL + M+  G KP  
Sbjct: 425 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNG 484

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T         +  + + A+     M+ +G  P V     ++  L K G+   A R   +
Sbjct: 485 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 544

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  PD + Y+  I       + D A+++F D+  + C PDV+  N +I  L KA R
Sbjct: 545 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGR 604

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  +F ++    L P+  TYN L+ G  + G + + M  L  M       P++ITY 
Sbjct: 605 GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY-PPNLITYN 663

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T++D LC  G  +DA+ +   M  KGC P+  ++  +I GL K +R   A   F  MK K
Sbjct: 664 TILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-K 722

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            + PD      ++ +F+       A  ++KE
Sbjct: 723 VLIPDYATLCTILPSFVKIGLMKEALHIIKE 753



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 233/536 (43%), Gaps = 27/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  I LN  T+  L++  VK     +AL+++  M
Sbjct: 206 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVM 265

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y V++    K + +E  L L  EM+  G+ P+   + I  +++      
Sbjct: 266 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRF 325

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   ++ E+  +    DV T T+L    +++L   G I  A ++   M K +       
Sbjct: 326 DEAYRILAEMENEGCKPDVITHTVL----IQVLCDAGRISDAKDVFWKMKKSDQ------ 375

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  ++  +++    +G+    + ++  M   G   NV  Y  +ID LC
Sbjct: 376 ----------KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALC 425

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R+ E+ E+  EM++ G  P  ++ NS+     +      AL L + M + G +P   
Sbjct: 426 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGY 485

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            + L I    K G++++A +    M  +G +PD+V  +A + GL    R+ +A  +F ++
Sbjct: 486 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 545

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y ++I    KA +  EA  +F +MI    +P V   N LI+   K+G  
Sbjct: 546 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRG 605

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A     ++ E     P   TY TL+ GL   G+  + + L  EM      PN IT+  
Sbjct: 606 DEAWQIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++  LCK      AL     M  KG  PD+  +  +I   + E     AF +  +M
Sbjct: 665 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 720



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 219/512 (42%), Gaps = 36/512 (7%)

Query: 36   LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-----LVEMRL 89
            ++ CL   G V +A +ML+    +   C+P+  SYN ++  L K    +       +M+ 
Sbjct: 665  ILDCLCKNGAVNDALDMLYSMTTKG--CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK 722

Query: 90   KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSK 147
              + DY       TL  +L  +   G   +AL +  E         D      L+    K
Sbjct: 723  VLIPDYA------TLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                +K+ E  E +    I L++   C LI    K+ +  +A +L  K    G +     
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIW 264
            Y+ +I GL     +++A  L++EMK  G  PD E    L+     +    E  L V+E  
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPD-EFTYNLLLDAMGKSMRIEEMLKVQEEM 895

Query: 265  EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              +   +  +  N+I+  LV +  ++QA +L   ++                    SP  
Sbjct: 896  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ----------------GFSPTP 939

Query: 325  SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             ++  +++ LLK G+++ A +LF EM + GC  N  +YN L++G   +   E+   L ++
Sbjct: 940  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999

Query: 385  MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
            M + G  P   +   +   LC+   +   L   R++   G EP +    LLI  L K  +
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059

Query: 445  AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              EA     +M ++G +P++  Y++ I  L    +   A +++ ++   G  P+V  YN 
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1119

Query: 505  IISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            +I G   +     A   +  MI  G +P+ +T
Sbjct: 1120 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 6/350 (1%)

Query: 306 ADVGVEMLMIFKGT-----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           AD   E L  F+       V   T+S + +++ +   G++     +F  M +     NV 
Sbjct: 146 ADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVG 205

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +  +  GL     L  +   L  M+E+G     +T N +   L +      AL + + M
Sbjct: 206 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVM 265

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            V G  P V+  ++L+    K          L +M   G  P++  Y+  I  L   +R 
Sbjct: 266 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRF 325

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D A  +  ++   GC PDV+ + ++I  LC A R+++A+D+F +M      P   TY  L
Sbjct: 326 DEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 385

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++ +  +G   Q+++ +   ++ +  + +V+ YT +ID LC  GR  +A+ +++EM++KG
Sbjct: 386 LDKFADNGE-SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 444

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             P + ++ +LI+G  K DR   AL  F+ M   G KP+ +  V  I+ +
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYY 494


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 289/644 (44%), Gaps = 59/644 (9%)

Query: 2   ASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF----LIRCLGSVGLVEEANMLFDQVK 57
           A IL   R+    RV   + + S CF   G++G     L+R       + E +  F  ++
Sbjct: 156 ACILRMVRKSGVSRVKVVESLISTCFYF-GSVGLIYDLLVRTYVQAKKLREGSEAFQILR 214

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+G+ V  N + N LL  L ++  VDL      E+   G   + YTL  ++   C   +F
Sbjct: 215 RKGVSVSIN-ACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKF 273

Query: 118 DKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           +  +   +++   G + D   ++ L+ A+ + G V++A +L+       +     T+  +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           ++G  K  + D+A  +  +M + G   +AA Y+ ++  +C+   +  A +++ EM   G+
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD    S LI                                  +L  NG + QA    
Sbjct: 394 LPDLVSFSSLIG---------------------------------VLARNGHLYQALMHF 420

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +                  + P+   + I+I+   ++G L  AL +  EM   GC 
Sbjct: 421 REMERS----------------GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF 464

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN  ++GLC      ++  L  EM E G  P  +T  ++ R  C+  ++  ALNL
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524

Query: 417 VRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
              M     +P  V +NTL I   CK G+   A     DM+++  +PD + Y   + G  
Sbjct: 525 FEAMVRTNLKPDKVTYNTL-IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               +  AL L   +   G  P++V  N +I G C++  + +A +  ++MI+ G+IP   
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN LI+G+ K  N+++A + ++ M EK     ++ITY  +++G C  G+  +A  +  +
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEM-EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           M E G  P+  T+ +LI G    D  + A      M ++G+ PD
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 249/516 (48%), Gaps = 30/516 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+ G V+   VD A +++ ++ + G   +    ++++  LCK+++ E  +   S+M+G G
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSI 289
           +  D    + LI +   EG    LV+E ++       R +    L  N+I+  L   G  
Sbjct: 288 VFADIVTYNTLINAYCREG----LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343

Query: 290 DQAYNLLQAMIKG--EPIA-------------DVGVEMLMIF----KGTVSPNTSSFDII 330
           D+A ++L  M++    P A             D  +E   IF    +  V P+  SF  +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I  L ++G L  AL  FREM + G + +  +Y  LIDG C +  L ++ ++  EM   G 
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                T N+    LC+++    A  L  +M  +G  P     T LI+  CK G   +A  
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALN 523

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               MV+    PD V Y+  I G      +  A EL+ D+      PD ++Y  +++G C
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            +  + EA +L ++M+ KG+ P++ T N LI G+C+SG++ +A   LS+M+      PD 
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDS 642

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            +Y TLIDG       + A +L NEME++G   N IT+  ++ G C   + + A    R 
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E G+ PD   + +LI+  +S+ N   AF    EM
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 245/505 (48%), Gaps = 26/505 (5%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS--GFASDAAMYDVIIGGLCKNKQLEMA 224
           RL+E   C+L    V+KS V + +++ + +  +   F S   +YD+++    + K+L   
Sbjct: 150 RLSEAQACIL--RMVRKSGVSR-VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG 206

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            + +  ++  G++      +KL+           LV+  W D        L   I   +V
Sbjct: 207 SEAFQILRRKGVSVSINACNKLLGG---------LVRTGWVD--------LAWEIYGEVV 249

Query: 285 SNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
             G     Y L   + A+ K     +V   +  +    V  +  +++ +IN   ++G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L    +  G    +  YN ++ GLC   + + + ++L EM + G  P   T N++ 
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             +CRR +++ A  +  +M  +G  P +   + LI  L ++G   +A     +M + G +
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD V Y+  I G      +  AL++  ++ A GC  DVV YN  ++GLCK +  A+A+ L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           FNEM+ +G++P   T+  LI G+CK GN+D+A+     M+ + +  PD +TY TLIDG C
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV-RTNLKPDKVTYNTLIDGFC 548

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            AG    A  LW++M  K   P+ I++  ++ G C       AL     M EKG++P++ 
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
               LI  +    + P A+E L +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 233/494 (47%), Gaps = 19/494 (3%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +L+  +V+  ++ +  + F  + + G +      + ++GGL +   +++A ++Y E+   
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 235 GITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           GI  +   L+ ++ + C D   E  +      E + V    +  N+++      G +++A
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + LL +       +  G+E          P   +++ I+  L K GK D A  +  EM Q
Sbjct: 312 FQLLNS------FSSRGME----------PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQ 355

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
           +G   N   YN L+  +C  + + E+ E+  EM   G  P   + +S+   L R   +  
Sbjct: 356 LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           AL   R+M   G  P     T+LI   C++G   +A +   +M+  G   D+V Y+  + 
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL   K    A  LF ++   G  PD   +  +I G CK   + +A +LF  M+   L P
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
              TYN LI+G+CK+G + +A      M+ K+   PD I+Y T+++G C +G   +A+ L
Sbjct: 536 DKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI-IPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            ++M EKG  PN +T   LI G C+      A  +   M   G+ PD F +  LI  +L 
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 653 ELNPPLAFEVLKEM 666
           E N   AF ++ EM
Sbjct: 655 EANLEKAFILINEM 668



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 211/501 (42%), Gaps = 20/501 (3%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L + R+   +     D+     F        LI      GLVEEA  L +     G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  P   +YN +L  LCK    D  +  L EM   G   +  T   LL   C      +A
Sbjct: 323 M-EPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+E+   G + + V FS L+   ++ G + +A      M+   I  +   + +LI G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   +  AL++ D+M   G   D   Y+  + GLCK K    A  L++EM   G+ PD
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 240 FEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           F   + LI     +G +   L + E     ++    +  N+++      G + +A  L  
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI+ + I                P+  S+  ++N     G L  AL+L  +M + G   
Sbjct: 562 DMIRKDII----------------PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N+   N LI G C S  + ++YE L +M  +G  P  F+ N++     +  ++  A  L+
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILI 665

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M  +G +  +    L++   C  GK  EA + L  M++ G  PD   YS+ I G +  
Sbjct: 666 NEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQ 725

Query: 478 KRVDLALELFRDICAHGCCPD 498
             +  A     ++   G  PD
Sbjct: 726 DNMKEAFRFHDEMLQRGLVPD 746


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 277/621 (44%), Gaps = 26/621 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           + Y+     L  SC+VD+  +  ++          + L+ L++    + +F+K   VF  
Sbjct: 156 HVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVK----ANEFEKCCEVFRV 211

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           + +    D   F+ ++ A  K G+++ A EL  +M+   I  N  T+  +I+G  +  R+
Sbjct: 212 MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 271

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A +L +KMT  G   +   Y  +I GL K    +    +  EM G+G  P+  + + L
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331

Query: 247 ITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG-- 302
           I      G  E  L +K++   +++   ++   S+M+    +  I+ A N L+ ++    
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391

Query: 303 --EPIADVGV-----------EMLMIFKGTVSPNTSSFDIIINTLL----KDGKLDLALS 345
              P     V                 K  +S N    D+++  L+    KDGK   A  
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 451

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+  + + G   +    N LI GLC + +L E+  +++EM E G      T N++    C
Sbjct: 452 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFC 511

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               V G   L  +M  +G +P +     L++ LC  GK  +A +   +    G + +I 
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y   + G     R++    LF ++ +     + + YNIII   C+   VA A  L   M
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            +KG++P+ ATY+ LI+G C  G ++ A   +  M  KE   P+V+ YT LI G C  G+
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEM-RKEGFVPNVVCYTALIGGYCKLGQ 690

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D A   W EM      PN+ T+  +I G CK      A      MKE G+ PD+  +  
Sbjct: 691 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 750

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           L + F    +   AF+V  +M
Sbjct: 751 LTNGFCKANDMDNAFKVCDQM 771



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 271/576 (47%), Gaps = 30/576 (5%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P    F  +I  L   G +E A  LF ++++ G+  PN  +YNC++  LC++  +D    
Sbjct: 218 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGIS-PNVVTYNCIINGLCQNGRLDNAFE 276

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFS 146
             ++M   G   +  T   L+        FDK   + +E+I  G+  +  VF+ L+  + 
Sbjct: 277 LKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYC 336

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G ++ A ++ + M   NI     T   L+ GF K  +++ A    +++  SG +    
Sbjct: 337 KMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD 396

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE- 265
               ++  LCK  +   A +    M      P   +L+ L+     +G+  L   E+W  
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK-HLEATELWFR 455

Query: 266 --DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMI------- 315
             ++      +  N+++  L   G + +A  +++ M+ +G P+  +    L++       
Sbjct: 456 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515

Query: 316 -----------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       K  + P+  +++ ++  L   GKLD A+ L+ E    G + N+  Y  
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +++G C +NR+E+   L  E+     +      N + +  C+  +V  AL L+  M+ +G
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 635

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P     + LI  +C  G   +A   + +M +EGF+P++VCY+A IGG   + ++D A 
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 695

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
             + ++ +    P+   Y ++I G CK   + +A +L  +M   G++P V TYN+L NG+
Sbjct: 696 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 755

Query: 545 CKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDG 579
           CK+ ++D A     +M  +  G P D ITYTTL+ G
Sbjct: 756 CKANDMDNAFKVCDQMATE--GLPVDEITYTTLVHG 789


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 252/551 (45%), Gaps = 52/551 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV-DKACELIERMDDCNIRLNEKTFCV 175
           D AL+ FN ++    +   + F+ LL A  K G+  D    L ++M+   +  N  T  +
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
            ++ F +  RVD    +  K+ K G       +  +I GLCK  +   A++L+ +M   G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                             V T   + N + +I    G    A  L
Sbjct: 194 CQPD-----------------------------VYTYNTIINGLCKI----GETAAAAGL 220

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ M       + G +          PN  ++  +I++L +D  ++ AL +F  M   G 
Sbjct: 221 LKKM------EEAGCQ----------PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGI 264

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F Y +LI GLC  +R +E+  LL EM      P   T N +    C+   V  AL 
Sbjct: 265 SPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALG 324

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +++ M   G EP V   + L+         +EA +    M+ +G  P+I  Y+  I G  
Sbjct: 325 VLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYC 384

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             KR+D A++LF ++   G  P+ V+YN +I G C+  ++ EA+DLF  M T G +P + 
Sbjct: 385 KAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLF 444

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L++G+CK G + +A   L R ++     P+++ YT L+  +C +G   DA  L++E
Sbjct: 445 TYSILLDGFCKQGYLGKAFR-LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  +G  P+   +  +I GLCK      AL  FR M+  G  PD   +  +I   L   +
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKD 563

Query: 656 PPLAFEVLKEM 666
              A  ++ EM
Sbjct: 564 ESRALLLVGEM 574



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 229/472 (48%), Gaps = 15/472 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN Y+ +  +   C+   VDL    L ++   G      T T L+   C  G+F +A+ +
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F++++  G   D + ++ ++    K GE   A  L+++M++   + N  T+  LI    +
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V++AL +F  M   G + D   Y  +I GLCK  + + A  L +EM    I PD   
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + L+ +   EG+++  +  +       TMT +   +   +V+  S+   Y+L   +++ 
Sbjct: 306 FNVLVDTFCKEGKVSEALGVL------KTMTEM--GVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             +  V     MI KG   PN  S++I+IN   K  ++D A+ LF EM   G   N   Y
Sbjct: 358 RKLFHV-----MITKG-CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSY 411

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI G C   +L E+ +L R M  +G  P  FT + +    C++  +  A  L R M+ 
Sbjct: 412 NTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
              +P +   T+L+  +CK G   +A +  +++  +G  P +  Y+  I GL     +D 
Sbjct: 472 TYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDE 531

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           ALE FR++ A GC PD ++YN+II GL + +  + A  L  EM  +G I  V
Sbjct: 532 ALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 235/522 (45%), Gaps = 57/522 (10%)

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
           D+V    K+M+  G   + YTL+  +  +C   + D   SV  ++I  G     V F+ L
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +    K GE  +A EL + M     + +  T+  +I+G  K      A  L  KM ++G 
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   Y  +I  LC+++ +  AL ++S MK  GI+PD    + LI          L   
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG--------LCKF 281

Query: 262 EIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
             W++    +N MT L                                            
Sbjct: 282 SRWKEASALLNEMTSL-------------------------------------------N 298

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + P+  +F+++++T  K+GK+  AL + + MT++G   NV  Y++L+ G      + E+ 
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTLLIKE 438
           +L   M   G KP  F+ N +    C+ + +  A+ L  +M  QG  P  V +NTL I  
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL-IHG 417

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C+ GK  EA     +M   G LPD+  YS  + G      +  A  LFR + +    P+
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V Y I++  +CK+    +A  LF+E+  +GL P V  Y  +ING CK G +D+A+    
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAF- 536

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           R +E +   PD I+Y  +I GL        A++L  EM ++G
Sbjct: 537 RNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%)

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           + + +A   FN M+ +  +P +  +  L++   K G     ++ LS+ +E    SP++ T
Sbjct: 71  RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
            +  ++  C   R D    +  ++ + G  P  +TF  LI GLCK      A+  F  M 
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            KG +PD++ +  +I+          A  +LK+M
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 160/599 (26%), Positives = 281/599 (46%), Gaps = 29/599 (4%)

Query: 62  CVPNNYSYNCLLEALCKSC----SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           C PN  SYN LL+  C       +++L+ M + + Q      +  +   ++  +   GQ 
Sbjct: 162 CTPNVVSYNTLLKGFCDENRAEEALELLHM-MADGQVRSCPPNLVSYNTVINGFFTEGQV 220

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           DKA ++F ++ D G     V ++I++    K   VD+A  + ++M D  +R N  T+  L
Sbjct: 221 DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           IHG++   +  + +++  +M+  G   D   Y +++  LCK  +   A +L+  M   GI
Sbjct: 281 IHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI 340

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD  I   ++   + +G L+ +                 +S + ++V NG     Y   
Sbjct: 341 KPDVSIYGIILHGYATKGALSEM-----------------HSFLDLMVGNGISPNHYIFN 383

Query: 297 QAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
                    A +G E + IF    +  +SPN  ++  +I+ L K G++D A   F +M  
Sbjct: 384 IVFCAFAKKAMIG-EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   N+ ++ +L+ GLC  ++ E++ EL  EM   G  P     N++   LC    V+ 
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK 502

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L+  M   G  P +     LI+  C  GK  EA + L  M+  G  P+   Y+  + 
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLH 562

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G     R+D A  +F+++ ++G  P VV YN I+ GL K +R +EA++L+  MIT G   
Sbjct: 563 GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQW 622

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           S+ TYN+++NG  K+  +D+A+     +  K+    D+IT+  +I  L   GR +DA+ L
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL-QVDIITFNIMIGALLKDGRKEDAMNL 681

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +  +   G  P+  T+  +   L +          F  M++ G  P+  +   L+   L
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/631 (25%), Positives = 276/631 (43%), Gaps = 91/631 (14%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP-LLQVYCNSGQFDKALS 122
           P+ ++Y+ L+   C+   ++        +   GW  +   +   LL+  C++ +  +A+ 
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRL---NEKTFCVLI 177
           V    +       +V  ++ LL  F      ++A EL+  M D  +R    N  ++  +I
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +GF  + +VDKA  LF  MT  G   +   Y ++I GLCK + ++ A  ++ +M   G+ 
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P+    + LI      G+        W++            ++R+L              
Sbjct: 272 PNIVTYTCLIHGYLSIGQ--------WKE------------VVRML-------------- 297

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                + ++  G+E          P+  ++ ++++ L K GK   A  LF  M + G   
Sbjct: 298 -----KEMSAHGLE----------PDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP 342

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V +Y  ++ G      L E +  L  M  +G  P H+  N +F    ++  +  A+++ 
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KMR QG  P V +   LI  LCK G+  +A      M+ EG  P+IV +++ + GL  I
Sbjct: 403 NKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTI 462

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLC------KAQRVA--------------- 516
            + + A ELF ++   G  P+VV +N I+  LC      KAQR+                
Sbjct: 463 DKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISY 522

Query: 517 --------------EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                         EA  L + M++ GL P+  TYN L++G+C+ G ID A      ML 
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
               +P V+TY T++ GL    R  +A  L+  M   G   +  T+  ++ GL K +   
Sbjct: 583 N-GITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVD 641

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            AL  F+ +  K ++ D+  F  +I A L +
Sbjct: 642 EALKMFQSLCSKDLQVDIITFNIMIGALLKD 672



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 235/530 (44%), Gaps = 36/530 (6%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F Q+  +G+  PN  +Y CL+           V   LKEM  +G   D +T 
Sbjct: 254 VVDRAEGVFQQMIDKGV-RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTY 312

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C  G+  +A  +F+ +I  G   D  ++ I+L  ++  G + +    ++ M  
Sbjct: 313 GLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVG 372

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  N   F ++   F KK+ + +A+ +F+KM + G + +   Y  +I  LCK  +++ 
Sbjct: 373 NGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDD 432

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE----------DRDVNTMT 273
           A   +++M   G+ P+  + + L+          L   + WE          ++ ++   
Sbjct: 433 AELKFNQMINEGVAPNIVVFTSLVYG--------LCTIDKWEKAGELFFEMVNQGIHPNV 484

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N+IM  L + G + +A  L+  M +      VG            P+  S++ +I  
Sbjct: 485 VFFNTIMCNLCTEGRVMKAQRLIDLMER------VGTR----------PDIISYNALIRG 528

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               GK D A  L   M  +G   N   YN L+ G C   R++++Y + +EM  +G  P 
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPV 588

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++   L + +    A  L   M   G +  +    +++  L K+    EA +   
Sbjct: 589 VVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQ 648

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +  +    DI+ ++  IG L+   R + A+ LF  I A+G  PDV  Y +I   L +  
Sbjct: 649 SLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEG 708

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            + E + +F+EM   G  P+    N L+      G+I +A   LS++ EK
Sbjct: 709 SLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEK 758



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 223/502 (44%), Gaps = 24/502 (4%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV-IIGGLCKNKQLEMALQ-LYS 229
           T+ +L+  F +  R++     F  + K+G+  +  +    ++ GLC  K++  A+  L  
Sbjct: 96  TYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLR 155

Query: 230 EMKGSGITPDFEILSKLITSCSDE--GELTLLVKEIWEDRDVNTMT---LLCNSIMRILV 284
            M   G TP+    + L+    DE   E  L +  +  D  V +     +  N+++    
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF 215

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           + G +D+AYNL   M       D G+           PN  ++ I+I+ L K   +D A 
Sbjct: 216 TEGQVDKAYNLFLDM------TDQGI----------PPNVVTYTIVIDGLCKAQVVDRAE 259

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F++M   G   N+  Y  LI G  +  + +E   +L+EM   G +P  FT   +   L
Sbjct: 260 GVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYL 319

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C++     A  L   M  +G +P V    +++      G   E   FL  MV  G  P+ 
Sbjct: 320 CKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNH 379

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             ++           +  A+++F  +   G  P+VV Y  +I  LCK  RV +AE  FN+
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQ 439

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           MI +G+ P++  +  L+ G C     ++A      M+  +   P+V+ + T++  LC  G
Sbjct: 440 MINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMV-NQGIHPNVVFFNTIMCNLCTEG 498

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R   A  L + ME  G  P+ I++ ALI G C   +   A     +M   G+KP+   + 
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L+  +  +     A+ V +EM
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEM 580



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 57/434 (13%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  LI  L  +G V++A + F+Q+  EG+  PN   +  L+  LC     +  
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV-APNIVVFTSLVYGLCTIDKWEKA 468

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
                EM + G   +      ++   C  G+  KA  + + +   G   + + ++ L+  
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G+ D+A +L++ M    ++ NE T+  L+HG+ +  R+D A  +F +M  +G    
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPV 588

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y+ I+ GL K ++   A +LY  M  SG                          + W
Sbjct: 589 VVTYNTILHGLFKTRRFSEAKELYLNMITSG--------------------------KQW 622

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
               + T  ++ N + +    N  +D+A  + Q++       D+ V+++           
Sbjct: 623 S---IYTYNIILNGLSK----NNCVDEALKMFQSLCS----KDLQVDII----------- 660

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F+I+I  LLKDG+ + A++LF  ++  G + +V  Y  + + L     LEE   +  E
Sbjct: 661 -TFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSE 719

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK--- 441
           ME+SG  P    LN + R L  R D+  A   + K+  +         ++LI    +   
Sbjct: 720 MEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEH 779

Query: 442 HGKAM-EAFRFLTD 454
             K++ E + FL +
Sbjct: 780 QAKSLPEKYHFLNE 793


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 261/558 (46%), Gaps = 59/558 (10%)

Query: 115 GQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G  + A  ++ EI   G  V+ +  +I++ A  K G+++K    +  + +  +  +  T+
Sbjct: 204 GWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTY 263

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI  +  +  +++A +L   M   GF+     Y+ +I GLCK+ + E A ++++EM  
Sbjct: 264 NTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 323

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSID 290
           SG++PD      L+     +G+  +  + I+ D   RDV    +  +S+M +   +G++D
Sbjct: 324 SGLSPDSTTYRSLLMEACKKGD-AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A     ++ +   I                P+   + I+I    + G +  A++L  EM
Sbjct: 383 KALMYFNSVKEAGLI----------------PDNVIYTILIQGYCRKGMISEAMNLRNEM 426

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q GC  +V  YN ++ GLC    L E+ +L  EM E G  P  +TL             
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL------------- 473

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                                 T+LI   CK G    A      M ++    D+V Y+  
Sbjct: 474 ----------------------TILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + G   +  +D A E++ D+ +    P  ++++I+++ LC    ++EA  +++EMI+K +
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V   N +I G+C+SGN     + L +M+  E   PD I+Y TLI G         A 
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMIS-EGFVPDCISYNTLIYGFVKEENMSKAF 630

Query: 591 MLWNEMEEK--GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  +MEEK  G  P+  T+ +++ G C+ ++ + A    R M E+G+ PD   + +LI+
Sbjct: 631 GLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690

Query: 649 AFLSELNPPLAFEVLKEM 666
            F+S+ N   AF    EM
Sbjct: 691 GFVSQDNLTEAFRFHDEM 708



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 236/555 (42%), Gaps = 69/555 (12%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKAC 155
           + +   +L+ ++ +   SG+   A S    +I    V    + + L+  +S  G      
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGS----- 153

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
                        N+  F +LI  FV+  ++ +A + F  +   G+       + +IG L
Sbjct: 154 -------------NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSL 200

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
            +   +E+A ++Y E+  SG+                                VN  TL 
Sbjct: 201 VRIGWVELAWRIYQEISRSGV-------------------------------GVNVYTL- 228

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            N ++  L  +G +++                VG  +  + +  V P+  +++ +I+   
Sbjct: 229 -NIMVNALCKDGKMEK----------------VGTFLSEVQEKGVYPDIVTYNTLISAYS 271

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G ++ A  L   M   G    V+ YN +I+GLC   + E + E+  EM  SG  P   
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  S+    C++ D V   N+   MR +   P +   + ++    + G   +A  +   +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            + G +PD V Y+  I G      +  A+ L  ++   GC  DVV YN I+ GLCK + +
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA+ LFNEM  +GL P   T  +LI+G CK GN+  AM    +M EK     DV+TY T
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI-KLDVVTYNT 510

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+DG    G  D A  +W +M  K   P  I+F  L+  LC       A   +  M  K 
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKS 570

Query: 636 MKPDMFVFVALISAF 650
           +KP + +  ++I  +
Sbjct: 571 IKPTVMICNSMIKGY 585



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 194/396 (48%), Gaps = 4/396 (1%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG-VEMLMIFKGTVSPNTSSFDIII 331
           +L  ++++ ILV +G +  A + +  MI+   ++ V  V  L+        N S FD++I
Sbjct: 103 SLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLI 162

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            T ++  KL  A   F  +   G   ++   N LI  L     +E ++ + +E+  SG  
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
              +TLN M   LC+   +      + +++ +G  P +     LI      G   EAF  
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +  M  +GF P +  Y+  I GL    + + A E+F ++   G  PD   Y  ++   CK
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDV 570
                E E++F++M ++ ++P +  ++ +++ + +SGN+D+A++  + +  KE+G  PD 
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV--KEAGLIPDN 400

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           + YT LI G C  G   +A+ L NEM ++GCA + +T+  ++ GLCK      A   F  
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E+G+ PD +    LI       N   A E+ K+M
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 201/443 (45%), Gaps = 26/443 (5%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SPG   +  +I  L   G  E A  +F ++ R GL  P++ +Y  LL   CK       E
Sbjct: 292 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACKKGDAVETE 350

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAF 145
               +M+      D    + ++ ++  SG  DKAL  FN + + G + D  +++IL+  +
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            + G + +A  L   M      ++  T+  ++HG  K+  + +A +LF++MT+ G   D+
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
               ++I G CK   L+ A++L+ +MK   I  D    + L+      G++    KEIW 
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDID-TAKEIWA 529

Query: 266 D---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           D   +++    +  + ++  L S G + +A+ +   MI       V +   MI     S 
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N S  +I +  ++ +G +   +S                YN LI G      + +++ L+
Sbjct: 590 NASDGEIFLEKMISEGFVPDCIS----------------YNTLIYGFVKEENMSKAFGLV 633

Query: 383 REMEE--SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           ++MEE   G  P  FT NS+    CR   +  A  ++RKM  +G  P     T LI    
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693

Query: 441 KHGKAMEAFRFLTDMVQEGFLPD 463
                 EAFRF  +M+Q GF PD
Sbjct: 694 SQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 217/542 (40%), Gaps = 100/542 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G VE A  ++ ++ R G+ V N Y+ N ++ ALCK   ++ V   L E+Q+ 
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGV-NVYTLNIMVNALCKDGKMEKVGTFLSEVQEK 254

Query: 96  GWGYDKYTLTPLLQVY-----------------------------------CNSGQFDKA 120
           G   D  T   L+  Y                                   C  G++++A
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314

Query: 121 LSVFNEIIDHGWV---------------------DEHVF---------------SILLVA 144
             VF E++  G                        E++F               S ++  
Sbjct: 315 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSL 374

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F++ G +DKA      + +  +  +   + +LI G+ +K  + +A+ L ++M + G A D
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMD 434

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVK 261
              Y+ I+ GLCK K L  A +L++EM   G+ PD   L+ LI      G L     L K
Sbjct: 435 VVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFK 494

Query: 262 EIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           ++ E R   DV T   L +   ++    G ID A  +   M+  E               
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKV----GDIDTAKEIWADMVSKE--------------- 535

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P   SF I++N L   G L  A  ++ EM        V + N++I G C S    + 
Sbjct: 536 -ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG 594

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ--GHEPWVKHNTLLI 436
              L +M   GF P   + N++     + +++  A  LV+KM  +  G  P V     ++
Sbjct: 595 EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSIL 654

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              C+  +  EA   L  M++ G  PD   Y++ I G +    +  A     ++   G  
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714

Query: 497 PD 498
           PD
Sbjct: 715 PD 716



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 10/292 (3%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++++  C M       ++  L    ++ EA+ LF+++   GL  P++Y+   L++  
Sbjct: 422 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL-FPDSYTLTILIDGH 480

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK  ++       K+M++     D  T   LL  +   G  D A  ++ +++    +   
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + FSIL+ A    G + +A  + + M   +I+        +I G+ +           +K
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFEILSKLITSCSDE 253
           M   GF  D   Y+ +I G  K + +  A  L  +M  K  G+ PD    + ++     E
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660

Query: 254 GEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            ++     +L K I  +R VN       S++   VS  ++ +A+     M++
Sbjct: 661 NQMKEAEAVLRKMI--ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 10/115 (8%)

Query: 34  GFLIRCLGS----VGLVEEANM--LFDQVKR----EGLCVPNNYSYNCLLEALCKSCSVD 83
           GF+  C+       G V+E NM   F  VK+    +G  VP+ ++YN +L   C+   + 
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
             E  L++M + G   D+ T T L+  + +     +A    +E++  G+  +  F
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 261/569 (45%), Gaps = 67/569 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  +YN +L AL  + S+         M   G   + YT   L++  C  G   +ALS
Sbjct: 153 VPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  ++   G     V ++ L+ AF + GEVD A  L+  M +  ++ N  TF  +++G  
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +++ A ++FD+M + G A D   Y+ ++GG CK      AL +++EM   GI PD  
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI                                  ++   G++++A  L++ M  
Sbjct: 332 TFTSLI---------------------------------HVMCKAGNLERAVTLVRQM-- 356

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                + G++M          N  +F  +I+   K G LD AL   R M Q     +V  
Sbjct: 357 ----RERGLQM----------NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVC 402

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+G C   R++E+ ELL EME  G KP   T +++    C+  D   A  L ++M 
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G  P     + LI+ LC   +  +A     +M++ G  PD   Y++ I G      V+
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL L   +   G  PDVV Y+++I+GL K+ R  EA+ L  ++  +  IP+   Y+ L+
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582

Query: 542 N---------------GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           +               G+C  G +++A      ML++ + + D   Y+ LI G C AG  
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR-NWNLDGSVYSVLIHGHCRAGNV 641

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGL 615
             A+    +M + G APN  + ++LI GL
Sbjct: 642 MKALSFHKQMLQGGFAPNSTSTISLIRGL 670



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 177/346 (51%), Gaps = 4/346 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +++ ++   L D  L  A   F  M   G   NV+ YN L+  LC     +E+  +
Sbjct: 154 PSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           LR+M  +G  P   T N++     R  +V GA  LV  MR  G +P +     ++  +CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  +A +   +MV+EG  PD V Y+  +GG         AL +F ++   G  PDVV 
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I  +CKA  +  A  L  +M  +GL  +  T+  LI+G+CK G +D A+L + R +
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV-RGM 391

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK-CDR 620
           ++    P V+ Y  LI+G C+ GR D+A  L +EME KG  P+ +T+  +I+  CK CD 
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A  ++ +M+ EKG+ PD   + +LI     E     A  + K M
Sbjct: 452 HSAFELNQQML-EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 249/552 (45%), Gaps = 42/552 (7%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           ++  R  R   L +L +D+  + C  +      L+      G V+ A  L   + REG  
Sbjct: 199 ALCGRGHRKEALSIL-RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM-REGGL 256

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  ++N ++  +CK+  ++       EM   G   D  +   L+  YC +G   +ALS
Sbjct: 257 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALS 316

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           VF E+   G + + V F+ L+    K G +++A  L+ +M +  +++NE TF  LI GF 
Sbjct: 317 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFC 376

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           KK  +D AL     M +         Y+ +I G C   +++ A +L  EM+  G+ PD  
Sbjct: 377 KKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 436

Query: 242 ILSKLITS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             S +I++    C       L   +   ++ V    +  +S++R+L     +  A+ L +
Sbjct: 437 TYSTIISAYCKNCDTHSAFEL--NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFK 494

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MIK      +G++          P+  ++  +I+   K+G ++ ALSL  +M + G + 
Sbjct: 495 NMIK------LGLQ----------PDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  Y+ LI+GL  S R  E+ +LL ++      P +   +++  C CR+ ++   L L+
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC-CRKAELKSVLALL 597

Query: 418 RKMRVQG--------HEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           +   ++G        ++  +  N        ++LI   C+ G  M+A  F   M+Q GF 
Sbjct: 598 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFA 657

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+     + I GL +   V  A ++ + +  +    D  A   +I        V    D+
Sbjct: 658 PNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDV 717

Query: 522 FNEMITKGLIPS 533
            + M   GL+PS
Sbjct: 718 LHGMAKDGLLPS 729



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 35/207 (16%)

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P V+AYN ++  L  A  +  A   F+ M++ G+ P+V TYN+L+   C  G+  +A
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 554 MLCLSRM---------------------------------LEKESG-SPDVITYTTLIDG 579
           +  L  M                                 + +E G  P+++T+ ++++G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +C AG+ +DA  +++EM  +G AP+ +++  L+ G CK      AL  F  M +KG+ PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  F +LI       N   A  ++++M
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQM 356


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 249/551 (45%), Gaps = 51/551 (9%)

Query: 117 FDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            D ALS FN ++  H       F+ LL + +K         L  +MD   +  N  T  +
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F   +RV  A  +  K+ K G   D   +  +I GLC   ++  AL L+ +M   G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             P+                             V T   L N + ++    G+   A  L
Sbjct: 157 FQPN-----------------------------VVTYGTLINGLCKV----GNTSAAIRL 183

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M +G                   P+   +  II++L KD ++  A +LF +M   G 
Sbjct: 184 LRSMEQG----------------NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 227

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F Y +L+  LCN    +    LL +M  S   P     +++   LC+   V  A  
Sbjct: 228 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 287

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +V  M  +G EP V   T L+   C   +  EA +    MV++GF PD++ Y+  I G  
Sbjct: 288 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 347

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I ++D A+ LF ++C     PD   YN ++ GLC   R+ +A  LF+EM+ +G +P + 
Sbjct: 348 KIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLV 407

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L++  CK+ ++++AM  L + +E  + +PD+  Y  +IDG+C AG  + A  L++ 
Sbjct: 408 TYSILLDSLCKNCHLEEAMALL-KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  KG  P+  T+  +I GLCK      A   F  M      PD   +  +   FL    
Sbjct: 467 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526

Query: 656 PPLAFEVLKEM 666
              A ++L+EM
Sbjct: 527 TLRAIQLLEEM 537



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 244/525 (46%), Gaps = 22/525 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M D   + N  T+  LI+G  K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     D  +Y  II  LCK++Q+  A  L+S+M G GI+PD   
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + L+ +  +  E   +T L+ ++   + +  + +  ++++  L   G + +A+ ++  M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF-STVVDALCKEGKVTEAHEIVDMM 292

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+       GVE          P+  ++  +++      ++D A+ +F  M + G   +V
Sbjct: 293 IQR------GVE----------PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LI+G C  ++++++  L  EM    + P   T N++   LC    +  A+ L  +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G  P +   ++L+  LCK+    EA   L  +      PDI  Y+  I G+     
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A +LF ++ + G  P V  YNI+I GLCK   + EA  LF EM      P   TYN 
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 516

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +  G+ ++    +A+  L  ML +   S DV T T L++ L   G
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLAR-GFSADVSTTTLLVEMLSDDG 560



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 197/417 (47%), Gaps = 28/417 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        +M 
Sbjct: 165 GTLINGLCKVGNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T T L+   CN  ++    ++ N++++   + D  +FS ++ A  K G+V 
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A E+++ M    +  +  T+  L+ G   +S +D+A+++FD M + GFA D   Y  +I
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------D 266
            G CK  +++ A+ L+ EM      PD +  + L+      G L   +    E       
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            D+ T ++L +S    L  N  +++A  LL+A                I    ++P+   
Sbjct: 404 PDLVTYSILLDS----LCKNCHLEEAMALLKA----------------IEASNLNPDIQV 443

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++III+ + + G+L+ A  LF  ++  G   +V+ YN +I GLC    L E+ +L  EM+
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            +   P   T N++ R   +  + + A+ L+ +M  +G    V   TLL++ L   G
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 46/324 (14%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L D L + NRL   +            P+      +   + + +     L+L  +M 
Sbjct: 34  FNTLDDALSSFNRLLHMHP----------PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMD 83

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P V    +LI   C   +   AF  L  +++ G  PD   ++  I GL    ++ 
Sbjct: 84  SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG 143

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKA----------------------------- 512
            AL LF  +   G  P+VV Y  +I+GLCK                              
Sbjct: 144 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 203

Query: 513 ------QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
                 ++V EA +LF++M+ +G+ P + TY  L++  C           L++M+  +  
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI- 262

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PDV+ ++T++D LC  G+  +A  + + M ++G  P+ +T+  L+ G C       A+ 
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F MM  KG  PD+  +  LI+ +
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGY 346


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 271/591 (45%), Gaps = 26/591 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  ++E L + C +D+V+  L++M+  G    +     ++  Y   G  ++AL +F  I
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            + G      +++ LL A     +      L   M    +  N  T+ +L+    K  RV
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A +LF +M+  G   DA  Y  ++  LCK  +++ A +L    K     P   + + L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNAL 250

Query: 247 ITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           I     EG + + +K + E  D  V+   +  + I+  L  +G+++ A+ L   M     
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM----- 305

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                      F      N  +F  +I      GKL  AL L++ M Q GC  NV  YN 
Sbjct: 306 -----------FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI GLC++  LEE+ ++  +M+ SG  P   T + +     +  D+VGA     +M   G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P V   T ++  LCK+    +A   +  M  EG  P+ + ++  I GL    RV+ A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +L   +  HGC P++  YN ++  L +  +  EA  LF E+  + L P++ TYN ++ G+
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE-KGCAP 603
            ++G + +A+    + L + + +PD ITY T+I   C  G+   A  L   +   K   P
Sbjct: 535 SRAGMMGEALQLFGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           + IT+ +LI G C       A+        +G+ P+   + AL+  F   L
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 259/574 (45%), Gaps = 62/574 (10%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG  E+A  +F ++   G C P    YN LL+AL       ++      M+  G   + +
Sbjct: 122 VGSAEQALKMFYRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T   LL+  C + + D A  +F E+ + G   + V ++ ++ +  K G++D A EL  R 
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR- 239

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                + +   +  LI G  K+ R++ A++L  +M  +G   +   Y  II  LC +  +
Sbjct: 240 ----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
           E+A  L+++M   G   +    + LI  C   G+L   + ++W+           +  N+
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL-DLWKLMIQDGCEPNVVAYNT 354

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L SNGS+++A  +   M +   +                PN +++ I+I+   K G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCL----------------PNVTTYSILIDGFAKSG 398

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A   +  M   GC  NV  Y  ++D LC ++  +++  L+ +M   G  P   T N
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFN 458

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +  + LC    V  A+ L+ +M  QGH                                 
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERM--QGH--------------------------------- 483

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G LP+I  Y+  +  L  + + + A  LF++I A    P++V YN ++ G  +A  + EA
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LF + + +G  P   TYN +I+ +CK G +  A   + R+   +   PD+ITYT+LI 
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           G C     ++A+   ++   +G  PN  T+ AL+
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 232/532 (43%), Gaps = 55/532 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E +F  ++  + + G  ++A ++  R+ +   +   + +  L+   + +++      L+ 
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M K G   +   Y++++  LCKN +++ A +L+ EM   G  PD    + +++S     
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS----- 223

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                               LC +        G ID A  L                   
Sbjct: 224 --------------------LCKA--------GKIDDAREL------------------- 236

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
              G   P+   ++ +I+ + K+G++++A+ L  EM   G   NV  Y+ +I+ LC S  
Sbjct: 237 --AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E ++ L  +M   G      T   + +    R  +  AL+L + M   G EP V     
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LC +G   EA +    M + G LP++  YS  I G      +  A E +  + +HG
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P+VV Y  ++  LCK     +A  L  +M  +G  P+  T+N  I G C +G ++ AM
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L RM +     P++ TY  L+D L    + ++A  L+ E+E +   PN +T+  ++ G
Sbjct: 475 KLLERM-QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG 533

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +      AL  F     +G  PD   +  +I A+  +    +A ++++ +
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 228/492 (46%), Gaps = 27/492 (5%)

Query: 181 VKKSRVDKALQ----LFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +K+ + D+ L      F  +  S  F   A+ Y V+I  L +  +++M   +  +MK  G
Sbjct: 45  LKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDG 104

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN- 294
           I    ++   +I      G     +K  +   +       C   +RI          YN 
Sbjct: 105 INCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG-----CKPTVRI----------YNH 149

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL A++       +      + K  + PN  +++I++  L K+ ++D A  LF EM+  G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  +   Y  ++  LC + +++++ EL        FKP+    N++   +C+   +  A+
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAI 264

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+ +M   G +P V   + +I  LC  G    AF     M   G   +I  ++  I G 
Sbjct: 265 KLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGC 324

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               ++  AL+L++ +   GC P+VVAYN +I GLC    + EA  + ++M   G +P+V
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY++LI+G+ KSG++  A    +RM+      P+V+TYT ++D LC     D A  L  
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMIS-HGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M  +GC PN +TF   I GLC   R   A+     M+  G  P++  +  L+ A     
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503

Query: 655 NPPLAFEVLKEM 666
               AF + +E+
Sbjct: 504 KYEEAFGLFQEI 515



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 204/465 (43%), Gaps = 65/465 (13%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S L +A +I   R LA      R   S      LI  +   G +E A  L  ++   G
Sbjct: 220 MVSSLCKAGKIDDARELA-----GRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ-------VY-- 111
           +  PN  SY+C++ +LC S +V+L      +M   G   + +T TPL++       +Y  
Sbjct: 275 V-DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 112 --------------------------CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
                                     C++G  ++AL V +++   G + +   +SIL+  
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F+K G++  A E   RM     R N  T+  ++    K S  D+A  L +KMT  G   +
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVK 261
              ++  I GLC N ++E A++L   M+G G  P+    ++L+ +    +   E   L +
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTV 320
           EI E R++    +  N+++      G + +A  L  +A+++G                  
Sbjct: 514 EI-EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG-----------------T 555

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESY 379
           +P++ +++ +I+   K GK+ +A  L   ++ +     ++  Y +LI G CN   +EE+ 
Sbjct: 556 APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAM 615

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
             L +    G  P   T N++ RC       +G ++++  +  +G
Sbjct: 616 AFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 164/672 (24%), Positives = 314/672 (46%), Gaps = 62/672 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS  R +  +  + + +    C         +I+  G   + ++A  +F +++    C P
Sbjct: 53  LSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEP 112

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              SYN LL A  ++     VE      +  G   +  T   L+++ C   +F+KA    
Sbjct: 113 AIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           + +   G+  + VFS                                 +  +I+   K  
Sbjct: 173 DWMWKEGFKPD-VFS---------------------------------YSTVINDLAKAG 198

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEIL 243
           ++D AL+LFD+M++ G A D   Y+++I G  K K  + A++L+  + + S + P+ +  
Sbjct: 199 KLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258

Query: 244 SKLITSCSDEGELTLLVKEIWE-----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           + +I+  S  G +   +K IWE     +R+ +  T   +S++  L   G++D+A ++   
Sbjct: 259 NIMISGLSKCGRVDDCLK-IWERMKQNEREKDLYTY--SSLIHGLCDAGNVDKAESVFNE 315

Query: 299 MIKGEPIADV------------------GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           + + +   DV                   +E+  I +   S N  S++I+I  LL++GK+
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  ++R M   G   +   Y   I GLC +  + ++  +++E+E SG     +   S+
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             CLC+++ +  A NLV++M   G E        LI  L +  +  EA  FL +M + G 
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P +V Y+  I GL    +   A    +++  +G  PD+  Y+I++ GLC+ +++  A +
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L+++ +  GL   V  +N+LI+G C  G +D AM  ++ M E  + + +++TY TL++G 
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM-EHRNCTANLVTYNTLMEGF 614

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G  + A ++W  M + G  P+ I++  ++ GLC C     A+  F   +  G+ P +
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674

Query: 641 FVFVALISAFLS 652
           + +  L+ A ++
Sbjct: 675 YTWNILVRAVVN 686



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 267/606 (44%), Gaps = 52/606 (8%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  LFD   R      +   Y+ +L  L ++  V+ V   ++ ++      D+     ++
Sbjct: 26  AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNI 166
           + Y  +   D+AL VF  + +    +  +  ++ LL AF +  +  K   L    +   +
Sbjct: 86  KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N +T+ VLI    KK   +KA    D M K GF  D   Y  +I  L K  +L+ AL+
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L+ EM   G+ PD         +C +     +L+    +++D  T   L + ++      
Sbjct: 206 LFDEMSERGVAPD--------VTCYN-----ILIDGFLKEKDHKTAMELWDRLLE----- 247

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                                           +V PN  + +I+I+ L K G++D  L +
Sbjct: 248 ------------------------------DSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           +  M Q    ++++ Y++LI GLC++  ++++  +  E++E        T N+M    CR
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  +L L R M  +     V +N +LIK L ++GK  EA      M  +G+  D   
Sbjct: 338 CGKIKESLELWRIMEHKNSVNIVSYN-ILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y   I GL     V+ AL + +++ + G   DV AY  II  LCK +R+ EA +L  EM 
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G+  +    N LI G  +   + +A   L R + K    P V++Y  LI GLC AG+ 
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFL-REMGKNGCRPTVVSYNILICGLCKAGKF 515

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +A     EM E G  P+  T+  L+ GLC+  +   AL  +    + G++ D+ +   L
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575

Query: 647 ISAFLS 652
           I    S
Sbjct: 576 IHGLCS 581



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 240/586 (40%), Gaps = 92/586 (15%)

Query: 120 ALSVFNEIIDH-GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           A ++F+    H G+    V +  +L   S+   V+    ++E +     + +E     +I
Sbjct: 26  AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGSG 235
             + K S  D+AL +F +M +  F  + A+  Y+ ++    + KQ      L++  + +G
Sbjct: 86  KTYGKNSMPDQALDVFKRM-REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + P+ +  + LI     + E                                  ++A   
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEF---------------------------------EKARGF 171

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M                +K    P+  S+  +IN L K GKLD AL LF EM++ G 
Sbjct: 172 LDWM----------------WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
             +V  YN LIDG       + + EL  R +E+S   P   T N M   L +   V   L
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +  +M+    E  +   + LI  LC  G   +A     ++ +     D+V Y+  +GG 
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               ++  +LEL+R I  H    ++V+YNI+I GL +  ++ EA  ++  M  KG     
Sbjct: 336 CRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY + I+G C +G +++A L + + +E   G  DV  Y ++ID LC   R ++A  L  
Sbjct: 395 TTYGIFIHGLCVNGYVNKA-LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453

Query: 595 EMEEKG-----------------------------------CAPNRITFMALITGLCKCD 619
           EM + G                                   C P  +++  LI GLCK  
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +   A    + M E G KPD+  +  L+     +    LA E+  +
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 219/483 (45%), Gaps = 23/483 (4%)

Query: 189 ALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           A  LFD  T+  G+A  A +Y  I+  L + + +    ++   ++               
Sbjct: 26  AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ------------- 72

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIA 306
             C  + ++ L V + +    +    L     MR +       ++YN LL A ++ +   
Sbjct: 73  -ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW- 130

Query: 307 DVGVEMLMIFKGT--VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
            V VE L  +  T  V+PN  +++++I    K  + + A      M + G   +VF Y+ 
Sbjct: 131 -VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST 189

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQ 423
           +I+ L  + +L+++ EL  EM E G  P     N +     + +D   A+ L  R +   
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P VK + ++I  L K G+  +  +    M Q     D+  YS+ I GL D   VD A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             +F ++       DVV YN ++ G C+  ++ E+ +L+  M  K  + ++ +YN+LI G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKG 368

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             ++G ID+A + + R++  +  + D  TY   I GLC+ G  + A+ +  E+E  G   
Sbjct: 369 LLENGKIDEATM-IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +   + ++I  LCK  R   A    + M + G++ +  V  ALI   + +     A   L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487

Query: 664 KEM 666
           +EM
Sbjct: 488 REM 490



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 13/343 (3%)

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
           +++F  ++SP       ++  L  +     A +LF   T+  G   +  +Y++++  L  
Sbjct: 1   MVVFPKSLSPKH-----VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSE 55

Query: 372 S---NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEP 427
           +   N +    EL+R  E    K       S+ +   +      AL++ ++MR + G EP
Sbjct: 56  TRMVNHVSRIVELIRSQE---CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEP 112

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            ++    L+    +  + ++           G  P++  Y+  I      K  + A    
Sbjct: 113 AIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  PDV +Y+ +I+ L KA ++ +A +LF+EM  +G+ P V  YN+LI+G+ K 
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
            +   AM    R+LE  S  P+V T+  +I GL   GR DD + +W  M++     +  T
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + +LI GLC       A   F  + E+    D+  +  ++  F
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 21/347 (6%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  SYN L++ L ++  +D   M  + M   G+  DK T    +   C +G  +KAL V 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G  +D + ++ ++    K   +++A  L++ M    + LN      LI G ++ 
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           SR+ +A     +M K+G       Y+++I GLCK  +   A     EM  +G  PD +  
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537

Query: 244 SKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           S L+     + ++ L + E+W       + T  ++ N ++  L S G +D A  ++  M 
Sbjct: 538 SILLCGLCRDRKIDLAL-ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                A                N  +++ ++    K G  + A  ++  M ++G   ++ 
Sbjct: 597 HRNCTA----------------NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            YN ++ GLC    +  + E   +    G  PT +T N + R +  R
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 168/615 (27%), Positives = 273/615 (44%), Gaps = 71/615 (11%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    L+  L   GLV+E   ++ ++  + +C PN Y+YN ++   CK  +V+     + 
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVS 242

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGE 150
           ++ + G   D +T T L+  YC     D A  VFNE+   G                   
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG------------------- 283

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
                           R NE  +  LIHG     R+D+A+ LF KM           Y V
Sbjct: 284 ---------------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS----CSDEGELTLLVKEIWED 266
           +I  LC +++   AL L  EM+ +GI P+    + LI S    C  E    LL + + + 
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              N +T   N+++      G I+ A ++++ M   +                +SPNT +
Sbjct: 389 LMPNVITY--NALINGYCKRGMIEDAVDVVELMESRK----------------LSPNTRT 430

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I    K   +  A+ +  +M +   + +V  YN+LIDG C S   + +Y LL  M 
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G  P  +T  SM   LC+ + V  A +L   +  +G  P V   T LI   CK GK  
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA   L  M+ +  LP+ + ++A I GL    ++  A  L   +   G  P V    I+I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
             L K      A   F +M++ G  P   TY   I  +C+ G +  A   +++M  +E+G
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENG 667

Query: 567 -SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            SPD+ TY++LI G    G+ + A  +   M + GC P++ TF++LI            L
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI----------KHL 717

Query: 626 VHFRMMKEKGMKPDM 640
           +  +  K+KG +P++
Sbjct: 718 LEMKYGKQKGSEPEL 732



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/537 (28%), Positives = 256/537 (47%), Gaps = 32/537 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ LL + +++G VD+  ++   M +  +  N  T+  +++G+ K   V++A Q   K+ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS-----D 252
           ++G   D   Y  +I G C+ K L+ A ++++EM   G   +    + LI         D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 253 EGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           E  + L VK + +D     V T T+L  S    L  +    +A NL++ M       + G
Sbjct: 306 EA-MDLFVK-MKDDECFPTVRTYTVLIKS----LCGSERKSEALNLVKEM------EETG 353

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           ++          PN  ++ ++I++L    K + A  L  +M + G M NV  YN LI+G 
Sbjct: 354 IK----------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C    +E++ +++  ME     P   T N + +  C+  +V  A+ ++ KM  +   P V
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                LI   C+ G    A+R L+ M   G +PD   Y++ I  L   KRV+ A +LF  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P+VV Y  +I G CKA +V EA  +  +M++K  +P+  T+N LI+G C  G 
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           + +A L   +M+ K    P V T T LI  L   G  D A   + +M   G  P+  T+ 
Sbjct: 583 LKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             I   C+  R   A      M+E G+ PD+F + +LI  +        AF+VLK M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 262/553 (47%), Gaps = 31/553 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           LL      G  D+   V+ E++ D    + + ++ ++  + K G V++A + + ++ +  
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  +  T+  LI G+ ++  +D A ++F++M   G   +   Y  +I GLC  ++++ A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308

Query: 226 QLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWE---DRDVNTMTLLCNSI 279
            L+ +MK     P     + LI S C  E   E   LVKE+ E     +++T T+L +S 
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS- 367

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
              L S    ++A  LL  M++               KG + PN  +++ +IN   K G 
Sbjct: 368 ---LCSQCKFEKARELLGQMLE---------------KGLM-PNVITYNALINGYCKRGM 408

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A+ +   M       N   YN LI G C SN + ++  +L +M E    P   T NS
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    CR  +   A  L+  M  +G  P     T +I  LCK  +  EA      + Q+G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y+A I G     +VD A  +   + +  C P+ + +N +I GLC   ++ EA 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLID 578
            L  +M+  GL P+V+T  +LI+   K G+ D A     +ML   SG+ PD  TYTT I 
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS--SGTKPDAHTYTTFIQ 645

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
             C  GR  DA  +  +M E G +P+  T+ +LI G     +   A    + M++ G +P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705

Query: 639 DMFVFVALISAFL 651
               F++LI   L
Sbjct: 706 SQHTFLSLIKHLL 718



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 161/635 (25%), Positives = 292/635 (45%), Gaps = 54/635 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC----KSCS 81
           C  +  A   LI  L     ++EA  LF ++K +  C P   +Y  L+++LC    KS +
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE-CFPTVRTYTVLIKSLCGSERKSEA 342

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
           ++LV    KEM++ G   + +T T L+   C+  +F+KA  +  ++++ G +   + ++ 
Sbjct: 343 LNLV----KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K G ++ A +++E M+   +  N +T+  LI G+ K S V KA+ + +KM +  
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 457

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTL 258
              D   Y+ +I G C++   + A +L S M   G+ PD    + +I S   S   E   
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK----------------- 301
            + +  E + VN   ++  +++      G +D+A+ +L+ M+                  
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 302 ---GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
              G+      +E  M+  G + P  S+  I+I+ LLKDG  D A S F++M   G   +
Sbjct: 578 CADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y   I   C   RL ++ +++ +M E+G  P  FT +S+ +          A ++++
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696

Query: 419 KMRVQGHEPWVKHNTLLIK---------------ELCKHGKAME---AFRFLTDMVQEGF 460
           +MR  G EP       LIK               ELC     ME       L  MV+   
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAE 519
            P+   Y   I G+ ++  + +A ++F  +  + G  P  + +N ++S  CK ++  EA 
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            + ++MI  G +P + +  +LI G  K G  ++       +L+      D + +  +IDG
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC-GYYEDELAWKIIIDG 875

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           +   G  +    L+N ME+ GC  +  T+  LI G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 29/250 (11%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKR--EGLCVPNNYSYNCLLE--------- 74
           +SP    +  LI+  G +G   + N  FD +KR  +  C P+ +++  L++         
Sbjct: 668 VSPDLFTYSSLIKGYGDLG---QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 75  ---------ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
                    A+      D V   L++M ++    +  +   L+   C  G    A  VF+
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784

Query: 126 EIIDHGWVD--EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVK 182
            +  +  +   E VF+ LL    K  + ++A ++++ M  C   L +   C VLI G  K
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI-CVGHLPQLESCKVLICGLYK 843

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K   ++   +F  + + G+  D   + +II G+ K   +E   +L++ M+ +G     + 
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903

Query: 243 LSKLITSCSD 252
            S LI    D
Sbjct: 904 YSLLIEGPPD 913


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 287/636 (45%), Gaps = 36/636 (5%)

Query: 10  RIAPLRVLAQDV-VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           R  P R  A  + V       PG  G  +R L  +  ++ A  L   +       P   +
Sbjct: 55  RAPPERGRANSIWVNPTAPARPGGAGQTLRRLVQLEDLDAALRLVGSMPSSE--PPAVIA 112

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
            N L++ LC    +   E  L  +++ G   D  +   L+  YC  G+   A  V     
Sbjct: 113 CNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAK 171

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
             G  +   ++ L+  + + G +  A  LI  M    +  +  T+  ++ G     + +K
Sbjct: 172 VSGAANVVTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEK 228

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M ++    +   +   I   C+N  L+ A+QL   M   G TPD  I S L+ 
Sbjct: 229 AEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVN 288

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
             S++G +        +D  V   T+LC      +  N +       L+ +   E   DV
Sbjct: 289 GFSEQGRV--------DDALVLLNTMLCKP--NTVCYNAA-------LKGLCMAERWKDV 331

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G  +  + +    PN ++F ++ + L + G +D A+ +  +M + GC  +V +YN LI+ 
Sbjct: 332 GELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINY 391

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                R++++  LL  M      P   + N+  + LCR +       L+ +M ++   P 
Sbjct: 392 FSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQM-LREDCPL 447

Query: 429 VKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
           ++    +LI  LC+HG    A      M +    PDIV YS+ I G  +   V+ A+ELF
Sbjct: 448 IEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELF 507

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + +    C PD+ +YN ++ GLC+A R  +A +L   M  K   P+  T+N+LIN  C+ 
Sbjct: 508 QSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQK 564

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G  D+A+    +M E  S +PD+ TY  LI+G    GR DDA+ L + M    C P+ I+
Sbjct: 565 GFADRAIEVFKQMPEYGS-TPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAIS 620

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           + + + GLC+ +R + A      M  K   P+   F
Sbjct: 621 YNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 232/544 (42%), Gaps = 63/544 (11%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C   +   A  V + + + G  D    + L+  + + G +  A  ++E     + 
Sbjct: 116 LIKKLCAHRRLADAERVLDALKESGSADAVSHNTLVAGYCRDGRLADAERVLEAAK-VSG 174

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  T+  LI+G+ +  R+  AL L   M     A D   Y+ ++ GLC  KQ E A +
Sbjct: 175 AANVVTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEE 231

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM  +   P+               E+T   +                  +R    N
Sbjct: 232 LMEEMIRNNCHPN---------------EVTFATQ------------------IRSFCQN 258

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +D A  LL+ M +     DV +                +  ++N   + G++D AL L
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVI----------------YSTLVNGFSEQGRVDDALVL 302

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M    C  N   YN  + GLC + R ++  EL+ EM      P   T + +  CLC+
Sbjct: 303 LNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQ 359

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A+ +V +M+  G  P V     LI    + G+  +A   L  M+     PD + 
Sbjct: 360 HGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCN---PDTIS 416

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           ++AA+  L   +R     EL   +    C    + +NI+I  LC+   V  A ++F +M 
Sbjct: 417 FNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMP 476

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                P + TY+ LING+ + G ++ A+     M  K    PD+ +Y  ++ GLC A R 
Sbjct: 477 KYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK----PDIFSYNAVLKGLCRAARW 532

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           +DA  L   M  K C PN ITF  LI  LC+      A+  F+ M E G  PD+F + AL
Sbjct: 533 EDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNAL 592

Query: 647 ISAF 650
           I+ F
Sbjct: 593 INGF 596



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 141/311 (45%), Gaps = 10/311 (3%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD AL L   M        V   N LI  LC   RL ++  +L  ++ESG      + N+
Sbjct: 92  LDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNT 149

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    CR   +  A  ++   +V G    V + T LI   C+ G+  +A   +  M    
Sbjct: 150 LVAGYCRDGRLADAERVLEAAKVSGAANVVTY-TALINGYCRSGRLADALNLIASM---P 205

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD   Y+  + GL   K+ + A EL  ++  + C P+ V +   I   C+   +  A 
Sbjct: 206 VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAV 265

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L   M   G  P V  Y+ L+NG+ + G +D A++ L+ ML K    P+ + Y   + G
Sbjct: 266 QLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK----PNTVCYNAALKG 321

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC+A R  D   L  EM  K C PN  TF  L + LC+      A+     M++ G +PD
Sbjct: 322 LCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPD 381

Query: 640 MFVFVALISAF 650
           + ++  LI+ F
Sbjct: 382 VVIYNTLINYF 392



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 132/279 (47%), Gaps = 9/279 (3%)

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           S   P     N + + LC  + +  A  ++  ++  G    V HNT L+   C+ G+  +
Sbjct: 104 SSEPPAVIACNILIKKLCAHRRLADAERVLDALKESGSADAVSHNT-LVAGYCRDGRLAD 162

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R L      G   ++V Y+A I G     R+  AL L   I +    PD   YN ++ 
Sbjct: 163 AERVLEAAKVSG-AANVVTYTALINGYCRSGRLADALNL---IASMPVAPDTYTYNTVLK 218

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC A++  +AE+L  EMI     P+  T+   I  +C++G +D A+  L RM  +   +
Sbjct: 219 GLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM-PRYGCT 277

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+ Y+TL++G    GR DDA++L N M    C PN + + A + GLC  +R +     
Sbjct: 278 PDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGEL 334

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M  K   P+   F  L S          A EV+++M
Sbjct: 335 IAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM 373



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 40/211 (18%)

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L+ ++ +D AL L   + +    P V+A NI+I  LC  +R+A+AE + + +   G   +
Sbjct: 86  LVQLEDLDAALRLVGSMPSSEP-PAVIACNILIKKLCAHRRLADAERVLDALKESGSADA 144

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLE--KESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           V ++N L+ G+C+ G +  A     R+LE  K SG+ +V+TYT LI+G C +GR  DA+ 
Sbjct: 145 V-SHNTLVAGYCRDGRLADA----ERVLEAAKVSGAANVVTYTALINGYCRSGRLADALN 199

Query: 592 L-------------------------WNEMEE-------KGCAPNRITFMALITGLCKCD 619
           L                         W + EE         C PN +TF   I   C+  
Sbjct: 200 LIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNG 259

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
               A+     M   G  PD+ ++  L++ F
Sbjct: 260 LLDHAVQLLERMPRYGCTPDVVIYSTLVNGF 290



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 35/284 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG---- 60
           L  A R   +  L  ++V+  C  +      L  CL   GLV+ A  + +Q+++ G    
Sbjct: 322 LCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPD 381

Query: 61  ---------------------------LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
                                      LC P+  S+N  L+ALC++     VE  + +M 
Sbjct: 382 VVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQML 441

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
                  + T   L+   C  G  + A+ VF ++  +    + V +S L+  FS+ G V+
Sbjct: 442 REDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVE 501

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A EL + M     + +  ++  ++ G  + +R + A +L   M +     +   ++++I
Sbjct: 502 SAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILI 558

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             LC+    + A++++ +M   G TPD    + LI   S++G L
Sbjct: 559 NSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRL 602


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 172/668 (25%), Positives = 313/668 (46%), Gaps = 49/668 (7%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           R++ P      +V+ S           L+R      L++EA  +++++   G+   +N +
Sbjct: 198 RKVVPFVPYVNNVLSS-----------LVRS----NLIDEAKEIYNKMVLIGVA-GDNVT 241

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
              L+ A  +    +      + +   G   D    +  +Q  C +     AL +  E+ 
Sbjct: 242 TQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR 301

Query: 129 DHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               V   +  ++ ++VAF K G +++A  +++ M    I ++      L++G+ K + +
Sbjct: 302 GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNEL 361

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            KAL LF++M + G A D  M+ V++   CKN ++E A++ Y  MK   I P   ++  +
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421

Query: 247 ITSC--SDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           I  C  ++  E  L   EI+ D   + +    +CN I  +    G +D A + L+ M + 
Sbjct: 422 IQGCLKAESPEAAL---EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ- 477

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG + PN   ++ ++    +   +DLA S+F EM + G   N F Y
Sbjct: 478 --------------KG-IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA----LNLVR 418
           + LIDG   +   + +++++ +M  S F+      N++   LC+      A     NL++
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           + R         +N+ +I    K G    A     +M + G  P++V +++ I G     
Sbjct: 583 EKRYSMS--CTSYNS-IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+DLALE+  ++ +     D+ AY  +I G CK   +  A  LF+E+   GL+P+V+ YN
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI+G+   G +D A+    +M+  +  S D+ TYTT+IDGL   G  + A  L++E+ +
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMV-NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G  P+ I  M L+ GL K  +   A      MK+K + P++ ++  +I+    E N   
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818

Query: 659 AFEVLKEM 666
           AF +  EM
Sbjct: 819 AFRLHDEM 826



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 267/609 (43%), Gaps = 99/609 (16%)

Query: 58  REGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
           R  L VP +  +Y  ++ A  K  +++     + EM  +G        T L+  YC   +
Sbjct: 301 RGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNE 360

Query: 117 FDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIR-------- 167
             KAL +FN + + G   D+ +FS+++  F K  E++KA E   RM    I         
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420

Query: 168 -----------------LNEKTFCVLIHGFV---------KKSRVDKALQLFDKMTKSGF 201
                             N+     + HGF+         K+ +VD A      M + G 
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTL 258
             +   Y+ ++   C+ K +++A  ++SEM   G+ P+   + IL        DE     
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           ++ ++    +     ++ N+I+  L   G   +A  +LQ +IK               + 
Sbjct: 541 VINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK---------------EK 584

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
             S + +S++ II+  +K G  D A+  +REM++ G   NV  + +LI+G C SNR++ +
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644

Query: 379 YELLREMEESGFK---PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+  EM+    K   P +                 GAL                     
Sbjct: 645 LEMTHEMKSMELKLDLPAY-----------------GAL--------------------- 666

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   CK      A+   +++ + G +P++  Y++ I G  ++ ++D A++L++ +   G 
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             D+  Y  +I GL K   +  A DL++E++  G++P    + +L+NG  K G   +A  
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M +K+  +P+V+ Y+T+I G    G  ++A  L +EM EKG   +   F  L++G 
Sbjct: 787 MLEEM-KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG- 844

Query: 616 CKCDRPRAA 624
            + ++P AA
Sbjct: 845 -RVEKPPAA 852



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 253/574 (44%), Gaps = 61/574 (10%)

Query: 102 YTLTP-----LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKAC 155
           + LTP     LL  Y  + + D A+  F  ++D   V    + + +L +  +   +D+A 
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           E+  +M    +  +  T  +L+   +++ + ++A+++F ++   G   D  ++ + +   
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK   L MAL L  EM+G           KL    S E   +++V               
Sbjct: 285 CKTPDLVMALDLLREMRG-----------KLGVPASQETYTSVIVA-------------- 319

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
                   V  G++++A  ++  M+        G+ M +I   +          ++N   
Sbjct: 320 -------FVKEGNMEEAVRVMDEMV------GFGIPMSVIAATS----------LVNGYC 356

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K  +L  AL LF  M + G   +  +++ +++  C +  +E++ E    M+     P+  
Sbjct: 357 KGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSV 416

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK---ELCKHGKAMEAFRFL 452
            +++M +   + +    AL +         E W+ H  +  K     CK GK   A  FL
Sbjct: 417 LVHTMIQGCLKAESPEAALEIFN----DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M Q+G  P++V Y+  +     +K +DLA  +F ++   G  P+   Y+I+I G  K 
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           +    A D+ N+M       +   YN +ING CK G   +A   L  +++++  S    +
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y ++IDG    G  D A+  + EM E G +PN +TF +LI G CK +R   AL     MK
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              +K D+  + ALI  F  + +   A+ +  E+
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 4/279 (1%)

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GF+ T    N +     R + +  A++    M  +   P+V +   ++  L +     EA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 MV  G   D V     +   +  ++ + A+++FR + + G  PD + +++ +  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 509 LCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            CK   +  A DL  EM  K G+  S  TY  +I  + K GN+++A+  +  M+    G 
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV--GFGI 341

Query: 568 P-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           P  VI  T+L++G C       A+ L+N MEE+G AP+++ F  ++   CK      A+ 
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            +  MK   + P   +   +I   L   +P  A E+  +
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 3/294 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  VG   +A  +   + +E     +  SYN +++   K    D      +EM + 
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C S + D AL + +E+      +D   +  L+  F K  ++  A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   + +  +  N   +  LI GF    ++D A+ L+ KM   G + D   Y  +I G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
           L K+  + +A  LYSE+   GI PD  +   L+   S +G+     K + E   +DV   
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            LL ++++      G++++A+ L   M++   + D  V  L++      P  +S
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAAS 853


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 297/600 (49%), Gaps = 37/600 (6%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           PG   +  L+       L+E+A       +  G+ +PN  +YN L++   K      VE 
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGI-LPNLQTYNILIKISVKK--RQFVEA 168

Query: 88  RLKEMQDYGWGYD----KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
             K + D+ W  D     Y+   ++     SG    AL VF+E+ + G V D   ++I++
Sbjct: 169 --KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 143 VAFSKWGEVDKACELIERMDDCN-IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
             F K G+  +  E+ ER+   + +  N  T+ V+I+G  K  R D++L+++++M K+  
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   Y  +I GLC    ++ A+++Y EM    +  D    + L+      G++     
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF- 345

Query: 262 EIW----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
           E+W    ++   N ++   N  +R L  N  +++A ++ + + +    AD          
Sbjct: 346 ELWVMMGKENCHNVVSY--NIFIRGLFENRKVEEAISVWELLRRRGSGAD---------- 393

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                 ++++ ++I+ L K+G L+ AL + +E    G   + F Y++++DGL    R++E
Sbjct: 394 ------STTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDE 447

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +  ++ +M++ G + +    N +     R   +  A+   R+M  +G  P V     LI 
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK  +  +A+ F+ +M+++ + PD++ YS  + GL   K++D+AL L+R +   G  P
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEP 567

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DV  +NI++ GLC A ++ +A  L++ M     +P++ T+N L++G  K+   + A +  
Sbjct: 568 DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIW 627

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           + M  K    PD+I+Y   + GLC  GR  D I L+++  + G  P  IT+  L+  + K
Sbjct: 628 ACMF-KNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK 686



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 240/496 (48%), Gaps = 52/496 (10%)

Query: 59  EGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           +G CV PN  +YN ++  LCK    D      + M+      D +T + L+   C+ G  
Sbjct: 247 KGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNV 306

Query: 118 DKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+ V+ E++    V +   ++ LL  F + G++ ++ EL   M   N   N  ++ + 
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIF 365

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  +  +V++A+ +++ + + G  +D+  Y V+I GLCKN  L  AL++  E K  G 
Sbjct: 366 IRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD 425

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
             D    S ++   S +G                                  +D+A  ++
Sbjct: 426 KLDAFAYSSIVDGLSKQGR---------------------------------VDEALGIV 452

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M K       G E+        SP+    + +IN  ++  KL+ A+  FREM   GC 
Sbjct: 453 HQMDK------YGCEL--------SPHVC--NPLINGFVRASKLEEAICFFREMETKGCS 496

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             V  YN LI+GLC + R  ++Y  ++EM E  +KP   T + +   LC+ + +  ALNL
Sbjct: 497 PTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNL 556

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            R++ V+G EP V  + +L+  LC  GK  +A    ++M Q   LP++V ++  + GL  
Sbjct: 557 WRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYK 616

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            +  ++A  ++  +  +G  PD+++YNI + GLC   R+++   LF++ +  G++P+  T
Sbjct: 617 ARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSIT 676

Query: 537 YNLLINGWCKSGNIDQ 552
           + +L+    K G +D 
Sbjct: 677 WYILVRAVLKLGPLDS 692



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 268/584 (45%), Gaps = 72/584 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDC 164
           +L+ Y  S   ++AL  F ++ +       +  ++ LL AF +   ++KA   +   +  
Sbjct: 84  VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV 143

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  N +T+ +LI   VKK +  +A  L D M       D   Y  +I G+ K+  L  A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--------RDVNTMTLLC 276
           L+++ EM   G+ PD    + +I      G+  +  KEIWE          +V T  ++ 
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDY-VQGKEIWERLVKGSCVYPNVVTYNVMI 262

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N + ++    G  D++  + + M K E   D+                 ++  +I  L  
Sbjct: 263 NGLCKM----GRFDESLEMWERMKKNECEMDL----------------FTYSSLICGLCD 302

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH-- 394
            G +D A+ +++EM +   + +V  YN L++G C + +++ES+EL   M   G +  H  
Sbjct: 303 VGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMM---GKENCHNV 359

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            + N   R L   + V  A+++   +R +G         +LI  LCK+G   +A + L +
Sbjct: 360 VSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKE 419

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL---------------------------- 486
               G   D   YS+ + GL    RVD AL +                            
Sbjct: 420 AKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASK 479

Query: 487 -------FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
                  FR++   GC P VV+YN +I+GLCKA+R ++A     EM+ K   P + TY+L
Sbjct: 480 LEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSL 539

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L++G C+   ID A L L R +  +   PDV  +  L+ GLC AG+ +DA++L++ M++ 
Sbjct: 540 LMDGLCQGKKIDMA-LNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQS 598

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            C PN +T   L+ GL K      A V +  M + G +PD+  +
Sbjct: 599 NCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISY 642



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 125/239 (52%), Gaps = 1/239 (0%)

Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           AL+  +KM  + G +P ++    L+    +     +A  FL      G LP++  Y+  I
Sbjct: 97  ALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILI 156

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
              +  ++   A  L   + +    PDV +Y  +I+G+ K+  +  A ++F+EM  +GL+
Sbjct: 157 KISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V  YN++I+G+ K G+  Q      R+++     P+V+TY  +I+GLC  GR D+++ 
Sbjct: 217 PDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLE 276

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +W  M++  C  +  T+ +LI GLC       A+  ++ M ++ +  D+  + AL++ F
Sbjct: 277 MWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF 335


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 238/508 (46%), Gaps = 63/508 (12%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+  +  +L++AF +  ++ +  E  +R  D   +L+  +   L+ G VK+S       +
Sbjct: 83  VNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFV 142

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           + +M K     +   +++++ GLCK  +L  A  +  +MK  G++P+    + LI     
Sbjct: 143 YREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCK 202

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            G +  + K               ++I++ +V+ G                         
Sbjct: 203 MGRIGKMYK--------------ADAILKEMVAKG------------------------- 223

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                  + PN  +++I+I+   KD  +  A+ +F EM + G   NV  YN LI+GLC+ 
Sbjct: 224 -------ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            +++E+  L  +M  S  +P   T N +    C+ + V  A+NL   M  QG +P     
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI   CK G+  +AF     M+  G  P++  Y+  I GL     V  A  L  ++ +
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
                DVV YNI+I  LCK     +A  L +EM  KGL PS  TYN L++G+C+ GN+  
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A++  +RM E++    +V+T+  LI G C+ GR +DA  L NEM E+G  PNR T+    
Sbjct: 457 ALIVRTRM-ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY---- 511

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDM 640
                       ++   MM EKG  PD+
Sbjct: 512 -----------EIIKEEMM-EKGFVPDI 527



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 185/359 (51%), Gaps = 4/359 (1%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL  ++K     D+      + K  +  N  SF+I++N L K GKL+ A  +  +M   G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYE---LLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
              NV  YN LIDG C   R+ + Y+   +L+EM   G  P   T N +    C+ ++V 
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           GA+ +  +M+ QG  P V    +LI  LC  GK  EA      MV     P++V ++  I
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    K V+ A+ LF D+   G  P+ + Y  +I   CK  R+ +A  L+N MI +G+ 
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V+TYN LI G C+ G++  A   ++ M+ K+  S DV+TY  LID LC  G    A+ 
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKL-SADVVTYNILIDSLCKKGESRKAVK 424

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           L +EM EKG  P+ +T+  L+ G C+    RAAL+    M+ KG + ++     LI  F
Sbjct: 425 LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGF 483



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 175/342 (51%), Gaps = 4/342 (1%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           D+++   +++ K+      F+     G   ++   N L+ GL   +   +   + REM +
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
              +    + N +   LC+   +  A +++  M+V G  P V     LI   CK G+  +
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208

Query: 448 AFR---FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            ++    L +MV +G  P+ V Y+  I G    + V  A+ +F ++   G  P+VV YNI
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+GLC   +V EA  L ++M++  L P+V T+N+LING+CK+  +++A+   + M EK+
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM-EKQ 327

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+ +TYTTLID  C  GR +DA  L+N M ++G  P   T+  LI GLC+    +AA
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 M  K +  D+  +  LI +   +     A ++L EM
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 197/453 (43%), Gaps = 40/453 (8%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
            K   DYG+     +  PLL       +      V+ E+I     ++   F+I++    K
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK---ALQLFDKMTKSGFASD 204
            G++++A ++IE M    +  N  T+  LI G+ K  R+ K   A  +  +M   G   +
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPN 227

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
              Y+++I G CK++ +  A++++ EM+  G+ P+    + LI     +G++   + +++
Sbjct: 228 EVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRD 287

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                D+    +  N ++     N ++++A NL   M                 K  V P
Sbjct: 288 QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM----------------EKQGVDP 331

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I+   KDG+++ A +L+  M   G    V  YN LI GLC    ++ +  L+
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCK 441
            EM          T N +   LC++ +   A+ L+ +M  +G  P  V +NTL+    C+
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM-DGYCR 450

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A    T M ++G   ++V ++  I G     R++ A  L  ++   G  P+   
Sbjct: 451 EGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT 510

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           Y II                  EM+ KG +P +
Sbjct: 511 YEIIKE----------------EMMEKGFVPDI 527



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 203/455 (44%), Gaps = 50/455 (10%)

Query: 26  CFMSPGALGF---LIRC----LGSVGLVEEANMLF---DQVKREGLCVPNNYSYNCLLEA 75
            F   G  GF   LI C     G V   E  +M F   + +KR+     N  S+N ++  
Sbjct: 107 AFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRK--IELNVISFNIVVNG 164

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD---KALSVFNEIIDHGW 132
           LCK   ++     +++M+ +G   +  T   L+  YC  G+     KA ++  E++  G 
Sbjct: 165 LCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224

Query: 133 V-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
             +E  ++IL+  F K   V  A  +   M    +R N  T+ +LI+G     +VD+A+ 
Sbjct: 225 CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVA 284

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L D+M  S    +   ++V+I G CKNK +  A+ L+++M+  G+ P+    + LI +  
Sbjct: 285 LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344

Query: 252 DEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
            +G +     +  +  DR +       N ++  L   G +  A +L+  M+  +  ADV 
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV- 403

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                           +++I+I++L K G+   A+ L  EM + G   +   YN L+DG 
Sbjct: 404 ---------------VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C    L  +  +   ME  G +    T N + +  C +  +  A  L+ +M  +G  P  
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN- 507

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           +    +IKE               +M+++GF+PDI
Sbjct: 508 RTTYEIIKE---------------EMMEKGFVPDI 527


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 260/584 (44%), Gaps = 83/584 (14%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D A+ +F +++        V F+ LL A +K  + +    L E+M    I  +  T+ 
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           + I+ F ++S++  AL +  KM K G+  D      ++ G C +K++  A+ L  +M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  PD                                 T    +++  L  +    +A  
Sbjct: 183 GYKPD---------------------------------TFTFTTLIHGLFLHNKASEAVA 209

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M++               +G   P+  ++  ++N L K G +DLAL+L  +M    
Sbjct: 210 LVDQMVQ---------------RG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV ++N +ID LC    +E + +L  EME  G +P   T NS+  CLC       A 
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +   P V     LI    K GK +EA +   +M+Q    PD + Y+  I G 
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R+D A ++F+ + +  C P++  YN +I+G CK +RV +  +LF EM  +GL+ + 
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA----- 589
            TY  +I G+ ++G+ D A +   +M+     + D++TY+ L+ GLC  G+ D A     
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT-DIMTYSILLHGLCSYGKLDTALVIFK 492

Query: 590 ----------IMLWNEMEEKGCA-----------------PNRITFMALITGLCKCDRPR 622
                     I ++N M E  C                  P+ +T+  +I+GLC     +
Sbjct: 493 YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A   FR MKE G  P+   +  LI A L + +   + E++KEM
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 250/537 (46%), Gaps = 28/537 (5%)

Query: 46  VEEANMLF-DQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           V++A  LF D VK      P+   +N LL A+ K    +LV    ++MQ  G  +D YT 
Sbjct: 64  VDDAVDLFGDMVKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
           +  +  +C   Q   AL+V  +++  G+  + V  S LL  +     +  A  L+++M +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
              + +  TF  LIHG    ++  +A+ L D+M + G   D   Y  ++ GLCK   +++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           AL L ++M+ + I  +  I + +I S      + + V      E + +    +  NS++ 
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L + G    A  LL  M++ +                ++PN  +F+ +I+   K+GKL 
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKK----------------INPNVVTFNALIDAFFKEGKLV 345

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L  EM Q     +   YN LI+G C  NRL+E+ ++ + M      P   T N++ 
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C+ + V   + L R+M  +G        T +I+   + G    A      MV     
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            DI+ YS  + GL    ++D AL +F+ +       ++  YN +I G+CKA +V EA DL
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLI 577
           F  +  K   P V TYN +I+G C    + +A     +M  KE G+ P+  TY TLI
Sbjct: 526 FCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKM--KEDGTLPNSGTYNTLI 577



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 263/574 (45%), Gaps = 59/574 (10%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           D+VKSR F S      L+  +  +   E    L +Q++  G+   + Y+Y+  +   C+ 
Sbjct: 73  DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRR 131

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVF 138
             + L    L +M   G+  D  TL+ LL  YC+S +   A+++ +++++ G+  D   F
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+       +  +A  L+++M     + +  T+  +++G  K+  +D AL L +KM  
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---E 255
           +   ++  +++ II  LCK + +E+A+ L++EM+  GI P+    + LI    + G   +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
            + L+  + E + +N   +  N+++      G + +A  L + MI+              
Sbjct: 312 ASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR------------- 357

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
              ++ P+T +++++IN      +LD A  +F+ M    C+ N+  YN LI+G C   R+
Sbjct: 358 ---SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTL 434
           E+  EL REM + G      T  ++ +   +  D   A  +V K  V    P  +   ++
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-QMVFKQMVSNRVPTDIMTYSI 473

Query: 435 LIKELCKHGK--------------AMEAFRFLTDMVQEGFL------------------P 462
           L+  LC +GK               ME   F+ + + EG                    P
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII-SGLCKAQRVAEAEDL 521
           D+V Y+  I GL   + +  A +LFR +   G  P+   YN +I + L    R A AE L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE-L 592

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             EM + G +   +T +L+ N     G +D++ L
Sbjct: 593 IKEMRSSGFVGDASTISLVTN-MLHDGRLDKSFL 625



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 169/408 (41%), Gaps = 69/408 (16%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+ N L    K+D A+ LF +M +     ++  +N L+  +   N+ E    L  +M+ 
Sbjct: 52  EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G     +T +    C CRR  +  AL ++ KM   G+EP +   + L+   C   +  +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY----- 502
           A   +  MV+ G+ PD   ++  I GL    +   A+ L   +   GC PD+V Y     
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 503 ------------------------------NIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
                                         N II  LCK + V  A DLF EM TKG+ P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKE---------------------------- 564
           +V TYN LIN  C  G    A   LS MLEK+                            
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351

Query: 565 ------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
                 S  PD ITY  LI+G C+  R D+A  ++  M  K C PN  T+  LI G CKC
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R    +  FR M ++G+  +   +  +I  F    +   A  V K+M
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 266/596 (44%), Gaps = 86/596 (14%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDH-------------------GW--------------- 132
           L++ Y  S +  +A   F  I+DH                   GW               
Sbjct: 31  LIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSN 90

Query: 133 --VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
             V+ +  +I++  + K  E DK   +I  M+   +  +  T  V++    +    + A+
Sbjct: 91  SEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAM 150

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L D M   G       Y+ ++ GLC++   + A +++ EM   G+ PD           
Sbjct: 151 ALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD----------- 199

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                             V + T+L     R+    G I++A  + + M           
Sbjct: 200 ------------------VRSFTILIGGFCRV----GEIEEALKIYKEMRH--------- 228

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +G + P+  SF  +I    + GK+D A++  REM   G + +  +Y  +I G C
Sbjct: 229 ------RG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC 281

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +  + ++  +  EM   G  P   T N++   LC+ + ++ A  L+ +MR +G  P + 
Sbjct: 282 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 341

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   C  GK  +A +    M+ +   PDIV Y+  I G+     +D A +L+ D+
Sbjct: 342 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            +    P+ V Y+I+I   C+  +V +A    +EMI KG++P++ TYN +I G+C+SGN+
Sbjct: 402 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 461

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +    L +M+  +  SPD+ITY TLI G     +  DA  L N ME++   P+ +T+  
Sbjct: 462 SKGQKFLQKMMVNKV-SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 520

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI G       + A   F  M  KG++PD + ++++I+  ++  N   AF++  EM
Sbjct: 521 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 245/560 (43%), Gaps = 92/560 (16%)

Query: 53  FDQV-----KREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           FD+V     + E  CV P+  ++N +++A  ++   +     +  M   G      T   
Sbjct: 111 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 170

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+  C SG +DKA  VF E+ D G   D   F+IL+  F + GE+++A ++ + M    
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I+ +  +F  LI  F ++ ++D A+    +M   G   D  +Y ++IGG C+   +  AL
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           ++  EM G G  PD    + L+           L KE                  R+L +
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNG---------LCKE-----------------RRLLDA 324

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G +++                      M  +G V P+  +F  +I+    +GKLD AL 
Sbjct: 325 EGLLNE----------------------MRERG-VPPDLCTFTTLIHGYCIEGKLDKALQ 361

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF  M       ++  YN LIDG+C    L+++ +L  +M      P H T         
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY-------- 413

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                                      ++LI   C+ G+  +AF FL +M+ +G LP+I+
Sbjct: 414 ---------------------------SILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y++ I G      V    +  + +  +   PD++ YN +I G  K  ++ +A  L N M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             + + P V TYN+LING+   GN+ +A     +M  K    PD  TY ++I+G   AG 
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEPDRYTYMSMINGHVTAGN 565

Query: 586 PDDAIMLWNEMEEKGCAPNR 605
             +A  L +EM ++G    R
Sbjct: 566 SKEAFQLHDEMLQRGKEKRR 585


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 266/596 (44%), Gaps = 86/596 (14%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDH-------------------GW--------------- 132
           L++ Y  S +  +A   F  I+DH                   GW               
Sbjct: 92  LIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSN 151

Query: 133 --VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
             V+ +  +I++  + K  E DK   +I  M+   +  +  T  V++    +    + A+
Sbjct: 152 SEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAM 211

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L D M   G       Y+ ++ GLC++   + A +++ EM   G+ PD           
Sbjct: 212 ALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD----------- 260

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                             V + T+L     R+    G I++A  + + M           
Sbjct: 261 ------------------VRSFTILIGGFCRV----GEIEEALKIYKEMRH--------- 289

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +G + P+  SF  +I    + GK+D A++  REM   G + +  +Y  +I G C
Sbjct: 290 ------RG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC 342

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +  + ++  +  EM   G  P   T N++   LC+ + ++ A  L+ +MR +G  P + 
Sbjct: 343 RAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC 402

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   C  GK  +A +    M+ +   PDIV Y+  I G+     +D A +L+ D+
Sbjct: 403 TFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 462

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            +    P+ V Y+I+I   C+  +V +A    +EMI KG++P++ TYN +I G+C+SGN+
Sbjct: 463 HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNV 522

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +    L +M+  +  SPD+ITY TLI G     +  DA  L N ME++   P+ +T+  
Sbjct: 523 SKGQKFLQKMMVNKV-SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI G       + A   F  M  KG++PD + ++++I+  ++  N   AF++  EM
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 246/559 (44%), Gaps = 92/559 (16%)

Query: 53  FDQV-----KREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           FD+V     + E  CV P+  ++N +++A  ++   +     +  M   G      T   
Sbjct: 172 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 231

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+  C SG +DKA  VF E+ D G   D   F+IL+  F + GE+++A ++ + M    
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I+ +  +F  LI  F ++ ++D A+    +M   G   D  +Y ++IGG C+   +  AL
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           ++  EM G G  PD    + L+                           LC    R+L +
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNG-------------------------LCKE-RRLLDA 385

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G +++                      M  +G V P+  +F  +I+    +GKLD AL 
Sbjct: 386 EGLLNE----------------------MRERG-VPPDLCTFTTLIHGYCIEGKLDKALQ 422

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF  M       ++  YN LIDG+C    L+++ +L  +M      P H T         
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY-------- 474

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                                      ++LI   C+ G+  +AF FL +M+ +G LP+I+
Sbjct: 475 ---------------------------SILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y++ I G      V    +  + +  +   PD++ YN +I G  K  ++ +A  L N M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             + + P V TYN+LING+   GN+ +A     +M  K    PD  TY ++I+G   AG 
Sbjct: 568 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEPDRYTYMSMINGHVTAGN 626

Query: 586 PDDAIMLWNEMEEKGCAPN 604
             +A  L +EM ++G AP+
Sbjct: 627 SKEAFQLHDEMLQRGFAPD 645



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 217/493 (44%), Gaps = 55/493 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G  E A  L D +  +GL  P   +YN +L+ LC+S   D      KEM D+G   D  
Sbjct: 204 AGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           + T L+  +C  G+ ++AL ++ E+   G   + V FS L+  F++ G++D A   +  M
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  +   + ++I GF +   +  AL++ D+M   G   D   Y+ ++ GLCK ++L
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSI 279
             A  L +EM+  G+ PD    + LI     EG+L   L + +   ++ +    +  N++
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  +   G +D+A +L   M   E                + PN  ++ I+I++  + G+
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSRE----------------IFPNHVTYSILIDSHCEKGQ 486

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A     EM   G + N+  YN++I G C S  + +  + L++M  +   P   T N+
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                                              LI    K  K  +AF+ L  M +E 
Sbjct: 547 -----------------------------------LIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD+V Y+  I G      V  A  +F  +CA G  PD   Y  +I+G   A    EA 
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 520 DLFNEMITKGLIP 532
            L +EM+ +G  P
Sbjct: 632 QLHDEMLQRGFAP 644


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 280/639 (43%), Gaps = 46/639 (7%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           + Q+ REGL  PN   YN ++ ALCK  +V   E  + ++   G   D +T T ++  YC
Sbjct: 216 YHQILREGL-QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYC 274

Query: 113 NSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
            +   D A  +FN + + G   +   +S L+      G V++A + I  M    +     
Sbjct: 275 RNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF   I       R++ A ++F  M K G   +   Y  +I G    +   MA+ L+  M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRM 391

Query: 232 KGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
              G+ P+    + L+    +  E+   L+V  +         T   N ++R   + G  
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++A ++L  M+KG P                +P   +++III      G  D+A+ +   
Sbjct: 452 EKAMSMLTNMLKGRP----------------TPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   GC  + + Y  LI G C  +++E +  +  EM + G  P   T  ++    C+ + 
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  ++ +M+  G  P V+   +LI  L K      A      M++E   PD+V YS 
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL +   + LALE+F  +  HGC P++  Y+ +I  L +  RV EAE++F+E+  +G
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC-------I 582
           LIP   TY  +I     SG +D+A   L  M+      P + TY  LI GL        +
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA-GCQPTLQTYDVLIKGLQNEMVYHKL 734

Query: 583 AGRP--------DDAIM-------LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
              P        DD I+       L +++ E     +R  + AL++ L +  R   A   
Sbjct: 735 VALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNL 794

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +R M  +   P+   +   + + L  L   LA +V K M
Sbjct: 795 YRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHM 833



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 44/356 (12%)

Query: 334 LLKDGKLDLALSLFREMTQI---GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           L++  KL++  ++     QI   G   N+ +YN++I+ LC    + ++  ++ ++ +SG 
Sbjct: 200 LIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGM 259

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           KP  FT  SM    CR +D+  A  +  +M  +G EP     + LI  LC  G+  EA  
Sbjct: 260 KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD 319

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F+++M + G LP +  ++A I  L D+ R++ A ++F D+   GC P+V  Y  +ISG  
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-- 377

Query: 511 KAQRVAE-AEDLFNEMITKGLIPSVATYNLLIN--------------------------- 542
             QRV+  A  LF+ M   G++P+  TYN L+N                           
Sbjct: 378 --QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435

Query: 543 --------GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
                   G+C  G+ ++AM  L+ ML K   +P ++TY  +I G C +G  D AI +  
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNML-KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            M+  GC P+  ++  LI+G CK  +   A   F  M ++G+ P+   + ALIS +
Sbjct: 495 LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 251/556 (45%), Gaps = 55/556 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF ++ R+G+ VPN  +YN L+  L ++  +D   +    M  +G   +  +   L++ Y
Sbjct: 387 LFHRMSRDGV-VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G  +KA+S+   ++        V ++I++  +   G+ D A  ++E M     + +E
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            ++  LI GF K S+++ A  +F++M   G   +   Y  +I G CK+++L+ A ++   
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR---DVNTMTLLCNSIMRILV 284
           MK SG  P+ +  + LI   + +   +    L K + E++   DV T + + N     L 
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVING----LC 621

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +NG+I  A  +   M+K                G + PN  ++  +I  L ++G+++ A 
Sbjct: 622 NNGAIPLALEMFNKMVK---------------HGCL-PNLHTYSSLIQALGQEGRVEEAE 665

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F E+ + G + +   Y  +I+    S +++ +++ L EM  +G +PT  T + + + L
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725

Query: 405 CRR------------------------QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
                                      +DV+  L+   K+     E   +    L+  L 
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS--SKLAELDFELSRQLYDALLSRLS 783

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  EA      MV +   P+   Y   +  L+   +VDLA+++F+ +    C   + 
Sbjct: 784 RSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLT 843

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I  LC+  R  EA  +F +M+++ L      + +LING   +G  D  M  L  +
Sbjct: 844 GYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL-HI 902

Query: 561 LEKESGSPDVITYTTL 576
           +E    +P     T L
Sbjct: 903 METNRRNPSSHARTIL 918



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 221/490 (45%), Gaps = 40/490 (8%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           K  C  +  +   LIR   ++G  E+A +ML + +K  G   P   +YN +++  C S  
Sbjct: 428 KHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK--GRPTPTLVTYNIIIKGYCDSGD 485

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSI 140
            D+    L+ M+  G   D+++ T L+  +C   + + A  +FNE++D G   +E  ++ 
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K  ++D A  ++ERM     R N +T+ VLIHG  K++    A +L   M +  
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
            + D   Y  +I GLC N  + +AL+++++M   G  P+    S LI +   EG +    
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE-EA 664

Query: 261 KEIWEDRDVNTMTLLCNSI-----MRILVSNGSIDQAYNLLQAMIKG--EPIADV----- 308
           +E++   ++    L+ + +     + + V +G +D+A++ L  MI    +P         
Sbjct: 665 EEMFS--ELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLI 722

Query: 309 -GVEMLMIFKGTVS-PN---TSSF-DIIIN----TLLKDGKLDLALSLFREMTQIGCMQN 358
            G++  M++   V+ PN   TS+F D IIN    ++L     +L   L R+         
Sbjct: 723 KGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQ--------- 773

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
             LY+ L+  L  S R  E+  L R M      P   T       L R   V  A+++ +
Sbjct: 774 --LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFK 831

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M  Q  E  +     LI  LC+  +  EA      M+      D + ++  I GL+   
Sbjct: 832 HMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891

Query: 479 RVDLALELFR 488
             DL +E   
Sbjct: 892 YKDLCMEFLH 901



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 159/376 (42%), Gaps = 47/376 (12%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL----CNSNRLEESYELLREM 385
           +I +     ++  AL+     +Q G    +F Y  L+  L      S  ++  +++LRE 
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE- 222

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G +P     NS+   LC+  +V  A +++ K+   G +P     T +I   C++   
Sbjct: 223 ---GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             AF     M +EG  P+   YS  I GL +  RV+ AL+   ++  HG  P V  +   
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I  LC   R+ +A  +F +M  KG  P+V TY  LI+G      + +  + L   + ++ 
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ----RVSRMAIGLFHRMSRDG 395

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC------- 618
             P+ +TY  L++ L      D A++++N M + GC PN  ++  LI G C         
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455

Query: 619 --------DRPRAALVHF--------------------RMMKEKGMKPDMFVFVALISAF 650
                    RP   LV +                     +MK  G +PD + +  LIS F
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515

Query: 651 LSELNPPLAFEVLKEM 666
                  LA  +  EM
Sbjct: 516 CKISKMELASGMFNEM 531



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 24/250 (9%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +VK  C  +      LI+ LG  G VEEA  +F ++K++GL +P+  +Y  ++E    S 
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL-IPDEVTYVKMIEVCVMSG 694

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN----EIIDHGWVDEH 136
            VD     L EM + G      T   L++   N   + K +++ N       D   +++ 
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKD 754

Query: 137 VFSI-------------------LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           V S+                   LL   S+ G   +A  L   M   +   N+ T+   +
Sbjct: 755 VISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
              ++  +VD A+ +F  M+          Y  +I  LC+  + + A  ++ +M    + 
Sbjct: 815 ISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALN 874

Query: 238 PDFEILSKLI 247
            D  + + LI
Sbjct: 875 ADEIVWTILI 884


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 192/665 (28%), Positives = 318/665 (47%), Gaps = 51/665 (7%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +  IL RA+ I+ +  L Q +++    +S  +L  LIR L   GL   +++ F Q +   
Sbjct: 50  ITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGL---SDLAFSQFQSFR 106

Query: 61  LCVPNN----YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
             VP N    Y YN +LE+  +   VD      K+M   G   + YTL  L+   C+SG+
Sbjct: 107 SQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGR 166

Query: 117 FDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           F+ A  VF+++   G   +E  F IL+  + + G   +A EL++ M    ++ N+  +  
Sbjct: 167 FEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNT 226

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS- 234
           LI  F ++ R ++A +L ++M + G   D   ++  I  LC   ++  A +++ +M+   
Sbjct: 227 LISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDE 286

Query: 235 --GIT-PDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRI-LVSNG 287
             G+  P+    + ++     EG   E   LV+ +   R+ N M L   +I  + LV NG
Sbjct: 287 ELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM--KRNGNLMELESYNIWLLGLVRNG 344

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                  LL+A +  + + D G+E          PN  SF+ +++ L K+G +  A  + 
Sbjct: 345 K------LLEAQLALKEMVDKGIE----------PNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M   G   +   Y+ L+ G C++ ++ ++  +L EM   G  P  +T N +   L + 
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A  L++KM  + ++       ++I  LCK GK  EA   +  M   G        
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG-------- 500

Query: 468 SAAIGGLID--IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           SAA+G L +  I  VD +           C PD++ Y+III+GLCKA R+ EA   F EM
Sbjct: 501 SAALGNLGNSFIGLVDSSSN------GKKCLPDLITYSIIINGLCKAGRLDEARKKFIEM 554

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           + K L P    Y+  I+ +CK G I  A   L  M EK   +  + TY +LI GL    +
Sbjct: 555 VGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM-EKRGCNKSLQTYNSLILGLGSKNQ 613

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +   L ++M+EKG  PN  T+  +I+ LC+  R + A      M +KG+ P++  F  
Sbjct: 614 IFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRL 673

Query: 646 LISAF 650
           LI AF
Sbjct: 674 LIKAF 678



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 23/405 (5%)

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           ++V+ ++L+  +++RIL  +G  D A++  Q+     P                 P    
Sbjct: 75  QEVSHVSLI--ALIRILAKSGLSDLAFSQFQSFRSQVP--------------ANPPPVYL 118

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +++++ + L++ K+D    L+++M   G     +  N LI GLC+S R E++ E+  +M 
Sbjct: 119 YNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMG 178

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA 445
             G +P  F+   + R  CR    + AL L+  M   G +P  V +NT LI   C+ G+ 
Sbjct: 179 VKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNT-LISSFCREGRN 237

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC----PDVVA 501
            EA R +  M ++G  PD+V +++ I  L    ++  A  +FRD+          P++  
Sbjct: 238 EEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITT 297

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N+++ G CK   + EA+ L   M   G +  + +YN+ + G  ++G + +A L L  M+
Sbjct: 298 FNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMV 357

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +K    P++ ++ T++DGLC  G   DA M+   M   G  P+ +T+  L+ G C   + 
Sbjct: 358 DK-GIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKV 416

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A      M  +G  P+ +    L+ +   E     A ++L++M
Sbjct: 417 LKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM 461



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 150/628 (23%), Positives = 265/628 (42%), Gaps = 106/628 (16%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G L+R     GL   A  L D +   G+  PN   YN L+ + C+    +  E  ++ 
Sbjct: 188 SFGILVRGYCRAGLSMRALELLDGMGSFGV-QPNKVIYNTLISSFCREGRNEEAERLVER 246

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV---------FSILL 142
           M++ G   D  T    +   C++G+  +A  +F ++     +DE +         F+++L
Sbjct: 247 MREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM----QIDEELGLPRPNITTFNLML 302

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
             F K G +++A  L+E M      +  +++ + + G V+  ++ +A     +M   G  
Sbjct: 303 EGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIE 362

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL------ 256
            +   ++ ++ GLCKN  +  A  +   M  SGI PD    S L+  C   G++      
Sbjct: 363 PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNI 422

Query: 257 ----------------TLLVKEIWED---------------RDVNTMTLLCNSIMRILVS 285
                            +L+  +W++               R  +   + CN ++  L  
Sbjct: 423 LHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCK 482

Query: 286 NGSIDQAYNLLQAM-IKGEP-IADVGVEML--------------------MIFKG----- 318
           +G +D+A  +++ M I G   + ++G   +                    +I  G     
Sbjct: 483 SGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAG 542

Query: 319 ---------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                          ++ P++  +D  I++  K GK+  A  + ++M + GC +++  YN
Sbjct: 543 RLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYN 602

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI GL + N++ E Y LL +M+E G  P   T N+M  CLC    +  A +L+ +M  +
Sbjct: 603 SLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQK 662

Query: 424 GHEPWVKHNTLLIKELCK---HGKAMEAFRF-LTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           G  P +    LLIK  CK    G   E F   L+    +  L  ++     IGG      
Sbjct: 663 GISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGG-----E 717

Query: 480 VDLALELFRDICAHGCCPDV--VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           V  A ELF    A   C D+    YN +I  LCK + +  A D+ ++MI KG     A++
Sbjct: 718 VSEAKELFD--AALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASF 775

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKES 565
             +I+G  K G    A     RM++  S
Sbjct: 776 MPVIDGLGKRGKKHDADELAERMMDMAS 803


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/564 (26%), Positives = 255/564 (45%), Gaps = 56/564 (9%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M D     D +T   LL+  C S Q +KA  +   + + G V D+ +++ L+  +SK  +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
             +A + +  M   +      T+  ++ G  K  R   A++L D+M   G + +   Y+V
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           I+ GLC+ ++L+ A ++  EM   G  PD                               
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPD------------------------------- 149

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              +  NS ++ L     +D+A   L  M                    V+P+  S+  +
Sbjct: 150 --VVTYNSFIKGLCKCDRVDEARKFLARM-------------------PVTPDVVSYTTV 188

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN L K G LD A  +  +MT  GC  +V  Y++LIDG C    +E +  LL  M + G 
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P     NS+   L R   +  A +++ +M  +G  P V      I  LCK  +  +A  
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               MV+ G  P+   YS  +  L   K +D A+ L           D++ Y +++ GLC
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368

Query: 511 KAQRVAEAEDLFNEMITKGLI-PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           K  R  EA  LF++++ + +  P V  YN++++  CK   ID+A+    +MLE+     +
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC--CN 426

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+T+  L+ GLC+  R  DA  +   M ++G  P+ +T+  L+  +CKC +  AAL  F 
Sbjct: 427 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 486

Query: 630 MMKEKGMKPDMFVFVALISAFLSE 653
              + G  PD+  + ALI+  + E
Sbjct: 487 EAVKGGCVPDVVTYSALITGLVHE 510



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 213/464 (45%), Gaps = 54/464 (11%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           DA  + +++ GLC++ QLE A QL   MK  G  PD  I + LI+  S   +        
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG------ 62

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                                      QA+  L  M+K   +                P 
Sbjct: 63  ---------------------------QAFKFLAEMVKNHCL----------------PT 79

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  I++ L K G+   A+ L  EM   GC  N++ YN +++GLC   +L+E+ ++L 
Sbjct: 80  VVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLE 139

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G+ P   T NS  + LC+   V  A   + +M V    P V   T +I  LCK G
Sbjct: 140 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSG 196

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
               A R L  M   G  PD+V YS+ I G      V+ A+ L   +   GC P++VAYN
Sbjct: 197 DLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++  L +   + +AED+  EM  +G  P V +YN  I+G CK+  + +A     RM+E+
Sbjct: 257 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +P+  +Y+ L++ LC     DDAI L  +  EK    + + +  L+ GLCK  R   
Sbjct: 317 -GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDE 375

Query: 624 ALVHF-RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F +++ EK  +PD+F +  ++ +         A ++ K+M
Sbjct: 376 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/635 (24%), Positives = 272/635 (42%), Gaps = 63/635 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S  S+A+          ++VK+ C  +      ++  L   G  ++A  L D+++ +G
Sbjct: 51  LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG 110

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C PN Y+YN ++E LC+   +D  +  L+EM   G+  D  T    ++  C   + D+A
Sbjct: 111 -CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA 169

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
                 +      D   ++ ++    K G++D A  ++++M +     +  T+  LI GF
Sbjct: 170 RKFLARM--PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K   V++A+ L D M K G   +   Y+ ++G L +   +  A  +  EM+  G TPD 
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD- 286

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                                                    ++  N  ID        + 
Sbjct: 287 -----------------------------------------VVSYNACID-------GLC 298

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K E +         + +   +PN SS+ +++  L K  +LD A++L  +  +   + ++ 
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 361 LYNNLIDGLCNSNRLEESYELLRE-MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           LY  L+DGLC   R +E+  L  + ++E   +P  F  N M    C+R+ +  AL + ++
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +     V  N +L+  LC   +  +A   L  MV EGF+PD V Y   +  +    +
Sbjct: 419 MLERNCCNVVTWN-ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              ALELF +    GC PDVV Y+ +I+GL       EA  LF ++        VA +N 
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNA 530

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG-LCIAGRPDDAIMLWNEMEE 598
           +I G+ ++G+ D  +     ++E +   P+  T+   I G L  A     A  L++   +
Sbjct: 531 MILGYAENGSGDLGLKLFVELIESDV-EPNARTFGKEISGKLVKAESLGKARGLFDRAVK 589

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            G  P+      LI    KC     A   F  MK+
Sbjct: 590 GGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIA 583
           MI K   P   T+ +L+ G C+S  +++A   L RM  KE G  PD   Y  LI G   A
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRM--KEMGCVPDDAIYNALISGYSKA 58

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
                A     EM +  C P  +T+  ++ GLCK  R + A+     M++KG  P+++ +
Sbjct: 59  KDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY 118

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             ++     E     A ++L+EM
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEM 141


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 180/706 (25%), Positives = 317/706 (44%), Gaps = 97/706 (13%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G + EA  +  ++  EG C P+  +Y  L++ALC +  +D  +   ++M+   
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   LL  + ++   D     ++E+   G V + V F+IL+ A  K G   +A 
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           + ++ M D  I  N  T+  LI G ++  R+D AL+LF  M   G    A  Y V I   
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--T 273
            K+     AL+ + +MK  GI P+    +  + S +  G      +  +  +D+  +  +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKG--EP--------------------------- 304
           +  N +M+     G ID+A  LL  M++   EP                           
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563

Query: 305 ----------------IADVG-----VEMLMIFKGTVS----PNTSSFDIIINTLLKDGK 339
                           +A +G      E + +F+G V     PNT +F+ + + L K+ +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL-- 397
           + LAL +  +M  +GC+ +VF YN +I GL  + +++E+     +M++  + P   TL  
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCT 682

Query: 398 -------------------NSMFRCLCRR-----QDVVGAL-------NLVR-KMRVQGH 425
                              N ++ C  +      +D++G++       N V    R+  +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742

Query: 426 EPWVKHNTLL---IKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVD 481
                 +++L   I+  CKH     A        ++ G  P +  Y+  IGGL++   ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +A ++F  + + GC PDV  YN ++    K+ ++ E  +L+ EM T     +  T+N++I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G  K+GN+D A+     ++     SP   TY  LIDGL  +GR  +A  L+  M + GC
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            PN   +  LI G  K     AA   F+ M ++G++PD+  +  L+
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 173/637 (27%), Positives = 283/637 (44%), Gaps = 36/637 (5%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L   G   EA  +F  +K  GL VP++ +YN +++   K   +D     L EM + G   
Sbjct: 478  LAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     + + D+A  +F  + +       V ++ LL    K G++ +A EL 
Sbjct: 537  DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M       N  TF  L     K   V  AL++  KM   G   D   Y+ II GL KN
Sbjct: 597  EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656

Query: 219  KQLEMALQLYSEMKGSGITPDF--------------------EILSKLITSCSDEGELTL 258
             Q++ A+  + +MK   + PDF                    +I++  + +C+D+     
Sbjct: 657  GQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715

Query: 259  ---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE-PIADVGVEMLM 314
               L+  I  +  ++       S    LV+NG      ++L  +I+      +V     +
Sbjct: 716  WEDLIGSILAEAGIDNAV----SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771

Query: 315  IFKGT----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
              K T    V P   +++++I  LL+   +++A  +F ++   GC+ +V  YN L+D   
Sbjct: 772  FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK-MRVQGHEPWV 429
             S +++E +EL +EM     +    T N +   L +  +V  AL+L    M  +   P  
Sbjct: 832  KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891

Query: 430  KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                 LI  L K G+  EA +    M+  G  P+   Y+  I G       D A  LF+ 
Sbjct: 892  CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951

Query: 490  ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +   G  PD+  Y++++  LC   RV E    F E+   GL P V  YNL+ING  KS  
Sbjct: 952  MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011

Query: 550  IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
            +++A++  + M      +PD+ TY +LI  L IAG  ++A  ++NE++  G  PN  TF 
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071

Query: 610  ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            ALI G     +P  A   ++ M   G  P+   +  L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 167/669 (24%), Positives = 308/669 (46%), Gaps = 34/669 (5%)

Query: 28   MSPGALGFL--IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A  ++  I   G  G    A   F+++K +G+  PN  + N  L +L K+      
Sbjct: 429  VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREA 487

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            +     ++D G   D  T   +++ Y   G+ D+A+ + +E++++G   D  V + L+  
Sbjct: 488  KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              K   VD+A ++  RM +  ++    T+  L+ G  K  ++ +A++LF+ M + G   +
Sbjct: 548  LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT------- 257
               ++ +   LCKN ++ +AL++  +M   G  PD    + +I      G++        
Sbjct: 608  TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667

Query: 258  LLVKEIWEDRDVNTMTLLCNSIMRILVSNGS----------IDQAYNLLQAMIKGEPIAD 307
             + K ++ D  V   TLL   +   L+ +             DQ  NL    + G  +A+
Sbjct: 668  QMKKLVYPDF-VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726

Query: 308  VGVEMLMIF------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVF 360
             G++  + F       G      S    II    K   +  A +LF + T+ +G    + 
Sbjct: 727  AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             YN LI GL  ++ +E + ++  +++ +G  P   T N +     +   +     L ++M
Sbjct: 787  TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKR 479
                 E     + ++I  L K G   +A     D++ +  F P    Y   I GL    R
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906

Query: 480  VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            +  A +LF  +  +GC P+   YNI+I+G  KA     A  LF  M+ +G+ P + TY++
Sbjct: 907  LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966

Query: 540  LINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME- 597
            L++  C  G +D+ +     +  KESG +PDV+ Y  +I+GL  + R ++A++L+NEM+ 
Sbjct: 967  LVDCLCMVGRVDEGLHYFKEL--KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024

Query: 598  EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
             +G  P+  T+ +LI  L        A   +  ++  G++P++F F ALI  +     P 
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084

Query: 658  LAFEVLKEM 666
             A+ V + M
Sbjct: 1085 HAYAVYQTM 1093



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 159/623 (25%), Positives = 276/623 (44%), Gaps = 67/623 (10%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +++  L   G +EE   +FD +++  +    N +Y  + ++L     +      L++M++
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTN-TYLTIFKSLSVKGGLKQAPYALRKMRE 181

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDK 153
           +G+  + Y+   L+ +   S    +A+ V+  +I  G+      +S L+V   K  ++D 
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
              L++ M+   ++ N  TF + I    +  ++++A ++  +M   G   D   Y V+I 
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED------- 266
            LC  ++L+ A +++ +MK     PD      L+   SD  +L   VK+ W +       
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHV 360

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            DV T T+L ++    L   G+  +A++ L  M       D G          + PN  +
Sbjct: 361 PDVVTFTILVDA----LCKAGNFGEAFDTLDVM------RDQG----------ILPNLHT 400

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I  LL+  +LD AL LF  M                                   E
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNM-----------------------------------E 425

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G KPT +T         +  D V AL    KM+ +G  P +      +  L K G+  
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA +    +   G +PD V Y+  +     +  +D A++L  ++  +GC PDV+  N +I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + L KA RV EA  +F  M    L P+V TYN L+ G  K+G I +A+     M++K   
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GC 604

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+ IT+ TL D LC       A+ +  +M + GC P+  T+  +I GL K  + + A+ 
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664

Query: 627 HFRMMKEKGMKPDMFVFVALISA 649
            F  MK K + PD      L+  
Sbjct: 665 FFHQMK-KLVYPDFVTLCTLLPG 686



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 234/550 (42%), Gaps = 61/550 (11%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+  LG  G ++EA  LF+ + ++G C PN  ++N L + LCK+  V L    L +M D 
Sbjct: 579  LLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK-------- 147
            G   D +T   ++     +GQ  +A+  F+++    + D      LL    K        
Sbjct: 638  GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY 697

Query: 148  ------------------WGE----------VDKACELIERMDDCNI-RLNEKTFCVLIH 178
                              W +          +D A    ER+    I R  +     +I 
Sbjct: 698  KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757

Query: 179  GFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
               K + V  A  LF+K TK  G       Y+++IGGL +   +E+A  ++ ++K +G  
Sbjct: 758  YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817

Query: 238  PDFEILSKLITSCSDEG---ELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAY 293
            PD    + L+ +    G   EL  L KE+     + NT+T   N ++  LV  G++D A 
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH--NIVISGLVKAGNVDDAL 875

Query: 294  NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +L   ++                    SP   ++  +I+ L K G+L  A  LF  M   
Sbjct: 876  DLYYDLMSDRDF---------------SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920

Query: 354  GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            GC  N  +YN LI+G   +   + +  L + M + G +P   T + +  CLC    V   
Sbjct: 921  GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980

Query: 414  LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLPDIVCYSAAIG 472
            L+  ++++  G  P V    L+I  L K  +  EA     +M    G  PD+  Y++ I 
Sbjct: 981  LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040

Query: 473  GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
             L     V+ A +++ +I   G  P+V  +N +I G   + +   A  ++  M+T G  P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100

Query: 533  SVATYNLLIN 542
            +  TY  L N
Sbjct: 1101 NTGTYEQLPN 1110



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 40/360 (11%)

Query: 311 EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           EM  +F    K  +  +T+++  I  +L   G L  A    R+M + G + N + YN LI
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             L  S    E+ E+ R M   GF+P+  T +S+   L +R+D+   + L+++M   G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V   T+ I+ L + GK  EA+  L                         KR+D     
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEIL-------------------------KRMD----- 285

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
                  GC PDVV Y ++I  LC A+++  A+++F +M T    P   TY  L++ +  
Sbjct: 286 -----DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           + ++D      S M EK+   PDV+T+T L+D LC AG   +A    + M ++G  PN  
Sbjct: 341 NRDLDSVKQFWSEM-EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  LI GL +  R   AL  F  M+  G+KP  + ++  I  +    +   A E  ++M
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 230/504 (45%), Gaps = 63/504 (12%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +  +L++A+ K  E+  A E   R  D   +L+  +   L+   VK++++     ++ +M
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM 191

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            K    ++   +++ I GLC+  +L  A     +MK  GI+P+    + L+      G  
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG-- 249

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                                       S G + +A   ++ M+  +             
Sbjct: 250 ----------------------------SAGKMYKAEAFMKEMLANK------------- 268

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  +F+ +I+   KD  +  A   F EM + G   N+  YN+LI+GLCN+ +LE
Sbjct: 269 ---ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ +L  +M   G KP   T N++    C+++ +  A  +   +  Q   P V     +I
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK G   E F   + M+ EG LP++  Y+  I GL   + +  A EL  ++   G  
Sbjct: 386 DAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLK 445

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            DVV YNI+I GLCK  +   AE L NEM   GL P+  TYN L++G+C  G +  A+  
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +RM EKE   P+V+TY  LI G C   + + A  L NEM EKG  PNR T+        
Sbjct: 506 RTRM-EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY-------- 556

Query: 617 KCDRPRAALVHFRMMKEKGMKPDM 640
                   +V   M+ EKG  PD+
Sbjct: 557 -------DIVRLEML-EKGFSPDI 572



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 185/360 (51%), Gaps = 6/360 (1%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL A++K   I DV      + K  +  N ++F+I IN L + GKL+ A     +M   G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 355 CMQNVFLYNNLIDGLC---NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
              NV  YN L+DG C   ++ ++ ++   ++EM  +   P   T N++    C+ ++V 
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A     +M+ QG +P +     LI  LC +GK  EA      MV  G  P+IV Y+A I
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    K +  A ++F D+      P+V+ +N +I   CK   + E   L + M+ +G++
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P+V+TYN LI G C+  ++  A   L+ M E +    DV+TY  LIDGLC   +  +A  
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEM-ENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAF 650
           L NEM   G  PN +T+  L+ G C   + +AAL V  RM KE+  +P++  +  LI  +
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER-KQPNVVTYNVLIKGY 528



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 12/452 (2%)

Query: 223 MALQLYSEMKGS-GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CNSI 279
           ++ Q +SE+K    +T     L +L+ +  D  EL L   + W  ++      L   + +
Sbjct: 27  LSKQHWSELKPHLRVTKPATFLDQLLNAGVD-SELVLRFFK-WSQKEYRLSYGLEPTSKV 84

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF--DIIINTLLKD 337
           +  L ++    +  + L + +K E      V   ++  G   P  ++   D+++   +K+
Sbjct: 85  LHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGG-RPGATALIIDMLVLAYVKN 143

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            +L  A   F      G   ++   N L+  L   N++ +   + +EM +        T 
Sbjct: 144 LELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTF 203

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR---FLTD 454
           N     LCR   +  A + +  M+  G  P V     L+   CK G A + ++   F+ +
Sbjct: 204 NIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKE 263

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+     P+ V ++  I G    + V  A + F ++   G  P++V YN +I+GLC   +
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK 323

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA DL+++M+  GL P++ TYN LING+CK   + +A       + K+   P+VIT+ 
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD-VSKQELVPNVITFN 382

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T+ID  C  G  ++   L + M ++G  PN  T+  LI GLC+    +AA      M+ K
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+K D+  +  LI           A ++L EM
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM 474



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 191/431 (44%), Gaps = 62/431 (14%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N  +  LC++  ++  E  +++M+ +G   +  T   L+  YC  G            
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS----------- 250

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                                G++ KA   ++ M    I  NE TF  LI GF K   V 
Sbjct: 251 --------------------AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            A + F++M K G   +   Y+ +I GLC N +LE A+ L+ +M G G+ P+    + LI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 248 TS-CSDE--GELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
              C  +   E T +  ++ +   V N +T   N+++      G +++ ++L  +M+   
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITF--NTMIDAYCKEGMMEEGFSLCSSML--- 405

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
              D G          + PN S+++ +I  L +   L  A  L  EM   G   +V  YN
Sbjct: 406 ---DEG----------ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LIDGLC +++   + +LL EM   G KP H T N++    C    +  ALN+  +M  +
Sbjct: 453 ILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKE 512

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             +P V    +LIK  CK  K   A   L +M+++G  P+   Y        DI R+++ 
Sbjct: 513 RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY--------DIVRLEML 564

Query: 484 LELFR-DICAH 493
            + F  DI  H
Sbjct: 565 EKGFSPDIEGH 575



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 173/401 (43%), Gaps = 25/401 (6%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L +  +I  +  + ++++K R   +       I  L   G + +A    + +K  G+ 
Sbjct: 173 SALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGIS 232

Query: 63  VPNNYSYNCLLEALCKSCSVDLV---EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
            PN  +YN L++  CK  S   +   E  +KEM       ++ T   L+  +C       
Sbjct: 233 -PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAA 291

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A   F E+   G     V ++ L+      G++++A +L ++M    ++ N  T+  LI+
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN 351

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF KK  + +A ++FD ++K     +   ++ +I   CK   +E    L S M   GI P
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILP 411

Query: 239 DFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           +    + LI     + +L     L+ E+ E++ +    +  N ++  L  N     A  L
Sbjct: 412 NVSTYNCLIAGLCRKQDLQAAKELLNEM-ENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M                F   + PN  +++ +++    +GKL  AL++   M +   
Sbjct: 471 LNEM----------------FNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             NV  YN LI G C  N+LE +  LL EM E G  P   T
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 167/658 (25%), Positives = 285/658 (43%), Gaps = 64/658 (9%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN L+     S   D     ++ M+  G   +  T T L+  YC     D+A S++  ++
Sbjct: 225 YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMV 284

Query: 129 DHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             G + + V  S L+    + G+  +A  L   MD   +  N  T+C LI    K  R  
Sbjct: 285 RSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGS 344

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           ++L L  +M   G   D  MY  ++  L K  ++E A  +    +   ITP+F   + L+
Sbjct: 345 ESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLV 404

Query: 248 TS-CS----DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + C     D  E  LL     E++ V    +  +SI+  LV  G + +A + ++ M   
Sbjct: 405 DAHCRAGNIDGAEQVLLQ---MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDS 461

Query: 303 EPIADVGVEMLMI-----FKGT--------------VSPNTSSFDIIINTLLKDGKLDLA 343
               +V     +I     F+G               V  N    D ++N L K+G ++ A
Sbjct: 462 GIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGA 521

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            +LF++M + G + +   Y  L+DGL  +  +  ++++ +E+ E    P     N    C
Sbjct: 522 EALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC 581

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC       A + +++MR  G EP       +I   C+ GK  +A + L +M +    P+
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641

Query: 464 IVCYSAAIGGLIDI-----------------------------------KRVDLALELFR 488
           ++ Y+  + GL++                                    +R D+ LE+  
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHE 701

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   D+  YN ++  LC       A  + +EM+T+G+ P   T+N LI G CKS 
Sbjct: 702 LMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           ++D A    ++ML  +  SP++ T+ TL+ GL  AGR  +A  + ++M++ G  PN +T+
Sbjct: 762 HLDNAFAIYAQMLH-QGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L+TG  K      AL  +  M  KG  P    + +L+S F        A E+  EM
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 262/581 (45%), Gaps = 25/581 (4%)

Query: 75  ALCKSCSVDLV--EMRLKEMQDYGWGYDKYTL---TPLLQVYCNSGQFDKALSVFNEIID 129
           AL   C   LV     L EM   G G D   +     L+  YC       AL+V   +  
Sbjct: 156 ALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTT 215

Query: 130 HG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G  +D   ++ L+  F   G+ D A E++ERM    +  N  T+  LI  + K   +D+
Sbjct: 216 QGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDE 275

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  L++ M +SG   D      ++ GLC++ Q   A  L+ EM   G+ P+      LI 
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID 335

Query: 249 SCSD--EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           S +    G  +L +      R V    ++  ++M  L   G I++A ++L+        +
Sbjct: 336 SLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR-----HAQS 390

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D            ++PN  ++ ++++   + G +D A  +  +M +   + NV  ++++I
Sbjct: 391 D-----------NITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSII 439

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +GL     L ++ + +R+M++SG  P   T  ++     + Q    AL++ R M  +G E
Sbjct: 440 NGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE 499

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                   L+  L K+G    A     DM + G L D V Y+  + GL     +  A ++
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            +++      PD V YN+ I+ LC   + +EA+    EM   GL P  ATYN +I   C+
Sbjct: 560 GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR 619

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G   +A+  L  M ++ S  P++ITYTTL+ GL  AG    A  L NEM   G AP  +
Sbjct: 620 EGKTSKALKLLKEM-KRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSL 678

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           T   ++       RP   L    +M   G+  D+ V+  L+
Sbjct: 679 THQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLV 719



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 168/660 (25%), Positives = 296/660 (44%), Gaps = 32/660 (4%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + +V+S        L  L+  L   G   EA  LF ++ + G+  PN+ +Y  L+++L
Sbjct: 279 LYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVA-PNHVTYCTLIDSL 337

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K+         L EM   G   D    T L+      G+ ++A  V             
Sbjct: 338 AKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNF 397

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           V +++L+ A  + G +D A +++ +M++ ++  N  TF  +I+G VK+  + KA     K
Sbjct: 398 VTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRK 457

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M  SG A +   Y  +I G  K +  E AL +Y +M   G+  +  ++  L+      G 
Sbjct: 458 MKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGN 517

Query: 256 LTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           +    + +++D D   + L      ++M  L   G++  A+ + Q +++     D  V  
Sbjct: 518 IEG-AEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYN 576

Query: 313 LMI------------------FKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           + I                   + T + P+ ++++ +I    ++GK   AL L +EM + 
Sbjct: 577 VFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC--RRQDVV 411
               N+  Y  L+ GL  +  ++++  LL EM  +GF PT  T   + +     RR DV+
Sbjct: 637 SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI 696

Query: 412 GALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             L +   M   G H     +NTL +  LC HG A  A   L +M+  G  PD + ++A 
Sbjct: 697 --LEIHELMMGAGLHADITVYNTL-VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G      +D A  ++  +   G  P++  +N ++ GL  A R+ EA+ + ++M   GL
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGL 813

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+  TY++L+ G+ K  N  +A+     M+ K    P   TY +L+     AG  + A 
Sbjct: 814 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK-GFIPKASTYNSLMSDFAKAGMMNQAK 872

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L++EM+ +G      T+  L+ G  K        +  + MKE G KP      ++  AF
Sbjct: 873 ELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAF 932



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 216/489 (44%), Gaps = 61/489 (12%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-FEILSKLITSCSDE--GELTL 258
           A+D   Y++ +  L +     +A  + SEM   G++ D   + + L+  C     GE   
Sbjct: 112 AADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAA 171

Query: 259 LVKEIWEDRDVNTMTLLC-NSIM-----------------RILVSNGSID-QAYNLLQAM 299
           L + +   R ++ + ++  N+++                 R+     ++D   YN L A 
Sbjct: 172 LAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAG 231

Query: 300 IKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                 AD  +E++   K   V PN  ++  +I    K   +D A SL+  M + G + +
Sbjct: 232 FFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPD 291

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V   + L+DGLC   +  E+Y L REM++ G  P H T  +                   
Sbjct: 292 VVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT------------------- 332

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
                           LI  L K  +  E+   L +MV  G + D+V Y+A +  L    
Sbjct: 333 ----------------LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEG 376

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +++ A ++ R   +    P+ V Y +++   C+A  +  AE +  +M  K +IP+V T++
Sbjct: 377 KIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFS 436

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            +ING  K G + +A   + +M  K+SG +P+V+TY TLIDG       + A+ ++ +M 
Sbjct: 437 SIINGLVKRGCLGKAADYMRKM--KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
            +G   N     +L+ GL K      A   F+ M E+G+  D   +  L+       N P
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554

Query: 658 LAFEVLKEM 666
            AF+V +E+
Sbjct: 555 AAFKVGQEL 563


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 160/626 (25%), Positives = 288/626 (46%), Gaps = 30/626 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQD 94
           LI C   +G ++     F  + + G  + N   +  LL+ LC +  VD   ++ L+ M +
Sbjct: 98  LIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPE 157

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH----VFSILLVAFSKWGE 150
           +G   +  +   LL+  CN  + ++AL + + + D G          ++ ++    K   
Sbjct: 158 FGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQM 217

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VD+A  + + M D  +R N  T+  LIHG++   +  + +Q+  +M+  G   D  +Y V
Sbjct: 218 VDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAV 277

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++  LCKN +   A  ++  +   GI P   I   L+   + EG L+ +           
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEM----------- 326

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTSS 326
                 +S + ++V NG +   +++   M        +  E + IF    +  +SP   +
Sbjct: 327 ------HSFLDLMVRNG-VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+ L K G++D A+  F +M   G   ++F++++L+ GLC  ++ E++ +L  E+ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKA 445
           + G +      N +   LCR   V+ A  L+  M RV      + +NTL +   C  G+ 
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTL-VDGHCLTGRI 498

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA + L  MV  G  PD   Y+  + G    +R+D A  LFR++   G  P VV YN I
Sbjct: 499 DEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTI 558

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           + GL +  R  EA++L+  MI       + TY +++NG C++  +D+A      +  K+ 
Sbjct: 559 LHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDL 618

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              D+ T   +I  L   GR +DA+ L+  +   G  P+  T+  +   L K        
Sbjct: 619 -QLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELD 677

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFL 651
             F  M+E G  P+  +  AL+   L
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLL 703



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 169/657 (25%), Positives = 282/657 (42%), Gaps = 71/657 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQV---KREGL 61
           +SR+RR+             RC      +    R  GS+GL ++A  LFD++    R   
Sbjct: 1   MSRSRRVT--------AAADRCLELERVIAGRARS-GSLGL-DDALKLFDEMLTYARPAS 50

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEM--RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
               N     +  A C S S  +V +  R+             T T L+  +C  G+   
Sbjct: 51  VRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKH 110

Query: 120 ALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACE-LIERMDDCNIRLNEKTFCVL 176
             + F  I+  GW   +  +F  LL        VD+A + L+ RM +    LN  ++ +L
Sbjct: 111 GFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNIL 170

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFAS---DAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
           + G   + R ++AL+L   M   G  S   +   Y  +I GLCK + ++ A  ++  M  
Sbjct: 171 LKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID 230

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            G+ P                               N  T  C  ++   +S G   +  
Sbjct: 231 KGVRP-------------------------------NNHTYTC--LIHGYLSTGKWKEVV 257

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +LQ M      +  G++          P+   + ++++ L K+G+   A ++F  + + 
Sbjct: 258 QMLQEM------STHGLQ----------PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRK 301

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V +Y  L+ G      L E +  L  M  +G  P H   N MF    ++  +  A
Sbjct: 302 GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEA 361

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           +++  KMR Q   P V +   LI  LCK G+  +A      M+ EG  PDI  +S+ + G
Sbjct: 362 MHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYG 421

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L  + + + A +LF ++   G   +   +NI++  LC+  RV EA+ L + M+   + P 
Sbjct: 422 LCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPD 481

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V +YN L++G C +G ID+A   L  M+      PD  TY TL+ G C A R DDA  L+
Sbjct: 482 VISYNTLVDGHCLTGRIDEAAKLLDVMVSI-GLKPDEFTYNTLLHGYCKARRIDDAYSLF 540

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            EM  KG  P  +T+  ++ GL +  R   A   +  M     K D++ +  +++  
Sbjct: 541 REMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGL 597



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 241/523 (46%), Gaps = 22/523 (4%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F  +  +G+  PNN++Y CL+     +     V   L+EM  +G   D    
Sbjct: 217 MVDRAKGVFQHMIDKGV-RPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIY 275

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMD 162
             LL   C +G+  +A ++F+ +I  G +  HV  + ILL  ++  G + +    ++ M 
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSLIRKG-IKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  +   F ++ + + KK+ +D+A+ +FDKM +   +     Y  +I  LCK  +++
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVD 394

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A+  +++M   G+TPD  + S L+       +     K  +E  D+ +       N +M
Sbjct: 395 DAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILM 454

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G + +A  L+  M++ +                V P+  S++ +++     G++
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVD----------------VRPDVISYNTLVDGHCLTGRI 498

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  L   M  IG   + F YN L+ G C + R++++Y L REM   G  P   T N++
Sbjct: 499 DEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTI 558

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L +      A  L   M     +  +   T+++  LC++    EAF+    +  +  
Sbjct: 559 LHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDL 618

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI   +  IG L+   R + A++LF  I A+G  PDV  Y +I   L K   + E ++
Sbjct: 619 QLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDE 678

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           LF+ M   G  P+    N L+      G+I +A + LS++ EK
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEK 721


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 244/534 (45%), Gaps = 23/534 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S LL+  S+ G      +   RM    ++ N   +  +I+   K   V  A  +  K+
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +S  + D   Y  +I G C+   L+ ALQ++++M   G  P+    S LI    D G +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 257 TL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                L++E+     + T    C   +  L   G  + A+ L   M       + G E  
Sbjct: 302 NEAFDLIREMILHGILPTAHT-CTGPIIALCDMGCYEDAWRLFVDM------KNKGCE-- 352

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   PN  ++  +I+ L   G L +A+ LF  M++ G   N   YN LI+ L  + 
Sbjct: 353 --------PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHN 432
           R++ ++ +L  M  +G  P   T N M +  C   D   A+ ++  M  +GH    V +N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T+ IK  C  G    A R L  M   G  PD   Y+  I G   I +++ A  LF ++  
Sbjct: 465 TI-IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G CP+ V Y  +I G CK +++  A  L   M   G  P+V TYN+LI+G  K  N   
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A      M+E E   P+V+TYT +IDGLC  G    A+ ++N+M E+GC PN +T+ +LI
Sbjct: 584 AEELCKVMIE-EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L +  +   A   F  ++  G+ PD   +V +I A++       AF  L  M
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 249/523 (47%), Gaps = 27/523 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +++ ++ A  K G V  A  +++++ +  +  +  T+  +I G  +K  +D ALQ+F++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K G   +   Y  +I GLC + ++  A  L  EM   GI P     +  I +  D G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 255 ----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                L + +K    + +V T T L +     L  +G +  A  L   M           
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISG----LCVSGLLKVAIGLFHRM----------- 381

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +  V PNT +++ +IN L+++ ++  A  +   M + GC  N+  YN +I G C
Sbjct: 382 -----SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
                +++  ++  M + G      T N++ +  C   +   AL ++  MR  G +P   
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   CK  K   AF    +MV +G  P+ V Y+A I G    +++D A  L   +
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+V  YN++I GL K    + AE+L   MI +G+ P+V TY  +I+G CK+G+ 
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+   ++M+E +   P+++TY++LI  L   G+ ++A  L+ E+E  G  P+ IT++ 
Sbjct: 617 SLALEMFNKMIE-QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I       +   A      M + G +P ++ +  LI    +E
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 297/684 (43%), Gaps = 45/684 (6%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           AR ++ L +L+Q  ++   F    A   L+  L  +G+       + ++  EG+  PN  
Sbjct: 162 ARTMSFLDMLSQSGLRMGLF----AYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLL 216

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            YN ++ ALCK  +V   E  +K++ +     D +T T ++  +C     D AL VFN++
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G     V +S L+      G V++A +LI  M    I     T    I         
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A +LF  M   G   +   Y  +I GLC +  L++A+ L+  M   G+ P+    + L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I          +LV    E+R +    ++ N + R   S   +     +    I G+P  
Sbjct: 397 I---------NILV----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
            + V   M+ +G  S N  +++ II      G    AL +   M   GC  + + Y  LI
Sbjct: 444 AMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G C  +++E ++ L  EM + G  P   T  ++    C+ + +  A +L+  M+  G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V+   +LI  L K      A      M++EG  P++V Y+A I GL       LALE+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   GC P+++ Y+ +I  L +  +V EAE+LF E+   GLIP   TY  +I  +  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC---------IAGRPD---------- 587
           SG ++ A   L RM+ K    P + TY  LI GL          +A  PD          
Sbjct: 683 SGKVEHAFNFLGRMI-KAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 588 ----DAIMLWN-EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               DA+ + + ++ E     +     AL++ L    R   A      M  +G+ PD   
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + +L+ + L   N  LA  V K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 169/678 (24%), Positives = 277/678 (40%), Gaps = 50/678 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G V +A  +  +V  E    P+ ++Y  ++   C+   +D       +M   
Sbjct: 221 VINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T + L+   C+SG+ ++A  +  E+I HG +   H  +  ++A    G  + A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   M +     N  T+  LI G      +  A+ LF +M++ G   +   Y+ +I  
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
           L +N++++ A  + + M  +G +P+    +++I      G+    +LV      R  +  
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD--------------------VGVEM 312
            +  N+I++    +G+   A  +L  M  G    D                     G+  
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+  G + PN  ++  +I+   KD KLD A SL   M + GC  NV  YN LI GL   
Sbjct: 520 EMVDDG-LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N    + EL + M E G  P   T  +M   LC+      AL +  KM  QG  P +   
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + LI+ L + GK  EA     ++ + G +PD + Y   I   I   +V+ A      +  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 493 HGCCPDVVAYNIIISGL-----CKAQRVAEAEDL-----FNEMITKG------------L 530
            GC P +  Y ++I GL        QR+A   D+     F    T              L
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 531 IP--SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            P  SV   N L++    +G   +A   L  M+  +   PD   Y +L+  L      D 
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS-QGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+ ++  M  +GC  +   +  LI  LC+  R + A + F  M  +   PD  V   LI 
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 649 AFLSELNPPLAFEVLKEM 666
             L +    L  E L  M
Sbjct: 878 GLLRDGYKDLCMEFLHIM 895



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 253/572 (44%), Gaps = 53/572 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   GL++ A  LF ++ R+G+  PN  +YN L+  L ++  +    + L  M   
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   +++ YC  G   KA+ V N ++  G     V ++ ++  +   G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M D   + +E ++  LI GF K S+++ A  LF++M   G   +   Y  +I G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED---RD 268
            CK+++L+ A  L   MK SG  P+ +  + LI   + +   +    L K + E+    +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T + +     L  NGS   A  +   MI+               +G + PN  ++ 
Sbjct: 600 VVTYTAMIDG----LCKNGSTSLALEMFNKMIE---------------QGCL-PNLLTYS 639

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L ++GK++ A +LF E+ + G + +   Y  +I+    S ++E ++  L  M ++
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 389 GFKPTHFTLNSMFRCLCRR-----------QDVVGALNL-----------VRKMRVQGHE 426
           G +PT +T   + + L               DVV   +            V   ++   +
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 427 PW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           P   V+    L+  L   G+  EA   L  M+ +G  PD   Y++ +  L+ ++ VDLA+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM 819

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +F+ +   GC   +  Y  +I  LC+  R  EA   F  M+ +   P      +LI+G 
Sbjct: 820 GVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGL 879

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            + G  D  M  L  ++E     P    YT L
Sbjct: 880 LRDGYKDLCMEFL-HIMETRRYMPSFHIYTIL 910



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 44/530 (8%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           +IL   RRI    V+   + ++ C  SP  + +  +I+    +G  ++A ++ + + + G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGC--SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
               N  +YN +++  C S +       L  M+D G   D+++ T L+  +C   + + A
Sbjct: 456 HSA-NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +FNE++D G   +E  ++ L+  + K  ++D A  L+E M     R N +T+ VLIHG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K++    A +L   M + G   +   Y  +I GLCKN    +AL+++++M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               S LI +   EG   E   L  E+ E   +    +    ++   + +G ++ A+N L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 297 QAMIK----------GEPIADVGVEMLMIFK-----GTVSPN------TSSFDIIINTLL 335
             MIK          G  I  +  E L+  +       V PN      T+  D +     
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K  +LD  LS             V + N L+  L  + R  E+ ELL  M   G  P   
Sbjct: 754 KLAELDPGLS-------------VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             NS+   L R ++V  A+ + + M  QG E  +     LI  LC+  +  EA     +M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +   + PD V  +  I GL+     DL +E    +      P    Y I+
Sbjct: 861 LMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI    +   +  +   L  + +SG +   F  +++   L R       ++   +M  +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P +     +I  LCK G   +A   +  + +    PD   Y++ I G      +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++F  +   GC P+ V Y+ +I+GLC + RV EA DL  EMI  G++P+  T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C  G  + A      M  K    P+V TYT LI GLC++G    AI L++ M   G  P
Sbjct: 330 LCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+ ALI  L +  R + A V   +M   G  P++  +  +I  +    +P  A  V+
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 664 KEM 666
             M
Sbjct: 449 NNM 451


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 166/649 (25%), Positives = 297/649 (45%), Gaps = 30/649 (4%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMR 88
           P     LI C   +G +E     F  + + G  V NN   N LL+ LC +  + + +++ 
Sbjct: 94  PCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV-NNIVINQLLKGLCDAKRLCEAMDIL 152

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW----VDEHVFSILLVA 144
           +K M + G   D  +   LL+ +CN  + ++AL + + + D        +   ++I++  
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F   G+VDKA  L   M D  I+ N  T+  +I G  K   VD+A  +F +M   G   D
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVK 261
              Y+ +I G     + +  +++  EM   G+ PD      L+    + G   E   L  
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV----------- 310
            +   + +     +   ++    + G++ + ++LL  M++     D  +           
Sbjct: 333 SMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 311 ----EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
               E + IF    +  +SP+  ++  +I+ L K G++D A+  F +M   G   N+F++
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+L+ GLC  ++ E++ E   EM   G +P     N++   LC +  V+ A  L+  M  
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P V   T LI   C  G+  EA + L  M+  G  PD   Y+  + G     R+D 
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  +FR++  +G  P VV Y+ I+ GL   +R +EA++L+  MIT G   ++  YN+++N
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G  K+  +D+A      +  K+    ++ T+  +I  L  +GR +DA+ L+  +   G  
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDF-QLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           P+  T+  +   L +          F  M++ G  P+  +  AL+   L
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 275/606 (45%), Gaps = 57/606 (9%)

Query: 52  LFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LF+++ RE      P+  +Y+ L+   C+   ++        +   GW  +   +  LL+
Sbjct: 78  LFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 110 VYCNSGQFDKALSVF-NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
             C++ +  +A+ +    + + G   + V ++ LL  F      ++A EL+  M D   R
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 168 L---NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               N  ++ ++I+GF  + +VDKA  LF +M   G   +   Y  +I GLCK + ++ A
Sbjct: 198 SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             ++ +M   G+ PD +  + LI      G+        W++            ++R+L 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK--------WKE------------VVRML- 296

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                             E ++  G++          P+  ++  ++N L  +G+   A 
Sbjct: 297 ------------------EEMSAHGLK----------PDCYTYGSLLNYLCNNGRCREAR 328

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            LF  M + G   NV +Y  LI G      L E ++LL  M E+G  P H   N +F   
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            ++  +  A+++  KM+ QG  P V +   LI  LCK G+  +A      M+ EG  P+I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             +++ + GL  + + + A E + ++   G  PDVV +N I+  LC   +V +A+ L + 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   G  P V +Y  LI G C  G ID+A   L  ML      PD  TY TL+ G C AG
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYNTLLHGYCRAG 567

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R DDA  ++ EM   G  P  +T+  ++ GL    R   A   +  M   G + +++++ 
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627

Query: 645 ALISAF 650
            +++  
Sbjct: 628 IILNGL 633



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 241/528 (45%), Gaps = 32/528 (6%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F Q+  +G+  P+N +YNCL+           V   L+EM  +G   D YT 
Sbjct: 253 VVDRAEGVFQQMIDKGV-KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTY 311

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   CN+G+  +A  +F+ +I  G   +  ++ IL+  ++  G + +  +L+  M +
Sbjct: 312 GSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  +   F ++   + KK+ +D+A+ +F+KM + G + D   Y  +I  LCK  +++ 
Sbjct: 372 NGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDD 431

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSC--------SDEGELTLLVKEIWEDRDVNTMTLL 275
           A+  +++M   G+ P+  + + L+           + E    +L + I  D  V   T+L
Sbjct: 432 AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV-VFFNTIL 490

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN     L + G + +A  L+  M +      VG            P   S+  +I    
Sbjct: 491 CN-----LCTKGQVMKAQRLIDLMER------VGTR----------PGVISYTTLIGGHC 529

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G++D A      M  +G   + + YN L+ G C + R++++Y + REM  +G  P   
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   L   +    A  L   M   G +  +    +++  L K+    EAF+    +
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             + F  +I  ++  IG L    R + A+ LF  I ++G  PDV  Y +I   L +   +
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYL 709

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            E +DLF+ M   G  P+    N L+      G+I +A   L ++ EK
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEK 757



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)

Query: 341 DLALSLFREMTQ---IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           +L +SLF  M +   I    +   Y+ LI   C   RLE  +     + +SG++  +  +
Sbjct: 73  ELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVI 132

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N + + LC  + +  A++++ K                                   M +
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKR----------------------------------MPE 158

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQR 514
            G  PD+V Y+  + G  + KR + ALEL     D     C P+VV+Y I+I+G     +
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQ 218

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V +A +LF EM+ +G+ P+V TY  +I+G CK+  +D+A     +M++K    PD  TY 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDTYN 277

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI G    G+  + + +  EM   G  P+  T+ +L+  LC   R R A   F  M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 635 GMKPDMFVFVALISAFLSE 653
           G+KP++ ++  LI  + ++
Sbjct: 338 GIKPNVAIYGILIHGYATK 356



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 170/389 (43%), Gaps = 53/389 (13%)

Query: 28  MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  +  G LI  L  +G V++A + F+Q+  EG+  PN + +N L+  LC     +  
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLVYGLCTVDKWEKA 467

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           +    EM + G   D      +L   C  GQ  KA  + + +   G     + ++ L+  
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G +D+A + ++ M    ++ +E T+  L+HG+ +  R+D A  +F +M ++G    
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  I+ GL   ++   A +LY  M  SG   +                       IW
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN-----------------------IW 624

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                     + N I+  L  N  +D+A+ L Q++       D  +E+            
Sbjct: 625 ----------IYNIILNGLSKNNCVDEAFKLFQSLCS----KDFQLEI------------ 658

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           ++F+I+I  L K G+ + A+ LF  ++  G + +VF Y  + + L     LEE  +L   
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           ME+SG  P    LN++ R L  R D+  A
Sbjct: 719 MEKSGTTPNSRMLNALVRRLLHRGDITRA 747


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 258/561 (45%), Gaps = 53/561 (9%)

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCN 165
           ++ Y   G+  +A++VF E +D    +  VFS   ++      G  D+A ++  RM D  
Sbjct: 83  MKNYGRKGKVQEAVNVF-ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +  +F + +  F K SR   AL+L + M+  G   +   Y  ++GG  +        
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +L+ +M  SG++      +KL                                 +R+L  
Sbjct: 202 ELFGKMLASGVSLCLSTFNKL---------------------------------LRVLCK 228

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G + +   LL  +IK               +G V PN  ++++ I  L + G+LD A+ 
Sbjct: 229 KGDVKECEKLLDKVIK---------------RG-VLPNLFTYNLFIQGLCQRGELDGAVR 272

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +   + + G   +V  YNNLI GLC +++ +E+   L +M   G +P  +T N++    C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  A  +V      G  P       LI  LC  G+   A     + + +G  P+++
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I GL +   +  A +L  ++   G  P+V  +NI+++GLCK   V++A+ L   M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           I+KG  P + T+N+LI+G+     ++ A+  L  ML+     PDV TY +L++GLC   +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSK 511

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            +D +  +  M EKGCAPN  TF  L+  LC+  +   AL     MK K + PD   F  
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  F    +   A+ + ++M
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 271/610 (44%), Gaps = 26/610 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           ++  G  G V+EA  +F+++     C P  +SYN ++  L  S   D        M+D G
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
              D Y+ T  ++ +C + +   AL + N +   G  ++   +  ++  F +     +  
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           EL  +M    + L   TF  L+    KK  V +  +L DK+ K G   +   Y++ I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVN 270
           C+  +L+ A+++   +   G  PD    + LI      S   E E+  L K + E  + +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV-YLGKMVNEGLEPD 320

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           + T   N+++      G +  A  +         + D       +F G V P+  ++  +
Sbjct: 321 SYTY--NTLIAGYCKGGMVQLAERI---------VGDA------VFNGFV-PDQFTYRSL 362

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L  +G+ + AL+LF E    G   NV LYN LI GL N   + E+ +L  EM E G 
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N +   LC+   V  A  LV+ M  +G+ P +    +LI       K   A  
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L  M+  G  PD+  Y++ + GL    + +  +E ++ +   GC P++  +NI++  LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           + +++ EA  L  EM  K + P   T+  LI+G+CK+G++D A     +M E    S   
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TY  +I           A  L+ EM ++   P+  T+  ++ G CK             
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662

Query: 631 MKEKGMKPDM 640
           M E G  P +
Sbjct: 663 MMENGFIPSL 672



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/620 (24%), Positives = 266/620 (42%), Gaps = 63/620 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG------- 96
           G  ++A+ ++ +++  G+  P+ YS+   +++ CK+         L  M   G       
Sbjct: 125 GYFDQAHKVYMRMRDRGI-TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183

Query: 97  ---------------WGYDKY-------------TLTPLLQVYCNSGQFDKALSVFNEII 128
                           GY+ +             T   LL+V C  G   +   + +++I
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243

Query: 129 DHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             G +     +++ +    + GE+D A  ++  + +   + +  T+  LI+G  K S+  
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A     KM   G   D+  Y+ +I G CK   +++A ++  +   +G  PD      LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363

Query: 248 TSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                EGE    +    E   + +    +L N++++ L + G I +A  L   M +    
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE---- 419

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                      KG + P   +F+I++N L K G +  A  L + M   G   ++F +N L
Sbjct: 420 -----------KGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I G     ++E + E+L  M ++G  P  +T NS+   LC+       +   + M  +G 
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +    +L++ LC++ K  EA   L +M  +   PD V +   I G      +D A  
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 486 LFRDIC-AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           LFR +  A+        YNIII    +   V  AE LF EM+ + L P   TY L+++G+
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK+GN++     L  M+E     P + T   +I+ LC+  R  +A  + + M +KG  P 
Sbjct: 648 CKTGNVNLGYKFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706

Query: 605 RITFMALITGLCKCDRPRAA 624
                  +  +C  D+   A
Sbjct: 707 A------VNTICDVDKKEVA 720



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 251/574 (43%), Gaps = 36/574 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S    +R  A LR+L  ++    C M+  A   ++          E   LF ++   G
Sbjct: 153 MKSFCKTSRPHAALRLL-NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 61  --LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
             LC+    ++N LL  LCK   V   E  L ++   G   + +T    +Q  C  G+ D
Sbjct: 212 VSLCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A+ +   +I+ G   D   ++ L+    K  +  +A   + +M +  +  +  T+  LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G+ K   V  A ++      +GF  D   Y  +I GLC   +   AL L++E  G GI 
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 238 PDFEILSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQ 291
           P+  + + LI   S++G   E   L  E+ E     +V T  +L N + ++    G +  
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM----GCVSD 444

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L++ MI                KG   P+  +F+I+I+      K++ AL +   M 
Sbjct: 445 ADGLVKVMIS---------------KGYF-PDIFTFNILIHGYSTQLKMENALEILDVML 488

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +V+ YN+L++GLC +++ E+  E  + M E G  P  FT N +   LCR + + 
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL--PDIVCYSA 469
            AL L+ +M+ +   P       LI   CK+G    A+     M +E +        Y+ 
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPTYNI 607

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I    +   V +A +LF+++      PD   Y +++ G CK   V        EM+  G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            IPS+ T   +IN  C    + +A   + RM++K
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 46/315 (14%)

Query: 377 ESYELLREM-EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH---- 431
           ++ E+   M +E GFK T     S +R +  +    G    + ++ V   E    H    
Sbjct: 22  KALEMFNSMRKEVGFKHTL----STYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG 77

Query: 432 -NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                +K   + GK  EA      M      P +  Y+A +  L+D    D A +++  +
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRV----------------------------------- 515
              G  PDV ++ I +   CK  R                                    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           AE  +LF +M+  G+   ++T+N L+   CK G++ +    L +++ K    P++ TY  
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI-KRGVLPNLFTYNL 256

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            I GLC  G  D A+ +   + E+G  P+ IT+  LI GLCK  + + A V+   M  +G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316

Query: 636 MKPDMFVFVALISAF 650
           ++PD + +  LI+ +
Sbjct: 317 LEPDSYTYNTLIAGY 331


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 170/660 (25%), Positives = 293/660 (44%), Gaps = 92/660 (13%)

Query: 45  LVEEANMLFDQVKREGL---CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           ++ EA  +++++  +G+   C     + + ++ A  +   ++  E   +E ++ G   D 
Sbjct: 204 MIREARDVYNKMASKGVKGDCA----TISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIER 160
              + +++  C       AL +  E+ D GWV  E +F+ ++    K G++ +A ++   
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M  C   +N      L+ G+ K+  +D AL+LFDKM ++G   +   Y VII   CKN  
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           ++ A ++Y++MK                                 ++D++      NS++
Sbjct: 380 MDKAYEIYNQMK---------------------------------NKDISPTVFNVNSLI 406

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R  +   S ++A  L       E +A  G+            N  +++ +++ L K+GK+
Sbjct: 407 RGYLKARSPEEASKLFD-----EAVA-CGIA-----------NVFTYNSLLSWLCKEGKM 449

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A S++ +M + G   +V  YNN+I G C    ++ +  +  EM E G KP   T + +
Sbjct: 450 SEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                ++ D   A  L  +MR +   P      ++I  LCK G+  E+   L  +VQEGF
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P  + Y+  I G +    V+ AL ++ ++C  G  P+V  Y  +I+G CK+  +  A  
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK----------------- 563
           + +EM  KG+   V  Y  LI+G+C+ G++  A   LS + E                  
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 564 ----------------ESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
                             G P D+  YTTLI GL   G+   A  L+ EM  KG  P+ I
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  LI GLC   +   A      M  K M P +F++  LI+    E N   AF +  EM
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 169/624 (27%), Positives = 296/624 (47%), Gaps = 31/624 (4%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +A   VK  C      +  +IR     G +EEA   F + K +G+ + +  +Y+ ++EA+
Sbjct: 215 MASKGVKGDC----ATISVMIRASMREGKLEEAEGWFREAKNKGVEL-DARAYSIVIEAV 269

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           CK          L+EM+D GW   +   T ++ V    G+  +A+ V  E++  G  ++ 
Sbjct: 270 CKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNV 329

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
            V + L+  + K G++D A EL ++M++  I  N  T+ V+I    K   +DKA +++++
Sbjct: 330 VVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQ 389

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M     +      + +I G  K +  E A +L+ E    GI   F   S L   C  EG+
Sbjct: 390 MKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCK-EGK 448

Query: 256 LTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVE 311
           ++     IWE    + V    +  N+++      G +D A  +   M+ KG     +   
Sbjct: 449 MSEAC-SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYS 507

Query: 312 MLM--IFKG----------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +LM   FK                  ++P+  + +IIIN L K G+   +    +++ Q 
Sbjct: 508 VLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQE 567

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G +     YN +IDG      +  +  +  EM + G  P  FT  ++    C+  ++  A
Sbjct: 568 GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L ++ +M+ +G E  V     LI   C+ G  + A + L+++ + G  P+ V YS+ I G
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              ++ ++ AL L + +   G   D+  Y  +ISGL K  ++  A +L+ EM+ KG++P 
Sbjct: 688 FRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TY++LI+G C  G ++ A   L  M +++  +P V  Y TLI G    G   +A  L 
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDM-DRKCMTPTVFIYNTLITGHFKEGNLQEAFRLH 806

Query: 594 NEMEEKGCAPNRITFMALITGLCK 617
           NEM +KG  P+  T+  L+ G  K
Sbjct: 807 NEMLDKGLVPDDTTYDILVNGKVK 830



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/569 (26%), Positives = 263/569 (46%), Gaps = 19/569 (3%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELI 158
           D      LL  Y  + + + A+  FN +I+   V    V +I L    K   + +A ++ 
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            +M    ++ +  T  V+I   +++ ++++A   F +    G   DA  Y ++I  +CK 
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
                AL L  EM+  G  P   I +++I  C  +G++   VK       V    L C  
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVK-------VKGEMLSCGK 325

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKD 337
            M ++V       A  L++   K   + D  +E+   + +  + PN  ++ +II    K+
Sbjct: 326 PMNVVV-------ATTLMKGYCKQGDL-DSALELFDKMNENGICPNNVTYAVIIEWCCKN 377

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +D A  ++ +M        VF  N+LI G   +   EE+ +L  E    G     FT 
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANV-FTY 436

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+   LC+   +  A ++  KM  +G  P V     +I   C+ G    A     +M++
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  P+++ YS  + G       + A  L+  +      P     NIII+GLCKA R +E
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           ++D   +++ +G IP+  TYN +I+G+ K G+++ A+   + M  K   SP+V TYT LI
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC-KIGVSPNVFTYTNLI 615

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +G C +   D A+ + +EM+ KG   +   + ALI G C+      A      ++E G+ 
Sbjct: 616 NGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLS 675

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+  V+ ++IS F    N   A  + K M
Sbjct: 676 PNKVVYSSMISGFRKLQNMEAALHLHKRM 704



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 248/511 (48%), Gaps = 23/511 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++ A  LFD++   G+C PNN +Y  ++E  CK+ ++D       +M++       + 
Sbjct: 343 GDLDSALELFDKMNENGIC-PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFN 401

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           +  L++ Y  +   ++A  +F+E +  G  +   ++ LL    K G++ +AC + E+M  
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +R +  ++  +I G  ++  +D A  +F +M + G   +   Y V++ G  K    E 
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEY 521

Query: 224 ALQLYSEMKGSGITP-DFE---ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           A  LY  M+G  I P DF    I++ L  +         L K + E      MT  C  I
Sbjct: 522 AFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC--I 579

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +   V  GS++ A  +   M K      +GV          SPN  ++  +IN   K   
Sbjct: 580 IDGFVKEGSVNSALAVYTEMCK------IGV----------SPNVFTYTNLINGFCKSNN 623

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +DLAL +  EM   G   +V +Y  LIDG C    +  + +LL E++E G  P     +S
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSS 683

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           M     + Q++  AL+L ++M  +G    ++  T LI  L K GK + A     +M+ +G
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +PD++ YS  I GL +  +++ A ++  D+      P V  YN +I+G  K   + EA 
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            L NEM+ KGL+P   TY++L+NG  K GN+
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 217/452 (48%), Gaps = 17/452 (3%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  T  VL++ FVK  R ++A +L  +  +     +  MY  +I G CK  Q++ A +L 
Sbjct: 75  NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLV---KEIWEDRDVNTMTLLCNSIMRILVS 285
            EMK  G+  D  + S LI     +G +   +   K + E+   N +T   N+++  L  
Sbjct: 135 DEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITY--NTVVNGLCK 192

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              ID+A  L   M K    A  G E          P+  S+  +I+ L K  ++D A  
Sbjct: 193 ANRIDEALELFDDMEKRYE-ASHGCE----------PDVISYSTVIDALCKAQRVDKAYE 241

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
            F+ M  +GC  NV  Y++LIDGLC  +R  E  ELL  M+E GF       N+M   L 
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +  +   A     ++   G +P V    + +  LCK G+  EA+R L +MV+    PD++
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS+ I G     R+D A ++F  +  H C P  V +  ++ G  + ++  EA  +  +M
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 421

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  G IP + TYN+L++  C + +++ A+    +M  K+   PD  TY  LI  LC A R
Sbjct: 422 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARR 480

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            D+A    + ME     PN     AL+  LCK
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 278/608 (45%), Gaps = 52/608 (8%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH-GWVDEHVFSILLVAFSKWGEVDKA 154
           G+ ++ YT   LL  +  + + ++A  +  E ++   + +E +++ ++  F K G+VD+A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL++ M +  ++++      LI G  +K R+D+AL+ F  M +   + +   Y+ ++ G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNG 189

Query: 215 LCKNKQLEMALQLYSEMK-----GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           LCK  +++ AL+L+ +M+       G  PD    S +I +         L K    D+  
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDA---------LCKAQRVDKAY 240

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                     MR +    ++    +L+  + K +  ++    +L + +     N   F+ 
Sbjct: 241 EYFKR-----MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNA 295

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ L K+ + + A   F  + + G   NV  YN  + GLC + R++E+Y +L EM ES 
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T +S+    C+   +  A ++  +M V    P       L+    +H K+ EAF
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R   DMV  GF+P +  Y+  +  +     V+ ALE++  +      PD   Y  +I  L
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL------------ 557
           C+A+RV EA++  + M    ++P+ A  + L+   CK G +D+A   L            
Sbjct: 476 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG 535

Query: 558 -------------------SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
                              S++L       D  TY+  +  +C AG+PD+A+ +  +M  
Sbjct: 536 ETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVL 595

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG  P+  T++A++  LC  DR  +A+  F  M  +G  P +  +  LI    S      
Sbjct: 596 KGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADE 655

Query: 659 AFEVLKEM 666
           AF + + M
Sbjct: 656 AFRIFEAM 663



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 257/604 (42%), Gaps = 38/604 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA+ L  + + E LC PN   Y  ++   CK+  VD     L EM++ G   D    + 
Sbjct: 93  EEAHRLLKE-ELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHST 151

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+Q  C  G+ D+AL  F  + +    +   ++ ++    K   +D+A EL    DD   
Sbjct: 152 LIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELF---DDMEK 208

Query: 167 RLNEKTFC--------VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           R      C         +I    K  RVDKA + F +M   G A +   Y  +I GLCK 
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 268

Query: 219 KQLEMALQLYSEMKGSGI---TPDFE-ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            +    L+L   MK  G      DF  +L  L  +   E       + +   +  N +T 
Sbjct: 269 DRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N  +  L   G +D+AY +L  M++ +                V+P+  ++  II+  
Sbjct: 329 --NVAVHGLCKAGRVDEAYRILLEMVESK----------------VTPDVITYSSIIDGF 370

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A  +F  M    C+ +   +  L+ G     +  E++ +  +M  +GF P  
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +  C+C    V  AL +  KM+ +  +P       LI+ LC+  +  EA  FL  
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M  +  +P+     A +  L     VD A  +  ++   GC P    + I++  L   ++
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
              A  L     + G +   ATY+L +   CK+G  D+A+  + +M+ K    PD  TY 
Sbjct: 551 WEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK-GVRPDEGTYV 606

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            ++  LC   R + AI  + +M  +GCAP  +T+  LI   C  D    A   F  M   
Sbjct: 607 AVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAA 666

Query: 635 GMKP 638
           G  P
Sbjct: 667 GFTP 670



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 226/533 (42%), Gaps = 34/533 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV-----EMRLK 90
           LI+ L   G ++EA   F  +  E  C PN  +YN ++  LCK+  +D       +M  +
Sbjct: 152 LIQGLCRKGRIDEALEQFKSMGEE--CSPNVITYNTVVNGLCKANRIDEALELFDDMEKR 209

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
               +G   D  + + ++   C + + DKA   F  +   G     V +S L+    K  
Sbjct: 210 YEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVD 269

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
              +  EL+  M +    +N   F  ++H   K    +KA Q F+++ KSG   +   Y+
Sbjct: 270 RPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 329

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--------TLLVK 261
           V + GLCK  +++ A ++  EM  S +TPD    S +I      G +         ++V 
Sbjct: 330 VAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH 389

Query: 262 EIWEDRDVNTMTLL--------CNSIMRI---LVSNGSID--QAYNLLQAMIKGEPIADV 308
           E      V  MTLL             R+   +V+ G I   Q YN+L   + G    + 
Sbjct: 390 ECIP-HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448

Query: 309 GVEMLMIFK-GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
            +E+    K     P+ +++  +I  L +  ++D A      M     + N  + + L++
Sbjct: 449 ALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 508

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            LC    ++E+  +L  + E G +P   T   +   L  R+    A  L+R     G   
Sbjct: 509 VLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVA 565

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                +L + E+CK GK  EA   +  MV +G  PD   Y A +  L  + RV+ A+  F
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             + + GC P +V Y ++I   C A    EA  +F  M+  G  P   T   L
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 126/235 (53%), Gaps = 9/235 (3%)

Query: 424 GHEPWVKHNT----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           G++P  +HN     +L+    K  +  EA R L + ++    P+ + Y+  I G     +
Sbjct: 67  GNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQ 126

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           VD A EL  ++   G   DV+ ++ +I GLC+  R+ EA + F  M  +   P+V TYN 
Sbjct: 127 VDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNT 185

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGS----PDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           ++NG CK+  ID+A+     M ++   S    PDVI+Y+T+ID LC A R D A   +  
Sbjct: 186 VVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 245

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           M   GCAPN +T+ +LI GLCK DRP   L     MKEKG   ++  F A++ A 
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 211/511 (41%), Gaps = 35/511 (6%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKRE----GLCVPNNYSYNCLLEALCKSCSV 82
           SP  + +  ++  L     ++EA  LFD +++       C P+  SY+ +++ALCK+  V
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 236

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
           D      K M+  G   +  T + L+   C   +  + L +   + + G+ ++   F+ +
Sbjct: 237 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAM 296

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L A  K  E +KAC+  ER+     + N  T+ V +HG  K  RVD+A ++  +M +S  
Sbjct: 297 LHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   Y  II G CK  +++ A  +++ M      P       L+   S+  +     +
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416

Query: 262 EIWEDRDVNTMTL----LCNSIMRILVSNGSIDQAYNLLQAMIKGE---------PI--- 305
            + ED  VN   +      N +M  +    S++ A  +   M + +         P+   
Sbjct: 417 -VHEDM-VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQC 474

Query: 306 ------ADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                  D   E L + +   V PN +    ++  L K G++D A S+   + ++GC   
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPL 534

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +  L++ L    + E + +LLR     GF     T +     +C+      A+ ++ 
Sbjct: 535 GETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIE 591

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M ++G  P       +++ LC   +   A      M   G  P +V Y+  IG      
Sbjct: 592 QMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             D A  +F  + A G  P       + S L
Sbjct: 652 MADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 34/260 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+ C+     VE A  ++ ++KR+    P+  +Y  L++ LC++  VD  +  L  M+  
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEAD 494

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG--------------------W--- 132
               +      L++V C  G+ D+A SV + +++ G                    W   
Sbjct: 495 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAA 554

Query: 133 ----------VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                      D   +S+ +    K G+ D+A E+IE+M    +R +E T+  ++     
Sbjct: 555 SKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCG 614

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV+ A+  F+KM   G A     Y ++IG  C     + A +++  M  +G TP  + 
Sbjct: 615 LDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQT 674

Query: 243 LSKLITSCSDEGELTLLVKE 262
           +  L +   D G   LLV++
Sbjct: 675 MRTLSSCLRDAGYQDLLVRQ 694


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 269/599 (44%), Gaps = 53/599 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
            F ++K +GL  P++ SY  ++  LCK+  +   E    +M+        Y    ++  Y
Sbjct: 5   FFHELKAQGL-KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
            ++G+F+ A  +   + + G +   V F+ +L    K  +VD+A  L E M   +   N 
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 122

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ ++I       RV++A ++ D+M  +    +    ++++  LCK ++LE A +++  
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
               G  PD       +T CS                           ++  L   G +D
Sbjct: 183 ASQRGCNPD------CVTYCS---------------------------LIDGLGKKGQVD 209

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY L + M+      D G           + N   +  +I      G+ +    +F+E+
Sbjct: 210 EAYRLFEKML------DAGH----------NANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + GC  ++ L N  +D +  +  +E+   +  ++   GF P   + + +   L +    
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
               N+   M+ QG     +    ++   CK GK  +A+  L +M ++   P +  Y A 
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 373

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL  I R+D A  LF +  + G   +VV Y+ +I G  K  R+ EA  +  EM+ KGL
Sbjct: 374 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 433

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V T+N L++   K+  I++A++C   M E +   P+  TY+ LI+GLC   + + A 
Sbjct: 434 TPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC-PPNTYTYSILINGLCRVQKYNKAF 492

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + W +M+++G  PN +T+  +I+GL K      A   F   K  G  PD   F ALI  
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 225/483 (46%), Gaps = 23/483 (4%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A + F ++   G   D   Y  +I  LCK  +L  A +L+++M+     P     + +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 249 SCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                G      K  E   +R      +  NSI+  L     +D+A +L + M       
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM------- 114

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                     K    PN+S+++III+ L   G+++ A  +  EM       N+   N ++
Sbjct: 115 ----------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 164

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           D LC + +LEE+Y++     + G  P   T  S+   L ++  V  A  L  KM   GH 
Sbjct: 165 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 224

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                 T LI+    HG+  +  +   ++++ G  PD+   +  +  +     V+    +
Sbjct: 225 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 284

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F DI ++G  PDV +Y+I+I GL KA +  E  ++F+ M  +G       YN +++G+CK
Sbjct: 285 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 344

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           SG + +A   L  M EK    P V TY  ++DGL    R D+A ML+ E + KG   N +
Sbjct: 345 SGKVHKAYEILEEMKEK-CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS--ELNPPLA-FEVL 663
            + +LI G  K  R   A +    M +KG+ P+++ + +L+ A +   E+N  L  F+ +
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463

Query: 664 KEM 666
           KEM
Sbjct: 464 KEM 466



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 228/496 (45%), Gaps = 21/496 (4%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  S  +   ++ CLG    V+EA  LF+ +K++    PN+ +YN +++ LC    V+  
Sbjct: 84  CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEA 141

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L EM+      +  T+  ++   C + + ++A  +F      G   + V +  L+  
Sbjct: 142 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 201

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G+VD+A  L E+M D     N   +  LI  F    R +   ++F ++ + G   D
Sbjct: 202 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 261

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
             + +  +  + K  ++E    ++ +++  G  PD    S LI   +  G+   T  +  
Sbjct: 262 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 321

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             + +         N+++     +G + +AY +L+ M                 +  V P
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK----------------EKCVQP 365

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
             +++  I++ L K  +LD A  LF E    G   NV LY++LIDG     R++E+Y +L
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM + G  P  +T NS+   L + +++  AL   + M+     P     ++LI  LC+ 
Sbjct: 426 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 485

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  +AF F  DM ++G +P++V Y+  I GL  +  +  A  LF    A+G  PD  ++
Sbjct: 486 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 545

Query: 503 NIIISGLCKAQRVAEA 518
           N +I G+  A R  EA
Sbjct: 546 NALIEGMSNANRAMEA 561



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 194/408 (47%), Gaps = 20/408 (4%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  +F+   + G C P+  +Y  L++ L K   VD      ++M D G   +    T
Sbjct: 173 LEEAYKIFESASQRG-CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 231

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L++ +   G+ +    +F E+I  G   D  + +  +    K GEV+K   + E +   
Sbjct: 232 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 291

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               + +++ +LIHG  K  +  +   +F  M + GFA DA  Y+ ++ G CK+ ++  A
Sbjct: 292 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 351

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            ++  EMK   + P       ++   +  D  +   ++ E  + + +    +L +S++  
Sbjct: 352 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G ID+AY +L+ M+K               KG ++PN  +++ +++ L+K  +++ 
Sbjct: 412 FGKVGRIDEAYLILEEMMK---------------KG-LTPNVYTWNSLLDALVKAEEINE 455

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL  F+ M ++ C  N + Y+ LI+GLC   +  +++   ++M++ G  P   T  +M  
Sbjct: 456 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 515

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            L +  ++  A +L  + +  G  P       LI+ +    +AMEA++
Sbjct: 516 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 154/360 (42%), Gaps = 37/360 (10%)

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL-------------------------- 375
           +A   F E+   G   +   Y ++I  LC + RL                          
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 376 ---------EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
                    E++Y+LL  + E G  P+  + NS+  CL +++ V  AL+L   M+ +  E
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAE 119

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P      ++I  LC  G+  EA+R L +M      P+++  +  +  L   ++++ A ++
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F      GC PD V Y  +I GL K  +V EA  LF +M+  G   +   Y  LI  +  
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G  +        ++ +    PD+    T +D +  AG  +   M++ ++   G  P+  
Sbjct: 240 HGRKEDGHKIFKELI-RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 298

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++  LI GL K  + R     F  MK++G   D   + A++  F        A+E+L+EM
Sbjct: 299 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 7/235 (2%)

Query: 44  GLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           G V +A  + +++K +  CV P   +Y  +++ L K   +D   M  +E +  G   +  
Sbjct: 346 GKVHKAYEILEEMKEK--CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
             + L+  +   G+ D+A  +  E++  G   + + ++ LL A  K  E+++A    + M
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +     N  T+ +LI+G  +  + +KA   +  M K G   +   Y  +I GL K   +
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 523

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
             A  L+   K +G  PD    + LI   S+        +  W D    TM L C
Sbjct: 524 TDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWLD---TTMRLDC 575


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 166/648 (25%), Positives = 287/648 (44%), Gaps = 63/648 (9%)

Query: 25  RCFMSPGALGFL----IRCLGSVGLVEEANMLFDQVKREGL--CVPNNYSYNCLLEALCK 78
           R  +SP  +  L    IR     G + +A    D  +R  L  C P   +YN +++AL  
Sbjct: 44  RSRLSPATIHPLYVASIRAYARAGRLRDA---VDAFERMDLFACPPAAPAYNAIMDALVD 100

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
           +   D        M   G   D +T T  L+ +C + +   AL +   +   G V    +
Sbjct: 101 AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AY 157

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
             ++      G    A +L ++M   ++  N   F  ++H   K+  V +A  L  K+ +
Sbjct: 158 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 217

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G + +   Y++ I GLC+  +L  A++L   M+   + PD                   
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD------------------- 257

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                          +  N+++R L       +A + L+ M+                +G
Sbjct: 258 --------------VVTYNTLIRGLCKKSMPQEAMHYLRRMMN---------------QG 288

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P+  +++ II+   K   +  A  L ++    G + +   Y +LI+GLC    +E +
Sbjct: 289 CL-PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL  E +  G KP     NS+ + LC +  ++ AL ++ +M  +G  P ++   ++I  
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK G   +A   + D + +G+LPD+  ++  I G     ++D AL+L   +  +G  PD
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + YN +++GLCKA +V E  + F EMI KG  P+  TYN+LI  +C+S  +++A   + 
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M  +E   PD +++ TLI G C  G  + A +L+ ++EEKG +    TF  LI      
Sbjct: 528 KM-SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                A   F  M  KG + D + +  LI       N   A+  L EM
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM 634



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 257/581 (44%), Gaps = 53/581 (9%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R     GA+ +  ++  L + G   +A  LFDQ+    +  PN  ++N +L ALCK   V
Sbjct: 147 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV-FPNLAAFNKVLHALCKRGDV 205

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILL 142
               + L ++   G   + +T    ++  C +G+  +A+ + + +  +   D   ++ L+
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 265

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               K     +A   + RM +     ++ T+  +I G+ K S V +A +L       GF 
Sbjct: 266 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 325

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            D   Y  +I GLC    +E AL+L++E +  GI PD                       
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI---------------------- 363

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                      ++ NS+++ L   G I  A  ++  M      A+ G            P
Sbjct: 364 -----------VVYNSLVKGLCLQGLILHALQVMNEM------AEEGCH----------P 396

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++I+IN L K G +  A  +  +    G + +VF +N LIDG C   +L+ + +L+
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M E G  P   T NS+   LC+   V       ++M ++G  P      +LI+  C+ 
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  EA + +  M QEG  PD V ++  I G      ++ A  LF+ +   G       +
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 576

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I        +  AE +F+EM++KG      TY +LI+G CK+ N+D+A + L  M+ 
Sbjct: 577 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI- 635

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           K+   P + T+  +I+ L +  R   A+ + + M + G  P
Sbjct: 636 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 105/244 (43%), Gaps = 8/244 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A ++  +    Q+++   C  +P     LI        +EEA+ +  ++ +EGL  P
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH-P 536

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  S+N L+   C++  ++   +  +++++ G+     T   L+  +        A  +F
Sbjct: 537 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 596

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E++  G   D + + +L+    K   VD+A   +  M       +  TF  +I+     
Sbjct: 597 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 656

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFE 241
            RV +A+ +   M K G   +    D I+      K++     L  ++  KG    P +E
Sbjct: 657 HRVFQAVGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKGHISYPTYE 712

Query: 242 ILSK 245
           +L +
Sbjct: 713 VLHE 716


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 161/542 (29%), Positives = 257/542 (47%), Gaps = 24/542 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    ++ L   + ++   DLV    K+M+  G  ++ YTL+ ++   C   +   A S 
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +II  G+  + V FS L+      G V +A EL++RM +   +    T   L++G   
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V  A+ L D+M ++GF  +   Y  ++  +CK+ Q  +A++L  +M+   I  D   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 243 LSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S +I     +G L     L  E+ E +      ++  +++R     G  D    LL+ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK +                ++P+  +F  +I+  +K+GKL  A  L +EM Q G   + 
Sbjct: 309 IKRK----------------ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y +LIDG C  N+L+++  +L  M   G  P   T N +    C+   +   L L RK
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412

Query: 420 MRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M ++G     V +NT LI+  C+ GK   A     +MV     PDIV Y   + GL D  
Sbjct: 413 MSLRGVVADTVTYNT-LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
             + ALE+F  I       D+  YNIII G+C A +V +A DLF  +  KG+ P V TYN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I G CK G++ +A L L R +E++  SP+  TY  LI      G    +  L  E++ 
Sbjct: 532 IMIGGLCKKGSLSEADL-LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590

Query: 599 KG 600
            G
Sbjct: 591 CG 592



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 178/411 (43%), Gaps = 50/411 (12%)

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D A +L Q M +  P                 P    F  + + + +  + DL L L ++
Sbjct: 54  DDAVDLFQEMTRSRP----------------RPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   N++  + +I+  C   +L  ++  + ++ + G++P   T +++   LC    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  AL LV +M   GH+P +     L+  LC +GK  +A   +  MV+ GF P+ V Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  +    +  LA+EL R +       D V Y+III GLCK   +  A +LFNEM  KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------------------- 564
               +  Y  LI G+C +G  D     L  M++++                         
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 565 ---------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
                      SPD +TYT+LIDG C   + D A  + + M  KGC PN  TF  LI G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK +     L  FR M  +G+  D   +  LI  F       +A E+ +EM
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 215/483 (44%), Gaps = 21/483 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +++ L+  LC    V      +  M + G      TL  L+   C +G+   A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + +++ G+  +E  +  +L    K G+   A EL+ +M++  I+L+   + ++I G  K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              +D A  LF++M   GF +D  +Y  +I G C   + +   +L  +M    ITPD   
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319

Query: 243 LSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI     EG+L     L KE+ + R ++  T+   S++        +D+A ++L   
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLD-- 376

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        LM+ KG   PN  +F+I+IN   K   +D  L LFR+M+  G + + 
Sbjct: 377 -------------LMVSKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI G C   +LE + EL +EM     +P   +   +   LC   +   AL +  K
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +     E  +    ++I  +C   K  +A+     +  +G  PD+  Y+  IGGL     
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A  LFR +   G  P+   YNI+I          ++  L  E+   G     +T  +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 540 LIN 542
           +++
Sbjct: 603 VVD 605



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 1/317 (0%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A+ LF+EMT+      +  ++ L   +  + + +   +L ++ME  G     +T
Sbjct: 50  DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           L+ M  C CR + +  A + + K+   G+EP     + LI  LC  G+  EA   +  MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P ++  +A + GL    +V  A+ L   +   G  P+ V Y  ++  +CK+ + A
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +L  +M  + +      Y+++I+G CK G++D A    + M E +    D+I YTTL
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTL 288

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I G C AGR DD   L  +M ++   P+ + F ALI    K  + R A    + M ++G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 637 KPDMFVFVALISAFLSE 653
            PD   + +LI  F  E
Sbjct: 349 SPDTVTYTSLIDGFCKE 365



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 198/426 (46%), Gaps = 26/426 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A +L D++   G   PN  +Y  +L+ +CKS    L    L++M++     D   
Sbjct: 191 GKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + ++   C  G  D A ++FNE+   G+  D  +++ L+  F   G  D   +L+  M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I  +   F  LI  FVK+ ++ +A +L  +M + G + D   Y  +I G CK  QL+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
            A  +   M   G  P+    + LI   C     D+G L L  K     R V   T+  N
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG-LELFRK--MSLRGVVADTVTYN 426

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++++     G ++ A  L Q M+                   V P+  S+ I+++ L  +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRR----------------VRPDIVSYKILLDGLCDN 470

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+ + AL +F ++ +     ++ +YN +I G+CN+++++++++L   +   G KP   T 
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N M   LC++  +  A  L RKM   GH P      +LI+     G A ++ + + ++ +
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590

Query: 458 EGFLPD 463
            GF  D
Sbjct: 591 CGFSVD 596



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/228 (19%), Positives = 94/228 (41%), Gaps = 37/228 (16%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V   C  +      LI       L+++   LF ++   G+ V +  +YN L++  C+  
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV-VADTVTYNTLIQGFCELG 436

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI------------- 127
            +++ +   +EM       D  +   LL   C++G+ +KAL +F +I             
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496

Query: 128 -----------IDHGW------------VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
                      +D  W             D   ++I++    K G + +A  L  +M++ 
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
               N  T+ +LI   + +    K+ +L +++ + GF+ DA+   +++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 262/550 (47%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+++F E+I    +   V FS    A ++  + +   +  ++++   I  N  T  ++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  +   A  +  K+ K G+  D   ++ +I GL    ++  A+ L   M  +G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD                                  +  NSI+  +  +G    A +LL
Sbjct: 190 QPD---------------------------------VVTYNSIVNGICRSGDTSLALDLL 216

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +    ADV                 ++  II++L +DG +D A+SLF+EM   G  
Sbjct: 217 RKMEERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN+L+ GLC + +  +   LL++M      P   T N +     +   +  A  L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++M  +G  P +     L+   C   +  EA   L  MV+    PDIV +++ I G   
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +KRVD  +++FR+I   G   + V Y+I++ G C++ ++  AE+LF EM++ G++P V T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y +L++G C +G +++A+      L+K      ++ YTT+I+G+C  G+ +DA  L+  +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  PN +T+  +I+GLCK      A +  R M+E G  P+   +  LI A L + + 
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 657 PLAFEVLKEM 666
             + ++++EM
Sbjct: 560 TASAKLIEEM 569



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 260/557 (46%), Gaps = 56/557 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF ++ R    +P+   ++    A+ ++   +LV    K+++  G  ++ YTL  
Sbjct: 70  DDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  +C   +   A SV  +++  G+                 E D              
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-----------------EPDTT------------ 159

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI G   + +V +A+ L D+M ++G   D   Y+ I+ G+C++    +AL 
Sbjct: 160 -----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRIL 283
           L  +M+   +  D    S +I S   +G +     L KE+ E + + +  +  NS++R L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL 273

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  +    LL+ M+  E                + PN  +F+++++  +K+GKL  A
Sbjct: 274 CKAGKWNDGALLLKDMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEA 317

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L++EM   G   N+  YN L+DG C  NRL E+  +L  M  +   P   T  S+ + 
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C  + V   + + R +  +G        ++L++  C+ GK   A     +MV  G LPD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ Y   + GL D  +++ ALE+F D+        +V Y  II G+CK  +V +A +LF 
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  KG+ P+V TY ++I+G CK G++ +A + L +M E++  +P+  TY TLI      
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTLIRAHLRD 556

Query: 584 GRPDDAIMLWNEMEEKG 600
           G    +  L  EM+  G
Sbjct: 557 GDLTASAKLIEEMKSCG 573



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 34/364 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A++LF+EM +   + ++  ++     +  + +     +  +++E +G     +T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           LN M  C CR      A +++ K+   G+EP       LIK L   GK  EA   +  MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  PD+V Y++ + G+       LAL+L R +       DV  Y+ II  LC+   + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------ 564
            A  LF EM TKG+  SV TYN L+ G CK+G  +   L L  M+ +E            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 565 ----------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                   SP++ITY TL+DG C+  R  +A  + + M    C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +TF +LI G C   R    +  FR + ++G+  +   +  L+  F       LA E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 663 LKEM 666
            +EM
Sbjct: 426 FQEM 429



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/546 (21%), Positives = 243/546 (44%), Gaps = 29/546 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD---QVKREGLCVPNNYSYNCLL 73
           L Q++++SR    P  + F  R   ++   ++ N++ D   Q++  G+   N Y+ N ++
Sbjct: 75  LFQEMIRSRPL--PSLVDF-SRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMI 130

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-W 132
              C+ C        L ++   G+  D  T   L++     G+  +A+ + + ++++G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            D   ++ ++    + G+   A +L+ +M++ N++ +  T+  +I    +   +D A+ L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F +M   G  S    Y+ ++ GLCK  +      L  +M    I P+    + L+     
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 253 EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           EG+L     E++++   R ++   +  N++M        + +A N+L  M++ +      
Sbjct: 311 EGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK------ 363

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                      SP+  +F  +I       ++D  + +FR +++ G + N   Y+ L+ G 
Sbjct: 364 ----------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C S +++ + EL +EM   G  P   T   +   LC    +  AL +   ++    +  +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              T +I+ +CK GK  +A+     +  +G  P+++ Y+  I GL     +  A  L R 
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P+   YN +I    +   +  +  L  EM + G     ++  ++I+    SG 
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGE 592

Query: 550 IDQAML 555
           +D++ L
Sbjct: 593 LDKSFL 598



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           VC+   +  G++DIK+ D A+ LF+++      P +V ++   S + + ++     D   
Sbjct: 54  VCFRERLRSGIVDIKKDD-AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           ++   G+  ++ T N++IN +C+      A   L +++ K    PD  T+ TLI GL + 
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLE 171

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+  +A++L + M E GC P+ +T+ +++ G+C+      AL   R M+E+ +K D+F +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +   +     A  + KEM
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEM 254


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 244/534 (45%), Gaps = 23/534 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S LL+  S+ G      +   RM    ++ N   +  +I+   K   V  A  +  K+
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +S  + D   Y  +I G C+   L+ ALQ++++M   G  P+    S LI    D G +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 257 TL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                L++E+     + T    C   +  L   G  + A+ L   M       + G E  
Sbjct: 302 NEAFDLIREMILHGILPTAHT-CTGPIIALCDMGCYEDAWRLFVDM------KNKGCE-- 352

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   PN  ++  +I+ L   G L +A+ LF  M++ G   N   YN LI+ L  + 
Sbjct: 353 --------PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHN 432
           R++ ++ +L  M  +G  P   T N M +  C   D   A+ ++  M  +GH    V +N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T+ IK  C  G    A R L  M   G  PD   Y+  I G   I +++ A  LF ++  
Sbjct: 465 TI-IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G CP+ V Y  +I G CK +++  A  L   M   G  P+V TYN+LI+G  K  N   
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A      M+E E   P+V+TYT +IDGLC  G    A+ ++N+M E+GC PN +T+ +LI
Sbjct: 584 AEELCKVMIE-EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L +  +   A   F  ++  G+ PD   +V +I A++       AF  L  M
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 249/523 (47%), Gaps = 27/523 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +++ ++ A  K G V  A  +++++ +  +  +  T+  +I G  +K  +D ALQ+F++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K G   +   Y  +I GLC + ++  A  L  EM   GI P     +  I +  D G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 255 ----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                L + +K    + +V T T L +     L  +G +  A  L   M           
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISG----LCVSGLLKVAIGLFHRM----------- 381

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +  V PNT +++ +IN L+++ ++  A  +   M + GC  N+  YN +I G C
Sbjct: 382 -----SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
                +++  ++  M + G      T N++ +  C   +   AL ++  MR  G +P   
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   CK  K   AF    +MV +G  P+ V Y+A I G    +++D A  L   +
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+V  YN++I GL K    + AE+L   MI +G+ P+V TY  +I+G CK+G+ 
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+   ++M+E +   P+++TY++LI  L   G+ ++A  L+ E+E  G  P+ IT++ 
Sbjct: 617 SLALEMFNKMIE-QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I       +   A      M + G +P ++ +  LI    +E
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 297/684 (43%), Gaps = 45/684 (6%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           AR ++ L +L+Q  ++   F    A   L+  L  +G+       + ++  EG+  PN  
Sbjct: 162 ARTMSFLDMLSQSGLRMGLF----AYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLL 216

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            YN ++ ALCK  +V   E  +K++ +     D +T T ++  +C     D AL VFN++
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G     V +S L+      G V++A +LI  M    I     T    I         
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A +LF  M   G   +   Y  +I GLC +  L++A+ L+  M   G+ P+    + L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I          +LV    E+R +    ++ N + R   S   +     +    I G+P  
Sbjct: 397 I---------NILV----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
            + V   M+ +G  S N  +++ II      G    AL +   M   GC  + + Y  LI
Sbjct: 444 AMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G C  +++E ++ L  EM + G  P   T  ++    C+ + +  A +L+  M+  G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V+   +LI  L K      A      M++EG  P++V Y+A I GL       LALE+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   GC P+++ Y+ +I  L +  +V EAE+LF E+   GLIP   TY  +I  +  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC---------IAGRPD---------- 587
           SG ++ A   L RM+ K    P + TY  LI GL          +A  PD          
Sbjct: 683 SGKVEHAFNFLGRMI-KAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 588 ----DAI-MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               DA+ ++  ++ E     +     AL++ L    R   A      M  +G+ PD   
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + +L+ + L   N  LA  V K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 169/678 (24%), Positives = 277/678 (40%), Gaps = 50/678 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G V +A  +  +V  E    P+ ++Y  ++   C+   +D       +M   
Sbjct: 221 VINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T + L+   C+SG+ ++A  +  E+I HG +   H  +  ++A    G  + A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   M +     N  T+  LI G      +  A+ LF +M++ G   +   Y+ +I  
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
           L +N++++ A  + + M  +G +P+    +++I      G+    +LV      R  +  
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD--------------------VGVEM 312
            +  N+I++    +G+   A  +L  M  G    D                     G+  
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+  G + PN  ++  +I+   KD KLD A SL   M + GC  NV  YN LI GL   
Sbjct: 520 EMVDDG-LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N    + EL + M E G  P   T  +M   LC+      AL +  KM  QG  P +   
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + LI+ L + GK  EA     ++ + G +PD + Y   I   I   +V+ A      +  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 493 HGCCPDVVAYNIIISGLCKA-----QRVAEAEDL-----FNEMITKG------------L 530
            GC P +  Y ++I GL        QR+A   D+     F    T              L
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 531 IP--SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            P  SV   N L++    +G   +A   L  M+  +   PD   Y +L+  L      D 
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS-QGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+ ++  M  +GC  +   +  LI  LC+  R + A + F  M  +   PD  V   LI 
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 649 AFLSELNPPLAFEVLKEM 666
             L +    L  E L  M
Sbjct: 878 GLLRDGYKDLCMEFLHIM 895



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 253/572 (44%), Gaps = 53/572 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   GL++ A  LF ++ R+G+  PN  +YN L+  L ++  +    + L  M   
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   +++ YC  G   KA+ V N ++  G     V ++ ++  +   G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M D   + +E ++  LI GF K S+++ A  LF++M   G   +   Y  +I G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED---RD 268
            CK+++L+ A  L   MK SG  P+ +  + LI   + +   +    L K + E+    +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T + +     L  NGS   A  +   MI+               +G + PN  ++ 
Sbjct: 600 VVTYTAMIDG----LCKNGSTSLALEMFNKMIE---------------QGCL-PNLLTYS 639

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L ++GK++ A +LF E+ + G + +   Y  +I+    S ++E ++  L  M ++
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 389 GFKPTHFTLNSMFRCLCRR-----------QDVVGALNL-----------VRKMRVQGHE 426
           G +PT +T   + + L               DVV   +            V   ++   +
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 427 PW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           P   V+    L+  L   G+  EA   L  M+ +G  PD   Y++ +  L+ ++ VDLA+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM 819

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +F+ +   GC   +  Y  +I  LC+  R  EA   F  M+ +   P      +LI+G 
Sbjct: 820 GVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGL 879

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            + G  D  M  L  ++E     P    YT L
Sbjct: 880 LRDGYKDLCMEFL-HIMETRRYMPSFHIYTIL 910



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 247/597 (41%), Gaps = 49/597 (8%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I  L  +G  E+A  LF  +K +G C PN Y+Y  L+  LC S  + +       M   G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              +  T   L+ +   + +   A  V N +  +G     V ++ ++  +   G+  KA 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            ++  M       N  T+  +I G+        AL++ D M   G   D   Y  +I G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK  ++E A  L++EM   G+             C +E   T L+    +D  ++T T L
Sbjct: 506 CKISKMESAFGLFNEMVDDGL-------------CPNEVTYTALIDGYCKDEKLDTATSL 552

Query: 276 CNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEML---MIFKGTVSPNTSSFDIII 331
              + R         Q YN L+  + K    +  G E L   MI +G + PN  ++  +I
Sbjct: 553 LEHMKRSGCRPNV--QTYNVLIHGLTKQNNFS--GAEELCKVMIEEG-IFPNVVTYTAMI 607

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K+G   LAL +F +M + GC+ N+  Y++LI  L    ++EE+  L  E+E  G  
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL-CKHGKAMEAFR 450
           P   T   M         V  A N + +M   G +P +    +LIK L  ++  A +   
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 727

Query: 451 FLTDMVQE---GFLP--------------------DIVCYSAAIGGLIDIKRVDLALELF 487
            L D+V     G+                       +   +A +  L    R   A EL 
Sbjct: 728 ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             + + G CPD  AYN ++  L + + V  A  +F  M T+G    +  Y  LI   C+ 
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
               +A +    ML + + +PD +    LIDGL   G  D  +   + ME +   P+
Sbjct: 848 HRRKEARITFENMLMR-TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 44/530 (8%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           +IL   RRI    V+   + ++ C  SP  + +  +I+    +G  ++A ++ + + + G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGC--SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
               N  +YN +++  C S +       L  M+D G   D+++ T L+  +C   + + A
Sbjct: 456 HSA-NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +FNE++D G   +E  ++ L+  + K  ++D A  L+E M     R N +T+ VLIHG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K++    A +L   M + G   +   Y  +I GLCKN    +AL+++++M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               S LI +   EG   E   L  E+ E   +    +    ++   + +G ++ A+N L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 297 QAMIK----------GEPIADVGVEMLMIFK-----GTVSPN------TSSFDIIINTLL 335
             MIK          G  I  +  E L+  +       V PN      T+  D +     
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K  +LD  LS             V + N L+  L  + R  E+ ELL  M   G  P   
Sbjct: 754 KLAELDPGLS-------------VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             NS+   L R ++V  A+ + + M  QG E  +     LI  LC+  +  EA     +M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +   + PD V  +  I GL+     DL +E    +      P    Y I+
Sbjct: 861 LMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI    +   +  +   L  + +SG +   F  +++   L R       ++   +M  +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P +     +I  LCK G   +A   +  + +    PD   Y++ I G      +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++F  +   GC P+ V Y+ +I+GLC + RV EA DL  EMI  G++P+  T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C  G  + A      M  K    P+V TYT LI GLC++G    AI L++ M   G  P
Sbjct: 330 LCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+ ALI  L +  R + A V   +M   G  P++  +  +I  +    +P  A  V+
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 664 KEM 666
             M
Sbjct: 449 NNM 451


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 279/595 (46%), Gaps = 59/595 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD---YGWGYDKYTLT 105
            + +F+++KR     PN  + N LL AL +S S   +    +  QD    G   +  T  
Sbjct: 157 GHQIFNKMKRLRF-RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFN 215

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  YC+    ++AL + N++ ++G   ++V ++ +L A  K  ++ +  +L+ +M + 
Sbjct: 216 ILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS 275

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  N  T+ +L+HG+ K   + +A ++ + MT  G   D   Y+ ++ GLC   +++ A
Sbjct: 276 GLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEA 335

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           ++L  +M+   + PD    + LI  C             +E R                 
Sbjct: 336 VRLRDKMESFKLVPDVVTYNTLIDGC-------------FEHR----------------- 365

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             GS D A+ L++ M K   + + GV               + +I+I     +GK+D A 
Sbjct: 366 --GS-DAAFKLVEEM-KARGVKENGV---------------THNIMIKWFCTEGKIDEAS 406

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           ++  +M + G   + F YN +I+G C + ++ E+Y+++ EM   G K   FTLN++   +
Sbjct: 407 NVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466

Query: 405 CRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           C  + +  A  L  K R +G+    V + TL++    K  +A  A +   +M + G +  
Sbjct: 467 CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYF-KDEQADRALKLWEEMKETGIVAT 525

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ Y+  I GL    + D A++   ++   G  PD    NIII G C    V +A    N
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCI 582
           +M+   L P + T N+L+ G C+ G +++ +   +  + K  G P D +TY  +I   C 
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISK--GKPMDTVTYNIIISSFCK 643

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             R +DA  L  EME K   P+R T+ A++TGL K  R   A        EKG +
Sbjct: 644 ERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQ 698



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 160/617 (25%), Positives = 270/617 (43%), Gaps = 67/617 (10%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R + QD VK     +      LI    S    EEA  L +Q+   G C P+N +YN +L 
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYG-CCPDNVTYNTVLT 254

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV- 133
           ALCK   +  V   L +M++ G   ++ T   L+  YC      +A  V   +   G + 
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   ++ ++      G++D+A  L ++M+   +  +  T+  LI G  +    D A +L 
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLV 374

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           ++M   G   +   ++++I   C   +++ A  +  +M  SG +PD    + +I      
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA 434

Query: 254 GELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEPIADVGV 310
           G++    K + E   + +   T   N+++  +     +D AY L ++A  +G  + +V  
Sbjct: 435 GKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV-- 492

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                          ++  +I    KD + D AL L+ EM + G +  +  YN +I GLC
Sbjct: 493 ---------------TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLC 537

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            S + +++ + L E+ E G  P   T N                                
Sbjct: 538 LSGKTDQAVDKLNELLEKGLVPDESTSN-------------------------------- 565

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              ++I   C  G   +AF+F   MV+    PDI   +  + GL     ++  L LF   
Sbjct: 566 ---IIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW 622

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            + G   D V YNIIIS  CK +R+ +A DL  EM  K L P   TYN ++ G  K+G  
Sbjct: 623 ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682

Query: 551 DQAMLCLSRMLEK------ESGSPDVIT----YTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++A     +  EK      +  SP++ T    Y+  I  LC  G+  DA+ L+ + E+KG
Sbjct: 683 EEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKG 742

Query: 601 CAPNRITFMALITGLCK 617
            + N+ T++ L+ GL K
Sbjct: 743 VSLNKYTYIKLMDGLLK 759



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 85/520 (16%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           ++ N  TF +LIHG+   +  ++AL+L ++M + G   D   Y+ ++  LCK  QL    
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVR 266

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  +MK SG+ P+                              NT  +L +        
Sbjct: 267 DLLLQMKNSGLFPN-----------------------------RNTYNILVH-------- 289

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                  Y  L+ + +   + +     LM  KG + P+  +++ ++  L  +GK+D A+ 
Sbjct: 290 ------GYCKLKWLKEAAEVIE-----LMTGKGML-PDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  +M     + +V  YN LIDG       + +++L+ EM+  G K    T N M +  C
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM---------- 455
               +  A N++ KM   G  P       +I   CK GK  EA++ + +M          
Sbjct: 398 TEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTF 457

Query: 456 -------------------------VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                                     + G++ D V Y   I G    ++ D AL+L+ ++
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G    ++ YN II GLC + +  +A D  NE++ KGL+P  +T N++I+G+C  G +
Sbjct: 518 KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           ++A    ++M+E  S  PD+ T   L+ GLC  G  +  + L+N    KG   + +T+  
Sbjct: 578 EKAFQFHNKMVE-HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNI 636

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +I+  CK  R   A      M+ K ++PD + + A+++  
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 193/427 (45%), Gaps = 47/427 (11%)

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           L CN+++  LV + S   +++L+ +    +    +GV+          PN ++F+I+I+ 
Sbjct: 174 LTCNTLLNALVRSNS---SHSLVFSREVFQDAVKLGVQ----------PNVNTFNILIHG 220

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
              D   + AL L  +M + GC  +   YN ++  LC  ++L +  +LL +M+ SG  P 
Sbjct: 221 YCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPN 280

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +    C+ + +  A  ++  M  +G  P V     +++ LC  GK  EA R   
Sbjct: 281 RNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRD 340

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M     +PD+V Y+  I G  + +  D A +L  ++ A G   + V +NI+I   C   
Sbjct: 341 KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEG 400

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA-------------------- 553
           ++ EA ++  +M+  G  P   TYN +ING+CK+G + +A                    
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 554 ----MLCLSRMLE----------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
                +CL + L+          K     D +TY TLI G     + D A+ LW EM+E 
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G     IT+  +I GLC   +   A+     + EKG+ PD      +I  +  E     A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 660 FEVLKEM 666
           F+   +M
Sbjct: 581 FQFHNKM 587


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 244/534 (45%), Gaps = 23/534 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S LL+  S+ G      +   RM    ++ N   +  +I+   K   V  A  +  K+
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +S  + D   Y  +I G C+   L+ ALQ++++M   G  P+    S LI    D G +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 257 TL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                L++E+     + T    C   +  L   G  + A+ L   M       + G E  
Sbjct: 302 NEAFDLIREMILHGILPTAHT-CTGPIIALCDMGCYEDAWRLFVDM------KNKGCE-- 352

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   PN  ++  +I+ L   G L +A+ LF  M++ G   N   YN LI+ L  + 
Sbjct: 353 --------PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHN 432
           R++ ++ +L  M  +G  P   T N M +  C   D   A+ ++  M  +GH    V +N
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T+ IK  C  G    A R L  M   G  PD   Y+  I G   I +++ A  LF ++  
Sbjct: 465 TI-IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G CP+ V Y  +I G CK +++  A  L   M   G  P+V TYN+LI+G  K  N   
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A      M+E E   P+V+TYT +IDGLC  G    A+ ++N+M E+GC PN +T+ +LI
Sbjct: 584 AEELCKVMIE-EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             L +  +   A   F  ++  G+ PD   +V +I A++       AF  L  M
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 249/523 (47%), Gaps = 27/523 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +++ ++ A  K G V  A  +++++ +  +  +  T+  +I G  +K  +D ALQ+F++M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K G   +   Y  +I GLC + ++  A  L  EM   GI P     +  I +  D G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 255 ----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                L + +K    + +V T T L +     L  +G +  A  L   M           
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISG----LCVSGILKVAIGLFHRM----------- 381

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +  V PNT +++ +IN L+++ ++  A  +   M + GC  N+  YN +I G C
Sbjct: 382 -----SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
                +++  ++  M + G      T N++ +  C   +   AL ++  MR  G +P   
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   CK  K   AF    +MV +G  P+ V Y+A I G    +++D A  L   +
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+V  YN++I GL K    + AE+L   MI +G+ P+V TY  +I+G CK+G+ 
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+   ++M+E +   P+++TY++LI  L   G+ ++A  L+ E+E  G  P+ IT++ 
Sbjct: 617 SLALEMFNKMIE-QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I       +   A      M + G +P ++ +  LI    +E
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 297/684 (43%), Gaps = 45/684 (6%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           AR ++ L +L+Q  ++   F    A   L+  L  +G+       + ++  EG+  PN  
Sbjct: 162 ARTMSFLDMLSQSGLRMGLF----AYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLL 216

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            YN ++ ALCK  +V   E  +K++ +     D +T T ++  +C     D AL VFN++
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G     V +S L+      G V++A +LI  M    I     T    I         
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A +LF  M   G   +   Y  +I GLC +  L++A+ L+  M   G+ P+    + L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I          +LV    E+R +    ++ N + R   S   +     +    I G+P  
Sbjct: 397 I---------NILV----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
            + V   M+ +G  S N  +++ II      G    AL +   M   GC  + + Y  LI
Sbjct: 444 AMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G C  +++E ++ L  EM + G  P   T  ++    C+ + +  A +L+  M+  G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V+   +LI  L K      A      M++EG  P++V Y+A I GL       LALE+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   GC P+++ Y+ +I  L +  +V EAE+LF E+   GLIP   TY  +I  +  
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC---------IAGRPD---------- 587
           SG ++ A   L RM+ K    P + TY  LI GL          +A  PD          
Sbjct: 683 SGKVEHAFNFLGRMI-KAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 741

Query: 588 ----DAI-MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               DA+ ++  ++ E     +     AL++ L    R   A      M  +G+ PD   
Sbjct: 742 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 801

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + +L+ + L   N  LA  V K M
Sbjct: 802 YNSLLCSLLRVRNVDLAMGVFKHM 825



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 169/678 (24%), Positives = 277/678 (40%), Gaps = 50/678 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G V +A  +  +V  E    P+ ++Y  ++   C+   +D       +M   
Sbjct: 221 VINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T + L+   C+SG+ ++A  +  E+I HG +   H  +  ++A    G  + A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L   M +     N  T+  LI G      +  A+ LF +M++ G   +   Y+ +I  
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
           L +N++++ A  + + M  +G +P+    +++I      G+    +LV      R  +  
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD--------------------VGVEM 312
            +  N+I++    +G+   A  +L  M  G    D                     G+  
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFN 519

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+  G + PN  ++  +I+   KD KLD A SL   M + GC  NV  YN LI GL   
Sbjct: 520 EMVDDG-LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N    + EL + M E G  P   T  +M   LC+      AL +  KM  QG  P +   
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + LI+ L + GK  EA     ++ + G +PD + Y   I   I   +V+ A      +  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 493 HGCCPDVVAYNIIISGLCKA-----QRVAEAEDL-----FNEMITKG------------L 530
            GC P +  Y ++I GL        QR+A   D+     F    T              L
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758

Query: 531 IP--SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            P  SV   N L++    +G   +A   L  M+  +   PD   Y +L+  L      D 
Sbjct: 759 DPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS-QGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+ ++  M  +GC  +   +  LI  LC+  R + A + F  M  +   PD  V   LI 
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 649 AFLSELNPPLAFEVLKEM 666
             L +    L  E L  M
Sbjct: 878 GLLRDGYKDLCMEFLHIM 895



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 253/572 (44%), Gaps = 53/572 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G+++ A  LF ++ R+G+  PN  +YN L+  L ++  +    + L  M   
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T   +++ YC  G   KA+ V N ++  G     V ++ ++  +   G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M D   + +E ++  LI GF K S+++ A  LF++M   G   +   Y  +I G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED---RD 268
            CK+++L+ A  L   MK SG  P+ +  + LI   + +   +    L K + E+    +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T + +     L  NGS   A  +   MI+               +G + PN  ++ 
Sbjct: 600 VVTYTAMIDG----LCKNGSTSLALEMFNKMIE---------------QGCL-PNLLTYS 639

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I  L ++GK++ A +LF E+ + G + +   Y  +I+    S ++E ++  L  M ++
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699

Query: 389 GFKPTHFTLNSMFRCLCRR-----------QDVVGALNL-----------VRKMRVQGHE 426
           G +PT +T   + + L               DVV   +            V   ++   +
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 427 PW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           P   V+    L+  L   G+  EA   L  M+ +G  PD   Y++ +  L+ ++ VDLA+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM 819

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +F+ +   GC   +  Y  +I  LC+  R  EA   F  M+ +   P      +LI+G 
Sbjct: 820 GVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGL 879

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            + G  D  M  L  ++E     P    YT L
Sbjct: 880 LRDGYKDLCMEFL-HIMETRRYMPSFHIYTIL 910



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 247/597 (41%), Gaps = 49/597 (8%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I  L  +G  E+A  LF  +K +G C PN Y+Y  L+  LC S  + +       M   G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              +  T   L+ +   + +   A  V N +  +G     V ++ ++  +   G+  KA 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            ++  M       N  T+  +I G+        AL++ D M   G   D   Y  +I G 
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK  ++E A  L++EM   G+             C +E   T L+    +D  ++T T L
Sbjct: 506 CKISKMESAFGLFNEMVDDGL-------------CPNEVTYTALIDGYCKDEKLDTATSL 552

Query: 276 CNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEML---MIFKGTVSPNTSSFDIII 331
              + R         Q YN L+  + K    +  G E L   MI +G + PN  ++  +I
Sbjct: 553 LEHMKRSGCRPNV--QTYNVLIHGLTKQNNFS--GAEELCKVMIEEG-IFPNVVTYTAMI 607

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K+G   LAL +F +M + GC+ N+  Y++LI  L    ++EE+  L  E+E  G  
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL-CKHGKAMEAFR 450
           P   T   M         V  A N + +M   G +P +    +LIK L  ++  A +   
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 727

Query: 451 FLTDMVQE---GFLP--------------------DIVCYSAAIGGLIDIKRVDLALELF 487
            L D+V     G+                       +   +A +  L    R   A EL 
Sbjct: 728 ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 787

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             + + G CPD  AYN ++  L + + V  A  +F  M T+G    +  Y  LI   C+ 
Sbjct: 788 GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 847

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
               +A +    ML + + +PD +    LIDGL   G  D  +   + ME +   P+
Sbjct: 848 HRRKEARITFENMLMR-TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 44/530 (8%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           +IL   RRI    V+   + ++ C  SP  + +  +I+    +G  ++A ++ + + + G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGC--SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
               N  +YN +++  C S +       L  M+D G   D+++ T L+  +C   + + A
Sbjct: 456 HSA-NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +FNE++D G   +E  ++ L+  + K  ++D A  L+E M     R N +T+ VLIHG
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K++    A +L   M + G   +   Y  +I GLCKN    +AL+++++M   G  P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               S LI +   EG   E   L  E+ E   +    +    ++   + +G ++ A+N L
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 297 QAMIK----------GEPIADVGVEMLMIFK-----GTVSPN------TSSFDIIINTLL 335
             MIK          G  I  +  E L+  +       V PN      T+  D +     
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K  +LD  LS             V + N L+  L  + R  E+ ELL  M   G  P   
Sbjct: 754 KLAELDPGLS-------------VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQE 800

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             NS+   L R ++V  A+ + + M  QG E  +     LI  LC+  +  EA     +M
Sbjct: 801 AYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +   + PD V  +  I GL+     DL +E    +      P    Y I+
Sbjct: 861 LMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI    +   +  +   L  + +SG +   F  +++   L R       ++   +M  +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P +     +I  LCK G   +A   +  + +    PD   Y++ I G      +D A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++F  +   GC P+ V Y+ +I+GLC + RV EA DL  EMI  G++P+  T    I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C  G  + A      M  K    P+V TYT LI GLC++G    AI L++ M   G  P
Sbjct: 330 LCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+ ALI  L +  R + A V   +M   G  P++  +  +I  +    +P  A  V+
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 664 KEM 666
             M
Sbjct: 449 NNM 451


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 262/550 (47%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+++F E+I    +   V FS    A ++  + +   +  ++++   I  N  T  ++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  +   A  +  K+ K G+  D   ++ +I GL    ++  A+ L   M  +G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD                                  +  NSI+  +  +G    A +LL
Sbjct: 190 QPD---------------------------------VVTYNSIVNGICRSGDTSLALDLL 216

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +    ADV                 ++  II++L +DG +D A+SLF+EM   G  
Sbjct: 217 RKMEERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN+L+ GLC + +  +   LL++M      P   T N +     +   +  A  L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++M  +G  P +     L+   C   +  EA   L  MV+    PDIV +++ I G   
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +KRVD  +++FR+I   G   + V Y+I++ G C++ ++  AE+LF EM++ G++P V T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y +L++G C +G +++A+      L+K      ++ YTT+I+G+C  G+ +DA  L+  +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  PN +T+  +I+GLCK      A +  R M+E G  P+   +  LI A L + + 
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 657 PLAFEVLKEM 666
             + ++++EM
Sbjct: 560 TASAKLIEEM 569



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 260/557 (46%), Gaps = 56/557 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF ++ R    +P+   ++    A+ ++   +LV    K+++  G  ++ YTL  
Sbjct: 70  DDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  +C   +   A SV  +++  G+                 E D              
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-----------------EPDTT------------ 159

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI G   + +V +A+ L D+M ++G   D   Y+ I+ G+C++    +AL 
Sbjct: 160 -----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRIL 283
           L  +M+   +  D    S +I S   +G +     L KE+ E + + +  +  NS++R L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL 273

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  +    LL+ M+  E                + PN  +F+++++  +K+GKL  A
Sbjct: 274 CKAGKWNDGALLLKDMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEA 317

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L++EM   G   N+  YN L+DG C  NRL E+  +L  M  +   P   T  S+ + 
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C  + V   + + R +  +G        ++L++  C+ GK   A     +MV  G LPD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ Y   + GL D  +++ ALE+F D+        +V Y  II G+CK  +V +A +LF 
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  KG+ P+V TY ++I+G CK G++ +A + L +M E++  +P+  TY TLI      
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTLIRAHLRD 556

Query: 584 GRPDDAIMLWNEMEEKG 600
           G    +  L  EM+  G
Sbjct: 557 GDLTASAKLIEEMKSCG 573



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 34/364 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A++LF+EM +   + ++  ++     +  + +     +  +++E +G     +T
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           LN M  C CR      A +++ K+   G+EP       LIK L   GK  EA   +  MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  PD+V Y++ + G+       LAL+L R +       DV  Y+ II  LC+   + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------ 564
            A  LF EM TKG+  SV TYN L+ G CK+G  +   L L  M+ +E            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 565 ----------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                   SP++ITY TL+DG C+  R  +A  + + M    C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +TF +LI G C   R    +  FR + ++G+  +   +  L+  F       LA E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 663 LKEM 666
            +EM
Sbjct: 426 FQEM 429



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/524 (21%), Positives = 239/524 (45%), Gaps = 31/524 (5%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD---QVKREGLCVPNNYSYNCLL 73
           L Q++++SR    P  + F  R   ++   ++ N++ D   Q++  G+   N Y+ N ++
Sbjct: 75  LFQEMIRSRPL--PSLVDF-SRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMI 130

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-W 132
              C+ C        L ++   G+  D  T   L++     G+  +A+ + + ++++G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            D   ++ ++    + G+   A +L+ +M++ N++ +  T+  +I    +   +D A+ L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F +M   G  S    Y+ ++ GLCK  +      L  +M    I P+    + L+     
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 253 EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV- 308
           EG+L     E++++   R ++   +  N++M        + +A N+L  M++ +   D+ 
Sbjct: 311 EGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 309 -----------------GVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                            G+++   I K  +  N  ++ I++    + GK+ LA  LF+EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G + +V  Y  L+DGLC++ +LE++ E+  ++++S          ++   +C+   V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A NL   +  +G +P V   T++I  LCK G   EA   L  M ++G  P+   Y+  
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           I   +    +  + +L  ++ + G   D  +  ++I  L  A +
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           VC+   +  G++DIK+ D A+ LF+++      P +V ++   S + + ++     D   
Sbjct: 54  VCFRERLRSGIVDIKKDD-AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           ++   G+  ++ T N++IN +C+      A   L +++ K    PD  T+ TLI GL + 
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLE 171

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+  +A++L + M E GC P+ +T+ +++ G+C+      AL   R M+E+ +K D+F +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +   +     A  + KEM
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEM 254


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 242/503 (48%), Gaps = 57/503 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  ++ G   + R+  AL++ D+M+  G A    MY VI+   C++     ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G T D                                 T  CN ++  +   G 
Sbjct: 170 EAMHAKGCTLD---------------------------------TGNCNLVLNAICEQGC 196

Query: 289 IDQAYNLLQ---------------AMIKGEPIA----DVGVEMLMIFKGTVSPNTSSFDI 329
           +D+A  LL+               A++KG  +A    DV   M  + +   +PN  +F+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L ++G  +    +  +M++ GC  ++ +Y  +IDG+C    LE + E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW--VKHNTLLIKELCKHGKAME 447
            KP     N++ + LC  +    A  L+ +M  Q   P   V  N +L+   C++G    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTFN-ILVDFFCQNGLVDR 374

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L  M+  G +PD++ Y+  I G      +D A+ L + + + GC P+ V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC A R  +AE+L ++MI +G  P+  T+N LIN  CK G ++QA+  L +ML     S
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML-VNGCS 493

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+T+IDGL  AG+ ++A+ L N M  KG +PN I + ++   L +  R    +  
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  +K+  ++ D  ++ A+IS+ 
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSL 576



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 254/545 (46%), Gaps = 30/545 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  ++R L + G + +A  + D++  +G C P    Y+ +LEA C+S      
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGFRNS 165

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L+ M   G   D      +L   C  G  D+A+ +  ++   G   + V ++ +L  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 145 F---SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
                +WG+V+   EL++ M   +   N  TF  LI    +    ++  ++  +M++ G 
Sbjct: 226 LCMAKRWGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTL 258
             D  MY  II G+CK   LE+A ++ + M   G+ P+   +  + K + S     E   
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L+ E+++ +D     +  N ++     NG +D+   LL+ M+    + DV          
Sbjct: 343 LLSEMFQ-KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV---------- 391

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                  ++  +IN   K+G +D A+ L + M+  GC  N   Y  ++ GLC++ R  ++
Sbjct: 392 ------ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL+ +M + G  P   T N++   LC++  V  A+ L+++M V G  P +   + +I  
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L K GK  EA   L  MV +G  P+ + YS+    L    RV+  +++F +I       D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN +IS LCK      A D F  M++ G +P+ +TY +LI G    G   +A   LS
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 559 RMLEK 563
            +  +
Sbjct: 626 ELCSR 630



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T + ++++N + + G +D A+ L R++   GC  ++  YN ++ GLC + R  +  EL+
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM      P   T N++   LCR         ++ +M   G  P ++    +I  +CK 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A   L  M   G  P++VCY+  + GL   +R   A EL  ++    C  D V +
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI++   C+   V    +L  +M++ G +P V TY  +ING+CK G ID+A++ L  M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-S 418

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                P+ ++YT ++ GLC AGR  DA  L ++M ++GC PN +TF  LI  LCK     
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+   + M   G  PD+  +  +I           A E+L  M
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 239/554 (43%), Gaps = 53/554 (9%)

Query: 64  PNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           PN Y++  ++  LC    + D +E+ L EM   G          +L+  C SG F  ++ 
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEV-LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +   G  +D    +++L A  + G VD+A  L+ ++       +  ++  ++ G  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R     +L D+M +   A +   ++ +IG LC+N   E   ++ ++M   G TPD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + + +I     EG L +                  N I+  + S G              
Sbjct: 288 MYATIIDGICKEGHLEV-----------------ANEILNRMPSYG-------------- 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + PN   ++ ++  L    +   A  L  EM Q  C  +   
Sbjct: 317 ------------------LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L+D  C +  ++   ELL +M   G  P   T  ++    C+   +  A+ L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +P     T+++K LC  G+ ++A   ++ M+Q+G  P+ V ++  I  L     V+
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
               + G +++ +     + +    S D + Y  +I  LC     D AI  +  M   GC
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRS-DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 602 APNRITFMALITGL 615
            PN  T+  LI GL
Sbjct: 598 MPNESTYTMLIKGL 611



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 36/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN  +F  ++  L   G++  AL +  EM+  GC     +Y+ +++  C S     S 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G        N +   +C +  V  A+ L+RK+   G E  +     ++K L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           C   +  +    + +MV+    P+IV ++  IG L      +   E+   +  HGC PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VV YN ++ GLC A+R  EAE+L +E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  K       T+N+L++ +C++G +D+ +  L +ML      PDVITYTT+I+G C  G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEG 405

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+A+ML   M   GC PN +++  ++ GLC   R   A      M ++G  P+   F 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI+    +     A E+LK+M
Sbjct: 466 TLINFLCKKGLVEQAIELLKQM 487



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 51/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++V+  C  +      LI  L   GL E  + +  Q+   G C P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTP 284

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y  +++ +CK   +++    L  M  YG   +      +L+  C++ ++ +A  + 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+      +D+  F+IL+  F + G VD+  EL+E+M       +  T+  +I+GF K+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D+A+ L   M+  G   +   Y +++ GLC   +   A +L S+M   G  P     
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP----- 459

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                     N +T   N+++  L   G ++QA  LL+ M+   
Sbjct: 460 --------------------------NPVTF--NTLINFLCKKGLVEQAIELLKQMLVN- 490

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                            SP+  S+  +I+ L K GK + AL L   M   G   N  +Y+
Sbjct: 491 ---------------GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++   L    R+ +  ++   ++++  +      N++   LC+R +   A++    M   
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN 595

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P     T+LIK L   G A EA   L+++   G L
Sbjct: 596 GCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E AN + +++   GL  PN   YN +L+ LC +      E  L EM       D  T
Sbjct: 300 GHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  +++ HG + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A +L  +M + G   +   ++ +I  LCK   +E
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G  E  L +  +  ++ ++  T++ +SI 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +++   +       + I D           T+  +   ++ +I++L K  + 
Sbjct: 539 CALSREGRVNKVIQMF------DNIKDT----------TIRSDAVLYNAVISSLCKRWET 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           D A+  F  M   GCM N   Y  LI GL +    +E+ ELL E+   G    H 
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 171/667 (25%), Positives = 289/667 (43%), Gaps = 78/667 (11%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           RE    P+  SYN L+        ++L      +M          T T L+  YC +G+ 
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 118 DKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D+A  V  E+   G    E  +S LL  + K  ++  A +LI+ +   +I +N   + +L
Sbjct: 386 DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTIL 445

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I GF +   V KA Q+   M   G   D   Y  +I G+CK   +    ++ S M+ SG+
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 505

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR--ILVS---NGSIDQ 291
            P+  + + L+      G     +K      D+    L+ NS++   +L S    G I +
Sbjct: 506 LPNNVLYTTLVFYFCKAGHAKEALKYFV---DIYRSGLVANSVIHNALLCSFYREGMIAE 562

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A    Q M + +                +S + +SF+ II++  + G +  A S++  M 
Sbjct: 563 AEQFKQYMSRMK----------------ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 606

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + G   ++  Y +L+ GLC    L ++ E +  + E        TLN++   +C+   + 
Sbjct: 607 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 666

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL+L  KM  +   P     T+L+   CK GK + A   L  M+++G +PD + Y+  +
Sbjct: 667 EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726

Query: 472 GGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
            GL++  +V  A  +F++I C  G   D +AYN +++G  K  ++ E E L   M    +
Sbjct: 727 NGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEV 786

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR----- 585
            PS A+YN+L++G+ K G + +  L L R + KE   PD +TY  LI GLC  G      
Sbjct: 787 YPSSASYNILMHGYIKKGQLSRT-LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAV 845

Query: 586 ------------PDD-----------------------AIMLW-----------NEMEEK 599
                       PD+                       + M W            +M+  
Sbjct: 846 KFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKAL 905

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P+ +   +++ GLCKC +   A++ F  +   GM P +  F  L+     E     A
Sbjct: 906 GVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA 965

Query: 660 FEVLKEM 666
           F + + M
Sbjct: 966 FHLKQLM 972



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 158/600 (26%), Positives = 275/600 (45%), Gaps = 38/600 (6%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI     +G V +A  +   +  +G+  P+  +Y+ L+  +CK   +   +  L  MQ  
Sbjct: 445  LIDGFCQLGEVSKAKQILKCMLADGI-DPDVITYSALINGMCKMGMIHETKEILSRMQKS 503

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKA 154
            G   +    T L+  +C +G   +AL  F +I   G V   V  + LL +F + G + +A
Sbjct: 504  GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEA 563

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +  + M    I  +  +F  +I  + ++  V +A  ++D M + G+  D   Y  ++ G
Sbjct: 564  EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 623

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
            LC+   L  A +    +       D + L+ L+      G L   L + E    R++   
Sbjct: 624  LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 683

Query: 273  TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            T     ++      G +  A  LLQ M++               KG V P+T ++  ++N
Sbjct: 684  TYTYTILLDGFCKRGKVVPALILLQMMLE---------------KGLV-PDTIAYTCLLN 727

Query: 333  TLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L+ +G++  A  +F+E+  + G   +   YN++++G     ++ E   L+R M E+   
Sbjct: 728  GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 787

Query: 392  PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
            P+  + N +     ++  +   L L R M  +G +P      LLI  LC++G    A +F
Sbjct: 788  PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 847

Query: 452  LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF----------------RDICAHGC 495
            L  MV EG  PD + +   I    +  ++  AL+LF                 D+ A G 
Sbjct: 848  LEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGV 907

Query: 496  CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             P  VA + I+ GLCK  +V EA  +F+ ++  G++P++AT+  L++G CK   ID A  
Sbjct: 908  VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA-F 966

Query: 556  CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             L +++E      DV+TY  LI GLC      DA+ L+ EM+ KG  PN  T++ L   +
Sbjct: 967  HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 1026



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 278/614 (45%), Gaps = 32/614 (5%)

Query: 62  CVPNN-YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           C P N +S + L+ A  K   V      +  M + G+    ++   +L       + +  
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                E +D  + +D    +I+L +    G++ KA  ++++M +C +  N  T+  +++ 
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNW 273

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +VKK R   AL++ D M K+G  +D   Y+++I  LCK K+   A  L   M+   +TPD
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 240 FEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAY 293
               + LI     EG++ L +    +         V T T L +   R    NG  D+A 
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR----NGRTDEAR 389

Query: 294 NLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            +L  M I G                 V P+  ++  ++N   K  KL  AL L + +  
Sbjct: 390 RVLYEMQITG-----------------VRPSELTYSALLNGYCKHSKLGPALDLIKYLRS 432

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                N  +Y  LIDG C    + ++ ++L+ M   G  P   T +++   +C+   +  
Sbjct: 433 RSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHE 492

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
              ++ +M+  G  P     T L+   CK G A EA ++  D+ + G + + V ++A + 
Sbjct: 493 TKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLC 552

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
                  +  A +  + +       DV ++N II   C+   V EA  +++ M+  G  P
Sbjct: 553 SFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TY  L+ G C+ G++ QA   +  +LEK + + D  T  TL+ G+C  G  D+A+ L
Sbjct: 613 DICTYGSLLRGLCQGGHLVQAKEFMVYLLEK-ACAIDEKTLNTLLVGICKHGTLDEALDL 671

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             +M  +   P+  T+  L+ G CK  +   AL+  +MM EKG+ PD   +  L++  ++
Sbjct: 672 CEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 731

Query: 653 ELNPPLAFEVLKEM 666
           E     A  + +E+
Sbjct: 732 EGQVKAASYMFQEI 745



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/613 (24%), Positives = 272/613 (44%), Gaps = 26/613 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  + A  + D +++ G+   + Y+YN +++ LCK        + LK M++     D+ +
Sbjct: 278 GRCKSALRILDDMEKNGI-EADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +   G+ + A+ +FN+++          ++ L+  + + G  D+A  ++  M 
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +R +E T+  L++G+ K S++  AL L   +     + +  MY ++I G C+  ++ 
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WEDRDVNTMTLLCNSI 279
            A Q+   M   GI PD    S LI      G +    KEI    +   V    +L  ++
Sbjct: 457 KAKQILKCMLADGIDPDVITYSALINGMCKMG-MIHETKEILSRMQKSGVLPNNVLYTTL 515

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +      G   +A                    + I++  +  N+   + ++ +  ++G 
Sbjct: 516 VFYFCKAGHAKEALKYF----------------VDIYRSGLVANSVIHNALLCSFYREGM 559

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A    + M+++    +V  +N +ID  C    + E++ +   M   G+ P   T  S
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 619

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH-NTLLIKELCKHGKAMEAFRFLTDMVQE 458
           + R LC+   +V A   +  +  +      K  NTLL+  +CKHG   EA      MV  
Sbjct: 620 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG-ICKHGTLDEALDLCEKMVTR 678

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             LPD   Y+  + G     +V  AL L + +   G  PD +AY  +++GL    +V  A
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 738

Query: 519 EDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
             +F E+I K GL      YN ++NG+ K G I++    +  M E E   P   +Y  L+
Sbjct: 739 SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEV-YPSSASYNILM 797

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            G    G+    + L+ +M ++G  P+ +T+  LI GLC+      A+     M  +G+ 
Sbjct: 798 HGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVF 857

Query: 638 PDMFVFVALISAF 650
           PD   F  LI AF
Sbjct: 858 PDNLAFDILIKAF 870



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 159/695 (22%), Positives = 296/695 (42%), Gaps = 84/695 (12%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI      G +  A  +F+Q+ R+ L  P+  +Y  L++  C++   D     L EMQ  
Sbjct: 340  LIHGFFGEGKINLAIYIFNQMLRQSL-KPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
            G    + T + LL  YC   +   AL +   +      ++  +++IL+  F + GEV KA
Sbjct: 399  GVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKA 458

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++++ M    I  +  T+  LI+G  K   + +  ++  +M KSG   +  +Y  ++  
Sbjct: 459  KQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFY 518

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTM 272
             CK    + AL+ + ++  SG+  +  I + L+ S   EG +      K+      ++  
Sbjct: 519  FCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFD 578

Query: 273  TLLCNSIMRILVSNGSIDQAYN-------------------LLQAMIKGEPIADVGVEML 313
                N I+      G++ +A++                   LL+ + +G  +      M+
Sbjct: 579  VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638

Query: 314  MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
             + +   + +  + + ++  + K G LD AL L  +M     + + + Y  L+DG C   
Sbjct: 639  YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 698

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRR----------QDVV------------ 411
            ++  +  LL+ M E G  P       +   L             Q+++            
Sbjct: 699  KVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAY 758

Query: 412  ----------GALNLVRKMRVQGHE----PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
                      G +N + ++    HE    P      +L+    K G+         DMV+
Sbjct: 759  NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 818

Query: 458  EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            EG  PD V Y   I GL +   +++A++    +   G  PD +A++I+I    +  +++ 
Sbjct: 819  EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 878

Query: 518  AEDLFN----------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            A  LF+                +M   G++PS    + ++ G CK G +++A++  S ++
Sbjct: 879  ALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 938

Query: 562  EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK---- 617
             +    P + T+TTL+ GLC   + DDA  L   ME  G   + +T+  LITGLC     
Sbjct: 939  -RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCI 997

Query: 618  CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            CD    AL  +  MK KG+ P++  ++ L  A  +
Sbjct: 998  CD----ALDLYEEMKSKGLLPNITTYITLTGAMYA 1028



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 243/528 (46%), Gaps = 37/528 (7%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G  +EA   F  + R GL V N+  +N LL +  +   +   E   + M      +D  +
Sbjct: 523  GHAKEALKYFVDIYRSGL-VANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVAS 581

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
               ++  YC  G   +A SV++ ++ HGW  D   +  LL    + G + +A E +  + 
Sbjct: 582  FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 641

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            +    ++EKT   L+ G  K   +D+AL L +KM       D   Y +++ G CK  ++ 
Sbjct: 642  EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
             AL L   M   G+ PD    + L+    +EG++   + + +EI     +    +  NS+
Sbjct: 702  PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 761

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            M   +  G I++   L++ M + E                V P+++S++I+++  +K G+
Sbjct: 762  MNGYLKGGQINEIERLMRNMHENE----------------VYPSSASYNILMHGYIKKGQ 805

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            L   L L+R+M + G   +   Y  LI GLC    +E + + L +M   G  P +   + 
Sbjct: 806  LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI 865

Query: 400  MFRCLCRRQ----------------DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            + +    +                 D+ GA  L   M+  G  P     + +++ LCK G
Sbjct: 866  LIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 925

Query: 444  KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
            K  EA    + +++ G +P I  ++  + GL    ++D A  L + + + G   DVV YN
Sbjct: 926  KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 985

Query: 504  IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            ++I+GLC  + + +A DL+ EM +KGL+P++ TY  L      +G + 
Sbjct: 986  VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 1033



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 139/616 (22%), Positives = 257/616 (41%), Gaps = 55/616 (8%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N +L +LC    +   E  L++M++     +  T   +L  Y   G+   AL + +++  
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +G   D + ++I++    K     +A  L++RM + N+  +E ++  LIHGF  + +++ 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ +F++M +       A Y  +I G C+N + + A ++  EM+ +G+ P     S L+ 
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLN 412

Query: 249 SCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                 +L   L + +    R ++    +   ++      G + +A  +L+ M+     A
Sbjct: 413 GYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCML-----A 467

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D            + P+  ++  +IN + K G +     +   M + G + N  LY  L+
Sbjct: 468 D-----------GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLV 516

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
              C +   +E+ +   ++  SG        N++     R   +  A    + M      
Sbjct: 517 FYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKIS 576

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL------------ 474
             V     +I   C+ G  +EAF    +MV+ G+ PDI  Y + + GL            
Sbjct: 577 FDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEF 636

Query: 475 ----------IDIKRV-------------DLALELFRDICAHGCCPDVVAYNIIISGLCK 511
                     ID K +             D AL+L   +      PD   Y I++ G CK
Sbjct: 637 MVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 696

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +V  A  L   M+ KGL+P    Y  L+NG    G +  A      ++ KE    D I
Sbjct: 697 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 756

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y ++++G    G+ ++   L   M E    P+  ++  L+ G  K  +    L  +R M
Sbjct: 757 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 816

Query: 632 KEKGMKPDMFVFVALI 647
            ++G+KPD   +  LI
Sbjct: 817 VKEGIKPDNVTYRLLI 832



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 18/242 (7%)

Query: 17   LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
            L +D+VK            LI  L   GL+E A    +++  EG+  P+N +++ L++A 
Sbjct: 812  LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV-FPDNLAFDILIKAF 870

Query: 77   CK----SCSVDLVE-----------MRLKE-MQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             +    S ++ L               LKE M+  G    +   + +++  C  G+ ++A
Sbjct: 871  SEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 930

Query: 121  LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            + VF+ I+  G V     F+ L+    K  ++D A  L + M+ C ++++  T+ VLI G
Sbjct: 931  IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 990

Query: 180  FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
               K  +  AL L+++M   G   +   Y  + G +     ++   +L  +++  GI P 
Sbjct: 991  LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050

Query: 240  FE 241
            ++
Sbjct: 1051 YK 1052


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 242/503 (48%), Gaps = 57/503 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  ++ G   + R+  AL++ D+M+  G A    MY VI+   C++     ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G T D                                 T  CN ++  +   G 
Sbjct: 170 EAMHAKGCTLD---------------------------------TGNCNLVLNAICEQGC 196

Query: 289 IDQAYNLLQ---------------AMIKGEPIA----DVGVEMLMIFKGTVSPNTSSFDI 329
           +D+A  LL+               A++KG  +A    DV   M  + +   +PN  +F+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L ++G  +    +  +M++ GC  ++ +Y  +IDG+C    LE + E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW--VKHNTLLIKELCKHGKAME 447
            KP     N++ + LC  +    A  L+ +M  Q   P   V  N +L+   C++G    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTFN-ILVDFFCQNGLVDR 374

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L  M+  G +PD++ Y+  I G      +D A+ L + + + GC P+ V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC A R  +AE+L ++MI +G  P+  T+N LIN  CK G ++QA+  L +ML     S
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML-VNGCS 493

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+T+IDGL  AG+ ++A+ L N M  KG +PN I + ++   L +  R    +  
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  +K+  ++ D  ++ A+IS+ 
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSL 576



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 255/545 (46%), Gaps = 30/545 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  ++R L + G + +A  + D++  +G C P    Y+ +LEA C+S      
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGFRNS 165

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L+ M   G   D      +L   C  G  D+A+ +  ++   G   + V ++ +L  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 145 F---SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
                +WG+V+   EL++ M   +   N  TF  LI    +    ++  ++  +M++ G 
Sbjct: 226 LCMAKRWGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTL 258
             D  MY  II G+CK   LE+A ++ + M   G+ P+    + ++   CS E   E   
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L+ E+++ +D     +  N ++     NG +D+   LL+ M+    + DV          
Sbjct: 343 LLSEMFQ-KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV---------- 391

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                  ++  +IN   K+G +D A+ L + M+  GC  N   Y  ++ GLC++ R  ++
Sbjct: 392 ------ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL+ +M + G  P   T N++   LC++  V  A+ L+++M V G  P +   + +I  
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L K GK  EA   L  MV +G  P+ + YS+    L    RV+  +++F +I       D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN +IS LCK      A D F  M++ G +P+ +TY +LI G    G   +A   LS
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 559 RMLEK 563
            +  +
Sbjct: 626 ELCSR 630



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T + ++++N + + G +D A+ L R++   GC  ++  YN ++ GLC + R  +  EL+
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM      P   T N++   LCR         ++ +M   G  P ++    +I  +CK 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A   L  M   G  P++VCY+  + GL   +R   A EL  ++    C  D V +
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI++   C+   V    +L  +M++ G +P V TY  +ING+CK G ID+A++ L  M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-S 418

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                P+ ++YT ++ GLC AGR  DA  L ++M ++GC PN +TF  LI  LCK     
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+   + M   G  PD+  +  +I           A E+L  M
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 239/554 (43%), Gaps = 53/554 (9%)

Query: 64  PNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           PN Y++  ++  LC    + D +E+ L EM   G          +L+  C SG F  ++ 
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEV-LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +   G  +D    +++L A  + G VD+A  L+ ++       +  ++  ++ G  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R     +L D+M +   A +   ++ +IG LC+N   E   ++ ++M   G TPD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + + +I     EG L +                  N I+  + S G              
Sbjct: 288 MYATIIDGICKEGHLEV-----------------ANEILNRMPSYG-------------- 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + PN   ++ ++  L    +   A  L  EM Q  C  +   
Sbjct: 317 ------------------LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L+D  C +  ++   ELL +M   G  P   T  ++    C+   +  A+ L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +P     T+++K LC  G+ ++A   ++ M+Q+G  P+ V ++  I  L     V+
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
               + G +++ +     + +    S D + Y  +I  LC     D AI  +  M   GC
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRS-DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 602 APNRITFMALITGL 615
            PN  T+  LI GL
Sbjct: 598 MPNESTYTMLIKGL 611



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 36/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN  +F  ++  L   G++  AL +  EM+  GC     +Y+ +++  C S     S 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G        N +   +C +  V  A+ L+RK+   G E  +     ++K L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           C   +  +    + +MV+    P+IV ++  IG L      +   E+   +  HGC PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VV YN ++ GLC A+R  EAE+L +E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  K       T+N+L++ +C++G +D+ +  L +ML      PDVITYTT+I+G C  G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEG 405

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+A+ML   M   GC PN +++  ++ GLC   R   A      M ++G  P+   F 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI+    +     A E+LK+M
Sbjct: 466 TLINFLCKKGLVEQAIELLKQM 487



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 51/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++V+  C  +      LI  L   GL E  + +  Q+   G C P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTP 284

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y  +++ +CK   +++    L  M  YG   +      +L+  C++ ++ +A  + 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+      +D+  F+IL+  F + G VD+  EL+E+M       +  T+  +I+GF K+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D+A+ L   M+  G   +   Y +++ GLC   +   A +L S+M   G  P     
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP----- 459

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                     N +T   N+++  L   G ++QA  LL+ M+   
Sbjct: 460 --------------------------NPVTF--NTLINFLCKKGLVEQAIELLKQMLVN- 490

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                            SP+  S+  +I+ L K GK + AL L   M   G   N  +Y+
Sbjct: 491 ---------------GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++   L    R+ +  ++   ++++  +      N++   LC+R +   A++    M   
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN 595

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P     T+LIK L   G A EA   L+++   G L
Sbjct: 596 GCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E AN + +++   GL  PN   YN +L+ LC +      E  L EM       D  T
Sbjct: 300 GHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  +++ HG + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A +L  +M + G   +   ++ +I  LCK   +E
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G  E  L +  +  ++ ++  T++ +SI 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +++   +       + I D           T+  +   ++ +I++L K  + 
Sbjct: 539 CALSREGRVNKVIQMF------DNIKDT----------TIRSDAVLYNAVISSLCKRWET 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           D A+  F  M   GCM N   Y  LI GL +    +E+ ELL E+   G    H 
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 242/503 (48%), Gaps = 57/503 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  ++ G   + R+  AL++ D+M+  G A    MY VI+   C++     ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G T D                                 T  CN ++  +   G 
Sbjct: 170 EAMHAKGCTLD---------------------------------TGNCNLVLNAICEQGC 196

Query: 289 IDQAYNLLQ---------------AMIKGEPIA----DVGVEMLMIFKGTVSPNTSSFDI 329
           +D+A  LL+               A++KG  +A    DV   M  + +   +PN  +F+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L ++G  +    +  +M++ GC  ++ +Y  +IDG+C    LE + E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW--VKHNTLLIKELCKHGKAME 447
            KP     N++ + LC  +    A  L+ +M  Q   P   V  N +L+   C++G    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTFN-ILVDFFCQNGLVDR 374

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L  M+  G +PD++ Y+  I G      +D A+ L + + + GC P+ V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC A R  +AE+L ++MI +G  P+  T+N LIN  CK G ++QA+  L +ML     S
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML-VNGCS 493

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+T+IDGL  AG+ ++A+ L N M  KG +PN I + ++   L +  R    +  
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  +K+  ++ D  ++ A+IS+ 
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSL 576



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 255/545 (46%), Gaps = 30/545 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  ++R L + G + +A  + D++  +G C P    Y+ +LEA C+S      
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGFRNS 165

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L+ M   G   D      +L   C  G  D+A+ +  ++   G   + V ++ +L  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 145 F---SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
                +WG+V+   EL++ M   +   N  TF  LI    +    ++  ++  +M++ G 
Sbjct: 226 LCMAKRWGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTL 258
             D  MY  II G+CK   LE+A ++ + M   G+ P+    + ++   CS E   E   
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L+ E+++ +D     +  N ++     NG +D+   LL+ M+    + DV          
Sbjct: 343 LLSEMFQ-KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV---------- 391

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                  ++  +IN   K+G +D A+ L + M+  GC  N   Y  ++ GLC++ R  ++
Sbjct: 392 ------ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL+ +M + G  P   T N++   LC++  V  A+ L+++M V G  P +   + +I  
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L K GK  EA   L  MV +G  P+ + YS+    L    RV+  +++F +I       D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN +IS LCK      A D F  M++ G +P+ +TY +LI G    G   +A   LS
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 559 RMLEK 563
            +  +
Sbjct: 626 ELCSR 630



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T + ++++N + + G +D A+ L R++   GC  ++  YN ++ GLC + R  +  EL+
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM      P   T N++   LCR         ++ +M   G  P ++    +I  +CK 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A   L  M   G  P++VCY+  + GL   +R   A EL  ++    C  D V +
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI++   C+   V    +L  +M++ G +P V TY  +ING+CK G ID+A++ L  M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-S 418

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                P+ ++YT ++ GLC AGR  DA  L ++M ++GC PN +TF  LI  LCK     
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+   + M   G  PD+  +  +I           A E+L  M
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 239/554 (43%), Gaps = 53/554 (9%)

Query: 64  PNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           PN Y++  ++  LC    + D +E+ L EM   G          +L+  C SG F  ++ 
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEV-LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +   G  +D    +++L A  + G VD+A  L+ ++       +  ++  ++ G  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R     +L D+M +   A +   ++ +IG LC+N   E   ++ ++M   G TPD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + + +I     EG L +                  N I+  + S G              
Sbjct: 288 MYATIIDGICKEGHLEV-----------------ANEILNRMPSYG-------------- 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + PN   ++ ++  L    +   A  L  EM Q  C  +   
Sbjct: 317 ------------------LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L+D  C +  ++   ELL +M   G  P   T  ++    C+   +  A+ L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +P     T+++K LC  G+ ++A   ++ M+Q+G  P+ V ++  I  L     V+
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
               + G +++ +     + +    S D + Y  +I  LC     D AI  +  M   GC
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRS-DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 602 APNRITFMALITGL 615
            PN  T+  LI GL
Sbjct: 598 MPNESTYTMLIKGL 611



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 36/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN  +F  ++  L   G++  AL +  EM+  GC     +Y+ +++  C S     S 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G        N +   +C +  V  A+ L+RK+   G E  +     ++K L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           C   +  +    + +MV+    P+IV ++  IG L      +   E+   +  HGC PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VV YN ++ GLC A+R  EAE+L +E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  K       T+N+L++ +C++G +D+ +  L +ML      PDVITYTT+I+G C  G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEG 405

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+A+ML   M   GC PN +++  ++ GLC   R   A      M ++G  P+   F 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI+    +     A E+LK+M
Sbjct: 466 TLINFLCKKGLVEQAIELLKQM 487



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 51/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++V+  C  +      LI  L   GL E  + +  Q+   G C P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTP 284

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y  +++ +CK   +++    L  M  YG   +      +L+  C++ ++ +A  + 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+      +D+  F+IL+  F + G VD+  EL+E+M       +  T+  +I+GF K+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D+A+ L   M+  G   +   Y +++ GLC   +   A +L S+M   G  P     
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP----- 459

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                     N +T   N+++  L   G ++QA  LL+ M+   
Sbjct: 460 --------------------------NPVTF--NTLINFLCKKGLVEQAIELLKQMLVN- 490

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                            SP+  S+  +I+ L K GK + AL L   M   G   N  +Y+
Sbjct: 491 ---------------GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++   L    R+ +  ++   ++++  +      N++   LC+R +   A++    M   
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN 595

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P     T+LIK L   G A EA   L+++   G L
Sbjct: 596 GCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E AN + +++   GL  PN   YN +L+ LC +      E  L EM       D  T
Sbjct: 300 GHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  +++ HG + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A +L  +M + G   +   ++ +I  LCK   +E
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G  E  L +  +  ++ ++  T++ +SI 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +++   +       + I D           T+  +   ++ +I++L K  + 
Sbjct: 539 CALSREGRVNKVIQMF------DNIKDT----------TIRSDAVLYNAVISSLCKRWET 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           D A+  F  M   GCM N   Y  LI GL +    +E+ ELL E+   G    H 
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 228/491 (46%), Gaps = 53/491 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF +  +  KA  + + + +SG   D   Y+V+I G CK+ +++ ALQ+   M    
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 154

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD                                  +  N+I+R L  +G + QA  +
Sbjct: 155 VAPDV---------------------------------VTYNTILRTLCDSGKLKQAMEV 181

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L   ++ E                  P+  ++ I+I    K+  +  A+ L  EM   G 
Sbjct: 182 LDRQLQKE----------------CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 225

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  YN LI+G+C   RL+E+ + L  M   G +P   T N + R +C     + A  
Sbjct: 226 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 285

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+  M  +G  P V    +LI  LC+ G    A   L  M   G  P+ + Y+  + G  
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 345

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             K++D A+E    + + GC PD+V YN +++ LCK  +V  A ++ N++ +KG  P + 
Sbjct: 346 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 405

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+G  K G  ++A+  L  M  ++   PD+ITY++L+ GL   G+ D+AI  +++
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +E  G  PN IT+ +++ GLCK  +   A+     M  K  KP    +  LI     E  
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 524

Query: 656 PPLAFEVLKEM 666
              A ++L E+
Sbjct: 525 AKEALDLLNEL 535



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 225/474 (47%), Gaps = 28/474 (5%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T L++ +C  G+  KA  V   +   G V D   +++L+  + K GE+D A ++++RM  
Sbjct: 96  TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM-- 153

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            N+  +  T+  ++       ++ +A+++ D+  +     D   Y ++I   CK   +  
Sbjct: 154 -NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           A++L  EM+  G  PD    + LI     EG L   +K +            +  N I+R
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            + S G    A  LL  M++               KG  SP+  +F+I+IN L + G L 
Sbjct: 273 SMCSTGRWMDAEKLLSDMLR---------------KG-CSPSVVTFNILINFLCRQGLLG 316

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +  +M   GC  N   YN L+ G C   +++ + E L  M   G  P   T N++ 
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 376

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   V  A+ ++ ++  +G  P +     +I  L K GK   A + L +M ++G  
Sbjct: 377 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDI+ YS+ + GL    +VD A++ F D+   G  P+ + YN I+ GLCK+++   A D 
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDV 570
              MI+K   P+ ATY +LI G    G   +A+     LC SR L K+S +  V
Sbjct: 497 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC-SRGLVKKSSAEQV 549



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 199/393 (50%), Gaps = 23/393 (5%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADV-------------------GVEMLMIFKGTV 320
           +R LV NG ++  +  L++M+    I D+                      M ++ +   
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  +++++I+   K G++D AL +   M       +V  YN ++  LC+S +L+++ E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L    +    P   T   +    C+   V  A+ L+ +MR +G +P V    +LI  +C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  EA +FL +M   G  P+++ ++  +  +    R   A +L  D+   GC P VV
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +NI+I+ LC+   +  A D+  +M   G  P+  +YN L++G+CK   +D+A+  L  M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + +    PD++TY TL+  LC  G+ D A+ + N++  KGC+P  IT+  +I GL K  +
Sbjct: 361 VSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              A+     M+ KG+KPD+  + +L+S    E
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 452



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 227/499 (45%), Gaps = 58/499 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR    +G  ++A  + + +++ G  VP+  +YN L+   CKS  +D     L  M   
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSG-AVPDVITYNVLISGYCKSGEIDNALQVLDRMN-- 154

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFN-EIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
               D  T   +L+  C+SG+  +A+ V + ++    + D   ++IL+ A  K   V +A
Sbjct: 155 -VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M +   + +  T+ VLI+G  K+ R+D+A++  + M   G   +   +++I+  
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           +C   +   A +L S+M   G +P     + LI     +G L   + +I E   ++  T 
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI-DILEKMPMHGCTP 332

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIIN 332
             NS+            +YN L      E   D  +E L  M+ +G   P+  +++ ++ 
Sbjct: 333 --NSL------------SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY-PDIVTYNTLLT 377

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L KDGK+D+A+ +  +++  GC   +  YN +IDGL    + E + +LL EM   G KP
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T +S                                   L+  L + GK  EA +F 
Sbjct: 438 DIITYSS-----------------------------------LVSGLSREGKVDEAIKFF 462

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            D+   G  P+ + Y++ + GL   ++ D A++    + +  C P    Y I+I G+   
Sbjct: 463 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYE 522

Query: 513 QRVAEAEDLFNEMITKGLI 531
               EA DL NE+ ++GL+
Sbjct: 523 GLAKEALDLLNELCSRGLV 541



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 2/239 (0%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+++  C  S      LI  L   GL+  A  + +++   G C PN+ SYN LL   
Sbjct: 286 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGF 344

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK   +D     L  M   G   D  T   LL   C  G+ D A+ + N++   G     
Sbjct: 345 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++ ++   SK G+ ++A +L++ M    ++ +  T+  L+ G  ++ +VD+A++ F  
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 464

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +   G   +A  Y+ I+ GLCK++Q + A+   + M      P     + LI   + EG
Sbjct: 465 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 523



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 20  DVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           D++ SR C+        L+  L   G V+ A  + +Q+  +G C P   +YN +++ L K
Sbjct: 358 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNTVIDGLSK 416

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
               +     L EM+  G   D  T + L+      G+ D+A+  F+++   G     + 
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 476

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ +++   K  + D+A + +  M     +  E T+ +LI G   +    +AL L +++ 
Sbjct: 477 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 536

Query: 198 KSGFASDAAMYDVII 212
             G    ++   V +
Sbjct: 537 SRGLVKKSSAEQVAV 551


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 261/591 (44%), Gaps = 55/591 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           TL+ LL       +F     +F+E ++ G   D +  S ++ +  +  +  +A E I  M
Sbjct: 192 TLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWM 251

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           +     L+  T+ VLIHG  K  RV +A+++   +   G A+D   Y  ++ G C+ +Q 
Sbjct: 252 EANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQF 311

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNS 278
           E  +QL  EM   G +P    +S L+     +G++     LV ++     V  +  + N+
Sbjct: 312 EAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNL-FVYNA 370

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L   G +D+A  L   M             LM     + PN  ++ I+I++  + G
Sbjct: 371 LINSLCKGGDLDKAELLYSNM------------SLM----NLRPNGITYSILIDSFCRSG 414

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +LD+A+S F  M Q G  + V+ YN+LI+G C    L  +  L  EM   G +PT  T  
Sbjct: 415 RLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFT 474

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C+   V  A  L  KM   G  P V   T LI  LC   K  EA     ++V+ 
Sbjct: 475 SLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER 534

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              P  V Y+  I G     ++D A EL  D+   G  PD   Y  +ISGLC   RV++A
Sbjct: 535 KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK--------------- 563
           +D  +++  + +  +   Y+ L++G+C+ G + +A+     M+++               
Sbjct: 595 KDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654

Query: 564 -------------------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                              +   PD + YT++ID     G    A   W+ M  + C PN
Sbjct: 655 ALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN 714

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
            +T+ AL+ GLCK      A + F+ M+   + P+   +   +     E N
Sbjct: 715 VVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 282/637 (44%), Gaps = 57/637 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LFD+    G+  P+ Y+ + ++ ++C+       + +++ M+  G+     T   L+   
Sbjct: 212 LFDESVNAGV-RPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGL 270

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C   +  +A+ V   +   G   + V +  L++ F +  + +   +L++ M +      E
Sbjct: 271 CKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTE 330

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
                L+ G  K+ ++D A +L  K+ + GF  +  +Y+ +I  LCK   L+ A  LYS 
Sbjct: 331 AAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSN 390

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    + P+    S LI S    G L + +   + DR      ++ + I       G   
Sbjct: 391 MSLMNLRPNGITYSILIDSFCRSGRLDVAIS--YFDR------MIQDGI-------GETV 435

Query: 291 QAYN-LLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            AYN L+    K G+  A   + + M  KG V P  ++F  +I+   KD ++  A  L+ 
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKG-VEPTATTFTSLISGYCKDLQVQKAFKLYN 494

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M   G   NV+ +  LI GLC++N++ E+ EL  E+ E   KPT  T N +    CR  
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDG 554

Query: 409 DVVGALNLVRKMRVQG-------------------------------HEPWVKHNTL--- 434
            +  A  L+  M  +G                               H+  VK N +   
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYS 614

Query: 435 -LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            L+   C+ G+ MEA     +M+Q G   D+VC++  I G +         +L +D+   
Sbjct: 615 ALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ 674

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD V Y  +I    K     +A + ++ M+T+   P+V TY  L+NG CK+G +D+A
Sbjct: 675 GLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRA 734

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            L   RM +  +  P+ ITY   +D L   G   +AI L + M  KG   N +T   +I 
Sbjct: 735 GLLFKRM-QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIR 792

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G CK  R   A      M E G+ PD   +  LI  +
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 154/647 (23%), Positives = 265/647 (40%), Gaps = 130/647 (20%)

Query: 68  SYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           +YN L+  LCK   V + VE++ + +   G   D  T   L+  +C   QF+  + + +E
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVK-RSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDE 320

Query: 127 IIDHGW-------------------VDE-----------------HVFSILLVAFSKWGE 150
           +++ G+                   +D+                  V++ L+ +  K G+
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +DKA  L   M   N+R N  T+ +LI  F +  R+D A+  FD+M + G       Y+ 
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDV 269
           +I G CK   L  A  L+ EM   G+ P     + LI+  C D     L V++ ++    
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD-----LQVQKAFK---- 491

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                    +   ++ NG     Y    L+  +     +A+       + +  + P   +
Sbjct: 492 ---------LYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT 542

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++++I    +DGK+D A  L  +M Q G + + + Y  LI GLC++ R+ ++ + + ++ 
Sbjct: 543 YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGAL-------------------------------- 414
           +   K      +++    C+   ++ AL                                
Sbjct: 603 KQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRK 662

Query: 415 ---NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
              +L++ M  QG  P     T +I    K G   +AF     MV E   P++V Y+A +
Sbjct: 663 TFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722

Query: 472 GGLIDIKRVDLALELFRDICA---------HGCCPD------------------------ 498
            GL     +D A  LF+ + A         +GC  D                        
Sbjct: 723 NGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA 782

Query: 499 -VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
             V +NIII G CK  R  EA  + +EM   G+ P   TY+ LI  +C+SGN+  ++   
Sbjct: 783 NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLW 842

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
             ML +    PD++ Y  LI G C+ G  D A  L ++M  +G  P+
Sbjct: 843 DTMLNR-GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 235/515 (45%), Gaps = 22/515 (4%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F +L+  +V  SR+  A+ +   M  +    +      ++ GL K ++     +L+ E  
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 233 GSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLC-NSIMRILVSNGSID 290
            +G+ PD    S ++ S C  +  L    K  W + +   ++++  N ++  L     + 
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 291 QAYNLLQAMIKGEPIADV--------GVEMLMIFKGTV-----------SPNTSSFDIII 331
           +A  + +++      ADV        G   L  F+  +           SP  ++   ++
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K GK+D A  L  ++ + G + N+F+YN LI+ LC    L+++  L   M     +
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T + +    CR   +  A++   +M   G    V     LI   CK G    A   
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             +M  +G  P    +++ I G     +V  A +L+  +  +G  P+V  +  +ISGLC 
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             ++AEA +LF+E++ + + P+  TYN+LI G+C+ G ID+A   L  M +K    PD  
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK-GLVPDTY 576

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY  LI GLC  GR   A    +++ ++    N + + AL+ G C+  R   AL     M
Sbjct: 577 TYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEM 636

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++G+  D+     LI   L + +    F++LK+M
Sbjct: 637 IQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDM 671



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 236/515 (45%), Gaps = 33/515 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + +  LI      G ++ A   FD++ ++G+     Y+YN L+   CK   +   
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIG-ETVYAYNSLINGQCKFGDLSAA 454

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
           E    EM + G      T T L+  YC   Q  KA  ++N++ID+G   + + F+ L+  
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                ++ +A EL + + +  I+  E T+ VLI G+ +  ++DKA +L + M + G   D
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +I GLC   ++  A     ++    +  +    S L+     EG L   +    
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASC 634

Query: 265 E--DRDVNTMTLLCNSIMRILVSNGSIDQA-----YNLLQAMIKGEPIADVGVEMLMIFK 317
           E   R +N M L+C++++     +G++ Q      ++LL+ M       D G+       
Sbjct: 635 EMIQRGIN-MDLVCHAVL----IDGALKQPDRKTFFDLLKDM------HDQGLR------ 677

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+   +  +I+T  K+G    A   +  M    C  NV  Y  L++GLC +  ++ 
Sbjct: 678 ----PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +  L + M+ +   P   T       L +  ++  A+ L   M        V HN ++I+
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHN-IIIR 792

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK G+  EA + L++M + G  PD V YS  I        V  +++L+  +   G  P
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           D+VAYN++I G C    + +A +L ++M+ +G+IP
Sbjct: 853 DLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 194/424 (45%), Gaps = 27/424 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A  L++++   G+  PN Y++  L+  LC +  +        E+ +      + T  
Sbjct: 486 VQKAFKLYNKMIDNGI-TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L++ YC  G+ DKA  +  ++   G V D + +  L+      G V KA + I+ +   
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N++LNE  +  L+HG+ ++ R+ +AL    +M + G   D   + V+I G  K    +  
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF 664

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW-----EDRDVNTMTLLCNSI 279
             L  +M   G+ PD  I + +I + S EG       E W     E+   N +T    ++
Sbjct: 665 FDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF-ECWDLMVTEECFPNVVTY--TAL 721

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M  L   G +D+A  L + M                    V PN+ ++   ++ L K+G 
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAA----------------NVPPNSITYGCFLDNLTKEGN 765

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A+ L   M + G + N   +N +I G C   R  E+ ++L EM E+G  P   T ++
Sbjct: 766 MKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    CR  +V  ++ L   M  +G EP +    LLI   C +G+  +AF    DM++ G
Sbjct: 825 LIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRG 884

Query: 460 FLPD 463
            +PD
Sbjct: 885 IIPD 888



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 167/344 (48%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T  F++++   +   ++  A+ + + M     +  V   + L++GL    +    +EL 
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF 213

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            E   +G +P  +T +++ R +C  +D + A   +R M   G +  +    +LI  LCK 
Sbjct: 214 DESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG 273

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            +  EA      +  +G   D+V Y   + G   +++ +  ++L  ++   G  P   A 
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           + ++ GL K  ++ +A +L  ++   G +P++  YN LIN  CK G++D+A L  S M  
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM-S 392

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             +  P+ ITY+ LID  C +GR D AI  ++ M + G       + +LI G CK     
Sbjct: 393 LMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLS 452

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           AA   F  M  KG++P    F +LIS +  +L    AF++  +M
Sbjct: 453 AAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  +Y  L+  LCK+  +D   +  K MQ      +  T    L      G   +A+
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            + + ++     +    +I++  F K G   +A +++  M +  I  +  T+  LI+ + 
Sbjct: 771 GLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   V  +++L+D M   G   D   Y+++I G C N +L+ A +L  +M   GI PD +
Sbjct: 831 RSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890

Query: 242 ILSK 245
            L K
Sbjct: 891 YLQK 894



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 40/254 (15%)

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
           +TLL++E   H K +  F    D  +       + ++  +   +   R+  A+ + + + 
Sbjct: 127 HTLLLRE--SHPKCV--FSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMF 182

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP------------------- 532
           A+   P+V   + +++GL K ++     +LF+E +  G+ P                   
Sbjct: 183 ANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFL 242

Query: 533 ----------------SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
                           S+ TYN+LI+G CK   + +A+  + R L  +  + DV+TY TL
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVE-VKRSLGGKGLAADVVTYCTL 301

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + G C   + +  I L +EM E G +P       L+ GL K  +   A      +   G 
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361

Query: 637 KPDMFVFVALISAF 650
            P++FV+ ALI++ 
Sbjct: 362 VPNLFVYNALINSL 375


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 242/503 (48%), Gaps = 57/503 (11%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  ++ G   + R+  AL++ D+M+  G A    MY VI+   C++     ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G T D                                 T  CN ++  +   G 
Sbjct: 170 EAMHAKGCTLD---------------------------------TGNCNLVLNAICEQGC 196

Query: 289 IDQAYNLLQ---------------AMIKGEPIA----DVGVEMLMIFKGTVSPNTSSFDI 329
           +D+A  LL+               A++KG  +A    DV   M  + +   +PN  +F+ 
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  L ++G  +    +  +M++ GC  ++ +Y  +IDG+C    LE + E+L  M   G
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW--VKHNTLLIKELCKHGKAME 447
            KP     N++ + LC  +    A  L+ +M  Q   P   V  N +L+   C++G    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEM-FQKDCPLDDVTFN-ILVDFFCQNGLVDR 374

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L  M+  G +PD++ Y+  I G      +D A+ L + + + GC P+ V+Y I++ 
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC A R  +AE+L ++MI +G  P+  T+N LIN  CK G ++QA+  L +ML     S
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML-VNGCS 493

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+T+IDGL  AG+ ++A+ L N M  KG +PN I + ++   L +  R    +  
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  +K+  ++ D  ++ A+IS+ 
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSL 576



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 254/545 (46%), Gaps = 30/545 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  ++R L + G + +A  + D++  +G C P    Y+ +LEA C+S      
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGFRNS 165

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L+ M   G   D      +L   C  G  D+A+ +  ++   G   + V ++ +L  
Sbjct: 166 VRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225

Query: 145 F---SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
                +WG+V+   EL++ M   +   N  TF  LI    +    ++  ++  +M++ G 
Sbjct: 226 LCMAKRWGDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTL 258
             D  MY  II G+CK   LE+A ++ + M   G+ P+   +  + K + S     E   
Sbjct: 283 TPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L+ E+++ +D     +  N ++     NG +D+   LL+ M+    + DV          
Sbjct: 343 LLSEMFQ-KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV---------- 391

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                  ++  +IN   K+G +D A+ L + M+  GC  N   Y  ++ GLC++ R  ++
Sbjct: 392 ------ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL+ +M + G  P   T N++   LC++  V  A+ L+++M V G  P +   + +I  
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L K GK  EA   L  MV +G  P+ + YS+    L    RV+  +++F +I       D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN +IS LCK      A D F  M++ G +P+ +TY +LI G    G   +A   LS
Sbjct: 566 AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLS 625

Query: 559 RMLEK 563
            +  +
Sbjct: 626 ELCSR 630



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T + ++++N + + G +D A+ L R++   GC  ++  YN ++ GLC + R  +  EL+
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELM 239

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM      P   T N++   LCR         ++ +M   G  P ++    +I  +CK 
Sbjct: 240 DEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKE 299

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A   L  M   G  P++VCY+  + GL   +R   A EL  ++    C  D V +
Sbjct: 300 GHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTF 359

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI++   C+   V    +L  +M++ G +P V TY  +ING+CK G ID+A++ L  M  
Sbjct: 360 NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-S 418

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                P+ ++YT ++ GLC AGR  DA  L ++M ++GC PN +TF  LI  LCK     
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+   + M   G  PD+  +  +I           A E+L  M
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 239/554 (43%), Gaps = 53/554 (9%)

Query: 64  PNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           PN Y++  ++  LC    + D +E+ L EM   G          +L+  C SG F  ++ 
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEV-LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   +   G  +D    +++L A  + G VD+A  L+ ++       +  ++  ++ G  
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R     +L D+M +   A +   ++ +IG LC+N   E   ++ ++M   G TPD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + + +I     EG L +                  N I+  + S G              
Sbjct: 288 MYATIIDGICKEGHLEV-----------------ANEILNRMPSYG-------------- 316

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + PN   ++ ++  L    +   A  L  EM Q  C  +   
Sbjct: 317 ------------------LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N L+D  C +  ++   ELL +M   G  P   T  ++    C+   +  A+ L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +P     T+++K LC  G+ ++A   ++ M+Q+G  P+ V ++  I  L     V+
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
               + G +++ +     + +    S D + Y  +I  LC     D AI  +  M   GC
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRS-DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 602 APNRITFMALITGL 615
            PN  T+  LI GL
Sbjct: 598 MPNESTYTMLIKGL 611



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 36/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN  +F  ++  L   G++  AL +  EM+  GC     +Y+ +++  C S     S 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G        N +   +C +  V  A+ L+RK+   G E  +     ++K L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           C   +  +    + +MV+    P+IV ++  IG L      +   E+   +  HGC PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VV YN ++ GLC A+R  EAE+L +E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  K       T+N+L++ +C++G +D+ +  L +ML      PDVITYTT+I+G C  G
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEG 405

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+A+ML   M   GC PN +++  ++ GLC   R   A      M ++G  P+   F 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI+    +     A E+LK+M
Sbjct: 466 TLINFLCKKGLVEQAIELLKQM 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 51/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A+R   +  L  ++V+  C  +      LI  L   GL E  + +  Q+   G C P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTP 284

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y  +++ +CK   +++    L  M  YG   +      +L+  C++ ++ +A  + 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+      +D+  F+IL+  F + G VD+  EL+E+M       +  T+  +I+GF K+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +D+A+ L   M+  G   +   Y +++ GLC   +   A +L S+M   G  P     
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPP----- 459

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                     N +T   N+++  L   G ++QA  LL+ M+   
Sbjct: 460 --------------------------NPVTF--NTLINFLCKKGLVEQAIELLKQMLVN- 490

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                            SP+  S+  +I+ L K GK + AL L   M   G   N  +Y+
Sbjct: 491 ---------------GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++   L    R+ +  ++   ++++  +      N++   LC+R +   A++    M   
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN 595

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P     T+LIK L   G A EA   L+++   G L
Sbjct: 596 GCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E AN + +++   GL  PN   YN +L+ LC +      E  L EM       D  T
Sbjct: 300 GHLEVANEILNRMPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  +++ HG + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A +L  +M + G   +   ++ +I  LCK   +E
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G  E  L +  +  ++ ++  T++ +SI 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +++   +       + I D           T+  +   ++ +I++L K  + 
Sbjct: 539 CALSREGRVNKVIQMF------DNIKDT----------TIRSDAVLYNAVISSLCKRWET 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           D A+  F  M   GCM N   Y  LI GL +    +E+ ELL E+   G    H 
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 168/656 (25%), Positives = 309/656 (47%), Gaps = 28/656 (4%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L +L KS  + + +    E++ 
Sbjct: 431  LFINYYGKSGESLKAIKRYELMKSKGI-VPDVVAGNAVLYSLAKSGRLGMAKRVFHELKS 489

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    +   D+A+ VF+E+I+   V D    + L+    K G  ++
Sbjct: 490  IGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNE 549

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A ++   + + N+   + T+  L+ G  ++ +V + + L ++M  + +  +   Y+ ++ 
Sbjct: 550  AWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLD 609

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV--NT 271
             LCKN ++  AL +   M   G  PD    +  +     E  LT   +   + + V    
Sbjct: 610  CLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPD 669

Query: 272  MTLLCNSIMRILVSNGSIDQA-YNLLQAMIKGEPIAD--------------VGVEMLMIF 316
             T LC +I+   V NG +++A + L + +++    AD               G+E  + F
Sbjct: 670  YTTLC-TILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEF 728

Query: 317  KGTVSPNTSSFD-----IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
               ++ +    D      +I  L K  K   A  L ++   +G       YN LI GL +
Sbjct: 729  AENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVD 788

Query: 372  SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVK 430
             N ++ +  L  EM+  G  P  FT N +   + +   +   L + ++M  +G+E  +V 
Sbjct: 789  ENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVT 848

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            +NT+ I  L K     EA      ++ EGF P    Y   + GL+   +++ A +LF ++
Sbjct: 849  YNTI-ISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM 907

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              +GC P+   YNI+++G   A    +  +LF  M+ +G+ P + +Y +LI   C +G +
Sbjct: 908  LDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRL 967

Query: 551  DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            + + L   R L +    PD+ITY  LI GL  +GR ++A+ L+N+ME+ G APN  T+ +
Sbjct: 968  NDS-LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026

Query: 611  LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI  L K  +   A   +  + + G KP++F + ALI  +    +   AF    +M
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQM 1082



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 158/639 (24%), Positives = 297/639 (46%), Gaps = 26/639 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            ++  L   G +  A  +F ++K  G+C P+N +Y  +++   K+ + D       EM + 
Sbjct: 467  VLYSLAKSGRLGMAKRVFHELKSIGVC-PDNITYTMMIKCCSKASNADEAMKVFSEMIET 525

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
                D   +  L+     +G+ ++A  +F+E+ +      +  ++ LL    + G+V + 
Sbjct: 526  RCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEV 585

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              L+E M+  +   N  T+  ++    K   V+ AL +   MT  G   D + Y+  + G
Sbjct: 586  MHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHG 645

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------DR 267
            L K  +L  A +++ +MK   + PD+  L  ++ S    G +   +  + E         
Sbjct: 646  LVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKA 704

Query: 268  DVNTMTLLCNSIMRILVSNGSIDQAYNL-----------LQAMIKGEPIADVGVEMLMIF 316
            D ++   L   I++      SI+ A N+           L  +I+    +   +E   + 
Sbjct: 705  DRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELV 764

Query: 317  KG----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            K      VS  T S++ +I  L+ +  +D+A  LF EM ++GC  + F YN ++D +  S
Sbjct: 765  KKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKS 824

Query: 373  NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             R+E+  ++ +EM   G++ T+ T N++   L + + +  A++L  K+  +G  P     
Sbjct: 825  MRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTY 884

Query: 433  TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
              L+  L K GK  +A     +M+  G  P+   Y+  + G       +   ELF+++  
Sbjct: 885  GPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVD 944

Query: 493  HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             G  PD+ +Y ++I  LC A R+ ++   F ++   GL P + TYNLLI+G  +SG +++
Sbjct: 945  QGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEE 1004

Query: 553  AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            A+   + M EK   +P++ TY +LI  L   G+  +A  ++ E+ + G  PN  T+ ALI
Sbjct: 1005 AVSLFNDM-EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALI 1063

Query: 613  TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
             G         A   +  M   G  P+   ++ L +  L
Sbjct: 1064 GGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQLL 1102



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 171/720 (23%), Positives = 308/720 (42%), Gaps = 100/720 (13%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G  EEA  +  +++ EG C P+  +   L++ LC +  V   +    +M+   
Sbjct: 258 IRVLGQAGRFEEAYKILQKMEDEG-CKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASD 316

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   LL    ++G     + ++N +   G+ D  V ++ ++ A  + G VD+A 
Sbjct: 317 QKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEAS 376

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY------- 208
           ++ ++M    I   + ++  LI GF+K  R++ AL+LF+ M   G   +   Y       
Sbjct: 377 DVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYY 436

Query: 209 -----------------------DVIIG-----GLCKNKQLEMALQLYSEMKGSGITPD- 239
                                  DV+ G      L K+ +L MA +++ E+K  G+ PD 
Sbjct: 437 GKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDN 496

Query: 240 --FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA----- 292
             + ++ K  +  S+  E   +  E+ E R V  + L  NS++  L   G  ++A     
Sbjct: 497 ITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV-LAVNSLIDTLYKAGRGNEAWKIFH 555

Query: 293 -------------YNLLQAMIKGE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                        YN L A +  E  + +V   +  +   +  PN  +++ +++ L K+G
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +++ AL +   MT  GCM ++  YN  + GL   +RL E++ +  +M++    P + TL 
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLC 674

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++     +   +  AL+ +++  +Q G +        L++ + K     ++  F  ++  
Sbjct: 675 TILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIAL 734

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              L D    S  I  L   K+   A EL +   + G      +YN +I GL     +  
Sbjct: 735 SRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDV 794

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           AE LF+EM   G  P   TYNL+++   KS  I+  ML + + +  +      +TY T+I
Sbjct: 795 AEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIED-MLKVQKEMHCKGYESTYVTYNTII 853

Query: 578 -----------------------------------DGLCIAGRPDDAIMLWNEMEEKGCA 602
                                              DGL   G+ +DA  L++EM + GC 
Sbjct: 854 SGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCK 913

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS--ELNPPLAF 660
           PNR  +  L+ G             F+ M ++G+ PD+  +  LI A  +   LN  L++
Sbjct: 914 PNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY 973



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 266/615 (43%), Gaps = 38/615 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN YSY   +  L ++   +     L++M+D G   D  T T L+Q+ C++G+   A  V
Sbjct: 249 PNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDV 308

Query: 124 FNEIIDHGWVDEHVFSI-LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F ++       + V  I LL      G+     E+   M       N   +  ++    +
Sbjct: 309 FWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQ 368

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RVD+A  +FD+M + G       Y+ +I G  K  +L  AL+L++ M   G TP+   
Sbjct: 369 VGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYT 428

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
               I      GE    +K  E+ + + +    +  N+++  L  +G +  A  +   + 
Sbjct: 429 YVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL- 487

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                  +G          V P+  ++ ++I    K    D A+ +F EM +  C+ +V 
Sbjct: 488 -----KSIG----------VCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVL 532

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             N+LID L  + R  E++++  E++E    PT  T N++   L R   V   ++L+ +M
Sbjct: 533 AVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEM 592

Query: 421 RVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
               + P  + +NT+L   LCK+G+   A   L +M  +G +PD+  Y+ A+ GL+   +
Sbjct: 593 NSNSYPPNLITYNTVL-DCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLV---K 648

Query: 480 VDLALELFRDICAHG--CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVAT 536
            D   E FR  C       PD      I+    K   + EA     E I + G     ++
Sbjct: 649 EDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSS 708

Query: 537 YNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           ++ L+ G  K   +++++     + LSR+L       D    + LI  LC + +  +A  
Sbjct: 709 FHSLMEGILKRAGMEKSIEFAENIALSRILL------DDFFLSPLIRHLCKSKKALEAHE 762

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L  + E  G +    ++ ALI GL   +    A   F  MK  G  PD F +  ++ A  
Sbjct: 763 LVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMG 822

Query: 652 SELNPPLAFEVLKEM 666
             +      +V KEM
Sbjct: 823 KSMRIEDMLKVQKEM 837



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 231/539 (42%), Gaps = 23/539 (4%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G V    ++ + M    ++ N  TF  +      +  +  A      M ++G   ++  Y
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS--DEGELTLLVKEIWED 266
           + +I  L K+     A+++Y  M   GI P     S L+ +    D   +  L++E+ ED
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREM-ED 244

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM----IKGEPIADVGVEMLMIFKGTVS- 321
             V          +R+L   G  ++AY +LQ M     K + + +  +  ++   G VS 
Sbjct: 245 HGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSD 304

Query: 322 --------------PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                         P+  ++  +++    +G     + ++  M   G   NV  Y  ++D
Sbjct: 305 AKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVD 364

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            LC   R++E+ ++  +M++ G +P  ++ NS+     +   +  AL L   M + G  P
Sbjct: 365 ALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTP 424

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                 L I    K G++++A +    M  +G +PD+V  +A +  L    R+ +A  +F
Sbjct: 425 NGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVF 484

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
            ++ + G CPD + Y ++I    KA    EA  +F+EMI    +P V   N LI+   K+
Sbjct: 485 HELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKA 544

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G  ++A      + E     P   TY TL+ GL   G+  + + L  EM      PN IT
Sbjct: 545 GRGNEAWKIFHELKEMNL-DPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLIT 603

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  ++  LCK      AL     M  KG  PD+  +   +   + E     AF +  +M
Sbjct: 604 YNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM 662



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 203/447 (45%), Gaps = 27/447 (6%)

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID---QAYNLLQA 298
           ++  L ++ +D  E   L K + +   +   T  CN ++ ++ ++G +    Q ++L+Q 
Sbjct: 81  VVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQR 140

Query: 299 MIKGEPIADVG-------------------VEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            I     A+VG                   V + M+ +  +  N+ +++ +I  L+K G 
Sbjct: 141 QIVK---ANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGY 197

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A+ +++ M   G + +V  Y+ L+      + +E    LLREME+ G KP  ++   
Sbjct: 198 DREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTI 256

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
             R L +      A  +++KM  +G +P V  NT+LI+ LC  G+  +A      M    
Sbjct: 257 CIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASD 316

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD V Y   +    D       +E++  + A G   +VVAY  ++  LC+  RV EA 
Sbjct: 317 QKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEAS 376

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           D+F++M  KG+ P   +YN LI+G+ K+  ++ A+   + M      +P+  TY   I+ 
Sbjct: 377 DVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHM-NIHGPTPNGYTYVLFINY 435

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
              +G    AI  +  M+ KG  P+ +   A++  L K  R   A   F  +K  G+ PD
Sbjct: 436 YGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPD 495

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I       N   A +V  EM
Sbjct: 496 NITYTMMIKCCSKASNADEAMKVFSEM 522


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 275/602 (45%), Gaps = 60/602 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF +++  G+  PN  ++N L+   C+   +      L ++   G+  D  TL   ++ +
Sbjct: 92  LFQKMEYRGI-KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGF 150

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  GQ  +AL+  ++++  G+ +D+  +  L+    K GE   A EL+ R+D   ++L+ 
Sbjct: 151 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDV 210

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             +  +I    K   V+ A  L+ +M     +S+   Y  +I G C   +L+ A+ L+++
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    I PD    + L+ +   EG     VKE           ++   I   +V+  S+ 
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGR----VKEAKN----GLAMMMKQGIKPDIVTYNSLM 322

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
             Y L+  +   + I +      M  +G V+    S++I+IN   K   +D A+ LF+EM
Sbjct: 323 DGYCLVNEVNMAKSILNT-----MSHRG-VTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                  NV  YN+LIDGLC S R+  + EL+  M + G +P   T +S+   LC+   V
Sbjct: 377 HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV 436

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ L+ K++ QG  P +   T+LI  LCK G+  +A     D++ +G+   +  Y+  
Sbjct: 437 DKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVM 496

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G       D AL L   +  + C PD + Y III  L       +AE L  EMIT+GL
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556

Query: 531 IPSVATY------------------NLLINGWCKSGNIDQAML------CL---SRMLEK 563
           + S   Y                  +L      +SGN  + +L      C+   S M +K
Sbjct: 557 LYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDK 616

Query: 564 ESGSPDVI-----------------TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +   P VI                 TYT +I G C  G  D+++ L ++ME  GC P+ +
Sbjct: 617 DVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAV 676

Query: 607 TF 608
           T+
Sbjct: 677 TY 678



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 227/494 (45%), Gaps = 29/494 (5%)

Query: 170 EKTFCVLIHGFVKKSR------VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           E T    IH F   +       V  A+ LF+ + +         +  I+G L K+K    
Sbjct: 29  ENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHT 88

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSI 279
            L L+ +M+  GI P+F   + LI      G      ++L K +    + +T+TL  N+ 
Sbjct: 89  VLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITL--NTF 146

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++     G I QA N    ++       +G  +  +  GT          +IN L K G+
Sbjct: 147 IKGFCLKGQIHQALNFHDKLVA------LGFHLDQVSYGT----------LINGLCKVGE 190

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              AL L R +       +V +Y+ +ID +C    + ++++L  EM          T ++
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    +  A+ L  KM  +   P V    +L+   CK G+  EA   L  M+++G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PDIV Y++ + G   +  V++A  +   +   G    V +YNI+I+G CK + V +A 
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF EM  K + P+V TYN LI+G CKSG I  A L L  ++      PD+ITY++++D 
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA-LELIDLMHDRGQQPDIITYSSILDA 429

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC     D AI L  +++++G  PN  T+  LI GLCK  R   A   F  +  KG    
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489

Query: 640 MFVFVALISAFLSE 653
           +  +  +I  F S 
Sbjct: 490 VNTYTVMIQGFCSH 503



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 243/548 (44%), Gaps = 54/548 (9%)

Query: 114 SGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           S  +   LS+F ++   G     V F+IL+  F + G +  A  ++ ++       +  T
Sbjct: 83  SKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTIT 142

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
               I GF  K ++ +AL   DK+   GF  D   Y  +I GLCK  +   AL+L   + 
Sbjct: 143 LNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVD 202

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G  +  D  + S +I S             + +D++VN                     A
Sbjct: 203 GKLVQLDVVMYSTIIDS-------------MCKDKNVN--------------------DA 229

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           ++L   M+                   +S N  ++  +I+     GKL  A+ LF +MT 
Sbjct: 230 FDLYSEMVSRR----------------ISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                +V+ +N L+D  C   R++E+   L  M + G KP   T NS+    C   +V  
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A +++  M  +G    V+   ++I   CK     +A +   +M  +   P+++ Y++ I 
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL    R+  ALEL   +   G  PD++ Y+ I+  LCK   V +A  L  ++  +G+ P
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           ++ TY +LI+G CK G ++ A      +L K   +  V TYT +I G C  G  D+A+ L
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSL 512

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            ++M++  C P+ IT+  +I  L   D    A    R M  +G+   ++ F+   S  LS
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL---LYSFLEYGSWSLS 569

Query: 653 ELNPPLAF 660
            +  P  F
Sbjct: 570 FMAAPAHF 577



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 5/298 (1%)

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           N+N + ++  L   +      P       +   L + +     L+L +KM  +G +P   
Sbjct: 47  NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFV 106

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           +  +LI   C+ G    AF  L  +++ G+ PD +  +  I G     ++  AL     +
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G   D V+Y  +I+GLCK      A +L   +  K +   V  Y+ +I+  CK  N+
Sbjct: 167 VALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV 226

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           + A    S M+ +   S +++TY+ LI G CI G+  DAI L+N+M  +   P+  TF  
Sbjct: 227 NDAFDLYSEMVSRRISS-NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLAFEVLKEM 666
           L+   CK  R + A     MM ++G+KPD+  + +L+  +  ++E+N  +A  +L  M
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN--MAKSILNTM 341



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 206/500 (41%), Gaps = 70/500 (14%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R ++ ++V     +S    GF I     VG +++A  LF+++  E +  P+ Y++N L++
Sbjct: 239 RRISSNIVTYSALIS----GFCI-----VGKLKDAIGLFNKMTSENIN-PDVYTFNILVD 288

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
           A CK   V   +  L  M   G   D  T   L+  YC   + + A S+ N +   G   
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348

Query: 135 E-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
               ++I++  F K   VD+A +L + M    I  N  T+  LI G  K  R+  AL+L 
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELI 408

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           D M   G   D   Y  I+  LCKN  ++ A+ L  ++K  GI P+    + LI      
Sbjct: 409 DLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKG 468

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           G L    + I+ED  V    L  N+   +++   S+G  D+A +LL  M     I     
Sbjct: 469 GRLED-ARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI----- 522

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  +++III +L    + D A  L REM   G + +   Y +      
Sbjct: 523 -----------PDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW----- 566

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-------RVQ 423
                  S   +         P HF  N   +C   ++    A  L+ ++       +  
Sbjct: 567 -------SLSFMAA-------PAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSN 612

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             +  V+  +++I   C             D  ++G++ D+  Y+  I G       D +
Sbjct: 613 MRDKDVECPSVIIYSTC-------------DWSKQGYILDVNTYTVMIQGFCSHGLFDES 659

Query: 484 LELFRDICAHGCCPDVVAYN 503
           L L   +  +GC PD V Y+
Sbjct: 660 LALLSKMEVNGCIPDAVTYD 679


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 166/648 (25%), Positives = 287/648 (44%), Gaps = 63/648 (9%)

Query: 25  RCFMSPGALGFL----IRCLGSVGLVEEANMLFDQVKREGL--CVPNNYSYNCLLEALCK 78
           R  +SP  +  L    IR     G + +A    D  +R  L  C P   +YN +++AL  
Sbjct: 42  RSRLSPATIHPLYVASIRAYARAGRLRDA---VDAFERMDLFACPPAAPAYNAIMDALVD 98

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
           +   D        M   G   D +T T  L+ +C + +   AL +   +   G V    +
Sbjct: 99  AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AY 155

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
             ++      G    A +L ++M   ++  N   F  ++H   K+  V +A  L  K+ +
Sbjct: 156 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 215

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G + +   Y++ I GLC+  +L  A++L   M+   + PD                   
Sbjct: 216 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD------------------- 255

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                          +  N+++R L       +A + L+ M+                +G
Sbjct: 256 --------------VVTYNTLIRGLCKKSMPQEAMHYLRRMMN---------------QG 286

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P+  +++ II+   K   +  A  L ++    G + +   Y +LI+GLC    +E +
Sbjct: 287 CL-PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL  E +  G KP     NS+ + LC +  ++ AL ++ +M  +G  P ++   ++I  
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK G   +A   + D + +G+LPD+  ++  I G     ++D AL+L   +  +G  PD
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + YN +++GLCKA +V E  + F EMI KG  P+  TYN+LI  +C+S  +++A   + 
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M  +E   PD +++ TLI G C  G  + A +L+ ++EEKG +    TF  LI      
Sbjct: 526 KM-SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                A   F  M  KG + D + +  LI       N   A+  L EM
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM 632



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 255/581 (43%), Gaps = 53/581 (9%)

Query: 25  RCFMSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R     GA+ +     G  + G   +A  LFDQ+    +  PN  ++N +L ALCK   V
Sbjct: 145 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV-FPNLAAFNKVLHALCKRGDV 203

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILL 142
               + L ++   G   + +T    ++  C +G+  +A+ + + +  +   D   ++ L+
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 263

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               K     +A   + RM +     ++ T+  +I G+ K S V +A +L       GF 
Sbjct: 264 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 323

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            D   Y  +I GLC    +E AL+L++E +  GI PD                       
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI---------------------- 361

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                      ++ NS+++ L   G I  A  ++  M      A+ G            P
Sbjct: 362 -----------VVYNSLVKGLCLQGLILHALQVMNEM------AEEGCH----------P 394

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++I+IN L K G +  A  +  +    G + +VF +N LIDG C   +L+ + +L+
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M E G  P   T NS+   LC+   V       ++M ++G  P      +LI+  C+ 
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  EA + +  M QEG  PD V ++  I G      ++ A  LF+ +   G       +
Sbjct: 515 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 574

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I        +  AE +F+EM++KG      TY +LI+G CK+ N+D+A + L  M+ 
Sbjct: 575 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI- 633

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           K+   P + T+  +I+ L +  R   A+ + + M + G  P
Sbjct: 634 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 8/248 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A ++  +    Q+++   C  +P     LI        +EEA+ +  ++ +EGL  P
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH-P 534

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  S+N L+   C++  ++   +  +++++ G+     T   L+  +        A  +F
Sbjct: 535 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 594

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E++  G   D + + +L+    K   VD+A   +  M       +  TF  +I+     
Sbjct: 595 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 654

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFE 241
            RV +A+ +   M K G   +    D I+      K++     L  ++  KG    P +E
Sbjct: 655 HRVFQAVGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKGHISYPTYE 710

Query: 242 ILSKLITS 249
           +L + + S
Sbjct: 711 VLHEGVQS 718


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 150/567 (26%), Positives = 274/567 (48%), Gaps = 34/567 (5%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           TL+ +++ Y NSG FD    + + I +++  + E  F ++  A+ K    DKA +L  RM
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG----FASDAAMYDVIIGGLC 216
            D+   + + K+F  +++  + +    + L+ +D +  S      + +   ++++I  LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMT 273
           K + ++ A++++  M      PD      L+   C +E   E  LL+ E+ +    +   
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSPSP 257

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N ++  L   G + +   L+  M                 KG V PN  +++ +I+ 
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMF---------------LKGCV-PNEVTYNTLIHG 301

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLD A+SL   M    C+ N   Y  LI+GL    R  ++  LL  MEE G+   
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               + +   L +      A++L RKM  +G +P +   ++L+  LC+ GK  EA   L 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+  G LP+   YS+ + G       + A+++++++   GC  +   Y+++I GLC   
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML--EKESGSPDVI 571
           RV EA  ++++M+T G+ P    Y+ +I G C  G++D A+     ML  E+    PDV+
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK----CDRPRAALVH 627
           TY  L+DGLC+      A+ L N M ++GC P+ IT    +  L +    CD+ R+ L  
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601

Query: 628 F--RMMKEKGMKPDMFVFVALISAFLS 652
              R++K + +     +   ++  +L+
Sbjct: 602 LVVRLLKRQRVSGACTIVEVMLGKYLA 628



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 5/350 (1%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            +SPN  SF+++I  L K   +D A+ +FR M +  C+ + + Y  L+DGLC   R++E+
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIK 437
             LL EM+  G  P+    N +   LC++ D+     LV  M ++G  P  V +NT LI 
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT-LIH 300

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC  GK  +A   L  MV    +P+ V Y   I GL+  +R   A+ L   +   G   
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +   Y+++ISGL K  +  EA  L+ +M  KG  P++  Y++L++G C+ G  ++A   L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420

Query: 558 SRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           +RM+   SG  P+  TY++L+ G    G  ++A+ +W EM++ GC+ N+  +  LI GLC
Sbjct: 421 NRMI--ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R + A++ +  M   G+KPD   + ++I       +   A ++  EM
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 236/520 (45%), Gaps = 31/520 (5%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           +   S ++ +++  G+ D   +L+ R+   N  + E++F V+   + K    DKA+ LF 
Sbjct: 77  DSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136

Query: 195 KMT-----KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           +M      K    S  ++ +VII     ++ LE                D+ + S +  +
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY--------------DYVVNSNMNMN 182

Query: 250 CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPI 305
            S  G    L++K + + R V+        + R +     +   Y    L+  + K E I
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAI----EVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            +  + +  +     SP+   ++++I+ L K G L     L   M   GC+ N   YN L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I GLC   +L+++  LL  M  S   P   T  ++   L +++    A+ L+  M  +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
                  ++LI  L K GKA EA      M ++G  P+IV YS  + GL    + + A E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +   + A GC P+   Y+ ++ G  K     EA  ++ EM   G   +   Y++LI+G C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM---EEKGCA 602
             G + +AM+  S+ML      PD + Y+++I GLC  G  D A+ L++EM   EE    
Sbjct: 479 GVGRVKEAMMVWSKMLTI-GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           P+ +T+  L+ GLC       A+     M ++G  PD+  
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 226/551 (41%), Gaps = 106/551 (19%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  L F  +I+ L  +  V+ A  +F  +  E  C+P+ Y+Y  L++ LCK   +D  
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
            + L EMQ  G          L+   C  G   +   + + +   G V +E  ++ L+  
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G++DKA  L+ERM       N+ T+  LI+G VK+ R   A++L   M + G+  +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
             +Y V+I GL K  + E A+ L+ +M   G  P+  + S L+                 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG--------------- 406

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                             L   G  ++A  +L  MI    +                PN 
Sbjct: 407 ------------------LCREGKPNEAKEILNRMIASGCL----------------PNA 432

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  ++    K G  + A+ +++EM + GC +N F Y+ LIDGLC   R++E+  +  +
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G KP     +S+ + LC    +  AL L  +M  Q  EP  +              
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ-EEPKSQ-------------- 537

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
                            PD+V Y+  + GL   K +  A++L   +   GC PDV+  N 
Sbjct: 538 -----------------PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580

Query: 505 IISGLC---------------------KAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            ++ L                      K QRV+ A  +   M+ K L P  +T+ +++  
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVRE 640

Query: 544 WCKSGNIDQAM 554
            CK   I+ A+
Sbjct: 641 ICKPKKINAAI 651


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 207/405 (51%), Gaps = 12/405 (2%)

Query: 266 DRDVNTMTLLCNS-IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM--IFKGTVSP 322
           D+ VNT+ L  +S  M  ++S  S+      L A+++      +  E +   + +  VSP
Sbjct: 159 DQAVNTINLAKSSGFMPGVLSYNSV------LDAIVRSRGSVKLSAEEVYREMIRSRVSP 212

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  +++I+I      G+L   L  F EM + GC+ NV  YN LID  C   R++E++ LL
Sbjct: 213 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 272

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCK 441
           + M   G +P   + N +   LCR   +  A  ++ +M  +G  P  V +NTLL    CK
Sbjct: 273 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL-NGYCK 331

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G   +A     +MV+ G  P +V Y+A I  +   + ++ A+E F  +   G  P+   
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  +I G  +   + EA  + NEM   G  PSV TYN  I+G C    +++A+  +  M+
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           EK   +PDV++Y+T+I G C  G  D A  +  EM EKG +P+ +T+ +LI GLC+  R 
Sbjct: 452 EK-GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A    + M + G+ PD F +  LI+A+  E +   A  +  EM
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 555



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 233/533 (43%), Gaps = 65/533 (12%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++IL+  F   GE+ K       M+      N  T+  LI  + K  R+D+A  L   
Sbjct: 215 YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 274

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M+  G   +   Y+VII GLC+   ++ A ++  EM   G TPD    + L+     EG 
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG- 333

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                                                 N  QA++       +  EM+  
Sbjct: 334 --------------------------------------NFHQALV-------IHAEMV-- 346

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +  VSP+  ++  +IN++ K   L+ A+  F +M   G   N   Y  LIDG      L
Sbjct: 347 -RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+Y +L EM ESGF P+  T N+     C  + +  AL +V++M  +G  P V   + +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   C+ G+   AF+   +MV++G  PD V YS+ I GL +++R+  A +L +++   G 
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD   Y  +I+  C    + +A  L +EMI KG +P   TY++LING  K     +A  
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585

Query: 556 CLSRMLEKESGSPDVITYTTLID---------------GLCIAGRPDDAIMLWNEMEEKG 600
            L +++ +ES  P  +TY TLI+               G C+ G   +A  ++  M E+ 
Sbjct: 586 LLFKLIYEES-VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             P    +  +I G C+      A   ++ M   G  P     + LI A   E
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 697



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/582 (25%), Positives = 250/582 (42%), Gaps = 102/582 (17%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK--ALQLFD 194
           VF +++ ++S    +D+A   I             ++  ++   V+     K  A +++ 
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M +S  + +   Y+++I G C   +L+  L  + EM+ +G  P+               
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPN--------------- 248

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                              +  N+++      G ID+A+ LL++M               
Sbjct: 249 ------------------VVTYNTLIDAYCKMGRIDEAFGLLKSMSS------------- 277

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             KG + PN  S+++IIN L ++G +  A  +  EM   G   +   YN L++G C    
Sbjct: 278 --KG-MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
             ++  +  EM  +G  P+  T  ++   +C+ +++  A+    +MR++G  P  +  T 
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI    + G   EA+R L +M + GF P +V Y+A I G   ++R++ AL + +++   G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVV+Y+ IISG C+   +  A  +  EM+ KG+ P   TY+ LI G C+   + +A 
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                ML+     PD  TYTTLI+  C+ G  + A+ L +EM  KG  P+ +T+  LI G
Sbjct: 515 DLSQEMLDM-GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573

Query: 615 LCKCDRPRAA---------------------------------------------LVH-- 627
           L K  R R A                                             L+H  
Sbjct: 574 LNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEA 633

Query: 628 ---FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              F  M E+  KP   V+  +I       N P AF + KEM
Sbjct: 634 DRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 262/581 (45%), Gaps = 48/581 (8%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDL-VE 86
           S      +++    + ++++A    +  K  G  +P   SYN +L+A+ +S  SV L  E
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGF-MPGVLSYNSVLDAIVRSRGSVKLSAE 199

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
              +EM       + YT   L++ +C+ G+  K L  F E+  +G +   V ++ L+ A+
Sbjct: 200 EVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAY 259

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G +D+A  L++ M    ++ N  ++ V+I+G  ++  + +A ++ ++M   GF  D 
Sbjct: 260 CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y+ ++ G CK      AL +++EM  +G++P     + LI S      L   ++   +
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379

Query: 266 DR------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
            R      +  T T L +   R     G +++AY +L  M                 +  
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSR----QGLLNEAYRILNEMT----------------ESG 419

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            SP+  +++  I+      +++ AL + +EM + G   +V  Y+ +I G C    L+ ++
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++ +EM E G  P   T +S+ + LC  + +  A +L ++M   G  P     T LI   
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G   +A     +M+ +GFLPD V YS  I GL    R   A  L   +      P  
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599

Query: 500 VAYNI---------------IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           V Y+                +I G C    + EA+ +F  M+ +   P  A YN++I+G 
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659

Query: 545 CKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAG 584
           C+ GN+ +A      M+   SG  P  +T  TLI  L   G
Sbjct: 660 CRGGNLPKAFNLYKEMI--HSGFVPHTVTVITLIKALFKEG 698



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 172/348 (49%), Gaps = 5/348 (1%)

Query: 323 NTSS--FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE--S 378
           N+SS  FD+++ +      +D A++        G M  V  YN+++D +  S    +  +
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            E+ REM  S   P  +T N + R  C   ++   L    +M   G  P V     LI  
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK G+  EAF  L  M  +G  P+++ Y+  I GL     +  A E+  ++   G  PD
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN +++G CK     +A  +  EM+  G+ PSV TY  LIN  CK+ N+++AM    
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M       P+  TYTTLIDG    G  ++A  + NEM E G +P+ +T+ A I G C  
Sbjct: 379 QM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +R   AL   + M EKG+ PD+  +  +IS F  +     AF++ +EM
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 230/541 (42%), Gaps = 66/541 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +G ++EA  L   +  +G+  PN  SYN ++  LC+  S+      L+EM   
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGM-QPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+  D+ T   LL  YC  G F +AL +  E++ +G     V ++ L+ +  K   +++A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E  ++M    +R NE+T+  LI GF ++  +++A ++ ++MT+SGF+     Y+  I G
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C  +++E AL +  EM   G+ PD    S +I+    +GEL                  
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL------------------ 475

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                          D+A+ + Q M++               KG VSP+  ++  +I  L
Sbjct: 476 ---------------DRAFQMKQEMVE---------------KG-VSPDAVTYSSLIQGL 504

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            +  +L  A  L +EM  +G   + F Y  LI+  C    L ++  L  EM   GF P  
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTL--------------LIKEL 439
            T + +   L ++     A  L+ K+  +   P  V ++TL              LIK  
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 624

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G   EA R    MV+    P    Y+  I G      +  A  L++++   G  P  
Sbjct: 625 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 684

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V    +I  L K     E  ++  + +    +       +L+    K GN++  +  L+ 
Sbjct: 685 VTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTD 744

Query: 560 M 560
           M
Sbjct: 745 M 745



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 34/314 (10%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           LA DVV     +S    GF  +     G ++ A  +  ++  +G+  P+  +Y+ L++ L
Sbjct: 455 LAPDVVSYSTIIS----GFCRK-----GELDRAFQMKQEMVEKGVS-PDAVTYSSLIQGL 504

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           C+   +       +EM D G   D++T T L+  YC  G  +KAL + +E+I  G++ + 
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564

Query: 137 V-FSILLVAFSKWGEVDKACELIERM----------------DDC-NIRLNEKTFCVLIH 178
           V +S+L+   +K     +A  L+ ++                ++C NI    K+   LI 
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF--KSVVALIK 622

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF  K  + +A ++F+ M +       A+Y+VII G C+   L  A  LY EM  SG  P
Sbjct: 623 GFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 682

Query: 239 DFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               +  LI +   EG   E++ ++ +      +N    L   ++ I    G+++   N+
Sbjct: 683 HTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAE-LAKVLVEINHKEGNMEAVLNV 741

Query: 296 LQAMIKGEPIADVG 309
           L  M K   + + G
Sbjct: 742 LTDMAKDGLLPNSG 755


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 162/613 (26%), Positives = 276/613 (45%), Gaps = 44/613 (7%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           +R  G  G V+EA  +F+++     C P+ +SYN ++  L +    +        M+  G
Sbjct: 83  MRNYGRKGKVQEAVDVFERMDFYN-CEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
              D  T T  ++ +C + +   AL + N +   G  ++  V+  ++  F +     +A 
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           EL  +M    I  +  TF  L+H   KK  + +  +L +K+ K+G   +   +++ I GL
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C+   LE A         S +      L K++    +  + T                  
Sbjct: 262 CRKGVLEGA--------NSKVVEAENYLHKMVNKGLEPDDFTY----------------- 296

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            N+I+      G I  A  +L+                  FKG V P+  ++  +I  + 
Sbjct: 297 -NTIIYGYSKVGKIQDASRILKDAK---------------FKGFV-PDEFTYCSLIIGVC 339

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +DG +D AL+LF E    G   ++ LYN LI GL     + ++ +L+ +M + G  P  +
Sbjct: 340 QDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +   LC+   V  A NL+     +G+ P +     LI   CK  K   A   L  M
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
              G  PD++ Y++ + GL    + +  +E F+ I   GC P+++ YNI+I  LCKA++V
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA DL  E+  +GLIP   ++  +I+G+C +G++D+A     RM ++      V TY  
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNI 579

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +I+        D A  L++EM +KGC P+  T+  +I G CK     +         E G
Sbjct: 580 MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639

Query: 636 MKPDMFVFVALIS 648
             P +  F  +I+
Sbjct: 640 FVPSLTTFGRVIN 652



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 267/581 (45%), Gaps = 61/581 (10%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVD 152
           G+ +   T   +++     G+FD    V  E+   +D+  + E V+   +  + + G+V 
Sbjct: 35  GFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLL-EGVYVSAMRNYGRKGKVQ 93

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++ ERMD  N   +  ++  +++  V+    ++A +++ +M   G A D   + + I
Sbjct: 94  EAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRI 153

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
              C+ K+   AL+L + M   G                   EL  +V            
Sbjct: 154 KSFCRTKRPLAALRLLNNMPSQGC------------------ELNAVV------------ 183

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
              C  I      N  + +AY L   M++           L IF     P+ ++F+ +++
Sbjct: 184 --YCTVISGFYEENYQV-EAYELFNKMLR-----------LGIF-----PHIATFNKLMH 224

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE-------ESYELLREM 385
            L K G L     L  ++ + G   N+F +N  I GLC    LE       E+   L +M
Sbjct: 225 ILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKM 284

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G +P  FT N++     +   +  A  +++  + +G  P       LI  +C+ G  
Sbjct: 285 VNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI 344

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A     + + +G  P IV Y+  I GL     V  AL+L  D+   G  PD+  YN++
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLV 404

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+GLCK   V++A +L N  I KG +P + T+N LI+G+CK   +D A+  L  M     
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS-HG 463

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            +PDVITY ++++GLC A +P+D +  +  + EKGC PN IT+  LI  LCK  +   AL
Sbjct: 464 VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEAL 523

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                ++ +G+ PD   F  +IS F +  +   A+++ + M
Sbjct: 524 DLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 160/616 (25%), Positives = 288/616 (46%), Gaps = 39/616 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL---- 107
           +F+ VK+E        +Y  ++E L      D +E  L EM+      D   L  +    
Sbjct: 26  IFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR---LNVDNSLLEGVYVSA 82

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCN 165
           ++ Y   G+  +A+ VF E +D    +  +FS   ++    ++G  ++A ++  RM    
Sbjct: 83  MRNYGRKGKVQEAVDVF-ERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEG 141

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK-NKQLEMA 224
           I  +  TF + I  F +  R   AL+L + M   G   +A +Y  +I G  + N Q+E A
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE-A 200

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED---RDVNTMTLLCNS 278
            +L+++M   GI P     +KL+     +G L     L+ ++ ++    ++ T  +    
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 279 IMRILV---SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           + R  V   +N  + +A N L  M+                KG + P+  +++ II    
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVN---------------KG-LEPDDFTYNTIIYGYS 304

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K GK+  A  + ++    G + + F Y +LI G+C    ++ +  L  E    G KP+  
Sbjct: 305 KVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIV 364

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             N++ + L ++  V+ AL L+  M  +G  P +    L+I  LCK G   +A   L   
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAA 424

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           + +G+LPDI  ++  I G     ++D A+ +   + +HG  PDV+ YN I++GLCKA + 
Sbjct: 425 IAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKP 484

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +  + F  ++ KG +P++ TYN+LI   CK+  + +A+  L   +      PD +++ T
Sbjct: 485 EDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE-IRNRGLIPDPVSFGT 543

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI-TFMALITGLCKCDRPRAALVHFRMMKEK 634
           +I G C  G  D+A  L+  ME++    + + T+  +I    +      A   F  M +K
Sbjct: 544 VISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK 603

Query: 635 GMKPDMFVFVALISAF 650
           G  PD + +  +I  F
Sbjct: 604 GCDPDSYTYRVMIDGF 619



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 237/534 (44%), Gaps = 59/534 (11%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  LF+++ R G+  P+  ++N L+  LCK   +   E  L ++   G   + +T    
Sbjct: 199 EAYELFNKMLRLGI-FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 108 LQVYCNSGQFDKALS-------VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
           +Q  C  G  + A S         +++++ G   D+  ++ ++  +SK G++  A  +++
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                    +E T+C LI G  +   +D AL LF++    G      +Y+ +I GL +  
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            +  ALQL ++M   G++PD                       IW      T  L+ N +
Sbjct: 378 LVLKALQLMNDMSKEGMSPD-----------------------IW------TYNLVINGL 408

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            ++    G +  A NLL A I                KG + P+  +F+ +I+   K  K
Sbjct: 409 CKM----GCVSDANNLLNAAIA---------------KGYL-PDIFTFNTLIDGYCKRLK 448

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A+ +   M   G   +V  YN++++GLC + + E+  E  + + E G  P   T N 
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNI 508

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+ + V  AL+L+ ++R +G  P       +I   C +G   EA++    M Q+ 
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568

Query: 460 FL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
            +   +  Y+  I    +   +D+A +LF ++   GC PD   Y ++I G CK   V   
Sbjct: 569 RICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG 628

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            D   + I  G +PS+ T+  +IN  C    + +A+  +  M+        V+T
Sbjct: 629 YDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVT 682



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 239/548 (43%), Gaps = 45/548 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G ++E   L ++V + G+C PN +++N  ++ LC+   ++    ++ E ++Y
Sbjct: 222 LMHILCKKGHLQEGEKLLNKVLKNGVC-PNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280

Query: 96  -------GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
                  G   D +T   ++  Y   G+   A  +  +    G+V DE  +  L++   +
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQ 340

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++D A  L E      ++ +   +  LI G  ++  V KALQL + M+K G + D   
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+++I GLCK   +  A  L +     G  PD    + LI             K +  D 
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG---------YCKRLKMDN 451

Query: 268 DVNTM-TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            +  + ++  + +   +++  SI      L  + K     DV     MI +    PN  +
Sbjct: 452 AIGILDSMWSHGVTPDVITYNSI------LNGLCKAAKPEDVMETFKMIMEKGCLPNIIT 505

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++I+I +L K  K+  AL L  E+   G + +   +  +I G CN+  L+E+Y+L R ME
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565

Query: 387 ESGFKPTHF--TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +  ++  H   T N M      + D+  A  L  +M  +G +P      ++I   CK G 
Sbjct: 566 QQ-YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
               + FL   ++ GF+P +  +   I  L    RV  A+ +   +   G  P+ V    
Sbjct: 625 VNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV--T 682

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           I     KA  VA  + +  +++ K  I   A Y LL +G              ++ L+K 
Sbjct: 683 IFDADKKA--VAAPKIIVEDLLKKSHITYYA-YELLYDG------------IRNKKLQKN 727

Query: 565 SGSPDVIT 572
             S +V+T
Sbjct: 728 KASKEVLT 735



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 147/317 (46%), Gaps = 16/317 (5%)

Query: 343 ALSLFREMTQIGCMQNVFL-YNNLIDGLCNSNRLEESYELLREM----EESGFKPTHFTL 397
           ALS+F  + +    ++ FL Y  +I+ L      +    +L EM    + S  +  +   
Sbjct: 23  ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYV-- 80

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            S  R   R+  V  A+++  +M     EP +     ++  L ++G   +A +    M  
Sbjct: 81  -SAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKH 139

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           EG  PD+  ++  I      KR   AL L  ++ + GC  + V Y  +ISG  +     E
Sbjct: 140 EGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE 199

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +LFN+M+  G+ P +AT+N L++  CK G++ +    L+++L K    P++ T+   I
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVL-KNGVCPNLFTFNIFI 258

Query: 578 DGLCIAG-------RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            GLC  G       +  +A    ++M  KG  P+  T+  +I G  K  + + A    + 
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318

Query: 631 MKEKGMKPDMFVFVALI 647
            K KG  PD F + +LI
Sbjct: 319 AKFKGFVPDEFTYCSLI 335



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 58/129 (44%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +AR++     L +++        P + G +I    + G ++EA  LF +++++     
Sbjct: 513 LCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICH 572

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN ++ A  +   +D+ +    EM D G   D YT   ++  +C  G  +      
Sbjct: 573 TVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFL 632

Query: 125 NEIIDHGWV 133
            + I+ G+V
Sbjct: 633 LKEIEIGFV 641


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 2/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+   + ++I  L K  KLDLA S F +M Q GC+ +   Y  L+  L  + + E+ +
Sbjct: 45  VKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 104

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++  EM   G  P   T  ++    C+   +  AL+L+R+++  G  P     + LI  L
Sbjct: 105 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 164

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CKH +  EA R L +M   G + D++ Y++ I GL    ++D A  +   +   GC PD 
Sbjct: 165 CKHDRHEEA-RELFEMAA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 222

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V+YN+II  LCK  RV+EA++L ++ + +  +P V    +L++G CKS  +++A + L R
Sbjct: 223 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 282

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           MLE    +P V+TY+ +IDGLC A R DDA ++  +M   GC P+ +T+ A+I   CK  
Sbjct: 283 MLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVG 342

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A   F+ M E+G   D+  +  LI  +        A  +++EM
Sbjct: 343 RLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 207/446 (46%), Gaps = 57/446 (12%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
           L EM+  G      T   L++  C     +KAL +F+++ID     D  ++++++    K
Sbjct: 2   LGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 61

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             ++D A    E+M       ++ T+ VL+H   K  + ++  Q+F++M   G + +   
Sbjct: 62  INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 121

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWE- 265
           Y  ++ G CK  +++ AL L   +KG+G +P   + S LI   C  +       +E++E 
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEE--ARELFEM 179

Query: 266 -DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              DV  + ++  S +  L   G +D+A                 V + MI  G  +P+ 
Sbjct: 180 AAGDVQDV-IVYTSFISGLCKAGKLDEAK---------------AVHVKMIEAGC-APDP 222

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+++II +L KD ++  A  L  +  +  CM  V +   L+DGLC S R+EE+  +L  
Sbjct: 223 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 282

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M E+G +                                   P V   + +I  LCK  +
Sbjct: 283 MLEAGDRA----------------------------------PSVVTYSAVIDGLCKADR 308

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A+  L  M + G +PD+V Y+A I     + R+D A ELF+ +   GC  DVVAYNI
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNI 368

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGL 530
           +I G C+A +V EA  +  EM  +G+
Sbjct: 369 LIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 5/251 (1%)

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ +M+  G  P +     LI++LC+     +A +    M+     PD   Y+  IG L 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I ++DLA   F  +   GC PD V Y +++  L KA +  +   +F EM++KG  P + 
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY  ++NG+CK+G IDQA L L R L+    SP    Y+TLIDGLC   R ++A  L+ E
Sbjct: 121 TYATVVNGYCKAGRIDQA-LSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-E 178

Query: 596 MEEKGCAPNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           M   G   + I + + I+GLCK  +   A  VH +M+ E G  PD   +  +I +   + 
Sbjct: 179 M-AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI-EAGCAPDPVSYNVIIYSLCKDN 236

Query: 655 NPPLAFEVLKE 665
               A E++ +
Sbjct: 237 RVSEAKELMDQ 247



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 27/373 (7%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           VK   F+    +G L +    +  ++ A   F+Q+ + G C+P+  +Y  L+ +L K+C 
Sbjct: 45  VKPDAFLYTVVIGHLCK----INKLDLAASYFEQMVQSG-CLPDKVTYTVLVHSLFKACK 99

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSI 140
            +      +EM   G   +  T   ++  YC +G+ D+ALS+   +   G      ++S 
Sbjct: 100 WEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYST 159

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+    K    ++A EL E M   +++ +   +   I G  K  ++D+A  +  KM ++G
Sbjct: 160 LIDGLCKHDRHEEARELFE-MAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 217

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEG--ELT 257
            A D   Y+VII  LCK+ ++  A +L  +       P   + + L+   C      E  
Sbjct: 218 CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEAC 277

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
           ++++ + E  D     +  ++++  L     +D AY +LQ M +                
Sbjct: 278 VILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRA--------------- 322

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G V P+  ++  II+   K G+LD A  LF+ M + GC  +V  YN LI G C + +++E
Sbjct: 323 GCV-PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDE 381

Query: 378 SYELLREMEESGF 390
           +  ++ EM   G 
Sbjct: 382 AIAMIEEMAGRGI 394



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 12/220 (5%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           QDV+    F+S          L   G ++EA  +  ++   G C P+  SYN ++ +LCK
Sbjct: 185 QDVIVYTSFISG---------LCKAGKLDEAKAVHVKMIEAG-CAPDPVSYNVIIYSLCK 234

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
              V   +  + +  +          T L+   C S + ++A  +   +++ G     V 
Sbjct: 235 DNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVV 294

Query: 138 -FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S ++    K   +D A  ++++M       +  T+  +I  F K  R+D+A +LF +M
Sbjct: 295 TYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM 354

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
            + G ASD   Y+++I G C+  +++ A+ +  EM G GI
Sbjct: 355 HERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +  R++  + L    ++ +C         L+  L     VEEA ++ +++   G   P
Sbjct: 232 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP 291

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +Y+ +++ LCK+  +D   + L++M+  G   D  T T ++  +C  G+ D+A  +F
Sbjct: 292 SVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 351

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
             + + G   + V ++IL+  + +  +VD+A  +IE M
Sbjct: 352 QRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 47/100 (47%)

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           +P ++T+ +LI  LC     + A+ ++++M +    P+   +  +I  LCK ++   A  
Sbjct: 11  TPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAAS 70

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +F  M + G  PD   +  L+ +           ++ +EM
Sbjct: 71  YFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 110


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 167/632 (26%), Positives = 292/632 (46%), Gaps = 55/632 (8%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L +A R+     L + + ++R      A   +I   GS G  +EA  L ++ K +G  +
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG-SI 122

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  +YNC+L  L K   V+      +EM+ D       Y +  L+ + C  G+ + AL 
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNI--LIDMLCREGKLNAALE 180

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +++   G + +    +I++    K  ++++AC + E MDD     N  TF  LI G  
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  RVD A  L++KM   G    A +Y  +I    K  + E   ++Y EM  +G +PD  
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           +++  +      GE                 T    ++ R + ++G I            
Sbjct: 301 LINTYMDCVFKAGE-----------------TEKGRALFREINAHGFI------------ 331

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               P+  S+ I+I+ L+K G  +    LF  M + GC+ +   
Sbjct: 332 --------------------PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHA 371

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +IDG C S ++ ++Y+LL EM+  G  PT  T  S+   L +   +  A  L  + +
Sbjct: 372 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 431

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G +  V   + LI    K G+  EA+  + +++Q+G  P++  ++  +  L+  + ++
Sbjct: 432 SNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN 491

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL  F+ +    C P+ + Y+I+I+GLC+ ++  +A   + EM   GL P+  TY  +I
Sbjct: 492 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMI 551

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G  K+GNI +A    SR  +   G PD  +Y  +I+GL  A +  DA  L+ E   KGC
Sbjct: 552 SGLAKAGNILEASGLFSR-FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGC 610

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +  T + L+  L K +    A +   ++KE
Sbjct: 611 NIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 642



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 269/559 (48%), Gaps = 21/559 (3%)

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           V C + + D+A+ +F ++  +  V   + ++ +++ +   G+ D+A  L+ER        
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +   +  ++    KK RV++AL++F++M +     +   Y+++I  LC+  +L  AL++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 229 SEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            +M+ +G+ P+   ++ +I     + + E    + E  +D+      +  +S++  L   
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +D AY+L + M+      D G            P    +  +I +  K G+ +    +
Sbjct: 243 GRVDDAYSLYEKML------DCGH----------VPGAIVYTSLIRSFFKCGRKEDGHKI 286

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           ++EM   GC  ++ L N  +D +  +   E+   L RE+   GF P   + + +   L +
Sbjct: 287 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 346

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                    L   M+ QG          +I   CK GK  +A++ L +M  +G  P +V 
Sbjct: 347 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y + I GL  I R+D A  LF +  ++G   +VV Y+ +I G  K  R+ EA  +  E++
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 466

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            KGL P+V T+N L++   K+  I++A++C   M + +   P+ ITY+ LI+GLC   + 
Sbjct: 467 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC-PPNQITYSILINGLCRVRKF 525

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           + A + W EM++ G  PN IT+  +I+GL K      A   F   K  G  PD   + A+
Sbjct: 526 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 585

Query: 647 ISAFLSELNPPLAFEVLKE 665
           I    S      A+ + +E
Sbjct: 586 IEGLSSANKAMDAYALFEE 604



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 235/506 (46%), Gaps = 33/506 (6%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG----------LCKNKQLEMAL 225
           L+   VK  ++ +A  +   M K  F    + Y ++IG           LCK  +L+ A+
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRIL 283
           +L+ +++ +   P     + +I      G+       +   +   ++   +  N I+  L
Sbjct: 76  ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                +++A  + + M                 K    PN  +++I+I+ L ++GKL+ A
Sbjct: 136 GKKRRVEEALRIFEEM-----------------KRDAVPNVPTYNILIDMLCREGKLNAA 178

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L +  +M + G   NV   N +ID LC + +LEE+  +   M++    P   T +S+   
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           L +   V  A +L  KM   GH P     T LI+   K G+  +  +   +MV  G  PD
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +   +  +  +      +    LFR+I AHG  PD  +Y+I+I GL KA    E  +LF 
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M  +G +     YN +I+G+CKSG +++A   L  M  K    P V+TY ++IDGL   
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK-GHPPTVVTYGSVIDGLAKI 417

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            R D+A ML+ E +  G   N + + +LI G  K  R   A +    + +KG+ P+++ +
Sbjct: 418 DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 477

Query: 644 VALISAFLS--ELNPPL-AFEVLKEM 666
             L+ A +   E+N  L  F+ +K++
Sbjct: 478 NCLLDALVKAEEINEALICFQSMKDL 503



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 130/292 (44%), Gaps = 47/292 (16%)

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG------ 473
           M + G  P    +  L+    K  K  EAF  +  M +  F P    Y+  IG       
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 474 ----LIDIKRVDLALELFRDI-------CAH----------------------------G 494
               L    R+D A+ELF  +       CA+                            G
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P V+AYN I++ L K +RV EA  +F EM  +  +P+V TYN+LI+  C+ G ++ A+
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAAL 179

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M E+    P+V+T   +ID LC A + ++A  ++  M++K C PN +TF +LI G
Sbjct: 180 EIRDDM-ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L KC R   A   +  M + G  P   V+ +LI +F          ++ KEM
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 166/648 (25%), Positives = 287/648 (44%), Gaps = 63/648 (9%)

Query: 25  RCFMSPGALGFL----IRCLGSVGLVEEANMLFDQVKREGL--CVPNNYSYNCLLEALCK 78
           R  +SP  +  L    IR     G + +A    D  +R  L  C P   +YN +++AL  
Sbjct: 41  RSRLSPATIHPLYVASIRAYARAGRLRDA---VDAFERMDLFACPPAAPAYNAIMDALVD 97

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
           +   D        M   G   D +T T  L+ +C + +   AL +   +   G V    +
Sbjct: 98  AAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV---AY 154

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
             ++      G    A +L ++M   ++  N   F  ++H   K+  V +A  L  K+ +
Sbjct: 155 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 214

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G + +   Y++ I GLC+  +L  A++L   M+   + PD                   
Sbjct: 215 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD------------------- 254

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                          +  N+++R L       +A + L+ M+                +G
Sbjct: 255 --------------VVTYNTLIRGLCKKSMPQEAMHYLRRMMN---------------QG 285

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P+  +++ II+   K   +  A  L ++    G + +   Y +LI+GLC    +E +
Sbjct: 286 CL-PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL  E +  G KP     NS+ + LC +  ++ AL ++ +M  +G  P ++   ++I  
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK G   +A   + D + +G+LPD+  ++  I G     ++D AL+L   +  +G  PD
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + YN +++GLCKA +V E  + F EMI KG  P+  TYN+LI  +C+S  +++A   + 
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M  +E   PD +++ TLI G C  G  + A +L+ ++EEKG +    TF  LI      
Sbjct: 525 KM-SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                A   F  M  KG + D + +  LI       N   A+  L EM
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM 631



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 257/581 (44%), Gaps = 53/581 (9%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R     GA+ +  ++  L + G   +A  LFDQ+    +  PN  ++N +L ALCK   V
Sbjct: 144 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHV-FPNLAAFNKVLHALCKRGDV 202

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILL 142
               + L ++   G   + +T    ++  C +G+  +A+ + + +  +   D   ++ L+
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLI 262

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
               K     +A   + RM +     ++ T+  +I G+ K S V +A +L       GF 
Sbjct: 263 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 322

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            D   Y  +I GLC    +E AL+L++E +  GI PD                       
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI---------------------- 360

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                      ++ NS+++ L   G I  A  ++  M      A+ G            P
Sbjct: 361 -----------VVYNSLVKGLCLQGLILHALQVMNEM------AEEGCH----------P 393

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +++I+IN L K G +  A  +  +    G + +VF +N LIDG C   +L+ + +L+
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M E G  P   T NS+   LC+   V       ++M ++G  P      +LI+  C+ 
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            K  EA + +  M QEG  PD V ++  I G      ++ A  LF+ +   G       +
Sbjct: 514 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 573

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I        +  AE +F+EM++KG      TY +LI+G CK+ N+D+A + L  M+ 
Sbjct: 574 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI- 632

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           K+   P + T+  +I+ L +  R   A+ + + M + G  P
Sbjct: 633 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 8/248 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A ++  +    Q+++   C  +P     LI        +EEA+ +  ++ +EGL  P
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH-P 533

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  S+N L+   C++  ++   +  +++++ G+     T   L+  +        A  +F
Sbjct: 534 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 593

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E++  G   D + + +L+    K   VD+A   +  M       +  TF  +I+     
Sbjct: 594 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 653

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFE 241
            RV +A+ +   M K G   +    D I+      K++     L  ++  KG    P +E
Sbjct: 654 HRVFQAVGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKGHISYPTYE 709

Query: 242 ILSKLITS 249
           +L + + S
Sbjct: 710 VLHEGVQS 717


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 190/354 (53%), Gaps = 5/354 (1%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + +  VSPN  +++I+I      G +D+AL+LF +M   GC+ NV  YN LIDG C   +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
           +++ ++LLR M   G +P   + N +   LCR   +     ++ +M  +G+    V +NT
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L IK  CK G   +A     +M++ G  P ++ Y++ I  +     ++ A+E    +   
Sbjct: 316 L-IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G CP+   Y  ++ G  +   + EA  +  EM   G  PSV TYN LING C +G ++ A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434

Query: 554 MLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           +  L  M  KE G SPDV++Y+T++ G C +   D+A+ +  EM EKG  P+ IT+ +LI
Sbjct: 435 IAVLEDM--KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G C+  R + A   +  M   G+ PD F + ALI+A+  E +   A ++  EM
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 258/566 (45%), Gaps = 36/566 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDC 164
           +++ Y      DKALS+ +    HG++       ++L         +  A  + + M + 
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  N  T+ +LI GF     +D AL LFDKM   G   +   Y+ +I G CK ++++  
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            +L   M   G+ P+    + +I     EG   E++ ++ E+   R  +   +  N++++
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSLDEVTYNTLIK 318

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G      N  QA++       +  EML   +  ++P+  ++  +I+++ K G ++
Sbjct: 319 GYCKEG------NFHQALV-------MHAEML---RHGLTPSVITYTSLIHSMCKAGNMN 362

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+    +M   G   N   Y  L+DG      + E+Y +LREM ++GF P+  T N++ 
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C    +  A+ ++  M+ +G  P V   + ++   C+     EA R   +MV++G  
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD + YS+ I G  + +R   A +L+ ++   G  PD   Y  +I+  C    + +A  L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT------- 574
            NEM+ KG++P V TY++LING  K     +A   L ++  +ES   DV  +T       
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602

Query: 575 -------TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
                  +LI G C+ G   +A  ++  M  K   P+   +  +I G C+    R A   
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
           ++ M + G        +AL+ A   E
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKE 688



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 220/456 (48%), Gaps = 22/456 (4%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-LEMALQLYSEM 231
           F +++  + + S +DKAL +       GF      Y+ ++    ++K+ +  A  ++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 232 KGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
             S ++P+    + LI      G  ++ L + +  E +      +  N+++        I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 290 DQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           D  + LL++M +KG                 + PN  S++++IN L ++G++     +  
Sbjct: 257 DDGFKLLRSMALKG-----------------LEPNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + G   +   YN LI G C      ++  +  EM   G  P+  T  S+   +C+  
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           ++  A+  + +MRV+G  P  +  T L+    + G   EA+R L +M   GF P +V Y+
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A I G     +++ A+ +  D+   G  PDVV+Y+ ++SG C++  V EA  +  EM+ K
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P   TY+ LI G+C+     +A      ML +    PD  TYT LI+  C+ G  + 
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           A+ L NEM EKG  P+ +T+  LI GL K  R R A
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 182/346 (52%), Gaps = 2/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   S++ +++  ++  + +  A ++F+EM +     NVF YN LI G C +  ++ +  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  +ME  G  P   T N++    C+ + +     L+R M ++G EP +    ++I  LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  E    LT+M + G+  D V Y+  I G         AL +  ++  HG  P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I  +CKA  +  A +  ++M  +GL P+  TY  L++G+ + G +++A   L R 
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL-RE 405

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +     SP V+TY  LI+G C+ G+ +DAI +  +M+EKG +P+ +++  +++G C+   
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL   R M EKG+KPD   + +LI  F  +     A ++ +EM
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 249/597 (41%), Gaps = 91/597 (15%)

Query: 21  VVKSRCFMSPGALGF------LIRCLGSVGLVEEA--NMLFDQVKREGLCVPNNYSYNCL 72
           + ++  FM PG L +       IR   ++   E     ML  QV       PN ++YN L
Sbjct: 159 LAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS------PNVFTYNIL 211

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           +   C + ++D+      +M+  G   +  T   L+  YC                    
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC-------------------- 251

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
                         K  ++D   +L+  M    +  N  ++ V+I+G  ++ R+ +   +
Sbjct: 252 --------------KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M + G++ D   Y+ +I G CK      AL +++EM   G+TP     + LI S   
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357

Query: 253 EGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
            G +   ++ + + R      +  T T L +   +     G +++AY +L+ M       
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ----KGYMNEAYRVLREM------N 407

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D G           SP+  +++ +IN     GK++ A+++  +M + G   +V  Y+ ++
Sbjct: 408 DNG----------FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G C S  ++E+  + REM E G KP   T +S+ +  C ++    A +L  +M   G  
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P     T LI   C  G   +A +   +MV++G LPD+V YS  I GL    R   A  L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 487 FRDICAHGCCPDVVAYNI---------------IISGLCKAQRVAEAEDLFNEMITKGLI 531
              +      P  V Y+                +I G C    + EA+ +F  M+ K   
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           P    YN++I+G C++G+I +A      M+ K       +T   L+  L   G+ ++
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMV-KSGFLLHTVTVIALVKALHKEGKVNE 693



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 2/173 (1%)

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG-NIDQA 553
           C      +++++    +   + +A  + +     G +P V +YN +++   +S  NI  A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 MLE +  SP+V TY  LI G C AG  D A+ L+++ME KGC PN +T+  LI 
Sbjct: 190 ENVFKEMLESQV-SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G CK  +        R M  KG++P++  +  +I+    E        VL EM
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 233/495 (47%), Gaps = 35/495 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF +L+H    K  +  AL     M   G + DA  Y+ ++   C+   L  A  L 
Sbjct: 207 NHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 266

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRI 282
           + MK  GI P     + L+++ +  G +    K +        + D+ T  +L       
Sbjct: 267 ARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMG---- 322

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +D+A+ L   M           E L    GT  P+  +++ +++   K      
Sbjct: 323 LCQAGKVDEAFRLKDEM-----------ERL----GTALPDVVTYNTLVDACFKWRCSSD 367

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL L  EM   G    +  +N ++  LC   +LEE+   L ++ E G  P   T N++  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQE 458
             C+  +V  A  L+ +M  +G    +K +T     ++  LCK  +  +A   L    Q 
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKG----LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+PD V Y   +         + AL L+  +      P +  YN +I GLC+ +R+ EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D  NE + KGL+P   TYN++I+ +CK G+++ A    ++M+E  S  PDV+T  TL++
Sbjct: 544 IDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN-SFKPDVVTCNTLMN 602

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC+ G+ D A+ L+    EKG   + IT+  LI  +CK      AL  F  M+ KG++P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 639 DMFVFVALISAFLSE 653
           D F +  ++SA LSE
Sbjct: 663 DAFTYNVVLSA-LSE 676



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/578 (24%), Positives = 261/578 (45%), Gaps = 25/578 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN+Y++N L+   C   ++      L  MQ +G   D  T   LL  +C  G   +A ++
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 124 FNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +   G    +  ++ L+ AF++ G + +A +++E M       + +T+ VL  G  +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQ 325

Query: 183 KSRVDKALQLFDKMTKSGFA-SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             +VD+A +L D+M + G A  D   Y+ ++    K +    AL+L  EM+  G+ P   
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + ++ S   EG+L   + ++ +  +  +    +  N+++      G++ +A+ L+  M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 300 I-KGEPIADVGVEMLMIF-------------------KGTVSPNTSSFDIIINTLLKDGK 339
           + KG  +    +  ++                     +G V P+  S+  ++    K+  
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV-PDEVSYGTVMAAYFKEYN 504

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            + AL L+ +M +   + ++  YN LI GLC   RL+E+ + L E  E G  P   T N 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+  D+  A     KM     +P V     L+  LC HGK  +A +     V++G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D++ Y+  I  +  +  VD AL  F D+   G  PD   YN+++S L +A R  EA 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++ +++   G +       LL        ++ +          +++    + TY   ++G
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           LC  G+  +A  + +EM +KG   +  T++ L+ GL K
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 160/657 (24%), Positives = 277/657 (42%), Gaps = 83/657 (12%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV----------DLVEMRLKEMQDYGWG 98
           A  L   ++R     P+  + N +L AL +S S            L+E+RL         
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHP------- 206

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL 157
            + YT   L+  +C+ G    AL+  + +   G   + V ++ LL A  + G + +A  L
Sbjct: 207 -NHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           + RM    I   + T+  L+  F +   + +A ++ + MT  GF  D   Y+V+  GLC+
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQ 325

Query: 218 NKQLEMALQLYSEMKGSGIT-PDFEILSKLITSC------SDEGELTLLVKEIWEDRDVN 270
             +++ A +L  EM+  G   PD    + L+ +C      SD     L + E   D+ V 
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSD----ALRLLEEMRDKGVK 381

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              +  N +++ L   G +++A   L      E IA+ G+          +P+  +++ +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKL------EKIAEEGL----------APDVITYNTL 425

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   K G +  A +L  EM   G   + F  N ++  LC   R E++ ELL    + GF
Sbjct: 426 IDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGF 485

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   +  ++     +  +   AL L  +M  +   P +     LIK LC+  +  EA  
Sbjct: 486 VPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAID 545

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L + V++G +PD   Y+  I        ++ A      +  +   PDVV  N +++GLC
Sbjct: 546 KLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLC 605

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
              ++ +A  LF   + KG    V TYN LI   CK G++D A+     M E +   PD 
Sbjct: 606 LHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM-EVKGLQPDA 664

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKG----------CAPNRI-------------- 606
            TY  ++  L  AGR ++A  + +++ + G            P+                
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724

Query: 607 ------------TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                       T+M  + GLC   + + A      M +KGM  D   ++ L+   +
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLI 781



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 35/369 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +F+++++T    G L  AL+    M   G   +   YN L++  C    L E+ 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  M+  G  PT  T N++     R   +  A  +V  M   G EP ++   +L   L
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323

Query: 440 CKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           C+ GK  EAFR   +M + G  LPD+V Y+  +      +    AL L  ++   G  P 
Sbjct: 324 CQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V +NI++  LCK  ++ EA     ++  +GL P V TYN LI+ +CK+GN+ +A   + 
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 559 RMLEK---------------------------------ESG-SPDVITYTTLIDGLCIAG 584
            M+ K                                 + G  PD ++Y T++       
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
            P+ A+ LW++M E+   P+  T+  LI GLC+ +R + A+       EKG+ PD   + 
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563

Query: 645 ALISAFLSE 653
            +I A+  E
Sbjct: 564 IIIHAYCKE 572



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 4/350 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKL--DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           V P+  + + +++ L +        +L +FR + ++    N + +N L+   C+   L +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +   L  M+  G  P   T N++    CR+  +  A  L+ +M+  G  P       L+ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC- 496
              + G   +A + +  M   GF PD+  Y+    GL    +VD A  L  ++   G   
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL 346

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDVV YN ++    K +  ++A  L  EM  KG+ P++ T+N+++   CK G +++A+  
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L ++ E E  +PDVITY TLID  C AG    A  L +EM  KG   +  T   ++  LC
Sbjct: 407 LEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  R   A        ++G  PD   +  +++A+  E NP  A  +  +M
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 175/414 (42%), Gaps = 58/414 (14%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++ L   G +EEA    +++  EGL  P+  +YN L++A CK+ +V      + EM  
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLA-PDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
            G   D +TL  +L   C   +++ A  + +     G+V DE  +  ++ A+ K    + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L ++M +  +  +  T+  LI G  +  R+ +A+   ++  + G   D   Y++II 
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIH 567

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNT 271
             CK   LE A + +++M  +   PD    + L+      G+L   +K  E W ++    
Sbjct: 568 AYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV 627

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             +  N++++ +   G +D A +    M +KG                 + P+  +++++
Sbjct: 628 DVITYNTLIQSMCKVGDVDTALHFFDDMEVKG-----------------LQPDAFTYNVV 670

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVF------------------------------ 360
           ++ L + G+ + A ++  ++   G +   F                              
Sbjct: 671 LSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKA 730

Query: 361 ------LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
                  Y   ++GLC   +L+E+  +L EM + G      T  ++   L +RQ
Sbjct: 731 QDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQ 784


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 236/501 (47%), Gaps = 20/501 (3%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  T+  L+     + R+  AL + D M + G A    MY V +   C+      A+ + 
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            ++ G G   D    + ++ +  D+G   E   L++++          +  N+++R L  
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                   +L++ M+                     PN  +F  +I  L ++G  +    
Sbjct: 230 ARRWGHVQDLMEEMVAA----------------GCPPNIVTFSTLIGHLCRNGLFERVHE 273

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  +M + GC  +V +Y  +IDG+C   RLE +  +L  M   G  P     N++ + LC
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                  A  L+ +M  +          +L+  LC++G        L  M++ G +PD++
Sbjct: 334 SADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVI 393

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I G      +D A+ L R + A GC P+ V+Y I++ GLC A+R  +AE+L ++M
Sbjct: 394 TYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           I +G  P+  T+N LIN  CK G ++QA+  L +ML     SPD+I+Y+T+IDGL  AG 
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC-SPDLISYSTVIDGLGKAGN 512

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A+ L N M +KG +PN I + ++ + L    R    +  F  +++  ++ D  ++ A
Sbjct: 513 TDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNA 572

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           +IS+         A E L  M
Sbjct: 573 VISSLCKRGETDRAIEFLAYM 593



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 257/546 (47%), Gaps = 31/546 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A  +  L+R L + G + +A  + D + R G C P    Y+  LEA C++      
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRG-CAPTPPMYHVTLEAACRASGFRGA 165

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS---IL- 141
              L+++   G   D      +LQ  C+ G  D+A+ +  +++     +  V S   +L 
Sbjct: 166 VGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLR 225

Query: 142 -LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
            L    +WG V    +L+E M       N  TF  LI    +    ++  ++  +M + G
Sbjct: 226 GLCMARRWGHVQ---DLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG 282

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELT 257
            A D  MY  II G+CK ++LE+A  + + M   G++P+   +  L K + S     E  
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            L+ E++ D+D     +  N ++  L  NG +D+   +L+ M++                
Sbjct: 343 GLLAEMF-DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE---------------H 386

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G + P+  ++  +IN   K+G +D A+ L R M   GC  N   Y  ++ GLC++ R  +
Sbjct: 387 GCM-PDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVD 445

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + EL+ +M + G  P   T N++   LC++  V  A+ L+++M V G  P +   + +I 
Sbjct: 446 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 505

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            L K G   EA   L  MV++G  P+ + YS+    L    R++  +++F +I       
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS 565

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D V YN +IS LCK      A +    M++ G +P+ +TY +LI G    G + +A   L
Sbjct: 566 DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625

Query: 558 SRMLEK 563
           + +  K
Sbjct: 626 TELCSK 631



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 37/383 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+PN  ++  ++  L   G++  AL++  +M + GC     +Y+  ++  C ++    + 
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKE 438
            +LR++   G        N + + +C +  V  A+ L+R +    G EP V     +++ 
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LC   +       + +MV  G  P+IV +S  IG L      +   E+   +  HGC PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING------W-------- 544
           V  Y  II G+CK +R+  A  + N M + GL P+V  YN L+ G      W        
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 545 ---------------------CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                                C++G +D+ +  L +MLE     PDVITYTT+I+G C  
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE-HGCMPDVITYTTVINGFCKE 405

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D+A+ML   M   GC PN +++  ++ GLC  +R   A      M ++G  P+   F
Sbjct: 406 GLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTF 465

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             LI+    +     A E+LK+M
Sbjct: 466 NTLINFLCKKGLVEQAIELLKQM 488



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 20/353 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E A  + +++   GL  PN   YN LL+ LC +   +  E  L EM D     D  T  
Sbjct: 303 LEVARGILNRMPSYGLS-PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFN 361

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C +G  D+ + V  ++++HG + + + ++ ++  F K G +D+A  L+  M  C
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
             R N  ++ +++ G     R   A +L  +M + G   +   ++ +I  LCK   +E A
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
           ++L  +M  +G +PD    S +I      G     L +  +   + ++  T++ +SI   
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASA 541

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G I++   +       E I D           TV  +   ++ +I++L K G+ D 
Sbjct: 542 LSGEGRINKVIQMF------ENIQDT----------TVRSDAVLYNAVISSLCKRGETDR 585

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           A+     M   GC+ N   Y  LI GL +   ++E+ E+L E+   G    H 
Sbjct: 586 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHL 638



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 2/197 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R      L   +++  C  +P     LI  L   GLVE+A  L  Q+   G C P
Sbjct: 437 LCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSP 495

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SY+ +++ L K+ + D     L  M   G   +    + +       G+ +K + +F
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMF 555

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             I D     + V ++ ++ +  K GE D+A E +  M       NE T+ +LI G   +
Sbjct: 556 ENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASE 615

Query: 184 SRVDKALQLFDKMTKSG 200
             V +A ++  ++   G
Sbjct: 616 GFVKEAQEILTELCSKG 632


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 158/615 (25%), Positives = 291/615 (47%), Gaps = 28/615 (4%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLKEMQDYGWGYD 100
           L E  ++L  ++   G C P+  SYN LL+  C       +++L+ M + + Q      +
Sbjct: 145 LREAMDILIKRMPELG-CTPDVVSYNTLLKGFCNEKRAEEALELLHM-MADSQGRSCPPN 202

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             +   ++  +   GQ DKA ++F E++D G     V ++ ++    K   VD+A  + +
Sbjct: 203 VVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           +M D  ++ +  T+  LIHG++   +  + +++ ++M+  G   D   Y  ++  LC N 
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           +   A   +  M   GI P+  I   LI   + +G L+ +                 + +
Sbjct: 323 RCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM-----------------HDL 365

Query: 280 MRILVSNG-SIDQA-YNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLK 336
           + ++V NG S D   +N++      + + D  + +    K   +SP+  +F  +I+ L K
Sbjct: 366 LNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G++D A+  F +M   G   N+F++N+L+ GLC  ++ E++ E   EM   G +P    
Sbjct: 426 LGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVF 485

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC +  V+ A  L+  M   G  P V   T LI   C  G+  EA + L  M+
Sbjct: 486 FNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML 545

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD   Y+  + G     R+D A  +FR++  +G  P VV Y+ I+ GL   +R +
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA++L+  MIT G   ++  YN+++NG  K+  +D+A      +  K+    ++ T+  +
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF-QLEITTFNIM 664

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I  L  +GR +DA+ L+  +   G  P+  T+  +   L +          F  M++ G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 637 KPDMFVFVALISAFL 651
            P+  +  AL+   L
Sbjct: 725 TPNSRMLNALVRRLL 739



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/606 (25%), Positives = 273/606 (45%), Gaps = 57/606 (9%)

Query: 52  LFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LF+++ RE      P+  +Y+ L+   C+   ++        +   GW  +   +  LL+
Sbjct: 78  LFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 110 VYCNSGQFDKALSVF-NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
             C++ +  +A+ +    + + G   + V ++ LL  F      ++A EL+  M D   R
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 168 L---NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               N  ++  +I+GF  + +VDKA  LF +M   G   +   Y  +I GLCK + ++ A
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             ++ +M   G+ PD +  + LI      G+        W++            ++R+L 
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK--------WKE------------VVRML- 296

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                             E ++  G++          P+  ++  ++N L  +G+   A 
Sbjct: 297 ------------------EEMSAHGLK----------PDCYTYGSLLNYLCNNGRCREAR 328

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
             F  M + G   NV +Y  LI G      L E ++LL  M E+G  P H   N +F   
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            ++  +  A+++  KM+ QG  P V +   LI  LCK G+  +A      M+ EG  P+I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             +++ + GL  + + + A E + ++   G  PDVV +N I+  LC   +V +A+ L + 
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   G  P V +Y  LI G C  G ID+A   L  ML      PD  TY TL+ G C AG
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYNTLLHGYCRAG 567

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R DDA  ++ EM   G  P  +T+  ++ GL    R   A   +  M   G + +++++ 
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627

Query: 645 ALISAF 650
            +++  
Sbjct: 628 IILNGL 633



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/627 (24%), Positives = 275/627 (43%), Gaps = 29/627 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQD 94
           LI C   +G +E     F  + + G  V NN   N LL+ LC +  + + +++ +K M +
Sbjct: 100 LIGCFCRMGRLEHGFATFGLILKSGWRV-NNIVINQLLKGLCDAKRLREAMDILIKRMPE 158

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW----VDEHVFSILLVAFSKWGE 150
            G   D  +   LL+ +CN  + ++AL + + + D        +   ++ ++  F   G+
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQ 218

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VDKA  L   M D  I+ N  T+  +I G  K   VD+A  +F +M   G   D   Y+ 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR 267
           +I G     + +  +++  EM   G+ PD      L+    + G   E       +   +
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR-K 337

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            +     +   ++    + G++ + ++LL  M++                  +SP+   F
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN----------------GLSPDHHIF 381

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +II     K   +D A+ +F +M Q G   +V  +  LID LC   R++++     +M  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P  F  NS+   LC       A     +M  QG  P V     ++  LC  G+ M+
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R +  M + G  PD++ Y+  IGG   + R+D A +    + + G  PD   YN ++ 
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C+A R+ +A  +F EM+  G+ P V TY+ +++G   +    +A      M+   SG 
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT--SGK 619

Query: 568 P-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             ++  Y  +++GL      D+A  L+  +  K       TF  +I  L K  R   A+ 
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
            F  +   G+ PD+F +  +    + E
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEE 706



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 242/528 (45%), Gaps = 32/528 (6%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+ A  +F Q+  +G+  P+N +YNCL+           V   L+EM  +G   D YT 
Sbjct: 253 VVDRAEGVFQQMIDKGV-KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTY 311

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   CN+G+  +A   F+ +I  G   +  ++ IL+  ++  G + +  +L+  M +
Sbjct: 312 GSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  +   F ++   + KK+ +D+A+ +F+KM + G + D   +  +I  LCK  +++ 
Sbjct: 372 NGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDD 431

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSC--------SDEGELTLLVKEIWEDRDVNTMTLL 275
           A+  +++M   G+ P+  + + L+           + E    +L + I  D  V   T+L
Sbjct: 432 AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV-VFFNTIL 490

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN     L + G + +A  L+  M +      VG            P+  S+  +I    
Sbjct: 491 CN-----LCTKGQVMKAQRLIDLMER------VGTR----------PDVISYTTLIGGHC 529

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G++D A      M  +G   + + YN L+ G C + R++++Y + REM  +G  P   
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   L   +    A  L   M   G +  +    +++  L K+    EAF+    +
Sbjct: 590 TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             + F  +I  ++  IG L    R + A+ LF  I ++G  PDV  Y +I   L +   +
Sbjct: 650 CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYL 709

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            E +DLF+ M   G  P+    N L+      G+I +A   LS++ EK
Sbjct: 710 EEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 41/319 (12%)

Query: 341 DLALSLFREMTQ---IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           +L +SLF  M +   I    ++  Y+ LI   C   RLE  +     + +SG++  +  +
Sbjct: 73  ELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVI 132

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N + + LC  + +  A+++                  LIK                 M +
Sbjct: 133 NQLLKGLCDAKRLREAMDI------------------LIKR----------------MPE 158

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQR 514
            G  PD+V Y+  + G  + KR + ALEL     D     C P+VV+Y  +I+G     +
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQ 218

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V +A +LF EM+ +G+ P+V TY  +I+G CK+  +D+A     +M++K    PD  TY 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDTYN 277

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI G    G+  + + +  EM   G  P+  T+ +L+  LC   R R A   F  M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 635 GMKPDMFVFVALISAFLSE 653
           G+KP++ ++  LI  + ++
Sbjct: 338 GIKPNVAIYGILIHGYATK 356



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 188/436 (43%), Gaps = 59/436 (13%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + F  LI  L  +G V++A + F+Q+  EG+  PN + +N L+  LC     +  
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLVYGLCTVDKWEKA 467

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           +    EM + G   D      +L   C  GQ  KA  + + +   G   + + ++ L+  
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G +D+A + ++ M    ++ +E T+  L+HG+ +  R+D A  +F +M ++G    
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  I+ GL   ++   A +LY  M  SG   +                       IW
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN-----------------------IW 624

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                     + N I+  L  N  +D+A+ L Q++       D  +E+            
Sbjct: 625 ----------IYNIILNGLSKNNCVDEAFKLFQSLCS----KDFQLEI------------ 658

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           ++F+I+I  L K G+ + A+ LF  ++  G + +VF Y  + + L     LEE  +L   
Sbjct: 659 TTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK--- 441
           ME+SG  P    LN++ R L  R D+  A   + K+  +          +LI  L +   
Sbjct: 719 MEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEY 778

Query: 442 --HGKAM-EAFRFLTD 454
             H  ++ E +R L +
Sbjct: 779 HHHATSLPEKYRVLNE 794


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 158/672 (23%), Positives = 277/672 (41%), Gaps = 74/672 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L    L   A  LF  + R     P   +YN ++ +LC+   +      L  M   
Sbjct: 123 LLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRS 182

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           GW  D YT   L+  YC + Q D A  +F+++   G+  + V ++ L+    + G +D+A
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 242

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL   MD  ++ +    +  L+ G     R ++ L +  +M + G+      Y  ++  
Sbjct: 243 VELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 298

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
            C+ ++ + A ++  EM   G+ P     + +I +   EG ++  L V E+ + R     
Sbjct: 299 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 358

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N++++   + G + +A  LL  M                    V+P+  +++++I 
Sbjct: 359 VWTYNALVQGFCNEGKVHKAMTLLNKM----------------RACGVNPDAVTYNLLIR 402

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
               DG ++ A  L R M   G + + + YN LI+ LC   R +++  L   +E  G KP
Sbjct: 403 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 462

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T NS+   LC+      A   + KM   G  P     +  I+ LCK   + E   F+
Sbjct: 463 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 522

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+Q+   P  V Y+  I  L+  +   L    + ++ + GC PDVV Y   +   C  
Sbjct: 523 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 582

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------ 560
            R+ EAE++  EM   G+      YN L++G    G  D A+  L +M            
Sbjct: 583 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 642

Query: 561 ---------------------------------------LEKESGSPDVITYTTLIDGLC 581
                                                  ++K    P+  TY+++++G  
Sbjct: 643 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             GR ++A  L + M+E   + N   + AL+T  CK  R   A V    M + G  P + 
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 762

Query: 642 VFVALISAFLSE 653
            +  L+S  + E
Sbjct: 763 SYQHLLSGLICE 774



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 268/642 (41%), Gaps = 54/642 (8%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PLR  AQDVV         +   LI  L   G ++EA  LF ++ +     P+ + Y  L
Sbjct: 215 PLRGFAQDVV---------SYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAAL 260

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++ LC +   +   + L+ M++ GW         ++   C   +  +A  +  E+ + G 
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320

Query: 133 VDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V  + ++ A+ K G +  A  ++E M     + N  T+  L+ GF  + +V KA+ 
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L +KM   G   DA  Y+++I G C +  +E A +L   M+G G+  D    + LI +  
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440

Query: 252 DEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
            +G         +  E R +    +  NS++  L  +G  D A+  L+ M+      D  
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500

Query: 310 -----VEMLMIFKGT--------------VSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                +E L   KG+              V P+T ++ I+I+ LLK+    L    + EM
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +V  Y   +   C   RL E+  +L EM ++G        N++          
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG--------------KAME---AFRFLT 453
             A++++++M      P      +L++ L +                KA+E    F    
Sbjct: 621 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 680

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M +  FLP+   YS+ + G  +  R + A  L   +       +   Y  +++  CK++
Sbjct: 681 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 740

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R  +A  L   MI  G IP + +Y  L++G    G  D+A         K+  SPD I +
Sbjct: 741 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY-SPDEIVW 799

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             +IDGL   G  D +  +   +E   C P+  T+  L   L
Sbjct: 800 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 220/530 (41%), Gaps = 55/530 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           F+ LL   S++     A  L   M           T+  +I    +++ + +AL+    M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG+  DA  ++ +I G C+  Q+++A  L+ +M   G   D    + LI     EG  
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLI-----EG-- 232

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                             LC +        G ID+A  L   M +               
Sbjct: 233 ------------------LCEA--------GRIDEAVELFGEMDQ--------------- 251

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+   +  ++  L    + +  L + R M ++G   +   Y  ++D  C   + +
Sbjct: 252 -----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ E+L+EM E G  P   T  ++    C+   +  AL ++  M+++G +P V     L+
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           +  C  GK  +A   L  M   G  PD V Y+  I G      ++ A  L R +   G  
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D   YN +I+ LCK  R  +A  LF+ + T+G+ P+  T+N LING CKSG  D A   
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L +M+     +PD  TY++ I+ LC      + +    EM +K   P+ + +  +I  L 
Sbjct: 487 LEKMVSA-GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 545

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K          +  M   G  PD+  +   + A+  E     A  VL EM
Sbjct: 546 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 595


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 228/491 (46%), Gaps = 53/491 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF +  +  KA  + + + +SG   D   Y+V+I G CK+ +++ ALQ+   M    
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN--- 211

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD                                  +  N+I+R L  +G + QA  +
Sbjct: 212 VAPDV---------------------------------VTYNTILRTLCDSGKLKQAMEV 238

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L   ++ E                  P+  ++ I+I    K+  +  A+ L  EM   G 
Sbjct: 239 LDRQLQKE----------------CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS 282

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  YN LI+G+C   RL+E+ + L  M   G +P   T N + R +C     + A  
Sbjct: 283 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 342

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+  M  +G  P V    +LI  LC+ G    A   L  M   G  P+ + Y+  + G  
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFC 402

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             K++D A+E    + + GC PD+V YN +++ LCK  +V  A ++ N++ +KG  P + 
Sbjct: 403 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 462

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I+G  K G  ++A+  L  M  ++   PD+ITY++L+ GL   G+ D+AI  +++
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEM-RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +E  G  PN IT+ +++ GLCK  +   A+     M  K  KP    +  LI     E  
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 581

Query: 656 PPLAFEVLKEM 666
              A ++L E+
Sbjct: 582 AKEALDLLNEL 592



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 225/474 (47%), Gaps = 28/474 (5%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T L++ +C  G+  KA  V   +   G V D   +++L+  + K GE+D A ++++RM  
Sbjct: 153 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM-- 210

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            N+  +  T+  ++       ++ +A+++ D+  +     D   Y ++I   CK   +  
Sbjct: 211 -NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           A++L  EM+  G  PD    + LI     EG L   +K +            +  N I+R
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            + S G    A  LL  M++               KG  SP+  +F+I+IN L + G L 
Sbjct: 330 SMCSTGRWMDAEKLLSDMLR---------------KG-CSPSVVTFNILINFLCRQGLLG 373

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ +  +M   GC  N   YN L+ G C   +++ + E L  M   G  P   T N++ 
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 433

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   V  A+ ++ ++  +G  P +     +I  L K GK   A + L +M ++G  
Sbjct: 434 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDI+ YS+ + GL    +VD A++ F D+   G  P+ + YN I+ GLCK+++   A D 
Sbjct: 494 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDV 570
              MI+K   P+ ATY +LI G    G   +A+     LC SR L K+S +  V
Sbjct: 554 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC-SRGLVKKSSAEQV 606



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 199/393 (50%), Gaps = 23/393 (5%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADV-------------------GVEMLMIFKGTV 320
           +R LV NG ++  +  L++M+    I D+                      M ++ +   
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  +++++I+   K G++D AL +   M       +V  YN ++  LC+S +L+++ E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L    +    P   T   +    C+   V  A+ L+ +MR +G +P V    +LI  +C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  EA +FL +M   G  P+++ ++  +  +    R   A +L  D+   GC P VV
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +NI+I+ LC+   +  A D+  +M   G  P+  +YN L++G+CK   +D+A+  L  M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + +    PD++TY TL+  LC  G+ D A+ + N++  KGC+P  IT+  +I GL K  +
Sbjct: 418 VSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              A+     M+ KG+KPD+  + +L+S    E
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 227/499 (45%), Gaps = 58/499 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR    +G  ++A  + + +++ G  VP+  +YN L+   CKS  +D     L  M   
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSG-AVPDVITYNVLISGYCKSGEIDNALQVLDRMN-- 211

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFN-EIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
               D  T   +L+  C+SG+  +A+ V + ++    + D   ++IL+ A  K   V +A
Sbjct: 212 -VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L++ M +   + +  T+ VLI+G  K+ R+D+A++  + M   G   +   +++I+  
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           +C   +   A +L S+M   G +P     + LI     +G L   + +I E   ++  T 
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI-DILEKMPMHGCTP 389

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIIN 332
             NS+            +YN L      E   D  +E L  M+ +G   P+  +++ ++ 
Sbjct: 390 --NSL------------SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY-PDIVTYNTLLT 434

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L KDGK+D+A+ +  +++  GC   +  YN +IDGL    + E + +LL EM   G KP
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T +S                                   L+  L + GK  EA +F 
Sbjct: 495 DIITYSS-----------------------------------LVSGLSREGKVDEAIKFF 519

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            D+   G  P+ + Y++ + GL   ++ D A++    + +  C P    Y I+I G+   
Sbjct: 520 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYE 579

Query: 513 QRVAEAEDLFNEMITKGLI 531
               EA DL NE+ ++GL+
Sbjct: 580 GLAKEALDLLNELCSRGLV 598



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 2/239 (0%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+++  C  S      LI  L   GL+  A  + +++   G C PN+ SYN LL   
Sbjct: 343 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGF 401

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK   +D     L  M   G   D  T   LL   C  G+ D A+ + N++   G     
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++ ++   SK G+ ++A +L++ M    ++ +  T+  L+ G  ++ +VD+A++ F  
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 521

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +   G   +A  Y+ I+ GLCK++Q + A+   + M      P     + LI   + EG
Sbjct: 522 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 20  DVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           D++ SR C+        L+  L   G V+ A  + +Q+  +G C P   +YN +++ L K
Sbjct: 415 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNTVIDGLSK 473

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
               +     L EM+  G   D  T + L+      G+ D+A+  F+++   G     + 
Sbjct: 474 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 533

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ +++   K  + D+A + +  M     +  E T+ +LI G   +    +AL L +++ 
Sbjct: 534 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 593

Query: 198 KSGFASDAAMYDVII 212
             G    ++   V +
Sbjct: 594 SRGLVKKSSAEQVAV 608


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 249/550 (45%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D ALS FN ++  H       F+ LL + +K         L  +MD   +  N  T  +L
Sbjct: 47  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 106

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F   +RV  A  +  K+ K G   D   +  +I GLC   ++  AL L+ +M   G 
Sbjct: 107 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 166

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P+                             V T   L N + ++    G+   A  LL
Sbjct: 167 QPN-----------------------------VVTYGTLINGLCKV----GNTSAAIRLL 193

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           ++M +G                   P+   +  II++L KD ++  A +LF +M   G  
Sbjct: 194 RSMEQG----------------NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 237

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++F Y +L+  LCN    +    LL +M  S   P     +++   LC+   V  A  +
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 297

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           V  M  +G EP V   T L+   C   +  EA +    MV++GF PD++ Y+  I G   
Sbjct: 298 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 357

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I ++D A+ LF ++C     PD   YN ++ GLC   R+ +A  LF+EM+ +G +P + T
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++L++  CK+ ++++AM  L + +E  + +PD+  Y  +IDG+C AG  + A  L++ +
Sbjct: 418 YSILLDSLCKNRHLEEAMALL-KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 476

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  P+  T+  +I GLCK      A   F  M      PD   +  +   FL     
Sbjct: 477 SSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNET 536

Query: 657 PLAFEVLKEM 666
             A ++L+EM
Sbjct: 537 LRAIQLLEEM 546



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 233/505 (46%), Gaps = 23/505 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   + YTL  L+  +C+  +   A SV
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++ +A  L ++M D   + N  T+  LI+G  K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     D  +Y  II  LCK++Q+  A  L+S+M G GI+PD   
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 243 LSKLITS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + L+ +    C  +   TLL + +  +  +    ++ ++++  L   G + +A+ ++  
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMV--NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MI+       GVE          P+  ++  +++      ++D A+ +F  M + G   +
Sbjct: 301 MIQ------RGVE----------PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V  Y  LI+G C  ++++++  L  EM    + P   T N++   LC    +  A+ L  
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFH 404

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  +G  P +   ++L+  LCK+    EA   L  +      PDI  Y+  I G+    
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A +LF ++ + G  P V  YNI+I GLCK   + EA  LF EM      P   TYN
Sbjct: 465 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYN 524

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEK 563
            +  G+ ++    +A+  L  ML +
Sbjct: 525 TIARGFLQNNETLRAIQLLEEMLAR 549



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 1/311 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD ALS F  +  +    ++  +  L+  +           L  +M+  G  P  +TLN 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    V  A +++ K+   GH+P     T LI+ LC  GK  EA      M+ EG
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F P++V Y   I GL  +     A+ L R +    C PDVV Y  II  LCK ++V EA 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +LF++M+ +G+ P + TY  L++  C           L++M+  +   PDV+ ++T++D 
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI-LPDVVIFSTVVDA 284

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+  +A  + + M ++G  P+ +T+  L+ G C       A+  F MM  KG  PD
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344

Query: 640 MFVFVALISAF 650
           +  +  LI+ +
Sbjct: 345 VISYTTLINGY 355



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 195/458 (42%), Gaps = 24/458 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN Y+ N L+ + C    V      L ++   G   D  T T L++  C  G+  +AL +
Sbjct: 98  PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 157

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+++ID G+    V +  L+    K G    A  L+  M+  N + +   +  +I    K
Sbjct: 158 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 217

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V +A  LF +M   G + D   Y  ++  LC   + +    L ++M  S I PD  I
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277

Query: 243 LSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S ++ +   EG++T    + ++   R V    +   ++M        +D+A  +   M+
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337

Query: 301 KGEPIADVGVEMLMIFKGTVS--------------------PNTSSFDIIINTLLKDGKL 340
           +     DV +    +  G                       P+T +++ ++  L   G+L
Sbjct: 338 RKGFAPDV-ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A++LF EM   G M ++  Y+ L+D LC +  LEE+  LL+ +E S   P     N +
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              +CR  ++  A +L   +  +G  P V    ++I  LCK G   EA +   +M     
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            PD   Y+    G +       A++L  ++ A G   D
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 28/398 (7%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        +M 
Sbjct: 174 GTLINGLCKVGNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T T L+   CN  ++    ++ N++++   + D  +FS ++ A  K G+V 
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 292

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A E+++ M    +  +  T+  L+ G   +S +D+A+++FD M + GFA D   Y  +I
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------D 266
            G CK  +++ A+ L+ EM      PD +  + L+      G L   +    E       
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            D+ T ++L +S    L  N  +++A  LL+A                I    ++P+   
Sbjct: 413 PDLVTYSILLDS----LCKNRHLEEAMALLKA----------------IEASNLNPDIQV 452

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++III+ + + G+L+ A  LF  ++  G   +V+ YN +I GLC    L E+ +L  EM+
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 512

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            +   P   T N++ R   +  + + A+ L+ +M  +G
Sbjct: 513 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 37/230 (16%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +FD + R+G   P+  SY  L+   CK   +D      +EM    W  D  T  
Sbjct: 326 MDEAVKVFDMMVRKGFA-PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-------------------------------- 133
            L+   C+ G+   A+++F+E++  G +                                
Sbjct: 385 TLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEAS 444

Query: 134 ----DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
               D  V++I++    + GE++ A +L   +    +  +  T+ ++IHG  K+  +++A
Sbjct: 445 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 504

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            +LF +M  +  + D   Y+ I  G  +N +   A+QL  EM   G + D
Sbjct: 505 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 172/638 (26%), Positives = 281/638 (44%), Gaps = 38/638 (5%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L   G   EA  +F  +K  GL VP++ +YN +++   K   +D     L EM +     
Sbjct: 480  LAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
            D   +  L+     + + D+A  +F  + +       V ++ LL    K G++ +A EL 
Sbjct: 539  DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M       N  TF  L     K   V  AL++  KM   G   D   Y+ II GL KN
Sbjct: 599  EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 219  KQLEMALQLYSEMKGSGITPDF--------------------EILSKLITSCSDEGELTL 258
             Q++ A+  + +MK   + PDF                    +I++  + SC+D+     
Sbjct: 659  GQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQP---- 713

Query: 259  LVKEIWEDRDVNTMTLL----CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                 WED   + +         S    LV+NG      ++L  +I+     +      M
Sbjct: 714  -ANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARM 772

Query: 315  IFKG-----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
            +F+       V P   +++++I  LL+   +++A  +F ++   GC+ +V  YN L+D  
Sbjct: 773  LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY 832

Query: 370  CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK-MRVQGHEPW 428
              S +++E +E+ +EM     +P   T N +   L +  +V  AL+L    M  +   P 
Sbjct: 833  GKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 892

Query: 429  VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                  LI  L K G+  EA +    M   G  P+   Y+  I G       D A  LF+
Sbjct: 893  ACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFK 952

Query: 489  DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
             +   G  PD+  Y++++  LC   RV E    F E+   GL P V  YNL+ING  K  
Sbjct: 953  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012

Query: 549  NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
             +++A++  + M +    +PD+ TY +LI  L IAG  ++A  ++NE++  G  PN  TF
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072

Query: 609  MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             ALI G     +P  A   ++ M   G  P+   +  L
Sbjct: 1073 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 178/705 (25%), Positives = 313/705 (44%), Gaps = 95/705 (13%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           IR LG  G + EA  +  ++  EG C P+  +Y  L++ALC +  +D  +    +M+   
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGR 325

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   LL  + ++   D     ++E+   G V + V F+IL+ A  K G   +A 
Sbjct: 326 HKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 385

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
             ++ M D  I  N  T+  LI G ++  R+D AL++FD M   G    A  Y V I   
Sbjct: 386 AKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYY 445

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--T 273
            K+     AL+ + +MK  GI P+    +  + S +  G      +  +  +D+  +  +
Sbjct: 446 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 505

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKG--EP--------------------------- 304
           +  N +M+     G ID+A  LL  M++   EP                           
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565

Query: 305 ----------------IADVG-----VEMLMIFKGTVS----PNTSSFDIIINTLLKDGK 339
                           +A +G      E + +F+G V     PNT +F+ + + L K+ +
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE------------ 387
           + LAL +  +M  +GC+ +VF YN +I GL  + +++E+     +M++            
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 685

Query: 388 ------SGFKPTHFTLNSMFRCLCRRQ-------DVVGAL-------NLVR-KMRVQGHE 426
                 +G     + + + F   C  Q       D++G++       N V    R+  + 
Sbjct: 686 LPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANG 745

Query: 427 PWVKHNTLL---IKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDL 482
                +++L   I+   KH  A  A        ++ G  P +  Y+  IGGL++   +++
Sbjct: 746 ICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 805

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A ++F  +   GC PDV  YN ++    K+ ++ E  +++ EM      P+  T+N++I+
Sbjct: 806 AQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVIS 865

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G  K+GN+D A+     ++     SP   TY  LIDGL  +GR  +A  L+  M + GC 
Sbjct: 866 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR 925

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           PN   +  LI G  K     AA   F+ M ++G++PD+  +  L+
Sbjct: 926 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 970



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 166/669 (24%), Positives = 306/669 (45%), Gaps = 34/669 (5%)

Query: 28   MSPGALGFL--IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            + P A  ++  I   G  G    A   F+++K +G+  PN  + N  L +L K+      
Sbjct: 431  VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREA 489

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            +     ++D G   D  T   +++ Y   G+ D+A+ + +E++++    D  V + L+  
Sbjct: 490  KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINT 549

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              K   VD+A ++  RM +  ++    T+  L+ G  K  ++ +A++LF+ M + G   +
Sbjct: 550  LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 609

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT------- 257
               ++ +   LCKN ++ +AL++  +M   G  PD    + +I      G++        
Sbjct: 610  TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 669

Query: 258  LLVKEIWEDRDVNTMTLLCNSIMRILVSNGS----------IDQAYNLLQAMIKGEPIAD 307
             + K ++ D  V   TLL   +   L+ +             DQ  NL    + G  +A+
Sbjct: 670  QMKKLVYPDF-VTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAE 728

Query: 308  VGVEMLMIF------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVF 360
             G++  + F       G      S    II    K      A  LF + T+ +G    + 
Sbjct: 729  AGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLP 788

Query: 361  LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             YN LI GL  ++ +E + ++  +++ +G  P   T N +     +   +     + ++M
Sbjct: 789  TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848

Query: 421  RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKR 479
                 EP    + ++I  L K G   +A     D++ +  F P    Y   I GL    R
Sbjct: 849  SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908

Query: 480  VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            +  A +LF  +  +GC P+   YNI+I+G  KA     A  LF  M+ +G+ P + TY++
Sbjct: 909  LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968

Query: 540  LINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L++  C  G +D+ +     +  KESG +PDV+ Y  +I+GL    R ++A++L+NEM++
Sbjct: 969  LVDCLCMVGRVDEGLHYFREL--KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK 1026

Query: 599  -KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
             +G  P+  T+ +LI  L        A   +  ++  G++P++F F ALI  +     P 
Sbjct: 1027 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1086

Query: 658  LAFEVLKEM 666
             A+ V + M
Sbjct: 1087 HAYAVYQTM 1095



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/623 (24%), Positives = 274/623 (43%), Gaps = 67/623 (10%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +++  L   G +EE   +FD +++  +    N +Y  + + L     +      L++M++
Sbjct: 125 YMLEALRVDGKIEEMAYVFDLMQKRIIKRDTN-TYLTIFKCLSVKGGLRQAPFALRKMRE 183

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDK 153
           +G+  + Y+   L+ +   S    +A+ V+  +I  G+      +S L+V   K  +++ 
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
              L++ M+   ++ N  TF + I    +  ++++A ++  +M   G   D   Y V+I 
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED------- 266
            LC  ++L+ A +++++MK     PD      L+   SD  +L   V + W +       
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVNQFWSEMEKDGHV 362

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            DV T T+L +++ +          A N  +A  K + + D G          + PN  +
Sbjct: 363 PDVVTFTILVDALCK----------AGNFGEAFAKLDVMRDQG----------ILPNLHT 402

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I  LL+  +LD AL +F  M                                   E
Sbjct: 403 YNTLICGLLRVHRLDDALEIFDNM-----------------------------------E 427

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G KPT +T         +  D V AL    KM+ +G  P +      +  L K G+  
Sbjct: 428 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 487

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA +    +   G +PD V Y+  +     +  +D A++L  ++  + C PDV+  N +I
Sbjct: 488 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLI 547

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + L KA RV EA  +F  M    L P+V TYN L+ G  K+G I +A+     M++K   
Sbjct: 548 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GC 606

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+ IT+ TL D LC       A+ +  +M + GC P+  T+  +I GL K  + + A+ 
Sbjct: 607 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 666

Query: 627 HFRMMKEKGMKPDMFVFVALISA 649
            F  MK K + PD      L+  
Sbjct: 667 FFHQMK-KLVYPDFVTLCTLLPG 688



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 237/549 (43%), Gaps = 59/549 (10%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+  LG  G ++EA  LF+ + ++G C PN  ++N L + LCK+  V L    L +M D 
Sbjct: 581  LLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 639

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
            G   D +T   ++     +GQ  +A+  F+++    + D      LL    K G ++ A 
Sbjct: 640  GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAY 699

Query: 156  ELI------------------------------------ERMDDCNI-RLNEKTFCVLIH 178
            ++I                                    ER+    I R  +     +I 
Sbjct: 700  KIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 759

Query: 179  GFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
               K +    A  LF+K TK  G       Y+++IGGL +   +E+A  ++ ++K +G  
Sbjct: 760  YSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCI 819

Query: 238  PDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            PD    + L+ +    G++  L  EI+++    +    T+  N ++  LV  G++D A +
Sbjct: 820  PDVATYNFLLDAYGKSGKIDELF-EIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALD 878

Query: 295  LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            L   ++                    SP   ++  +I+ L K G+L  A  LF  M+  G
Sbjct: 879  LYYDLMSDRDF---------------SPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYG 923

Query: 355  CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            C  N  +YN LI+G   +   + +  L + M + G +P   T + +  CLC    V   L
Sbjct: 924  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 983

Query: 415  NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ-EGFLPDIVCYSAAIGG 473
            +  R+++  G  P V    L+I  L K  +  EA     +M +  G  PD+  Y++ I  
Sbjct: 984  HYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILN 1043

Query: 474  LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            L     V+ A +++ +I   G  P+V  +N +I G   + +   A  ++  M+T G  P+
Sbjct: 1044 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103

Query: 534  VATYNLLIN 542
              TY  L N
Sbjct: 1104 TGTYEQLPN 1112



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 199/450 (44%), Gaps = 69/450 (15%)

Query: 231 MKGSGIT---------PDFEI--LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           MK SG +         PD     +++++ S  D        K +  + ++   T  CN +
Sbjct: 67  MKSSGFSGSMIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYM 126

Query: 280 MRILVSNGSIDQ---AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           +  L  +G I++    ++L+Q  I                   +  +T+++  I   L  
Sbjct: 127 LEALRVDGKIEEMAYVFDLMQKRI-------------------IKRDTNTYLTIFKCLSV 167

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G L  A    R+M + G + N + YN LI  L  S    E+ E+ R M   GF+P+  T
Sbjct: 168 KGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQT 227

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            +S+   L +R+D+   + L+++M   G +P V   T+ I+ L + GK  EA+  L    
Sbjct: 228 YSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL---- 283

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
                                KR+D            GC PDVV Y ++I  LC A+++ 
Sbjct: 284 ---------------------KRMD----------DEGCGPDVVTYTVLIDALCTARKLD 312

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A+++F +M T    P   TY  L++ +  + ++D      S M EK+   PDV+T+T L
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM-EKDGHVPDVVTFTIL 371

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +D LC AG   +A    + M ++G  PN  T+  LI GL +  R   AL  F  M+  G+
Sbjct: 372 VDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGV 431

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           KP  + ++  I  +    +   A E  ++M
Sbjct: 432 KPTAYTYIVFIDYYGKSGDSVSALETFEKM 461


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 151/599 (25%), Positives = 280/599 (46%), Gaps = 29/599 (4%)

Query: 62  CVPNNYSYNCLLEALCKSC----SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           C+P+  SYN LL+ LC       +++L+ M + + Q +    +  + + ++  +   GQ 
Sbjct: 161 CMPDTVSYNILLKGLCNEKRAEEALELLHM-MADDQVWSCPPNVVSYSTVINGFFTEGQV 219

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           DK  ++F E++D G   + V ++ ++    K    D+A  + ++M D  ++ N  T+  L
Sbjct: 220 DKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCL 279

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           IHG++   +  + +++ ++M+  G   +   Y  ++  LCKN +   A   +  M G GI
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGI 339

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P       ++   + +G L+ +                 + ++ ++V+NG I   +++ 
Sbjct: 340 KPSVTTYGIMLHGYATKGALSEM-----------------HDLLNLMVANG-ISPNHHIF 381

Query: 297 QAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
                      +  + + IF    +  +SP+  S+  +I+ L K G++D A   F +M  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++ ++++L+ GLC  ++ E+  EL  EM   G  P     N++   LC+   V+ 
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
              LV  +   G  P V     LI   C  G   EA + L  MV  G  PD   Y+  + 
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G     R+D A   FR + ++G  P VV YN I+ GL + +R +EA++L+  MI  G   
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TYN+++NG CKS  +D+A+     +  K     ++IT+  +I  L   GR +DA+ L
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSK-GLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           +  +   G   N +T+  ++  L +          F  M++ G  P+  +  AL+   L
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 281/632 (44%), Gaps = 33/632 (5%)

Query: 52  LFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LF+++ R+      PN  +Y+ L+   C+   ++        +   GW  D   +  LL 
Sbjct: 78  LFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLN 137

Query: 110 VYCNSGQFDKALSVF-NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI- 166
             C+  +  +A+ V    + + G + + V ++ILL         ++A EL+  M D  + 
Sbjct: 138 GLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVW 197

Query: 167 --RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               N  ++  +I+GF  + +VDK   LF +M   G   D   Y  +I GLCK +  + A
Sbjct: 198 SCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRA 257

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN--SIMRI 282
             ++ +M  +G+ P+ +  + LI      G+   +V+ + E          C   S++  
Sbjct: 258 EAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317

Query: 283 LVSNGSIDQAYNLLQAMI-KG--EPIADVGV------------EM-----LMIFKGTVSP 322
           L  NG   +A     +MI KG    +   G+            EM     LM+  G +SP
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG-ISP 376

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N   F+I  +   K G +D A+ +F +M Q G   +   Y  LID LC   R++++    
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M   G  P     +S+   LC          L  +M   G  P +     ++  LCK 
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE 496

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+ ME  R +  +   G  PD++ Y+  I G      +D A +L   + + G  PD  +Y
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N ++ G CKA R+  A   F +M++ G+ P V TYN +++G  ++    +A      M+ 
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 616

Query: 563 KESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             SG+  D+ TY  +++GLC +   D+AI ++  +  KG   N ITF  +I  L K  R 
Sbjct: 617 --SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A+  F  +   G+  ++  +  ++   + E
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEE 706



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 161/642 (25%), Positives = 289/642 (45%), Gaps = 57/642 (8%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G++++A  +F++++++GL  P+  SY  L++ALCK   VD  E++  +M + G   D   
Sbjct: 392  GIIDKAMDIFNKMRQQGLS-PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMD 162
             + L+   C   +++K   +F E+++ G     VF + +L    K G V +   L++ ++
Sbjct: 451  FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +R +  ++  LI G      +D+A +L + M   G   D+  Y+ ++ G CK  +++
Sbjct: 511  CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570

Query: 223  MALQLYSEMKGSGITPDF----EILSKLITS--CSDEGELTLLVKEIWEDRDVNTMTLLC 276
             A   + +M  +GITP       IL  L  +   S+  EL L +       D+ T  ++ 
Sbjct: 571  SAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIIL 630

Query: 277  NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            N     L  +  +D+A  + Q +         G+++          N  +F+I+I  LLK
Sbjct: 631  NG----LCKSNCVDEAIKMFQNL------CSKGLQL----------NIITFNIMIGALLK 670

Query: 337  DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             G+ + A+ LF  +   G +QNV  Y  +++ L     LEE   L   ME++G  P    
Sbjct: 671  GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 730

Query: 397  LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK-----ELCKHGKAM----- 446
            LN++ R L  R D+  A   + K+  +         ++LI      E   H K++     
Sbjct: 731  LNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR 790

Query: 447  ------------------EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                              +A+    +M+ +G  PD+V Y+  + GL    R   A EL+ 
Sbjct: 791  ILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 850

Query: 489  DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
             +       ++  YNII++GLCK+  V EA  +F  + +KGL  ++ T+N++I    K G
Sbjct: 851  SMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGG 910

Query: 549  NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
              + AM   +  +      PDV+TY  + + L   G  ++   L+  ME+ G   +    
Sbjct: 911  RKEDAMDLFA-AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLL 969

Query: 609  MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             AL+  L +      A  +   + EK    +      LIS F
Sbjct: 970  NALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLF 1011



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/607 (24%), Positives = 265/607 (43%), Gaps = 49/607 (8%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           L + A  +F Q+   G+  PN  +YNCL+           V   L+EM   G   +  T 
Sbjct: 253 LFDRAEAVFQQMIDNGV-KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTY 311

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C +G+  +A   F+ +I  G       + I+L  ++  G + +  +L+  M  
Sbjct: 312 GSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVA 371

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  N   F +    + K   +DKA+ +F+KM + G + DA  Y  +I  LCK  +++ 
Sbjct: 372 NGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMR 281
           A   +++M   G+TPD  + S L+       +   + +  +E  +  ++   +  N+I+ 
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILC 491

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L   G +          ++G+ + D  +E +      V P+  S++ +I+     G +D
Sbjct: 492 NLCKEGRV----------MEGQRLVD-SIECM-----GVRPDVISYNTLIDGHCLAGTID 535

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L   M  +G   + F YN L+ G C + R++ +Y   R+M  +G  P   T N++ 
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L + +    A  L   M   G +  +    +++  LCK     EA +   ++  +G  
Sbjct: 596 HGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQ 655

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            +I+ ++  IG L+   R + A++LF  I A+G   +VV Y +++  L +   + E + L
Sbjct: 656 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSL 715

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ M   G  P+    N L+      G+I +A   LS+ L++ + S +  T + LI    
Sbjct: 716 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK-LDERNFSVEASTTSMLISIFS 774

Query: 582 I----------------------------AGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                                        A R DDA  L+ EM  KG  P+ +T+  ++ 
Sbjct: 775 SDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 614 GLCKCDR 620
           GL +  R
Sbjct: 835 GLFQTGR 841



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 156/648 (24%), Positives = 277/648 (42%), Gaps = 51/648 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    S+G  +E   + +++   G   PN  +Y  LL  LCK+            M   
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAGG-PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G      T   +L  Y   G   +   + N ++ +G   + H+F+I   A++K G +DKA
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++  +M    +  +  ++  LI    K  RVD A   F++M   G   D  ++  ++ G
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNT 271
           LC   + E   +L+ EM   GI P+    + ++ +   EG   E   LV  I E   V  
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI-ECMGVRP 516

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  N+++      G+ID+A  LL+ M+       VG++          P++ S++ ++
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVS------VGLK----------PDSFSYNTLL 560

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G++D A S FR+M   G    V  YN ++ GL  + R  E+ EL   M  SG K
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
              +T N +   LC+   V  A+ + + +  +G +  +    ++I  L K G+  +A   
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              +   G + ++V Y   +  LI+   ++    LF  +  +G  P+    N ++  L  
Sbjct: 681 FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 740

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC-------------------------- 545
              ++ A    +++  +      +T ++LI+ +                           
Sbjct: 741 RGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL 800

Query: 546 --KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             K+  ID A      ML K   +PDV+TY T++ GL   GR  +A  L+  M       
Sbjct: 801 IKKARRIDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           N  T+  ++ GLCK +    A   F+ +  KG++ ++  F  +I A L
Sbjct: 860 NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL 907



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 211/473 (44%), Gaps = 22/473 (4%)

Query: 184 SRVDKALQLFDKMTKSGF---ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           S  +  + LF++M +  +   A +   Y ++IG  C+   LE     +  +  +G   D 
Sbjct: 70  SESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDH 129

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            ++++L+    D        K + E  DV    +     M   VS       YN+L   +
Sbjct: 130 IVINQLLNGLCDG-------KRVGEAMDVLLQRMPELGCMPDTVS-------YNILLKGL 175

Query: 301 KGEPIADVGVEMLMIFKG----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             E  A+  +E+L +       +  PN  S+  +IN    +G++D   +LF EM   G  
Sbjct: 176 CNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIP 235

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  Y  +IDGLC +   + +  + ++M ++G KP   T N +             + +
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + +M   G +P       L+  LCK+G+  EA  F   M+ +G  P +  Y   + G   
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYAT 355

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +    +L   + A+G  P+   +NI  S   K   + +A D+FN+M  +GL P   +
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  LI+  CK G +D A +  ++M+  E  +PD++ +++L+ GLC   + +    L+ EM
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMI-NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
              G  PN + F  ++  LCK  R          ++  G++PD+  +  LI  
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 15/198 (7%)

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKA----QRVAEAE---DLFNEMITKGLI---P 532
           AL+LF ++  H     VVA+N +++ + ++       +E+E    LFN M+    I   P
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI-M 591
           +  TY++LI  +C+ G+++        +L K     D I    L++GLC   R  +A+ +
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLIL-KTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM---KPDMFVFVALIS 648
           L   M E GC P+ +++  L+ GLC   R   AL    MM +  +    P++  +  +I+
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 649 AFLSELNPPLAFEVLKEM 666
            F +E      + +  EM
Sbjct: 212 GFFTEGQVDKPYNLFLEM 229


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 185/360 (51%), Gaps = 36/360 (10%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F I+IN L+K G L  A SL +E T  GC  ++  Y  ++D L  + +++E+  L+ ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             +G  PT  T N++   LC+   +  A++L+RK+   G  P V   T LI  L K  ++
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA++   +M   G   D VCY+A I GL+   ++  A  +++ + + GC PDVV  + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPS-------------------------------- 533
           I GLCKA R+  A  +F  M  +GL P+                                
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 534 ---VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
                TYN+LI+G CKSG++  A      MLE     PDV TY  LI G C AG  D A 
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGC-KPDVYTYNILISGFCKAGNTDAAC 299

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++++M    C+PN +T+  LI+GLCK  +   A ++++ MKE+G  PD FV+ +L+   
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 188/368 (51%), Gaps = 4/368 (1%)

Query: 272 MTLLCNSIMRILVSNG---SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           M +  +S+ +   +NG    I     ++  + K + I +    M  I     +P  ++++
Sbjct: 14  MLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYN 73

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++N L K G+L+ A+ L R++   GC  +V  Y +LIDGL    R  E+Y+L +EM   
Sbjct: 74  ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASR 133

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G         ++ R L +   +  A ++ + M  QG  P V   + +I  LCK G+   A
Sbjct: 134 GLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAA 193

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            R    M   G  P+ V YSA I GL   +++D ALE+   +    C PD + YNI+I G
Sbjct: 194 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 253

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK+  VA A   F+EM+  G  P V TYN+LI+G+CK+GN D A      M      SP
Sbjct: 254 LCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC-SP 312

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +V+TY TLI GLC   +   A + +  M+E+GC P+   + +L+ GLCK  +     + F
Sbjct: 313 NVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLF 372

Query: 629 RMMKEKGM 636
             M+  G+
Sbjct: 373 DEMERSGV 380



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 213/453 (47%), Gaps = 25/453 (5%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +LI+G VK   + +A  L  + T +G   D   Y  I+  L KNK+++ A+ L  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
             +G TP     + L+      G L   +                  ++R +V NG    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAI-----------------DLLRKIVDNGCTPD 103

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSP----NTSSFDIIINTLLKDGKLDLALSLF 347
                 ++I G        E   +FK   S     +T  +  +I  LL+ GK+  A S++
Sbjct: 104 VVT-YTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY 162

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           + MT  GC+ +V   + +IDGLC + R+  +  + + ME  G  P     +++   LC+ 
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           + +  AL ++ +M+     P      +LI  LCK G    A  F  +M++ G  PD+  Y
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G       D A  +F D+ +  C P+VV Y  +ISGLCK +++ +A   +  M  
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +G  P    Y+ L++G CKSG ++   +    M  + SG  +  T T LI  LC A R D
Sbjct: 343 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM--ERSGVANSQTRTRLIFHLCKANRVD 400

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +A+ L+N + ++G  P+   + ++I+ L K  +
Sbjct: 401 EAVSLFNAIRKEG-MPHPYAYNSIISALIKSGK 432



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 217/463 (46%), Gaps = 23/463 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            FSIL+    K G + +A  L +        ++  T+  ++    K  ++ +A+ L +K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
           T +G     A Y+ ++ GLCK  +LE A+ L  ++  +G TPD    + LI     +   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 255 -ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
            E   L KE+   R +   T+   +++R L+  G I QA ++ + M              
Sbjct: 121 FEAYKLFKEM-ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTS------------ 167

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G V P+  +   +I+ L K G++  A+ +F+ M   G   N  +Y+ LI GLC + 
Sbjct: 168 ---QGCV-PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +++ + E+L +M+++   P   T N +   LC+  DV  A     +M   G +P V    
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYN 283

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI   CK G    A     DM      P++V Y   I GL   +++  A   ++ +   
Sbjct: 284 ILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PD   Y+ ++ GLCK+ ++     LF+EM   G+  S  T   LI   CK+  +D+A
Sbjct: 344 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKANRVDEA 402

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            + L   + KE G P    Y ++I  L  +G+ ++   ++ EM
Sbjct: 403 -VSLFNAIRKE-GMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 199/458 (43%), Gaps = 30/458 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A  +     LAQ+   + C +       ++  L     ++EA  L +++   G C P
Sbjct: 9   LVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG-CTP 67

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN LL  LCK   ++     L+++ D G   D  T T L+       +  +A  +F
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G  +D   ++ L+    + G++ +A  + + M       +  T   +I G  K 
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
            R+  A+++F  M   G A +  +Y  +I GLCK ++++ AL++ ++MK +  TPD   +
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 241 EILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
            IL   +    D         E+ E     DV T  +L +   +     G+ D A  +  
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKA----GNTDAACGVFD 303

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M                     SPN  ++  +I+ L K  +L  A   ++ M + GC  
Sbjct: 304 DMSSSR----------------CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + F+Y++L+DGLC S +LE    L  EME SG   +      +F  LC+   V  A++L 
Sbjct: 348 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLF 406

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             +R +G      +N+ +I  L K GK  E      +M
Sbjct: 407 NAIRKEGMPHPYAYNS-IISALIKSGKVNEGQAVYQEM 443


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 274/596 (45%), Gaps = 25/596 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P +Y+Y  L++   ++   +L      ++   G   D    + LL+ +C + + D+AL +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 124 -FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHG 179
             +   + G V D   ++ILL +    G+  +A +L+  M +     +     +  +I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K+  V+KA  LF +M + G   D   Y  ++  LCK + ++ A     +M   G+ PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQ 297
               + LI   S  G+    V+   E R  + +   +  N++M  L   G I +A ++  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 298 AM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            M +KG+                 +P+  S+ I++N     G L     LF  M   G  
Sbjct: 351 TMAMKGQ-----------------NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +++ +N LI    N   L+++  +  EM + G KP   T  ++   LCR   +  A+  
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  QG  P       LI+  C HG  ++A   +++++  G   DIV + + I  L  
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           + RV  A  +F      G  PD V YN+++ G C   ++ +A  +F+ M++ G+ P+V  
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L+NG+CK G ID+ +     ML+K    P  I Y  +IDGL  AGR   A + ++EM
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 632

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            E G A N+ T+  ++ GL K      A+  F+ ++   +K D+     +I+    
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/642 (26%), Positives = 291/642 (45%), Gaps = 35/642 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V    + + LL+  C++   D  
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH-LLKGFCEAKRTDEA 167

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++   LL+  CN G+  +A  +   + + G V   D   ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M   G 
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----- 256
             D   Y+ +I G     Q + A++++ EM+   I PD   L+ L+ S    G++     
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 257 ---TLLVKEIWEDRDVNTMTLLCNS------------IMRILVSNGSIDQAYNLLQAMIK 301
              T+ +K   ++ DV + T++ N             +  +++ +G     Y     +IK
Sbjct: 348 VFDTMAMK--GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT-FNVLIK 404

Query: 302 GEPIADVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                 +  + ++IF       V P+  ++  +I  L + GK+D A+  F +M   G + 
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + + Y+ LI G C    L ++ EL+ E+  +G +       S+   LC+   V+ A N+ 
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
                 G  P      +L+   C  GK  +A R    MV  G  P++V Y   + G   I
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            R+D  L LFR++   G  P  + YNIII GL +A R   A+  F+EM   G+  +  TY
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 644

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++++ G  K+   D+A+  L + L   +   D+IT  T+I G+    R ++A  L+  + 
Sbjct: 645 SIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
             G  P  +T+  +IT L K      A   F  M+  G +PD
Sbjct: 704 RSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 183/364 (50%), Gaps = 9/364 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDG-----KLDLALSLFREMT-QIGCMQNVFLYNN 364
           E+ + F G +       D II + L  G     + D AL +    T ++GC+ +VF YN 
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 365 LIDGLCNSNRLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           L+  LCN  +  ++ +LLR M E G    P     N++     +  DV  A +L ++M  
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P +   + ++  LCK     +A  FL  MV +G LPD   Y+  I G     +   
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ +F+++      PDVVA N ++  LCK  ++ EA D+F+ M  KG  P V +Y +++N
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+   G +   M  L  ++  +  +PD+ T+  LI      G  D A++++NEM + G  
Sbjct: 370 GYATKGCLVD-MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+M +I  LC+  +   A+  F  M ++G+ PD + +  LI  F +  +   A E+
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 663 LKEM 666
           + E+
Sbjct: 489 ISEI 492



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 228/518 (44%), Gaps = 22/518 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    S G  +EA  +F +++R+ + +P+  + N L+ +LCK   +         M   
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSI-LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D ++ T +L  Y   G       +F+ ++  G   D + F++L+ A++  G +DKA
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 415

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +   M D  ++ +  T+  +I    +  ++D A++ F++M   G   D   Y  +I G
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNT 271
            C +  L  A +L SE+  +G+  D      +I +    G + +  + I++   +  ++ 
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV-MDAQNIFDLTVNVGLHP 534

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++ N +M      G +++A  +  AM+        G+E          PN   +  ++
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSA------GIE----------PNVVGYGTLV 578

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N   K G++D  LSLFREM Q G   +  LYN +IDGL  + R   +     EM ESG  
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
               T + + R L + +    A+ L +++R    +  +     +I  + +  +  EA   
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              + + G +P  V YS  I  L+    V+ A ++F  +   GC PD    N ++  L K
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
              +  A    +++  +       T  LL++ +   G 
Sbjct: 759 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 796



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 7/176 (3%)

Query: 482 LALELFRDICAHGCCPDVVA-----YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           LA+ LF    +    P V++     Y I++    +A R   A   F +++  GL      
Sbjct: 91  LAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAII 150

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            + L+ G+C++   D+A+  L     +    PDV +Y  L+  LC  G+   A  L   M
Sbjct: 151 ASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMM 210

Query: 597 EEKG--CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            E G  C+P+ + +  +I G  K      A   F+ M ++G+ PD+  + +++ A 
Sbjct: 211 AEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 263/549 (47%), Gaps = 35/549 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIID-----HGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           +++ Y  +   D+AL +F  + +      G    +     L+  +KW E +      E M
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  N +T+ +LI    +K + DKA +L + M + GF+ D   Y  +I  L KN  +
Sbjct: 144 ---GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTLLCN 277
             AL+L+ EM   G+TPD    + LI     +G++ L   EIWE       V       N
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI-LNASEIWERLLKGPSVYPNIPSYN 259

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KG 318
            ++  L   G  D+++ +   M K E   D+     +I                    + 
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            VSP+   ++ ++N  L+ G+++  L L++ M + GC + V  YN LI GL  + +++E+
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEA 378

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             +   + E        T   +   LC+   +  AL+++ +      +      + +I  
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LC+ G+  E    L  M + G  P+    +A I G +   +++ AL  F ++ + GC P 
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV YN +I+GL KA+R +EA  L  EM+ KG  P++ TY+LL+NG C+   +D A+    
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           + LEK    PDV  +  +I GLC +G+ +DA+ L++EM+++ C PN +T   L+ G  K 
Sbjct: 559 QALEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKV 617

Query: 619 -DRPRAALV 626
            D  RA+ +
Sbjct: 618 RDFERASKI 626



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 275/574 (47%), Gaps = 24/574 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I+      + ++A  +F ++     C P   SYN LL AL +S   D  E      +  
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+++ C   QFDKA  + N + + G+  D   +  L+ + +K G +  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIG 213
            +L + M +  +  +   + +LI GF KK  +  A ++++++ K      +   Y+V+I 
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVN 270
           GLCK  + + + +++  MK +    D    S LI      G L   T + KE+ E+  V+
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN-GVS 322

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              ++ N+++   +  G I++   L + M K       G   ++           S++I+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKE------GCRTVV-----------SYNIL 365

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I  L ++ K+D A+S++  + +  C  +   Y  L+ GLC +  L ++  +L E E    
Sbjct: 366 IRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRG 425

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
               F  +SM   LCR   +     ++ +M   G +P       +I    +  K  +A R
Sbjct: 426 DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  +MV +G  P +V Y+  I GL   +R   A  L +++   G  P+++ Y+++++GLC
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC 545

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           + +++  A +L+ + + KG  P V  +N++I+G C SG ++ A+   S M +++   P++
Sbjct: 546 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC-VPNL 604

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           +T+ TL++G       + A  +W+ + +   + N
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 161/333 (48%), Gaps = 2/333 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRLEESY 379
           +P + S   +I  L  +     ALS+F  +T+  G     +++++++  L +   +    
Sbjct: 4   APKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVS 63

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEPWVKHNTLLIKE 438
            ++  +     K       ++ +   +      AL++ ++M  + G +P ++    L+  
Sbjct: 64  RIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L +  K  EA  F       G  P++  Y+  I      K+ D A EL   +   G  PD
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           V +Y  +I+ L K   +++A  LF+EM  +G+ P VA YN+LI+G+ K G+I  A     
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           R+L+  S  P++ +Y  +I+GLC  G+ D++  +W+ M++     +  T+  LI GLC  
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                A   ++ M E G+ PD+ V+  +++ +L
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 243/516 (47%), Gaps = 58/516 (11%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKAC---ELIE 159
           L  LL   C +G+ +++L     ++  G+  + V  + L+  F     + KA    E++E
Sbjct: 65  LMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILE 124

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
              D ++     ++  +I GF K +++D A Q+FD+M   GF+ D   Y+++IG LC   
Sbjct: 125 TYGDPDVY----SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           +LE+A ++  E+   G  P     + LI       E T+L                    
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILI-------EATIL-------------------- 213

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                  G I++A  L   ++                +G + P+  +++ II  + K+G 
Sbjct: 214 ------EGRINEALELFDELVS---------------RG-LRPDLYTYNAIIRGICKEGM 251

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            D AL   R ++  GC  +V  YN L+    N +R E+   L+++M  SG +P   T + 
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    CR   V  A+N++  M+ +G  P       LI   CK G+   A  +L  MV +G
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            LPDIV Y+  +  L      DLAL++F  +   GC P V AYN + S L       +A 
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++ +EMI KG+ P   TYN LI+  C+ G +D+A+  L  M E     P VI++  ++ G
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM-EATRFQPTVISFNIVLLG 490

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           +C A R  + I L   M EKGC PN  +++ LI G+
Sbjct: 491 MCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 209/474 (44%), Gaps = 51/474 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     + KA+++ + +   G   D   Y+ +I G  K  Q++ A Q++  M+  G
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG 161

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD    + +I S                                 L S G ++ A+ +
Sbjct: 162 FSPDVVTYNIMIGS---------------------------------LCSRGKLELAFEV 188

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  ++K                    P+  ++ I+I   + +G+++ AL LF E+   G 
Sbjct: 189 MDELLKD----------------GCKPSVITYTILIEATILEGRINEALELFDELVSRGL 232

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +++ YN +I G+C     + + + +R +   G  P   + N + R    +        
Sbjct: 233 RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGER 292

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L++ M + G EP V  +++LI   C+ G+  EA   L  M ++G  PD   Y   I    
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+DLA+E    + + GC PD+V YN I++ LCK      A D+F ++   G  P+V 
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            YN + +     GN  +A+  +S M+ K    PD ITY +LI  LC  G  D+AI L  +
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRK-GIDPDEITYNSLISCLCRDGLVDEAIGLLVD 471

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           ME     P  I+F  ++ G+CK  R    +     M EKG  P+   +V LI  
Sbjct: 472 MEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEG 525



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 1/309 (0%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V+ YN +I G   +N+++ + ++   M   GF P   T N M   LC R  +  A  ++
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVM 189

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            ++   G +P V   T+LI+     G+  EA     ++V  G  PD+  Y+A I G+   
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              D AL+  R + A GC PDVV+YNI++       R  + E L  +M+  G  P+V T+
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++LI+ +C+ G + +A+  L  M EK   +PD  +Y  LI   C  GR D AI    +M 
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEK-GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
             GC P+ + +  ++  LCK      AL  F  + E G  P +  +  + SA  S  N  
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 658 LAFEVLKEM 666
            A E++ EM
Sbjct: 429 KALEMISEM 437



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 221/470 (47%), Gaps = 22/470 (4%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           L+ +   G+  D    T L++ + NS    KA+ V   +  +G  D + ++ ++  FSK 
Sbjct: 85  LESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKA 144

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            ++D A ++ +RM       +  T+ ++I     + +++ A ++ D++ K G       Y
Sbjct: 145 NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
            ++I       ++  AL+L+ E+   G+ PD    + +I     EG          EDR 
Sbjct: 205 TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEG---------MEDRA 255

Query: 269 VNTMTLLCNSIMRILVSNGSIDQ--AYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNT 324
           ++         +R L + G      +YN+L      +   + G  ++  M+  G   PN 
Sbjct: 256 LD--------FVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG-CEPNV 306

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +  I+I++  ++G++  A+++   M + G   + + Y+ LI   C   RL+ + E L +
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G  P     N++   LC+      AL++  K+   G  P V+    +   L   G 
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            ++A   +++M+++G  PD + Y++ I  L     VD A+ L  D+ A    P V+++NI
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNI 486

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           ++ G+CKA RV E  +L   M+ KG +P+  +Y LLI G   +G   +AM
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAM 536



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 2/302 (0%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++  C + +  ES   L  +   GFKP       + +     +++  A+ ++  +   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P V     +I    K  +   A +    M   GF PD+V Y+  IG L    +++LA 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           E+  ++   GC P V+ Y I+I       R+ EA +LF+E++++GL P + TYN +I G 
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G  D+A L   R L     +PDV++Y  L+       R +D   L  +M   GC PN
Sbjct: 247 CKEGMEDRA-LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T   LI+  C+  R R A+    +MKEKG+ PD + +  LISAF  E    LA E L+
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365

Query: 665 EM 666
           +M
Sbjct: 366 KM 367



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 19/414 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ YSYN ++    K+  +D        M+  G+  D  T   ++   C+ G+ + A  V
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E++  G     + ++IL+ A    G +++A EL + +    +R +  T+  +I G  K
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +   D+AL     ++  G   D   Y++++       + E   +L  +M  SG  P+   
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S LI+S   EG +   V   E+ +++ +   +   + ++      G +D A   L+ M+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
               + D+                 +++ I+ TL K G  DLAL +F ++ ++GC   V 
Sbjct: 369 SDGCLPDI----------------VNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN +   L +     ++ E++ EM   G  P   T NS+  CLCR   V  A+ L+  M
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                +P V    +++  +CK  +  E    L  MV++G LP+   Y   I G+
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 127/235 (54%), Gaps = 6/235 (2%)

Query: 423 QGHEPWV----KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           Q H P +     H   L+   C+ GK  E+  FL  +V +GF PD+V  +  I G  + +
Sbjct: 52  QPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSR 111

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +  A+ +   +  +G  PDV +YN +ISG  KA ++  A  +F+ M ++G  P V TYN
Sbjct: 112 NLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYN 170

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           ++I   C  G ++ A   +  +L K+   P VITYT LI+   + GR ++A+ L++E+  
Sbjct: 171 IMIGSLCSRGKLELAFEVMDELL-KDGCKPSVITYTILIEATILEGRINEALELFDELVS 229

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +G  P+  T+ A+I G+CK      AL   R +  +G  PD+  +  L+ +FL++
Sbjct: 230 RGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNK 284



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 2/224 (0%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +D+V S C  +      LI      G V EA  + + +K +GL  P++YSY+ L+ A 
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGL-TPDSYSYDPLISAF 351

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE- 135
           CK   +DL    L++M   G   D      +L   C  G  D AL VF ++ + G     
Sbjct: 352 CKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTV 411

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++ +  A    G   KA E+I  M    I  +E T+  LI    +   VD+A+ L   
Sbjct: 412 RAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVD 471

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           M  + F      +++++ G+CK  ++   ++L   M   G  P+
Sbjct: 472 MEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPN 515


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 262/550 (47%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+++F E+I    +   V FS    A ++  + +   +  ++++   I  N  T  ++
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F +  +   A  +  K+ K G+  D   ++ +I GL    ++  A+ L   M  +G 
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD                                  +  NSI+  +  +G    A +LL
Sbjct: 180 QPD---------------------------------VVTYNSIVNGICRSGDTSLALDLL 206

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M +    ADV                 ++  II++L +DG +D A+SLF+EM   G  
Sbjct: 207 RKMEERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN+L+ GLC + +  +   LL++M      P   T N +     +   +  A  L
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++M  +G  P +     L+   C   +  EA   L  MV+    PDIV +++ I G   
Sbjct: 311 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 370

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +KRVD  +++FR+I   G   + V Y+I++ G C++ ++  AE+LF EM++ G++P V T
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y +L++G C +G +++A+      L+K      ++ YTT+I+G+C  G+ +DA  L+  +
Sbjct: 431 YGILLDGLCDNGKLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             KG  PN +T+  +I+GLCK      A +  R M+E G  P+   +  LI A L + + 
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549

Query: 657 PLAFEVLKEM 666
             + ++++EM
Sbjct: 550 TASAKLIEEM 559



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 259/557 (46%), Gaps = 56/557 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF ++ R    +P+   ++    A+ ++   +LV    K+++  G  ++ YTL  
Sbjct: 60  DDAIALFQEMIR-SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 118

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  +C   +   A SV  +++  G+                 E D              
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGY-----------------EPDTT------------ 149

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI G   + +V +A+ L D+M ++G   D   Y+ I+ G+C++    +AL 
Sbjct: 150 -----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           L  +M+   +  D    S +I S   +G       L KE+ E + + +  +  NS++R L
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL 263

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G  +    LL+ M+  E                + PN  +F+++++  +K+GKL  A
Sbjct: 264 CKAGKWNDGALLLKDMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEA 307

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L++EM   G   N+  YN L+DG C  NRL E+  +L  M  +   P   T  S+ + 
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C  + V   + + R +  +G        ++L++  C+ GK   A     +MV  G LPD
Sbjct: 368 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 427

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ Y   + GL D  +++ ALE+F D+        +V Y  II G+CK  +V +A +LF 
Sbjct: 428 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 487

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  KG+ P+V TY ++I+G CK G++ +A + L +M E++  +P+  TY TLI      
Sbjct: 488 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTLIRAHLRD 546

Query: 584 GRPDDAIMLWNEMEEKG 600
           G    +  L  EM+  G
Sbjct: 547 GDLTASAKLIEEMKSCG 563



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 34/364 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K D A++LF+EM +   + ++  ++     +  + +     +  +++E +G     +T
Sbjct: 56  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           LN M  C CR      A +++ K+   G+EP       LIK L   GK  EA   +  MV
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  PD+V Y++ + G+       LAL+L R +       DV  Y+ II  LC+   + 
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------ 564
            A  LF EM TKG+  SV TYN L+ G CK+G  +   L L  M+ +E            
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 565 ----------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                                   SP++ITY TL+DG C+  R  +A  + + M    C+
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +TF +LI G C   R    +  FR + ++G+  +   +  L+  F       LA E+
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 663 LKEM 666
            +EM
Sbjct: 416 FQEM 419



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 239/525 (45%), Gaps = 31/525 (5%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD---QVKREGLCVPNNYSYNCL 72
            L Q++++SR    P  + F  R   ++   ++ N++ D   Q++  G+   N Y+ N +
Sbjct: 64  ALFQEMIRSRPL--PSLVDF-SRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIM 119

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG- 131
           +   C+ C        L ++   G+  D  T   L++     G+  +A+ + + ++++G 
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 132 WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
             D   ++ ++    + G+   A +L+ +M++ N++ +  T+  +I    +   +D A+ 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           LF +M   G  S    Y+ ++ GLCK  +      L  +M    I P+    + L+    
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 252 DEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
            EG+L     E++++   R ++   +  N++M        + +A N+L  M++ +   D+
Sbjct: 300 KEGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 309 ------------------GVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                             G+++   I K  +  N  ++ I++    + GK+ LA  LF+E
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G + +V  Y  L+DGLC++ +LE++ E+  ++++S          ++   +C+   
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  A NL   +  +G +P V   T++I  LCK G   EA   L  M ++G  P+   Y+ 
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            I   +    +  + +L  ++ + G   D  +  ++I  L  A +
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 160/673 (23%), Positives = 271/673 (40%), Gaps = 143/673 (21%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+ L   G V EA +L D++   G C P+  +YN ++  +C+S    L    L++M++ 
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 212

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG--------------------WVDE 135
               D +T + ++   C  G  D A+S+F E+   G                    W D 
Sbjct: 213 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 272

Query: 136 HV----------------FSILLVAFSKWGEVDKACELIERMDDCNI------------- 166
            +                F++LL  F K G++ +A EL + M    I             
Sbjct: 273 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 332

Query: 167 -----RLNEK-----------------TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                RL+E                  TF  LI G+    RVD  +++F  ++K G  ++
Sbjct: 333 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 392

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A  Y +++ G C++ ++++A +L+ EM   G+ PD      L+    D G+L   + EI+
Sbjct: 393 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL-EIF 451

Query: 265 EDRDVNTMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----K 317
           ED   + M L   +  +I+  +   G ++ A+NL  ++       +V    +MI     K
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 318 GTVS---------------PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           G++S               PN  +++ +I   L+DG L  +  L  EM   G   +    
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571

Query: 363 NNLIDGL-----------CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             +ID L           C S   +   +LL        + +  T   MF C      + 
Sbjct: 572 KMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPC----NTIT 627

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            +LN V  +  +G      ++  L ++L K  ++    +F    V+     +++ +    
Sbjct: 628 TSLN-VNTIEARGM-----NSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTW---- 677

Query: 472 GGLIDIK---RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR---VAEAEDLFNEM 525
            GL D +    VDL L             D V Y      + +  R   V  AE+L  EM
Sbjct: 678 -GLEDAECDLMVDLELP-----------TDAVHYAHRAGRMRRPGRKMTVVTAEELHKEM 725

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           I +G+ P+  TY+ LI+G+CK   +D+A   L  M+ K  G  D I Y  L+ GL    R
Sbjct: 726 IQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTK--GDSD-IRY--LLAGLMRKKR 780

Query: 586 PDDAIMLWNEMEE 598
                  W  + +
Sbjct: 781 KGSETEGWENLPD 793



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           VC+   +  G++DIK+ D A+ LF+++      P +V ++   S + + ++     D   
Sbjct: 44  VCFRERLRSGIVDIKKDD-AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 102

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           ++   G+  ++ T N++IN +C+      A   L +++ K    PD  T+ TLI GL + 
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLE 161

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+  +A++L + M E GC P+ +T+ +++ G+C+      AL   R M+E+ +K D+F +
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I +   +     A  + KEM
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEM 244


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 237/488 (48%), Gaps = 30/488 (6%)

Query: 100 DKYTLTPLLQVYCNSGQ--FDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE 156
           D YTLT L+  +C+S    F  A SV   +   G    HV FS LL   S   ++  A +
Sbjct: 9   DVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK 68

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           L + M       +  T+  +I+G  K      A+QL  KM + G   +  +Y  II  LC
Sbjct: 69  LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC 128

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMT 273
           K+K +  A++  SEM   GI+P+    S ++    + G   E T L K++ E R+V   T
Sbjct: 129 KDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE-RNVMPDT 187

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N ++  L   G I +A  + + MI+               KG V PN ++++ +++ 
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIE---------------KG-VEPNVNTYNALMDG 231

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
                ++D A  LF  M + GC  +V  YN LI G C S R++E+  LL EM      P 
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T +++ +  C+      A  L+ +MR  G  P +   ++++  LCK G   EAF  L 
Sbjct: 292 TVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLK 351

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M +    P+I  Y+  I G+ +  +++ A ELF ++   G  PDVV Y ++ISGL K  
Sbjct: 352 AMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGG 411

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG---SPDV 570
              EA +LF +M   G +P+  TYN++I G+ ++G+   A     R++E+  G   S D 
Sbjct: 412 LSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA----GRLIEEMVGRGFSADS 467

Query: 571 ITYTTLID 578
            T+  L D
Sbjct: 468 STFQMLSD 475



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 3/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++  IIN L K G   +A+ L ++M + GC  NV +Y+ +ID LC    + E+ E 
Sbjct: 80  PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEF 139

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM   G  P   T +S+    C       A +L ++M  +   P      +L+  L K
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK 199

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G  +EA      M+++G  P++  Y+A + G     ++D A +LF  +   GC P V +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YNI+I G CK+ R+ EA+ L  EM  K L P   TY+ L+ G+C+ G    A   L  M 
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM- 318

Query: 562 EKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            +  G  PD++TY+ ++DGLC  G  D+A  L   M+E    PN   +  LI G+C   +
Sbjct: 319 -RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             AA   F  +  KG++PD+  +  +IS  L       A E+ ++M
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 222/508 (43%), Gaps = 52/508 (10%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSR--VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           MD  NIR +  T  +LI+ F   +      A  +   M K G   +   +  ++ GL   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            ++  A++L+ EM   G  PD                             V T + + N 
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPD-----------------------------VITYSTIING 91

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           + ++    GS   A  LL+ M +               KG   PN   +  II++L KD 
Sbjct: 92  LCKM----GSTTMAIQLLKKMEE---------------KG-CKPNVVVYSTIIDSLCKDK 131

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  A+    EM   G   NV  Y++++ G CN  R  E+  L ++M E    P   T N
Sbjct: 132 LITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFN 191

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +   L +   ++ A  +   M  +G EP V     L+   C   +  EA +    MV++
Sbjct: 192 ILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P +  Y+  I G     R+D A  L  ++      PD V Y+ ++ G C+  R  +A
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L  EM + GL+P + TY+++++G CK G++D+A   L  M E +   P++  YT LI 
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI-EPNIFIYTILIQ 370

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G+C  G+ + A  L++ +  KG  P+ +T+  +I+GL K      A   FR M   G  P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   +  +I  FL   +   A  +++EM
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 187/392 (47%), Gaps = 20/392 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +G    A  L  +++ +G C PN   Y+ ++++LCK   +      L EM + 
Sbjct: 88  IINGLCKMGSTTMAIQLLKKMEEKG-CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T + +L  +CN G+ ++A S+F ++++   + + V F+IL+   SK G + +A
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M +  +  N  T+  L+ G+  +S++D+A +LF+ M + G A     Y+++I G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
            CK+ +++ A  L +EM    +TPD    S L+     +G      K + E R    +  
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326

Query: 274 LLCNSI-MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           L+  SI +  L   G +D+A+ LL+AM + +                + PN   + I+I 
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESK----------------IEPNIFIYTILIQ 370

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            +   GKL+ A  LF  +   G   +V  Y  +I GL       E+ EL R+M   G  P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
              T N + +   R  D   A  L+ +M  +G
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/682 (24%), Positives = 290/682 (42%), Gaps = 61/682 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG    A  + D++  +GL + +   YN L+   C++  VD     L  M++ G   +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPM-DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           T TP +  YC +   ++A  ++  ++ +G  +D    S L+    + G   +A  L   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD----------------- 204
           D      N  T+C LI    K  R  + L L  +M   G   D                 
Sbjct: 301 DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 205 ------------------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
                                Y V+I  LCK   ++ A Q+  EM+   I+P+    S +
Sbjct: 361 DEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 247 ITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL---- 296
           I      G      E   ++KE   + +V T   L +   +    + +++  +++L    
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 297 -------QAMIKGEPIADVGVEMLMIFKGTVSPNTS----SFDIIINTLLKDGKLDLALS 345
                   +++ G        E + +FK       S    ++  +I+ L K G +  A  
Sbjct: 481 EVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
             +E+     + +  +YN  I+ LC   + +E+  +L EM   G KP   T N+M    C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R+ +   AL L+ +M++   +P  + +NTL +  L   G   +A   L +MV  GF P  
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTL-VAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + +   +      +R+D+ L++   +   G   D+  YN ++  LC      +A  +  E
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P   T+N LI G CKS ++D A    ++ML +   SP++ T+ TL+ GL   G
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI-SPNIATFNTLLGGLESVG 778

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A  +  EME+ G  PN +T+  L+TG  K      A+  +  M  KG  P +  + 
Sbjct: 779 RIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYN 838

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           ALIS F        A E+ K+M
Sbjct: 839 ALISDFTKAGMMTQAKELFKDM 860



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 265/625 (42%), Gaps = 27/625 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN LL AL        V   L EM   G  +D  T+  LL   C +GQ D A ++
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            +       +D   ++ L+  + + G+   A  + +RM    + ++   +  L+ GF + 
Sbjct: 158 ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +VD A  + D M ++G   + A Y   I   C+ K +E A  LY  M  +G+  D   L
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           S L+     +G   E   L +E+ +   V      C +++  L   G   +  +LL  M+
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYC-TLIDSLAKAGRGKELLSLLGEMV 336

Query: 301 KGEPIAD-VGVEMLMIFKG------------------TVSPNTSSFDIIINTLLKDGKLD 341
               + D V    LM + G                   +S N  ++ ++I+ L K   +D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +  EM +     NV  ++++I+G      L+++ E  R M+E G  P   T  ++ 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
               + Q    AL +   M  +G E        L+  L ++GK  EA     D    G  
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            D V Y+  I GL     +  A +  +++      PD V YN+ I+ LC   +  EA+ +
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             EM   GL P  +TYN +I   C+ G   +A+  L  M +  S  P++ITY TL+ GL 
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMSSIKPNLITYNTLVAGLF 635

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  + A  L NEM   G +P+ +T   ++    +  R    L     M   G+  D+ 
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
           V+  L+           A  VL+EM
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 137/598 (22%), Positives = 253/598 (42%), Gaps = 57/598 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A R   L  L  ++V     M       L+  LG  G  +E          + L + 
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL- 377

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L++ALCK+ +VD  E  L EM++     +  T + ++  +   G  DKA + +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEY 436

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++    ++ +V  +  L+  F K+   D A E+   M    + +N+     L++G  +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496

Query: 183 KSRVDKALQLFDKMTKSGFA-----------------------------------SDAAM 207
             ++++A+ LF   + SG +                                    DA +
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V I  LC   + + A  + +EM+  G+ PD    + +I S   +GE    +K + E +
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +    +  N+++  L   G++++A  LL  M+                    SP++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA----------------GFSPSSL 660

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +   ++    +  +LD+ L +   M   G   ++ +YN L+  LC      ++  +L EM
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             SG  P   T N++    C+   +  A     +M  Q   P +     L+  L   G+ 
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   L +M + G  P+ + Y   + G         A+ L+ ++   G  P V  YN +
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           IS   KA  + +A++LF +M  +G+ P+  TY++L++GW +  N  +   CL  M EK
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEK 898



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 86/526 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G +EEA  LF      GL + ++ +Y  L++ L K+  +       +E+ D 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSL-DHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D       +   C  G+F +A S+  E+ + G   D+  ++ ++V+  + GE  KA
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M   +I+ N  T+  L+ G      V+KA  L ++M  +GF+  +  +  ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             ++++L++ L ++  M  +G+  D  +                                
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVY------------------------------- 697

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++++L  +G   +A  +L+ M+ G  IA               P+T +F+ +I   
Sbjct: 698 --NTLLQVLCYHGMTRKATVVLEEML-GSGIA---------------PDTITFNALILGH 739

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   LD A + + +M       N+  +N L+ GL +  R+ E+  +L EME+SG +P  
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN- 798

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
                               NL   + V GH               K    +EA R   +
Sbjct: 799 --------------------NLTYDILVTGHG--------------KQSNKVEAMRLYCE 824

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV +GF+P +  Y+A I        +  A ELF+D+   G  P    Y+I++SG  + + 
Sbjct: 825 MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             E +    +M  KG  PS  T + +   + K G   QA   L  +
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/572 (28%), Positives = 268/572 (46%), Gaps = 29/572 (5%)

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELI 158
           K  L  LL +Y      +K L VF +++  G + +  +   +L +   +   +D A E+ 
Sbjct: 131 KLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVY 190

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M +C I     T+  ++  F KK  V +ALQL  +M   G + +   Y+V++ GL  +
Sbjct: 191 NVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHS 250

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLL 275
            ++E A +L  +M   G+         LI    ++G++   + L +E+     V T+ + 
Sbjct: 251 GEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTV-VT 309

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            N+IM  L   G +  A  LL  M+                   + P+  S++ +I    
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNK----------------NLMPDLVSYNTLIYGYT 353

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G +  A  LF E+       +V  YN LIDGLC    L+ +  L  EM + G  P  F
Sbjct: 354 RLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVF 413

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTD 454
           T  +  R  C+  ++  A  L  +M  +G +P    + T ++ EL K G   +AF    +
Sbjct: 414 TFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEE 472

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+  GF PD++ Y+  I GL  +  +  A EL + +  +G  PD V Y  II     A  
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A  LF EM++KG+ PSV TY +LI+ +   G +  A+L    M EK    P+VITY 
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK-GVHPNVITYN 591

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI+GLC   + D A   + EM+ KG +PN+ T+  LI   C     + AL  ++ M ++
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 651

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++PD     +L    L  LN      V++ +
Sbjct: 652 EIQPDSCTHRSL----LKHLNKDYKLHVVRHL 679



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 195/390 (50%), Gaps = 5/390 (1%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS-SFDIIINTLLKD 337
           I+ IL  NG +  AY +++ ++  +   + GV  ++       P+     D+++   +K 
Sbjct: 87  ILDILARNGLMRSAYCVMEKVVSVK--MENGVIDVVSSSEVSMPSVKLILDLLLWIYVKK 144

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN-SNRLEESYELLREMEESGFKPTHFT 396
             L+  L +F +M   G + +V   N ++  L +  N ++ + E+   M E G  PT  T
Sbjct: 145 SLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVT 204

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N+M    C++  V  AL L+ +M+  G  P      +L+  L   G+  +A   + DM+
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G    +  Y   I G  +  +++ A  L  ++ + G  P VV YN I+ GLCK  RV+
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A  L + M+ K L+P + +YN LI G+ + GNI +A L  +  L   S +P V+TY TL
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE-LRYRSLAPSVVTYNTL 383

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC  G  D A+ L +EM + G  P+  TF   + G CK      A   F  M  +G+
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +PD F ++  I   L   +P  AF + +EM
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEM 473



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 218/485 (44%), Gaps = 24/485 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+V+EA  L  Q++  G C PN+ +YN L+  L  S  ++  +  +++M   G     YT
Sbjct: 216 GMVQEALQLLFQMQAMG-CSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYT 274

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
             PL++ YC  GQ ++A  +  E++  G V   V ++ ++    KWG V  A +L++ M 
Sbjct: 275 YDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMV 334

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           + N+  +  ++  LI+G+ +   + +A  LF ++     A     Y+ +I GLC+   L+
Sbjct: 335 NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLD 394

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           +A++L  EM   G  PD    +  +      G L +  KE++++                
Sbjct: 395 VAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM-AKELFDE---------------- 437

Query: 283 LVSNGSIDQAYNLLQAMIK----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +++ G     +  +  ++     G+P    G++  M+ +G   P+  ++++ I+ L K G
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNVFIDGLHKLG 496

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A  L ++M   G + +   Y ++I     +  L ++  L  EM   G  P+  T  
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +      R  +  A+    +M  +G  P V     LI  LCK  K  +A+ F  +M  +
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+   Y+  I    ++     AL L++D+      PD   +  ++  L K  ++   
Sbjct: 617 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV 676

Query: 519 EDLFN 523
             L N
Sbjct: 677 RHLEN 681


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 280/606 (46%), Gaps = 48/606 (7%)

Query: 1   MASILSRARRIAP-----LRVLAQ------DVVKS------RCFMSPGALGFLIRCLGSV 43
           M  IL R+RR+       LR++ +      ++V+S       C  +P     L+R     
Sbjct: 138 MIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQA 197

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
             + E    F  +K +GLCV  N + N LL  L K   VDL     +E+   G   + YT
Sbjct: 198 RKLREGCEAFRVLKSKGLCVSIN-ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 256

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           L  ++   C + + +   S  +++ + G + D   ++ L+ A+ + G +++A EL++ M 
Sbjct: 257 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 316

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++    T+  +I+G  K  +  +A  + D+M K G + D A Y++++   C+N  + 
Sbjct: 317 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 376

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-NSIMR 281
            A +++ EM   G+ PD    S LI   S  G L   +K     RD+    L   N I  
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF---RDMKNAGLAPDNVIYT 433

Query: 282 ILVS----NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG------------------- 318
           IL+     NG + +A  +   M++   + DV V    I  G                   
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDV-VTYNTILNGLCKEKMLSEADELFTEMTE 492

Query: 319 -TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             V P+  +F  +IN   KDG ++ A++LF  M Q     +V  YN LIDG C  + +E+
Sbjct: 493 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
             EL  +M      P H +   +    C    V  A  L  +M  +G E  +     ++K
Sbjct: 553 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 612

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C+ G A++A  FL++M+ +G +PD + Y+  I G I  + +D A  L   +   G  P
Sbjct: 613 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 672

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DV+ YN+I++G  +  R+ EAE +  +MI +G+ P  +TY  LING     N+ +A    
Sbjct: 673 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732

Query: 558 SRMLEK 563
             ML++
Sbjct: 733 DEMLQR 738



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 259/555 (46%), Gaps = 30/555 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+  + +  ++ + CE    +    + ++      L+ G VK   VD A +++ ++
Sbjct: 186 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 245

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG   +    +++I  LCKN+++E      S+M+  G+ PD    + LI +   +G  
Sbjct: 246 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG-- 303

Query: 257 TLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             L++E +E       + +       N+I+  L   G   +A  +L  M+K     D   
Sbjct: 304 --LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361

Query: 311 EMLMIFK-------------------GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             +++ +                     V P+  SF  +I  L K+G LD AL  FR+M 
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +  +Y  LI G C +  + E+ ++  EM E G      T N++   LC+ + + 
Sbjct: 422 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 481

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L  +M  +G  P     T LI    K G   +A      M+Q    PD+V Y+  I
Sbjct: 482 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 541

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      ++   EL+ D+ +    P+ ++Y I+I+G C    V+EA  L++EM+ KG  
Sbjct: 542 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 601

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            ++ T N ++ G+C++GN  +A   LS ML K    PD ITY TLI+G       D A  
Sbjct: 602 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFA 660

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L N+ME  G  P+ IT+  ++ G  +  R + A +    M E+G+ PD   + +LI+  +
Sbjct: 661 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 720

Query: 652 SELNPPLAFEVLKEM 666
           ++ N   AF V  EM
Sbjct: 721 TQNNLKEAFRVHDEM 735



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 230/534 (43%), Gaps = 53/534 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L + ++I   +    D+ +   F        LI      GL+EEA  L D +  +G
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L  P  ++YN ++  LCK+      +  L EM   G   D  T   LL   C +     A
Sbjct: 320 L-KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+E+   G V + V FS L+   SK G +D+A +    M +  +  +   + +LI G
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 438

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   + +AL++ D+M + G   D   Y+ I+ GLCK K L  A +L++EM   G+ PD
Sbjct: 439 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 498

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           F   + LI   S +                                 G++++A  L + M
Sbjct: 499 FYTFTTLINGYSKD---------------------------------GNMNKAVTLFEMM 525

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+                  + P+  +++ +I+   K  +++    L+ +M       N 
Sbjct: 526 IQR----------------NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 569

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LI+G CN   + E++ L  EM E GF+ T  T N++ +  CR  + V A   +  
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629

Query: 420 MRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M ++G  P  + +NTL I    K      AF  +  M   G LPD++ Y+  + G     
Sbjct: 630 MLLKGIVPDGITYNTL-INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 688

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           R+  A  +   +   G  PD   Y  +I+G      + EA  + +EM+ +G +P
Sbjct: 689 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 227/474 (47%), Gaps = 35/474 (7%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           MD      N  TF  L++GF K+ R     +L + M   G   +   Y+ ++ GLCK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 221 LEMALQLYSEM--KGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLL 275
              A +L  +M  +G   TPD    S L++     G   E   L+KE+   R +    L+
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVI-SRGLRPDALM 119

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
              +M  L  +  + +A  LL+ MI+                    P   +F+ +I+   
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRA----------------GCCPTLITFNTLISGCC 163

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           ++  L++A SL + M   G   +V  YN L+DGLC + RL+E+ +LL  M+ SG  P   
Sbjct: 164 REKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             +S    LC+   V+ A  ++ +MR   H+P V     ++  LCK GK   A   +  M
Sbjct: 224 AYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283

Query: 456 VQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
              +G   ++V YS  + GL  + R   A  +   +   GC PDVV Y+ +++GLCKA +
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK--------ESG 566
           + EA +   EM  +G  P+  TY  L++G C  G + +A     RM+E+        +  
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA----ERMVEEMSSGGGGGDHC 399

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            P V TY  LI GLC AGR DDA+  +  M  +GC P+ +++  ++ GL +  R
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 4/348 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN+ +F+ ++N   K G+      L   M   G   NV  YN L++GLC   R  E+ EL
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 382 LREMEESGFK--PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +R+M   G +  P   T +++    C+   V  +  L++++  +G  P     T ++  L
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  EA   L +M++ G  P ++ ++  I G    K +++A  L + + A G   DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN ++ GLCKA R+ EAE L   M   G  P V  Y+  + G CKSG +  A   L +
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK-GCAPNRITFMALITGLCKC 618
           M + +   P+V+TY T++DGLC +G+ D A+ +  +M    GC  N + +  ++ GLCK 
Sbjct: 248 MRDSDH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R + A      M   G +PD+  + +L++          A E ++EM
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 167/335 (49%), Gaps = 2/335 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG--CMQNVFLYNNLIDGLCNSNRLEE 377
           + PN  S++ ++  L K  +   A  L R+M   G     ++  Y+ L+ G C + ++EE
Sbjct: 41  IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEE 100

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           S ELL+E+   G +P       +   LC+   +  AL L+ +M   G  P +     LI 
Sbjct: 101 SRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLIS 160

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C+      A   L  M   G   D+V Y+  + GL    R+  A +L   + A GC P
Sbjct: 161 GCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DVVAY+  + GLCK+ +V  A  +  +M      P+V TYN +++G CKSG ID A+  +
Sbjct: 221 DVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMM 280

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M   +    +V+ Y+T++DGLC  GR  +A  +   M   GC P+ +T+ +L+ GLCK
Sbjct: 281 EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             +   A+   R M  +G KP+   + +L+    S
Sbjct: 341 AGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCS 375



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 221/468 (47%), Gaps = 27/468 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN+ ++N L+    K       E  L+ M   G   +  +   LL+  C   ++ +A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 122 SVFNEIIDHGW---VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            +  ++I  G     D   +S LL  + K G+V+++ EL++ +    +R +   +  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K +R+ +AL+L ++M ++G       ++ +I G C+ K LEMA  L   M  SG+  
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 239 DFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    + L+      G L    +  E  +        +  +S +  L  +G +  A+ +L
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGC 355
           + M   +                  PN  +++ I++ L K GK+D AL +  +M +  GC
Sbjct: 246 EQMRDSDH----------------DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGC 289

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV  Y+ ++DGLC   R +E+  ++  M  +G +P   T +S+   LC+   +  A+ 
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL-----PDIVCYSAA 470
            VR+M ++G +P       L+  LC  G+  EA R + +M   G       P +  Y+A 
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNAL 409

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           IGGL    R+D AL+ F+ + + GC PD V+Y+ I+ GL ++ R  +A
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 188/440 (42%), Gaps = 54/440 (12%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E   ++ D + R G   P+  +Y+ LL   CK+  V+     LKE+   G   D    T 
Sbjct: 63  EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++   C S +  +AL +  E+I  G     + F+ L+    +   ++ A  L++ M    
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           ++ +  T+  L+ G  K  R+ +A QL ++M  SG A D   Y   + GLCK+ ++  A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           Q+  +M+ S                               D D N +T   N+I+  L  
Sbjct: 243 QVLEQMRDS-------------------------------DHDPNVVTY--NTILDGLCK 269

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +G ID A  +++ M   +                   N   +  +++ L K G+   A S
Sbjct: 270 SGKIDTALEMMEQMASSD---------------GCGLNVVGYSTVVDGLCKLGRTQEARS 314

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +   M + GC  +V  Y++L++GLC + ++EE+ E +REM   G KP   T  S+   LC
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374

Query: 406 RRQDVVGALNLVRKMRVQGH-----EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               +  A  +V +M   G       P V     LI  LCK G+  +A +F   M  +G 
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434

Query: 461 LPDIVCYSAAIGGLIDIKRV 480
            PD V YS  + GL    R 
Sbjct: 435 DPDGVSYSTIVEGLARSGRA 454



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 5/285 (1%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M+ +G  P   T N++     ++        L+  M  +G +P V     L++ LCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 445 AMEAFRFLTDMVQEG--FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
             EA   + DM+  G    PD+V YS  + G     +V+ + EL +++ + G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +++ LCK+ R+ EA +L  EMI  G  P++ T+N LI+G C+  N++ A   L  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM-- 178

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             SG   DV+TY TL+DGLC AGR  +A  L   M+  GCAP+ + + + + GLCK  + 
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A      M++    P++  +  ++           A E++++M
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 264/561 (47%), Gaps = 33/561 (5%)

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           K  L   +  Y  SGQ   A  +F ++    +    +  +     LV +     V  + E
Sbjct: 135 KALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE 194

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                    I  N  TF ++I+G+  +++   A++  + M K   + D   Y+ I+  LC
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALC 254

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR---DVN 270
           K  +L  A  L  +MK  G+ P+    + L+      G   E   +++ + ++    DV 
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +L N     L + G I++A+ L   M           E L +      P+  S++ +
Sbjct: 315 TYNMLING----LCNEGRIEEAFKLRDEM-----------ENLKLL-----PDVVSYNTL 354

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN  L+  K+  A  L  EM++ G   N   +N ++   C   +++++   + +MEESGF
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            P   T N++    C+  ++  A   + +M R       V  NT+L + LC+  K  EA+
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL-RTLCREKKLEEAY 473

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L+   + G+  D V Y   I G      VD AL+L+ ++      P  V YN II GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+  +  +A    NE++  GL+P   TYN +++G+C+ G++++A    ++M+E  S  PD
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPD 592

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V T   L+ GLC+ G  + A+ L+N    KG A + +T+  LIT LCK  R   A     
Sbjct: 593 VFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 630 MMKEKGMKPDMFVFVALISAF 650
            M+EK + PD + + A+I+A 
Sbjct: 653 EMEEKELGPDHYTYNAIITAL 673



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 264/560 (47%), Gaps = 34/560 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+N +YN +L+ALCK   +      L +M+  G   ++ T   L+  YC  G   +A 
Sbjct: 239 CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +V   +  +  + D   +++L+      G +++A +L + M++  +  +  ++  LI+G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           ++ S++ +A +L ++M++ G   +A  +++++   CK  +++ A    ++M+ SG +PD 
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ- 297
              + LI      G +    + + E   +++   ++  N+I+R L     +++AY LL  
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           A  +G  I +V                 S+  +I    KDG +D AL L+ EM +   + 
Sbjct: 479 ARKRGYFIDEV-----------------SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   YN +I GLC   + E++   L E+ ESG  P   T N++    CR  DV  A    
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM     +P V    +L++ LC  G   +A +     V +G   D V Y+  I  L   
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            R+D A  L  ++      PD   YN II+ L  + R+ EAE+  ++M+ KG +P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL- 700

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                       +D     ++    +ES S  V  Y+  I  LC  G+  DA+ ++ E +
Sbjct: 701 -----------QLDXNETVVTSETSEESDSSSV-AYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 598 EKGCAPNRITFMALITGLCK 617
           +KG   ++ T++ L+ GL K
Sbjct: 749 QKGITVDKSTYINLMDGLIK 768



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 168/670 (25%), Positives = 278/670 (41%), Gaps = 113/670 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD---YGWGYD 100
           G    A  +F ++KR  L  PN  + N LL +L +  S   V    +   D    G   +
Sbjct: 149 GQPHHAFQIFKKMKRLRL-RPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   ++  YC   +F  A+   N +  +    ++V ++ +L A  K G +  A +L+ 
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM 267

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  N  T+ +L++G+ K   + +A  + + MT++    D   Y+++I GLC   
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A +L  EM+   + PD    + LI  C +           W               
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE-----------W--------------- 361

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                    I +A+ LL+ M +               KG V PN  + +I++    K+GK
Sbjct: 362 -------SKISEAFKLLEEMSE---------------KG-VKPNAVTHNIMVKWYCKEGK 398

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A +   +M + G   +   YN LI+G C +  + E++  + EM     K    TLN+
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLI--------------------KE 438
           + R LCR + +  A  L+   R +G+    V + TL++                    KE
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 439 --------------LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                         LC+ GK  +A   L ++++ G LPD   Y+  + G      V+ A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +    +  +   PDV   NI++ GLC    + +A  LFN  ++KG      TYN LI   
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +D A   LS M EKE G PD  TY  +I  L  +GR  +A    ++M EKG  P 
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELG-PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697

Query: 605 RI-----------------------TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           ++                        +   I  LC   + + A+  F   K+KG+  D  
Sbjct: 698 QVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 642 VFVALISAFL 651
            ++ L+   +
Sbjct: 758 TYINLMDGLI 767



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 35/252 (13%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R +++     L     K   F+   + G LI      G V+ A  L+D++K + + +P
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI-IP 521

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YNC++  LC+    +    +L E+ + G   D+ T   +L  YC  G  +KA    
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           N+++++ +  + VF+                        CNI         L+ G   + 
Sbjct: 582 NKMVENSFKPD-VFT------------------------CNI---------LLRGLCMEG 607

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++KAL+LF+     G A D   Y+ +I  LCK  +L+ A  L SEM+   + PD    +
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667

Query: 245 KLITSCSDEGEL 256
            +IT+ +D G +
Sbjct: 668 AIITALTDSGRI 679


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 173/682 (25%), Positives = 290/682 (42%), Gaps = 61/682 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG    A  + D++  +GL + +   YN L+   C++  VD     L  M++ G   +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPM-DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           T TP +  YC +   ++A  ++  ++ +G  +D    S L+    + G   +A  L   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD----------------- 204
           D      N  T+C LI    K  R  + L L  +M   G   D                 
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 205 ------------------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
                                Y V+I  LCK   ++ A Q+  EM+   I+P+    S +
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 247 ITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           I      G      E   ++KE   + +V T   L +   +    + +++  +++L   +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 301 K-GEPIADVGV----------EMLMIFKGTVSPNTS----SFDIIINTLLKDGKLDLALS 345
           K  + I D  V          E + +FK       S    ++  +I+ L K G +  A  
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
             +E+     + +  +YN  I+ LC   + +E+   L EM   G KP   T N+M    C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R+ +   AL L+ +M++   +P  + +NTL +  L   G   +A   L +MV  GF P  
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTL-VAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + +   +      +R+D+ L++   +   G   D+  YN ++  LC      +A  +  E
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P   T+N LI G CKS ++D A    ++ML +   SP++ T+ TL+ GL   G
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI-SPNIATFNTLLGGLESVG 778

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A  +  EME+ G  PN +T+  L TG  K      A+  +  M  KG  P +  + 
Sbjct: 779 RIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYN 838

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           ALIS F        A E+ K+M
Sbjct: 839 ALISDFTKAGMMTQAKELFKDM 860



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 266/629 (42%), Gaps = 35/629 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN LL AL        V   L EM   G  +D  T+  LL   C +GQ D A ++
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            +       +D   ++ L+  + + G+   A  + +RM    + ++   +  L+ GF + 
Sbjct: 158 ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +VD A  + D M ++G   + A Y   I   C+ K +E A  LY  M  +G+  D   L
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           S L+     +G   E   L +E+ +          C +++  L   G   +  +LL  M+
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC-TLIDSLAKAGRGKELLSLLGEMV 336

Query: 301 KGEPIAD-VGVEMLMIFKG------------------TVSPNTSSFDIIINTLLKDGKLD 341
               + D V    LM + G                   +SPN  ++ ++I+ L K   +D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +  EM +     NV  ++++I+G      L+++ E  R M+E G  P   T  ++ 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC----KHGKAMEAFRFLTDMVQ 457
               + Q    AL +   M  +G    VK N  ++  L     ++GK  EA     D   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEG----VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G   D V Y+  I GL     +  A +  +++      PD V YN+ I+ LC   +  E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+    EM   GL P  +TYN +I   C+ G   +A+  L  M +  S  P++ITY TL+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMSSIKPNLITYNTLV 631

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GL   G  + A  L NEM   G +P+ +T   ++    +  R    L     M   G+ 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
            D+ V+  L+           A  VL+EM
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/580 (23%), Positives = 248/580 (42%), Gaps = 59/580 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A R   L  L  ++V     M       L+  LG  G  +E          + L  P
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS-P 377

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L++ALCK+ +VD  E  L EM++     +  T + ++  +   G  DKA + +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEY 436

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++    ++ +V  +  L+  F K+   D A E+   M    +++N+     L++G  +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 183 KSRVDKALQLFDKMTKSGFA-----------------------------------SDAAM 207
             ++++A+ LF   + SG +                                    DA +
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V I  LC   + + A    +EM+  G+ PD    + +I S   +GE    +K + E +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +    +  N+++  L   G++++A  LL  M+                    SP++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA----------------GFSPSSL 660

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +   ++    +  +LD+ L +   M   G   ++ +YN L+  LC      ++  +L EM
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             SG  P   T N++    C+   +  A     +M  Q   P +     L+  L   G+ 
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSA-AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            EA   L +M + G  P+ + Y   A G      +V+ A+ L+ ++   G  P V  YN 
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNA 839

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +IS   KA  + +A++LF +M  +G+ P+  TY++L++GW
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 192/445 (43%), Gaps = 51/445 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G +EEA  LF      GL + ++ +Y  L++ L K+  +       +E+ D 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSL-DHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D       +   C  G+F +A S   E+ + G   D+  ++ ++V+  + GE  KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M   +I+ N  T+  L+ G      V+KA  L ++M  +GF+  +  +  ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             ++++L++ L ++  M  +G+  D  +                                
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVY------------------------------- 697

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++++L  +G   +A  +L+ M+ G  IA               P+T +F+ +I   
Sbjct: 698 --NTLLQVLCYHGMTRKATVVLEEML-GSGIA---------------PDTITFNALILGH 739

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   LD A + + +M       N+  +N L+ GL +  R+ E+  +L EME+SG +P +
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T + +     ++ + V A+ L  +M  +G  P V     LI +  K G   +A     D
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKR 479
           M + G  P    Y   + G  D+ R
Sbjct: 860 MQKRGVHPTSCTYDILVSGWYDLAR 884


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 174/672 (25%), Positives = 297/672 (44%), Gaps = 78/672 (11%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YNCLL+ L +   +       ++M   G   + +T   L+Q  C     D+A+  F E
Sbjct: 130 FTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGE 189

Query: 127 IIDHGWVDEHVF----SILLVAFSKWGEVDKA-CELIERMDDCNIRLNEKTFCVLIHGFV 181
           ++D G+          +  L A  K GE  +     +E+     + L +     L+  FV
Sbjct: 190 MVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKK----ALLVNFV 245

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM---------- 231
            + +  +A +LF  M KSG   DA +Y  ++   CK + L+ A +L+ EM          
Sbjct: 246 IQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN 305

Query: 232 -----------KGSGITPDFEILSKLITSCSDEGEL-TLLVKEIWED------------- 266
                      K   I   FE    +  S S    +  +L++ + E              
Sbjct: 306 VAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEI 365

Query: 267 --RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI--------- 315
             R++   +  C+S+++ L   G +D A +LL+ MIK     D+    ++I         
Sbjct: 366 AGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKI 425

Query: 316 ------FKG------TVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLY 362
                  +G      + S +  S++ ++N+L K  K+  A ++F  M ++   + +V  Y
Sbjct: 426 QEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + LIDG C  + L  + +L ++M +    P   T N+    L R+  +  A  +  +M  
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P V   + LI       K  +A      M+  G  P+ V Y+  + GL    + D 
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A ELFR +   GC PD V Y  ++ G C   ++ +A ++F+EM++KG  P V  YN L+ 
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 665

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE-KGC 601
           G+ ++G   +A      M+ ++   PD +++  +IDGL  A R DDA+ ++  ME+  GC
Sbjct: 666 GFFRAGKPGEAKQLFQVMVSRQC-KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA--------FLSE 653
           +P+ +T+ +LI GLC   R   A+  F+ +    + PD   F  L+ A        F   
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIR 784

Query: 654 LNPPLAFEVLKE 665
              P AF VL E
Sbjct: 785 FKDPPAFNVLME 796



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 297/636 (46%), Gaps = 41/636 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG-----YD 100
           +++A  +F+++  +G+ VPN ++Y  L+++ C   + D       EM D G+      Y 
Sbjct: 145 LKQAGQVFEKMVAQGV-VPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQ 203

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS-ILLVAFSKWGEVDKACELIE 159
           K  +T  L+     G+F +   VF   ++     E +    LLV F    +  +A +L  
Sbjct: 204 K--VTECLKATGKEGEFSR---VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFR 258

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS-DAAMYDVIIGGLCKN 218
            M     + +   +  ++    K   +D+A +LF +M     A  +   +   + GLCK+
Sbjct: 259 AMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKS 318

Query: 219 KQLEMALQLYSEMKGS--GITPDFEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTL 274
            ++E A +    M+ S     P +++L +L+      D+ E   L  EI   R++   + 
Sbjct: 319 GKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL--EI-AGRNIQPSSG 375

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
            C+S+++ L   G +D A +LL+ MIK               +G   P+ ++  ++IN L
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIK---------------RGYC-PDMATHSMLINEL 419

Query: 335 LKDGKLDLALSLFREMTQ--IGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-EESGFK 391
            K  K+  A    + M +       + F YN+L++ LC + ++ +++ +   M  E  F 
Sbjct: 420 CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + + +    C+  ++  A  L ++M      P V      +  L + G+  +A   
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             +MV  G  PD++ YS  I G    ++ D A ELF  + + GC P+ V YN ++ GLCK
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +  EA +LF +M+ +G  P   TY  L+ G+C  G I+QA+     M+ K    PDV+
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK-GHDPDVV 658

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF-RM 630
            Y  L+ G   AG+P +A  L+  M  + C P+ ++   +I GL K  R   A+  F RM
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++ G  PD+  + +LI     E     A +V KE+
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 250/528 (47%), Gaps = 29/528 (5%)

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N + +  T+  L+   ++   + +A Q+F+KM   G   +   Y V++   C  +  + A
Sbjct: 124 NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEA 183

Query: 225 LQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           ++ + EM   G  P    ++ +++ + +   EGE + +     E R    M L    ++ 
Sbjct: 184 VRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVN 243

Query: 282 ILVSNGSIDQAYNLLQAMIKG--EPIADVGVEML------------------MIFKGTVS 321
            ++ + +I +A  L +AM+K   +P A +   M+                  M  +    
Sbjct: 244 FVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAP 302

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N  ++   ++ L K GK++ A    R M Q     +  +Y+ LI  L  S R++++ E 
Sbjct: 303 LNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEA 361

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             E+     +P+  T +S+ + LC+   V  AL+L+  M  +G+ P +  +++LI ELCK
Sbjct: 362 CLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCK 421

Query: 442 HGKAMEAFRFLTDMVQE--GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPD 498
             K  EA  FL  M ++          Y++ +  L   K+V  A  +F  + +     PD
Sbjct: 422 ADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPD 481

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV+Y+I+I G CK   +  AE L+ +MI    +P+V TYN  +NG  + G I  A     
Sbjct: 482 VVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYE 541

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M+     SPDVITY+TLI G  +A + D A  L+  M  +GC PN +T+  L+ GLCK 
Sbjct: 542 EMVAA-GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKE 600

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +P  A   FR M E+G  PD   +  L+  F +      A EV  EM
Sbjct: 601 SKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEM 648



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 156/614 (25%), Positives = 272/614 (44%), Gaps = 83/614 (13%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-----LVEMRLKE---MQDYGWGY 99
           EA+ LF  + + G C P+   Y+ ++ A CK  ++D      +EM ++    + +  W  
Sbjct: 252 EASKLFRAMVKSG-CKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW-- 308

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
                T  L   C SG+ ++A      + +     + V+ +L+    + G +DKA E   
Sbjct: 309 -----TAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL 363

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +   NI+ +  T   +I    K  RVD AL L + M K G+  D A + ++I  LCK  
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--- 276
           +++ A +    M                                  DR +++ +  C   
Sbjct: 424 KIQEAQEFLQGM----------------------------------DRKISSRSSSCFSY 449

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           NS++  L     + QA+ +   M+                + +  P+  S+ I+I+   K
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVS---------------ERSFVPDVVSYSILIDGFCK 494

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             +L  A  L+++M  + C+ NV  YN  ++GL    R+ ++  +  EM  +G  P   T
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554

Query: 397 LNSMFR--CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            +++     L R+ D   A  L   M  +G  P       L+  LCK  K  EA      
Sbjct: 555 YSTLIHGFSLARKHD--QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+ G  PD V Y+  + G  ++ +++ A+E+F ++ + G  PDVVAYN ++ G  +A +
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA+ LF  M+++   P   ++N++I+G  K+  +D A+    RM +    SPD++TY 
Sbjct: 673 PGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 732

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC----------DRPRAA 624
           +LI GLC   R  +A+ ++ E++    +P+   F  L+  + KC            P A 
Sbjct: 733 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI-KCGIVYQFEIRFKDPPAF 791

Query: 625 LVHFRMMKEKGMKP 638
            V    M   G KP
Sbjct: 792 NVLMEAMHAAGHKP 805



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 232/566 (40%), Gaps = 88/566 (15%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + +VKS C        +++     +  ++EA  LF ++  E     NN ++   L  L
Sbjct: 256 LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGL 315

Query: 77  CKSCSVDLVEMRLKEMQDYGWG----YD------------------------------KY 102
           CKS  ++      + MQ+        YD                                
Sbjct: 316 CKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSG 375

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   ++Q  C +G+ D ALS+   +I  G+  D    S+L+    K  ++ +A E ++ M
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 435

Query: 162 DD--CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIGGLCKN 218
           D    +   +  ++  L++   K  +V +A  +F  M ++  F  D   Y ++I G CK 
Sbjct: 436 DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKI 495

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            +L  A +LY +M      P                             +V T     N 
Sbjct: 496 DELGRAEKLYKQMIDLNCVP-----------------------------NVTTYNAFLNG 526

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +MR     G I  A  + + M+                    SP+  ++  +I+      
Sbjct: 527 LMR----KGRIADAQGVYEEMV----------------AAGCSPDVITYSTLIHGFSLAR 566

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D A  LF  M   GC  N   YN L+ GLC  ++ +E++EL R+M E G  P   T  
Sbjct: 567 KHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYT 626

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C    +  A+ +  +M  +GH+P V     L+K   + GK  EA +    MV  
Sbjct: 627 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRVAE 517
              PD V ++  I GL   KR+D A+E+F  +   HGC PD+V YN +I GLC  QR++E
Sbjct: 687 QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 746

Query: 518 AEDLFNEMITKGLIPSVATYNLLING 543
           A  +F E+    L P    +N+L+  
Sbjct: 747 AMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 164/403 (40%), Gaps = 60/403 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L     V +A  +F  +  E   VP+  SY+ L++  CK   +   E   K+M D 
Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 511

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               +  T    L      G+   A  V+ E++  G   D   +S L+  FS   + D+A
Sbjct: 512 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQA 571

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL E M     R N  T+  L+HG  K+S+ D+A +LF KM + G   D   Y  ++ G
Sbjct: 572 HELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYG 631

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   ++E A++++ EM   G  PD                                  +
Sbjct: 632 FCNVGKIEQAVEVFDEMVSKGHDPD---------------------------------VV 658

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N +++     G   +A  L Q M+  +                  P+T S +I+I+ L
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQ----------------CKPDTVSHNIMIDGL 702

Query: 335 LKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            K  +LD A+ +F  M Q  GC  ++  YN+LI GLC   RL E+ ++ +E++     P 
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762

Query: 394 HFTLNSMFRCL---------CRRQDVVGALNLVRKMRVQGHEP 427
               N +   +          R +D      L+  M   GH+P
Sbjct: 763 PHAFNVLLEAIKCGIVYQFEIRFKDPPAFNVLMEAMHAAGHKP 805



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 5/315 (1%)

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           L+DG    AL+ FR +       +VF YN L+D L     L+++ ++  +M   G  P  
Sbjct: 107 LRDG--GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNG 164

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           FT   + +  C  ++   A+    +M  +G +P       + + L   GK  E  R    
Sbjct: 165 FTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGR 224

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            +++    +++   A +   +   +   A +LFR +   GC PD   Y+ ++   CK + 
Sbjct: 225 DLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLEN 284

Query: 515 VAEAEDLFNEMITKGLIP-SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           + EA  LF EM  +   P +   +   ++G CKSG I+QA      M E  S S  V  Y
Sbjct: 285 LDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV--Y 342

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             LI  L  +GR D A     E+  +   P+  T  ++I  LCK  R  +AL     M +
Sbjct: 343 DMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK 402

Query: 634 KGMKPDMFVFVALIS 648
           +G  PDM     LI+
Sbjct: 403 RGYCPDMATHSMLIN 417



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 92/234 (39%), Gaps = 38/234 (16%)

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +IK L   G+A+  FR+L       F  D+  Y+  +  LI  + +  A ++F  + A G
Sbjct: 103 VIKHLRDGGEALTFFRWLQ---ARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG 159

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+   Y +++   C  +   EA   F EM+ KG  PS   Y  +      +G   +  
Sbjct: 160 VVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFS 219

Query: 555 LCLSRMLEK---------------------------------ESG-SPDVITYTTLIDGL 580
               R LEK                                 +SG  PD   Y+ ++   
Sbjct: 220 RVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAH 279

Query: 581 CIAGRPDDAIMLWNEMEEKGCAP-NRITFMALITGLCKCDRPRAALVHFRMMKE 633
           C     D+A  L+ EM  +  AP N + + A ++GLCK  +   A    R M+E
Sbjct: 280 CKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE 333



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 1/184 (0%)

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL  FR + A     DV  YN ++  L + + + +A  +F +M+ +G++P+  TY +L+ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C   N D+A+     M++K    P    Y  + + L   G+  +   ++    EK  A
Sbjct: 173 SSCYERNSDEAVRFFGEMVDK-GFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
              +   AL+      D+   A   FR M + G KPD  ++  ++ A     N   AF++
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 663 LKEM 666
             EM
Sbjct: 292 FLEM 295


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 231/498 (46%), Gaps = 49/498 (9%)

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           + TF  LI  +          Q+FD+M +         + ++     K    E A++L+ 
Sbjct: 64  DSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFG 123

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
            M                            V E    R V +     NS++ +++  G  
Sbjct: 124 RM----------------------------VDEFQCRRTVRSF----NSVLNVIIQEGLF 151

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A    +  + G              K  +SPN  SF+++I  + K G +D A+ +FRE
Sbjct: 152 HRALEFYECGVGG--------------KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M    C  +VF Y  L+DGLC  +R++E+  LL EM+  G  P+  T N +   LC++ D
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 410 VVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +V    LV  M ++G  P  V +NT +I  LC  GK  +A   L  MV    +P+ V Y 
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNT-IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I GL+   R    + L   +   G   +  AY+ +ISGL K ++  EA  L+ +M+ K
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G  P++  Y+ LI+G C+ G +D+A   L  M+ K   +P+  TY++LI G    G    
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQK 435

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           AI +W EM +  C PN I +  LI GLC+  + R A++ +  M  +G++PD+  + ++I 
Sbjct: 436 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIH 495

Query: 649 AFLSELNPPLAFEVLKEM 666
              +  +  +  ++  EM
Sbjct: 496 GLCNAGSVEVGLKLFNEM 513



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 253/512 (49%), Gaps = 23/512 (4%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L++ Y NSG F     VF+ +     V  E  F ++  A+ K    +KA EL  RM
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD--KMTKSGFASDAAMYDVIIGGLCKN 218
            D+   R   ++F  +++  +++    +AL+ ++     K+  + +   ++++I  +CK 
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
             ++ A++++ EM      PD      + T C      TL+     EDR ++   LL + 
Sbjct: 186 GLVDRAIEVFREMAIQKCEPD------VFTYC------TLMDGLCKEDR-IDEAVLLLDE 232

Query: 279 IMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           +        S+   +N+L   +  KG+ +    +   M  KG V PN  +++ IIN L  
Sbjct: 233 MQIEGCFPSSV--TFNVLINGLCKKGDMVRVTKLVDNMFLKGCV-PNEVTYNTIINGLCL 289

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            GKLD A+SL   M    C+ N   Y  LI+GL    R  +   LL  +EE G     + 
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            +++   L + +    A+ L +KM  +G +P +   + LI  LC+ GK  EA   L +MV
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +G  P+   YS+ I G         A+ +++++  + C P+ + Y+++I GLC+  ++ 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTT 575
           EA  ++  M+ +GL P V  Y+ +I+G C +G+++  +   + ML +ES S PDV+TY  
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           L+  LC       AI L N M ++GC P+ IT
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 561



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 225/516 (43%), Gaps = 80/516 (15%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFN-EIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIE 159
           +   +L V    G F +AL  +   +     +  +V  F++++ A  K G VD+A E+  
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M       +  T+C L+ G  K+ R+D+A+ L D+M   G    +  ++V+I GLCK  
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            +    +L   M   G  P+    + +I     +G+L         D+ V   +LL   +
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL---------DKAV---SLLDRMV 304

Query: 280 MRILVSNGSIDQAY-NLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKD 337
               V N   D  Y  L+  ++K     D GV +L   +      N  ++  +I+ L K+
Sbjct: 305 ASKCVPN---DVTYGTLINGLVKQGRSVD-GVHLLSSLEERGHHANEYAYSTLISGLFKE 360

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K + A+ L+++M + GC  N+ +Y+ LIDGLC   +L+E+ E+L EM   G  P  FT 
Sbjct: 361 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +S+ +   +  +   A+ + ++M      P     ++LI  LC+ GK  EA    T M+ 
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF---------------------RDICAH--- 493
            G  PD+V YS+ I GL +   V++ L+LF                     R +C     
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540

Query: 494 -------------GCCPDVVAYNIIISGL---------------------CKAQRVAEAE 519
                        GC PD++  NI ++ L                      K QR+  A 
Sbjct: 541 SHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAA 600

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            +   M+ K L P+ +T+  +I   CK   + QA++
Sbjct: 601 KIIEVMLQKFLPPNASTWERIIPELCKPKKV-QAII 635



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 4/197 (2%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  L+ ++  +G C PN   Y+ L++ LC+   +D  +  L EM + G   + +T + 
Sbjct: 364 EEAMGLWKKMVEKG-CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L++ +  +G   KA+ V+ E+  +  V +E  +S+L+    + G++ +A  +   M    
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKM--TKSGFASDAAMYDVIIGGLCKNKQLEM 223
           +R +   +  +IHG      V+  L+LF++M   +S    D   Y++++  LCK   +  
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542

Query: 224 ALQLYSEMKGSGITPDF 240
           A+ L + M   G  PD 
Sbjct: 543 AIDLLNSMLDRGCNPDL 559


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 231/498 (46%), Gaps = 49/498 (9%)

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           + TF  LI  +          Q+FD+M +         + ++     K    E A++L+ 
Sbjct: 80  DSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFG 139

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
            M                            V E    R V +     NS++ +++  G  
Sbjct: 140 RM----------------------------VDEFQCRRTVRSF----NSVLNVIIQEGLF 167

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A    +  + G              K  +SPN  SF+++I  + K G +D A+ +FRE
Sbjct: 168 HRALEFYECGVGG--------------KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M    C  +VF Y  L+DGLC  +R++E+  LL EM+  G  P+  T N +   LC++ D
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 410 VVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +V    LV  M ++G  P  V +NT +I  LC  GK  +A   L  MV    +P+ V Y 
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNT-IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I GL+   R    + L   +   G   +  AY+ +ISGL K ++  EA  L+ +M+ K
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G  P++  Y+ LI+G C+ G +D+A   L  M+ K   +P+  TY++LI G    G    
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQK 451

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           AI +W EM +  C PN I +  LI GLC+  + R A++ +  M  +G++PD+  + ++I 
Sbjct: 452 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIH 511

Query: 649 AFLSELNPPLAFEVLKEM 666
              +  +  +  ++  EM
Sbjct: 512 GLCNAGSVEVGLKLFNEM 529



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 25/524 (4%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
           +M  Y  G    T   L++ Y NSG F     VF+ +     V  E  F ++  A+ K  
Sbjct: 72  QMGSYKSG--DSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAH 129

Query: 150 EVDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD--KMTKSGFASDAA 206
             +KA EL  RM D+   R   ++F  +++  +++    +AL+ ++     K+  + +  
Sbjct: 130 LPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL 189

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            ++++I  +CK   ++ A++++ EM      PD      + T C      TL+     ED
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPD------VFTYC------TLMDGLCKED 237

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIFKGTVSPNT 324
           R ++   LL + +        S+   +N+L   +  KG+ +    +   M  KG V PN 
Sbjct: 238 R-IDEAVLLLDEMQIEGCFPSSV--TFNVLINGLCKKGDMVRVTKLVDNMFLKGCV-PNE 293

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +++ IIN L   GKLD A+SL   M    C+ N   Y  LI+GL    R  +   LL  
Sbjct: 294 VTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSS 353

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +EE G     +  +++   L + +    A+ L +KM  +G +P +   + LI  LC+ GK
Sbjct: 354 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 413

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L +MV +G  P+   YS+ I G         A+ +++++  + C P+ + Y++
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GLC+  ++ EA  ++  M+ +GL P V  Y+ +I+G C +G+++  +   + ML +E
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQE 533

Query: 565 SGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           S S PDV+TY  L+  LC       AI L N M ++GC P+ IT
Sbjct: 534 SDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 225/516 (43%), Gaps = 80/516 (15%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFN-EIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIE 159
           +   +L V    G F +AL  +   +     +  +V  F++++ A  K G VD+A E+  
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M       +  T+C L+ G  K+ R+D+A+ L D+M   G    +  ++V+I GLCK  
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            +    +L   M   G  P+    + +I     +G+L         D+ V   +LL   +
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL---------DKAV---SLLDRMV 320

Query: 280 MRILVSNGSIDQAY-NLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKD 337
               V N   D  Y  L+  ++K     D GV +L   +      N  ++  +I+ L K+
Sbjct: 321 ASKCVPN---DVTYGTLINGLVKQGRSVD-GVHLLSSLEERGHHANEYAYSTLISGLFKE 376

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K + A+ L+++M + GC  N+ +Y+ LIDGLC   +L+E+ E+L EM   G  P  FT 
Sbjct: 377 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 436

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +S+ +   +  +   A+ + ++M      P     ++LI  LC+ GK  EA    T M+ 
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF---------------------RDICAH--- 493
            G  PD+V YS+ I GL +   V++ L+LF                     R +C     
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556

Query: 494 -------------GCCPDVVAYNIIISGL---------------------CKAQRVAEAE 519
                        GC PD++  NI ++ L                      K QR+  A 
Sbjct: 557 SHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAA 616

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            +   M+ K L P+ +T+  +I   CK   + QA++
Sbjct: 617 KIIEVMLQKFLPPNASTWERIIPELCKPKKV-QAII 651



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 4/197 (2%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  L+ ++  +G C PN   Y+ L++ LC+   +D  +  L EM + G   + +T + 
Sbjct: 380 EEAMGLWKKMVEKG-CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L++ +  +G   KA+ V+ E+  +  V +E  +S+L+    + G++ +A  +   M    
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKM--TKSGFASDAAMYDVIIGGLCKNKQLEM 223
           +R +   +  +IHG      V+  L+LF++M   +S    D   Y++++  LCK   +  
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 558

Query: 224 ALQLYSEMKGSGITPDF 240
           A+ L + M   G  PD 
Sbjct: 559 AIDLLNSMLDRGCNPDL 575


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 233/495 (47%), Gaps = 35/495 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF +L+H    K  +  AL     M   G + DA  Y+ ++   C+   L  A  L 
Sbjct: 207 NHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 266

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRI 282
           + MK  GI P     + L+++ +  G +    K +        + D+ T  +L       
Sbjct: 267 ARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVG---- 322

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +D+A+ L   M           E L     T  P+  +++ +++   K      
Sbjct: 323 LCQAGKVDEAFRLKDEM-----------ERL----STALPDVVTYNTLVDACFKWRCSSD 367

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL L  EM   G    +  +N ++  LC   +LEE+   L ++ E G  P   T N++  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQE 458
             C+  +V  A  L+ +M  +G    +K +T     ++  LCK  +  +A   L    Q 
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKG----LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+PD V Y   +         + AL L+  +      P +  YN +I GLC+ +R+ EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D  NE++ KGL+P   TYN++I+ +CK G+++ A    ++M+E  S  PDV+T  TL++
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN-SFKPDVVTCNTLMN 602

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC+ G+ D A+ L+    EKG   + IT+  LI  +CK      AL  F  M+ KG++P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 639 DMFVFVALISAFLSE 653
           D F +  ++SA LSE
Sbjct: 663 DAFTYNVVLSA-LSE 676



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 262/600 (43%), Gaps = 72/600 (12%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV----------DLVEMRLKEMQDYGWG 98
           A  L   ++R     P+  + N +L AL +S S            L+E+RL         
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHP------- 206

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL 157
            + YT   L+  +C+ G    AL+  + +   G   + V ++ LL A  + G + +A  L
Sbjct: 207 -NHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           + RM    I   + T+  L+  F +   + +A ++ + MT  GF  D   Y+V+  GLC+
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 218 NKQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
             +++ A +L  EM+  S   PD    + L+ +C             W           C
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK-----------WR----------C 364

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           +S             A  LL+ M       D GV+          P   + +I++ +L K
Sbjct: 365 SS------------DALRLLEEM------RDKGVK----------PTLVTHNIVVKSLCK 396

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +GKL+ AL    ++ + G   +V  YN LID  C +  + +++ L+ EM   G K   FT
Sbjct: 397 EGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           LN++   LC+ +    A  L+     +G  P  V + T++     K      A R    M
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF-KEYNPEPALRLWDQM 515

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           ++   +P I  Y+  I GL  ++R+  A++   ++   G  PD   YNIII   CK   +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A    N+M+     P V T N L+NG C  G +D+A+      +EK     DVITY T
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK-GKKVDVITYNT 634

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI  +C  G  D A+  +++ME KG  P+  T+  +++ L +  R   A      + + G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 261/578 (45%), Gaps = 25/578 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN+Y++N L+   C   ++      L  MQ +G   D  T   LL  +C  G   +A ++
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 124 FNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +   G    +  ++ L+ AF++ G + +A +++E M       + +T+ VL  G  +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 183 KSRVDKALQLFDKMTKSGFA-SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             +VD+A +L D+M +   A  D   Y+ ++    K +    AL+L  EM+  G+ P   
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + ++ S   EG+L   + ++ +  +  +    +  N+++      G++ +A+ L+  M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 300 I-KGEPIADVGVEMLMIF-------------------KGTVSPNTSSFDIIINTLLKDGK 339
           + KG  +    +  ++                     +G V P+  S+  ++    K+  
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV-PDEVSYGTVMAAYFKEYN 504

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            + AL L+ +M +   + ++  YN LI GLC   RL+E+ + L E+ E G  P   T N 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+  D+  A     KM     +P V     L+  LC HGK  +A +     V++G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D++ Y+  I  +  +  VD AL  F D+   G  PD   YN+++S L +A R  EA 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++ +++   G +       LL        ++ +          +++    + TY   ++G
Sbjct: 685 NMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNG 744

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           LC  G+  +A  + +EM +KG   +  T++ L+ GL K
Sbjct: 745 LCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 169/369 (45%), Gaps = 35/369 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +F+++++T    G L  AL+    M   G   +   YN L++  C    L E+ 
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  M+  G  PT  T N++     R   +  A  +V  M   G EP ++   +L   L
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGL 323

Query: 440 CKHGKAMEAFRFLTDMVQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           C+ GK  EAFR   +M +    LPD+V Y+  +      +    AL L  ++   G  P 
Sbjct: 324 CQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V +NI++  LCK  ++ EA     ++  +GL P V TYN LI+ +CK+GN+ +A   + 
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443

Query: 559 RMLEK---------------------------------ESG-SPDVITYTTLIDGLCIAG 584
            M+ K                                 + G  PD ++Y T++       
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
            P+ A+ LW++M E+   P+  T+  LI GLC+ +R + A+     + EKG+ PD   + 
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563

Query: 645 ALISAFLSE 653
            +I A+  E
Sbjct: 564 IIIHAYCKE 572



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 4/350 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKL--DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           V P+  + + +++ L +        +L +FR + ++    N + +N L+   C+   L +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +   L  M+  G  P   T N++    CR+  +  A  L+ +M+  G  P       L+ 
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCC 496
              + G   +A + +  M   GF PD+  Y+    GL    +VD A  L  ++       
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDVV YN ++    K +  ++A  L  EM  KG+ P++ T+N+++   CK G +++A+  
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L ++ E E  +PDVITY TLID  C AG    A  L +EM  KG   +  T   ++  LC
Sbjct: 407 LEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  R   A        ++G  PD   +  +++A+  E NP  A  +  +M
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/414 (20%), Positives = 176/414 (42%), Gaps = 58/414 (14%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++ L   G +EEA    +++  EGL  P+  +YN L++A CK+ +V      + EM  
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLA-PDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
            G   D +TL  +L   C   +++ A  + +     G+V DE  +  ++ A+ K    + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L ++M +  +  +  T+  LI G  +  R+ +A+   +++ + G   D   Y++II 
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIH 567

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNT 271
             CK   LE A + +++M  +   PD    + L+      G+L   +K  E W ++    
Sbjct: 568 AYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV 627

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             +  N++++ +   G +D A +    M +KG                 + P+  +++++
Sbjct: 628 DVITYNTLIQSMCKVGDVDTALHFFDDMEVKG-----------------LQPDAFTYNVV 670

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVF------------------------------ 360
           ++ L + G+ + A ++  ++   G +   F                              
Sbjct: 671 LSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKA 730

Query: 361 ------LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
                  Y   ++GLC   +L+E+  +L EM + G      T  ++   L +RQ
Sbjct: 731 QDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQ 784


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 251/545 (46%), Gaps = 22/545 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L+ VY      ++ LSVF+++I      D    + +L        + KA E+   M +  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I+    T+  L+  + K  +V + L L  +M + G A +   Y+V+I GL K  + E A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRIL 283
            L  EM  +G+       + LI    ++G L   L ++E    +  +      NS +  L
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G +  A   L  M+    + DV                 S++ +I    + G L  A
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDV----------------VSYNTLIYGYCRLGNLMKA 393

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LF E+  I     +  YN L+DGLC    LE + +L  EM   G  P   T   +   
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 404 LCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            C+   +  A     +M  +G E     + T ++ EL K G    AF    +M+ +GF P
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEMLAKGFPP 512

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D++ Y+  + GL  +  ++ A EL + + + G  PD V Y  II    +  R+ +  ++F
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM++KGL PSV TY +LI+G    G +++A +  S M EK    P+VITY +LI+GLC 
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCK 631

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             R D A   + EM EKG  PN+ ++  LI   C     + AL  ++ M ++G++PD   
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691

Query: 643 FVALI 647
             AL+
Sbjct: 692 HSALL 696



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 249/536 (46%), Gaps = 19/536 (3%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V   +  +L+  +SK   V++   + ++M    +  + K    ++     K  + KA+++
Sbjct: 162 VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEV 221

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +  M + G       Y+ ++   CK  +++  L L SEM+  G  P+    + LI   S 
Sbjct: 222 YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281

Query: 253 EGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           +GE       I E     +       N ++    + G + +A +L + M+          
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV---------- 331

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 KG  SP  ++++  I  L K G++  A+    +M     + +V  YN LI G C
Sbjct: 332 -----LKGA-SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               L +++ L  E+      PT  T N++   LCR+ ++  A  L  +M  +G  P + 
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T+L+   CK G    A  F  +M+ EG   D   Y+  I G + +     A  L  ++
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD++ YN+++ GLCK   + EA +L  +M++ G+IP   TY  +I+   ++G +
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +       ML K   +P V+TYT LI G    GR + A + ++EM+EKG  PN IT+ +
Sbjct: 566 RKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI GLCK  R   A   F  M EKG+ P+ + +  LI+   +  N   A  + K+M
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 255/552 (46%), Gaps = 23/552 (4%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKE 91
           L  LI       +VE+   +FD++ +  L  P+  + N +L  L  K      VE+  + 
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLS-PDVKNCNRILRILRDKDLMSKAVEV-YRT 224

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M ++G      T   LL  YC  G+  + L + +E+   G     V +++L+   SK GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            ++A  LI  M    ++++  T+  LI+G+  K  + +AL L ++M   G +   A Y+ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
            I GLCK  ++  A+Q  S+M  + + PD    + LI      G L        E R + 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 271 TMTLLC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
               +   N+++  L   G ++ A  L               ++ MI +G ++P+  ++ 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQL---------------KVEMINEG-IAPDIVTYT 448

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I++N   K G L +A   F EM   G   + + Y   I G         ++ L  EM   
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GF P     N +   LC+  ++  A  L++KM   G  P     T +I    ++G+  + 
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                +M+ +G  P +V Y+  I G     R++ A   F ++   G  P+V+ YN +I+G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK +R+ +A + F EM+ KG+ P+  +Y +LIN  C  GN  +A+    +ML++    P
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR-GVQP 687

Query: 569 DVITYTTLIDGL 580
           D  T++ L+  L
Sbjct: 688 DSCTHSALLKQL 699



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 227/505 (44%), Gaps = 44/505 (8%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN----KQL 221
            R +E  FC ++    + + +  A  + +++     A+   + DV+IGG   +    K L
Sbjct: 111 FRRSEFVFCAILEILAQNNLMRSAYWVMERVIN---ANMHRIVDVLIGGCVSSEVSVKIL 167

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           ++ + +YS  K S +     +  K+I S      L+  VK              CN I+R
Sbjct: 168 DLLIWVYS--KKSMVEQCLSVFDKMIKS-----RLSPDVKN-------------CNRILR 207

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           IL     + +A  + + M       + G++          P   +++ ++++  K GK+ 
Sbjct: 208 ILRDKDLMSKAVEVYRTM------GEFGIK----------PTIVTYNTLLDSYCKGGKVQ 251

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
             L L  EM + GC  N   YN LI+GL      E++  L+ EM ++G K + +T N + 
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 311

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                +  +  AL+L  +M ++G  P V      I  LCK G+  +A + L+DM+    L
Sbjct: 312 YGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLL 371

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+V Y+  I G   +  +  A  LF ++ +    P +V YN ++ GLC+   +  A+ L
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             EMI +G+ P + TY +L+NG CK G++  A      ML  E    D   Y T I G  
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH-EGLELDSYAYATRIVGEL 490

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G    A  L  EM  KG  P+ I +  ++ GLCK      A    + M   G+ PD  
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            + ++I A L         E+  EM
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEM 575



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 216/488 (44%), Gaps = 27/488 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++   L  +++R G C PN+ +YN L+  L K    +  +  + EM   G     YT
Sbjct: 248 GKVQQGLDLLSEMQRRG-CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
             PL+  Y N G   +ALS+  E++  G       ++  +    K G +  A + +  M 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             N+  +  ++  LI+G+ +   + KA  LFD++           Y+ ++ GLC+  +LE
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           +A QL  EM   GI PD    + L+      G L++  +E +++     + L   +    
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM-AQEFFDEMLHEGLELDSYAYATR 485

Query: 283 LVSN---GSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +V     G   +A++L + M+ KG P                 P+   ++++++ L K G
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFP-----------------PDLIIYNVVVDGLCKLG 528

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L+ A  L ++M   G + +   Y ++I     + RL +  E+  EM   G  P+  T  
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +      +  +  A     +M+ +G  P V     LI  LCK  +  +A+ F  +MV++
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL---CKAQRV 515
           G  P+   Y+  I    ++     AL L++ +   G  PD   ++ ++  L   CK Q V
Sbjct: 649 GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708

Query: 516 AEAEDLFN 523
            + E L +
Sbjct: 709 RQLESLLD 716


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 173/682 (25%), Positives = 290/682 (42%), Gaps = 61/682 (8%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG    A  + D++  +GL + +   YN L+   C++  VD     L  M++ G   +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPM-DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           T TP +  YC +   ++A  ++  ++ +G  +D    S L+    + G   +A  L   M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD----------------- 204
           D      N  T+C LI    K  R  + L L  +M   G   D                 
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 205 ------------------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
                                Y V+I  LCK   ++ A Q+  EM+   I+P+    S +
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 247 ITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           I      G      E   ++KE   + +V T   L +   +    + +++  +++L   +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 301 K-GEPIADVGV----------EMLMIFKGTVSPNTS----SFDIIINTLLKDGKLDLALS 345
           K  + I D  V          E + +FK       S    ++  +I+ L K G +  A  
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
             +E+     + +  +YN  I+ LC   + +E+   L EM   G KP   T N+M    C
Sbjct: 541 FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R+ +   AL L+ +M++   +P  + +NTL +  L   G   +A   L +MV  GF P  
Sbjct: 601 RKGETAKALKLLHEMKMSSIKPNLITYNTL-VAGLFGTGAVEKAKYLLNEMVSAGFSPSS 659

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + +   +      +R+D+ L++   +   G   D+  YN ++  LC      +A  +  E
Sbjct: 660 LTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE 719

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G+ P   T+N LI G CKS ++D A    ++ML +   SP++ T+ TL+ GL   G
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI-SPNIATFNTLLGGLESVG 778

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A  +  EME+ G  PN +T+  L TG  K      A+  +  M  KG  P +  + 
Sbjct: 779 RIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYN 838

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           ALIS F        A E+ K+M
Sbjct: 839 ALISDFTKAGMMTQAKELFKDM 860



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 266/629 (42%), Gaps = 35/629 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN LL AL        V   L EM   G  +D  T+  LL   C +GQ D A ++
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            +       +D   ++ L+  + + G+   A  + +RM    + ++   +  L+ GF + 
Sbjct: 158 ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +VD A  + D M ++G   + A Y   I   C+ K +E A  LY  M  +G+  D   L
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           S L+     +G   E   L +E+ +          C +++  L   G   +  +LL  M+
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC-TLIDSLAKAGRGKELLSLLGEMV 336

Query: 301 KGEPIAD-VGVEMLMIFKG------------------TVSPNTSSFDIIINTLLKDGKLD 341
               + D V    LM + G                   +SPN  ++ ++I+ L K   +D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +  EM +     NV  ++++I+G      L+++ E  R M+E G  P   T  ++ 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC----KHGKAMEAFRFLTDMVQ 457
               + Q    AL +   M  +G    VK N  ++  L     ++GK  EA     D   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEG----VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G   D V Y+  I GL     +  A +  +++      PD V YN+ I+ LC   +  E
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+    EM   GL P  +TYN +I   C+ G   +A+  L  M +  S  P++ITY TL+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMSSIKPNLITYNTLV 631

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GL   G  + A  L NEM   G +P+ +T   ++    +  R    L     M   G+ 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLH 691

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
            D+ V+  L+           A  VL+EM
Sbjct: 692 ADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 256/599 (42%), Gaps = 59/599 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A R   L  L  ++V     M       L+  LG  G  +E          + L  P
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS-P 377

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L++ALCK+ +VD  E  L EM++     +  T + ++  +   G  DKA + +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEY 436

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++    ++ +V  +  L+  F K+   D A E+   M    +++N+     L++G  +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 183 KSRVDKALQLFDKMTKSGFA-----------------------------------SDAAM 207
             ++++A+ LF   + SG +                                    DA +
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V I  LC   + + A    +EM+  G+ PD    + +I S   +GE    +K + E +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +    +  N+++  L   G++++A  LL  M+                    SP++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA----------------GFSPSSL 660

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +   ++    +  +LD+ L +   M   G   ++ +YN L+  LC      ++  +L EM
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             SG  P   T N++    C+   +  A     +M  Q   P +     L+  L   G+ 
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSA-AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            EA   L +M + G  P+ + Y   A G      +V+ A+ L+ ++   G  P V  YN 
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNA 839

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +IS   KA  + +A++LF +M  +G+ P+  TY++L++GW +  N  +   CL  M EK
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEK 898



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 115/526 (21%), Positives = 214/526 (40%), Gaps = 86/526 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G +EEA  LF      GL + ++ +Y  L++ L K+  +       +E+ D 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSL-DHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D       +   C  G+F +A S   E+ + G   D+  ++ ++V+  + GE  KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M   +I+ N  T+  L+ G      V+KA  L ++M  +GF+  +  +  ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             ++++L++ L ++  M  +G+  D  +                                
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVY------------------------------- 697

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++++L  +G   +A  +L+ M+ G  IA               P+T +F+ +I   
Sbjct: 698 --NTLLQVLCYHGMTRKATVVLEEML-GSGIA---------------PDTITFNALILGH 739

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   LD A + + +M       N+  +N L+ GL +  R+ E+  +L EME+SG +P +
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T + +     ++ + V A+ L  +M  +G  P V     LI +  K G   +A     D
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M + G  P                                 C     Y+I++SG  + + 
Sbjct: 860 MQKRGVHPT-------------------------------SC----TYDILVSGWSRIRN 884

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             E +    +M  KG  PS  T + +   + K G   QA   L  +
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 282/605 (46%), Gaps = 46/605 (7%)

Query: 1   MASILSRARRIAP-----LRVLAQ------DVVKS------RCFMSPGALGFLIRCLGSV 43
           M  IL R+RR+       LR++ +      ++V+S       C  +P     L+R     
Sbjct: 242 MIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQA 301

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
             + E    F  +K +GLCV  N + N LL  L K   VDL     +E+   G   + YT
Sbjct: 302 RKLREGCEAFRVLKSKGLCVSIN-ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 360

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           L  ++   C + + +   S  +++ + G + D   ++ L+ A+ + G +++A EL++ M 
Sbjct: 361 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++    T+  +I+G  K  +  +A  + D+M K G + D A Y++++   C+N  + 
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 480

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-NSIMR 281
            A +++ EM   G+ PD    S LI   S  G L   +K     RD+    L   N I  
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF---RDMKNAGLAPDNVIYT 537

Query: 282 ILVS----NGSIDQA------------------YN-LLQAMIKGEPIADVGVEMLMIFKG 318
           IL+     NG + +A                  YN +L  + K + +++       + + 
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            V P+  +F  +IN   KDG ++ A++LF  M Q     +V  YN LIDG C  + +E+ 
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            EL  +M      P H +   +    C    V  A  L  +M  +G E  +     ++K 
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C+ G A++A  FL++M+ +G +PD + Y+  I G I  + +D A  L   +   G  PD
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           V+ YN+I++G  +  R+ EAE +  +MI +G+ P  +TY  LING     N+ +A     
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837

Query: 559 RMLEK 563
            ML++
Sbjct: 838 EMLQR 842



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 259/555 (46%), Gaps = 30/555 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+  + +  ++ + CE    +    + ++      L+ G VK   VD A +++ ++
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 349

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG   +    +++I  LCKN+++E      S+M+  G+ PD    + LI +   +G  
Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG-- 407

Query: 257 TLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             L++E +E       + +       N+I+  L   G   +A  +L  M+K     D   
Sbjct: 408 --LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 465

Query: 311 EMLMIFK-------------------GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             +++ +                     V P+  SF  +I  L K+G LD AL  FR+M 
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 525

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +  +Y  LI G C +  + E+ ++  EM E G      T N++   LC+ + + 
Sbjct: 526 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLS 585

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L  +M  +G  P     T LI    K G   +A      M+Q    PD+V Y+  I
Sbjct: 586 EADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 645

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      ++   EL+ D+ +    P+ ++Y I+I+G C    V+EA  L++EM+ KG  
Sbjct: 646 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 705

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            ++ T N ++ G+C++GN  +A   LS ML K    PD ITY TLI+G       D A  
Sbjct: 706 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFA 764

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L N+ME  G  P+ IT+  ++ G  +  R + A +    M E+G+ PD   + +LI+  +
Sbjct: 765 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 824

Query: 652 SELNPPLAFEVLKEM 666
           ++ N   AF V  EM
Sbjct: 825 TQNNLKEAFRVHDEM 839



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 229/534 (42%), Gaps = 53/534 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L + ++I   +    D+ +   F        LI      GL+EEA  L D +  +G
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L  P  ++YN ++  LCK+      +  L EM   G   D  T   LL   C +     A
Sbjct: 424 L-KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+E+   G V + V FS L+   SK G +D+A +    M +  +  +   + +LI G
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 542

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   + +AL++ D+M + G   D   Y+ I+ GLCK K L  A +L++EM   G+ PD
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 602

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           F   + LI                                      +G++++A  L + M
Sbjct: 603 FYTFTTLING---------------------------------YXKDGNMNKAVTLFEMM 629

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+                  + P+  +++ +I+   K  +++    L+ +M       N 
Sbjct: 630 IQR----------------NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 673

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LI+G CN   + E++ L  EM E GF+ T  T N++ +  CR  + V A   +  
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 733

Query: 420 MRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M ++G  P  + +NTL I    K      AF  +  M   G LPD++ Y+  + G     
Sbjct: 734 MLLKGIVPDGITYNTL-INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 792

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           R+  A  +   +   G  PD   Y  +I+G      + EA  + +EM+ +G +P
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 252/551 (45%), Gaps = 52/551 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV-DKACELIERMDDCNIRLNEKTFCV 175
           D AL+ FN ++    +   + F+ LL A  +  +  D    L ++M+   +  N  T  +
Sbjct: 72  DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F     VD    +  K+ K G       +  +I GLCK  +   AL+L+ +M   G
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                             V T T + N + ++    G    A  L
Sbjct: 192 CQPD-----------------------------VYTYTTIINGLCKM----GETAAAAGL 218

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           ++ M       +VG +          P+  ++  +I++L KD  ++ AL +F  M   G 
Sbjct: 219 IKKM------GEVGCQ----------PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGI 262

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
              V  Y +LI GLC+ +R +E+  +L EM      P   T + +    C+  +V+ A  
Sbjct: 263 SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQG 322

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +++ M   G EP V     L+       + +EA +    M+  G  PD+  YS  I G  
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            +KR+D A +LF ++   G  P+ V+Y  +I   C+  ++ EA +LF +M T G +P + 
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L+ G+CK G + +A   L R ++     P+++ YT LID +C +G  + A  L++E
Sbjct: 443 TYSVLLEGFCKQGYLGKAFR-LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSE 501

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +   G  P+   +  +I GLCK      AL  FR M+E G  P+ F +  +I  FL   +
Sbjct: 502 LFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKD 561

Query: 656 PPLAFEVLKEM 666
              A +++ EM
Sbjct: 562 ESRAVQLIGEM 572



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 222/487 (45%), Gaps = 18/487 (3%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L  Q++  GL  PN  + N L+   C    VDL    L ++   G      T T L+   
Sbjct: 113 LSKQMELAGLS-PNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGL 171

Query: 112 CNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C +G+F +AL +F++++  G   D + ++ ++    K GE   A  LI++M +   + + 
Sbjct: 172 CKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDV 231

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  LI    K   V++AL +F  M   G +     Y  +I GLC   + + A  + +E
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNE 291

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSI 289
           M    I PD    S LI     EG        + E + V  TMT +   +   +++  S+
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGN-------VLEAQGVLKTMTEM--GVEPNVITYNSL 342

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
              Y+L   +++   + DV     MI +G   P+  S+ I+IN      ++D A  LF E
Sbjct: 343 MHGYSLQMEVVEARKLFDV-----MITRG-CKPDVFSYSILINGYCMVKRIDEAKQLFNE 396

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   N   Y  LI   C   +L E+ EL ++M  +G+ P   T + +    C++  
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L R M+    +P +   T+LI  +CK G    A +  +++   G  PD+  Y+ 
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL     +D ALE FR +   GC P+  +YN+II G  + +  + A  L  EM  KG
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576

Query: 530 LIPSVAT 536
            +    T
Sbjct: 577 FVADEGT 583



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%)

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           + + +A   FN M+ +  +P +  +N L++   +      A++ LS+ +E    SP+  T
Sbjct: 69  RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
              LI+  C+    D    +  ++ + G  P  ITF  LI GLCK      AL  F  M 
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +G +PD++ +  +I+          A  ++K+M
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 242/510 (47%), Gaps = 29/510 (5%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + KA  +   M+   I+    T+  ++  + K+ RVD+AL+L  +M + G   +   Y+V
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR 267
           ++ GL K  +LE A  L  EM  SG+       + LI     +G   E   LV+E+   R
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              T++                   YN L+  + K   +  V +    + K   +P+  S
Sbjct: 316 AFPTLS------------------TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS 357

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ ++    + G +  A  LF E+     +  V  YN LI GLC    L+ +  L +EM 
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT 417

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA 445
           + G  P  FT   +     +   V  A     +M  +G +P    +NT ++ E+ K    
Sbjct: 418 DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM-KIADT 476

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             AF    +M+  GF PD++ Y+  +  L      + A +L  ++ + G  PD V Y  I
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G  K   + +A ++FNEM++KG+ PSV TY +LI+       +D A +  S+MLEK S
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK-S 595

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              +VITY  +I+GLC+  R D+A   ++EMEEKG  PN+ ++  LI   C       AL
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEAL 655

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELN 655
             +R M ++ ++PD F      S FL  L+
Sbjct: 656 RLYREMLDRKIQPDSFTH----SVFLKNLH 681



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 243/548 (44%), Gaps = 56/548 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++R L    L+ +A  ++  +++ G+  P   +YN +L++ CK   VD     L EMQ+ 
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGI-KPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G               C                   + ++  +++L+   SK GE+++A 
Sbjct: 245 G---------------C-------------------YPNDVTYNVLVNGLSKKGELEQAK 270

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            LIE M +  + ++  T+  LI+GF +K    +A  L ++M         + Y+ ++ GL
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTM 272
           CK  Q+      +S+M  S  TPD    + L+      G   E  LL  E+ + RD+   
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPT 389

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +  N+++  L   G +D A  L + M       D G          + P+  ++ I++N
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEM------TDQG----------LFPDIFTYTILVN 433

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K G + +A   F EM   G   + F YN  I G         ++ +  EM  +GF P
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP 493

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N     LC++ +   A +L+  M   G  P     T +I    K+G   +A    
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+ +G  P +V Y+  I      + +DLA   F  +       +V+ YN II+GLC  
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           +R+ EA   F+EM  KG++P+  +Y +LIN  C  G  ++A+     ML+++   PD  T
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI-QPDSFT 672

Query: 573 YTTLIDGL 580
           ++  +  L
Sbjct: 673 HSVFLKNL 680



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 218/508 (42%), Gaps = 28/508 (5%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M   + + +E  FC ++   V    +  A  + +++          + DV+I G      
Sbjct: 110 MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMH---GVVDVLIAGHV---- 162

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNS 278
               L ++ +M  +G+ PD +  ++++    DE  L+    V  + E   +    +  N+
Sbjct: 163 --XCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++      G +DQA  LL  M +               +G   PN  ++++++N L K G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQE---------------RGCY-PNDVTYNVLVNGLSKKG 264

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +L+ A  L  EM   G   + + YN LI+G C      E+++L+ EM      PT  T N
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LC+   V G       M      P +     L+   C+ G   EAF    ++   
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             +P ++ Y+  I GL     +D AL L +++   G  PD+  Y I+++G  K   V+ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              FNEM++KGL P    YN  I G  K  +   A      ML      PDVITY   + 
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAA-GFPPDVITYNVFVH 503

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC  G  ++A  L   M   G  P+ +T+ ++I G  K    R A   F  M  KG+ P
Sbjct: 504 ALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  +  LI A  ++    LAF    +M
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKM 591



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/480 (21%), Positives = 200/480 (41%), Gaps = 22/480 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  L  +++  G C PN+ +YN L+  L K   ++  +  ++EM + G     YT
Sbjct: 229 GRVDQALELLSEMQERG-CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYT 287

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
             PL+  +C  G F +A  +  E+++   +     ++ L+    KW +V         M 
Sbjct: 288 YNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML 347

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  +F  L++G+ +   + +A  LFD++           Y+ +I GLC    L+
Sbjct: 348 KSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL+L  EM   G+ PD    + L+  C   G ++                 +       
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS-----------------MARGFFNE 450

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM---IFKGTVSPNTSSFDIIINTLLKDGK 339
           ++S G     +     ++    IAD  V   M   +      P+  ++++ ++ L + G 
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            + A  L   M   G + +   Y ++I+G   +  L ++ E+  EM   G  P+  T   
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +      +Q +  A     KM  +     V     +I  LC   +  EA+++  +M ++G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            LP+   Y+  I    ++   + AL L+R++      PD   +++ +  L +  +V   +
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 183/433 (42%), Gaps = 33/433 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGL-VEEANMLFDQVKREGLCV 63
           LS+   +   + L ++++ S   +S      LI      GL VE  +++ + V R     
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-- 317

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN L+  LCK   V  V +R  +M    +  D  +   LL  YC +G   +A  +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+E+     V   + ++ L+     WG +D A  L + M D  +  +  T+ +L++G  K
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  A   F++M   G   D   Y+  I G  K     +A  +  EM  +G  PD   
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 243 LSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            +  + +   +G   E   L++ +  D    D  T T    SI+   V NG + +A  + 
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYT----SIINGFVKNGHLRKAREVF 553

Query: 297 QAMI-KGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKD 337
             M+ KG   + V   +L+                  + + +V  N  +++ IIN L   
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++D A   F EM + G + N F Y  LI+  CN    EE+  L REM +   +P  FT 
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673

Query: 398 NSMFRCLCRRQDV 410
           +   + L R   V
Sbjct: 674 SVFLKNLHRDYQV 686



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 154/343 (44%), Gaps = 44/343 (12%)

Query: 342 LALSLFR-EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           +AL  FR  M Q    ++ F++  ++D L  ++ +  +Y ++  +         F ++ +
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERV-------VSFEMHGV 153

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L      V  L +  KM   G  P VK+   +++ L       +A      M Q G 
Sbjct: 154 VDVLIAGH--VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGI 211

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P +V Y+  +       RVD ALEL  ++   GC P+ V YN++++GL K   + +A+ 
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE------------------ 562
           L  EM+  GL  S  TYN LING+C+ G   +A   +  M+                   
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 563 ----------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
                           K   +PD++++ +L+ G C  G   +A +L++E++ +   P  I
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           T+  LI GLC      AAL   + M ++G+ PD+F +  L++ 
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 242/510 (47%), Gaps = 29/510 (5%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + KA  +   M+   I+    T+  ++  + K+ RVD+AL+L  +M + G   +   Y+V
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR 267
           ++ GL K  +LE A  L  EM  SG+       + LI     +G   E   LV+E+   R
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
              T++                   YN L+  + K   +  V +    + K   +P+  S
Sbjct: 316 AFPTLS------------------TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS 357

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ ++    + G +  A  LF E+     +  V  YN LI GLC    L+ +  L +EM 
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT 417

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA 445
           + G  P  FT   +     +   V  A     +M  +G +P    +NT ++ E+ K    
Sbjct: 418 DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEM-KIADT 476

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             AF    +M+  GF PD++ Y+  +  L      + A +L  ++ + G  PD V Y  I
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSI 536

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G  K   + +A ++FNEM++KG+ PSV TY +LI+       +D A +  S+MLEK S
Sbjct: 537 INGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK-S 595

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              +VITY  +I+GLC+  R D+A   ++EMEEKG  PN+ ++  LI   C       AL
Sbjct: 596 VPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEAL 655

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELN 655
             +R M ++ ++PD F      S FL  L+
Sbjct: 656 RLYREMLDRKIQPDSFTH----SVFLKNLH 681



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 243/548 (44%), Gaps = 56/548 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++R L    L+ +A  ++  +++ G+  P   +YN +L++ CK   VD     L EMQ+ 
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGI-KPTVVTYNTMLDSYCKEGRVDQALELLSEMQER 244

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G               C                   + ++  +++L+   SK GE+++A 
Sbjct: 245 G---------------C-------------------YPNDVTYNVLVNGLSKKGELEQAK 270

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            LIE M +  + ++  T+  LI+GF +K    +A  L ++M         + Y+ ++ GL
Sbjct: 271 GLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTM 272
           CK  Q+      +S+M  S  TPD    + L+      G   E  LL  E+ + RD+   
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPT 389

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +  N+++  L   G +D A  L + M       D G          + P+  ++ I++N
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEM------TDQG----------LFPDIFTYTILVN 433

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K G + +A   F EM   G   + F YN  I G         ++ +  EM  +GF P
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP 493

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N     LC++ +   A +L+  M   G  P     T +I    K+G   +A    
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+ +G  P +V Y+  I      + +DLA   F  +       +V+ YN II+GLC  
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           +R+ EA   F+EM  KG++P+  +Y +LIN  C  G  ++A+     ML+++   PD  T
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI-QPDSFT 672

Query: 573 YTTLIDGL 580
           ++  +  L
Sbjct: 673 HSVFLKNL 680



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 218/508 (42%), Gaps = 28/508 (5%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M   + + +E  FC ++   V    +  A  + +++          + DV+I G      
Sbjct: 110 MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMH---GVVDVLIAGHV---- 162

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNS 278
               L ++ +M  +G+ PD +  ++++    DE  L+    V  + E   +    +  N+
Sbjct: 163 --XCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++      G +DQA  LL  M +               +G   PN  ++++++N L K G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQE---------------RGCY-PNDVTYNVLVNGLSKKG 264

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +L+ A  L  EM   G   + + YN LI+G C      E+++L+ EM      PT  T N
Sbjct: 265 ELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYN 324

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LC+   V G       M      P +     L+   C+ G   EAF    ++   
Sbjct: 325 TLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR 384

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             +P ++ Y+  I GL     +D AL L +++   G  PD+  Y I+++G  K   V+ A
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMA 444

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              FNEM++KGL P    YN  I G  K  +   A      ML      PDVITY   + 
Sbjct: 445 RGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAA-GFPPDVITYNVFVH 503

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC  G  ++A  L   M   G  P+ +T+ ++I G  K    R A   F  M  KG+ P
Sbjct: 504 ALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAP 563

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  +  LI A  ++    LAF    +M
Sbjct: 564 SVVTYTVLIHAHAAKQMLDLAFMYFSKM 591



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/480 (21%), Positives = 200/480 (41%), Gaps = 22/480 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  L  +++  G C PN+ +YN L+  L K   ++  +  ++EM + G     YT
Sbjct: 229 GRVDQALELLSEMQERG-CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYT 287

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
             PL+  +C  G F +A  +  E+++   +     ++ L+    KW +V         M 
Sbjct: 288 YNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML 347

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  +F  L++G+ +   + +A  LFD++           Y+ +I GLC    L+
Sbjct: 348 KSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL+L  EM   G+ PD    + L+  C   G ++                 +       
Sbjct: 408 AALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS-----------------MARGFFNE 450

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM---IFKGTVSPNTSSFDIIINTLLKDGK 339
           ++S G     +     ++    IAD  V   M   +      P+  ++++ ++ L + G 
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            + A  L   M   G + +   Y ++I+G   +  L ++ E+  EM   G  P+  T   
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +      +Q +  A     KM  +     V     +I  LC   +  EA+++  +M ++G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            LP+   Y+  I    ++   + AL L+R++      PD   +++ +  L +  +V   +
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 183/433 (42%), Gaps = 33/433 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGL-VEEANMLFDQVKREGLCV 63
           LS+   +   + L ++++ S   +S      LI      GL VE  +++ + V R     
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-- 317

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN L+  LCK   V  V +R  +M    +  D  +   LL  YC +G   +A  +
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+E+     V   + ++ L+     WG +D A  L + M D  +  +  T+ +L++G  K
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V  A   F++M   G   D   Y+  I G  K     +A  +  EM  +G  PD   
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 243 LSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            +  + +   +G   E   L++ +  D    D  T T    SI+   V NG + +A  + 
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYT----SIINGFVKNGHLRKAREVF 553

Query: 297 QAMI-KGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKD 337
             M+ KG   + V   +L+                  + + +V  N  +++ IIN L   
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++D A   F EM + G + N F Y  LI+  CN    EE+  L REM +   +P  FT 
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTH 673

Query: 398 NSMFRCLCRRQDV 410
           +   + L R   V
Sbjct: 674 SVFLKNLHRDYQV 686



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 154/343 (44%), Gaps = 44/343 (12%)

Query: 342 LALSLFRE-MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           +AL  FR  M Q    ++ F++  ++D L  ++ +  +Y ++  +         F ++ +
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERV-------VSFEMHGV 153

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              L      V  L +  KM   G  P VK+   +++ L       +A      M Q G 
Sbjct: 154 VDVLIAGH--VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGI 211

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P +V Y+  +       RVD ALEL  ++   GC P+ V YN++++GL K   + +A+ 
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE------------------ 562
           L  EM+  GL  S  TYN LING+C+ G   +A   +  M+                   
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 563 ----------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
                           K   +PD++++ +L+ G C  G   +A +L++E++ +   P  I
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           T+  LI GLC      AAL   + M ++G+ PD+F +  L++ 
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 152/560 (27%), Positives = 263/560 (46%), Gaps = 23/560 (4%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +C P+  ++N L+ A C      +    L  M   G      T T +L   C  G   +A
Sbjct: 277 MCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEA 336

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+ I D G   +  +++ L+  + K  EV +A  L E M    +  +  TF +L+ G
Sbjct: 337 RKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWG 396

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K  R++ + +L   +  SG   D+++YDV++  LC   +L+ A++L  E+   G+T  
Sbjct: 397 HYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLS 456

Query: 240 FEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
               + LI + S  G  +       I         +  CNS++  L   G + +A  LL 
Sbjct: 457 VVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLY 516

Query: 298 AMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            M+ KG PI                 N  ++ ++++   K   L+ A  L++EM + G  
Sbjct: 517 RMLEKGFPI-----------------NKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY 559

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   +  LIDGL  +  +EE+YE+  EM   GF P +F  NS+ R LC    V  AL L
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++MR +G         ++I   C+ G+   A     DM + G LPDI  ++  IGG   
Sbjct: 620 EKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCK 679

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +  A E+   + + G  PD+  YN  + G C+ +++ +A  + +++I+ G++P   T
Sbjct: 680 AFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVT 739

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN +++G C S  +D+AM+  +++L K    P+VIT   L+   C  G P+ A++   ++
Sbjct: 740 YNTMLSGIC-SDILDRAMILTAKLL-KMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKL 797

Query: 597 EEKGCAPNRITFMALITGLC 616
            E     + I++  L    C
Sbjct: 798 REISFGFDEISYRILDQAYC 817



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 226/550 (41%), Gaps = 59/550 (10%)

Query: 125 NEIIDHGW-------VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           N+I+D  W        D  V + LL  F   G   +A E++  M    +R    +  +L+
Sbjct: 160 NKIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILL 219

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
              ++        +LF  M   G       ++ +I G C+  ++ +   L   M     +
Sbjct: 220 RLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCS 279

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           PD    + LI +C   G         W                           A + L 
Sbjct: 280 PDVVTFNILINACCIGGR-------TW--------------------------VAIDWLH 306

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M++       GVE          P+ ++F  I++ L ++G +  A  LF  +  +G   
Sbjct: 307 LMVRS------GVE----------PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAP 350

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N  +YN L+DG   +  + ++  L  EM  +G  P   T N +     +   +  +  L+
Sbjct: 351 NAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLL 410

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           + + V G         +++  LC  G+  EA + L +++++G    +V +++ IG     
Sbjct: 411 KDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRA 470

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              D A E +R +   G  P     N ++ GLC+   + EA  L   M+ KG   +   Y
Sbjct: 471 GLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAY 530

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            +L++G+ K  N++ A      M  KE G  PD + +T LIDGL  AG  ++A  ++ EM
Sbjct: 531 TVLLDGYFKMNNLEGAQFLWKEM--KERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM 588

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
              G  PN   + +LI GLC C R   AL   + M++KG+  D F F  +I  F      
Sbjct: 589 SAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQM 648

Query: 657 PLAFEVLKEM 666
             A E   +M
Sbjct: 649 KFAIETFLDM 658



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/413 (20%), Positives = 187/413 (45%), Gaps = 17/413 (4%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           RI     L +D++ S  F+       ++  L   G ++EA  L  ++  +GL + +  ++
Sbjct: 402 RIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTL-SVVAF 460

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+ A  ++   D      + M   G+     T   LL   C  G   +A  +   +++
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G+ +++  +++LL  + K   ++ A  L + M +  I  +   F  LI G  K   V++
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE 580

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A ++F +M+  GF  +   Y+ +I GLC   ++  AL+L  EM+  G+  D    + +I 
Sbjct: 581 AYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIID 640

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                G++   ++   + + +     L   I    +  G   +A++++ A   GE +   
Sbjct: 641 GFCRRGQMKFAIETFLDMQRIG----LLPDIFTFNILIGGYCKAFDMVGA---GEIVNK- 692

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                 ++   + P+ ++++  ++   +  K++ A+ +  ++   G + +   YN ++ G
Sbjct: 693 ------MYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSG 746

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +C S+ L+ +  L  ++ + GF P   T N +    C++     AL   +K+R
Sbjct: 747 IC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLR 798


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 262/564 (46%), Gaps = 31/564 (5%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +P     L+R       + E    F  +K +GLCV  N + N LL  L K   VDL 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN-ACNSLLGGLVKVGWVDLA 81

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
               +E+   G   + YTL  ++   C + + +   S  +++ + G + D   ++ L+ A
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + + G +++A EL++ M    ++    T+  +I+G  K  +  +A  + D+M K G + D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
            A Y++++   C+N  +  A +++ EM   G+ PD    S LI   S  G L   +K   
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF- 260

Query: 265 EDRDVNTMTLLC-NSIMRILVS----NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG- 318
             RD+    L   N I  IL+     NG + +A  +   M++   + DV V    I  G 
Sbjct: 261 --RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV-VTYNTILNGL 317

Query: 319 -------------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                               V P+  +F  +IN   KDG ++ A++LF  M Q     +V
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 377

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LIDG C  + +E+  EL  +M      P H +   +    C    V  A  L  +
Sbjct: 378 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G E  +     ++K  C+ G A++A  FL++M+ +G +PD + Y+  I G I  + 
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A  L   +   G  PDV+ YN+I++G  +  R+ EAE +  +MI +G+ P  +TY  
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 557

Query: 540 LINGWCKSGNIDQAMLCLSRMLEK 563
           LING     N+ +A      ML++
Sbjct: 558 LINGHVTQNNLKEAFRVHDEMLQR 581



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 259/555 (46%), Gaps = 30/555 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+  + +  ++ + CE    +    + ++      L+ G VK   VD A +++ ++
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG   +    +++I  LCKN+++E      S+M+  G+ PD    + LI +   +G  
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG-- 146

Query: 257 TLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             L++E +E       + +       N+I+  L   G   +A  +L  M+K     D   
Sbjct: 147 --LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 311 EMLMIFK-------------------GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
             +++ +                     V P+  SF  +I  L K+G LD AL  FR+M 
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +  +Y  LI G C +  + E+ ++  EM E G      T N++   LC+ + + 
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 324

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L  +M  +G  P     T LI    K G   +A      M+Q    PD+V Y+  I
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 384

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      ++   EL+ D+ +    P+ ++Y I+I+G C    V+EA  L++EM+ KG  
Sbjct: 385 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 444

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            ++ T N ++ G+C++GN  +A   LS ML K    PD ITY TLI+G       D A  
Sbjct: 445 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-GIVPDGITYNTLINGFIKEENMDRAFA 503

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L N+ME  G  P+ IT+  ++ G  +  R + A +    M E+G+ PD   + +LI+  +
Sbjct: 504 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 563

Query: 652 SELNPPLAFEVLKEM 666
           ++ N   AF V  EM
Sbjct: 564 TQNNLKEAFRVHDEM 578



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 226/498 (45%), Gaps = 50/498 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N   F +L+  +V+  ++ +  + F  +   G        + ++GGL K   +++A ++Y
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            E+  SG+                                VN  TL  N ++  L  N  
Sbjct: 86  QEVVRSGV-------------------------------QVNVYTL--NIMINALCKNQK 112

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           I+   + L  M +               KG V P+  +++ +IN   + G L+ A  L  
Sbjct: 113 IENTKSFLSDMEE---------------KG-VFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M+  G    VF YN +I+GLC + +   +  +L EM + G  P   T N +    CR  
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +++ A  +  +M  QG  P +   + LI  L K+G   +A ++  DM   G  PD V Y+
Sbjct: 217 NMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYT 276

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             IGG      +  AL++  ++   GC  DVV YN I++GLCK + ++EA++LF EM  +
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P   T+  LING+ K GN+++A+     M+++    PDV+TY TLIDG C     + 
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEMEK 395

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              LWN+M  +   PN I++  LI G C       A   +  M EKG +  +     ++ 
Sbjct: 396 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 455

Query: 649 AFLSELNPPLAFEVLKEM 666
            +    N   A E L  M
Sbjct: 456 GYCRAGNAVKADEFLSNM 473



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 230/534 (43%), Gaps = 53/534 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M + L + ++I   +    D+ +   F        LI      GL+EEA  L D +  +G
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L  P  ++YN ++  LCK+      +  L EM   G   D  T   LL   C +     A
Sbjct: 163 L-KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 221

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+E+   G V + V FS L+   SK G +D+A +    M +  +  +   + +LI G
Sbjct: 222 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 281

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   + +AL++ D+M + G   D   Y+ I+ GLCK K L  A +L++EM   G+ PD
Sbjct: 282 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 341

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           F   + LI   S +G                                 ++++A  L + M
Sbjct: 342 FYTFTTLINGYSKDG---------------------------------NMNKAVTLFEMM 368

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+                  + P+  +++ +I+   K  +++    L+ +M       N 
Sbjct: 369 IQR----------------NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 412

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LI+G CN   + E++ L  EM E GF+ T  T N++ +  CR  + V A   +  
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472

Query: 420 MRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M ++G  P  + +NTL I    K      AF  +  M   G LPD++ Y+  + G     
Sbjct: 473 MLLKGIVPDGITYNTL-INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           R+  A  +   +   G  PD   Y  +I+G      + EA  + +EM+ +G +P
Sbjct: 532 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 3/358 (0%)

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           VE L++  G    N   FD+++ T ++  KL      FR +   G   ++   N+L+ GL
Sbjct: 13  VESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 72

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
                ++ ++E+ +E+  SG +   +TLN M   LC+ Q +    + +  M  +G  P V
Sbjct: 73  VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 132

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                LI   C+ G   EAF  +  M  +G  P +  Y+A I GL    +   A  +  +
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  PD   YNI++   C+   + +AE +F+EM ++G++P + +++ LI    K+G 
Sbjct: 193 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252

Query: 550 IDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +DQA+     M  K +G +PD + YT LI G C  G   +A+ + +EM E+GC  + +T+
Sbjct: 253 LDQALKYFRDM--KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             ++ GLCK      A   F  M E+G+ PD + F  LI+ +  + N   A  + + M
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 278/644 (43%), Gaps = 61/644 (9%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           ++  G  G V+EA  +F+++     C P  +SYN ++  L  S   D        M+D G
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
              D Y+ T  ++ +C + +   AL + N +   G  ++   +  ++  F +    D+  
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           EL  +M    + L   TF  L+H   KK  V +  +L DK+ K G   +   Y+  I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVN 270
           C+  +L+ A+++   +   G  PD    + LI      S   E E+  L K + E  + +
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEV-YLGKLVNEGLEPD 320

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           + T   N+++      G +  A  +L               +  +F G V P+  ++  +
Sbjct: 321 SFTY--NTLIAGYCKGGMVQLAERIL---------------VNAVFNGFV-PDEFTYRSL 362

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L  +G+ + AL+LF E    G   NV LYN LI GL N   + E+ +L  EM E G 
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N +   LC+   V  A  LV+ M  +G+ P +    +LI       K   A  
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L  M+  G  PD+  Y++ + GL    + +  +E ++ +   GC P++  +NI++  LC
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--- 567
           +  ++ +A  L  EM  K + P   T+  LI+G+CK+G++D A     +M E    S   
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602

Query: 568 --------------------------------PDVITYTTLIDGLCIAGRPDDAIMLWNE 595
                                           PD  TY  ++DG C  G  D       E
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLE 662

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           M E G  P+  T   +I  LC  DR   A      M +KG+ P+
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 278/618 (44%), Gaps = 54/618 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDKYTLTPLLQV 110
           +F+ +++E        +Y  ++E L      + +E  L +M Q+ G    +      ++ 
Sbjct: 26  MFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKN 85

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRL 168
           Y   G+  +A++VF E +D    +  VFS   ++      G  D+A ++  RM D  I  
Sbjct: 86  YGRKGKVQEAVNVF-ERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITP 144

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  +F + +  F + SR   AL+L + M+  G   +   Y  ++GG  +    +   +L+
Sbjct: 145 DVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELF 204

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            +M  SG++      +KL                                 + +L   G 
Sbjct: 205 GKMLASGVSLCLSTFNKL---------------------------------LHVLCKKGD 231

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +   LL  +IK               +G V PN  +++  I  L + G+LD A+ +  
Sbjct: 232 VKECEKLLDKVIK---------------RG-VLPNLFTYNFFIQGLCQKGELDAAVRMVG 275

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            +   G   +V  YN LI GLC +++ +E+   L ++   G +P  FT N++    C+  
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A  ++      G  P       LI  LC  G+   A     + + +G  P+++ Y+
Sbjct: 336 MVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I GL +   +  A +L  ++   G  P+V  +NI+++GLCK   V++A+ L   MI+K
Sbjct: 396 TLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G  P + T+N+LI+G+     ++ A+  L  M++     PDV TY +L++GLC   + +D
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN-GVDPDVYTYNSLLNGLCKTSKYED 514

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            +  +  M EKGCAPN  TF  L+  LC+  +   AL     MK K + PD   F  LI 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 649 AFLSELNPPLAFEVLKEM 666
            F    +   A+ + ++M
Sbjct: 575 GFCKNGDLDGAYTLFRKM 592



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 229/511 (44%), Gaps = 25/511 (4%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERM 161
           T   LL V C  G   +   + +++I  G +     ++  +    + GE+D A  ++ R+
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D   + +  T+  LI+G  K S+  +A     K+   G   D+  Y+ +I G CK   +
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSI 279
           ++A ++      +G  PD      LI     EGE    +    E   + +    +L N++
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++ L + G I +A  L   M +               KG + P   +F+I++N L K G 
Sbjct: 398 IKGLSNQGLILEAAQLASEMSE---------------KGLI-PEVQTFNILVNGLCKMGC 441

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A  L + M   G   ++F +N LI G     ++E + E+L  M ++G  P  +T NS
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+       +   + M  +G  P +    +L++ LC++ K  +A   L +M  + 
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFR---DICAHGCCPDVVAYNIIISGLCKAQRVA 516
             PD V +   I G      +D A  LFR   ++    C      YNIII    +   V 
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVT 619

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE LF EM+ + L P   TY L+++G+CK+GN+D     L  M+E     P + T   +
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMEN-GFIPSLTTLGRV 678

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           I+ LC+  R  +A  + + M +KG  P  + 
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 255/576 (44%), Gaps = 40/576 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S    +R  A LR+L  ++    C M+  A   ++         +E   LF ++   G
Sbjct: 153 MKSFCRTSRPHAALRLL-NNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG 211

Query: 61  --LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
             LC+    ++N LL  LCK   V   E  L ++   G   + +T    +Q  C  G+ D
Sbjct: 212 VSLCLS---TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A+ +   +ID G   + V ++ L+    K  +  +A   + ++ +  +  +  T+  LI
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G+ K   V  A ++      +GF  D   Y  +I GLC   +   AL L++E  G GI 
Sbjct: 329 AGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 238 PDFEILSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQ 291
           P+  + + LI   S++G   E   L  E+ E     +V T  +L N + ++    G +  
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKM----GCVSD 444

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L++ MI                KG   P+  +F+I+I+      K++ AL +   M 
Sbjct: 445 ADGLVKVMIS---------------KGYF-PDIFTFNILIHGYSTQLKMENALEILDVMM 488

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +V+ YN+L++GLC +++ E+  E  + M E G  P  FT N +   LCR   + 
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC----Y 467
            AL L+ +M+ +   P       LI   CK+G    A+     M +E ++  + C    Y
Sbjct: 549 KALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEVYM--VSCSTPTY 605

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I    +   V +A +LF+++      PD   Y +++ G CK   V        EM+ 
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME 665

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            G IPS+ T   +IN  C    + +A   + RM++K
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 215/514 (41%), Gaps = 96/514 (18%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +LI  L      +EA +   ++  EGL  P++++YN L+   CK   V L E  L     
Sbjct: 291 YLIYGLCKNSKFQEAEVYLGKLVNEGL-EPDSFTYNTLIAGYCKGGMVQLAERILVNAVF 349

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-------------------------- 128
            G+  D++T   L+   C+ G+ ++AL++FNE +                          
Sbjct: 350 NGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILE 409

Query: 129 ---------DHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                    + G + E   F+IL+    K G V  A  L++ M       +  TF +LIH
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+  + +++ AL++ D M  +G   D   Y+ ++ GLCK  + E  ++ Y  M   G  P
Sbjct: 470 GYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAP 529

Query: 239 DFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +    + L+ S     +L   L + E  +++ VN   +   +++     NG +D AY L 
Sbjct: 530 NLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M           E+ M     VS +T +++III+   +   + +A  LF+EM      
Sbjct: 590 RKM----------EEVYM-----VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + + Y  ++DG C +  ++  Y+ L EM E+GF P+  TL  +  CLC    V  A  +
Sbjct: 635 PDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + +M                                   VQ+G +P+      A+  + D
Sbjct: 695 IHRM-----------------------------------VQKGLVPE------AVNTIFD 713

Query: 477 IKRVDLAL-ELFRDICAHGCCPDVVAYNIIISGL 509
             + ++A  +L  +      C    AY ++  GL
Sbjct: 714 HDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 170/671 (25%), Positives = 286/671 (42%), Gaps = 61/671 (9%)

Query: 54  DQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN 113
           D++  +GL + +   YN L+   C++  VD     L  M++ G   +  T TP +  YC 
Sbjct: 193 DRMTAQGLPM-DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 114 SGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           +   ++A  ++  ++ +G  +D    S L+    + G   +A  L   MD      N  T
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASD---------------------------- 204
           +C LI    K  R  + L L  +M   G   D                            
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 205 -------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
                     Y V+I  LCK   ++ A Q+  EM+   I+P+    S +I      G   
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 255 ---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGV 310
              E   ++KE   + +V T   L +   +    + +++  +++L   +K  + I D  V
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 311 ----------EMLMIFKGTVSPNTS----SFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                     E + +FK       S    ++  +I+ L K G +  A    +E+     +
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +  +YN  I+ LC   + +E+   L EM   G KP   T N+M    CR+ +   AL L
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 417 VRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           + +M++   +P  + +NTL +  L   G   +A   L +MV  GF P  + +   +    
Sbjct: 612 LHEMKMSSIKPNLITYNTL-VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             +R+D+ L++   +   G   D+  YN ++  LC      +A  +  EM+  G+ P   
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           T+N LI G CKS ++D A    ++ML +   SP++ T+ TL+ GL   GR  +A  +  E
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNI-SPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           ME+ G  PN +T+  L TG  K      A+  +  M  KG  P +  + ALIS F     
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 656 PPLAFEVLKEM 666
              A E+ K+M
Sbjct: 850 MTQAKELFKDM 860



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 266/630 (42%), Gaps = 37/630 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +YN LL AL        V   L EM   G  +D  T+  LL   C +GQ D A ++
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 124 FNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +       W+     ++ L+  + +G+   A  + +RM    + ++   +  L+ GF +
Sbjct: 158 ADRAGGITPWMSS-AGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +VD A  + D M ++G   + A Y   I   C+ K +E A  LY  M  +G+  D   
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 243 LSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           LS L+     +G   E   L +E+ +          C +++  L   G   +  +LL  M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC-TLIDSLAKAGRGKELLSLLGEM 335

Query: 300 IKGEPIAD-VGVEMLMIFKG------------------TVSPNTSSFDIIINTLLKDGKL 340
           +    + D V    LM + G                   +SPN  ++ ++I+ L K   +
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  +  EM +     NV  ++++I+G      L+++ E  R M+E G  P   T  ++
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC----KHGKAMEAFRFLTDMV 456
                + Q    AL +   M  +G    VK N  ++  L     ++GK  EA     D  
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEG----VKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G   D V Y+  I GL     +  A +  +++      PD V YN+ I+ LC   +  
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA+    EM   GL P  +TYN +I   C+ G   +A+  L  M +  S  P++ITY TL
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM-KMSSIKPNLITYNTL 630

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + GL   G  + A  L NEM   G +P+ +T   ++    +  R    L     M   G+
Sbjct: 631 VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             D+ V+  L+           A  VL+EM
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 256/599 (42%), Gaps = 59/599 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A R   L  L  ++V     M       L+  LG  G  +E          + L  P
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS-P 377

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L++ALCK+ +VD  E  L EM++     +  T + ++  +   G  DKA + +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEY 436

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++    ++ +V  +  L+  F K+   D A E+   M    +++N+     L++G  +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 183 KSRVDKALQLFDKMTKSGFA-----------------------------------SDAAM 207
             ++++A+ LF   + SG +                                    DA +
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+V I  LC   + + A    +EM+  G+ PD    + +I S   +GE    +K + E +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +    +  N+++  L   G++++A  LL  M+                    SP++ 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA----------------GFSPSSL 660

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +   ++    +  +LD+ L +   M   G   ++ +YN L+  LC      ++  +L EM
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             SG  P   T N++    C+   +  A     +M  Q   P +     L+  L   G+ 
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSA-AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            EA   L +M + G  P+ + Y   A G      +V+ A+ L+ ++   G  P V  YN 
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE-AMRLYCEMVGKGFVPKVSTYNA 839

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +IS   KA  + +A++LF +M  +G+ P+  TY++L++GW +  N  +   CL  M EK
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEK 898



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 108/491 (21%), Positives = 205/491 (41%), Gaps = 51/491 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G +EEA  LF      GL + ++ +Y  L++ L K+  +       +E+ D 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSL-DHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D       +   C  G+F +A S   E+ + G   D+  ++ ++V+  + GE  KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  M   +I+ N  T+  L+ G      V+KA  L ++M  +GF+  +  +  ++  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             ++++L++ L ++  M  +G+  D  +                                
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVY------------------------------- 697

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++++L  +G   +A  +L+ M+ G  IA               P+T +F+ +I   
Sbjct: 698 --NTLLQVLCYHGMTRKATVVLEEML-GSGIA---------------PDTITFNALILGH 739

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   LD A + + +M       N+  +N L+ GL +  R+ E+  +L EME+SG +P +
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T + +     ++ + V A+ L  +M  +G  P V     LI +  K G   +A     D
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M + G  P    Y   + G   I+      +  +D+   G  P     + I     K   
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 515 VAEAEDLFNEM 525
             +A+ L   +
Sbjct: 920 TWQAQRLLKNL 930


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 233/533 (43%), Gaps = 65/533 (12%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++IL+  F   GE+ K       M+      N  T+  LI  + K  R+D+A  L   
Sbjct: 11  YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M+  G   +   Y+VII GLC+   ++ A ++  EM   G TPD    + L+     EG 
Sbjct: 71  MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG- 129

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                                                 N  QA++       +  EM+  
Sbjct: 130 --------------------------------------NFHQALV-------IHAEMV-- 142

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +  VSP+  ++  +IN++ K   L+ A+  F +M   G   N   Y  LIDG      L
Sbjct: 143 -RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 201

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+Y +L EM ESGF P+  T N+     C  + +  AL +V++M  +G  P V   + +
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   C+ G+   AF+   +MV++G  PD V YS+ I GL +++R+  A +L +++   G 
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD   Y  +I+  C    + +A  L +EMI KG +P   TY++LING  K     +A  
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381

Query: 556 CLSRMLEKESGSPDVITYTTLID---------------GLCIAGRPDDAIMLWNEMEEKG 600
            L +++ +ES  P  +TY TLI+               G C+ G   +A  ++  M E+ 
Sbjct: 382 LLFKLIYEES-VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             P    +  +I G C+      A   ++ M   G  P     + LI A   E
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 184/353 (52%), Gaps = 3/353 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + +  VSPN  +++I+I      G+L   L  F EM + GC+ NV  YN LID  C   R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNT 433
           ++E++ LL+ M   G +P   + N +   LCR   +  A  ++ +M  +G  P  V +NT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           LL    CK G   +A     +MV+ G  P +V Y+A I  +   + ++ A+E F  +   
Sbjct: 121 LL-NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+   Y  +I G  +   + EA  + NEM   G  PSV TYN  I+G C    +++A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  +  M+EK   +PDV++Y+T+I G C  G  D A  +  EM EKG +P+ +T+ +LI 
Sbjct: 240 LGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLC+  R   A    + M + G+ PD F +  LI+A+  E +   A  +  EM
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 225/521 (43%), Gaps = 100/521 (19%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +S  + +   Y+++I G C   +L+  L  + EM+ +G  P+                
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPN---------------- 44

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                             +  N+++      G ID+A+ LL++M                
Sbjct: 45  -----------------VVTYNTLIDAYCKMGRIDEAFGLLKSMSS-------------- 73

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG + PN  S+++IIN L ++G +  A  +  EM   G   +   YN L++G C     
Sbjct: 74  -KG-MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++  +  EM  +G  P+  T  ++   +C+ +++  A+    +MR++G  P  +  T L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I    + G   EA+R L +M + GF P +V Y+A I G   ++R++ AL + +++   G 
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PDVV+Y+ IISG C+   +  A  +  EM+ KG+ P   TY+ LI G C+   + +A  
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               ML+     PD  TYTTLI+  C+ G  + A+ L +EM  KG  P+ +T+  LI GL
Sbjct: 312 LSQEMLDM-GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 616 CKCDRPRAA---------------------------------------------LVH--- 627
            K  R R A                                             L+H   
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 628 --FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F  M E+  KP   V+  +I       N P AF + KEM
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 229/506 (45%), Gaps = 45/506 (8%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
           YT   L++ +C+ G+  K L  F E+  +G +   V ++ L+ A+ K G +D+A  L++ 
Sbjct: 11  YTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M    ++ N  ++ V+I+G  ++  + +A ++ ++M   GF  D   Y+ ++ G CK   
Sbjct: 71  MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTL 274
              AL +++EM  +G++P     + LI S      L   ++   + R      +  T T 
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L +   R     G +++AY +L  M                 +   SP+  +++  I+  
Sbjct: 191 LIDGFSR----QGLLNEAYRILNEMT----------------ESGFSPSVVTYNAFIHGH 230

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
               +++ AL + +EM + G   +V  Y+ +I G C    L+ ++++ +EM E G  P  
Sbjct: 231 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 290

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T +S+ + LC  + +  A +L ++M   G  P     T LI   C  G   +A     +
Sbjct: 291 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 350

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI---------- 504
           M+ +GFLPD V YS  I GL    R   A  L   +      P  V Y+           
Sbjct: 351 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF 410

Query: 505 -----IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
                +I G C    + EA+ +F  M+ +   P  A YN++I+G C+ GN+ +A      
Sbjct: 411 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 470

Query: 560 MLEKESG-SPDVITYTTLIDGLCIAG 584
           M+   SG  P  +T  TLI  L   G
Sbjct: 471 MI--HSGFVPHTVTVITLIKALFKEG 494



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 151/613 (24%), Positives = 252/613 (41%), Gaps = 109/613 (17%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +++SR   +      LIR   SVG +++    F +++R G C+PN  +YN L++A CK  
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNG-CLPNVVTYNTLIDAYCKMG 59

Query: 81  SVDLVEMRLKEMQDYG------------------------W------GY-----DKYTLT 105
            +D     LK M   G                        W      GY     D+ T  
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            LL  YC  G F +AL +  E++ +G     V ++ L+ +  K   +++A E  ++M   
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +R NE+T+  LI GF ++  +++A ++ ++MT+SGF+     Y+  I G C  +++E A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L +  EM   G+ PD    S +I+    +GEL                            
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL---------------------------- 271

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                D+A+ + Q M++               KG VSP+  ++  +I  L +  +L  A 
Sbjct: 272 -----DRAFQMKQEMVE---------------KG-VSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L +EM  +G   + F Y  LI+  C    L ++  L  EM   GF P   T + +   L
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 405 CRRQDVVGALNLVRKMRVQGHEPW-VKHNTL--------------LIKELCKHGKAMEAF 449
            ++     A  L+ K+  +   P  V ++TL              LIK  C  G   EA 
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R    MV+    P    Y+  I G      +  A  L++++   G  P  V    +I  L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK------ 563
            K     E  ++  + +    +       +L+    K GN+ +A+L +SR+  K      
Sbjct: 491 FKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNM-EAVLNVSRLYNKLSLKCV 549

Query: 564 -ESGSPDVITYTT 575
             S  P  +T T+
Sbjct: 550 ASSVPPGALTQTS 562


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 264/561 (47%), Gaps = 33/561 (5%)

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           K  L   +  Y  SGQ   A  +F ++    +    +  +     LV +     V  + E
Sbjct: 135 KALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSRE 194

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                    I  N  TF ++I+G+  +++   A++  + M K   + D   Y+ I+  LC
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLC 254

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR---DVN 270
           K  +L  A  L  +MK  G+ P+    + L+      G   E   +++ + ++    DV 
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +L N     L + G I++A+ L   M           E L +      P+  S++ +
Sbjct: 315 TYNMLING----LCNEGRIEEAFKLRDEM-----------ENLKLL-----PDVVSYNTL 354

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN  L+  K+  A  L  EM++ G   N   +N ++   C   +++++   + +MEESGF
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            P   T N++    C+  ++  A   + +M R       V  NT+L + LC+  K  EA+
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL-RTLCREKKLEEAY 473

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L+   + G+  D V Y   I G      VD AL+L+ ++      P  V YN II GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+  +  +A    NE++  GL+P   TYN +++G+C+ G++++A    ++M+E  S  PD
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPD 592

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V T   L+ GLC+ G  + A+ L+N    KG A + +T+  LIT LCK  R   A     
Sbjct: 593 VFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 630 MMKEKGMKPDMFVFVALISAF 650
            M+EK + PD + + A+I+A 
Sbjct: 653 EMEEKELGPDHYTYNAIITAL 673



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 264/560 (47%), Gaps = 34/560 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+N +YN +L+ LCK   +      L +M+  G   ++ T   L+  YC  G   +A 
Sbjct: 239 CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +V   +  +  + D   +++L+      G +++A +L + M++  +  +  ++  LI+G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           ++ S++ +A +L ++M++ G   +A  +++++   CK  +++ A    ++M+ SG +PD 
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ- 297
              + LI      G +    + + E   +++   ++  N+I+R L     +++AY LL  
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           A  +G  I +V                 S+  +I    KDG +D AL L+ EM +   + 
Sbjct: 479 ARKRGYFIDEV-----------------SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   YN +I GLC   + E++   L E+ ESG  P   T N++    CR  DV  A    
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            KM     +P V    +L++ LC  G   +A +     V +G   D V Y+  I  L   
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            R+D A  L  ++      PD   YN II+ L  + R+ EAE+  ++M+ KG +P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL- 700

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
                       +D+    ++    +ES S  V  Y+  I  LC  G+  DA+ ++ E +
Sbjct: 701 -----------QLDKNETVVTSETSEESDSSSV-AYSEWIKELCTEGKYKDAMRIFGESK 748

Query: 598 EKGCAPNRITFMALITGLCK 617
           +KG   ++ T++ L+ GL K
Sbjct: 749 QKGITVDKSTYINLMDGLIK 768



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/670 (24%), Positives = 278/670 (41%), Gaps = 113/670 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD---YGWGYD 100
           G    A  +F ++KR  L  PN  + N LL +L +  S   V    +   D    G   +
Sbjct: 149 GQPHHAFQIFKKMKRLRL-RPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPN 207

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   ++  YC   +F  A+   N +  +    ++V ++ +L    K G +  A +L+ 
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  N  T+ +L++G+ K   + +A  + + MT++    D   Y+++I GLC   
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A +L  EM+   + PD    + LI  C +           W               
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE-----------W--------------- 361

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                    I +A+ LL+ M +               KG V PN  + +I++    K+GK
Sbjct: 362 -------SKISEAFKLLEEMSE---------------KG-VKPNAVTHNIMVKWYCKEGK 398

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A +   +M + G   +   YN LI+G C +  + E++  + EM     K    TLN+
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLI--------------------KE 438
           + R LCR + +  A  L+   R +G+    V + TL++                    KE
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 439 --------------LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                         LC+ GK  +A   L ++++ G LPD   Y+  + G      V+ A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +    +  +   PDV   NI++ GLC    + +A  LFN  ++KG      TYN LI   
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +D A   LS M EKE G PD  TY  +I  L  +GR  +A    ++M EKG  P+
Sbjct: 639 CKEGRLDDAFNLLSEMEEKELG-PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697

Query: 605 RI-----------------------TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           ++                        +   I  LC   + + A+  F   K+KG+  D  
Sbjct: 698 QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 642 VFVALISAFL 651
            ++ L+   +
Sbjct: 758 TYINLMDGLI 767



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 63/366 (17%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R +++     L     K   F+   + G LI      G V+ A  L+D++K + + +P
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI-IP 521

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YNC++  LC+    +    +L E+ + G   D+ T   +L  YC  G  +KA    
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           N+++++ +  + VF+                        CNI         L+ G   + 
Sbjct: 582 NKMVENSFKPD-VFT------------------------CNI---------LLRGLCMEG 607

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++KAL+LF+     G A D   Y+ +I  LCK  +L+ A  L SEM+   + PD    +
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI-DQAYNLLQAMIKGE 303
            +IT+ +D G     ++E  E              M  ++  G++ DQ   L     K E
Sbjct: 668 AIITALTDSGR----IREAEE-------------FMSKMLEKGNLPDQVLQL----DKNE 706

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            +                    ++   I  L  +GK   A+ +F E  Q G   +   Y 
Sbjct: 707 TVVTSETSEESDSSSV------AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 364 NLIDGL 369
           NL+DGL
Sbjct: 761 NLMDGL 766


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 181/738 (24%), Positives = 315/738 (42%), Gaps = 108/738 (14%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKE 91
              LI  L S G V++A  LFD + R GL  P    Y  L  A CK+  S+D  +M  + 
Sbjct: 120 FALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRV-YRSLAFAYCKARRSLDASDM-CQL 177

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWG 149
           M   G   D+   T L++V+C  G+ + AL VF  +   +H  +D + ++ ++    + G
Sbjct: 178 MLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHG 237

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VD   ++   M D  I+ +  T+ V+I  + K   V  A+ ++  M ++G A D   Y 
Sbjct: 238 RVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYT 297

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI--------------------------- 242
           +++  LCK+ +L  A  L+ +M  SG+ PD  +                           
Sbjct: 298 ILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKL 357

Query: 243 --------LSKLITSCSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                   LS L   CS+   + E   L+ EI    +V  + ++ N ++  + S G +D 
Sbjct: 358 DCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTS-NVLPVNIVLNLMIIAMCSEGRLDV 416

Query: 292 AYNLLQAMIKG--EP-----------------IADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +Y LL  ++    EP                 + D    + ++    V P+ S+  I++ 
Sbjct: 417 SYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVT 476

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K G+++ AL LF EM + G   ++ +Y+++I  LC   RL+E+   LR+M   G  P
Sbjct: 477 AYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAP 536

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                 S+       +       +  +M  +G +P       LI  L K  K  +A  +L
Sbjct: 537 DEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYL 596

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK- 511
             M++EG  P  V Y+  I        V L L+L   +      PD++ Y  +++G+C+ 
Sbjct: 597 ERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRN 656

Query: 512 ----------AQRVAEAEDLFNEMITK--------------------------------- 528
                     A+++ EA  +   M+ +                                 
Sbjct: 657 IARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEEN 716

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G++P +  YN +ING C++  +D A   LS M ++    P+ +TYT L++     G  + 
Sbjct: 717 GMVPDLHIYNGMINGLCRANKMDDAYSLLSVM-DQTGILPNHVTYTILMNNQIRLGDINH 775

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           AI L+N +   GC  ++IT+   I GL    R + AL    MM ++G  P    +  L+ 
Sbjct: 776 AIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLME 835

Query: 649 AFLSELNPPLAFEVLKEM 666
             L+E    +  ++ ++M
Sbjct: 836 LLLAENAIDIVLQLFEDM 853



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 224/507 (44%), Gaps = 43/507 (8%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C+ G+ D +  +  +++ +G     + ++I++    +   +D A  LI  M    +R + 
Sbjct: 409 CSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDM 468

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T  +++  + K   ++ AL LF +M K G     A+YD II  LC+ ++L+ A     +
Sbjct: 469 STNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQ 528

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G+ PD  I + LI   S    LT         R    +  + + +++  +  G   
Sbjct: 529 MIREGLAPDEIIYTSLINGYS----LT---------RQTRNVCRIFDEMLKRGLQPGP-- 573

Query: 291 QAY-NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            AY +L+  ++KG  I      +  + +  ++P T  + ++IN   + G + L L L   
Sbjct: 574 HAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVL 633

Query: 350 MTQIGCMQNVFLYNNLIDGLC-NSNRLEESYELLREMEESGFKPTHFTLNSMFRCL---- 404
           M +     ++  Y  L+ G+C N  R      L ++++E+ +         +FR L    
Sbjct: 634 MMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYM--------LFRMLPQII 685

Query: 405 ------------CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                       C  + +  A  +++ +   G  P +     +I  LC+  K  +A+  L
Sbjct: 686 DTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLL 745

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
           + M Q G LP+ V Y+  +   I +  ++ A++LF  + + GC  D + YN  I GL  A
Sbjct: 746 SVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLA 805

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA      M  +G +PS A+Y+ L+        ID  +     ML  +  +P    
Sbjct: 806 GRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDML-FQGYTPRYAN 864

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           YT+L+  L   GR  +A  ++  M +K
Sbjct: 865 YTSLLLVLAKDGRWSEADRIFTMMLKK 891



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 2/260 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P     +++  C  R  D+  AL+   ++   G  P       L++ +C    + EA   
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 452 LT-DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           L   M     LP +  ++  I GL     VD A  LF  +   G  P V  Y  +    C
Sbjct: 105 LVLSMGNPSPLP-VSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           KA+R  +A D+   M+ KG+         LI  +C+ G ++ A+    RM   E    D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
             YTT+I GL   GR D  + +++EM ++G  P+  T+  +I   CK     AA+  +++
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKV 283

Query: 631 MKEKGMKPDMFVFVALISAF 650
           M   G+ PD+  +  L+++ 
Sbjct: 284 MIRTGVAPDLRCYTILMASL 303



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 1/171 (0%)

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD    + +++   +   ++ A   F+ ++  G  PS A+   L+   C +    +AM 
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L   +   S  P V  +  LI GLC  G  D A  L++ M   G  P    + +L    
Sbjct: 104 VLVLSMGNPSPLP-VSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAY 162

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  R   A    ++M  KGM  D  +  ALI  F  E     A +V + M
Sbjct: 163 CKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRM 213


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 270/601 (44%), Gaps = 59/601 (9%)

Query: 27  FMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           F  P +L FL  C        +A   FD + R    +P   S+N LL  L K      + 
Sbjct: 54  FHHPLSL-FLRNCKTGNITAIQAFHFFDLMMRSHP-IPPISSFNRLLGGLAKINHYSQLF 111

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
               EM+  G   D +TL+ L    CN  +  +AL+    I+  G++   V ++ L+   
Sbjct: 112 SLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGL 171

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM----TKSGF 201
                + +A  L  RM       N  T+  LI G  +   V+ AL+L  +M    ++ G 
Sbjct: 172 CMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGV 231

Query: 202 ASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
                +  Y +II GLCK  + + A +L+ EMK  G+ PD    S LI      G+    
Sbjct: 232 NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGK---- 287

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
               W                         DQ+ +L   M+      D GV+        
Sbjct: 288 ----W-------------------------DQSKHLFDEMV------DQGVQ-------- 304

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+  +F ++I+TL K+GK+  A  L   M Q G + N+  YN+LIDG C    L  + 
Sbjct: 305 --PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           EL   M   G +P   +  ++    C+   V  A+NL  +M   G  P V     L+K L
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            + GK  +A +    M   G   +   Y   + GL     +  A+ELF ++ ++    ++
Sbjct: 423 FQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNI 482

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             Y+ +I GLCKA ++  A +LF ++  +GL P V TYN++I+G+CK G +D A +   +
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M E+   +PD+I Y TL+ G C   + ++ I L ++M +K  +PN  +   ++  LCK +
Sbjct: 543 M-EENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDE 601

Query: 620 R 620
           +
Sbjct: 602 K 602



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 234/503 (46%), Gaps = 54/503 (10%)

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A   FD M +S      + ++ ++GGL K         LY+EM+ +G++PD   LS L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
               +             +R    +  +   + R  + N  +     L++ +     I++
Sbjct: 134 NCLCN------------VNRVSEALAAMAGILRRGYIPN--VVTYTTLIKGLCMEHRISE 179

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM----TQIG--CMQNVFL 361
                L + K   +PN  ++  +I  L + G +++AL L +EM    +Q G  C   V  
Sbjct: 180 ATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +IDGLC   R +E+ EL  EM+  G  P   + +++    C       + +L  +M 
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG +P +   ++LI  LCK GK  EA + L  M+Q G +P+++ Y++ I G   +  ++
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A ELF  + + G  PD ++Y  +I+G CK  +V EA +L+NEM+  G  P+V TY  L+
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419

Query: 542 NGWCKSGNIDQAM------------------------LC----------LSRMLEKESGS 567
            G  + G +  A                         LC          L   L+  +  
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK 479

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            ++  Y+ LIDGLC AG+ + A  L+ ++ ++G  P+ +T+  +I G CK  +   A + 
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  M+E G  PD+  +  L+  F
Sbjct: 540 FEKMEENGCTPDIIAYNTLLCGF 562



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 165/330 (50%), Gaps = 7/330 (2%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A   F  M +   +  +  +N L+ GL   N   + + L  EM  +G  P  FTL+ +  
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           CLC    V  AL  +  +  +G+ P V   T LIK LC   +  EA R    M + G  P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 463 DIVCYSAAIGGLIDIKRVDLAL----ELFRDICAHG--CCPDVVAYNIIISGLCKAQRVA 516
           + V Y   I GL     V++AL    E+  D   +G  C P V+ Y+III GLCK  R  
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA++LF EM  +G+IP V +Y+ LI+G+C +G  DQ+      M++ +   PD++T++ L
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD-QGVQPDMVTFSVL 313

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID LC  G+  +A  L   M ++G  PN IT+ +LI G C      +A   F  M  KG+
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +PD   +  LI+ +        A  +  EM
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEM 403



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 180/369 (48%), Gaps = 23/369 (6%)

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA++    M++  PI                P  SSF+ ++  L K        SL+ EM
Sbjct: 74  QAFHFFDLMMRSHPI----------------PPISSFNRLLGGLAKINHYSQLFSLYNEM 117

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   ++F  + L + LCN NR+ E+   +  +   G+ P   T  ++ + LC    +
Sbjct: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF----LTDMVQEGF--LPDI 464
             A  L  +M+  G  P       LIK LC+ G    A +     L D  Q G    P +
Sbjct: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGV 237

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + YS  I GL  + R D A ELF ++ A G  PDV++Y+ +I G C A +  +++ LF+E
Sbjct: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ +G+ P + T+++LI+  CK G + +A   L  M+++    P++ITY +LIDG C+ G
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR-GIVPNLITYNSLIDGFCMVG 356

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             + A  L+  M  KG  P+ I++  LI G CK  + + A+  +  M + G  P++  + 
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416

Query: 645 ALISAFLSE 653
            L+     +
Sbjct: 417 TLLKGLFQK 425



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 200/444 (45%), Gaps = 27/444 (6%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEA-----NMLFDQVKREGLCV 63
            RI+    L   + K  C  +    G LI+ L   G V  A      ML D  +    C 
Sbjct: 175 HRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCK 234

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +Y+ +++ LCK    D  +   +EM+  G   D  + + L+  +C +G++D++  +
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+E++D G   + V FS+L+    K G+V +A +L+E M    I  N  T+  LI GF  
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              ++ A +LF  M   G   D   Y  +I G CK  +++ A+ LY+EM   G +P+   
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQA-------- 292
              L+     +G++    K   + +   V+  + +    +  L  N  + +A        
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474

Query: 293 -YN----------LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            YN          L+  + K   +         + +  + P+  +++I+I+   K G++D
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  LF +M + GC  ++  YN L+ G C  N+LEE  +LL +M +    P   +   + 
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594

Query: 402 RCLCRRQDVVGALNLVRKMRVQGH 425
             LC+ +     ++L+ K  VQ H
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPVQRH 618



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 107/219 (48%), Gaps = 9/219 (4%)

Query: 440 CKHGK--AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
           CK G   A++AF F   M++   +P I  ++  +GGL  I        L+ ++   G  P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+   +I+ + LC   RV+EA      ++ +G IP+V TY  LI G C    I +A    
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG------CAPNRITFMAL 611
            RM +K   +P+ +TY TLI GLC  G  + A+ L  EM          C P  IT+  +
Sbjct: 185 LRM-QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           I GLCK  R   A   F  MK +GM PD+  +  LI  F
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 270/604 (44%), Gaps = 57/604 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S N ++   CK   +D+       M   G  +D ++   LL   C +G  D+AL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +++  HG   + V ++ L   F   G +  A +++++M    +  +  T+  LI G  +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              +++AL+L  +    GF  +   Y++++  LCK  ++E AL L+ EM+   + PDF +
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI     EG                                  + +AY L + M   
Sbjct: 449 YSILIHGLCKEG---------------------------------FVQRAYQLYEQMRLK 475

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                              P+  +   ++  L K+G +  A + F   T++  M++V LY
Sbjct: 476 RKF----------------PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLY 519

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDG    + + E+ +L  +M E G  P+  T N++    CRR D++ A  ++  +R+
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P V   T L+   C+ G   E F FL +M     +P  V Y+  I GL    ++  
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +L+L   + A G  PD V YN II   CK + + +A  L+N M+     P+  TY +LIN
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLIN 699

Query: 543 GWCKSGNIDQAMLCLSRM---LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
             C  G++      + RM   +E  + +   +TY T+I   C  G+   A+  +N+M  K
Sbjct: 700 ALCIFGDLKD----VDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAK 755

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G   +   + A+I  LCK      A   F MM  +G+ PD  +   +++AF  + N    
Sbjct: 756 GFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSV 815

Query: 660 FEVL 663
           FE L
Sbjct: 816 FEFL 819



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 258/603 (42%), Gaps = 55/603 (9%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHG-----------------W- 132
           + +YG+ +  ++   +  +    G+F +  SV  N I+D G                 W 
Sbjct: 108 INEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWD 167

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            +  V+ +L  A+S+   +  A  +I +M D N + +  T+  L+H        D    +
Sbjct: 168 SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDV 224

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY---SEMKGSGITPDFEILSKLI-T 248
           ++++  SG         ++I GLC+  +LE A+      +++ G  I     I+SK    
Sbjct: 225 YNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKV 284

Query: 249 SCSDEGE--LTLLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              D       L+VK  +  D      +   N ++  L   GS+D+A      M K    
Sbjct: 285 GLIDVARSFFCLMVKNGLLHD------SFSYNILLHGLCVAGSMDEALGFTDDMEKHGVE 338

Query: 306 ADV--------GVEMLMIFKGT-----------VSPNTSSFDIIINTLLKDGKLDLALSL 346
            DV        G  +L +  G            ++P+  ++  +I    + G ++ AL L
Sbjct: 339 PDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            +E    G   NV  YN L+  LC   R+EE+  L  EME    +P     + +   LC+
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCK 458

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A  L  +MR++   P       ++  L K+G   EA  +     +   + D+V 
Sbjct: 459 EGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I G + +  +  A++L+  +   G  P VV +N +I+G C+   + EA  +   + 
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            KGL+PSV TY  L+N +C+ GN+ Q M      +E  +  P  +TYT LI GLC   + 
Sbjct: 579 LKGLVPSVVTYTTLMNAYCEVGNM-QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +++ L   M  KG  P+ +T+  +I   CK      AL  + MM      P    +  L
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697

Query: 647 ISA 649
           I+A
Sbjct: 698 INA 700



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 15/354 (4%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+  S + I++   K G +D+A S F  M + G + + F YN L+ GLC +  ++E+ 
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
               +ME+ G +P   T N++ +       + GA  +V+KM +QG  P +   T LI   
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G   EA +   + +  GF  +++ Y+  +  L  + R++ AL LF ++      PD 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA---MLC 556
           + Y+I+I GLCK   V  A  L+ +M  K   P       ++ G  K+GNI +A      
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +RM   E    DV+ Y  +IDG        +A+ L+ +M E+G  P+ +TF  LI G C
Sbjct: 507 WTRMDLME----DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 617 KCDRPRAALVHFRMMKE----KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    R  L+  R M E    KG+ P +  +  L++A+    N    F  L EM
Sbjct: 563 R----RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM 612



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 17/346 (4%)

Query: 328 DIIINTLLKDGKL-------DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           D +I  L+ D  L       DL L  FR     G      +++ L         + ++  
Sbjct: 137 DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNG-----LVWDMLAFAYSRHEMIHDALF 191

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           ++ +M++  F+ +  T NS+   + R  D++   ++  +++V G        ++LI  LC
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM-RHTDIM--WDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +  K  +A  FL D   +   P IV  +  +     +  +D+A   F  +  +G   D  
Sbjct: 249 EQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSF 307

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           +YNI++ GLC A  + EA    ++M   G+ P V TYN L  G+   G +  A   + +M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           L  +  +PD++TYTTLI G C  G  ++A+ L  E   +G   N I +  L++ LCK  R
Sbjct: 368 L-LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR 426

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL  F  M+   ++PD  V+  LI     E     A+++ ++M
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/499 (22%), Positives = 200/499 (40%), Gaps = 87/499 (17%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A GFL+     +GL+  A  +  ++  +GL  P+  +Y  L+   C  C +  +E  LK 
Sbjct: 348 AKGFLL-----LGLMSGARKVVQKMLLQGLN-PDLVTYTTLI---CGHCQMGNIEEALKL 398

Query: 92  MQDY---GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVA 144
            Q+    G+  +      LL   C  G+ ++AL++F+E+    ++  ++   V+SIL+  
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFI---VYSILIHG 455

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEK---TFC--VLIHGFVKKSRVDKALQLFDKMTKS 199
             K G V +A +L E+M     RL  K    F    ++ G  K   + +A   FD  T+ 
Sbjct: 456 LCKEGFVQRAYQLYEQM-----RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
               D  +Y+++I G  +   +  A+QLY +M   GITP     + LI      G+L   
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 260 VK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            K  E+   + +    +   ++M      G++ + ++ L  M +   +    V   ++ K
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM-EANAVVPTHVTYTVLIK 629

Query: 318 GT--------------------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           G                     + P++ +++ II    K  ++  AL L+  M    C  
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
               Y  LI+ LC    L++   ++  +E+        T  ++ +  C +  V  AL   
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYF 749

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEA----------------------------- 448
            +M  +G    ++  + +I  LCK G   EA                             
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQ 809

Query: 449 ------FRFLTDMVQEGFL 461
                 F FL  +V+ GF+
Sbjct: 810 GNNSSVFEFLAMVVKSGFI 828



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 1/143 (0%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P   +Y  L+ ALC    +  V+  +  ++D      K T   +++ +C  GQ  KAL
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKAL 746

Query: 122 SVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
             FN+++  G+V     +S ++    K G + +A      M    +  + +    +++ F
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 181 VKKSRVDKALQLFDKMTKSGFAS 203
            ++       +    + KSGF S
Sbjct: 807 HQQGNNSSVFEFLAMVVKSGFIS 829


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 240/494 (48%), Gaps = 20/494 (4%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M D NI  N  T+  +I   VK+++ +++ ++ ++M  +G   D   ++ ++ G  ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNS 278
           +E A ++Y  M  SG  PD      LI   +  G+L   +K + E   R         +S
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++R L     +D A +L   MI+G    D     LM ++            +I  L + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPD----RLMFYE------------LILGLCQAG 164

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K+  A   F++M + GC  NV +YN L+ GLC+S +LE++  L  EM+     P   T N
Sbjct: 165 KVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYN 224

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   +C+ + V     L   MR  G+ P V   + LI  LC+ G+  +A      M++ 
Sbjct: 225 TLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 284

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+   Y+  I GL   ++V  A ELF  +      PD VAYN +I+G CK   + EA
Sbjct: 285 GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 344

Query: 519 EDLFNEMI-TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           E L+ EM    GL P++ T+N LI+G+CK G + +A   ++ M  K   + D  TY  LI
Sbjct: 345 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA-DSCTYRILI 403

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GL  A + D+A+ ++ +M EK    + ++ ++ + GLCK      A   F   ++ G  
Sbjct: 404 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 463

Query: 638 PDMFVFVALISAFL 651
           P+   F  L  + +
Sbjct: 464 PNPETFRILSESLI 477



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 232/487 (47%), Gaps = 20/487 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S ++ +  K  + +++ +++E M       +   F  ++ GF + + ++KA +++  M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG+  D   Y ++I GL K  +L+ +L++ SEM   G TP  +  S L          
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL---------- 121

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA--YNLLQAMIKGEPIADVGVEMLM 314
              V+ + + R V+  + L + ++R        D+   Y L+  + +   + D       
Sbjct: 122 ---VRALAKARRVDHASSLFDEMIR---GGHHPDRLMFYELILGLCQAGKVKDASERFKQ 175

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K    PN   ++++++ L   G+L+ A +LF EM    C  +V  YN L+D +C + R
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE  +L   M  +G+ P   T +++   LCR  ++  AL +   M   G +P     T 
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-H 493
           LI  LC+  K ++A      M Q    PD V Y++ I G      +D A +L+R++    
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P +V +N +I G CK  ++  A +L  EM TKGL     TY +LI G  ++  +D+A
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +    +M EK+    D ++  + + GLC  G  D A  ++    + G  PN  TF  L  
Sbjct: 416 LEVYKQMREKKF-LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 614 GLCKCDR 620
            L K  R
Sbjct: 475 SLIKLGR 481



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 189/348 (54%), Gaps = 3/348 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++ N  ++  II +L+K+ K + +  +  EM   GC  +VF +N ++ G   SN +E++ 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           E+ + M ESG+KP + + + +   L +   +  +L ++ +M ++G  P ++  + L++ L
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K  +   A     +M++ G  PD + +   I GL    +V  A E F+ +  HGC P+V
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN+++ GLC + ++ +A  LF EM +    P V TYN L++  CK+  +++       
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 560 MLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           M  + +G  P+VIT++TLI GLC  G  + A+ ++  M E GC PN+ T+  LI+GLC+ 
Sbjct: 246 M--RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA 303

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++   A   F  M +  + PD   + +LI+ +    +   A ++ +EM
Sbjct: 304 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 227/495 (45%), Gaps = 24/495 (4%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N ++Y+ ++++L K    +     L+EM   G   D +    ++Q +  S   +KA  V+
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +++ G+  ++V + IL+   +K G++D++ +++  M       + + +  L+    K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD A  LFD+M + G   D  M+  +I GLC+  +++ A + + +M   G  P+  + 
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 244 SKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + L+      G+L    TL  +   +    +   +  N+++  +     +++   L +AM
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAE--MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAM 246

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                             G V PN  +F  +I+ L + G+L+ AL +F  M + GC  N 
Sbjct: 247 RAA---------------GYV-PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 290

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + Y  LI GLC + ++ ++ EL  +M ++   P     NS+    C+R  +  A  L R+
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 350

Query: 420 MRV-QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M    G +P +     LI   CK GK   A   + +M  +G   D   Y   I GL    
Sbjct: 351 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT 410

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           ++D ALE+++ +       D V+    + GLCK   + +A  +F      G +P+  T+ 
Sbjct: 411 KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR 470

Query: 539 LLINGWCKSGNIDQA 553
           +L     K G ++ A
Sbjct: 471 ILSESLIKLGRVEDA 485



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 195/437 (44%), Gaps = 53/437 (12%)

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           D+++       +SI++ LV     +++Y +L+ M+                    +P+  
Sbjct: 3   DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA----------------GCNPDVF 46

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ ++    +   ++ A  +++ M + G   +   Y+ LI GL    +L+ES ++L EM
Sbjct: 47  AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 106

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P+    +S+ R L + + V  A +L  +M   GH P       LI  LC+ GK 
Sbjct: 107 VMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKV 166

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A      M + G  P++  Y+  + GL    +++ A  LF ++ +H C PDVV YN +
Sbjct: 167 KDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTL 226

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           +  +CKA+RV E   LF  M   G +P+V T++ LI+G C++G +++A+     MLE   
Sbjct: 227 LDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA-G 285

Query: 566 GSPDVITYTTLIDGLCIA-----------------------------------GRPDDAI 590
             P+  TYTTLI GLC A                                   G  D+A 
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345

Query: 591 MLWNEMEE-KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            L+ EM    G  P  +TF  LI G CK  +   A      M  KG+  D   +  LI+ 
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405

Query: 650 FLSELNPPLAFEVLKEM 666
                    A EV K+M
Sbjct: 406 LSRATKLDEALEVYKQM 422



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 192/440 (43%), Gaps = 51/440 (11%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           L++L++ V++ +   S  A   L+R L     V+ A+ LFD++ R G   P+   +  L+
Sbjct: 100 LKILSEMVMRGQT-PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH-PDRLMFYELI 157

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
             LC++  V     R K+M  +G   +      LL   C+SGQ ++A ++F E+  H   
Sbjct: 158 LGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCS 217

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            + V ++ LL A  K   V++ C+L E M       N  TF  LIHG  +   ++KAL++
Sbjct: 218 PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F  M ++G   +   Y  +I GLC+ +++  A +L+ +M  + I PD             
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD------------- 324

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                                +  NS++      GS+D+A  L + M  G          
Sbjct: 325 --------------------AVAYNSLIAGYCKRGSMDEAEKLYREMSGG---------- 354

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                  + P   +F+ +I+   K GKL  A  L  EM   G   +   Y  LI GL  +
Sbjct: 355 -----AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRA 409

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            +L+E+ E+ ++M E  F     +  S    LC+  ++  A  +    R  G  P  +  
Sbjct: 410 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 469

Query: 433 TLLIKELCKHGKAMEAFRFL 452
            +L + L K G+  +A + +
Sbjct: 470 RILSESLIKLGRVEDAQKLM 489



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 56/423 (13%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L++ARR+     L  +++  R    P  L F  LI  L   G V++A+  F Q+ + G C
Sbjct: 125 LAKARRVDHASSLFDEMI--RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG-C 181

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN   YN LL  LC S  ++       EM+ +    D  T   LL   C + + ++   
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F  +   G+V   + FS L+    + GE++KA E+   M +   + N+ T+  LI G  
Sbjct: 242 LFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC 301

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDF 240
           +  +V +A +LF+KMT++    DA  Y+ +I G CK   ++ A +LY EM  G+G+ P  
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + LI      G+L                                            
Sbjct: 362 VTFNTLIDGFCKLGKLGR------------------------------------------ 379

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E +A++G + L       + ++ ++ I+I  L +  KLD AL ++++M +   + +  
Sbjct: 380 ANELVAEMGTKGL-------AADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
              + + GLC +  ++++Y +     +SG  P   T   +   L +   V  A  L+   
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 492

Query: 421 RVQ 423
           + +
Sbjct: 493 KAR 495



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 7/196 (3%)

Query: 46  VEEANMLFDQVKREGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK--Y 102
           V +A  LF+++ +   C+P +  +YN L+   CK  S+D  E   +EM   G G      
Sbjct: 306 VIQARELFEKMTQA--CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG-GAGLQPTIV 362

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L+  +C  G+  +A  +  E+   G   D   + IL+   S+  ++D+A E+ ++M
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +    L+  +    + G  K   +D+A  +F+   KSG   +   + ++   L K  ++
Sbjct: 423 REKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRV 482

Query: 222 EMALQLYSEMKGSGIT 237
           E A +L    K   IT
Sbjct: 483 EDAQKLMEPAKARDIT 498


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 173/612 (28%), Positives = 290/612 (47%), Gaps = 44/612 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y YN LL++  +   V+LV    K+M       + YT   L+ + C+SG  + A  +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+++   G   +E  F IL+  + + G   K  EL+ +M    I  N   +  LI  F K
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS---GIT-P 238
           + +   A +L DKM + G       ++  I  LC + ++  A +++ +M+     G+  P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 239 DFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRI-LVSNGSIDQAYN 294
           +      ++     EG   E   LV  +   R+ N + L   +I  + L+ NG + +A+ 
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTM--KRNANFINLESYNIWLLGLIRNGKLLEAWI 347

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L+ M+       +G+E          P+  S++I+++ L K+G L  A  L   M + G
Sbjct: 348 VLKEML------GIGIE----------PDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +   Y+ L+ G C+  ++ E+  LL EM  +   P  +T N +   L +   +  A 
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           NL++KM  +G+        ++I  LC +G+  +A   +  M   G        SAA+G L
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG--------SAALGNL 503

Query: 475 ID--IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            +  I  VD        I    C PD+V Y+ IISGLCKA R+ +A+  F EM++KGL P
Sbjct: 504 GNSFIGLVD------DTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQP 557

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
             A Y+  I+ +C+ G I  A   L  M EK   +  + TY +LI GL    +  +   L
Sbjct: 558 DSAIYDTFIHSFCREGKISSAFQVLKDM-EKRGCNKTLQTYNSLILGLGSKNQIFELYGL 616

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            +EM EKG +P+  T+  ++  LC+  R   A      M +KG+ P++  F  LI AF  
Sbjct: 617 IDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK 676

Query: 653 ELNPPLAFEVLK 664
             +   + EV +
Sbjct: 677 ACDFKASHEVFE 688



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 241/555 (43%), Gaps = 37/555 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G++EEA  L D +KR    + N  SYN  L  L ++  +    + LKEM   G   D Y+
Sbjct: 305 GMLEEAKTLVDTMKRNANFI-NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYS 363

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              ++   C +G    A  +   +I +G + + V +S LL  +   G+V +A  L+  M 
Sbjct: 364 YNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI 423

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             N   N  T  VL+H   K+ R+ +A  L  KM + G+  D    ++II  LC N QL+
Sbjct: 424 SNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLD 483

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A+++ + M   G      + +  I           LV +    +      +  ++I+  
Sbjct: 484 KAIEIVNGMWTHGSAALGNLGNSFIG----------LVDDTISGKKCTPDLVTYSTIISG 533

Query: 283 LVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
           L   G +D A    ++ M KG                 + P+++ +D  I++  ++GK+ 
Sbjct: 534 LCKAGRLDDAKKKFIEMMSKG-----------------LQPDSAIYDTFIHSFCREGKIS 576

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  + ++M + GC + +  YN+LI GL + N++ E Y L+ EM E G  P   T N M 
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTDMVQE 458
            CLC    +  A +++ +M  +G  P +    +LIK  CK      + E F    ++   
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGH 696

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
                   Y+     L+   +V  A ELF              Y  +I  LCK +++  A
Sbjct: 697 ----KEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAA 752

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D+ + +I KG     A++  +I+G+ K GN   A     RM+E  S S         + 
Sbjct: 753 SDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAYPNVK 812

Query: 579 GLCIAGRPDDAIMLW 593
           G  +  +  DA   W
Sbjct: 813 GHILRNKNKDAGNDW 827



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 234/525 (44%), Gaps = 54/525 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAA---MYDVIIGGLCKNKQLEMALQLYSEMK 232
           L+    K    +KA+  F K  +S F        +Y+V++    +  ++E+   LY +M 
Sbjct: 81  LVTVLAKSGFFNKAISHF-KSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            + ++P+    + LI    D G L        ED            +   + + G     
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHL--------ED---------ARELFDKMPARGCEPNE 182

Query: 293 YNLLQAMIKG---EPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +     +++G     +A  G+E+L   +   + PN   ++ +I++  K+GK   A  L  
Sbjct: 183 FTF-GILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVD 241

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM---EESGF-KPTHFTLNSMFRCL 404
           +M + G + +V  +N+ I  LC S ++ E+  + R+M   EE G   P   T   M    
Sbjct: 242 KMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGF 301

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  A  LV  M+   +   ++   + +  L ++GK +EA+  L +M+  G  PDI
Sbjct: 302 CKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDI 361

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  + GL     +  A  L   +  +G  PD V Y+ ++ G C   +V EA +L +E
Sbjct: 362 YSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHE 421

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           MI+    P+  T N+L++   K G I +A   L +M EK  G  D +T   +I+ LC  G
Sbjct: 422 MISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGV-DTVTCNIIINALCNNG 480

Query: 585 RPDDAIMLWNEMEEKG-----------------------CAPNRITFMALITGLCKCDRP 621
           + D AI + N M   G                       C P+ +T+  +I+GLCK  R 
Sbjct: 481 QLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRL 540

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F  M  KG++PD  ++   I +F  E     AF+VLK+M
Sbjct: 541 DDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDM 585


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 246/551 (44%), Gaps = 68/551 (12%)

Query: 120 ALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           A  V+ E+I  G V  +VFS  IL+  F   G ++      E M+      N  T+  +I
Sbjct: 187 AEKVYREMIASG-VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI 245

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             + K  R+D+A +L   M   G   +   Y+++I GLC+  ++E    + +EM   G  
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           PD    + L+      G                                       N  Q
Sbjct: 306 PDGVTYNTLVNGYCKVG---------------------------------------NFHQ 326

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           A++       +  EML   +  + P+  ++  +INT+ K G L+ A+  F +M   G   
Sbjct: 327 ALV-------LHSEML---RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   Y +LI+G      ++E+Y +  EM  SGF PT  T N++    C    +  A+ L+
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           R M  +G  P V   + +I   C++ +   AF+   +MV++G  PD + YS+ I GL + 
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           +R++ A +LF+++      PD   Y  +I+G CK   + EA +L +EMI KG +P   TY
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID---------------GLCI 582
           N+LING  K     +A   L ++   ES  P+ ITY TLI+               G C+
Sbjct: 557 NVLINGLNKQARTREAKRLLLKLFYDES-IPNGITYDTLIESCSDIEFKSVVALIKGFCM 615

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G  ++A  ++  M ++   PN   +  +I G C+      A   ++ M + G  P    
Sbjct: 616 KGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675

Query: 643 FVALISAFLSE 653
            +AL+ A  SE
Sbjct: 676 IIALVKALYSE 686



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 180/346 (52%), Gaps = 2/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   S++ I++++++  K +  A  ++REM   G   NVF YN LI G C +  LE    
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
              EME +   P   T N++    C+ + +  A  L+R M ++G EP +    ++I  LC
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  E    L +M ++GF PD V Y+  + G   +     AL L  ++  +G  PDVV
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I+ +CKA  +  A + F++M  +GL P+  TY  LING+ + G +D+A      M
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + +    P ++TY  L++G C++GR ++AI L   ME KG +P+ +++  +I G C+   
Sbjct: 405 I-RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A      M EKG+ PD   + +LI     +     A ++ +EM
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 243/538 (45%), Gaps = 39/538 (7%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           +++ ++RC  +      +I     +  ++EA  L   +  EGL  PN  +YN ++  LC+
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL-EPNLLTYNMVINGLCR 285

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
              ++     L EM   G+  D  T   L+  YC  G F +AL + +E++ +G   + V 
Sbjct: 286 VGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVT 345

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ L+    K G +++A E  ++M    +R N  T+  LI+GF +K  +D+A +++D+M 
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +SGF      Y+ ++ G C + ++E A+ L   M+G G++PD    S +I       EL 
Sbjct: 406 RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELD 465

Query: 258 LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              +   E  ++ V+   +  +S+++ L     +++A +L Q M+               
Sbjct: 466 RAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML--------------- 510

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
              ++ P+  ++  +IN   K+G L+ AL+L  EM + G + +   YN LI+GL    R 
Sbjct: 511 -NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--------HEP 427
            E+  LL ++      P   T +++    C   +    + L++   ++G         E 
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIES-CSDIEFKSVVALIKGFCMKGLMNEADQVFES 628

Query: 428 WVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            +K N         ++I   C+ G   +A +   +MV  GF+P  V   A +  L   + 
Sbjct: 629 MIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYS-EG 687

Query: 480 VDLALEL-FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +D  L L  RDI       D      ++    K   +    +L  EM   G +PS A 
Sbjct: 688 MDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 169/646 (26%), Positives = 283/646 (43%), Gaps = 88/646 (13%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
            VG V+ A  + +++ +EGL  PN  +YN L+         + VE  L+ M + G   + 
Sbjct: 238 QVGRVDVAMEVLEKMVKEGL-EPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNV 296

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW--VDEHVFSILLVAFSKWGEVDKACELIE 159
            T T L++ YC  G+ D+A  +  E+ +     VDE V+ +L+  + + G ++ A  + +
Sbjct: 297 VTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRD 356

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +++N      LI G+ K  +V +A ++F  M       D   Y+ ++ G C+  
Sbjct: 357 EMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREG 416

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++  A  L  EM G GITP                                   +  N++
Sbjct: 417 KVSKAFMLCEEMLGDGITP---------------------------------TVVTYNTV 443

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++ LV  GS D A +L                 LM+ +G V+PN  S   +++   K G 
Sbjct: 444 IKGLVDVGSYDDALHLWH---------------LMVERG-VTPNEISCCTMLDCFFKMGD 487

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            D A+ L++E+   G  ++   +N +I GLC   +L E+  +   M+E G  P   T  +
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+  +V  A  +   M  Q     ++    LI  L K  K  +    L +M   G
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P++V Y   I G  D +++D A  L+ ++   G  P+VV  + I+S L +  R++EA 
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEAT 667

Query: 520 DLFNEMI-----------TKGLIPSVAT------------------------YNLLINGW 544
            + ++M+           +  L+ +  T                        YN+ I+G 
Sbjct: 668 VILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGL 727

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CKSG +D+A   LS ++ +    PD  TY TLI    ++G  D+A  L +EM EKG  PN
Sbjct: 728 CKSGKLDEARSVLSVLMSR-GFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN 786

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              + ALI GLCK      A   F  + +KG+ P+   +  LI  +
Sbjct: 787 ITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCY 832



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 266/567 (46%), Gaps = 21/567 (3%)

Query: 104 LTPLLQVYCNSGQFDKAL--SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           L  L+ ++C +     A+   VF+   + G+    VF +L+ AF++ G    A  + + M
Sbjct: 124 LRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFC-SGVFDMLMKAFAERGMTKHALYVFDEM 182

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                    ++   L+   V+K     A+ +FD++  +G   D  M  +++   C+  ++
Sbjct: 183 SRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRV 242

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSI 279
           ++A+++  +M   G+ P+    + L+      G+   +  V  +  +R V+   + C  +
Sbjct: 243 DVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTML 302

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           MR     G +D+A  LL+ + + E         L++    V      + ++++   + G+
Sbjct: 303 MRGYCKKGKMDEAEKLLREVEEDE---------LLVVDERV------YGVLVDGYCQMGR 347

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A+ +  EM ++G   N+ + N LI G C   ++ E+  +   M +   KP  ++ N+
Sbjct: 348 MEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNT 407

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    CR   V  A  L  +M   G  P V     +IK L   G   +A      MV+ G
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P+ +     +     +   D A+ L+++I   G     VA+N +ISGLCK  ++ EA 
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAG 527

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F+ M   GL P   TY  L +G+CK+GN+ +A   +  ++E+++ S  +  Y +LIDG
Sbjct: 528 AVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ-IKGVMERQAMSASIEMYNSLIDG 586

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L    + +D   L  EM+ +G +PN +T+  LI+G C   +   A   +  M E+G  P+
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           + V   ++S+   +     A  +L +M
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 149/673 (22%), Positives = 273/673 (40%), Gaps = 88/673 (13%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    L++     G+ + A  +FD++ R G  VP   S + LL  L +     +  M   
Sbjct: 157 GVFDMLMKAFAERGMTKHALYVFDEMSRIGR-VPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           ++   G   D Y  + ++  +C  G+ D A+ V  +++  G     V ++ L+  +   G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF-ASDAAMY 208
           + +    ++  M +  +  N  T  +L+ G+ KK ++D+A +L  ++ +      D  +Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
            V++ G C+  ++E A+++  EM   G+  +                             
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNM---------------------------- 367

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                ++CN++++     G + +A  +   M+                   + P+  S++
Sbjct: 368 -----VICNTLIKGYCKLGQVCEAERVFVGMVDW----------------NLKPDCYSYN 406

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +++   ++GK+  A  L  EM   G    V  YN +I GL +    +++  L   M E 
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   +  +M  C  +  D   A+ L +++  +G          +I  LCK GK MEA
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M + G  PD + Y     G      V  A ++   +        +  YN +I G
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L K +++ +  DL  EM T+GL P+V TY  LI+GWC    +D+A      M+E+   +P
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIER-GFTP 645

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEM-----------------------EEKGCA--- 602
           +V+  + ++  L    R  +A ++ ++M                       E +  A   
Sbjct: 646 NVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSL 705

Query: 603 ---------PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                     N I +   I GLCK  +   A     ++  +G  PD F +  LI A    
Sbjct: 706 DKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVS 765

Query: 654 LNPPLAFEVLKEM 666
            N   AF++  EM
Sbjct: 766 GNVDEAFKLRDEM 778



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 215/490 (43%), Gaps = 55/490 (11%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A ML +++  +G+  P   +YN +++ L    S D        M + G   ++ +
Sbjct: 416 GKVSKAFMLCEEMLGDGI-TPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEIS 474

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              +L  +   G  D+A+ ++ EI+  G+    V F+ ++    K G++ +A  + +RM 
Sbjct: 475 CCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMK 534

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  +E T+  L  G+ K   V +A Q+   M +   ++   MY+ +I GL K ++L 
Sbjct: 535 ELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLN 594

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
               L  EM+  G++P+      LI+   DE +L       +E  +R      ++C+ I+
Sbjct: 595 DVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L  +  I +A  +L  M+  + +A                N  S  ++ N L  + + 
Sbjct: 655 SSLYRDDRISEATVILDKMLDFDILA--------------VHNKCSDKLVKNDLTLEAQ- 699

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
            +A SL +       + N  +YN  IDGLC S +L+E+  +L  +   GF P +FT  + 
Sbjct: 700 KIADSLDKS-DICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCT- 757

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                                             LI      G   EAF+   +M+++G 
Sbjct: 758 ----------------------------------LIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P+I  Y+A I GL  +  +D A  LF  +   G  P+ V YNI+I   C+   + +A  
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 521 LFNEMITKGL 530
           L  +M  +G+
Sbjct: 844 LREKMTEEGI 853



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 15/345 (4%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P++ S+ I+++ L        A ++ R++  + C  N   Y      +CN         +
Sbjct: 99  PHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAY-----AVCN--------HV 145

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
               +E GF    F +  + +    R     AL +  +M   G  P ++  + L+ +L +
Sbjct: 146 FSVYKEFGFCSGVFDM--LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQ 203

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+   A      +V  G +PD+   S  +     + RVD+A+E+   +   G  P+VV 
Sbjct: 204 KGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVT 263

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +++G          E +   M  +G+  +V T  +L+ G+CK G +D+A   L  + 
Sbjct: 264 YNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVE 323

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E E    D   Y  L+DG C  GR +DA+ + +EM   G   N +    LI G CK  + 
Sbjct: 324 EDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQV 383

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F  M +  +KPD + +  L+  +  E     AF + +EM
Sbjct: 384 CEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEM 428


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 239/533 (44%), Gaps = 21/533 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            +S LL+  S+ G      +   RM    ++ N   +  +I+   K   V  A  +  K+
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +S  + D   Y  +I G C+   L+ ALQ++++M   G  P+    S LI    D G +
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 257 TLLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                 I E     +      C   +  L   G  + A+ L   M       + G E   
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM------KNKGCE--- 522

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  ++  +I+ L   G L +A+ LF  M++ G   N   YN LI+ L  + R
Sbjct: 523 -------PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNT 433
           ++ ++ +L  M  +G      T N M +  C   D   A+ ++  M  +GH    V +NT
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           + IK  C  G    A R L  M   G  PD   Y+  I G   I +++ A  LF ++   
Sbjct: 636 I-IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G CP+ V Y  +I G CK +++  A  L   M   G  P+V TYN+LI+G  K  N   A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 M+E E   P+V+TYT +IDGLC  G    A+ ++N+M E+GC PN +T+ +LI 
Sbjct: 755 EELCKVMIE-EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 813

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L +  +   A   F  ++  G+ PD   +V +I A++       AF  L  M
Sbjct: 814 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 248/523 (47%), Gaps = 27/523 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +++ ++ A  K G V  A  +++++ +  +  +  T+  +I G  +K  +D ALQ+F++M
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K G   +   Y  +I GLC + ++  A  L  EM   GI P     +  I +  D G  
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 255 ----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                L + +K    + +V T T L +     L  +G +  A  L   M           
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISG----LCVSGLLKVAIGLFHRM----------- 551

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +  V PNT +++ +IN L+++ ++  A  +   M + G   N+  YN +I G C
Sbjct: 552 -----SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYC 606

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
                +++  ++  M + G      T N++ +  C   +   AL ++  MR  G +P   
Sbjct: 607 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 666

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T LI   CK  K   AF    +MV +G  P+ V Y+A I G    +++D A  L   +
Sbjct: 667 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 726

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+V  YN++I GL K    + AE+L   MI +G+ P+V TY  +I+G CK+G+ 
Sbjct: 727 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 786

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+   ++M+E +   P+++TY++LI  L   G+ ++A  L+ E+E  G  P+ IT++ 
Sbjct: 787 SLALEMFNKMIE-QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I       +   A      M + G +P ++ +  LI    +E
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 182/684 (26%), Positives = 297/684 (43%), Gaps = 45/684 (6%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           AR ++ L +L+Q  ++   F    A   L+  L  +G+       + ++  EG+  PN  
Sbjct: 332 ARTMSFLDMLSQSGLRMGLF----AYSALLIHLSRLGMTAAVMDRYHRMLSEGV-QPNLL 386

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            YN ++ ALCK  +V   E  +K++ +     D +T T ++  +C     D AL VFN++
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G     V +S L+      G V++A +LI  M    I     T    I         
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A +LF  M   G   +   Y  +I GLC +  L++A+ L+  M   G+ P+    + L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I          +LV    E+R +    ++ N + R  +    +     +    I G+P  
Sbjct: 567 I---------NILV----ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK 613

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
            + V   M+ +G  S N  +++ II      G    AL +   M   GC  + + Y  LI
Sbjct: 614 AMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G C  +++E ++ L  EM + G  P   T  ++    C+ + +  A +L+  M+  G  
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V+   +LI  L K      A      M++EG  P++V Y+A I GL       LALE+
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   GC P+++ Y+ +I  L +  +V EAE+LF E+   GLIP   TY  +I  +  
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC---------IAGRPD---------- 587
           SG ++ A   L RM+ K    P + TY  LI GL          +A  PD          
Sbjct: 853 SGKVEHAFNFLGRMI-KAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 911

Query: 588 ----DAIMLWN-EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               DA+ + + ++ E     +     AL++ L    R   A      M  +G+ PD   
Sbjct: 912 TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 971

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + +L+ + L   N  LA  V K M
Sbjct: 972 YNSLLCSLLRVRNVDLAMGVFKHM 995



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 168/668 (25%), Positives = 274/668 (41%), Gaps = 47/668 (7%)

Query: 28   MSPGALGFLIRCLGSVGL--VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            MSP    +    LG      ++ A  +F+Q+ +EG C PN  +Y+ L+  LC S  V+  
Sbjct: 416  MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEA 474

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
               ++EM  +G     +T T  +   C+ G ++ A  +F ++ + G   + + ++ L+  
Sbjct: 475  FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 534

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
                G +  A  L  RM    +  N  T+  LI+  V+  R+  A  + + M ++G  ++
Sbjct: 535  LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTN 594

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKE 262
               Y+ +I G C     + A+ + + M   G + +    + +I    D G  T  L + +
Sbjct: 595  IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 654

Query: 263  IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
            +  D            ++        ++ A+ L   M+      D G+           P
Sbjct: 655  LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV------DDGL----------CP 698

Query: 323  NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
            N  ++  +I+   KD KLD A SL   M + GC  NV  YN LI GL   N    + EL 
Sbjct: 699  NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 758

Query: 383  REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            + M E G  P   T  +M   LC+      AL +  KM  QG  P +   + LI+ L + 
Sbjct: 759  KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 818

Query: 443  GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            GK  EA     ++ + G +PD + Y   I   I   +V+ A      +   GC P +  Y
Sbjct: 819  GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 878

Query: 503  NIIISGLCKA-----QRVAEAEDL-----FNEMITKG------------LIP--SVATYN 538
             ++I GL        QR+A   D+     F    T              L P  SV   N
Sbjct: 879  GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 938

Query: 539  LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
             L++    +G   +A   L  M+  +   PD   Y +L+  L      D A+ ++  M  
Sbjct: 939  ALVSNLSTAGRWFEANELLGSMI-SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997

Query: 599  KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            +GC  +   +  LI  LC+  R + A + F  M  +   PD  V   LI   L +    L
Sbjct: 998  QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 1057

Query: 659  AFEVLKEM 666
              E L  M
Sbjct: 1058 CMEFLHIM 1065



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 253/572 (44%), Gaps = 53/572 (9%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI  L   GL++ A  LF ++ R+G+  PN  +YN L+  L ++  +    + L  M   
Sbjct: 531  LISGLCVSGLLKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   +  T   +++ YC  G   KA+ V N ++  G     V ++ ++  +   G    A
Sbjct: 590  GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              +++ M D   + +E ++  LI GF K S+++ A  LF++M   G   +   Y  +I G
Sbjct: 650  LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED---RD 268
             CK+++L+ A  L   MK SG  P+ +  + LI   + +   +    L K + E+    +
Sbjct: 710  YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 269  VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
            V T T + +     L  NGS   A  +   MI+               +G + PN  ++ 
Sbjct: 770  VVTYTAMIDG----LCKNGSTSLALEMFNKMIE---------------QGCL-PNLLTYS 809

Query: 329  IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
             +I  L ++GK++ A +LF E+ + G + +   Y  +I+    S ++E ++  L  M ++
Sbjct: 810  SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 869

Query: 389  GFKPTHFTLNSMFRCLCRR-----------QDVVGALNL-----------VRKMRVQGHE 426
            G +PT +T   + + L               DVV   +            V   ++   +
Sbjct: 870  GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 929

Query: 427  PW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            P   V+    L+  L   G+  EA   L  M+ +G  PD   Y++ +  L+ ++ VDLA+
Sbjct: 930  PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAM 989

Query: 485  ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
             +F+ +   GC   +  Y  +I  LC+  R  EA   F  M+ +   P      +LI+G 
Sbjct: 990  GVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGL 1049

Query: 545  CKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
             + G  D  M  L  ++E     P    YT L
Sbjct: 1050 LRDGYKDLCMEFL-HIMETRRYMPSFHIYTIL 1080



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 247/597 (41%), Gaps = 49/597 (8%)

Query: 37   IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
            I  L  +G  E+A  LF  +K +G C PN Y+Y  L+  LC S  + +       M   G
Sbjct: 497  IIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 97   WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
               +  T   L+ +   + +   A  V N +  +G     V ++ ++  +   G+  KA 
Sbjct: 556  VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 156  ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
             ++  M       N  T+  +I G+        AL++ D M   G   D   Y  +I G 
Sbjct: 616  LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675

Query: 216  CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
            CK  ++E A  L++EM   G+             C +E   T L+    +D  ++T T L
Sbjct: 676  CKISKMESAFGLFNEMVDDGL-------------CPNEVTYTALIDGYCKDEKLDTATSL 722

Query: 276  CNSIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEML---MIFKGTVSPNTSSFDIII 331
               + R         Q YN L+  + K    +  G E L   MI +G + PN  ++  +I
Sbjct: 723  LEHMKRSGCRPNV--QTYNVLIHGLTKQNNFS--GAEELCKVMIEEG-IFPNVVTYTAMI 777

Query: 332  NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            + L K+G   LAL +F +M + GC+ N+  Y++LI  L    ++EE+  L  E+E  G  
Sbjct: 778  DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 837

Query: 392  PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL-CKHGKAMEAFR 450
            P   T   M         V  A N + +M   G +P +    +LIK L  ++  A +   
Sbjct: 838  PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 897

Query: 451  FLTDMVQE---GFLP--------------------DIVCYSAAIGGLIDIKRVDLALELF 487
             L D+V     G+                       +   +A +  L    R   A EL 
Sbjct: 898  ALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELL 957

Query: 488  RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
              + + G CPD  AYN ++  L + + V  A  +F  M T+G    +  Y  LI   C+ 
Sbjct: 958  GSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQL 1017

Query: 548  GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                +A +    ML + + +PD +    LIDGL   G  D  +   + ME +   P+
Sbjct: 1018 HRRKEARITFENMLMR-TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 1073



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 227/528 (42%), Gaps = 40/528 (7%)

Query: 3    SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
            +IL   RRI    V+   + ++  F +      +I+    +G  ++A ++ + + + G  
Sbjct: 568  NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627

Query: 63   VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
              N  +YN +++  C S +       L  M+D G   D+++ T L+  +C   + + A  
Sbjct: 628  A-NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 123  VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +FNE++D G   +E  ++ L+  + K  ++D A  L+E M     R N +T+ VLIHG  
Sbjct: 687  LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 182  KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            K++    A +L   M + G   +   Y  +I GLCKN    +AL+++++M   G  P+  
Sbjct: 747  KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 242  ILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
              S LI +   EG   E   L  E+ E   +    +    ++   + +G ++ A+N L  
Sbjct: 807  TYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865

Query: 299  MIK----------GEPIADVGVEMLMIFK-----GTVSPN------TSSFDIIINTLLKD 337
            MIK          G  I  +  E L+  +       V PN      T+  D +     K 
Sbjct: 866  MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 925

Query: 338  GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +LD  LS             V + N L+  L  + R  E+ ELL  M   G  P     
Sbjct: 926  AELDPGLS-------------VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 972

Query: 398  NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            NS+   L R ++V  A+ + + M  QG E  +     LI  LC+  +  EA     +M+ 
Sbjct: 973  NSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 1032

Query: 458  EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
              + PD V  +  I GL+     DL +E    +      P    Y I+
Sbjct: 1033 RTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 1/303 (0%)

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI    +   +  +   L  + +SG +   F  +++   L R       ++   +M  +
Sbjct: 320 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 379

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P +     +I  LCK G   +A   +  + +    PD   Y++ I G      +D A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++F  +   GC P+ V Y+ +I+GLC + RV EA DL  EMI  G++P+  T    I  
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C  G  + A      M  K    P+V TYT LI GLC++G    AI L++ M   G  P
Sbjct: 500 LCDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+ ALI  L +  R + A V   +M   G+  ++  +  +I  +    +P  A  V+
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618

Query: 664 KEM 666
             M
Sbjct: 619 NNM 621


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 234/504 (46%), Gaps = 63/504 (12%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +  +L++A+ +  +     E  +R  D   +L+  +   L+   VK++       ++ +M
Sbjct: 162 IADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEM 221

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +   + +   ++ +I GLCK  +L  A  +  +MK  G  P+    + LI      G +
Sbjct: 222 IRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRV 281

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                                         G + +A  +L+ M++ +             
Sbjct: 282 ------------------------------GKMYKADAILKEMVENK------------- 298

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              VSPN+ +F+++I+   KD  L  AL +F EM   G    V  YN+L++GLCN  +L 
Sbjct: 299 ---VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+  LL EM  S  KP   T N++    C+++ +  A  L   +  QG  P V     L+
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK GK  EAF     M+++GFLP+   Y+  I G     +++    L  ++   G  
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D V YNI+IS  C+ +   +A  L +EM+ KGL PS  TYN+L+NG+C  GN+ +A L 
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL-RAALN 534

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L + +EKE    +V+TY  LI G C  G+ +DA  L NEM EKG  PNR T+        
Sbjct: 535 LRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY-------- 586

Query: 617 KCDRPRAALVHFRMMKEKGMKPDM 640
                   ++   MM EKG  PD+
Sbjct: 587 -------EIIKEEMM-EKGFLPDI 602



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 184/359 (51%), Gaps = 4/359 (1%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL A++K      V      + +  +SPN  +F+ +IN L K GKL+ A  +  +M   G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYE---LLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
              NV  YN LIDG C   R+ + Y+   +L+EM E+   P   T N +    C+ +++ 
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            AL +  +M+ QG +P V     L+  LC  GK  EA   L +M+     P+++ Y+A I
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    K ++ A ELF +I   G  P+V+ +N ++ G CK  ++ EA  L   M+ KG +
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P+ +TYN LI G+C+ G +++    L+ M +      D +TY  LI   C    P  A  
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAAR 499

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           L +EM +KG  P+ +T+  L+ G C     RAAL   + M+++G   ++  +  LI  +
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY 558



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 45/398 (11%)

Query: 264 WEDRDVN---TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV--EMLMIFKG 318
           W  R++N   ++ L+C  ++ +L +     +  ++L + +KGE    + +    L +  G
Sbjct: 96  WSRRELNVNYSIELIC-RLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSG 154

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
               N+   D+++   +++ K  L L  F+         +V   N L+  L   N     
Sbjct: 155 QFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGV 214

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             + +EM      P   T N+                                   +I  
Sbjct: 215 EFVYKEMIRRKISPNLITFNT-----------------------------------VING 239

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL---ALELFRDICAHGC 495
           LCK GK  +A   + DM   GF P++V Y+  I G   + RV     A  + +++  +  
Sbjct: 240 LCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV 299

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V +N++I G CK + ++ A  +F EM ++GL P+V TYN L+NG C  G +++A +
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  ML   +  P+VITY  LI+G C     ++A  L++ + ++G  PN ITF  L+ G 
Sbjct: 360 LLDEMLS-SNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           CK  +   A +  ++M EKG  P+   +  LI  F  E
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 186/408 (45%), Gaps = 53/408 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK---A 120
           PN  ++N ++  LCK   ++     + +M+ +G+  +  T   L+  YC  G+  K   A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            ++  E++++      V F++L+  F K   +  A ++ E M    ++    T+  L++G
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              + ++++A  L D+M  S    +   Y+ +I G CK K LE A +L+  +   G+TP 
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTP- 406

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                         N +T   N+++      G +++A+ LLQ  
Sbjct: 407 ------------------------------NVITF--NTLLHGYCKFGKMEEAF-LLQK- 432

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        +M+ KG + PN S+++ +I    ++GK++   +L  EM   G   + 
Sbjct: 433 -------------VMLEKGFL-PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI   C     +++  L+ EM + G KP+H T N +    C   ++  ALNL ++
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           M  +G    V    +LI+  C+ GK  +A   L +M+++G +P+   Y
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 9/242 (3%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           ++   +VL  +++ S   + P  + +  LI       L+EEA  LFD + ++GL  PN  
Sbjct: 353 KLNEAKVLLDEMLSSN--LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL-TPNVI 409

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N LL   CK   ++   +  K M + G+  +  T   L+  +C  G+ ++  ++ NE+
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G   D   ++IL+ A+ +  E  KA  LI+ M D  ++ +  T+ +L++G+  +  +
Sbjct: 470 QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEIL 243
             AL L  +M K G  ++   Y+V+I G C+  +LE A  L +EM   G+ P+   +EI+
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589

Query: 244 SK 245
            +
Sbjct: 590 KE 591


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 258/587 (43%), Gaps = 89/587 (15%)

Query: 116 QFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D+A   FN +ID+G   D   F+ L+  F K G+     +L+ +      R +   + 
Sbjct: 22  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK-RFRPDVFLYT 80

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +IHG+ K   +D     F  +T    + D   Y  +I GL  +K+++ A +L+ E+K +
Sbjct: 81  SVIHGYCKAGDLDTGY--FRAVTPKA-SLDVISYTTVIKGLADSKRIDEACELFEELKTA 137

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G +P+    + +I                                   L+  G I+    
Sbjct: 138 GCSPNVVAYTAVIDG---------------------------------LLKAGRIEDGLK 164

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
             + M     +                P  +++ ++I+ L K   L  A  +F +M Q G
Sbjct: 165 NFEEMSGSSCV----------------PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C+ +   Y  LIDG   +++++E+ +LL  M   G +PT  T  S+    C+   +  A 
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 268

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            ++ +MR +G EP +   T L+      G+A EA++ LT+M   G  PD++ Y++ I  L
Sbjct: 269 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 328

Query: 475 IDIKRVDLALELFRDICAHGCCPDVV---------------------------------- 500
               RV  A  +F  +   GC PD +                                  
Sbjct: 329 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388

Query: 501 -AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            AYN ++ G  K +RV +A  +++ M+  G+ P+  T+N+L++G  K G  D+A      
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           MLEKE   P +++YT LIDGL  AGR  +A + + EM ++G  P   T+ +LI  L K  
Sbjct: 449 MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAG 508

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A      M + G+ PD+  + ALI+  +       A++V +EM
Sbjct: 509 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 264/590 (44%), Gaps = 28/590 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD----LVEMRLKE 91
           +I  L S+  ++EA   F+ +   G C P+  ++  L+   CK+        L+   LK 
Sbjct: 13  VISGLASIDKMDEAYKFFNSMIDNG-CEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR 71

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
            +      D +  T ++  YC +G  D     F  +     +D   ++ ++   +    +
Sbjct: 72  FRP-----DVFLYTSVIHGYCKAGDLDTGY--FRAVTPKASLDVISYTTVIKGLADSKRI 124

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+ACEL E +       N   +  +I G +K  R++  L+ F++M+ S        Y V+
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVV 184

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I GLCK + L  A +++ +M   G  PD    + LI   S   ++     E  +  DV  
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM----DEARKLLDV-- 238

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +L        V+ GSI   +  L  + + + +      +  + +    P    F  ++
Sbjct: 239 --MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV------IAQMRERGCEPGLFIFTSLL 290

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +  L  G+ + A  +  EMT  GC  +V LY +LID L ++ R+ E+  +   M E G  
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T  ++ +   +  +V  A  ++  M   G  P       L+    K  +  +AF  
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC-AHGCCPDVVAYNIIISGLC 510
              MV  G  P+ V ++  + GL    + D A  LF+++       P +V+Y I+I GL 
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           KA RV+EA   F EMI +G+IP   TY  LI    K+G I +A   +  M+ K   +PDV
Sbjct: 471 KAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV-KLGVNPDV 529

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             Y+ LI GL  +   D A  ++ EM ++GCAPN +T+  L  G     R
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 166/316 (52%), Gaps = 9/316 (2%)

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR-QDVV 411
           +GC   +  YN +I GL + ++++E+Y+    M ++G +P      ++    C+  Q  V
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA-FRFLTDMVQEGFLPDIVCYSAA 470
           G   L + ++     P V   T +I   CK G      FR +T         D++ Y+  
Sbjct: 61  GHKLLNQALKR--FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL----DVISYTTV 114

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL D KR+D A ELF ++   GC P+VVAY  +I GL KA R+ +    F EM     
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           +P+  TY ++I+G CK+  +  A     +M++K    PD ITYTTLIDG   A + D+A 
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC-VPDTITYTTLIDGFSKASKMDEAR 233

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L + M  KG  P  +T+ +++ G CK D    A      M+E+G +P +F+F +L+S +
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 651 LSELNPPLAFEVLKEM 666
           LS+     A++VL EM
Sbjct: 294 LSKGRAEEAYQVLTEM 309


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 258/591 (43%), Gaps = 51/591 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    YN +L +L K   +D ++    E+ +     + YT   ++  YC  G   +A   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++I+  G   D   ++ L++   +   VD A E+   M     + NE ++  LIHG  +
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+++AL+LF  MT+         Y V+I  L  + +   AL L++EMK  G  P+   
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN--- 333

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                     V+T T+L +     L     +D+A  +L  M + 
Sbjct: 334 --------------------------VHTYTVLIDG----LCKENKMDEARKMLSEMSE- 362

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG + P+  +++ +I+   K+G +D A  +   M    C  N   Y
Sbjct: 363 --------------KGLI-PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI GLC   ++ ++  LL +M E    P+  T NS+    C+  D+  A  L+  M  
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     ++ I  LCK G+  EA      +  +G   + V Y+A I G   + ++D+
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L   +    C P+   YN++I GLCK +++ EA  L  +M+T G+ P+V TY +LI 
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              K G  D A+   + M+      PDV TYT  +      G  ++   +  +M E+G  
Sbjct: 588 EMLKDGAFDHALKVFNHMVSL-GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P+ +T+  LI G  +      A    + M + G KP +++   LI     E
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 179/691 (25%), Positives = 288/691 (41%), Gaps = 91/691 (13%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFM--------------SPGALGF--LIRCLGSVG 44
           M +IL RAR +     +   ++KS C +              + G   F   +RC  ++ 
Sbjct: 107 MLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTIL 166

Query: 45  LVEEANMLFDQVKREGL------CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           +     +L D++K   L        PN Y++N ++   CK  +V   E+   ++   G  
Sbjct: 167 MSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLH 226

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACEL 157
            D +T T L+  +C +   D A  VF  +   G   +E  ++ L+    + G +++A +L
Sbjct: 227 PDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              M + N     +T+ VLI+      R  +AL LF++M + G   +   Y V+I GLCK
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             +++ A ++ SEM   G+ P     + LI     E                        
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE------------------------ 382

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
                    G ID A+ +L  M                   +  PNT +++ +I  L K 
Sbjct: 383 ---------GMIDDAFEILDLM----------------ESNSCGPNTRTYNELICGLCKK 417

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K+  A++L  +M +     ++  YN+LI G C  N LE +Y LL  M E+G  P  +T 
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +     LC+   V  A  L   ++ +G +      T LI   CK GK   A+  L  M+ 
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +  LP+   Y+  I GL   K++  A  L   +   G  P VV Y I+I  + K      
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  +FN M++ G  P V TY   ++ +   G +++    +++M E E   PD++TYT LI
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE-EGILPDLVTYTVLI 656

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA-------------- 623
           DG    G    A      M + GC P+      LI  L   +R +               
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTL 716

Query: 624 ----ALVHFRMMKEKGMKPDMFVFVALISAF 650
               AL  F  M E G   D+ ++ ALI+ F
Sbjct: 717 EYEIALKLFEKMVEHGCTIDVSIYGALIAGF 747



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 167/637 (26%), Positives = 283/637 (44%), Gaps = 41/637 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G + EA  LF  +  +  C P   +Y  L+ AL  S           EM++ 
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDN-CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK 328

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + +T T L+   C   + D+A  + +E+ + G +   V ++ L+  + K G +D A
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+++ M+  +   N +T+  LI G  KK +V KA+ L +KM +   +     Y+ +I G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNT 271
            CK   LE A +L S M  +G+ PD    S  I +   EG   E   L   + + + V  
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV-KAKGVKA 507

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++  +++      G ID AY+LL+ M+    +                PN+ +++++I
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL----------------PNSYTYNVLI 551

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L K+ K+  A SL  +M  +G    V  Y  LI  +      + + ++   M   G++
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T  +       +  +    +++ KM  +G  P +   T+LI    + G    AF F
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRV------------------DLALELFRDICAH 493
           L  MV  G  P +   S  I  L    R+                  ++AL+LF  +  H
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC  DV  Y  +I+G C+ +R+ EA+ L + M  +G+ PS   YN L++  CK G   +A
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  +  M+E     P + +Y  L+ GL I G  + A  +++ +   G   + + +  LI 
Sbjct: 792 VRLVDAMVEN-GLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLID 850

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GL K D          +M+EKG +P+   +  LI   
Sbjct: 851 GLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 245/535 (45%), Gaps = 27/535 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ +L++ SK+  +D+   +   + +  I  N  TF  +++G+ K   V +A     K+ 
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           ++G   D   Y  +I G C+NK ++ A +++  M   G   +    + LI    + G + 
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 258 LLVK---EIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
             +K   ++ ED     V T T+L    +  L  +G   +A NL   M       + G E
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVL----IYALSGSGRKVEALNLFNEM------KEKGCE 331

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                     PN  ++ ++I+ L K+ K+D A  +  EM++ G + +V  YN LIDG C 
Sbjct: 332 ----------PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +++++E+L  ME +   P   T N +   LC+++ V  A+ L+ KM  +   P +  
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI   CK      A+R L+ M + G +PD   YS  I  L    RV+ A  LF  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A G   + V Y  +I G CK  ++  A  L   M+    +P+  TYN+LI G CK   + 
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   +++ML      P V+TYT LI  +   G  D A+ ++N M   G  P+  T+ A 
Sbjct: 562 EASSLVAKMLTM-GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +                  M E+G+ PD+  +  LI  +        AF+ LK M
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 169/419 (40%), Gaps = 73/419 (17%)

Query: 44  GLVEEANMLFDQVKREGL----------------------------------CVPNNYSY 69
           G VEEA  LFD VK +G+                                  C+PN+Y+Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+E LCK   +      + +M   G      T T L+      G FD AL VFN ++ 
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G+  D   ++  L A+   G +++  ++I +M++  I  +  T+ VLI G+ +     +
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL------------------EMALQLYSE 230
           A      M  +G      +  ++I  L    ++                  E+AL+L+ +
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 231 MKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M   G T D  I   LI   C  E   E   LV  + E R ++    + NS++      G
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE-RGMSPSEDIYNSLLDCCCKLG 786

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +A  L+ AM++                  + P   S+ +++  L  +G  + A ++F
Sbjct: 787 VYAEAVRLVDAMVEN----------------GLLPLLESYKLLVCGLYIEGSNEKAKAVF 830

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +   G   +   +  LIDGL   + ++E  EL+  MEE G +P   T + +   L R
Sbjct: 831 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 269/604 (44%), Gaps = 57/604 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S N ++   CK   +D+       M   G  +D ++   LL   C +G  D+AL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +++  HG   + V ++ L   F   G +  A +++++M    +  +  T+  LI G  +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              +++AL+L  +    GF  +   Y++++  LCK  ++E AL L+ EM+   + PDF +
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI     EG                                  + +AY L + M   
Sbjct: 449 YSILIHGLCKEG---------------------------------FVQRAYQLYEQMRLK 475

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                              P+  +   ++  L K+G +  A + F   T++  M++V LY
Sbjct: 476 RKF----------------PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLY 519

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +IDG    + + E+ +L  +M E G  P+  T N++    CRR D++ A  ++  +R+
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P V   T L+   C+ G   E F FL +M     +P  V Y+  I GL    ++  
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +L+L   + A G  PD V YN II   CK + + +A  L+N M+     P+  TY +LIN
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLIN 699

Query: 543 GWCKSGNIDQAMLCLSRM---LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
             C  G++      + RM   +E  + +    TY T+I   C  G+   A+  +N+M  K
Sbjct: 700 ALCIFGDLKD----VDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAK 755

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G   +   + A+I  LCK      A   F MM  +G+ PD  +   +++AF  + N    
Sbjct: 756 GFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSV 815

Query: 660 FEVL 663
           FE L
Sbjct: 816 FEFL 819



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 151/606 (24%), Positives = 258/606 (42%), Gaps = 61/606 (10%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHG-----------------W- 132
           + +YG+ +  ++   +  +    G+F +  SV  N I+D G                 W 
Sbjct: 108 INEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWD 167

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            +  V+ +L  A+S+   +  A  +I +M D N + +  T+  L+H        D    +
Sbjct: 168 SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDV 224

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY---SEMKGSGITPDFEILSKLITS 249
           ++++  SG         ++I GLC+  +LE A+      +++ G  I     I+SK    
Sbjct: 225 YNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKF--- 281

Query: 250 CS------DEGELTLLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           C             L+VK  +  D      +   N ++  L   GS+D+A      M K 
Sbjct: 282 CKVGLIDVARSXFCLMVKNGLLHD------SFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 303 EPIADV--------GVEMLMIFKGT-----------VSPNTSSFDIIINTLLKDGKLDLA 343
               DV        G  +L +  G            ++P+  ++  +I    + G ++ A
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L L +E    G   NV  YN L+  LC   R+EE+  L  EME    +P     + +   
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+   V  A  L  +MR++   P       ++  L K+G   EA  +     +   + D
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y+  I G + +  +  A++L+  +   G  P VV +N +I+G C+   + EA  +  
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE 575

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  KGL+PSV TY  L+N +C+ GN+ Q M      +E  +  P  +TYT LI GLC  
Sbjct: 576 VIRLKGLVPSVVTYTTLMNAYCEVGNM-QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            +  +++ L   M  KG  P+ +T+  +I   CK      AL  + MM      P    +
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 644 VALISA 649
             LI+A
Sbjct: 695 KVLINA 700



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 15/354 (4%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+  S + I++   K G +D+A S F  M + G + + F YN L+ GLC +  ++E+ 
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
               +ME+ G +P   T N++ +       + GA  +V+KM +QG  P +   T LI   
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G   EA +   + +  GF  +++ Y+  +  L  + R++ AL LF ++      PD 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA---MLC 556
           + Y+I+I GLCK   V  A  L+ +M  K   P       ++ G  K+GNI +A      
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDT 506

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +RM   E    DV+ Y  +IDG        +A+ L+ +M E+G  P+ +TF  LI G C
Sbjct: 507 WTRMDLME----DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 617 KCDRPRAALVHFRMMKE----KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    R  L+  R M E    KG+ P +  +  L++A+    N    F  L EM
Sbjct: 563 R----RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM 612



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 17/346 (4%)

Query: 328 DIIINTLLKDGKL-------DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           D +I  L+ D  L       DL L  FR     G      +++ L         + ++  
Sbjct: 137 DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNG-----LVWDMLAFAYSRHEMIHDALF 191

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           ++ +M++  F+ +  T NS+   + R  D++   ++  +++V G        ++LI  LC
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNM-RHTDIM--WDVYNEIKVSGAPQSECTTSILIHGLC 248

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +  K  +A  FL D   +   P IV  +  +     +  +D+A   F  +  +G   D  
Sbjct: 249 EQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSF 307

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           +YNI++ GLC A  + EA    ++M   G+ P V TYN L  G+   G +  A   + +M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           L  +  +PD++TYTTLI G C  G  ++A+ L  E   +G   N I +  L++ LCK  R
Sbjct: 368 L-LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR 426

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL  F  M+   ++PD  V+  LI     E     A+++ ++M
Sbjct: 427 IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/499 (22%), Positives = 200/499 (40%), Gaps = 87/499 (17%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A GFL+     +GL+  A  +  ++  +GL  P+  +Y  L+   C  C +  +E  LK 
Sbjct: 348 AKGFLL-----LGLMSGARKVVQKMLLQGLN-PDLVTYTTLI---CGHCQMGNIEEALKL 398

Query: 92  MQDY---GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSILLVA 144
            Q+    G+  +      LL   C  G+ ++AL++F+E+    ++  ++   V+SIL+  
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFI---VYSILIHG 455

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEK---TFC--VLIHGFVKKSRVDKALQLFDKMTKS 199
             K G V +A +L E+M     RL  K    F    ++ G  K   + +A   FD  T+ 
Sbjct: 456 LCKEGFVQRAYQLYEQM-----RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
               D  +Y+++I G  +   +  A+QLY +M   GITP     + LI      G+L   
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 260 VK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            K  E+   + +    +   ++M      G++ + ++ L  M +   +    V   ++ K
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM-EANAVVPTHVTYTVLIK 629

Query: 318 GT--------------------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           G                     + P++ +++ II    K  ++  AL L+  M    C  
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
               Y  LI+ LC    L++   ++  +E+        T  ++ +  C +  V  AL   
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYF 749

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEA----------------------------- 448
            +M  +G    ++  + +I  LCK G   EA                             
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQ 809

Query: 449 ------FRFLTDMVQEGFL 461
                 F FL  +V+ GF+
Sbjct: 810 GNNSSVFEFLAMVVKSGFI 828



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 1/143 (0%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P   +Y  L+ ALC    +  V+  +  ++D      K T   +++ +C  GQ  KAL
Sbjct: 687 CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKAL 746

Query: 122 SVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
             FN+++  G+V     +S ++    K G + +A      M    +  + +    +++ F
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 181 VKKSRVDKALQLFDKMTKSGFAS 203
            ++       +    + KSGF S
Sbjct: 807 HQQGNNSSVFEFLAMVVKSGFIS 829


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 294/623 (47%), Gaps = 36/623 (5%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           +  + + GL V + ++   +++ +CK    +L+   L E++  G G  + T T  +Q + 
Sbjct: 6   YKHLLKAGLPV-DAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFG 64

Query: 113 NSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERM-DDCNIRLN 169
            +G  D A+ + +++    +   D   F+  +    +   V++A  L + M + C+   +
Sbjct: 65  RAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS-DAAMYDVIIGGLCKNKQLEMALQLY 228
              +  LI G+ K    D+AL +F ++ + G    +A  +D ++  LCK  +   AL ++
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCN----- 277
            EM G+G+  D  + + LI      G L    + +         RD  T  +L N     
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRA 244

Query: 278 -------SIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVS----PN 323
                  S M +   +G    A N   ++Q  I+   +A    E   +F+ T++    P+
Sbjct: 245 GQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLA----EATQLFESTMTKESVPD 300

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++++I  L K  +L+ AL+LF+E  Q G + +VF Y+ L+D    + R  ++ E+  
Sbjct: 301 VFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M+++G  P     N +  CL ++  V  AL L+  M  +G  P  +   ++I  L   G
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCG 419

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A+ F   M +    PD+V Y+  + GL  ++R D A +LF ++ A+ C PD+  + 
Sbjct: 420 RYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFG 479

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I  L KA R+ +A +    ++  G  P+   YN LI+G+C+SG +D+       M+E 
Sbjct: 480 TLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIEC 539

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            S  PD ITYT L+ G    G    A+ L  EM  +G  P   T+  LI  L    +   
Sbjct: 540 -SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVED 598

Query: 624 ALVHFRMMKEKGMKPDMFVFVAL 646
           A   F+ M  KG  PDM  + AL
Sbjct: 599 AYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 243/545 (44%), Gaps = 27/545 (4%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L   RR+     L  D+ +  C  +P  + +  LI      G  + A  +F ++K+EG C
Sbjct: 99  LCEVRRVEQAMTLFDDM-RETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSC 157

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN  S++ L+  LCK           +EM   G   D      L+   C  G   +A  
Sbjct: 158 KPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARR 217

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIE--RMDDCNIRLNEKTFCVLIHG 179
           + + +  H    D   + IL+ A  + G++ +    +E  R D C +      F  +I G
Sbjct: 218 LLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNF--IIQG 275

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F++  R+ +A QLF+         D   Y+++I  LCK+KQLE AL L+ E +  G+  D
Sbjct: 276 FIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLD 334

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQ 297
               S L+ +    G     ++  +  +    M  T++ N ++  L   G +D+A  LL+
Sbjct: 335 VFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE 394

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M +               KG + P+  +++I+I+ L   G+ + A S F  M +     
Sbjct: 395 DMNR---------------KG-IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 438

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  YN L++GL    R +E+ +L  EM+ +   P   T  ++   L +   +  AL   
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQS 498

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            ++   GH P       LI   C+ G+  + +    DM++    PD + Y+  + G    
Sbjct: 499 ARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRR 558

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
               +A+EL +++   G  P +  YN++I  L  A +V +A  LF EMI KG  P + TY
Sbjct: 559 GHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 618

Query: 538 NLLIN 542
           + L N
Sbjct: 619 SALPN 623



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 248/587 (42%), Gaps = 67/587 (11%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKW 148
           K +   G   D +T T +++  C  G+ +    +  E+   G  + E   +  + AF + 
Sbjct: 7   KHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRA 66

Query: 149 GEVDKACELIERMDDCNI-RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAA 206
           G++D A  +++ M   N  + +   F   +H   +  RV++A+ LFD M ++   A D  
Sbjct: 67  GDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVV 126

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSG-ITPD---FEILSKLITSCSDEGELTLLVKE 262
            Y+ +I G CK    + AL ++  +K  G   P+   F+ L   +   S   +   + +E
Sbjct: 127 AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQE 186

Query: 263 IWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           +       DVN    +CN+++      G + QA  LL  M       D            
Sbjct: 187 MLGAGLKADVN----VCNTLIHCTCRLGMLRQARRLLHHMTAHACARDA----------- 231

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
                 ++ I++N   + G++    S        GC  +   YN +I G     RL E+ 
Sbjct: 232 -----FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L          P  FT N                                    L+  L
Sbjct: 287 QLFESTMTKESVPDVFTYN------------------------------------LLIAL 310

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  EA     +  Q G + D+  YS  +       R   ALE+F ++   GC PD 
Sbjct: 311 CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDT 370

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN++IS L K  +V EA +L  +M  KG++P   TYN++I+     G  ++A      
Sbjct: 371 VVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG- 429

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+++   SPDV+TY TL++GL    R D+A  L++EM+   C P+  TF  LI  L K  
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 489

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   AL     + + G  P+ +++ ALIS F         +E+ ++M
Sbjct: 490 RMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDM 536



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 4/188 (2%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +AL  ++ +   G   D      ++  +CK  R     +L  E+  KG+  S  T    I
Sbjct: 1   MALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECI 60

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK-G 600
             + ++G++D AM  L  M       PD + +T  +  LC   R + A+ L+++M E   
Sbjct: 61  QAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD 120

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM-KPDMFVFVALISAFLSELNPPL- 658
           CAP+ + +  LI G CK      AL  FR +K++G  KP+   F  L+  FL +++    
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLV-IFLCKMSRATD 179

Query: 659 AFEVLKEM 666
           A  V +EM
Sbjct: 180 ALAVFQEM 187



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 4/196 (2%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP  + +  L+  L  +   +EA  LFD+++    C+P+  ++  L++ L K+  ++   
Sbjct: 437 SPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK-CMPDLTTFGTLIDTLAKAGRMEDAL 495

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAF 145
            +   +   G   + Y    L+  +C SGQ DK   +F ++I+   + D   ++IL++ F
Sbjct: 496 EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGF 555

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           S+ G    A EL++ M          T+ VLI       +V+ A  LF +M   GF  D 
Sbjct: 556 SRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDM 615

Query: 206 AMYDVIIGGLCKNKQL 221
             Y  +      NK +
Sbjct: 616 QTYSALPNLSTPNKSV 631


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 164/663 (24%), Positives = 298/663 (44%), Gaps = 90/663 (13%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-DYGWGYD 100
           S+G +E A  +   +  +G+ + N  +   L++  CK C V+  E  L+EM+ + G   D
Sbjct: 113 SLGDIEGAKGVLKFMSEKGV-MRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVD 171

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
           +Y    L+  YC  G+   A+ V +E++  G  ++  V + L+  + K G+V +   L+ 
Sbjct: 172 EYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLM 231

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M   +++ +  ++C L+ G+ +     KA  + D+M + G       Y+ ++ GLC+  
Sbjct: 232 CMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFG 291

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             + AL+L+  M   G+TP+      L+      G+ +  +  +W+D             
Sbjct: 292 DYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRAL-TLWDD------------- 337

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                                              I    ++ +  +F+ +IN L K G+
Sbjct: 338 -----------------------------------ILARGINKSIYAFNTMINGLCKMGE 362

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A   F+ M ++GC  +   Y  L DG C    +EE++++  +ME+    P+    NS
Sbjct: 363 MDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNS 422

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L   + +   ++L+ +M  +G  P V     LI   C  G+  +AF    +M+ +G
Sbjct: 423 LIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG 482

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRD------ICAHGCC----------------- 496
           F P+++  S  +  L  + R+D A  L +       +  H C                  
Sbjct: 483 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIA 542

Query: 497 ------------PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
                       P+ V YNI ++GLCK+ +V +A   F  +      P   TY  LI+G+
Sbjct: 543 DTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGF 602

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
             +G +++A      M+ K    P++ TY  L++GLC +G  D A  L++++  KG  PN
Sbjct: 603 SAAGYVNEAFNLRDEMVNK-GLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPN 661

Query: 605 RITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
            +T+  LI G CK   PR AL +  +M+KE G+ P +  + +LI+ F  + +   A ++L
Sbjct: 662 VVTYNILIDGYCKSGSPREALDLRGKMLKE-GISPSIITYSSLINGFCKQSDVEEAMKLL 720

Query: 664 KEM 666
            EM
Sbjct: 721 NEM 723



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 160/657 (24%), Positives = 294/657 (44%), Gaps = 57/657 (8%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A +++DQ++R  + VP+ ++   ++ A CK+  V+     ++EM+  G+  +  +   L+
Sbjct: 50  AVLVYDQMRRLDI-VPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLV 108

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD-DCNI 166
             Y + G  + A  V   + + G +   V  ++L+  + K  +V++A +++  M+ +  +
Sbjct: 109 DGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGV 168

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            ++E  +  LI G+ K  ++  A+++ D+M K G   +  + + +I G CKN Q+    +
Sbjct: 169 VVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGER 228

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L   M+   + PD      L+     +G       V +    + +    +  N++++ L 
Sbjct: 229 LLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLC 288

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G    A  L                 LM+ +G V+PN   +  +++ L K G    AL
Sbjct: 289 RFGDYKDALRLWH---------------LMLQRG-VTPNEVGYCTLLDGLFKMGDFSRAL 332

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           +L+ ++   G  ++++ +N +I+GLC    ++ + E  + MEE G KP   T  ++    
Sbjct: 333 TLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGY 392

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+  +V  A  +  KM  +   P ++    LI  L    K  +    L +M   G  P++
Sbjct: 393 CKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNV 452

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y A I G  D  R+D A   + ++   G  P+V+  + I+S L +  R+ EA  L  +
Sbjct: 453 VTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 512

Query: 525 MITKGLI-----------------------------------PSVATYNLLINGWCKSGN 549
           M+   L+                                   P+   YN+ + G CKSG 
Sbjct: 513 MVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGK 572

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           ++ A       L   S +PD  TY TLI G   AG  ++A  L +EM  KG  PN  T+ 
Sbjct: 573 VNDARRFFLG-LSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYN 631

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           AL+ GLCK      A   F  +  KG+ P++  +  LI  +    +P  A ++  +M
Sbjct: 632 ALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM 688



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 246/545 (45%), Gaps = 50/545 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+VY   G    AL VF+ +  +G        + LL    K GE   A  + ++M   +
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +  T  ++++ + K  +V++A++   +M K GF  +A  Y+ ++ G      +E A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +   M   G+                              R+  T+TLL    ++    
Sbjct: 122 GVLKFMSEKGVM-----------------------------RNKVTLTLL----IKGYCK 148

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +++A  +L+ M K + +                 +  ++  +I+   K GK+  A+ 
Sbjct: 149 QCKVEEAEKVLREMEKEDGVV---------------VDEYAYGALIDGYCKVGKMGDAIR 193

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  EM ++G   N+F+ N+LI+G C + ++ E   LL  M +   KP  ++  ++    C
Sbjct: 194 VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R      A N+  +M  +G EP V     L+K LC+ G   +A R    M+Q G  P+ V
Sbjct: 254 RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEV 313

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y   + GL  +     AL L+ DI A G    + A+N +I+GLCK   +  A++ F  M
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P   TY  L +G+CK GN+++A     +M ++E   P +  Y +LI GL  + +
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI-FPSIEMYNSLIVGLFTSKK 432

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
               I L  EM+ +G +PN +T+ ALI G C   R   A   +  M  KG  P++ +   
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSK 492

Query: 646 LISAF 650
           ++S+ 
Sbjct: 493 IVSSL 497



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 264/616 (42%), Gaps = 61/616 (9%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A G LI     VG + +A  + D++ + GL + N +  N L+   CK+  V   E  L  
Sbjct: 174 AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKM-NLFVCNSLINGYCKNGQVHEGERLLMC 232

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M+      D Y+   L+  YC  G   KA +V ++++  G     V ++ LL    ++G+
Sbjct: 233 MRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A  L   M    +  NE  +C L+ G  K     +AL L+D +   G       ++ 
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNT 352

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR 267
           +I GLCK  +++ A + +  M+  G  PD   +  LS       +  E   + +++ ++ 
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEE 412

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSS 326
              ++ +  NS++  L ++  I +  +LL  M  +G                 +SPN  +
Sbjct: 413 IFPSIEMY-NSLIVGLFTSKKISKLIDLLAEMDTRG-----------------LSPNVVT 454

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM- 385
           +  +I      G+LD A S + EM   G   NV + + ++  L    R++E+  LL++M 
Sbjct: 455 YGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 514

Query: 386 -------------------------------EESGFK---PTHFTLNSMFRCLCRRQDVV 411
                                          +ES  K   P +   N     LC+   V 
Sbjct: 515 DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A      +      P       LI      G   EAF    +MV +G +P+I  Y+A +
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL     +D A  LF  +   G  P+VV YNI+I G CK+    EA DL  +M+ +G+ 
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS 694

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PS+ TY+ LING+CK  ++++AM  L+ M +  +    + T++ L++G CI       + 
Sbjct: 695 PSIITYSSLINGFCKQSDVEEAMKLLNEM-KASNVDQTIATFSKLVEG-CIQHGDVKKMS 752

Query: 592 LWNEMEEKGCAPNRIT 607
             + M    C    IT
Sbjct: 753 KLHNMMHMACPSAGIT 768



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 1/152 (0%)

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V  A  +F+ M   G  PS+ + N L++   K G    A+L   +M  +    PDV T  
Sbjct: 12  VKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQM-RRLDIVPDVFTCA 70

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +++  C AG+ + A+    EME+ G   N +++ +L+ G         A    + M EK
Sbjct: 71  IMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEK 130

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+  +      LI  +  +     A +VL+EM
Sbjct: 131 GVMRNKVTLTLLIKGYCKQCKVEEAEKVLREM 162


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 257/548 (46%), Gaps = 56/548 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++  + + G+++ A  L   +    +  N  T+  ++     + R+  AL + D+M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G A    MY VI+   C+      A+++  ++   G   D                  
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGN--------------- 194

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG 302
                             CN ++  +   GS+D+A +LL+               A++KG
Sbjct: 195 ------------------CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 303 EPIADVG--VEMLM--IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
             +A     V+ LM  + +    PN  +F+ +I+ L ++G  +    +  +M + GC  +
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           + +Y  +IDG+C    LE ++E+L  M   G KP     N++ + LC  +       L+ 
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  +          +L+   C++G        L  M++ G +PD++ Y+  I G     
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D A+ L + + A GC P+ ++Y I++ GLC A+R  +AEDL ++MI +G   +  T+N
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LIN  CK G ++QA+  L +ML     SPD+I+Y+T+IDGL  AG+ D+A+ L N M  
Sbjct: 477 TLINFLCKKGLVEQAIELLKQML-VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +PN I + ++ + L +  R    +  F  +++  ++ D  ++ A+IS+         
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595

Query: 659 AFEVLKEM 666
           A E L  M
Sbjct: 596 AIEFLAYM 603



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 264/572 (46%), Gaps = 35/572 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           M +   RA ++   R LA  V      + P A  +  ++R L + G + +A  + D++ R
Sbjct: 96  MVAGYCRAGQLESARRLAAAVP-----VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G C P    Y+ +LEA C+          L+++   G   D      +L   C+ G  D
Sbjct: 151 RG-CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +AL +  ++   G   + V ++ +L       +WG V    EL+E M       N  TF 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ---ELMEEMVRMACPPNIVTFN 266

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI    +    ++  ++  +M + G   D  MY  II G+CK   LE+A ++ + M   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 235 GITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G+ P+    + L+   CS E   E   L+ E++ D+D     +  N ++     NG +D+
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
              LL+ M++               +G + P+  ++  +IN   K+G +D A+ L + MT
Sbjct: 386 VIELLEQMLE---------------RGCM-PDVITYTTVINGFCKEGLIDEAVMLLKSMT 429

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  N   Y  ++ GLC++ R  ++ +L+ +M + G      T N++   LC++  V 
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+ L+++M V G  P +   + +I  L K GK  EA   L  MV +G  P+ + YS+  
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L    R++  +++F +I       D V YN +IS LCK      A +    M++ G +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           P+ +TY +LI G    G + +A   L+ +  K
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 226/552 (40%), Gaps = 86/552 (15%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELI 158
           + YT  P+++  C  G+   AL+V +E+   G      ++ ++L A  + G    A  ++
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E +      L+     ++++    +  VD+AL L   +   G   D   Y+ ++ GLC  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
           K+     +L  EM      P                               N +T   N+
Sbjct: 241 KRWGCVQELMEEMVRMACPP-------------------------------NIVTF--NT 267

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L  NG  ++ + +L  M++                   +P+   +  II+ + K+G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEH----------------GCTPDIRMYATIIDGICKEG 311

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L++A  +   M   G   NV  YN L+ GLC++ R EE+ ELL EM +        T N
Sbjct: 312 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C+   V   + L+ +M  +G  P V   T +I   CK G   EA   L  M   
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 459 GFLPDIVCYSAAIGGLIDIKR-----------------------------------VDLA 483
           G  P+ + Y+  + GL   +R                                   V+ A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + + 
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             + G I++ +     + +    S D + Y  +I  LC  G  + AI     M   GC P
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRS-DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 604 NRITFMALITGL 615
           N  T+  LI GL
Sbjct: 611 NESTYTILIRGL 622



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E A+ + +++   GL  PN   YN LL+ LC +   +  E  L EM D     D  T
Sbjct: 311 GHLEVAHEILNRMPSYGL-KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  ++++ G + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A  L  +M + G   +   ++ +I  LCK   +E
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G+    L +  +  ++ ++  T++ +SI 
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G I++   +                   I   T+  +   ++ +I++L K G+ 
Sbjct: 550 SALSREGRINKVIQMFDN----------------IQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + A+     M   GC+ N   Y  LI GL +   ++E+ E+L E+   G    H 
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R      L   +++  C ++P     LI  L   GLVE+A  L  Q+   G C P
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSP 505

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SY+ +++ L K+   D     L  M + G   +    + +       G+ +K + +F
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + I D     + V ++ ++ +  K GE ++A E +  M       NE T+ +LI G   +
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625

Query: 184 SRVDKALQLFDKMTKSG 200
             V +A ++  ++   G
Sbjct: 626 GFVKEAQEMLTELCSKG 642


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 186/353 (52%), Gaps = 2/353 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ KG   P+  ++ +++N L K G  DLA +L  +M Q      V +YN +IDGLC   
Sbjct: 7   MVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++++  L +EME  G +P   T +S+  CLC       A  L+  M  +   P V   +
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 125

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI    K GK +EA +   +MV+    P IV YS+ I G     R+D A ++F  + + 
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C PDVV YN +I G CK +RV E  ++F EM  +GL+ +  TYN+LI G  ++G+ D A
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 M+  +   P+++TY TL+DGLC  G+ + A++++  ++     P   T+  +I 
Sbjct: 246 QEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+CK  +       F  +  KG+KPD+  +  +IS F  + +   A  + KEM
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 202/441 (45%), Gaps = 28/441 (6%)

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           LI+RM     + +  T+ V+++G  K+   D A  L +KM +        +Y+ II GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMT 273
           K K ++ AL L+ EM+  GI P+    S LI+   + G   + + L+ ++ E R +N   
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPDV 121

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              ++++   V  G + +A  L   M+K                 ++ P+  ++  +IN 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKR----------------SIDPSIVTYSSLING 165

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
                +LD A  +F  M    C  +V  YN LI G C   R+EE  E+ REM + G    
Sbjct: 166 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 225

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK---AMEAFR 450
             T N + + L +  D   A  + ++M   G  P +     L+  LCK+GK   AM  F 
Sbjct: 226 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           +L     E   P I  Y+  I G+    +V+   +LF ++   G  PDVVAYN +ISG C
Sbjct: 286 YLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +     EA+ LF EM   G +P+   YN LI    + G+ + +   +  M  +  G    
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM--RSCGFAGD 400

Query: 571 ITYTTLIDGLCIAGRPDDAIM 591
            +   L+  +   GR D + +
Sbjct: 401 ASTIGLVTNMLHDGRLDKSFL 421



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 160/306 (52%), Gaps = 1/306 (0%)

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           ++L   M   GC  ++  Y  +++GLC     + ++ LL +ME+   +P     N++   
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+ + +  ALNL ++M  +G  P V   + LI  LC +G+  +A R L+DM++    PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  +SA I   +   ++  A +L+ ++      P +V Y+ +I+G C   R+ EA+ +F 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M++K   P V TYN LI G+CK   +++ M    R + +     + +TY  LI GL  A
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF-REMSQRGLVGNTVTYNILIQGLFQA 239

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D A  ++ EM   G  PN +T+  L+ GLCK  +   A+V F  ++   M+P ++ +
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 644 VALISA 649
             +I  
Sbjct: 300 NIMIEG 305



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 176/395 (44%), Gaps = 23/395 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            + +++    K G+ D A  L+ +M+   +      +  +I G  K   +D AL LF +M
Sbjct: 18  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 77

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   +   Y  +I  LC   +   A +L S+M    I PD    S LI +   EG+L
Sbjct: 78  ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 137

Query: 257 TLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV------ 308
               K   E   R ++   +  +S++     +  +D+A  + + M+      DV      
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 309 ------------GVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
                       G+E+   M  +G V  NT +++I+I  L + G  D+A  +F+EM   G
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N+  YN L+DGLC + +LE++  +   ++ S  +PT +T N M   +C+   V    
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 316

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           +L   + ++G +P V     +I   C+ G   EA     +M ++G LP+  CY+  I   
Sbjct: 317 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 376

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           +     + + EL +++ + G   D     ++ + L
Sbjct: 377 LRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 23/371 (6%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   P    YN +++ LCK   +D      KEM+  G   +  T + L+   CN G++ 
Sbjct: 44  QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 103

Query: 119 KALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A  + +++I+     D   FS L+ AF K G++ +A +L + M   +I  +  T+  LI
Sbjct: 104 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 163

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +GF    R+D+A Q+F+ M       D   Y+ +I G CK K++E  ++++ EM   G+ 
Sbjct: 164 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 223

Query: 238 PDFEILSKLITSCSDEGELTL---LVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAY 293
            +    + LI      G+  +   + KE+  D    N MT   N+++  L  NG +++A 
Sbjct: 224 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY--NTLLDGLCKNGKLEKAM 281

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            + + + + +                + P   +++I+I  + K GK++    LF  ++  
Sbjct: 282 VVFEYLQRSK----------------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V  YN +I G C     EE+  L +EM+E G  P     N++ R   R  D   +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385

Query: 414 LNLVRKMRVQG 424
             L+++MR  G
Sbjct: 386 AELIKEMRSCG 396



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 176/415 (42%), Gaps = 20/415 (4%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L D++  +G C P+  +Y  ++  LCK    DL    L +M+             ++   
Sbjct: 3   LIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C     D AL++F E+   G     V +S L+     +G    A  L+  M +  I  + 
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            TF  LI  FVK+ ++ +A +L+D+M K         Y  +I G C + +L+ A Q++  
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 231 MKGSGITPDFEILSKLITS-CS-DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           M      PD    + LI   C     E  + V      R +   T+  N +++ L   G 
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            D A  + + M+                   V PN  +++ +++ L K+GKL+ A+ +F 
Sbjct: 242 CDMAQEIFKEMV----------------SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            + +      ++ YN +I+G+C + ++E+ ++L   +   G KP     N+M    CR+ 
Sbjct: 286 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 345

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
               A  L ++M+  G  P       LI+   + G    +   + +M   GF  D
Sbjct: 346 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R+   + + + +V   CF        LI+       VEE   +F ++ + GL V N  +Y
Sbjct: 171 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL-VGNTVTY 229

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L++ L ++   D+ +   KEM   G   +  T   LL   C +G+ +KA+ VF E + 
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 288

Query: 130 HGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
              ++   + ++I++    K G+V+   +L   +    ++ +   +  +I GF +K   +
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A  LF +M + G   ++  Y+ +I    ++   E + +L  EM+  G   D   +  L+
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LV 407

Query: 248 TSCSDEGEL 256
           T+   +G L
Sbjct: 408 TNMLHDGRL 416


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 167/661 (25%), Positives = 292/661 (44%), Gaps = 52/661 (7%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           + +RI     L + +V+S        L  L+  L   G   EA  LF ++ + G+  PN+
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVA-PNH 329

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y   +++L K   V+     L EM   G   D    T ++      G+ ++A  V   
Sbjct: 330 VTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRH 389

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
            +        V +++L+ A  + G +D A +++ +M++ ++  N  TF  +++G VK+  
Sbjct: 390 ALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGC 449

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           + KA     KM  SG A +   Y  +I G  K +  E AL +Y +M   G+  +      
Sbjct: 450 IAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEAN------ 503

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                                        + +S++  L  NG+I++A  L +        
Sbjct: 504 ---------------------------NFIVDSLVNGLRKNGNIEEAEALFK-------- 528

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            D+G   L++       +  ++  +++ L K G +  AL + +E+ +     +  +YN  
Sbjct: 529 -DMGERGLLL-------DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I+ LC   +  E+   L+EM  +G +P   T N+M    CR  +   AL L+ +M+    
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +P +   T L+  L + G   +A   L +M   GF P  + Y   +      +   + LE
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +   +   G   D+  YN ++  LC      +A  + +EM+ +G+ P   T+N LI G C
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           KS ++D A    ++ML  +  SP++ T+ TL+ GL  AGR  +A  +  EM++ G  PN 
Sbjct: 761 KSSHLDNAFATYAQMLH-QGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNN 819

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +T+  L+TG  K      AL  +  M  KG  P    + +LIS F        A E+  E
Sbjct: 820 LTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSE 879

Query: 666 M 666
           M
Sbjct: 880 M 880



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 261/569 (45%), Gaps = 31/569 (5%)

Query: 89  LKEMQDYGWGYDKYTL---TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
           L EM   G G D   +     L+  YC       AL+V   +   G  +D   ++ L+  
Sbjct: 174 LAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAG 233

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F   G+ D A E+ ERM    +  +  T   LI  + K  R+++A  L++ M +SG   D
Sbjct: 234 FFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPD 293

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
                 ++ GLC++ +   A  L+ EM   G+ P+       I S +    +   +  + 
Sbjct: 294 VVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLG 353

Query: 265 E--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           E   R V    ++  ++M  L   G I++A ++L+       ++D            ++P
Sbjct: 354 EMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLR-----HALSD-----------NITP 397

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++ ++++   + G +D A  +  +M +     NV  ++++++GL     + ++   +
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYM 457

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC-- 440
           R+M++SG  P   T  ++     + Q    AL++ R M  +G    V+ N  ++  L   
Sbjct: 458 RKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG----VEANNFIVDSLVNG 513

Query: 441 --KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
             K+G   EA     DM + G L D V Y+  + GL     +  AL++ +++      PD
Sbjct: 514 LRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPD 573

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            V YN+ I+ LC+  + +EA+    EM   GL P  ATYN +I+  C+ GN  +A+  L+
Sbjct: 574 AVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLN 633

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M +  S  P++ITYTTL+ GL  AG  + A  L NEM   G  P  +T+  ++      
Sbjct: 634 EM-KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGS 692

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             P   L    +M   G+  D+ V+  L+
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLV 721



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 48/465 (10%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
           A+D   Y++ + GL +     +A  + SEM   G+  D   +S  +   S          
Sbjct: 114 AADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLS---------- 163

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                                    G + +A  L + +++G  I  +GV           
Sbjct: 164 -----------------------RTGLVGEAAALAEMLVRGRGIDGLGV----------- 189

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
                ++ +I+   K   +  AL++   MT  G   +V  YN L+ G   S   + ++E+
Sbjct: 190 ---VGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEV 246

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              M+  G +P+  T  ++    C+ + +  A  L   M   G  P V   + L+  LC+
Sbjct: 247 AERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCR 306

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  EA+    +M + G  P+ V Y   I  L  ++RV+ +L L  ++ + G   D+V 
Sbjct: 307 DGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVM 366

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  ++  L K  ++ EA+D+    ++  + P+  TY +L++  C++GNID A   L +M 
Sbjct: 367 YTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQME 426

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           EK S SP+V+T++++++GL   G    A     +M++ G APN +T+  LI G  KC   
Sbjct: 427 EK-SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            AAL  +R M  +G++ + F+  +L++      N   A  + K+M
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM 530



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 230/525 (43%), Gaps = 24/525 (4%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G ++ A  +  Q++ + +  PN  +++ +L  L K   +      +++M+D G   +  
Sbjct: 412 AGNIDGAEQMLLQMEEKSVS-PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV 470

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L+  +      + AL V+ +++  G   +  +   L+    K G +++A  L + M
Sbjct: 471 TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM 530

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +  + L+   +  L+ G  K   +  AL++  ++ +   + DA +Y+V I  LC+  + 
Sbjct: 531 GERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKF 590

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCN 277
             A     EM+ +G+ PD    + +I++   EG     L LL +  W     N +T    
Sbjct: 591 SEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITY--T 648

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++  L+  G +++A  LL  M      A  G           +P   ++  ++      
Sbjct: 649 TLVVGLLEAGVVEKAKYLLNEM------ASAGF----------TPTPLTYRRVLQACSGS 692

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
               + L +   M   G   ++ +YN L+  LC      ++  +L EM   G  P   T 
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++    C+   +  A     +M  QG  P +     L+  L   G+  EA   + +M +
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P+ + Y   + G         AL L+ ++ + G  P    YN +IS   KA  + +
Sbjct: 813 MGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           A++LF+EM  +G++ + +TY++L+NGW K  N  +  + L  M E
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 286/602 (47%), Gaps = 43/602 (7%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-I 128
           N LL +LC +      E  L++M+      +  T   +L  Y   G+F  AL V  ++  
Sbjct: 227 NILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKKGRFKAALCVLEDMER 285

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           D    D + ++I++    +     +A  L++RM   ++  +E T+  LI+GF  + +++ 
Sbjct: 286 DSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINH 345

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  +F+ M +  F    A Y  +I G C+N++++ AL + SEM+ +G+ P          
Sbjct: 346 AHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMP---------- 395

Query: 249 SCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
             S+  +   ++K + E   D D+ T + L N         G I +A +  Q M + +  
Sbjct: 396 --SEISKAKQILKSMLEDGIDPDIVTYSALIN--------EGMITEAEHFRQYMSRMK-- 443

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         +S ++ SF+ II++    G +  A +++  M + G   NV  Y NL
Sbjct: 444 --------------ISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNL 489

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           + GLC    L ++ + +  + +        T N++   +C+   +  AL+L  KM     
Sbjct: 490 LRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNC 549

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +   T+L+   C+ GK + A   L  M+ +G +PD V Y+  + GLI+  +V  A  
Sbjct: 550 LPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASY 609

Query: 486 LFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +F++ IC  G   D +AYN +++G  K   +   + + ++M    + P+ A+YN+L++G+
Sbjct: 610 VFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGY 669

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
            K G   ++ L L + + ++   PD +TY  LI GL   G  D A+    +M  +G  P+
Sbjct: 670 VKGGQFSKS-LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 728

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           R+ F  LIT   +  +   AL  F  MK   M P    + A+I+  + +     + EVL+
Sbjct: 729 RLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLR 788

Query: 665 EM 666
           EM
Sbjct: 789 EM 790



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 246/522 (47%), Gaps = 21/522 (4%)

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACE 156
            +D  +   ++  YC+ G   +A +V++ ++ +G       +  LL    + G + +A +
Sbjct: 445 SFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQ 504

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            +  + D    ++EKTF  L+ G  K   +D+AL L +KM K+    D   Y +++ G C
Sbjct: 505 FMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFC 564

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMT 273
           +  ++  AL +   M   G+ PD    + L+    +EG++   + + +EI     +    
Sbjct: 565 RKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADC 624

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  NS+M   +  G+I+    ++  M + E                V PN++S++I+++ 
Sbjct: 625 IAYNSLMNGYLKGGNINTIKRMMSDMYQSE----------------VYPNSASYNILMHG 668

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            +K G+   +L L++ M + G   +   Y  LI GL     ++ + + L +M   G  P 
Sbjct: 669 YVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 728

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               + +      +  +  AL L   M+     P  K  + +I  L +     ++   L 
Sbjct: 729 RLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLR 788

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+Q G  P+   Y A +     + ++D A  L  ++ A G  P  VA + II GLCK  
Sbjct: 789 EMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCG 848

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ EA  +F+ M+  G++P+VAT+  L++  CK   I  A L L R++E      DV++Y
Sbjct: 849 KLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADA-LHLKRLMESCRLKVDVVSY 907

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             LI GLC   R  DA+ L+ EM+ KG  PN  T++ L   +
Sbjct: 908 NVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAM 949



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 248/530 (46%), Gaps = 28/530 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G++ EA      + R  +   ++ S+NC++++ C   ++         M  YG   +  T
Sbjct: 427 GMITEAEHFRQYMSRMKISF-DSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCT 485

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              LL+  C  G   +A      ++D    +DE  F+ LL+   K+G +D+A +L E+M 
Sbjct: 486 YQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMV 545

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             N   +  T+ +L+ GF +K ++  AL +   M   G   D   Y  ++ GL    Q++
Sbjct: 546 KNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVK 605

Query: 223 MALQLYSEMK-GSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNS 278
            A  ++ E+    G+  D    + L+      G +   +K +  D    +V   +   N 
Sbjct: 606 AASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINT-IKRMMSDMYQSEVYPNSASYNI 664

Query: 279 IMRILVSNGSIDQAYNLLQAMIKG--EP----------------IADVGVEML--MIFKG 318
           +M   V  G   ++  L + M++    P                + D+ V+ L  M+ +G
Sbjct: 665 LMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG 724

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P+   FDI+I    +  K+  AL LF  M  +    +   Y+ +I+GL   N L++S
Sbjct: 725 -IFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQS 783

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           +E+LREM + G +P H    ++    CR   +  A  L  +M+  G  P     + +I+ 
Sbjct: 784 HEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRG 843

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK GK  EA    + M++ G +P +  ++  +  L    ++  AL L R + +     D
Sbjct: 844 LCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVD 903

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           VV+YN++I+GLCK +R+++A DL+ EM +KGL P+V TY  L      +G
Sbjct: 904 VVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTG 953



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 218/491 (44%), Gaps = 52/491 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++EA  L +++ +   C+P+ ++Y  LL   C+   +    + L+ M D G   D   
Sbjct: 532 GTLDEALDLCEKMVKNN-CLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVA 590

Query: 104 LTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
            T LL    N GQ   A  VF EII  +  + D   ++ L+  + K G ++    ++  M
Sbjct: 591 YTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDM 650

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  N  ++ +L+HG+VK  +  K+L L+  M + G   D   Y ++I GL +   +
Sbjct: 651 YQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 710

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           ++A++   +M   GI PD  +   LIT+ S++ ++                    N++  
Sbjct: 711 DIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMH-------------------NAL-- 749

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                    Q +N ++ +                    +SP++ ++  +IN L++   LD
Sbjct: 750 ---------QLFNCMKWL-------------------RMSPSSKTYSAMINGLIRKNYLD 781

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            +  + REM Q+G   N   Y  L++  C   +++ ++ L  EM+  G  P     +S+ 
Sbjct: 782 QSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSII 841

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           R LC+   +  A+ +   M   G  P V   T L+  LCK  K  +A      M      
Sbjct: 842 RGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLK 901

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            D+V Y+  I GL   KR+  AL+L+ ++ + G  P+V  Y  +   +     +   E+L
Sbjct: 902 VDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEEL 961

Query: 522 FNEMITKGLIP 532
             ++  +GLIP
Sbjct: 962 LEDIEERGLIP 972



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/568 (21%), Positives = 236/568 (41%), Gaps = 78/568 (13%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+ A+ K  +V  A   +  MDDC  + +      ++   V++           + 
Sbjct: 155 VFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRES 214

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE---ILSKLITSCSDE 253
               F  D    ++++  LC N +   A  +  +MK   ++       IL   +     +
Sbjct: 215 LAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFK 274

Query: 254 GELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             L +L +++  D    D+ T  ++ + + RI  S     +A+ LL+ M K + I     
Sbjct: 275 AALCVL-EDMERDSIPADIYTYNIMIDKLCRIKRSA----RAFLLLKRMRKDDLI----- 324

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  +++ +IN    +GK++ A  +F  M +   + +V  Y  +IDG C
Sbjct: 325 -----------PDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYC 373

Query: 371 NSNRLEESYELLREMEESGFKPTHFT-----LNSM------------------------- 400
            + R++++  +L EM+ +G  P+  +     L SM                         
Sbjct: 374 RNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAE 433

Query: 401 -----------------FRCL----CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
                            F C+    C R ++V A  +   M   GH P V     L++ L
Sbjct: 434 HFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGL 493

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G  ++A +F+  ++      D   ++A + G+     +D AL+L   +  + C PD+
Sbjct: 494 CQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDI 553

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             Y I++SG C+  ++  A  +   M+ KG++P    Y  L+NG    G +  A      
Sbjct: 554 HTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE 613

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ++ KE    D I Y +L++G    G  +    + ++M +    PN  ++  L+ G  K  
Sbjct: 614 IICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGG 673

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +   +L  ++ M  KG++PD   +  LI
Sbjct: 674 QFSKSLYLYKYMVRKGIRPDNVTYRLLI 701



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 148/641 (23%), Positives = 251/641 (39%), Gaps = 129/641 (20%)

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +A+SV   +   G+    +F+ LL              +I R D  N       F +L+ 
Sbjct: 119 QAMSVLRRLAVMGFSCTAIFTSLL-------------RIISRFDSTN----HVVFELLVK 161

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            +VK+ +V  A      M   GF +     + I+  L +  + +       E        
Sbjct: 162 AYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPL 221

Query: 239 DFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D    + L+ S    GE      +++++   R  N++T   N+I+   V  G    A  +
Sbjct: 222 DVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTY--NTILHWYVKKGRFKAALCV 279

Query: 296 LQAMIKGEPIADVGVEMLMI-------------------FKGTVSPNTSSFDIIINTLLK 336
           L+ M +    AD+    +MI                    K  + P+  +++ +IN    
Sbjct: 280 LEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFG 339

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +GK++ A  +F  M +   + +V  Y  +IDG C + R++++  +L EM+ +G  P+  +
Sbjct: 340 EGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS 399

Query: 397 -----LNSM------------------------------------------FRCL----C 405
                L SM                                          F C+    C
Sbjct: 400 KAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYC 459

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL------------- 452
            R ++V A  +   M   GH P V     L++ LC+ G  ++A +F+             
Sbjct: 460 HRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEK 519

Query: 453 ----------------------TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                                   MV+   LPDI  Y+  + G     ++  AL + + +
Sbjct: 520 TFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMM 579

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGN 549
              G  PD VAY  +++GL    +V  A  +F E+I K GL      YN L+NG+ K GN
Sbjct: 580 LDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGN 639

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           I+     +S M + E   P+  +Y  L+ G    G+   ++ L+  M  KG  P+ +T+ 
Sbjct: 640 INTIKRMMSDMYQSEV-YPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYR 698

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            LI GL +C     A+     M  +G+ PD  VF  LI+AF
Sbjct: 699 LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAF 739



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 200/438 (45%), Gaps = 27/438 (6%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVK-REGLCVPN 65
           R  +I P  ++ Q ++         A   L+  L + G V+ A+ +F ++  +EGL   +
Sbjct: 565 RKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL-YAD 623

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
             +YN L+    K  +++ ++  + +M       +  +   L+  Y   GQF K+L ++ 
Sbjct: 624 CIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYK 683

Query: 126 EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
            ++  G   ++V + +L++  S+ G +D A + +E+M    I  +   F +LI  F +KS
Sbjct: 684 YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS 743

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           ++  ALQLF+ M     +  +  Y  +I GL +   L+ + ++  EM   G+ P+     
Sbjct: 744 KMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYI 803

Query: 245 KLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY--------- 293
            L+ +    G++     +KE  +   +    +  +SI+R L   G +++A          
Sbjct: 804 ALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRS 863

Query: 294 ----------NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                      L+  + K   IAD      ++    +  +  S++++I  L KD ++  A
Sbjct: 864 GMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDA 923

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L L+ EM   G   NV  Y  L   + ++  ++   ELL ++EE G  P +  L ++ R 
Sbjct: 924 LDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYVQLENLER- 982

Query: 404 LCRRQDVVGALNLVRKMR 421
             + +D +  LN++R  R
Sbjct: 983 --QMEDAIRRLNMIRNCR 998



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 55/418 (13%)

Query: 253 EGELTL-LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGV 310
           +G+L L ++  I E   ++ +T +    + IL+      QA ++L+ + + G     +  
Sbjct: 80  DGKLALKILSSIVERSGLDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVMGFSCTAIFT 139

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
            +L I     S N   F++++   +K+ K LD A+++   M   G   +    N ++  L
Sbjct: 140 SLLRIISRFDSTNHVVFELLVKAYVKERKVLDAAVAVLF-MDDCGFKASPIACNTILRAL 198

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
                 +  +  LRE     F     T N +   LC   +   A ++++KM+       V
Sbjct: 199 VEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSV 258

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +NT+L     K G+   A   L DM ++    DI  Y+  I  L  IKR   A  L + 
Sbjct: 259 TYNTIL-HWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKR 317

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +      PD   YN +I+G     ++  A  +FN M+ +  +PSVATY  +I+G+C++  
Sbjct: 318 MRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRR 377

Query: 550 IDQAMLCLSRM-------------------LEKESGSPDVITYTTL-------------- 576
           ID+A+  LS M                   + ++   PD++TY+ L              
Sbjct: 378 IDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQ 437

Query: 577 -----------------IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
                            ID  C  G   +A  +++ M   G +PN  T+  L+ GLC+
Sbjct: 438 YMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQ 495


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 258/548 (47%), Gaps = 56/548 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++  + + G+++ A  L   +    +  N  T+  ++     + R+  AL + D+M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G A    MY VI+   C+      A+++  ++   G                      
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA-------------------- 226

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG 302
                     DV      CN ++  +   GS+D+A +LL+               A++KG
Sbjct: 227 ---------LDVGN----CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKG 273

Query: 303 EPIADVG--VEMLM--IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
             +A     V+ LM  + +    PN  +F+ +I+ L ++G  +    +  +M + GC  +
Sbjct: 274 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           + +Y  +IDG+C    LE ++E+L  M   G KP     N++ + LC  +       L+ 
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  +          +L+   C++G        L  M++ G +PD++ Y+  I G     
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D A+ L + + A GC P+ ++Y I++ GLC A+R  +AEDL ++MI +G   +  T+N
Sbjct: 454 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 513

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LIN  CK G ++QA+  L +ML     SPD+I+Y+T+IDGL  AG+ D+A+ L N M  
Sbjct: 514 TLINFLCKKGLVEQAIELLKQML-VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +PN I + ++ + L +  R    +  F  +++  ++ D  ++ A+IS+         
Sbjct: 573 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 632

Query: 659 AFEVLKEM 666
           A E L  M
Sbjct: 633 AIEFLAYM 640



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 263/572 (45%), Gaps = 35/572 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           M +   RA ++   R LA  V      + P A  +  ++R L + G + +A  + D++ R
Sbjct: 133 MVAGYCRAGQLESARRLAAAVP-----VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G C P    Y+ +LEA C+          L+++   G   D      +L   C+ G  D
Sbjct: 188 RG-CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +AL +  ++   G   + V ++ +L       +WG V    EL+E M       N  TF 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ---ELMEEMVRMACPPNIVTFN 303

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI    +    ++  ++  +M + G   D  MY  II G+CK   LE+A ++ + M   
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 235 GITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G+ P+    + L+   CS E   E   L+ E++ D+D     +  N ++     NG +D+
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDVTFNILVDFFCQNGLVDR 422

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
              LL+ M++                G + P+  ++  +IN   K+G +D A+ L + MT
Sbjct: 423 VIELLEQMLE---------------HGCM-PDVITYTTVINGFCKEGLIDEAVMLLKSMT 466

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  N   Y  ++ GLC++ R  ++ +L+ +M + G      T N++   LC++  V 
Sbjct: 467 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+ L+++M V G  P +   + +I  L K GK  EA   L  MV +G  P+ + YS+  
Sbjct: 527 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 586

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L    R++  +++F +I       D V YN +IS LCK      A +    M++ G +
Sbjct: 587 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 646

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           P+ +TY +LI G    G + +A   L+ +  K
Sbjct: 647 PNESTYTILIRGLASEGFVKEAQEMLTELCSK 678



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 225/552 (40%), Gaps = 86/552 (15%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELI 158
           + YT  P+++  C  G+   AL+V +E+   G      ++ ++L A  + G    A  ++
Sbjct: 158 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 217

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E +      L+     ++++    +  VD+AL L   +   G   D   Y+ ++ GLC  
Sbjct: 218 EDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 277

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
           K+     +L  EM      P                               N +T   N+
Sbjct: 278 KRWGCVQELMEEMVRMACPP-------------------------------NIVTF--NT 304

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L  NG  ++ + +L  M++                   +P+   +  II+ + K+G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEH----------------GCTPDIRMYATIIDGICKEG 348

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L++A  +   M   G   NV  YN L+ GLC++ R EE+ ELL EM +        T N
Sbjct: 349 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C+   V   + L+ +M   G  P V   T +I   CK G   EA   L  M   
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468

Query: 459 GFLPDIVCYSAAIGGLIDIKR-----------------------------------VDLA 483
           G  P+ + Y+  + GL   +R                                   V+ A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + + 
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             + G I++ +     + +    S D + Y  +I  LC  G  + AI     M   GC P
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRS-DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 647

Query: 604 NRITFMALITGL 615
           N  T+  LI GL
Sbjct: 648 NESTYTILIRGL 659



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E A+ + +++   GL  PN   YN LL+ LC +   +  E  L EM D     D  T
Sbjct: 348 GHLEVAHEILNRMPSYGL-KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 406

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  ++++HG + + + ++ ++  F K G +D+A  L++ M 
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 466

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A  L  +M + G   +   ++ +I  LCK   +E
Sbjct: 467 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G+    L +  +  ++ ++  T++ +SI 
Sbjct: 527 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 586

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G I++   +                   I   T+  +   ++ +I++L K G+ 
Sbjct: 587 SALSREGRINKVIQMFDN----------------IQDTTIRSDAVLYNAVISSLCKRGET 630

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + A+     M   GC+ N   Y  LI GL +   ++E+ E+L E+   G    H 
Sbjct: 631 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 685



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R      L   +++  C ++P     LI  L   GLVE+A  L  Q+   G C P
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSP 542

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SY+ +++ L K+   D     L  M + G   +    + +       G+ +K + +F
Sbjct: 543 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 602

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + I D     + V ++ ++ +  K GE ++A E +  M       NE T+ +LI G   +
Sbjct: 603 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 662

Query: 184 SRVDKALQLFDKMTKSG 200
             V +A ++  ++   G
Sbjct: 663 GFVKEAQEMLTELCSKG 679


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 220/448 (49%), Gaps = 25/448 (5%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWED 266
           I+G L K+      + L+ +M+ +GIT D  ILS LI   S  G+     ++L K +   
Sbjct: 78  ILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMG 137

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            + N +TL   ++++ L   G I QA          + +  +G  +          N  S
Sbjct: 138 YEPNVITL--TTLIKGLCLKGQIHQALQF------HDKVVALGFHL----------NKVS 179

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +IN L K G+   AL L R +       NV +YN +ID +C    + E+++L  EM 
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P   T N++    C    +  A +L  KM  +   P V    +L+   CK  +  
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA   L  M+++G  PD+  Y++ +     +K V+ A  +F  I   G  P++ +Y+I+I
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G CK ++V EA +LF EM    +IP V TYN LI+G CK G I  A+  +  M ++  G
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR--G 417

Query: 567 SP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            P D ITY +++D LC   + D AI L  +M+++G  P+  T+  L+ GLCK  R   A 
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + F  +  KG   D+ ++ A+I  F S 
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFCSH 505



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 241/524 (45%), Gaps = 51/524 (9%)

Query: 114 SGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           S  +   +S+  ++  +G   D  + SIL+  FS+ G+   +  ++ ++       N  T
Sbjct: 85  SNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVIT 144

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
              LI G   K ++ +ALQ  DK+   GF  +   Y  +I GLCK  Q   ALQL   + 
Sbjct: 145 LTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVD 204

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G  + P+                                  ++ N+I+  +     +++A
Sbjct: 205 GKLVQPN---------------------------------VVMYNTIIDSMCKVKLVNEA 231

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           ++L   M+                KG +SP+  +++ +I+     GK+  A  LF +M  
Sbjct: 232 FDLYSEMVS---------------KG-ISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                NV+ +N L+DG C   RL+E+  +L  M + G KP  FT NS+    C  ++V  
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A ++   +  +G  P +   +++I   CK  K  EA     +M     +PD+V Y++ I 
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL  + ++  AL+L  ++   G   D + YN I+  LCK  +V +A  L  +M  +G+ P
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TY  L++G CK+G ++ A +    +L K     DV  YT +I G C  G  D+++ L
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVK-GYILDVNIYTAMIQGFCSHGLFDESLDL 514

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
            ++MEE GC PN +T+  +I  L   D    A    R M  +G+
Sbjct: 515 LSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 241/511 (47%), Gaps = 30/511 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            LV   N L  Q   +    P+ + +  +L +L KS     V    ++M+  G   D   
Sbjct: 54  NLVSSFNRLLHQKNPK----PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
           L+ L+  +   GQ   + SV  +I+  G+    +  + L+      G++ +A +  +++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                LN+ ++  LI+G  K  +   ALQL  ++       +  MY+ II  +CK K + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNS 278
            A  LYSEM   GI+PD    + LI+     G++     L  K I+E+ + N  T   N 
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTF--NI 287

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADV-GVEMLM------------------IFKGT 319
           ++        + +A N+L  M+K     DV     LM                  I +  
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+PN  S+ I+I+   K  K+D A++LF+EM     + +V  YN+LIDGLC   ++  + 
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L+ EM + G      T NS+   LC+   V  A+ L+ KM+ +G +P +   T L+  L
Sbjct: 408 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK+G+  +A     D++ +G++ D+  Y+A I G       D +L+L   +  +GC P+ 
Sbjct: 468 CKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           V Y III  L       +AE L  EMIT+GL
Sbjct: 528 VTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 181/346 (52%), Gaps = 3/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   F  I+ +L+K       +SL R+M   G   ++ + + LI+      +   S+ +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELC 440
           L ++ + G++P   TL ++ + LC +  +  AL    K+   G H   V + TL I  LC
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTL-INGLC 188

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+   A + L  +  +   P++V Y+  I  +  +K V+ A +L+ ++ + G  PDVV
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +ISG C   ++ +A DLFN+MI + + P+V T+N+L++G+CK   + +A   L+ M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + K+   PDV TY +L+D  C+    + A  ++N + ++G  PN  ++  +I G CK  +
Sbjct: 309 M-KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A+  F+ M    + PD+  + +LI           A +++ EM
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 190/380 (50%), Gaps = 3/380 (0%)

Query: 288 SIDQAYNLLQAMIKGEPIADV-GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           SI Q   +L +++K    + V  +   M F G ++ +     I+IN   + G+  L+ S+
Sbjct: 71  SIFQFGKILGSLVKSNHYSTVVSLHRQMEFNG-ITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             ++ ++G   NV     LI GLC   ++ ++ +   ++   GF     +  ++   LC+
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 AL L+R++  +  +P V     +I  +CK     EAF   ++MV +G  PD+V 
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+A I G   + ++  A +LF  +      P+V  +NI++ G CK +R+ EA+++   M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            +G+ P V TYN L++ +C    +++A    +  + +   +P++ +Y+ +I G C   + 
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNT-ISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D+A+ L+ EM      P+ +T+ +LI GLCK  +   AL     M ++G+  D   + ++
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           + A         A  +L +M
Sbjct: 429 LDALCKNHQVDKAIALLTKM 448



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 1/330 (0%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D K +L  S  R + Q     ++F +  ++  L  SN       L R+ME +G       
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           L+ +  C  +      + +++ K+   G+EP V   T LIK LC  G+  +A +F   +V
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             GF  + V Y   I GL  + +   AL+L R +      P+VV YN II  +CK + V 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA DL++EM++KG+ P V TYN LI+G+C  G +  A    ++M+  E+ +P+V T+  L
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF-ENINPNVYTFNIL 288

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +DG C   R  +A  +   M ++G  P+  T+ +L+   C       A   F  + ++G+
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            P++  +  +I  F        A  + KEM
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 156/651 (23%), Positives = 274/651 (42%), Gaps = 76/651 (11%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN ++ +LC+   +      L  M   GW  D YT   L+  YC + Q D A  +F+++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G+  + V ++ L+  F + G +D+A EL   MD  ++ +    +  L+ G  K  R 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRG 128

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           ++ L +  +M + G+      Y  ++   C  ++ + A ++  EM   G+ P     + +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 247 ITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGE 303
           I +   EG ++  L V E+ + R         N++++   + G + +A  LL  M + G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG- 247

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                           V+P+  +++++I     DG ++ A  L R M   G + + + YN
Sbjct: 248 ----------------VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 291

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI+ LC   R +++  L   +E  G KP   T NS+   LC+   V  A   + KM   
Sbjct: 292 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSA 351

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P     +  I+ LCK   + E   F+ +M+Q+   P  V Y+  I  L+  +   L 
Sbjct: 352 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 411

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
              + ++ + GC PDVV Y   +   C   R+ EAE++  EM   G+      YN L++G
Sbjct: 412 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 471

Query: 544 WCKSGNIDQAMLCLSRM------------------------------------------- 560
               G  D A+  L +M                                           
Sbjct: 472 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 531

Query: 561 --------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
                   ++K    P+  TY+++++G    GR ++A  L + M+E   + N   + AL+
Sbjct: 532 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           T  CK  R   A V    M + G  P +  +  L+S  + E     A E+ 
Sbjct: 592 TCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIF 642



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 268/642 (41%), Gaps = 54/642 (8%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PLR  AQDVV         +   LI      G ++EA  LF ++ +     P+ + Y  L
Sbjct: 73  PLRGFAQDVV---------SYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAAL 118

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++ LCK+   +   + L+ M++ GW         ++   C   +  +A  +  E+ + G 
Sbjct: 119 VKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGL 178

Query: 133 VDEHVFSILLV-AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V    ++ A+ K G +  A  ++E M     + N  T+  L+ GF  + +V KA+ 
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L +KM   G   DA  Y+++I G C +  +E A +L   M+G G+  D    + LI +  
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298

Query: 252 DEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
            +G         +  E R +    +  NS++  L  +G +D A+  L+ M+      D  
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358

Query: 310 -----VEMLMIFKGT--------------VSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                +E L   KG+              V P+T ++ I+I+ LLK+    L    + EM
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +V  Y   +   C   RL E+  +L EM ++G        N++          
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKH--------------GKAME---AFRFLT 453
             A++++++M      P      +L++ L +                KA+E    F    
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 538

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M +  FLP+   YS+ + G  +  R + A  L   +       +   Y  +++  CK++
Sbjct: 539 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 598

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R  +A  L   MI  G IP + +Y  L++G    G  D+A         K+  SPD I +
Sbjct: 599 RYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY-SPDEIVW 657

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             +IDGL   G  D +  +   +E   C P+  T+  L   L
Sbjct: 658 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 195/459 (42%), Gaps = 54/459 (11%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+ +I  LC+   L  AL+  S M  SG  PD    + LI                    
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVG------------------ 55

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                   C +          +D A +L   M    P+     +++            S+
Sbjct: 56  -------YCRT--------NQVDVARDLFDKM----PLRGFAQDVV------------SY 84

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I    + G++D A+ LF EM Q     ++ +Y  L+ GLC + R EE   +LR M+E
Sbjct: 85  AALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKE 140

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G++P+     ++    C  +    A  ++++M  +G  P V   T +I   CK G+  +
Sbjct: 141 LGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 200

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R L  M   G  P++  Y+A + G  +  +V  A+ L   +   G  PD V YN++I 
Sbjct: 201 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIR 260

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C    +  A  L   M   GLI    TYN LIN  CK G  DQA   L   LE     
Sbjct: 261 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA-CSLFDSLETRGIK 319

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+ +T+ +LI+GLC +G+ D A     +M   GC P+  T+ + I  LCK    +  L  
Sbjct: 320 PNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 379

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M +K +KP    +  +I   L E N  L      EM
Sbjct: 380 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 40/95 (42%)

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY  +I  LC       A+   + M   G  P+  TF +LI G C+ ++   A   F  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +G   D+  + ALI  F        A E+  EM
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM 107


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 271/571 (47%), Gaps = 24/571 (4%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIER 160
           T   LL+    +G       VF+E+ D   V  + + ++ ++ A  K G+VD   +++  
Sbjct: 195 TCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSD 254

Query: 161 MDDCNIRLNEKT--FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           +    ++ +     + +L+    K  RVD+A++L  +M +S  A     + ++I GL ++
Sbjct: 255 LIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRS 314

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLC 276
            +      L  EM+G GITP+  I ++LI     +G  T  ++   E   +++ +  +  
Sbjct: 315 DRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL- 335
           N I R L   G +++A  +L+ M+        G+                F+ ++  LL 
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGL----------------FNSVVAGLLQ 418

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G+L+  + L  EM + G   N  L       LC   R +E+  +  +M E G      
Sbjct: 419 RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIA 478

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++   LC  +++ GA  ++R M  +G E       ++I+  CK  K  EA +   DM
Sbjct: 479 TSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM 538

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +++GF PD   +++ I    D+ +++ AL L   +   G  PDVV+Y  II G CKA+ +
Sbjct: 539 IRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDI 598

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A +  NE++  GL P+   YN LI G+ ++GNI  A+  L  M E     P  +TY +
Sbjct: 599 QKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM-ESIGIQPTNVTYCS 657

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+  +C AG  D+A  ++ +  +       + +  +I GLCK  +   A+ +F  M+ + 
Sbjct: 658 LMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRS 717

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + P+   +  L+ A+    N   A ++  EM
Sbjct: 718 IPPNKITYTTLMYAYCKSGNNEEASKLFDEM 748



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 169/626 (26%), Positives = 285/626 (45%), Gaps = 30/626 (4%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPG--ALGFLIRCLGSVGLVEEANMLFDQVKREGL 61
           + S AR    L V A  V+ SR   SP       L+  L   G +     +FD+++    
Sbjct: 166 VTSSARGSLRLAVDAFHVLSSR-RASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKT 224

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW----GYDKYTLTPLLQVYCNSGQF 117
             PN YSY  +++ALCK   VD     L ++   G     G   Y L  L+   C SG+ 
Sbjct: 225 VTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNL--LMDALCKSGRV 282

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D+A+ +   + +       V F IL+    +     +   L+  M+   I  NE     L
Sbjct: 283 DEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNEL 342

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I    +K    +A++LFD+M      S A  Y++I   LCK  ++E A ++  EM  +G+
Sbjct: 343 IDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGM 402

Query: 237 TPDFEILSKLITSC-SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA--Y 293
           T    + + ++       G L  +V+ I E             + R +  N ++  A   
Sbjct: 403 TIHSGLFNSVVAGLLQRTGRLESVVRLISE------------MVKRGMKPNDALMTACTK 450

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            L Q     E    VG+ + M+ KG +  N ++ + +I+ L +   +  A  + R M   
Sbjct: 451 QLCQGRRHQEA---VGIWLKMLEKG-LCINIATSNALIHGLCEGKNMKGATEVLRTMVNK 506

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +   YN +I G C  +++EE+ +L  +M   GFKP  +  NS+    C    +  A
Sbjct: 507 GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEA 566

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L+L+ +M+++G +P V     +I   CK     +A  +L +++  G  P+ V Y+A IGG
Sbjct: 567 LHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                 +  A+ +   + + G  P  V Y  ++  +C A  V EA+ +F +     +   
Sbjct: 627 YGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  Y ++I G CK G +D+AM     M  + S  P+ ITYTTL+   C +G  ++A  L+
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEMRSR-SIPPNKITYTTLMYAYCKSGNNEEASKLF 745

Query: 594 NEMEEKGCAPNRITFMALITGLCKCD 619
           +EM   G  P+ +++  L+TG  + D
Sbjct: 746 DEMVSSGIVPDNVSYNTLVTGFSQVD 771



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 256/544 (47%), Gaps = 27/544 (4%)

Query: 19  QDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
            D++ +    S GA+ +  L+  L   G V+EA  L  +++ E    P+  ++  L+  L
Sbjct: 253 SDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRME-ESRVAPSMVTFGILINGL 311

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            +S     V   L+EM+  G   ++     L+  +C  G F +A+ +F+E++        
Sbjct: 312 KRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTA 371

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS-RVDKALQLFD 194
           V ++++  A  K GE+++A  ++E M    + ++   F  ++ G ++++ R++  ++L  
Sbjct: 372 VTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLIS 431

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M K G   + A+       LC+ ++ + A+ ++ +M   G+             C +  
Sbjct: 432 EMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGL-------------CINIA 478

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-SIDQ-AYNLL-QAMIKGEPIAD-VGV 310
               L+  + E +++   T     ++R +V+ G  +D   YN++ Q   K   I + + +
Sbjct: 479 TSNALIHGLCEGKNMKGAT----EVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKL 534

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
              MI KG   P+   F+ II+     GK++ AL L  +M   G   +V  Y  +IDG C
Sbjct: 535 RDDMIRKG-FKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYC 593

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +  ++++ E L E+   G KP     N++     R  ++ GA+ ++  M   G +P   
Sbjct: 594 KAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNV 653

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               L+  +C  G   EA        +      +V Y+  I GL  I ++D A+  F ++
Sbjct: 654 TYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEM 713

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            +    P+ + Y  ++   CK+    EA  LF+EM++ G++P   +YN L+ G+ +  ++
Sbjct: 714 RSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSL 773

Query: 551 DQAM 554
           D+A+
Sbjct: 774 DKAI 777



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 207/474 (43%), Gaps = 30/474 (6%)

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLC 276
            L +A+  +  +     +P  +  + L+ + +  G L    K   E RD  T+T      
Sbjct: 173 SLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSY 232

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG----------------VEMLMIFKGT- 319
            S+++ L   G +D  + +L  +I        G                V+  +  KG  
Sbjct: 233 TSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRM 292

Query: 320 ----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
               V+P+  +F I+IN L +  +     +L REM  +G   N  + N LID  C     
Sbjct: 293 EESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHF 352

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG---HEPWVKHN 432
            E+  L  EM     K T  T N + R LC+  ++  A  ++ +M   G   H      N
Sbjct: 353 TEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLF--N 410

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           +++   L + G+     R +++MV+ G  P+    +A    L   +R   A+ ++  +  
Sbjct: 411 SVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLE 470

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G C ++   N +I GLC+ + +  A ++   M+ KG+     TYN++I G CK   I++
Sbjct: 471 KGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEE 530

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A+     M+ K    PD   + ++I   C  G+ ++A+ L  +M+ +G  P+ +++  +I
Sbjct: 531 ALKLRDDMIRK-GFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTII 589

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G CK    + A  +   +   G+KP+  ++ ALI  +    N   A  VL  M
Sbjct: 590 DGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM 643


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 256/532 (48%), Gaps = 54/532 (10%)

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLV 143
            E R   +Q Y   + +  L  LL   C +G+F+++L     +++ G+  + +  + L+ 
Sbjct: 54  AEARPAHLQSYD--FRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIK 111

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            F  +  ++KA  ++E ++  +   +   +  +I GF K +R++ A Q+ ++M   GF  
Sbjct: 112 GFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLP 170

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y+++IG LC  ++L +AL++  ++              L+ +C             
Sbjct: 171 DIVTYNIMIGSLCNRRKLGLALKVLDQL--------------LLDNCMPT---------- 206

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                V T T+L  +     +  G I++A  LL+ M+                +G + P+
Sbjct: 207 -----VITYTILIEAT----IVEGGINEAMKLLEEMLA---------------RGLL-PD 241

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++ II  + K+G ++ A  L   +T  GC  +V  YN L+    N  + +E  +L+ 
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G +P   T + +   LCR   +  A+++++ M  +   P       LI  LCK G
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A   +  M+  G LPDIV Y+  +  L      + ALE+F  +   GC P+V +YN
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +IS L      + A  +   MI+KG+ P   TYN LI+  C+ G +++A+  L  M E+
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDM-EQ 480

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               P VI+Y  ++ GLC   R DDAI ++ EM EKGC PN  T++ LI G+
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 157/295 (53%), Gaps = 1/295 (0%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +VF YN +I G C  NR+E + ++L  M+  GF P   T N M   LC R+ +  AL ++
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            ++ +    P V   T+LI+     G   EA + L +M+  G LPD+  Y+A I G+   
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             V+ A EL   + + GC PDV++YNI++       +  E E L  EM ++G  P+  TY
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 315

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++LI+  C+ G ID+A+  L  M+EKE  +PD  +Y  LI  LC  GR D AI + + M 
Sbjct: 316 SILISSLCRFGRIDEAISVLKVMIEKEL-TPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             GC P+ + +  ++  LCK      AL  F  ++  G  P++  +  +ISA  S
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 225/477 (47%), Gaps = 66/477 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++YN ++   CK   ++     L  M+  G+  D  T   ++   CN  +   AL V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++++                                +D+C   +   T  +LI   + +
Sbjct: 195 LDQLL--------------------------------LDNCMPTVITYT--ILIEATIVE 220

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
             +++A++L ++M   G   D   Y+ II G+CK   +E A +L + +   G  PD   +
Sbjct: 221 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISY 280

Query: 241 EILSKLITSCS--DEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            IL +   +    DEGE   LV E++    + +  T ++L +S+ R     G ID+A ++
Sbjct: 281 NILLRAFLNQGKWDEGE--KLVAEMFSRGCEPNKVTYSILISSLCRF----GRIDEAISV 334

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ MI+ E                ++P+T S+D +I+ L K+G+LDLA+ +   M   GC
Sbjct: 335 LKVMIEKE----------------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + ++  YN ++  LC +    ++ E+  ++   G  P   + N+M   L    D   AL 
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 416 LVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           +V  M  +G +P  + +N+ LI  LC+ G   EA   L DM Q GF P ++ Y+  + GL
Sbjct: 439 MVPAMISKGVDPDEITYNS-LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             ++R+D A+ +F ++   GC P+   Y ++I G+  A    EA +L N + ++ +I
Sbjct: 498 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 210/471 (44%), Gaps = 55/471 (11%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK  +   +L     +   G TPD  + +KLI             K  +  +++   +  
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLI-------------KGFFNFKNIEKAS-- 123

Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPI-ADVGVEMLMIFKGTVSPNTSSFDIIIN 332
              +M IL S+   D  AYN ++    K   I A   V   M  +G + P+  +++I+I 
Sbjct: 124 --RVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFL-PDIVTYNIMIG 180

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           +L    KL LAL +  ++    CM  V  Y  LI+       + E+ +LL EM   G  P
Sbjct: 181 SLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N++ R +C+   V  A  L+  +  +G +P V    +L++     GK  E  + +
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G  P+ V YS  I  L    R+D A+ + + +      PD  +Y+ +IS LCK 
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------ 560
            R+  A  + + MI+ G +P +  YN ++   CK+GN +QA+   +++            
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420

Query: 561 ----------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
                                 +  +   PD ITY +LI  LC  G  ++AI L ++ME+
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            G  P  I++  ++ GLCK  R   A+  F  M EKG +P+   ++ LI  
Sbjct: 481 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 531



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 2/302 (0%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++  C + +  ES   L  +   G+ P       + +     +++  A  ++  +    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            EP V     +I   CK  +   A + L  M   GFLPDIV Y+  IG L + +++ LAL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           ++   +    C P V+ Y I+I        + EA  L  EM+ +GL+P + TYN +I G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +++A   ++ +  K    PDVI+Y  L+      G+ D+   L  EM  +GC PN
Sbjct: 253 CKEGMVERAAELITSLTSK-GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 311

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           ++T+  LI+ LC+  R   A+   ++M EK + PD + +  LISA   E    LA  ++ 
Sbjct: 312 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 371

Query: 665 EM 666
            M
Sbjct: 372 YM 373



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 161/337 (47%), Gaps = 2/337 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++N   K GK + +L     +   G   +V L   LI G  N   +E++  ++ E+ ES 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P  F  N++    C+   +  A  ++ +M+ +G  P +    ++I  LC   K   A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L  ++ +  +P ++ Y+  I   I    ++ A++L  ++ A G  PD+  YN II G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK   V  A +L   + +KG  P V +YN+L+  +   G  D+    ++ M  +    P+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPN 311

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
            +TY+ LI  LC  GR D+AI +   M EK   P+  ++  LI+ LCK  R   A+    
Sbjct: 312 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 371

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M   G  PD+  +  +++A     N   A E+  ++
Sbjct: 372 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R    VG     R   +Q ++    H   L+   CK GK  E+  FL  +V +G+ PD++
Sbjct: 45  RNAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVI 104

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  I G  + K ++ A  +   + +H   PDV AYN +ISG CK  R+  A  + N M
Sbjct: 105 LCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRM 163

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G +P + TYN++I   C    +  A+  L ++L  ++  P VITYT LI+   + G 
Sbjct: 164 KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL-LDNCMPTVITYTILIEATIVEGG 222

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            ++A+ L  EM  +G  P+  T+ A+I G+CK      A      +  KG KPD+  +  
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 646 LISAFLSE 653
           L+ AFL++
Sbjct: 283 LLRAFLNQ 290



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 181/385 (47%), Gaps = 23/385 (5%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+ +R +    L+VL Q ++   C  +      LI      G + EA  L +++   G
Sbjct: 179 IGSLCNRRKLGLALKVLDQ-LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L +P+ Y+YN ++  +CK   V+     +  +   G   D  +   LL+ + N G++D+ 
Sbjct: 238 L-LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +  E+   G     V +SIL+ +  ++G +D+A  +++ M +  +  +  ++  LI  
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K+ R+D A+ + D M  +G   D   Y+ I+  LCKN     AL+++++++G G  P+
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416

Query: 240 FEILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + +I+   SC D      +V  +   + V+   +  NS++  L  +G +++A  LL
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMI-SKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M                 +    P   S++I++  L K  ++D A+ +F EM + GC 
Sbjct: 476 DDM----------------EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 519

Query: 357 QNVFLYNNLIDGLCNSNRLEESYEL 381
            N   Y  LI+G+  +    E+ EL
Sbjct: 520 PNETTYILLIEGIGFAGWRTEAMEL 544



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI CL   GLVEEA  L D +++ G   P   SYN +L  LCK   +D       EM + 
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGF-RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 516

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
           G   ++ T   L++    +G   +A+ + N +     + +  F  L   F
Sbjct: 517 GCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTF 566


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 267/574 (46%), Gaps = 26/574 (4%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS--CSVDLVEMR--LK 90
           FL++CL     V+   +LF+ + + G   PN ++Y  ++   C+   CSVD+      L 
Sbjct: 176 FLLKCLVEDNRVDGVRLLFEVLIKFGP-RPNIHTYTIMMNFFCRGVGCSVDIRRASEILG 234

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWG 149
           ++   G   +  T    ++  C  G F  A  +   +      ++ H F+ ++    + G
Sbjct: 235 KIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGG 294

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +D+A E+ + M +  I  +  ++ +LI GF +K RVD+A ++F +M  SG   +   Y 
Sbjct: 295 ILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYS 354

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           ++I G CK  +++ AL+++ EMK SGI PD    S LI     +G++   +K  WE+   
Sbjct: 355 ILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK-FWEE--- 410

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                        + SN     A+N   L++   K +  A+   E  ++ K  + P+T +
Sbjct: 411 -------------MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIA 457

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            + I++   +    + AL+L  +  + G   N + YN  I  +C  +  E++ +LL  M 
Sbjct: 458 CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVML 517

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           +    P     +++  C  +R +   A+ L  KM   G    VK  T+LI       K  
Sbjct: 518 KRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMD 577

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A+R    M +    PD + Y++ + G  +   +  A  LF ++   GC P+VV Y   I
Sbjct: 578 VAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +   K  +  +A  L+ +M  +G+ P    Y +LI  +C +G +++A      M ++   
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +P+V+ YT LI+      + D A  L+ EM  KG
Sbjct: 698 TPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 241/516 (46%), Gaps = 21/516 (4%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G  I+ L  VGL   A  L   + R+   + NN+ +N ++  LC+   +D      KEM+
Sbjct: 249 GTYIKGLCKVGLFGVAWRLIQNLCRKNQPL-NNHCFNAVIYGLCQGGILDEASEVFKEMK 307

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVD 152
           + G   D Y+ + L+  +C  G+ D+A  VF E+ + G +   + +SIL+  F K G VD
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA E+ E M +  I  +  ++ +LI GF +K  +D A++ +++MT + F+  A  Y  +I
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVN 270
            G  K+KQ   AL+ +  M+  G+ PD    + +++    + +    L + E +++  V+
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                 N  +  +      ++A  LL  M+K                  V P+  ++  +
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKR----------------NVLPDVVNYSTL 531

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   K    + A+ LF +MT++G   NV  Y  LI+   +  +++ +Y L + M+ES  
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P      S+    C   ++  A  L  +M  +G  P V   T  I E  K  K  +A +
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK 651

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGL 509
               M + G  PD + Y+  I    +   ++ A  LF ++   G C P+VV Y  +I+  
Sbjct: 652 LYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSY 711

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
            K  +  +AE L+ EM  KGL    ++   +   WC
Sbjct: 712 IKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 255/615 (41%), Gaps = 81/615 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+   S  ++E AN +F + K +G+ + N  S N LL+ L +   VD V +  + +  +
Sbjct: 142 LIKVFASNSMLEHANYVFVRAKDDGIEL-NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKF 200

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   + +T T ++  +C         SV                          ++ +A 
Sbjct: 201 GPRPNIHTYTIMMNFFCRG----VGCSV--------------------------DIRRAS 230

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           E++ ++       N  T+   I G  K      A +L   + +     +   ++ +I GL
Sbjct: 231 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 290

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C+   L+ A +++ EMK SGI PD                             V + ++L
Sbjct: 291 CQGGILDEASEVFKEMKNSGILPD-----------------------------VYSYSIL 321

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            +   R     G +DQA  + + M                    + PN  S+ I+I+   
Sbjct: 322 IDGFCR----KGRVDQASEVFKEMRNS----------------GILPNIYSYSILIDGFC 361

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G++D AL +F EM   G + +V+ Y+ LIDG C    ++ + +   EM  + F P+ F
Sbjct: 362 KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF 421

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
              S+ +   + +    AL   R M+  G  P       ++   C+     +A       
Sbjct: 422 NYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 481

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            + G   +   Y+  I  +      + AL+L   +      PDVV Y+ +IS   K    
Sbjct: 482 QENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNS 541

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A  LF +M   G+  +V TY +LIN +     +D A      M E     PD I YT+
Sbjct: 542 EKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV-YPDQIAYTS 600

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+ G C  G    A  L++EM  +GC+PN +T+   I    K ++   A   +  MKE+G
Sbjct: 601 LVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERG 660

Query: 636 MKPDMFVFVALISAF 650
           + PD  ++  LI+AF
Sbjct: 661 VYPDQILYTMLIAAF 675



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 153/380 (40%), Gaps = 55/380 (14%)

Query: 309 GVEMLMIFKGTVS-----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV---- 359
           GV   + FKG V       + +SF III+T    G       L R++      +N     
Sbjct: 65  GVAREIKFKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGE 124

Query: 360 ------------FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
                        +++ LI    +++ LE +  +    ++ G +    + N + +CL   
Sbjct: 125 LVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVED 184

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V G   L   +   G  P +   T+++   C+                          
Sbjct: 185 NRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCR-------------------------- 218

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
              +G  +DI+R   A E+   I   G  P+VV Y   I GLCK      A  L   +  
Sbjct: 219 --GVGCSVDIRR---ASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCR 273

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRP 586
           K    +   +N +I G C+ G +D+A      M  K SG  PDV +Y+ LIDG C  GR 
Sbjct: 274 KNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM--KNSGILPDVYSYSILIDGFCRKGRV 331

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D A  ++ EM   G  PN  ++  LI G CK  R   AL  F  MK  G+ PD++ +  L
Sbjct: 332 DQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSIL 391

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I  F  + +   A +  +EM
Sbjct: 392 IDGFCRKGDMDSAIKFWEEM 411



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 3/147 (2%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + + +SR +    A   L+    + G +  A  LFD++ REG C PN  +Y C +   
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG-CSPNVVTYTCFINEY 640

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K    +      ++M++ G   D+   T L+  +CN+G+ ++A ++F+E+   G    +
Sbjct: 641 LKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPN 700

Query: 137 V--FSILLVAFSKWGEVDKACELIERM 161
           V  ++ L+ ++ K  + D+A +L E M
Sbjct: 701 VVMYTCLINSYIKLNKRDQAEKLYEEM 727


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 258/591 (43%), Gaps = 51/591 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    YN +L +L K   +D ++    E+ +     + YT   ++  YC  G   +A   
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++I+  G   D   ++ L++   +   VD A E+   M     + NE ++  LIHG  +
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+++AL+LF  MT+         Y V+I  L  + +   AL L++EMK  G  P+   
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN--- 333

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                     V+T T+L +     L     +D+A  +L  M + 
Sbjct: 334 --------------------------VHTYTVLIDG----LCKENKMDEARKMLSEMSE- 362

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG + P+  +++ +I+   K+G +D A  +   M    C  N   Y
Sbjct: 363 --------------KGLI-PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI GLC   ++ ++  LL +M E    P+  T NS+    C+  D+  A  L+  M  
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     ++ I  LCK G+  EA      +  +G   + V Y+A I G   + ++D+
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L   +    C P+   YN++I GLCK +++ EA  L  +M+T G+ P+V TY +LI 
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              K G  D A+   + M+      PDV TYT  +      G  ++   +  +M E+G  
Sbjct: 588 EMLKDGAFDHALKVFNHMVSL-GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P+ +T+  LI G  +      A    + M + G KP +++   LI     E
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 182/706 (25%), Positives = 290/706 (41%), Gaps = 110/706 (15%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFM--------------SPGALGF--LIRCLGSVG 44
           M +IL RAR +     +   ++KS C +              + G   F   +RC  ++ 
Sbjct: 107 MLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTIL 166

Query: 45  LVEEANMLFDQVKREGL------CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           +     +L D++K   L        PN Y++N ++   CK  +V   E+   ++   G  
Sbjct: 167 MSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLH 226

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACEL 157
            D +T T L+  +C +   D A  VF  +   G   +E  ++ L+    + G +++A +L
Sbjct: 227 PDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              M + N     +T+ VLI+      R  +AL LF++M + G   +   Y V+I GLCK
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             +++ A ++ SEM   G+ P     + LI     E                        
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE------------------------ 382

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
                    G ID A+ +L  M                   +  PNT +++ +I  L K 
Sbjct: 383 ---------GMIDDAFEILDLM----------------ESNSCGPNTRTYNELICGLCKK 417

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K+  A++L  +M +     ++  YN+LI G C  N LE +Y LL  M E+G  P  +T 
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN----TLLIKELCKHGKAMEAFRFLT 453
           +     LC+   V  A  L   ++ +G    VK N    T LI   CK GK   A+  L 
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKG----VKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ +  LP+   Y+  I GL   K++  A  L   +   G  P VV Y I+I  + K  
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
               A  +FN M++ G  P V TY   ++ +   G +++    +++M E E   PD++TY
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE-EGILPDLVTY 652

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA---------- 623
           T LIDG    G    A      M + GC P+      LI  L   +R +           
Sbjct: 653 TVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712

Query: 624 -------------------ALVHFRMMKEKGMKPDMFVFVALISAF 650
                              AL  F  M E G   D+ ++ ALI+ F
Sbjct: 713 SNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGF 758



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 245/535 (45%), Gaps = 27/535 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ +L++ SK+  +D+   +   + +  I  N  TF  +++G+ K   V +A     K+ 
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           ++G   D   Y  +I G C+NK ++ A +++  M   G   +    + LI    + G + 
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 258 LLVK---EIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
             +K   ++ ED     V T T+L    +  L  +G   +A NL   M       + G E
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVL----IYALSGSGRKVEALNLFNEM------KEKGCE 331

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                     PN  ++ ++I+ L K+ K+D A  +  EM++ G + +V  YN LIDG C 
Sbjct: 332 ----------PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +++++E+L  ME +   P   T N +   LC+++ V  A+ L+ KM  +   P +  
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LI   CK      A+R L+ M + G +PD   YS  I  L    RV+ A  LF  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A G   + V Y  +I G CK  ++  A  L   M+    +P+  TYN+LI G CK   + 
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   +++ML      P V+TYT LI  +   G  D A+ ++N M   G  P+  T+ A 
Sbjct: 562 EASSLVAKMLTM-GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +                  M E+G+ PD+  +  LI  +        AF+ LK M
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 157/620 (25%), Positives = 272/620 (43%), Gaps = 31/620 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A RI     L  D+ +  C  +      LI  L   G   EA  LF+++K +G C P
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG-CEP 332

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N ++Y  L++ LCK   +D     L EM + G      T   L+  YC  G  D A  + 
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + +  +    +   ++ L+    K  +V KA  L+ +M +  +  +  T+  LIHG  K 
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           + ++ A +L   M ++G   D   Y V I  LCK  ++E A  L+  +K  G+  +  I 
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMI 300
           + LI      G++ +                   S++  ++++  +  +Y    L++ + 
Sbjct: 513 TALIDGYCKVGKIDV-----------------AYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K + + +    +  +    V P   ++ I+I  +LKDG  D AL +F  M  +G   +V 
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y   +    +   LEE  +++ +M E G  P   T   +     R      A + ++ M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL-TDMVQEGFLPDIVCYSAAIGGLIDIKR 479
              G +P +   ++LIK L    +  E    +  D V           S  I  +     
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN-------VNSVDIADVWKTLE 728

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            ++AL+LF  +  HGC  DV  Y  +I+G C+ +R+ EA+ L + M  +G+ PS   YN 
Sbjct: 729 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L++  CK G   +A+  +  M+E     P + +Y  L+ GL I G  + A  +++ +   
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVEN-GLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 847

Query: 600 GCAPNRITFMALITGLCKCD 619
           G   + + +  LI GL K D
Sbjct: 848 GYNYDEVAWKVLIDGLLKRD 867



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 214/487 (43%), Gaps = 63/487 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN L+   CK   ++     L  M + G   D++T +  +   C  G+ ++A ++
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+ +   G   +E +++ L+  + K G++D A  L+ERM +     N  T+ VLI G  K
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + ++ +A  L  KM   G       Y ++IG + K+   + AL++++ M   G  PD   
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 243 LSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            +  + +   +G   E+  ++ ++ E+    D+ T T+L +   R+    G   +A++ L
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL----GLTHRAFDFL 672

Query: 297 QAMIKGEPIADVGVEMLMI--------FKGTVS-------PNTSSFDIIINTLLKDGKLD 341
           + M+       + +  ++I         K T S        N +S DI    + K  + +
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIA--DVWKTLEYE 730

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
           +AL LF +M + GC  +V +Y  LI G C   RLEE+  L+  M+E G  P+    NS+ 
Sbjct: 731 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 790

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
            C C                                   K G   EA R +  MV+ G L
Sbjct: 791 DCCC-----------------------------------KLGVYAEAVRLVDAMVENGLL 815

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P +  Y   + GL      + A  +F  + + G   D VA+ ++I GL K   V E  +L
Sbjct: 816 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 875

Query: 522 FNEMITK 528
            + M  K
Sbjct: 876 IDIMEEK 882



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 2/160 (1%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E A  LF+++   G C  +   Y  L+   C+   ++  +  +  M++ G    +     
Sbjct: 730 EIALKLFEKMVEHG-CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 788

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           LL   C  G + +A+ + + ++++G +     + +L+      G  +KA  +   +  C 
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 848

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
              +E  + VLI G +K+  VD+  +L D M +    + A
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQA 888


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 255/544 (46%), Gaps = 58/544 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+V  +S   +KA  V+  ++ HG +   + F+ +L +  K G++++  ++   M   N
Sbjct: 245 VLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 304

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +E T+ +LI+GF K  ++++A +    M +SGF      ++ +I G CK    + A 
Sbjct: 305 IEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAW 364

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +  EM  +GI P                                  T   N  +R L  
Sbjct: 365 GVTDEMLNAGIYP---------------------------------TTSTYNIYIRALCE 391

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G ID A  LL +M                     +P+  S++ +++  +K  K   A  
Sbjct: 392 FGRIDDARELLSSM--------------------AAPDVVSYNTLMHGYIKMRKFVEASL 431

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF ++       ++  YN LIDGLC S  LE +  L  EM      P   T  ++ +   
Sbjct: 432 LFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFV 491

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPD 463
           +  ++  A  +  +M  +G +P    + T  + EL + G + +AFR   +MV E    PD
Sbjct: 492 KNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGEL-RLGDSEKAFRLHEEMVAEDHHAPD 550

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  Y+  I GL  +  ++ A+E  R I   G  PD V Y  +I G  +  R   A DL++
Sbjct: 551 LTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYD 610

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM++K L PSV TY +LI+G  K+G ++QA    + M +K    P+V+T+  L+ G+C A
Sbjct: 611 EMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLHGMCKA 669

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D+A     +MEE+G +PN+ ++  LI+  C  D+    +  ++ M +K ++PD +  
Sbjct: 670 GNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTH 729

Query: 644 VALI 647
            AL 
Sbjct: 730 RALF 733



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 220/492 (44%), Gaps = 29/492 (5%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + KKS  +K L  F+KM + GF       ++++  L  ++ +  A ++Y  M   GI P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 240 FEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + ++ SC   G+L   V +IW   + R++    +  N ++     +G +++A    
Sbjct: 274 VITFNTMLDSCFKAGDLER-VDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFH 332

Query: 297 QAMIK-GEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKD 337
             M + G P+       L+                  +    + P TS+++I I  L + 
Sbjct: 333 GDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEF 392

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++D A  L   M       +V  YN L+ G     +  E+  L  +++     P+  T 
Sbjct: 393 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTY 448

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++   LC   ++ GA  L  +M  Q   P V   T L+K   K+G    A     +M++
Sbjct: 449 NTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLR 508

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC-CPDVVAYNIIISGLCKAQRVA 516
           +G  PD   Y+    G + +   + A  L  ++ A     PD+  YN+ I GLCK   + 
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLE 568

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A +   ++   GL+P   TY  +I G+ + G    A      ML K   SP VITY  L
Sbjct: 569 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRL-SPSVITYFVL 627

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I G   AGR + A     EM+++G  PN +T  AL+ G+CK      A  +   M+E+G+
Sbjct: 628 IHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGI 687

Query: 637 KPDMFVFVALIS 648
            P+ + +  LIS
Sbjct: 688 SPNKYSYTILIS 699



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 196/462 (42%), Gaps = 92/462 (19%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN ++R+L  +  +++A  + + M+                   + P   +F+ ++++  
Sbjct: 242 CNIVLRVLRDSRMMNKAQEVYETMVMH----------------GIMPTVITFNTMLDSCF 285

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K G L+    ++ EM +     +   YN LI+G   S ++EE+     +M+ SGF  T +
Sbjct: 286 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPY 345

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + N +    C++     A  +  +M   G  P      + I+ LC+ G+  +A   L+ M
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM 405

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK---- 511
                 PD+V Y+  + G I +++   A  LF D+ A    P +V YN +I GLC+    
Sbjct: 406 AA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNL 461

Query: 512 --AQRVAE-----------------------------AEDLFNEMITKGL---------- 530
             AQR+ E                             A ++++EM+ KG+          
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR 521

Query: 531 --------------------------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
                                      P +  YN+ I+G CK GN+++A +   R + + 
Sbjct: 522 TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA-IEFQRKIFRV 580

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PD +TYTT+I G    GR   A  L++EM  K  +P+ IT+  LI G  K  R   A
Sbjct: 581 GLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQA 640

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   MK++G++P++    AL+       N   A+  L +M
Sbjct: 641 FQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 238/524 (45%), Gaps = 51/524 (9%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
             + ALS FN +++   +   V F  L  A  +         L ++M+   I  +  +  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI+ F +   VD    +  K+ K G   +   +  +I G C   ++  A++L+  M   
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G  P+    S +I      G+ T ++K                                 
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIK--------------------------------- 217

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL+ M        VG E          P+   ++ I++ L KD  ++ A+ +F +M   G
Sbjct: 218 LLEHM------KVVGCE----------PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTG 261

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            +  V  Y +LI GL N  R +E++ LL EM+     P     + +   +C+  +V  A 
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 321

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +++ M   G EP V     L+   C   + +EA +    M+ +G +PD+  +S  + G 
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              KR+D A +LF ++   G  PD V+YN +ISGLC+A+R  EAE+LF +M + G  P++
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY++L++   K G +DQAM  L R +E     PD++TY  +IDG+C  G+  DA  L+ 
Sbjct: 442 VTYSILLDCLSKQGYLDQAM-GLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFA 500

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           E+  KG  PN       I G+CK      A   FR M++    P
Sbjct: 501 ELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 213/464 (45%), Gaps = 50/464 (10%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           ++ AL  F+ M  +        +  +   L + K  +  + L  +M+ +GI+        
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGIS-------- 123

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                                 DV ++T+L N   R+      +D  +++L  +IK    
Sbjct: 124 ---------------------HDVLSLTILINCFCRLC----HVDYGFSVLGKIIK---- 154

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
             +G+E          PN  +F  +IN    +GK+  A+ LF  M   G   NV  Y+ +
Sbjct: 155 --LGLE----------PNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSII 202

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I GLC   +  E  +LL  M+  G +P     N++   LC+ + V  A+++  KM+  G 
Sbjct: 203 IKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P V   T LI  L   G+  EAF  L +M     +PD+V +S  I  +     V  A  
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           + + +   G  PDV  YN +++G C    V EA  +F  MI+KG +P V ++++L+NG+C
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K+  ID+A      M  +    PD ++Y TLI GLC A RP +A  L+ +M   G  PN 
Sbjct: 383 KAKRIDEAKQLFDEMTHR-GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +T+  L+  L K      A+  FR M+  G+KPD+  +  +I  
Sbjct: 442 VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 218/484 (45%), Gaps = 25/484 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +  L  AL +      V    K+M+  G  +D  +LT L+  +C     D   S
Sbjct: 88  LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +II  G     + FS L+  F   G++ +A EL + M     + N  ++ ++I G  
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  +  + ++L + M   G   D  +Y+ I+  LCK++ +  A+ ++ +MKG+GI P   
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAM 299
             + LI    + G        + E +  N M  L   + ++ I+   G + +A  +L+ M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                  ++GVE          P+ ++++ ++N      ++  A  +F  M   G M +V
Sbjct: 328 ------TEMGVE----------PDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F ++ L++G C + R++E+ +L  EM   G  P   + N++   LC+ +  + A  L + 
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G+ P +   ++L+  L K G   +A      M   G  PD+V Y+  I G+    +
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------ITKGLIPS 533
              A ELF ++   G  P+       I G+CK   + EA   F +M        +G I  
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551

Query: 534 VATY 537
            ATY
Sbjct: 552 RATY 555



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 152/359 (42%), Gaps = 36/359 (10%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           ALS F  M     + ++  +  L   L      +    L ++ME +G      +L  +  
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           C CR   V    +++ K+   G EP V   + LI   C  GK   A      MV  G+ P
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP 194

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++  YS  I GL  + +    ++L   +   GC PDVV YN I+  LCK + V EA  +F
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 523 NEMITKGLIPSVATYNLLING------W-----------------------------CKS 547
            +M   G++P+V TY  LI+G      W                             CK 
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKE 314

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G + +A + L  M E     PDV TY TL++G C+     +A  ++  M  KG  P+  +
Sbjct: 315 GEVSEARVILKTMTEM-GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  L+ G CK  R   A   F  M  +G+ PD   +  LIS       P  A E+ K+M
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 22/371 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   +I+ L  VG   E   L + +K  G C P+   YN +++ LCK   V+       +
Sbjct: 198 SYSIIIKGLCRVGKTTEVIKLLEHMKVVG-CEPDVVIYNTIVDRLCKDRLVNEAVHIFCK 256

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M+  G      T T L+    N G++ +A  + NE+     + + V FS+L+    K GE
Sbjct: 257 MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGE 316

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A  +++ M +  +  +  T+  L++G+  +  V +A ++F+ M   G   D   + +
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G CK K+++ A QL+ EM   G+ PD    + LI+    +    L  +E+++D   N
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLC-QARRPLEAEELFKDMHSN 435

Query: 271 TM--TLLCNSI-MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                L+  SI +  L   G +DQA  L +AM       + G++          P+  ++
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM------ENSGLK----------PDLVTY 479

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I+ + K GK   A  LF E++  G   N ++    IDG+C    L+E+++  R+ME+
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539

Query: 388 SGFKPTHFTLN 398
               P    +N
Sbjct: 540 DDCSPAQGCIN 550


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 253/546 (46%), Gaps = 24/546 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDC 164
           L+ VY      ++ LSVF+++I      +  +   IL +   K   + KA E+   M + 
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDK-DLMSKAVEVYRTMGEF 228

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I+    T+  L+  + K  +V + L L  +M + G A +   Y+V+I GL K  + E A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRI 282
             L  EM  +G+       + LI    ++G L   L ++E    +  +      NS +  
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +  A   L  M+    + DV                 S++ +I    + G L  
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDV----------------VSYNTLIYGYCRLGNLMK 392

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LF E+  I     +  YN L+DGLC    LE + +L  EM   G  P   T   +  
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 403 CLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             C+   +  A     +M  +G E     + T ++ EL K G    AF    +M+ +GF 
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEMLAKGFP 511

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD++ Y+  + GL  +  ++ A EL + + + G  PD V Y  II    +  R+ +  ++
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F EM++KGL PSV TY +LI+G    G +++A +  S M EK    P+VITY +LI+GLC
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLC 630

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
              R D A   + EM EKG  PN+ ++  LI   C     + AL  ++ M ++G++PD  
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690

Query: 642 VFVALI 647
              AL+
Sbjct: 691 THSALL 696



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 249/536 (46%), Gaps = 19/536 (3%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V   +  +L+  +SK   V++   + ++M    +  + K    ++     K  + KA+++
Sbjct: 162 VSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEV 221

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +  M + G       Y+ ++   CK  +++  L L SEM+  G  P+    + LI   S 
Sbjct: 222 YRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281

Query: 253 EGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           +GE       I E     +       N ++    + G + +A +L + M+          
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV---------- 331

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 KG  SP  ++++  I  L K G++  A+    +M     + +V  YN LI G C
Sbjct: 332 -----LKG-ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYC 385

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               L +++ L  E+      PT  T N++   LCR+ ++  A  L  +M  +G  P + 
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T+L+   CK G    A  F  +M+ EG   D   Y+  I G + +     A  L  ++
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD++ YN+++ GLCK   + EA +L  +M++ G+IP   TY  +I+   ++G +
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +       ML K   +P V+TYT LI G    GR + A + ++EM+EKG  PN IT+ +
Sbjct: 566 RKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI GLCK  R   A   F  M EKG+ P+ + +  LI+   +  N   A  + K+M
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 255/552 (46%), Gaps = 23/552 (4%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKE 91
           L  LI       +VE+   +FD++ +  L  P+  + N +L  L  K      VE+  + 
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLS-PDVKNCNRILRILRDKDLMSKAVEV-YRT 224

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M ++G      T   LL  YC  G+  + L + +E+   G     V +++L+   SK GE
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            ++A  LI  M    ++++  T+  LI+G+  K  + +AL L ++M   G +   A Y+ 
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
            I GLCK  ++  A+Q  S+M  + + PD    + LI      G L        E R + 
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404

Query: 271 TMTLLC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
               +   N+++  L   G ++ A  L               ++ MI +G ++P+  ++ 
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQL---------------KVEMINEG-IAPDIVTYT 448

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I++N   K G L +A   F EM   G   + + Y   I G         ++ L  EM   
Sbjct: 449 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 508

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GF P     N +   LC+  ++  A  L++KM   G  P     T +I    ++G+  + 
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                +M+ +G  P +V Y+  I G     R++ A   F ++   G  P+V+ YN +I+G
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK +R+ +A + F EM+ KG+ P+  +Y +LIN  C  GN  +A+    +ML++    P
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR-GVQP 687

Query: 569 DVITYTTLIDGL 580
           D  T++ L+  L
Sbjct: 688 DSCTHSALLKQL 699



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 227/504 (45%), Gaps = 44/504 (8%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN----KQLE 222
           R +E  FC ++    + + +  A  + +++     A+   + DV+IGG   +    K L+
Sbjct: 112 RRSEFVFCAILEILAQNNLMRSAYWVMERVIN---ANMHRIVDVLIGGCVSSEVSVKILD 168

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           + + +YS  K S +     +  K+I S      L+  VK              CN I+RI
Sbjct: 169 LLIWVYS--KKSMVEQCLSVFDKMIKS-----RLSPDVKN-------------CNRILRI 208

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L     + +A  + + M       + G++          P   +++ ++++  K GK+  
Sbjct: 209 LRDKDLMSKAVEVYRTM------GEFGIK----------PTIVTYNTLLDSYCKGGKVQQ 252

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
            L L  EM + GC  N   YN LI+GL      E++  L+ EM ++G K + +T N +  
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
               +  +  AL+L  +M ++G  P V      I  LCK G+  +A + L+DM+    LP
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+V Y+  I G   +  +  A  LF ++ +    P +V YN ++ GLC+   +  A+ L 
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EMI +G+ P + TY +L+NG CK G++  A      ML  E    D   Y T I G   
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH-EGLELDSYAYATRIVGELK 491

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G    A  L  EM  KG  P+ I +  ++ GLCK      A    + M   G+ PD   
Sbjct: 492 LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVT 551

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + ++I A L         E+  EM
Sbjct: 552 YTSIIHAHLENGRLRKGREIFYEM 575



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 27/480 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++   L  +++R G C PN+ +YN L+  L K    +  +  + EM   G     YT
Sbjct: 248 GKVQQGLDLLSEMQRRG-CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
             PL+  Y N G   +ALS+  E++  G       ++  +    K G +  A + +  M 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             N+  +  ++  LI+G+ +   + KA  LFD++           Y+ ++ GLC+  +LE
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           +A QL  EM   GI PD    + L+      G L++  +E +++     + L   +    
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM-AQEFFDEMLHEGLELDSYAYATR 485

Query: 283 LVSN---GSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +V     G   +A++L + M+ KG P                 P+   ++++++ L K G
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFP-----------------PDLIIYNVVVDGLCKLG 528

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L+ A  L ++M   G + +   Y ++I     + RL +  E+  EM   G  P+  T  
Sbjct: 529 NLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYT 588

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +      +  +  A     +M+ +G  P V     LI  LCK  +  +A+ F  +MV++
Sbjct: 589 VLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL---CKAQRV 515
           G  P+   Y+  I    ++     AL L++ +   G  PD   ++ ++  L   CK Q V
Sbjct: 649 GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 235/482 (48%), Gaps = 27/482 (5%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A+  F+ M           ++ I+  L   K+   A+ LY +M+ S + PD+  L+ +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 247 ITSCSDEGELTLLVKEIWE----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIK 301
           I      G++ L    + +        NT+TL  N++M+ L   G + +A     + + +
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITL--NTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G  ++ +                 S+ I+IN + K G+   A+ L R + +     NV +
Sbjct: 158 GFRLSGI-----------------SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI 200

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +ID LC    ++E+Y+L  EM   G  P   T + +    C    +  A++L+ +M 
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P +   T+L+  LCK GK  EA   L  MV+     D+V YS  + G   +  V+
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVN 320

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  +   G  PDV  Y+I+I+GLCK +RV EA +LF E+  K ++P   TY  LI
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +  CKSG I         ML++    PDVITY  LID LC  G  D AI L+N+M+++  
Sbjct: 381 DCLCKSGRISYVWDLFDEMLDR-GQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE--LNPPLA 659
            PN  TF  L+ GLCK  R + AL  F+ +  KG   ++  +  +I+    E  L+  LA
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499

Query: 660 FE 661
            +
Sbjct: 500 LQ 501



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 17/470 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++ N ++   C    V L    + ++   G+  +  TL  L++  C  G+  +AL  
Sbjct: 91  PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++++  G+    + + IL+    K GE   A  L+ R++  +IR N   + ++I    K
Sbjct: 151 HDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCK 210

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            + VD+A  L+ +M   G + D   Y +++ G C   QL  A+ L +EM    I PD   
Sbjct: 211 DTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYT 270

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-LVSNGSIDQAYNLLQAMIK 301
            + L+ +   EG+    VKE       N + ++  + + + +V   ++   Y L+  +  
Sbjct: 271 YTILVDALCKEGK----VKEAE-----NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNN 321

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + +     +M       V+P+   + I+IN L K  ++D AL+LF E+ Q   + +   
Sbjct: 322 AKRVFYTMTQM------GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y +LID LC S R+   ++L  EM + G  P   T N++   LC+   +  A+ L  KM+
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            Q   P V   T+L+  LCK G+   A  F  D++ +G+  ++  Y+  I GL     +D
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD 495

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            AL L   +  +GC  D V + I+I          +AE L  EMI +GL+
Sbjct: 496 EALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 239/538 (44%), Gaps = 51/538 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ + +N +L +L             K+M+      D +TL  ++  +C+ GQ   A S 
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++I+  G+    +  + L+      G+V +A    +++     RL+  ++ +LI+G  K
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L  ++ +     +  +Y +II  LCK+  ++ A  LY+EM G GI+PD   
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S L++     G+L                                 ++A +LL  M+  
Sbjct: 236 YSILVSGFCIVGQL---------------------------------NRAIDLLNEMVLE 262

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++P+  ++ I+++ L K+GK+  A ++   M +     +V +Y
Sbjct: 263 N----------------INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVY 306

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + L+DG C  N +  +  +   M + G  P     + M   LC+ + V  ALNL  ++  
Sbjct: 307 STLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQ 366

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P     T LI  LCK G+    +    +M+  G  PD++ Y+  I  L     +D 
Sbjct: 367 KNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDR 426

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ LF  +      P+V  + I++ GLCK  R+  A + F +++TKG   +V TY ++IN
Sbjct: 427 AIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMIN 486

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           G CK G +D+A+   SRM E      D +T+  +I         D A  L  EM  +G
Sbjct: 487 GLCKEGLLDEALALQSRM-EDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +  V+EA  LF+++ ++ + VP+  +Y  L++ LCKS  +  V     EM D 
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNM-VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR 402

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   D  T   L+   C +G  D+A+++FN++ D     + + F+ILL    K G +  A
Sbjct: 403 GQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA 462

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E  + +      LN +T+ V+I+G  K+  +D+AL L  +M  +G  SDA  ++++I  
Sbjct: 463 LEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRA 522

Query: 215 LCKNKQLEMALQLYSEMKGSGI 236
                + + A +L  EM   G+
Sbjct: 523 FFDKDENDKAEKLVREMIARGL 544


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 272/575 (47%), Gaps = 32/575 (5%)

Query: 83  DLVEM-RLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
           DL E  RL E     G   D Y  T L++  C  G+   A  V       G  VD   ++
Sbjct: 54  DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+  + ++G +D A  LI  M    +  +  T+  +I G   + RV  AL L D M + 
Sbjct: 114 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR 170

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           G       Y V++  +CK+     A+ +  EM+  G TP+    + +I     EG     
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR---- 226

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNG---SIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           V +  E             I+  L S G    I     +L+ +       DV V    + 
Sbjct: 227 VDDAKE-------------ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 273

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                PN  +FD+++    + G ++ A+ + ++M+Q GC  N  L N +I+ +C   R++
Sbjct: 274 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 333

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLL 435
           ++Y+ L  M   G  P   +  ++ R LCR      A  L+ +M  +   P  V  NT  
Sbjct: 334 DAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF- 392

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LC+ G   +A + +  M + G    IV Y+A + G     RVD ALELF ++    C
Sbjct: 393 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PC 449

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ + Y  +++GLC A+R+  A +L   MI K    +  T+N+L++ +C+ G +++AM 
Sbjct: 450 EPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAME 509

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            +++M+E    +P++IT+ TL+DG+      ++A+ L + +  KG + + IT+ +++  L
Sbjct: 510 LVNQMME-HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + DR   A+     +++ GM+P + ++  ++ A 
Sbjct: 569 SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFAL 603



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/616 (24%), Positives = 261/616 (42%), Gaps = 93/616 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +  G  V + ++YN L+   C+   +D     +  M   
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPV-DVFAYNTLVAGYCRYGRLDAARRLIASMP-- 136

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TP+++  C+ G+   AL++ ++++  G     V +++LL A  K     +A
Sbjct: 137 -VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M       N  T+ V+I+G  ++ RVD A ++ ++++  GF  D   Y  ++ G
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC  ++ +    L++EM      P+               E+T                 
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPN---------------EVTF---------------- 284

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +LQ M                 +   +PNT+  +I+IN +
Sbjct: 285 --DMLVRFFCRGGMVERAIQVLQQM----------------SQHGCTPNTTLCNIVINAI 326

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R E + ELL EM      P  
Sbjct: 327 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 386

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++  +  A+ L+  M   G    +     L+   C  G+   A     +
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +  E   P+ + Y+  + GL   +R+D A EL   +    C  + V +N+++S  C+   
Sbjct: 447 LPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGF 503

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V EA +L N+M+  G  P++ T+N L++G  K  N ++A+  L  ++ K   S D ITY+
Sbjct: 504 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYS 562

Query: 575 TLID-----------------------------------GLCIAGRPDDAIMLWNEMEEK 599
           +++D                                    LC     D AI  +  M   
Sbjct: 563 SVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSN 622

Query: 600 GCAPNRITFMALITGL 615
           GC PN  T++ LI GL
Sbjct: 623 GCMPNESTYIILIEGL 638



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 27/491 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI    ++ R   A ++      SG   D   Y+ ++ G C+  +L+ A +L + M    
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--- 136

Query: 236 ITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           + PD    + +I    D G +   L + +    R      +    ++  +  +    +A 
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 294 NLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           N+L  M  KG                  +PN  ++++IIN + ++G++D A  +   ++ 
Sbjct: 197 NVLDEMRAKG-----------------CTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 239

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   ++  Y  ++ GLC + R ++   L  EM +    P   T + + R  CR   V  
Sbjct: 240 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ ++++M   G  P      ++I  +CK G+  +A+ FL +M   G  PD + Y+  + 
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 359

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL    R + A EL  ++    C P+ V +N  I  LC+   + +A  L   M   G   
Sbjct: 360 GLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSV 419

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + TYN L++G+C  G +D A+     +       P+ ITYTTL+ GLC A R D A  L
Sbjct: 420 GIVTYNALVHGFCVQGRVDSAL----ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
              M +K C  N +TF  L++  C+      A+     M E G  P++  F  L+     
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535

Query: 653 ELNPPLAFEVL 663
           + N   A E+L
Sbjct: 536 DCNSEEALELL 546



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 242/556 (43%), Gaps = 56/556 (10%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R+     L  D+++  C  S      L+  +       EA  + D+++ +G C PN  +Y
Sbjct: 156 RVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-CTPNIVTY 214

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N ++  +C+   VD  +  L  +  YG+  D  + T +L+  C + ++D    +F E++D
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
              V +E  F +L+  F + G V++A +++++M       N     ++I+   K+ RVD 
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A    + M   G   D   Y  ++ GLC+  + E A +L  EM      P+         
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN--------- 385

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                              +V   T +C     IL   G I+QA  L++ M   E    V
Sbjct: 386 -------------------EVTFNTFIC-----ILCQKGLIEQAIKLIELM--PEYGCSV 419

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G+               +++ +++     G++D AL LF  +    C  N   Y  L+ G
Sbjct: 420 GI--------------VTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTG 462

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP- 427
           LC++ RL+ + ELL  M +        T N +    C++  V  A+ LV +M   G  P 
Sbjct: 463 LCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 522

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            +  NTLL   + K   + EA   L  +V +G   D + YS+ +  L    R + A+++ 
Sbjct: 523 LITFNTLL-DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  P V  YN I+  LCK     +A D F  M++ G +P+ +TY +LI G    
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641

Query: 548 GNIDQAMLCLSRMLEK 563
           G + +A   LS +  K
Sbjct: 642 GLLKEARYVLSELYAK 657



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 4/292 (1%)

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L E+  L+      G  P  +    + R LCRR     A  ++R     G    V     
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+   C++G+   A R +  M      PD   Y+  I GL D  RV  AL L  D+   G
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P VV Y +++  +CK+    EA ++ +EM  KG  P++ TYN++ING C+ G +D A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L+R L      PD+++YTT++ GLC A R DD  +L+ EM +K C PN +TF  L+  
Sbjct: 232 EILNR-LSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            C+      A+   + M + G  P+  +   +I+A   +     A++ L  M
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/458 (23%), Positives = 200/458 (43%), Gaps = 54/458 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  ARR   ++VL  ++V  +C  +      L+R     G+VE A  +  Q+ + G C P
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTP 314

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N    N ++ A+CK   VD     L  M  YG   D  + T +L+  C +G+++ A  + 
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++      +E  F+  +    + G +++A +LIE M +    +   T+  L+HGF  +
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            RVD AL+LF+ +       +   Y  ++ GLC  ++L+ A +L + M            
Sbjct: 435 GRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGM------------ 479

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                              I +D  +N +T   N ++      G +++A  L+  M+   
Sbjct: 480 -------------------IQKDCPLNAVTF--NVLVSFFCQKGFVEEAMELVNQMM--- 515

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        +   +PN  +F+ +++ + KD   + AL L   +   G   +   Y+
Sbjct: 516 -------------EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYS 562

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +++D L   +R EE+ ++L  +++ G +P     N +   LC+R +   A++    M   
Sbjct: 563 SVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSN 622

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           G  P      +LI+ L   G   EA   L+++  +G L
Sbjct: 623 GCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 2/206 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R+     L   +++  C ++      L+      G VEEA  L +Q+   G C P
Sbjct: 463 LCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG-CTP 521

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  ++N LL+ + K C+ +     L  +   G   D  T + ++ V     + ++A+ + 
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581

Query: 125 NEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + + D G   +  +++ +L A  K  E D+A +    M       NE T+ +LI G   +
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYD 209
             + +A  +  ++   G  S + + D
Sbjct: 642 GLLKEARYVLSELYAKGVLSKSLLED 667


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 168/598 (28%), Positives = 278/598 (46%), Gaps = 29/598 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA ML  ++   GL  PN+ SY  ++ AL KS  V        +M   G   D   
Sbjct: 285 GKLTEAAMLLREMYNMGLD-PNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVL 343

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T ++     +G+  +A  +F  I+    V   V ++ LL    K G+V+ A  ++++M+
Sbjct: 344 CTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKME 403

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             ++  N  TF  +I+G+ KK  ++KA+++  KM +     +  +Y +++ G  +  Q E
Sbjct: 404 KEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHE 463

Query: 223 MALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            A   Y EMK  G+  +   F+IL   +       E   L+K+I   + +       +S+
Sbjct: 464 AAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS-KGIYLDVFNYSSL 522

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG-------------------TV 320
           M      G+   A +++Q M + +   DV V    + KG                    +
Sbjct: 523 MDGYFKEGNESAALSVVQEMTEKDMQFDV-VAYNALTKGLLRLGKYEPKSVFSRMIELGL 581

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  +++ ++NT    GK + AL L  EM   G M N+  YN LI GLC +  +E+   
Sbjct: 582 TPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVIS 641

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKEL 439
           +L EM   G+ PT      + +   R +     L + +K+   G +   + +NTL I  L
Sbjct: 642 VLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTL-ITVL 700

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G   +A   LT+MV +G   DIV Y+A I G      V+ A   +  +   G  P++
Sbjct: 701 CRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNI 760

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN ++ GL     + +A+ L +EM  +GL+P+  TYN+L++G  + GN   ++     
Sbjct: 761 TTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCE 820

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           M+ K    P   TY  LI     AG+   A  L NEM  +G  PN  T+  LI G CK
Sbjct: 821 MITK-GFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 147/661 (22%), Positives = 285/661 (43%), Gaps = 73/661 (11%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +  +L+ ++   G+ VPN +S N L+ +LCK   + L    L+        +D  T
Sbjct: 24  GFVSQVKVLYSEMVLCGV-VPNVFSVNLLVHSLCKVGDLGLALGYLRNSV-----FDHVT 77

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++  +C  G  D+   + +E++  G   D    +IL+  + + G V  A  ++  + 
Sbjct: 78  YNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLV 137

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + L+      L+ G+ +   V +AL L +   K+G   D   Y+ ++   CK   L 
Sbjct: 138 GGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLA 197

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-RDVNTMTLLCNSIMR 281
            A  + +E+ G     D E  S ++  C           E W+  RD+    +   +++ 
Sbjct: 198 KAESVVNEILG--FRRDDE--SGVLNDCG---------VETWDGLRDLQPTVVTWTTLIA 244

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADV-----------------GVEMLM--IFKGTVSP 322
               +  ID  ++L + MI    + DV                    ML+  ++   + P
Sbjct: 245 AYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDP 304

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S+  II+ LLK G++  A +   +M   G   ++ L   ++DGL  + + +E+ E+ 
Sbjct: 305 NHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMF 364

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + + +    P   T  ++    C+  DV  A  +++KM  +   P V   + +I    K 
Sbjct: 365 QTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKK 424

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G   +A   L  MVQ   +P++  Y+  + G     + + A   ++++ + G   + + +
Sbjct: 425 GMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIF 484

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           +I+++ L ++  + EA+ L  ++++KG+   V  Y+ L++G+ K GN   A+  +  M E
Sbjct: 485 DILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTE 544

Query: 563 KESG---------------------------------SPDVITYTTLIDGLCIAGRPDDA 589
           K+                                   +PD +TY ++++   I G+ ++A
Sbjct: 545 KDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENA 604

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + L NEM+  G  PN +T+  LI GLCK       +     M   G  P   +   L+ A
Sbjct: 605 LDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664

Query: 650 F 650
           +
Sbjct: 665 Y 665



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 252/571 (44%), Gaps = 55/571 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFS--KWGEVDKACELIERMDDC 164
           LL  +  SG   +   +++E++  G V  +VFS+ L+  S  K G++  A   +      
Sbjct: 16  LLYEFNASGFVSQVKVLYSEMVLCGVV-PNVFSVNLLVHSLCKVGDLGLALGYLR----- 69

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N   +  T+  ++ GF K+   D+   L  +M K G   D+   ++++ G C+   ++ A
Sbjct: 70  NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYA 129

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMR 281
             +   + G G+  D   L+ L+    + G ++    LV++ W++  V    +  N+++ 
Sbjct: 130 EWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKN-GVKPDIVTYNTLVN 188

Query: 282 ILVSNGSIDQAYNLLQAMI------KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
                G + +A +++  ++      +   + D GVE                        
Sbjct: 189 AFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETW---------------------- 226

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
            DG  DL                V  +  LI   C    +++ + L  +M  SG  P   
Sbjct: 227 -DGLRDL-------------QPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVV 272

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +S+   LCR   +  A  L+R+M   G +P     T +I  L K G+ MEAF   + M
Sbjct: 273 TCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQM 332

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V  G   D+V  +  + GL    +   A E+F+ I      P+ V Y  ++ G CK   V
Sbjct: 333 VVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDV 392

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             AE +  +M  + ++P+V T++ +ING+ K G +++A+  L +M++     P+V  Y  
Sbjct: 393 EFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNI-MPNVFVYAI 451

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+DG    G+ + A   + EM+  G   N I F  L+  L +    + A    + +  KG
Sbjct: 452 LLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKG 511

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  D+F + +L+  +  E N   A  V++EM
Sbjct: 512 IYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/504 (22%), Positives = 211/504 (41%), Gaps = 28/504 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN + Y  LL+   ++   +      KEM+ +G   +      LL     SG   +A S
Sbjct: 443 MPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQS 502

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  +I+  G ++D   +S L+  + K G    A  +++ M + +++ +   +  L  G +
Sbjct: 503 LIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLL 562

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  + +    +F +M + G   D   Y+ ++       + E AL L +EMK  G+ P+  
Sbjct: 563 RLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMV 621

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI      G +  ++  + E   V  +      I + L+   S  +  + +  + K
Sbjct: 622 TYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPI--IHKFLLKAYSRSRKADAILQIHK 679

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
              + D+G+ +          N   ++ +I  L + G    A  +  EM   G   ++  
Sbjct: 680 --KLVDMGLNL----------NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVT 727

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI G C  + +E+++    +M  SG  P   T N++   L     +  A  LV +MR
Sbjct: 728 YNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMR 787

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G  P      +L+    + G   ++ +   +M+ +GF+P    Y+  I       ++ 
Sbjct: 788 ERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMR 847

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLC------------KAQRVAEAEDLFNEMITKG 529
            A EL  ++   G  P+   Y+++I G C            K     EA+ L  EM  KG
Sbjct: 848 QARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKG 907

Query: 530 LIPSVATYNLLINGWCKSGNIDQA 553
            +PS +T   + + +   G  D A
Sbjct: 908 HVPSESTLMYISSNFSAPGKRDDA 931



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 6/121 (4%)

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P +  +N ++     +  V++ + L++EM+  G++P+V + NLL++  CK G++  A+  
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L       +   D +TY T++ G C  G  D    L +EM +KG   + +T   L+ G C
Sbjct: 68  L------RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 121

Query: 617 K 617
           +
Sbjct: 122 Q 122


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 266/616 (43%), Gaps = 91/616 (14%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L+RA   A   +L + +++ R   +    G   R L  +G   +A  L   + R G C
Sbjct: 150 STLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHG-C 208

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+   Y  ++ AL     V    M L EM   G   D  T   L+   C  G+  +A  
Sbjct: 209 VPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAAR 268

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + + ++  G +   V +  LL    +  + D+AC ++ R+ + N+ +       +I G +
Sbjct: 269 LVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVM----LNTVIRGCL 324

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            + ++ +A +L++ M   G   D   Y +++ GLCK  +   A+++  EM+  G  P+  
Sbjct: 325 TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIV 384

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S L+ S    G        +W+D                  +   +DQ          
Sbjct: 385 TYSTLLHSFCRNG--------MWDD------------------ARAMLDQ---------- 408

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                       M+ KG  S N+  ++ II  L KDGKLD A  L +EM   GC  ++  
Sbjct: 409 ------------MLAKG-FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICT 455

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +I  LCN++ +EE+  + R + E G      T N+                      
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNT---------------------- 493

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                        LI  L ++G+  E  R  ++M+  G   D++ Y+  I  L     VD
Sbjct: 494 -------------LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ++ L  ++   G  P+  +YN++I+ LCKA +V +A +L  EM+ +GL P + TYN LI
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           NG CK G    A+  L + L  E+  PD++TY  LI   C     DDA ML ++    G 
Sbjct: 601 NGLCKVGWTHAALNLLEK-LPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 602 APNRITFMALITGLCK 617
            PN  T+  ++    +
Sbjct: 660 VPNERTWGMMVQNFVR 675



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 221/511 (43%), Gaps = 19/511 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++++L   ++      A  L  RM    +     TF V      +  R   AL L   M 
Sbjct: 145 YNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMA 204

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G   DA +Y  +I  L     +  A  L  EM   G   D    + L+      G + 
Sbjct: 205 RHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVR 264

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
              + +  DR      ++    M  +V+ G       LLQ + +    AD    ML    
Sbjct: 265 EAARLV--DR------MMTQGCMPSVVTYGF------LLQGLCRTRQ-ADEACAMLGRLP 309

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                N    + +I   L +GKL  A  L+  M   GC  +V  Y+ L+ GLC   R   
Sbjct: 310 EV---NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +  +L EMEE G  P   T +++    CR      A  ++ +M  +G     +    +I 
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK GK  +A R + +M  +G  PDI  Y+  I  L +   ++ A  +FR++   G   
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVA 486

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           + + YN +I  L +  R  E   L +EM+  G    V +YN LI   CK GN+D++M  L
Sbjct: 487 NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALL 546

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M+ K    P+  +Y  LI+ LC AG+  DA+ L  EM  +G  P+ +T+  LI GLCK
Sbjct: 547 EEMVTK-GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
                AAL     +  + + PD+  +  LIS
Sbjct: 606 VGWTHAALNLLEKLPNENVHPDIVTYNILIS 636



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 176/364 (48%), Gaps = 10/364 (2%)

Query: 291 QAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++YN+ L  + + +  AD  +    + +  V P T +F +    L + G+   AL+L R 
Sbjct: 143 RSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRG 202

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC+ +  LY  +I  L     + E+  LL EM   G      T N +   LC    
Sbjct: 203 MARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI--VCY 467
           V  A  LV +M  QG  P V     L++ LC+  +A EA   L      G LP++  V  
Sbjct: 263 VREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML------GRLPEVNVVML 316

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G +   ++  A EL+  + + GC PDV  Y+I++ GLCK  R   A  + +EM  
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG  P++ TY+ L++ +C++G  D A   L +ML K   S +   Y  +I  LC  G+ D
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAK-GFSMNSQGYNGIIYALCKDGKLD 435

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  L  EM+ +GC P+  T+  +I  LC  D    A   FR + E+G+  +   +  LI
Sbjct: 436 QATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLI 495

Query: 648 SAFL 651
            A L
Sbjct: 496 HALL 499



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 6/275 (2%)

Query: 377 ESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +  LL +M       P+  + N +   L R      AL L R+M      P      + 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
            + LC+ G+A +A   L  M + G +PD V Y   I  L+    V  A  L  ++   GC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             DV  +N ++ GLC   RV EA  L + M+T+G +PSV TY  L+ G C++   D+A  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L R+ E      +V+   T+I G    G+   A  L+  M  KGC P+  T+  L+ GL
Sbjct: 304 MLGRLPEV-----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           CK  R  +A+     M+EKG  P++  +  L+ +F
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSF 393



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 203/440 (46%), Gaps = 35/440 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +G V EA  L D++  +G C+P+  +Y  LL+ LC++   D     L  + + 
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQG-CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV 311

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               +   L  +++     G+  +A  ++  +   G   D H +SIL+    K G    A
Sbjct: 312 ----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M++     N  T+  L+H F +    D A  + D+M   GF+ ++  Y+ II  
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYA 427

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDV-N 270
           LCK+ +L+ A +L  EMK  G  PD    + +I   C+++   E   + + + E+  V N
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487

Query: 271 TMTLLCNSIMRILVSNGSIDQ------------------AYN-LLQAMIKGEPIADVGVE 311
            +T   N+++  L+ NG   +                  +YN L++A+ K E   D  + 
Sbjct: 488 GITY--NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCK-EGNVDRSMA 544

Query: 312 ML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           +L  M+ KG + PN  S++++IN L K GK+  AL L +EM   G   ++  YN LI+GL
Sbjct: 545 LLEEMVTKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C       +  LL ++      P   T N +    C+ + +  A  L+ K    G  P  
Sbjct: 604 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNE 663

Query: 430 KHNTLLIKELCKHGKAMEAF 449
           +   ++++   +    +E +
Sbjct: 664 RTWGMMVQNFVRQTVNLEGY 683


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 263/584 (45%), Gaps = 27/584 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    S  ++E A  +F   K  GL  P+  + N LL+ L ++  V+ V    +E++D 
Sbjct: 253 LISVFASNSMLENALDVFSNAKHVGL-EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDR 311

Query: 96  GWGYDKYTLTPLLQVYCNSGQFD----KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           G   + YT T ++  YC+    D    +A  +  +I   G     V +S  +    K G 
Sbjct: 312 GPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGN 371

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V+ A  LI  +   N  LN  +F  +I+GF K+  V +ALQ+ ++M  SG   D   Y +
Sbjct: 372 VEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSI 431

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I   C    +   L L  EM+ S I P     + LI     +  L   V +I+     +
Sbjct: 432 LINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAV-DIFHSIGAS 490

Query: 271 TM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +    + +  +++      G +D A  LL+ MI  E +                P   S 
Sbjct: 491 SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELV----------------PTAFSC 534

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I    K G  D AL +F  M + G   +    N ++DG C +   +E+  LL + +E
Sbjct: 535 RSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQE 594

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            GF     + N++   LC+      AL L+ +M  +   P V + + LI    K      
Sbjct: 595 HGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKR 654

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A    T MV+ G   +I  Y+  +       ++  A  +F+++   G C D ++Y  +I 
Sbjct: 655 AVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIV 714

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C  + + +A  LF EM  +G  P+V TY  +I+G+CKS  ID A     +M  ++S  
Sbjct: 715 GFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM-NRDSVI 773

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           PDV+TYT LID     G  D A  L++ M++KG  P+ IT   L
Sbjct: 774 PDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 243/550 (44%), Gaps = 27/550 (4%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR-----L 89
           FL++CL     VE    +F+++K  G   PN Y+Y  ++   C     D   MR     L
Sbjct: 287 FLLKCLVEANRVEFVRRVFEELKDRGPS-PNIYTYTIMMNFYCSDVGCD-AGMRQAAVIL 344

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKW 148
            ++   G      T +  +   C  G  + AL +   +   +  ++ H F+ ++  F K 
Sbjct: 345 GKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKR 404

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GEV +A +++E M    I  +  ++ +LI+ F  K  V K L L ++M  S        Y
Sbjct: 405 GEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSY 464

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-- 266
             +I GLCK   L+ A+ ++  +  S    D  +   LI     +G++   +K + E   
Sbjct: 465 TSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMIC 524

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            ++      C S++R     G  DQA  +  AM+                +  + P+T +
Sbjct: 525 NELVPTAFSCRSLIRGYYKLGLFDQALEVFNAML----------------RDGIWPDTIA 568

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            + I++   + G    AL+L  +  + G   N   YN +I  LC     E + ELL  M 
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRML 628

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           +    P+    +++     ++ +   A+NL  +M   G    +   T+L+       K  
Sbjct: 629 KRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMH 688

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA+    +M + G   D + Y+  I G  + + +  A  LF ++   GC P+V+ Y  II
Sbjct: 689 EAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G CK+ R+  A  +F++M    +IP V TY +LI+ + K G  DQA   L  +++ +  
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHK-LYDVMKDKGV 807

Query: 567 SPDVITYTTL 576
            PD IT+  L
Sbjct: 808 LPDDITHNVL 817



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 234/553 (42%), Gaps = 66/553 (11%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKS--GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           I GF  +++ D   +LF     S         ++DV+I     N  LE AL ++S  K  
Sbjct: 218 IVGFCNEAKYD-TFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWE---DR----DVNTMTLLCNSIMRILVSNG 287
           G+ PD    + L+  C  E      V+ ++E   DR    ++ T T++ N     +  + 
Sbjct: 277 GLEPDIRTCNFLL-KCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDA 335

Query: 288 SIDQAYNLLQAMIK-GEP---------------IADVGVEMLMI--FKGTVSP-NTSSFD 328
            + QA  +L  + + GE                + +V   +++I     T  P N+ SF+
Sbjct: 336 GMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFN 395

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I    K G++  AL +  EM   G + +V+ Y+ LI+  C    + +  +L+ EME S
Sbjct: 396 DVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHS 455

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             KP+  +  S+   LC++  +  A+++   +     +        LI   C  G    A
Sbjct: 456 QIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSA 515

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            + L +M+    +P      + I G   +   D ALE+F  +   G  PD +A N I+ G
Sbjct: 516 IKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDG 575

Query: 509 LCKAQRVAEA--------EDLFN---------------------------EMITKGLIPS 533
            C+A    EA        E  FN                            M+ + ++PS
Sbjct: 576 SCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPS 635

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  Y+ LI+G+ K  N  +A+   +RM+ K   + ++ TYT L+     + +  +A  ++
Sbjct: 636 VVNYSTLISGFAKQSNFKRAVNLFTRMV-KVGITFNIATYTILMSIFSHSHKMHEAYGIF 694

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM+E+G   ++I++  LI G C     + A   F  M  +G  P++  +  +I  F   
Sbjct: 695 KEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKS 754

Query: 654 LNPPLAFEVLKEM 666
               LA  V  +M
Sbjct: 755 NRIDLATWVFDKM 767


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 295/637 (46%), Gaps = 37/637 (5%)

Query: 49  ANMLFDQVKREG---LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           A  LF++V R     +  P  ++Y  L++   ++    L      ++   G G D   ++
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFS-----KWGEVDKACELIER 160
            LL+  C + +  +AL +    + H      VFS  +V  S     K G+ D   EL+  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD---ELLRM 204

Query: 161 MDDCNIRL--NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           M +       N   +  +I GF K+  V+KA  LF++M + G + D + Y+ ++  LCK 
Sbjct: 205 MAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKA 264

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLC 276
           + ++ A  +  +M   G+ PD    + LI   S  G+    + V +    + +    +  
Sbjct: 265 RAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 277 NSIMRILVSNGSIDQAYNLLQAM-IKGEP------------------IADVGVEMLMIFK 317
           NS+M  L  +G I  A ++  +M +KG+                   + D+     ++  
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             ++P++  F+++I    K G LD A  +F EM + G   +V  Y+ +I  LC   ++++
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + E   +M + G  P+  T + + +  C   D++ A +LV +M  +G  P +     +I 
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK G+ M+A       +  G  P+++ Y+  + G   + +++ AL +F  + + G  P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +VV Y  +++G CK  R+ E   LF E++ KG+ PS   YN++++G  ++G    A +  
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624

Query: 558 SRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             M   ESG + D  TY+ ++ GL      D+AI+L+ E+       +  T   +I G+ 
Sbjct: 625 HEM--TESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMF 682

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +  R   A   F  +   G+ P +  +  +++  + E
Sbjct: 683 QIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 274/544 (50%), Gaps = 24/544 (4%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           LR++A+    + C  +  A   +I      G V +A  LF+++ + G+  P+  +YNC++
Sbjct: 202 LRMMAEG--GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGIS-PDLSTYNCVV 258

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
            ALCK+ ++D  E  L++M D G   D +T   L+  Y ++GQ+ +A+ V  ++   G +
Sbjct: 259 NALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGIL 318

Query: 134 DEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            + V  + L+ +  K G++  A ++ + M     + +  ++ ++++G+  K  +    +L
Sbjct: 319 PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTEL 378

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F+ M   G A D+ +++V+I    K   L+ A  +++EM+  G+ PD    S +I +   
Sbjct: 379 FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438

Query: 253 EGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEPIADVG 309
            G++   V++  +  D+ V       + +++   ++G + +A +L LQ M KG       
Sbjct: 439 IGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG------- 491

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                     + P+   F+ IIN L K G++  A ++F     IG   NV +YN L+DG 
Sbjct: 492 ----------MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGY 541

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C   ++E +  +   M  +G +P      ++    C+   +   L+L R++  +G +P  
Sbjct: 542 CLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPST 601

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
               +++  L + G+ + A     +M + G   D   YS  +GGL      D A+ LF++
Sbjct: 602 TLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKE 661

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + A     D+   NI+I+G+ + +RV EA+DLF  +   GL+PSV TY++++    K G 
Sbjct: 662 LHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGL 721

Query: 550 IDQA 553
           +++A
Sbjct: 722 VEEA 725



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 237/549 (43%), Gaps = 61/549 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    S G  +EA  +  ++  +G+ +P+  + N L+ +LCK   +         M   
Sbjct: 292 LIYGYSSTGQWKEAVRVSKKMTSQGI-LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMK 350

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D ++   +L  Y   G       +FN ++  G   D H+F++L+ A++K G +D+A
Sbjct: 351 GQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA 410

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +   M +  +  +  T+  +I    +  ++D A++ F++M   G A   + Y  +I G
Sbjct: 411 TIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQG 470

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C +  L  A  L  +M   G+ PD    + +I +    G        + + +++   T+
Sbjct: 471 FCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGR-------VMDAQNIFDFTI 523

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                  ++V N  +D  Y L+  M     + DV     M+  G + PN   +  ++N  
Sbjct: 524 SIGLHPNVMVYNTLMD-GYCLVGKMENALRVFDV-----MVSAG-IQPNVVVYGTLVNGY 576

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D  LSLFRE+   G   +  LYN ++ GL  + R   +     EM ESG     
Sbjct: 577 CKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDR 636

Query: 395 FT----LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +T    L  +F+  C  + +                       LL KEL  H   ++   
Sbjct: 637 YTYSIVLGGLFKNSCSDEAI-----------------------LLFKEL--HAMNVKI-- 669

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
                       DI   +  I G+  I+RV+ A +LF  I   G  P VV Y+I+++ L 
Sbjct: 670 ------------DITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717

Query: 511 KAQRVAEAEDLFNEMITKGL-IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           K   V EA+D+F+ M   G   P+    N ++    +   I +A   LS++ E+ S S D
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDER-SFSLD 776

Query: 570 VITYTTLID 578
             T T LID
Sbjct: 777 HSTTTLLID 785



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 19/239 (7%)

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI-----DIKRVDLALELFRDICAHG 494
           C+ G A+    F  + V     P ++  +    G++        R  L L  F  +   G
Sbjct: 81  CRDGPALAVALF--NRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTG 138

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAED-LFNEMITKGLIPSVATYNLLINGWC---KSGNI 550
              D +  + ++ GLC+A+R AEA D L + M   G +P V +Y +++   C   KSG  
Sbjct: 139 LGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQA 198

Query: 551 DQAMLCLSRMLEKESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           D+    L RM+  E G+   P+ + Y T+IDG    G  + A  L+NEM ++G +P+  T
Sbjct: 199 DE----LLRMMA-EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLST 253

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  ++  LCK      A    R M +KG+ PD + + +LI  + S      A  V K+M
Sbjct: 254 YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 216/477 (45%), Gaps = 53/477 (11%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LIHG      +DKA+Q+   +   G   D   Y+ II G C+  +++ A Q+   MK  G
Sbjct: 98  LIHGLFTSKTIDKAIQVMHILENHGHP-DLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD    + LI S                                 L S G +D A   
Sbjct: 157 FSPDIVTYNILIGS---------------------------------LCSRGMLDSALEF 183

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              ++K                    P   ++ I+I   L  G +D A+ L  EM +I  
Sbjct: 184 KNQLLKEN----------------CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINL 227

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN++I G+C    ++ +++++  +   G+ P   T N + R L  +        
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+  M  +G E  V   ++LI  +C+ GK  E    L DM ++G  PD  CY   I  L 
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              RVDLA+E+   + + GC PD+V YN I++ LCK +R  EA  +F ++   G  P+ +
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW-- 593
           +YN + +    +G+  +A+  +  ML+K    PD ITY +LI  LC  G  D+AI L   
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVD 466

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            EME   C P+ +++  ++ GLCK  R   A+     M +KG +P+   +  LI   
Sbjct: 467 MEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 260/563 (46%), Gaps = 24/563 (4%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N++S +  L  L ++ +++     + + Q +   +    L   L   C +G F+++L   
Sbjct: 21  NSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFL 80

Query: 125 NEIIDHGWVDEHVFSILLV-AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +++ G   + V    L+        +DKA +++  +++ +   +   +  +I GF + 
Sbjct: 81  RHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILEN-HGHPDLIAYNAIITGFCRA 139

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           +R+D A Q+ D+M   GF+ D   Y+++IG LC    L+ AL+  +++      P     
Sbjct: 140 NRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTY 199

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + LI +   +G +   +K + E  ++N        NSI+R +   G +D+A+ ++ +   
Sbjct: 200 TILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISS--- 256

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                        I     +P+  +++I++  LL  GK +    L  +M   GC  NV  
Sbjct: 257 -------------ISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ LI  +C   ++EE   LL++M++ G KP  +  + +   LC+   V  A+ ++  M 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P + +   ++  LCK  +A EA      + + G  P+   Y++    L       
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF--NEMITKGLIPSVATYNL 539
            AL +  ++   G  PD + YN +IS LC+   V EA +L    EM +    PSV +YN+
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           ++ G CK   +  A+  L+ M++K    P+  TYT LI+G+   G  +DA  L   +   
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDK-GCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542

Query: 600 GCAPNRITFMALITGLCKCDRPR 622
             A +  +F  L    CK D  R
Sbjct: 543 D-AISEHSFERLYKTFCKLDVYR 564



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 224/487 (45%), Gaps = 55/487 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +YN ++   C++  +D     L  M++ G+  D  T   L+   C+ G  D AL  
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            N+++        V ++IL+ A    G +D+A +L++ M + N++ +  T+  +I G  +
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  VD+A Q+   ++  G+A D   Y++++ GL    + E   +L S+M   G       
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGC------ 297

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                  + +V T ++L +S+ R    +G +++   LL+ M K 
Sbjct: 298 -----------------------EANVVTYSVLISSVCR----DGKVEEGVGLLKDMKK- 329

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG + P+   +D +I  L K+G++DLA+ +   M   GC+ ++  Y
Sbjct: 330 --------------KG-LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N ++  LC   R +E+  +  ++ E G  P   + NSMF  L      V AL ++ +M  
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD 434

Query: 423 QGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF--LPDIVCYSAAIGGLIDIKR 479
           +G +P  + +N+ LI  LC+ G   EA   L DM  E     P +V Y+  + GL  + R
Sbjct: 435 KGVDPDGITYNS-LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V  A+E+   +   GC P+   Y  +I G+     + +A DL   ++    I S  ++  
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI-SEHSFER 552

Query: 540 LINGWCK 546
           L   +CK
Sbjct: 553 LYKTFCK 559



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 191/393 (48%), Gaps = 18/393 (4%)

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +LC  ++  L ++ +ID+A                 ++++ I +    P+  +++ II  
Sbjct: 93  VLCTKLIHGLFTSKTIDKA-----------------IQVMHILENHGHPDLIAYNAIITG 135

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             +  ++D A  +   M   G   ++  YN LI  LC+   L+ + E   ++ +   KPT
Sbjct: 136 FCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPT 195

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T   +      +  +  A+ L+ +M     +P +     +I+ +C+ G    AF+ ++
Sbjct: 196 VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIIS 255

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +  +G+ PD++ Y+  + GL++  + +   EL  D+ A GC  +VV Y+++IS +C+  
Sbjct: 256 SISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDG 315

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +V E   L  +M  KGL P    Y+ LI   CK G +D A+  L  M+  +   PD++ Y
Sbjct: 316 KVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS-DGCVPDIVNY 374

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            T++  LC   R D+A+ ++ ++ E GC+PN  ++ ++ + L        AL     M +
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD 434

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           KG+ PD   + +LIS    +     A E+L +M
Sbjct: 435 KGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 144/297 (48%), Gaps = 2/297 (0%)

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C +    ES   LR +   G KP       +   L   + +  A+ ++  +   GH   +
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLI 127

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +N + I   C+  +   A++ L  M  +GF PDIV Y+  IG L     +D ALE    
Sbjct: 128 AYNAI-ITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +    C P VV Y I+I        + EA  L +EM+   L P + TYN +I G C+ G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +D+A   +S +  K   +PDVITY  L+ GL   G+ +    L ++M  +GC  N +T+ 
Sbjct: 247 VDRAFQIISSISSK-GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYS 305

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI+ +C+  +    +   + MK+KG+KPD + +  LI+A   E    LA EVL  M
Sbjct: 306 VLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 193/457 (42%), Gaps = 59/457 (12%)

Query: 7   RARRI-APLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCV 63
           RA RI +  +VL  D +K++ F SP  + +  LI  L S G+++ A    +Q+ +E  C 
Sbjct: 138 RANRIDSAYQVL--DRMKNKGF-SPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN-CK 193

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +Y  L+EA      +D     L EM +     D +T   +++  C  G  D+A  +
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + I   G+  D   ++ILL      G+ +   EL+  M       N  T+ VLI    +
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V++ + L   M K G   D   YD +I  LCK  ++++A+++   M   G  PD   
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI-- 371

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                     VN      N+I+  L      D+A ++       
Sbjct: 372 --------------------------VNY-----NTILACLCKQKRADEALSIF------ 394

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           E + +VG           SPN SS++ + + L   G    AL +  EM   G   +   Y
Sbjct: 395 EKLGEVG----------CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITY 444

Query: 363 NNLIDGLCNSNRLEESYELL--REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           N+LI  LC    ++E+ ELL   EME S  KP+  + N +   LC+   V  A+ ++  M
Sbjct: 445 NSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAM 504

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             +G  P     T LI+ +   G   +A    T +V 
Sbjct: 505 VDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVN 541



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 2/161 (1%)

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           +S  CKA    E+      ++ KG  P V     LI+G   S  ID+A+  +  +LE   
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENH- 121

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
           G PD+I Y  +I G C A R D A  + + M+ KG +P+ +T+  LI  LC      +AL
Sbjct: 122 GHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSAL 181

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                + ++  KP +  +  LI A L +     A ++L EM
Sbjct: 182 EFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEM 222



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQ 93
           LI CL   G+V+EA  +L D       C P+  SYN +L  LCK   V D +E+ L  M 
Sbjct: 447 LISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEV-LAAMV 505

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK 147
           D G   ++ T T L++     G  + A  +   +++   + EH F  L   F K
Sbjct: 506 DKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFCK 559


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 224/498 (44%), Gaps = 54/498 (10%)

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA E+   M +  IR    T+  ++H F K   V +AL L  KM + G       ++V+I
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVN 270
            GL K  +L+ A  L  EM  +G+       + LI     +G   LLV+ +  WE+    
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKG---LLVEALALWEE---- 332

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                                                      M+ +G VSP  +S + I
Sbjct: 333 -------------------------------------------MVTRG-VSPTVASHNTI 348

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +    K+GK+  A     +M +   M ++  YN LI G C    + E++ LL E+     
Sbjct: 349 MYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                T N++   LCR  D+  AL L   M  +G  P V   T+L+   CK G  + A  
Sbjct: 409 SFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKE 468

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  +M+  G  PD   Y+A I G + +     A +L  ++   G  PDV+ YN+ ++GLC
Sbjct: 469 FFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC 528

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   + EA +L  +MI  G +P   TY   ++   ++G++ +       ML +   +P V
Sbjct: 529 KLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSR-GQTPTV 587

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TYT LI    + GR D A+  + EM+EKG  PN IT+  LI G CK  +   A   F  
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 631 MKEKGMKPDMFVFVALIS 648
           M+EKG+ P+ + +  LI+
Sbjct: 648 MQEKGIFPNKYTYTILIN 665



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 239/502 (47%), Gaps = 20/502 (3%)

Query: 119 KALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KAL V+  + ++G       ++ +L +F K GEV +A +L+ +M +     +E TF VLI
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +G  KK  + +A  L  +M K+G       Y+ +I G CK   L  AL L+ EM   G++
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNL 295
           P     + ++     EG+++   +++ +    N M   +  N+++      G+I +A+ L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L                 + F+  +S N  +++ +I+ L + G L+ AL L  +M   G 
Sbjct: 400 LDE---------------LRFR-NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGI 443

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  L++G C    +  + E   EM   G  P  F   +      +  D   A  
Sbjct: 444 HPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFK 503

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  +M  +G  P V    + +  LCK G   EA   L  M+++G +PD V Y++ +   +
Sbjct: 504 LQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHM 563

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           +   +    E+F D+ + G  P VV Y ++I       R+  A   F EM  KG++P+V 
Sbjct: 564 ENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVI 623

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN+LING+CK   +DQA      M EK    P+  TYT LI+  C  G+  +A+ L+ +
Sbjct: 624 TYNVLINGFCKVRKMDQACKFFIEMQEK-GIFPNKYTYTILINENCNMGKWQEALRLYAQ 682

Query: 596 MEEKGCAPNRITFMALITGLCK 617
           M  K   P+  T  AL+  L K
Sbjct: 683 MLGKRIRPDSCTHGALLKKLDK 704



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 233/493 (47%), Gaps = 22/493 (4%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M +YG      T   +L  +C  G+  +AL +  ++ + G +  E  F++L+   SK GE
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + +A  LI+ M    +R++  T+  LI G+ KK  + +AL L+++M   G +   A ++ 
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDR 267
           I+ G CK  ++  A Q  S+M    + PD    + LI       + GE  +L+ E+   R
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL-RFR 406

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +++   +  N+++  L   G ++ A  L + MI                +G + P+  ++
Sbjct: 407 NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN---------------RG-IHPDVVTY 450

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            +++N   K G + +A   F EM  +G   + F Y   I G        ++++L  EM  
Sbjct: 451 TVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLT 510

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            GF P   T N     LC+  ++  A  L++KM   GH P     T  +    ++G   E
Sbjct: 511 KGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLRE 570

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
                 DM+  G  P +V Y+  I       R+D A+  F ++   G  P+V+ YN++I+
Sbjct: 571 GREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G CK +++ +A   F EM  KG+ P+  TY +LIN  C  G   +A+   ++ML K    
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRI-R 689

Query: 568 PDVITYTTLIDGL 580
           PD  T+  L+  L
Sbjct: 690 PDSCTHGALLKKL 702



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 181/376 (48%), Gaps = 17/376 (4%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN I++IL     + +A  + + M       + G+           P  ++++ ++++  
Sbjct: 205 CNRILKILRDKNLLVKALEVYRMM------GEYGIR----------PTVTTYNTMLHSFC 248

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K G++  AL L  +M + GC  +   +N LI+GL     L+++  L++EM ++G + + +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +    C++  +V AL L  +M  +G  P V  +  ++   CK GK  +A + L+DM
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +++  +PDI+ Y+  I G   +  +  A  L  ++       ++V YN +I GLC+   +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A  L  +MI +G+ P V TY +L+NG CK GN+  A      ML     +PD   YT 
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHV-GLAPDQFAYTA 487

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            I G    G    A  L  EM  KG  P+ IT+   + GLCK      A    + M   G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547

Query: 636 MKPDMFVFVALISAFL 651
             PD   + + + A +
Sbjct: 548 HVPDHVTYTSFMHAHM 563



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 217/463 (46%), Gaps = 27/463 (5%)

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL-LVKEIW 264
           A Y  +I    + K      Q +   K + +  D ++L +++ S  ++  + L   K + 
Sbjct: 71  APYKDLIFNTIQEKPWAFCNQNWVSDKFNSVITDPQLLIRVLYSIREKPTIALRFFKCVL 130

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                 T      +I++ILV N  +  AY +++ +I  E    V                
Sbjct: 131 TQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIV---------------- 174

Query: 325 SSFDIIINTLLKDGKLDLA-LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              D++I      G L+   L +F +M +   + +V   N ++  L + N L ++ E+ R
Sbjct: 175 ---DVLIG-----GYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYR 226

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M E G +PT  T N+M    C+  +V  AL+LV KM+ +G  P      +LI  L K G
Sbjct: 227 MMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKG 286

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A   + +M + G       Y+  I G      +  AL L+ ++   G  P V ++N
Sbjct: 287 ELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHN 346

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            I+ G CK  ++++A    ++M+ K L+P + +YN LI G+C+ GNI +A + L   L  
Sbjct: 347 TIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDE-LRF 405

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            + S +++TY TLIDGLC  G  + A+ L  +M  +G  P+ +T+  L+ G CK      
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F  M   G+ PD F + A I   L   +   AF++ +EM
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 222/522 (42%), Gaps = 55/522 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+ A  L  +++  G C P+  ++N L+  L K   +   +  ++EM   G     YT
Sbjct: 251 GEVQRALDLVPKMQERG-CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACELIER 160
             PL+  YC  G   +AL+++ E++  G    V  H  + ++  F K G++  A + +  
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH--NTIMYGFCKEGKMSDARQQLSD 367

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M   N+  +  ++  LI+GF +   + +A  L D++     + +   Y+ +I GLC+   
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGD 427

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           LE AL+L  +M   GI PD    + L+      G + L+ KE ++               
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNM-LMAKEFFD--------------- 471

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                                         EML +    ++P+  ++   I   LK G  
Sbjct: 472 ------------------------------EMLHV---GLAPDQFAYTARIVGELKLGDT 498

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  L  EM   G   +V  YN  ++GLC    LEE+ ELL++M   G  P H T  S 
Sbjct: 499 AKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSF 558

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                    +     +   M  +G  P V   T+LI     +G+   A  +  +M ++G 
Sbjct: 559 MHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGV 618

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P+++ Y+  I G   ++++D A + F ++   G  P+   Y I+I+  C   +  EA  
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALR 678

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           L+ +M+ K + P   T+  L+    K   +       S +L+
Sbjct: 679 LYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILD 720



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 210/481 (43%), Gaps = 67/481 (13%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS+   +   + L Q++ K+   +SP     LI      GL+ EA  L++++   G+  P
Sbjct: 282 LSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS-P 340

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              S+N ++   CK   +     +L +M        K  L P                  
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDML-------KKNLMP------------------ 375

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
            +II         ++ L+  F + G + +A  L++ +   N+  N  T+  LI G  +  
Sbjct: 376 -DIIS--------YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-FEIL 243
            ++ AL+L + M   G   D   Y V++ G CK   + MA + + EM   G+ PD F   
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYT 486

Query: 244 SKLIT--SCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           ++++      D  +   L +E+       DV T  +  N + ++    G++++A  LLQ 
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL----GNLEEAGELLQK 542

Query: 299 MIKGEPIADV------------------GVEML--MIFKGTVSPNTSSFDIIINTLLKDG 338
           MI+   + D                   G E+   M+ +G  +P   ++ ++I+    +G
Sbjct: 543 MIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQ-TPTVVTYTVLIHAHALNG 601

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +LD A++ F EM + G + NV  YN LI+G C   +++++ +   EM+E G  P  +T  
Sbjct: 602 RLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYT 661

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C       AL L  +M  +   P    +  L+K+L K  K ++A +F+  ++ +
Sbjct: 662 ILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK-VQAVQFIESLILD 720

Query: 459 G 459
           G
Sbjct: 721 G 721


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 168/625 (26%), Positives = 280/625 (44%), Gaps = 79/625 (12%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
            A   L+    S G  +EA   F ++  +  C P  + YN + + L     + L      
Sbjct: 145 AAFRALVLAHSSAGRHQEAVEAFSRMG-DFDCRPTAFVYNAVFQVLVDRGVILLALALYN 203

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
            M   G   +  T   L+   C  G    AL +F+E+++ G V D  ++++LL +    G
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEG 263

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            ++ A  L+  M +     +E T+ V + G  K  RVD+A   F+ +   GF      Y 
Sbjct: 264 RIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYS 323

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED 266
            +I GL +  + +  L  Y+EM G  I+PD  + + LI   ++ G      LL+ E+ +D
Sbjct: 324 CLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM-KD 382

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           +     T   N++++ L   G+ID+A +L+  M++   + D                +++
Sbjct: 383 KGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLD----------------STT 426

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +I+I  L K G +D A+ +F EM + GC   V  YN LIDGL  +  LEE+  L  +ME
Sbjct: 427 HNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME 486

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P      S+F  L    + V     +RK               L+  +C+ G+ +
Sbjct: 487 -MGNNP------SLFLRLTLGANQVRDTESLRK---------------LVDGMCQSGQVL 524

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A++ L  +++ G +PD+V Y+  I GL   K +D AL LF+++   G  PD + Y  +I
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEKES 565
            GL +A R  +A  LF  ++  G  PS+  YN ++   C+   + QA+ L L  + +K +
Sbjct: 585 DGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYN 644

Query: 566 GSPD--VIT--------------------------------YTTLIDGLCIAGRPDDAIM 591
            SP+  VI                                 YT  + GLC   + DDA+ 
Sbjct: 645 LSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALR 704

Query: 592 LWNEMEEKGCAPNRITFMALITGLC 616
           +++ +EE G          LI  LC
Sbjct: 705 IFHILEEFGIVVTPACCALLINYLC 729



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 206/471 (43%), Gaps = 65/471 (13%)

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSN 286
           ++ + +G+         L+ + S  G     V+      D D      + N++ ++LV  
Sbjct: 133 ADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDR 192

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I  A  L   M+    +                PN++++ ++++ L K G    AL +
Sbjct: 193 GVILLALALYNRMVSSGCL----------------PNSTTYIVLMDGLCKRGMAVDALKM 236

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM + G + +V +Y  L+  LCN  R+E++  LL  M+E+G  P   T       LC+
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 407 R-------------QD------VVG----------------ALNLVRKMRVQGHEPWVKH 431
                         QD      ++G                 L+   +M  +   P +  
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T+LI+   + G+  +AF  L +M  +GF+PD  CY+  +  L D+  +D A  L  ++ 
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +    D   +NI+I GLCK   + +A  +F+EM   G  P+V TYN LI+G  ++G ++
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 552 QAMLCLSRMLEKESGS------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +A +   +M    + S             D  +   L+DG+C +G+   A  L   + E 
Sbjct: 477 EARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIES 536

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G  P+ +T+  LI GLCK      AL  F+ ++ KG+ PD   +  LI   
Sbjct: 537 GVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGL 587



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 154/606 (25%), Positives = 254/606 (41%), Gaps = 118/606 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L + G +E+A  L   +K  G C P+  +Y   L  LCK+  VD    R + +QD 
Sbjct: 255 LLSSLCNEGRIEDAGRLLCSMKENG-CPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDG 313

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--------------------------- 128
           G+       + L+     +G+FD+ LS + E++                           
Sbjct: 314 GFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDA 373

Query: 129 --------DHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                   D G+V D   ++ LL A    G +D+A  L+  M   N+ L+  T  ++I G
Sbjct: 374 FLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICG 433

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             KK  +DKA+Q+FD+M + G       Y+ +I GL +   LE A  L+ +M+  G  P 
Sbjct: 434 LCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME-MGNNPS 492

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             +             LTL   ++   RD  ++  L +     +  +G + +AY LL+ +
Sbjct: 493 LFL------------RLTLGANQV---RDTESLRKLVDG----MCQSGQVLKAYKLLRGI 533

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I                +  V P+  +++ +IN L K   LD AL LF+E+   G   + 
Sbjct: 534 I----------------ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDE 577

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LIDGL  ++R  ++  L + +  SG  P+    N+M R LCR + +  A+NL   
Sbjct: 578 ITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINL--- 634

Query: 420 MRVQGHEPWV-----KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                   W+     K+N     E+  + +      FL + V+E               L
Sbjct: 635 --------WLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKE---------------L 671

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           I I +V  +L            P+   Y I + GLC+ +++ +A  +F+ +   G++ + 
Sbjct: 672 IKIDQVYGSLN-----------PN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTP 718

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
           A   LLIN  C   N++ A+  +   L K       +    L+  LCI  R  DA  L  
Sbjct: 719 ACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVG-NRLLRSLCIRYRRHDAQALSW 777

Query: 595 EMEEKG 600
            M   G
Sbjct: 778 RMHLVG 783



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 6/227 (2%)

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +H +A+EAF  + D       P    Y+A    L+D   + LAL L+  + + GC P+  
Sbjct: 159 RHQEAVEAFSRMGDFDCR---PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNST 215

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y +++ GLCK     +A  +F+EM+ +G++P V  Y +L++  C  G I+ A   L  M
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275

Query: 561 LEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
             KE+G  PD +TYT  + GLC AGR D+A   +  +++ G     I +  LI GL +  
Sbjct: 276 --KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAG 333

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R    L ++  M  K + PD+ ++  LI  F        AF +L EM
Sbjct: 334 RFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 36/305 (11%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +  L+    ++ R +E+ E    M +   +PT F  N++F+ L  R  ++ AL L  +M 
Sbjct: 147 FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMV 206

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P      +L+  LCK G A++                                  
Sbjct: 207 SSGCLPNSTTYIVLMDGLCKRGMAVD---------------------------------- 232

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL++F ++   G  PDV  Y +++S LC   R+ +A  L   M   G  P   TY + +
Sbjct: 233 -ALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFL 291

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G CK+G +D+A      +L+    +  +I Y+ LIDGL  AGR D+ +  + EM  K  
Sbjct: 292 SGLCKAGRVDEAFHRFE-LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSI 350

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           +P+   +  LI    +  R + A +    MK+KG  PD F +  L+ A     N   A  
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQS 410

Query: 662 VLKEM 666
           ++ EM
Sbjct: 411 LMSEM 415



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 1/213 (0%)

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L     A+  F  L D    G       + A +       R   A+E F  +    C P 
Sbjct: 119 LASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPT 178

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              YN +   L     +  A  L+N M++ G +P+  TY +L++G CK G    A+    
Sbjct: 179 AFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFD 238

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            MLE+    PDV  YT L+  LC  GR +DA  L   M+E GC P+ +T+   ++GLCK 
Sbjct: 239 EMLER-GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA 297

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            R   A   F ++++ G    +  +  LI    
Sbjct: 298 GRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLF 330



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 164/399 (41%), Gaps = 67/399 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ---------- 93
           GL+++A  +FD++   G C P   +YN L++ L ++  ++   M   +M+          
Sbjct: 438 GLIDKAMQVFDEMGEHG-CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLR 496

Query: 94  ---DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
                    D  +L  L+   C SGQ  KA  +   II+ G V + V ++ L+    K  
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +D A  L + +    I  +E T+  LI G  +  R + A  LF  + +SG      +Y+
Sbjct: 557 NLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYN 616

Query: 210 VIIGGLCKNKQLEMALQLYSEM--KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
            ++  LC+ K+L  A+ L+ +   K   ++P+ E+++     C ++G L   VKE+ +  
Sbjct: 617 TMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN-ARKCFEDGFLDETVKELIK-- 673

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                                IDQ Y                        G+++PN   +
Sbjct: 674 ---------------------IDQVY------------------------GSLNPN--PY 686

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I +  L +  K+D AL +F  + + G +        LI+ LC    L  + +++     
Sbjct: 687 TIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLS 746

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             F  +    N + R LC R     A  L  +M + G++
Sbjct: 747 KRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGYD 785


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 215/496 (43%), Gaps = 87/496 (17%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +  L+ A  + G++DKAC  I  M    +  +  T+ V+I    K  R+ +A++ F+ M 
Sbjct: 38  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 97

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +     D   Y+ ++GGLCKN ++  A  L+  M+G+GITP                   
Sbjct: 98  EP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPS------------------ 135

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                     DV   TL+      +       + AY LLQ M   +              
Sbjct: 136 ----------DVTYTTLI-----DVFCKMCQFETAYGLLQLMASRK-------------- 166

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              SP   S+  IIN L K+ K+D A  LF EM   GC  +   YN LI GLC   RL E
Sbjct: 167 --CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHE 224

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +LL  M E+GF+P   T  ++   LC    +  A  L + M  QG  P +  +T+L+ 
Sbjct: 225 AKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVS 284

Query: 438 ELCKHGKAMEAF---------------------------------RFLTDMVQEGFLPDI 464
           +LC   K   A                                  R L  M + G  P++
Sbjct: 285 KLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNV 344

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y+A   GL D K    A   FR +   G  PD+VAYN+++ G CKA R+  AE +   
Sbjct: 345 VTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRY 404

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   GL P++ TYN L+   C+ G ++     L  M+ +    PDV T++TL+ GL + G
Sbjct: 405 MDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR-GRQPDVATWSTLVAGLFMVG 463

Query: 585 RPDDAIMLWNEMEEKG 600
           + D A    N    +G
Sbjct: 464 QADAAYSFLNLAMSQG 479



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 165/369 (44%), Gaps = 38/369 (10%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           IF     PN  S+  ++  L + GK+D A S   EM +   + +VF YN +ID LC + R
Sbjct: 26  IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 85

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +  + E    M E    P   T N++   LC+   V  A +L   M   G  P     T 
Sbjct: 86  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 141

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI   CK  +   A+  L  M      P +  Y + I GL   ++VD A +LF ++   G
Sbjct: 142 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PD V YN +I GLC  QR+ EA+DL   M+  G  P   T+  LI G C +  I +A 
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAG--RP-------------------------- 586
           + L + + K+  +PD++T+T L+  LCI    RP                          
Sbjct: 262 V-LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELG 320

Query: 587 -----DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                D A  L  +M  +G  PN +T+ A   GL        A   FR M E+G++PDM 
Sbjct: 321 RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 380

Query: 642 VFVALISAF 650
            +  L+  F
Sbjct: 381 AYNVLVDGF 389



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 220/491 (44%), Gaps = 60/491 (12%)

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            DC  + N  ++C L+    +  ++DKA     +M +     D   Y+V+I  LCK +++
Sbjct: 29  QDC--KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 86

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A++ +  M      P+ ++++                                N+++ 
Sbjct: 87  SRAIEFFETM------PEPDVVTY-------------------------------NTLLG 109

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  NG + QA +L  +M +G                 ++P+  ++  +I+   K  + +
Sbjct: 110 GLCKNGRVAQACSLFGSM-EG---------------AGITPSDVTYTTLIDVFCKMCQFE 153

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L + M    C   V+ Y ++I+GLC + +++++Y+L  EM+ +G KP   T N++ 
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC +Q +  A +L+  M   G +P     T LI+ LC   +  EAF     M ++G  
Sbjct: 214 HGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 273

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD-VVAYNIIISGLCKAQRVAEAED 520
           PD+V ++  +  L  ++++  AL + R+  A   CP+ V+ Y  I   L + +    A  
Sbjct: 274 PDLVTHTVLVSKLCILRKLRPALSVVRNYPA---CPEAVILYTPIFRELGRRRGFDRAAR 330

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L  +M  +G+ P+V TY     G        +A     RMLE +   PD++ Y  L+DG 
Sbjct: 331 LLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLE-QGIEPDMVAYNVLVDGF 389

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C A R D A  +   M++ G  PN +T+  L+   C+  +  A       M  +G +PD+
Sbjct: 390 CKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 449

Query: 641 FVFVALISAFL 651
             +  L++   
Sbjct: 450 ATWSTLVAGLF 460



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 214/493 (43%), Gaps = 56/493 (11%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  SY  L++ALC++  +D     + EM       D +T   ++   C + +  +A+
Sbjct: 31  CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 90

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             F  + +    D   ++ LL    K G V +AC L   M+   I  ++ T+  LI  F 
Sbjct: 91  EFFETMPEP---DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  + + A  L   M     +     Y  II GLCKN++++ A QL+ EMK +G  PD  
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207

Query: 242 ILSKLITSCSDEGELTLLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             + LI          L VK+ + E +D+ T          ++V NG             
Sbjct: 208 TYNTLIHG--------LCVKQRLHEAKDLLT----------VMVENG------------- 236

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                                P+  +F  +I  L    ++  A  LF+ M + GC  ++ 
Sbjct: 237 -------------------FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +  L+  LC   +L  +  ++R           +T   +FR L RR+    A  L++KM
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNYPACPEAVILYT--PIFRELGRRRGFDRAARLLQKM 335

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +G  P V   T   K L    + M A+R    M+++G  PD+V Y+  + G     R+
Sbjct: 336 ARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRL 395

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D+A ++ R +   G  P++V YN ++   C+  +V    +L + M+++G  P VAT++ L
Sbjct: 396 DMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 455

Query: 541 INGWCKSGNIDQA 553
           + G    G  D A
Sbjct: 456 VAGLFMVGQADAA 468



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 9/300 (3%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L+D L  + R E+   + R +     KP   +   + + LCR   +  A + + +M  
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P V    ++I  LCK  +   A  F   M +    PD+V Y+  +GGL    RV  
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  LF  +   G  P  V Y  +I   CK  +   A  L   M ++   P+V +Y  +IN
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179

Query: 543 GWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           G CK+  +DQA      M  K +G  PD +TY TLI GLC+  R  +A  L   M E G 
Sbjct: 180 GLCKNRKVDQAYQLFEEM--KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLA 659
            P++ITF ALI GLC  DR + A V F+ M ++G  PD+     L+S    L +L P L+
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALS 297



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 5/271 (1%)

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++   L R +     + + R++  Q  +P       L+K LC+ GK  +A   + +M
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +E  +PD+  Y+  I  L   +R+  A+E F  +      PDVV YN ++ GLCK  RV
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRV 117

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           A+A  LF  M   G+ PS  TY  LI+ +CK    + A   L  M  ++  SP V +Y +
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKC-SPTVYSYCS 176

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +I+GLC   + D A  L+ EM+  GC P+R+T+  LI GLC   R   A     +M E G
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +PD   F ALI    +      AF + + M
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGM 267



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 60/305 (19%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY-------GWG 98
           V++A  LF+++K  G C P+  +YN L+  LC       V+ RL E +D        G+ 
Sbjct: 187 VDQAYQLFEEMKLAG-CKPDRVTYNTLIHGLC-------VKQRLHEAKDLLTVMVENGFQ 238

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVA-------------- 144
            DK T T L++  C + +  +A  +F  +   G   + V   +LV+              
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298

Query: 145 -----------------FSKWGE---VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                            F + G     D+A  L+++M    +  N  T+     G     
Sbjct: 299 VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWK 358

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
              +A + F +M + G   D   Y+V++ G CK  +L+MA ++   M  SG+ P+    +
Sbjct: 359 EGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYN 418

Query: 245 KLITSCSDEGEL----TLLVKEIWEDR--DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ- 297
            L+     +G++     LL   +   R  DV T + L   +  +    G  D AY+ L  
Sbjct: 419 TLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMV----GQADAAYSFLNL 474

Query: 298 AMIKG 302
           AM +G
Sbjct: 475 AMSQG 479



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 5/167 (2%)

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V  N ++  L +A+R  +   +F  + ++   P+  +Y  L+   C++G ID+A   ++ 
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M  +E   PDV TY  +ID LC A R   AI  +  M E    P+ +T+  L+ GLCK  
Sbjct: 61  M-AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNG 115

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A   F  M+  G+ P    +  LI  F        A+ +L+ M
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLM 162


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 252/533 (47%), Gaps = 24/533 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ LL + +++G VD+  ++   M +  +  N  T+  +++G+ K   V++A Q    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-- 255
           ++G   D   Y  +I G C+ K L+ A +++ EM   G   +    + LI     E    
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 256 --LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             + L VK   +D D          +++ L  +    +A NL++ M +            
Sbjct: 306 EAMDLFVK--MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE------------ 351

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              KG + PN  ++ ++I++L    KL+ A  L  +M + G M NV  YN LI+G C   
Sbjct: 352 ---KG-IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            +E++ +++  ME    +P   T N + +  C+R +V  A+ ++ KM  +   P V    
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYN 466

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   C+ G    A+R L+ M   G +PD   Y++ I  L   KRV+ A +LF  +   
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P+VV Y  +I G CKA +V EA  +  +M++K  +P+  T+N LI+G C  G + +A
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            L   +M+ K    P V T T LI  L   G  D A   + +M   G  P+  T+   I 
Sbjct: 587 TLLEEKMV-KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQ 645

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             C+  R + A      MKE G+ PD+F + +LI  +        AF VLK M
Sbjct: 646 TYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 277/644 (43%), Gaps = 49/644 (7%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    L+  L   GLV+E   ++ ++  + +C PN Y+YN ++   CK  +V+     + 
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWG 149
            + + G   D +T T L+  YC     D A  VF E+   G   +E  ++ L+       
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +D+A +L  +M D +     +T+ VLI       R  +AL L  +M + G   +   Y 
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDR 267
           V+I  LC   +LE A +L  +M   G+ P+    + LI      G  E  L V E+ E R
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE---------------- 311
           ++   T   N +++      ++ +A  +L  M++ + + DV                   
Sbjct: 423 NLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 312 ----MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                LM  +G V P+  ++  +I++L K  +++ A  LF  + Q   + NV +Y  LID
Sbjct: 482 YRLLSLMNDRGLV-PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C + ++ E++ +L +M      P   T N++   LC    +  A  L  KM     +P
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V  +T+LI  L K G    A+R    M+  G  PD   Y+  I       R+  A ++ 
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMV 660

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC-- 545
             +  +G  PD+  Y+ +I G     R   A  +   M   G  PS  T+  LI      
Sbjct: 661 AKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEM 720

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G +             + G P V   + +++        D  + L  +M E G  PN 
Sbjct: 721 KYGKV-------------KGGEPGVCVMSNMMEF-------DIVVELLEKMVEHGVTPNA 760

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEK-GMKPDMFVFVALIS 648
            ++  L+ G+C+    R A   F  M++K G+ P   VF AL+S
Sbjct: 761 KSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 160/635 (25%), Positives = 294/635 (46%), Gaps = 54/635 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC----KSCS 81
           C  +  A   LI  L     ++EA  LF ++K +  C P   +Y  L++ALC    KS +
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD-CYPTVRTYTVLIKALCGSERKSEA 342

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
           ++LV    KEM++ G   + +T T L+   C+  + +KA  +  ++++ G +   + ++ 
Sbjct: 343 LNLV----KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNA 398

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K G ++ A +++E M+  N+R N +T+  LI G+ K++ V KA+ + +KM +  
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERK 457

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTL 258
              D   Y+ +I G C++   + A +L S M   G+ PD    + +I S   S   E   
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK----------------- 301
            + +  E +DV    ++  +++      G +++A+ +L+ M+                  
Sbjct: 518 DLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 302 ---GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
              G+      +E  M+ K  + P  S+  I+I+ LLKDG  D A   F++M   G   +
Sbjct: 578 CTDGKLKEATLLEEKMV-KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPD 636

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y   I   C   RL+++ +++ +M+E+G  P  FT +S+ +          A  +++
Sbjct: 637 AHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLK 696

Query: 419 KMRVQGHEPWVKHNTLLIKELC--KHGKA-------------ME---AFRFLTDMVQEGF 460
           +M   G EP       LIK L   K+GK              ME       L  MV+ G 
Sbjct: 697 RMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGV 756

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDIC-AHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            P+   Y   + G+ +I  + +A ++F  +    G  P  + +N ++S  CK ++  EA 
Sbjct: 757 TPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAA 816

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            + ++MI  G +P + +  +LI    K G  ++       +L+      D + +  +IDG
Sbjct: 817 KVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQC-GYYDDELAWKIIIDG 875

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           +   G  +    L+N ME+ GC  +  T+  LI G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 188/398 (47%), Gaps = 46/398 (11%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKG-EPIADVGVEMLMIFKGTVSPN--------TSSFD 328
           S++ +L++NG +   + +   MIK  + +AD    + +  K     +           ++
Sbjct: 128 SLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYN 187

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++N+L + G +D    ++ EM +     N++ YN +++G C    +EE+ + +  + E+
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEA 247

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P  FT  S+    C+R+D+  A                                   
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSA----------------------------------- 272

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F+   +M  +G   + V Y+  I GL   +R+D A++LF  +    C P V  Y ++I  
Sbjct: 273 FKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKA 332

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC ++R +EA +L  EM  KG+ P++ TY +LI+  C    +++A   L +MLEK    P
Sbjct: 333 LCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK-GLMP 391

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +VITY  LI+G C  G  +DA+ +   ME +   PN  T+  LI G CK +  +A  V  
Sbjct: 392 NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLN 451

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +M++ K + PD+  + +LI       N   A+ +L  M
Sbjct: 452 KMLERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 25/248 (10%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS------ 79
           +SP    +  LI+  G +G    A ++  ++   G C P+ +++  L++ L +       
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG-CEPSQHTFLSLIKHLLEMKYGKVK 726

Query: 80  ------------CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
                          D+V   L++M ++G   +  +   L+   C  G    A  VF+ +
Sbjct: 727 GGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786

Query: 128 IDHGWVD--EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKS 184
                +   E VF+ LL    K  + ++A ++++ M  C   L +   C +LI    KK 
Sbjct: 787 QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMI-CVGHLPQLESCKILICRLYKKG 845

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
             ++   +F  + + G+  D   + +II G+ K   +E   +L++ M+ +G T   +  S
Sbjct: 846 EKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYS 905

Query: 245 KLITSCSD 252
            LI    D
Sbjct: 906 LLIEGPPD 913


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 180/654 (27%), Positives = 290/654 (44%), Gaps = 44/654 (6%)

Query: 46  VEEANMLFDQV-----KREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYD 100
           V+E  M FD V      R+   +P   +   +L  L K   VD+V +   E+   G   D
Sbjct: 169 VQEKRM-FDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPD 227

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIER 160
            Y    +++ +C    F KA  +   + +   ++  V+++L+    K   V +A E+   
Sbjct: 228 IYIYVAVIRSFCELKNFAKAKEMIQRM-ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNG 286

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           +    +  +E T+C L+ G  K    +    + D+M + GF    A    ++ GL +  +
Sbjct: 287 LIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGK 346

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWED----RDVNTMT 273
           +  A  L + +K  G  P   + + LI S   +G   E  LL KE+ E      DV T +
Sbjct: 347 VVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDV-TYS 405

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GEPIADVGVEML 313
           +L +S  R     G +D A + L  MI                     G   A V     
Sbjct: 406 ILIDSFCR----RGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           MI KG + P   S+  +I+     GKL  A  L+ EMT  G   N + +  LI  L  +N
Sbjct: 462 MIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRAN 520

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R+ +++ L  EM E    P   T N M    C+  + V A  L+ +M  +G  P      
Sbjct: 521 RMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYR 580

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI  LC  G+  EA +F+ D+ +E F  + +CYSA + G     R+  AL + R++   
Sbjct: 581 PLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKR 640

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   D+V Y ++I G  K Q  +    L   M  + L P    Y  +I+G+ K+G++ +A
Sbjct: 641 GVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 M++ E  +P+++TYTTLI+ LC AG  D A +LW EM      PN +T+   + 
Sbjct: 701 FGIWDIMID-EGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD 759

Query: 614 GLCK-CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L +     +A  +H  M+  KG+  +   +  L+  F        A ++L EM
Sbjct: 760 HLAREGSMEKAVQLHNDML--KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 249/530 (46%), Gaps = 19/530 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F +L+ ++ +   +  +  +   M  C +    +T   +++G  K  RVD  L LF ++ 
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGEL 256
             G   D  +Y  +I   C+ K    A ++   M+ S +  +  + + LI   C +    
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKN---- 274

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
               K +WE  ++       N +++  ++   +     +L      E     GV   MI 
Sbjct: 275 ----KRVWEAVEIK------NGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE 324

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            G V P  ++   ++  L + GK+  A  L   + ++G M ++F+YN LI+ LC   + +
Sbjct: 325 LGFV-PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+  L +EM E G      T + +    CRR  +  A++ + KM + G +  V     LI
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK G    A  F  +M+ +G  P +V Y++ I G  +  ++  A  L+ ++   G  
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIA 503

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+   +  +IS L +A R+ +A  LF+EM+ + ++P+  TYN++I G CK GN  +A   
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L++M++K    PD  TY  LI  LC  GR  +A    +++  +    N + + AL+ G C
Sbjct: 564 LNQMVQK-GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  R R AL   R M ++G+  D+  +  LI   + E +    F +LK M
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 268/620 (43%), Gaps = 62/620 (10%)

Query: 69  YNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           YN L+  LCK+  V + VE++   +Q  G    + T   L+   C   +F+    V +E+
Sbjct: 264 YNVLIHGLCKNKRVWEAVEIKNGLIQK-GLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 128 IDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           I+ G+V  E   S L+    + G+V  A +L+ R+       +   +  LI+   K  + 
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D+A  LF +M + G  ++   Y ++I   C+  +L+ A+    +M  +GI       + L
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 247 ITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           I      G L+  V    E  D+ +    +   S++    + G + +A+ L   M  G+ 
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT-GKG 501

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           IA               PNT +F  +I+ L +  ++  A  LF EM +   M N   YN 
Sbjct: 502 IA---------------PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I+G C      +++ELL +M + G  P  +T   +   LC    V  A   +  +    
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL---- 602

Query: 425 HEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           H    K N +    L+   CK G+  +A     +MV+ G   D+VCY+  I G I  +  
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
                L +++      PD V Y  +I G  KA  V +A  +++ MI +G  P++ TY  L
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTL 722

Query: 541 INGWCKSGNIDQAMLCLSRMLEKES-----------------GS---------------- 567
           IN  CK+G +D+A L    ML   S                 GS                
Sbjct: 723 INELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLL 782

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            + ++Y  L+ G C  GR ++A  L +EM +    P+ IT+  +I   C+      A+  
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEF 842

Query: 628 FRMMKEKGMKPDMFVFVALI 647
           +  M  KG+KPD   +  LI
Sbjct: 843 WDTMLNKGLKPDTLAYNFLI 862



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 161/608 (26%), Positives = 260/608 (42%), Gaps = 60/608 (9%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +  AL  L+  L   G V +A  L ++VK+ G  +P+ + YN L+ +LCK          
Sbjct: 330 TEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG-AMPSLFVYNALINSLCKD--------- 379

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
                                     G+FD+A  +F E+ + G   ++  +SIL+ +F +
Sbjct: 380 --------------------------GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCR 413

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++D A   + +M    I++    +  LI+G  K   +  A+  FD+M   G       
Sbjct: 414 RGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVS 473

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I G C   +L  A +LY EM G GI P+    + LI++      +T   +   E  
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 268 DVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---------- 315
           + N M   +  N ++      G+  +A+ LL  M++   + D      +I          
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 316 ---------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                     +     N   +  +++   K+G+L  AL + REM + G   ++  Y  LI
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           DG          + LL+ M +   +P      SM     +   V  A  +   M  +G  
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +   T LI ELCK G   +A     +M+     P+ V Y   +  L     ++ A++L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             D+   G   + V+YNI++ G CK  RV EA  L +EMI   + P   TY+ +I   C+
Sbjct: 774 HNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            GN+D A+     ML K    PD + Y  LI G CIAG    A  L ++M  +G  PN+ 
Sbjct: 833 RGNLDGAIEFWDTMLNK-GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891

Query: 607 TFMALITG 614
           T  +L  G
Sbjct: 892 THKSLSHG 899



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 3/145 (2%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L   G +E+A  L + + + GL + N  SYN L+   CK   V+     L EM D     
Sbjct: 761 LAREGSMEKAVQLHNDMLK-GL-LANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFP 818

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
           D  T + ++   C  G  D A+  ++ +++ G   D   ++ L+      GE+ KA EL 
Sbjct: 819 DCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELR 878

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKK 183
           + M    ++ N+ T   L HG  +K
Sbjct: 879 DDMIRRGVKPNQATHKSLSHGASRK 903


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 186/354 (52%), Gaps = 5/354 (1%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + +  VSPN  +++I+I      G LD+AL  F  M + GC+ NV  YN LIDG C   +
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
           +++ +ELLR M   G +P   + N +   LCR   +     ++ +M  +G+    V +NT
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L IK  CK G   +A     +M++ G  P ++ Y++ I  +     ++ A E    +   
Sbjct: 316 L-IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G CP+   Y  ++ G  +   + EA  +  EMI  G  PSV TYN LING C +G +  A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 554 MLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           +  L  M  KE G +PDV++Y+T++ G C +   D+A+ +  +M  KG  P+ IT+ +LI
Sbjct: 435 IAVLEDM--KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G C+  R + A   F  M   G+ PD F + ALI+A+  E +   A ++  EM
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 258/566 (45%), Gaps = 41/566 (7%)

Query: 118 DKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           DKALS+ +    HG++       ++L         +  A  + + M    +  N  T+ +
Sbjct: 151 DKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNI 210

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     +D AL+ FD+M K G   +   Y+ +I G CK ++++   +L   M   G
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270

Query: 236 ITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           + P+    + +I     EG   E++ ++ E+   R  +   +  N++++     G     
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEM-NKRGYSLDEVTYNTLIKGYCKEG----- 324

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            N  QA++       +  EML   +  +SP+  ++  +I+++ K G ++ A     +M  
Sbjct: 325 -NFHQALV-------MHAEML---RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   N   Y  L+DG      + E+Y +L+EM ++GF P+  T N++    C    +V 
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVD 433

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ ++  M+ +G  P V   + ++   C+     EA R    MV +G  PD + YS+ I 
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQ 493

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  + +R   A +LF ++   G  PD   Y  +I+  C    + +A  L NEM+ KG++P
Sbjct: 494 GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP 553

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT--------------TLID 578
            V TY++LING  K     +A   L ++  +ES   DV  +T              +LI 
Sbjct: 554 DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C+ G   +A  ++  M EK   P+   +  +I G C+    R A   ++ M + G   
Sbjct: 614 GFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673

Query: 639 DMFVFVALISAF-----LSELNPPLA 659
                +AL+        ++ELN  +A
Sbjct: 674 HTVTVIALVKTLHKEGKVNELNSVIA 699



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 2/346 (0%)

Query: 322 PNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   S++ +++  ++  + +  A ++F+EM Q     NVF YN LI G C +  L+ +  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
               ME+ G  P   T N++    C+ + +     L+R M ++G EP +    ++I  LC
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  E    LT+M + G+  D V Y+  I G         AL +  ++  HG  P V+
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVI 346

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I  +CKA  +  A +  ++M  +GL P+  TY  L++G+ + G +++A   L  M
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           ++    SP V+TY  LI+G CIAG+  DAI +  +M+EKG  P+ +++  +++G C+   
Sbjct: 407 IDN-GFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AL   R M  KG+KPD   + +LI  F  +     A ++  EM
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/570 (23%), Positives = 249/570 (43%), Gaps = 49/570 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDL 84
           C  +      +++    + L+++A  +    +  G  +P   SYN +L+A  +S  ++  
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGF-MPGVLSYNAVLDATIRSKRNISF 188

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLV 143
            E   KEM       + +T   L++ +C +G  D AL  F+ +   G +   V ++ L+ 
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            + K  ++D   EL+  M    +  N  ++ V+I+G  ++ R+ +   +  +M K G++ 
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y+ +I G CK      AL +++EM   G++P     + LI S    G +    + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 264 WEDR------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG 302
            + R      +  T T L +   +     G +++AY +L+               A+I G
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQ----KGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424

Query: 303 EPIADVGVEMLMIF-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
             IA   V+ + +      KG ++P+  S+  +++   +   +D AL + R+M   G   
Sbjct: 425 HCIAGKMVDAIAVLEDMKEKG-LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   Y++LI G C   R +E+ +L  EM   G  P  FT  ++    C   D+  A+ L 
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M  +G  P V   ++LI  L K  +  EA R L  +  E  +P  V Y   I    +I
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603

Query: 478 KRVDL---------------ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   +               A ++F  +      PD  AYN++I G C+   + +A  L+
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLY 663

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            EM+  G +    T   L+    K G +++
Sbjct: 664 KEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 220/500 (44%), Gaps = 39/500 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  SYN ++  LC+   +  +   L EM   G+  D+ T   L++ YC  G F +AL +
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E++ HG     + ++ L+ +  K G +++A E +++M    +  NE+T+  L+ GF +
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K  +++A ++  +M  +GF+     Y+ +I G C   ++  A+ +  +MK  G+TPD   
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 243 LSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S +++    S + +  L VK     + +   T+  +S+++         +A +L   M+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +      VG          + P+  ++  +IN    +G L  A+ L  EM + G + +V 
Sbjct: 513 R------VG----------LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ LI+GL    R  E+  LL ++      P+  T +++         +    N+  K 
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL---------IENCSNIEFKS 607

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            V            LIK  C  G   EA +    M+++   PD   Y+  I G      +
Sbjct: 608 VVS-----------LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDI 656

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A  L++++   G     V    ++  L K  +V E   +   ++    +       +L
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVL 716

Query: 541 INGWCKSGNIDQAMLCLSRM 560
           +    + GN+D  +  L+ M
Sbjct: 717 VEINHREGNMDVVLDVLAEM 736


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 44/559 (7%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE-LIERMDDCNIRLNEKTFCV 175
           +KALS+ N    +G++   + ++ +L A  +  +  K  E + + M +  +  N  T+ +
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     ++  L  F +M ++G   +   Y+ II   CK +++  A +L   M   G
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 236 ITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           + P+    + +I     EG   E + +++E+ + R V       N+++    + G+  QA
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF-NTLINGYCNVGNFHQA 327

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   M+K                  +SPN  ++  +IN++ K G L+ A+    +M  
Sbjct: 328 LVLHAEMVKN----------------GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQD 409
            G   N   Y  LIDG      L+++Y++++EM E+GF PT  T N++    C   R +D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             G   L+++M  +G  P V   + +I   C++ +  +AF+   +MV +G  PD+  YS+
Sbjct: 432 ASG---LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL   +R+    +LF+++ + G  PD V Y  +I+  C    + +A  L +EMI KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID----------- 578
             P + TYN+LING+ K     +A   L ++L +ES  P+ ITY TLID           
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES-VPNEITYNTLIDNCNNLEFKSAL 607

Query: 579 ----GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
               G C+ G  ++A  +   M +KG   N   +  +I G  K      A   ++ M   
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P     +AL  +   E
Sbjct: 668 GFAPHSVTIMALAKSLYHE 686



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 269/581 (46%), Gaps = 39/581 (6%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS-CSVD 83
           +C  S      +++    V L+ +A  + +  K  G  +P   SYN +L+A+ ++  SV 
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGF-MPGVLSYNAILDAVIRTKQSVK 185

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL 142
           + E   KEM + G   + YT   L++ +C +G  +  L  F E+  +G +   V ++ ++
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTII 245

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            A+ K  ++ +A +L+  M    +  N  ++ V+I+G  ++ ++ +  ++ ++M+K  + 
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK- 261
            D   ++ +I G C       AL L++EM  +G++P+    + LI S    G L   ++ 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 262 -EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            +   DR ++       +++      G + QAY +++ M+                +   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV----------------ENGF 409

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P   +++ +IN     G+++ A  L +EM + G + +V  Y+ +I G C +  LE++++
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM   G  P   T +S+ + LC+++ +    +L ++M   G  P     T LI   C
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
             G   +A R   +M+Q+GF PDIV Y+  I G     R   A  L   +      P+ +
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 501 AYNIII---------------SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
            YN +I                G C    + EA+ +   M+ KG   +   YN++I+G  
Sbjct: 590 TYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHS 649

Query: 546 KSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGR 585
           K GNI++A      ML   SG +P  +T   L   L   G+
Sbjct: 650 KVGNIEKAYNLYKEML--HSGFAPHSVTIMALAKSLYHEGK 688



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 188/379 (49%), Gaps = 7/379 (1%)

Query: 292 AYN-LLQAMIKGEPIADV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +YN +L A+I+ +    +  G+   M+  G VSPN  +++I+I      G L++ L  F 
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMVESG-VSPNVYTYNILIRGFCTAGNLEMGLXFFG 227

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + GC+ NV  YN +ID  C   ++ E+++LLR M   G  P   + N +   LCR  
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287

Query: 409 DVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            +     ++ +M  + + P  V  NTL I   C  G   +A     +MV+ G  P++V Y
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTL-INGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I  +     ++ A+E    +   G  P+   Y  +I G  +   + +A  +  EM+ 
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  P++ TYN LING C  G ++ A   L  M+E+    PDV++Y+T+I G C     +
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQELE 465

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  L  EM  KG +P+  T+ +LI GLCK  R       F+ M   G+ PD   + +LI
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 648 SAFLSELNPPLAFEVLKEM 666
           +A+  E +   A  +  EM
Sbjct: 526 NAYCIEGDLDKALRLHDEM 544



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 213/501 (42%), Gaps = 41/501 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  SYN ++  LC+   +      L+EM    +  D+ T   L+  YCN G F +AL +
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E++ +G     V ++ L+ +  K G +++A E +++M D  +  N +T+  LI GF +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  + +A Q+  +M ++GF      Y+ +I G C   ++E A  L  EM   G  PD   
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 243 LSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S +I+    + E E    +K     + ++      +S+++ L     + +  +L Q M+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 301 K-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
             G P                 P+  ++  +IN    +G LD AL L  EM Q G   ++
Sbjct: 511 SLGLP-----------------PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G    +R +E+  LL ++      P   T N++    C   +   AL     
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL----- 607

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
                          L+K  C  G   EA R L  M+Q+G+  +   Y+  I G   +  
Sbjct: 608 --------------ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A  L++++   G  P  V    +   L    +  E   L +  +    I   A   +
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKV 713

Query: 540 LINGWCKSGNIDQAMLCLSRM 560
           LI    K GN+D     L  M
Sbjct: 714 LIGINSKEGNMDAVFNVLKDM 734



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 138/264 (52%), Gaps = 3/264 (1%)

Query: 405 CRRQDVVG-ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME-AFRFLTDMVQEGFLP 462
           C R +++  AL++V   +  G  P V     ++  + +  ++++ A     +MV+ G  P
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++  Y+  I G      +++ L  F ++  +GC P+VV YN II   CK +++ EA  L 
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M  KGL P++ +YN++ING C+ G + +    L  M  K    PD +T+ TLI+G C 
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCN 320

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G    A++L  EM + G +PN +T+  LI  +CK      A+     M+++G+ P+   
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  LI  F  +     A++++KEM
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEM 404


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/603 (25%), Positives = 270/603 (44%), Gaps = 22/603 (3%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF ++  +G+C PN  ++N L+  LC   ++      LK+M++ G+     T   LL  Y
Sbjct: 220 LFREMSDKGIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G++  A+ + + +I  G   D   +++ +          KA  L+++M    I  NE
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  LI+GFVK+ ++  A Q+F++M+K   + +   Y+ +IGG C     E AL+L   
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNG 287
           M+ +G+  +      L+       +  L  K + E   VN M    +    ++  L  NG
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFEL-AKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D+A  L+  M                +K  V+P+  ++  +IN   + G +  A  + 
Sbjct: 458 MLDEAVQLVGNM----------------YKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M + G + N  +Y+ LI   C    + E+ ++   M  +G    HFT N +   LCR 
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A   +  M   G  P       +I      G  + AF F  DM++ G  P    Y
Sbjct: 562 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 621

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
            + + GL     +  A +    +       D V YN +++  CK+  + EA  LF++M+ 
Sbjct: 622 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 681

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
             ++P   TY+ L+ G C+ G    A+      + + +  P+ + YT L+DGL  AG P 
Sbjct: 682 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 741

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A   + EM +KG  P+ + F A+I    +  +   A   F  M+  G+ P++  +  L+
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801

Query: 648 SAF 650
             F
Sbjct: 802 HGF 804



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 264/611 (43%), Gaps = 106/611 (17%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+  + K G +D A E  E +     + +  T  +++   VK  R +    LF +M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           +  G   +   ++++I GLC    L+ A  L  +M+ +G  P     + L+     +G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 257 TLLVKEI------WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
              ++ I        + DV T  +  ++    L +N    +AY LL+ M K         
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDN----LCTNHRSAKAYLLLKKMRK--------- 331

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           EM       +SPN  +++ +IN  +K+GK+ +A  +F EM++     N   YN LI G C
Sbjct: 332 EM-------ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 384

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ----GHE 426
           +    EE+  LL  ME +G +    T  ++   LC+ +    A  L+ +MRV     GH 
Sbjct: 385 HVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 444

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE- 485
            +    T+LI  LCK+G   EA + + +M ++G  PD++ YS+ I G   +  +  A E 
Sbjct: 445 AY----TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEI 500

Query: 486 ------------------LFRDICAHGCCPDVVAY----------------NIIISGLCK 511
                             L  + C HG   + +                  N+++S LC+
Sbjct: 501 ICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCR 560

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGW--------------------------- 544
             ++ EAE     M   GL+P+  TY+ +ING+                           
Sbjct: 561 DGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT 620

Query: 545 --------CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
                   CK GN+ +A   L+R L    G+ D + Y TL+   C +G   +A+ L+++M
Sbjct: 621 YGSLLKGLCKGGNLVEAKKFLNR-LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 679

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG-MKPDMFVFVALISAFLSELN 655
            +    P+  T+ +L+TGLC+  +   A+  F     +G + P+  ++  L+       +
Sbjct: 680 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 739

Query: 656 PPLAFEVLKEM 666
           P  AF   +EM
Sbjct: 740 PKAAFYFFEEM 750



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 273/636 (42%), Gaps = 35/636 (5%)

Query: 43   VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ--DYGWGYD 100
            VG  EEA  L D ++  GL + N  +Y  LL  LCK    +L +  L+ M+  D   G+ 
Sbjct: 386  VGDFEEALRLLDHMEAAGLRL-NEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 444

Query: 101  KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
             YT+  L+   C +G  D+A+ +   +   G   D   +S L+  F + G +  A E+I 
Sbjct: 445  AYTV--LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 502

Query: 160  RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            RM    + LN+  +  LI+ F +   V +A++++  M  +G  +D    +V++  LC++ 
Sbjct: 503  RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 562

Query: 220  QLEMALQLYSEMKGSGITPD--------------------FEILSKLITSCSDEGELTL- 258
            +L  A +    M   G+ P+                    F     +I         T  
Sbjct: 563  KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 622

Query: 259  -LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA-YN-LLQAMIKGEPIADVGVEMLMI 315
             L+K + +  ++       N +  I    G++D   YN LL    K   + +       +
Sbjct: 623  SLLKGLCKGGNLVEAKKFLNRLHYI---PGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 679

Query: 316  FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM-QNVFLYNNLIDGLCNSNR 374
             +  V P++ ++  ++  L + GK   A+ LF      G +  N  +Y  L+DGL  +  
Sbjct: 680  VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 739

Query: 375  LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
             + ++    EM + G  P     N++     RR  ++ A +    MR  G  P +    +
Sbjct: 740  PKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNI 799

Query: 435  LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            L+    K    +      + M++EG  PD + + + I GL      DL ++L   +   G
Sbjct: 800  LLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 859

Query: 495  CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
               D   +NI+I+   ++ ++ +A DL N M T G+ P   TYN + NG  K     ++ 
Sbjct: 860  TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFREST 919

Query: 555  LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            + L  MLE     P    Y TLI+G+C  G    A  L +EME  G   + +   A++ G
Sbjct: 920  VVLHEMLE-NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 978

Query: 615  LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  C +   A++    M    + P +  F  L+  F
Sbjct: 979  LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRF 1014



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 188/381 (49%), Gaps = 4/381 (1%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDLALS 345
           SI   ++LL  +   E + D  VE   +  G V   P+  + ++I+ +++KD + +L  S
Sbjct: 161 SIPSVFDLLIRVYLKEGMIDYAVETFELV-GLVGFKPSVYTCNMILASMVKDKRTELVWS 219

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LFREM+  G   NV  +N LI+GLC    L+++  LL++MEE+GF PT  T N++    C
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++     A+ L+  M  +G E  V    + I  LC + ++ +A+  L  M +E   P+ V
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I G +   ++ +A ++F ++      P+ V YN +I G C      EA  L + M
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              GL  +  TY  L+NG CK    + A   L RM   +      I YT LIDGLC  G 
Sbjct: 400 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH-IAYTVLIDGLCKNGM 458

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A+ L   M + G  P+ IT+ +LI G C+    ++A      M   G+  +  ++  
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  F    N   A +V   M
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVM 539



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 138/591 (23%), Positives = 246/591 (41%), Gaps = 75/591 (12%)

Query: 24   SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
            SR  + P ++ +  +I   GS+G    A   FD + + G   P+ ++Y  LL+ LCK  +
Sbjct: 575  SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH-PSFFTYGSLLKGLCKGGN 633

Query: 82   VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSI 140
            +   +  L  +       D      LL   C SG   +A+++F++++ +  + D + +S 
Sbjct: 634  LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 693

Query: 141  LLVAFSKWGE-VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            LL    + G+ V   C     M    +  N   +  L+ G  K      A   F++M K 
Sbjct: 694  LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 753

Query: 200  GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--- 256
            G   D   ++ II    +  Q+  A   +S M+  G+ P+    + L+   S +  L   
Sbjct: 754  GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 813

Query: 257  -----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                 T++ + I+ D+      L  +S++  L  +G                 I D+GV+
Sbjct: 814  LSLYSTMMREGIFPDK------LTFHSLILGLSKSG-----------------IPDLGVK 850

Query: 312  ML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
            +L  MI +GT++ +  +F+I+IN   + GK+  A  L   M  +G   +   YN++ +GL
Sbjct: 851  LLGKMIMEGTLA-DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 909

Query: 370  CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
               +   ES  +L EM E+G  P H    ++   +CR  D+ G                 
Sbjct: 910  NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG----------------- 952

Query: 430  KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                              AF+   +M   GF    V  SA + GL+   + + A+ +   
Sbjct: 953  ------------------AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 994

Query: 490  ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +      P +  +  ++   C+  ++AEA  L   M   GL   V  YN+LI G C +G+
Sbjct: 995  MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1054

Query: 550  IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
               A      M  ++   P++ TY  L+D +  A        L  +++E+G
Sbjct: 1055 SAAAFELYEEMRHRDL-CPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 246/605 (40%), Gaps = 29/605 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI     VG ++ A  +  ++ R GL V N   Y+ L+   C+  +V         M   
Sbjct: 484  LINGFCRVGNIKSAKEIICRMYRSGL-VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 542

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G G D +T   L+   C  G+  +A      +   G V   + +  ++  +   G+   A
Sbjct: 543  GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 602

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
                + M  C    +  T+  L+ G  K   + +A +  +++     A D+ MY+ ++  
Sbjct: 603  FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 662

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             CK+  L  A+ L+ +M  + + PD    S L+T    +G+    V        +   TL
Sbjct: 663  TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV--CLFGTAMGRGTL 720

Query: 275  LCNSIMRI-----LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI-------------- 315
              N +M       L   G    A+   + M+K     D      +I              
Sbjct: 721  FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 780

Query: 316  FKGT-----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            F  T     V PN ++++I+++   K   L   LSL+  M + G   +   +++LI GL 
Sbjct: 781  FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             S   +   +LL +M   G     FT N +         +  A +LV  M   G  P   
Sbjct: 841  KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 900

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                +   L K     E+   L +M++ G +P    Y   I G+  +  +  A +L  ++
Sbjct: 901  TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             A G     VA + ++ GL    +  +A  + + M+   L+P++AT+  L++ +C+   I
Sbjct: 961  EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1020

Query: 551  DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             +A L L  ++E      DV+ Y  LI G+C  G    A  L+ EM  +   PN  T+  
Sbjct: 1021 AEA-LKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1079

Query: 611  LITGL 615
            L+  +
Sbjct: 1080 LVDAI 1084



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 162/397 (40%), Gaps = 51/397 (12%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G + +AN  F  ++  G+C PN  +YN LL    K  ++         M   G   DK T
Sbjct: 773  GQMMKANDFFSTMRWWGVC-PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 831

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
               L+     SG  D  + +  ++I  G + D+  F+IL+  +S+ G++ KA +L+  M+
Sbjct: 832  FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 891

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +  +  T+  + +G  KKS   ++  +  +M ++G     A Y  +I G+C+   ++
Sbjct: 892  TLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQ 951

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
             A +L  EM+  G                          E+ E           ++++R 
Sbjct: 952  GAFKLKDEMEALGFGS----------------------HEVAE-----------SAMVRG 978

Query: 283  LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
            L+  G  + A  +L  M++   +                P  ++F  +++   +D K+  
Sbjct: 979  LLHCGKTEDAMLVLDHMLRMRLL----------------PTIATFTTLMHRFCRDAKIAE 1022

Query: 343  ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
            AL L   M   G   +V  YN LI G+C +     ++EL  EM      P   T   +  
Sbjct: 1023 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1082

Query: 403  CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             +    +++    L+  ++ +G   W      L KEL
Sbjct: 1083 AISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKEL 1119


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 272/596 (45%), Gaps = 25/596 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P +Y+Y  L++   ++   +L      ++   G   D    + LL+ +C + + D+AL +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 124 -FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHG 179
             +   + G V D   ++ILL +    G+  +A +L+  M +     +     +  +I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K+  V+KA  LF +M + G   D   Y  ++  LCK + ++ A     +M   G+ PD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQ 297
               + LI   S  G+    V+   E R  + +   +  N++M  L   G I +A ++  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 298 AM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            M +KG+                 +P+  S+ I++N     G L     LF  M   G  
Sbjct: 351 TMAMKGQ-----------------NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +  +N LI    N   L+++  +  EM + G KP   T  ++   LCR   +  A+  
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  QG  P       LI+  C HG  ++A   +++++  G   DIV + + I  L  
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           + RV  A  +F      G  PD V YN+++ G C   ++ +A  +F+ M++ G+ P+V  
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L+NG+CK G ID+ +     ML+K    P  I Y  +IDGL  AGR   A + ++EM
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 632

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            E G A N+ T+  ++ GL K      A+  F+ ++   +K D+     +I+    
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 290/646 (44%), Gaps = 43/646 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V    + + LL+  C++   D  
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH-LLKGFCEAKRTDEA 167

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++   LL+  CN G+  +A  +   + + G V   D   ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M   G 
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----- 256
             D   Y+ +I G     Q + A++++ EM+   I PD   L+ L+ S    G++     
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 257 ---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
              T+ +K   ++ DV + T++ N       + G +    +L   M+ G+ IA V     
Sbjct: 348 VFDTMAMK--GQNPDVFSYTIMLNG----YATKGCLVDMTDLFDLML-GDGIAPVICTFN 400

Query: 314 MIFKG--------------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           ++ K                      V P+  ++  +I  L + GK+D A+  F +M   
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + + + Y+ LI G C    L ++ EL+ E+  +G +       S+   LC+   V+ A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            N+       G  P      +L+   C  GK  +A R    MV  G  P++V Y   + G
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              I R+D  L LFR++   G  P  + YNIII GL +A R   A+  F+EM   G+  +
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TY++++ G  K+   D+A+  L + L   +   D+IT  T+I G+    R ++A  L+
Sbjct: 641 KCTYSIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
             +   G  P  +T+  +IT L K      A   F  M+  G +PD
Sbjct: 700 ASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 182/364 (50%), Gaps = 9/364 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDG-----KLDLALSLFREMT-QIGCMQNVFLYNN 364
           E+ + F G +       D II + L  G     + D AL +    T ++GC+ +VF YN 
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI 189

Query: 365 LIDGLCNSNRLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           L+  LCN  +  ++ +LLR M E G    P     N++     +  DV  A +L ++M  
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P +   + ++  LCK     +A  FL  MV +G LPD   Y+  I G     +   
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ +F+++      PDVVA N ++  LCK  ++ EA D+F+ M  KG  P V +Y +++N
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+   G +   M  L  ++  +  +P + T+  LI      G  D A++++NEM + G  
Sbjct: 370 GYATKGCLVD-MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+M +I  LC+  +   A+  F  M ++G+ PD + +  LI  F +  +   A E+
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488

Query: 663 LKEM 666
           + E+
Sbjct: 489 ISEI 492



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 25/295 (8%)

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R EE+++LL E++  G       LN     L R                 G  P      
Sbjct: 46  RPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAAC----------GSGP-----A 90

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L +    +     +  R L+        P    Y+  +       R +LAL  F  +   
Sbjct: 91  LAVALFNRAASRAQGPRVLS--------PTSYTYAILMDCCTRAHRPELALAFFGQLLRT 142

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAED-LFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           G   D +  + ++ G C+A+R  EA D L +     G +P V +YN+L+   C  G   Q
Sbjct: 143 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 202

Query: 553 AMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           A   L  M E  +  SPDV+ Y T+IDG    G  + A  L+ EM ++G  P+ +T+ ++
Sbjct: 203 ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 262

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  LCK      A    R M  KG+ PD + +  LI  + S      A  V KEM
Sbjct: 263 VHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/621 (26%), Positives = 280/621 (45%), Gaps = 59/621 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQD 94
           LI CL  +G ++ +   F  + + G  V N+   N LL+ LC    V + +++ L+ M +
Sbjct: 104 LIGCLCRMGRLKHSFATFGLILKTGWRV-NDIVINQLLKGLCDGKRVGEAMDVLLQRMPE 162

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWV---DEHVFSILLVAFSKWGE 150
            G   D  + + LL+ +CN  + ++AL +   +  DHG     +   ++ ++    K   
Sbjct: 163 LGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQL 222

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            D+A  + ++M D  ++ N  T+  LIHG++   +  + +Q+ +KM+  G   D   Y  
Sbjct: 223 FDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGS 282

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++  LC   ++   L L  E   +G++PD  I +   ++ +                   
Sbjct: 283 LLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNIFFSAYAK------------------ 321

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                C          G ID+A ++   M                 +  +SPN  ++  +
Sbjct: 322 -----C----------GMIDKAMDIFNKM----------------RQHGLSPNVVNYGAL 350

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L K G++D A   F +M   G   N+ ++N+L+ GLC  ++ E + EL+ EM + G 
Sbjct: 351 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 410

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N++   LC    V+    L+  M   G  P     T LI   C  G+  EA +
Sbjct: 411 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEK 470

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               MV  G  P  V Y+  + G     R+D A  LFR++   G  P VV YN I+ GL 
Sbjct: 471 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 530

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           + +R +EA++L+  MI  G    + TYN+++NG CKS  +D+A      +  K     ++
Sbjct: 531 QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK-GLQLNI 589

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           IT+T +I  L   GR +DA+ L+  +   G  PN +T+  +   L +          F  
Sbjct: 590 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 649

Query: 631 MKEKGMKPDMFVFVALISAFL 651
           M++ G  P+  +  AL+   L
Sbjct: 650 MEKNGTAPNSQMLNALVRRLL 670



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 252/557 (45%), Gaps = 25/557 (4%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACE-LIER 160
           T + L+   C  G+   + + F  I+  GW V++ V + LL        V +A + L++R
Sbjct: 100 TYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQR 159

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS---DAAMYDVIIGGLCK 217
           M +     +  ++ +L+ GF  ++R ++AL+L   M      S   +   Y  +I GLCK
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
            +  + A  ++ +M  +G+ P+ +  + LI      G+   +V ++ E      +   C 
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVV-QMLEKMSARGLKPDCY 278

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +   +L          N L A+ +     D+ VE        +SP+   F+I  +   K 
Sbjct: 279 TYGSLL----------NYLCALSEMHSFLDLMVE------NGLSPDHHIFNIFFSAYAKC 322

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +D A+ +F +M Q G   NV  Y  LID LC   R++++     +M   G  P     
Sbjct: 323 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 382

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+   LC       A  LV +M  QG  P       LI  LC  G+ ME  R +  M  
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 442

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  PD   Y+  I G     R D A ++F  + + G  P  V YN ++ G C A R+ +
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 502

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTL 576
           A  LF EM+ KG+ P V TYN +++G  ++    +A      M+   SG+  D+ TY  +
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN--SGTKCDIYTYNII 560

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ++GLC +   D+A  ++  +  KG   N ITF  +I  L K  R   A+  F  +   G+
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620

Query: 637 KPDMFVFVALISAFLSE 653
            P++  +  +    + E
Sbjct: 621 VPNVVTYRLVAENLIEE 637



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 233/503 (46%), Gaps = 29/503 (5%)

Query: 157 LIERM-DDCNIRL--NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           L  RM  +C+I++  N  T+ +LI    +  R+  +   F  + K+G+  +  + + ++ 
Sbjct: 82  LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141

Query: 214 GLCKNKQLEMALQ-LYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWED--R 267
           GLC  K++  A+  L   M   G TPD   + IL K   + +   E   L++ +  D  R
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR 201

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 +   +++  L      D+A  + Q MI      D GV+          PN  ++
Sbjct: 202 SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI------DNGVK----------PNNDTY 245

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +I+  L  GK    + +  +M+  G   + + Y +L++ LC    L E +  L  M E
Sbjct: 246 NCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVE 302

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           +G  P H   N  F    +   +  A+++  KMR  G  P V +   LI  LCK G+  +
Sbjct: 303 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 362

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M+ EG  P+IV +++ + GL  + + + A EL  ++   G CP+ V +N +I 
Sbjct: 363 AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLIC 422

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            LC   RV E   L + M   G+ P   +Y  LI+G+C +G  D+A      M+     S
Sbjct: 423 NLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI-GLS 481

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P  +TY TL+ G C A R DDA  L+ EM  KG  P  +T+  ++ GL +  R   A   
Sbjct: 482 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 541

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           +  M   G K D++ +  +++  
Sbjct: 542 YLNMINSGTKCDIYTYNIILNGL 564



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 238/551 (43%), Gaps = 55/551 (9%)

Query: 14  LRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           LR++A D  +S C  +      +I  L    L + A  +F Q+   G+  PNN +YNCL+
Sbjct: 192 LRMMANDHGRS-CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGV-KPNNDTYNCLI 249

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
                      V   L++M   G   D YT   LL   C      +  S  + ++++G  
Sbjct: 250 HGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLS 306

Query: 134 -DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
            D H+F+I   A++K G +DKA ++  +M    +  N   +  LI    K  RVD A   
Sbjct: 307 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F++M   G   +  +++ ++ GLC   + E A +L  EM   GI P+    +        
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN-------- 418

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                               TL+CN     L + G + +   L+  M        VGV  
Sbjct: 419 --------------------TLICN-----LCNVGRVMEGRRLIDLM------EHVGVR- 446

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    P+  S+  +I+     G+ D A  +F  M  IG       YN L+ G C++
Sbjct: 447 ---------PDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           +R++++Y L REM   G  P   T N++   L + +    A  L   M   G +  +   
Sbjct: 498 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 557

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +++  LCK     EAF+    +  +G   +I+ ++  IG L+   R + A++LF  I A
Sbjct: 558 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPA 617

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           +G  P+VV Y ++   L +   + E + LF+ M   G  P+    N L+      G+I +
Sbjct: 618 NGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 677

Query: 553 AMLCLSRMLEK 563
           A   LS++ E+
Sbjct: 678 AGAYLSKLDER 688



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 52/225 (23%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE-----------DLFNEMITK 528
           +D AL+LF ++  H     VVA+N I++ + +A R +               LFN M+ +
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89

Query: 529 GLI---PSVATYNLLI---------------------NGW--------------CKSGNI 550
             I   P+  TY++LI                      GW              C    +
Sbjct: 90  CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE---KGCAPNRIT 607
            +AM  L + + +   +PD ++Y+ L+ G C   R ++A+ L   M     + C PN +T
Sbjct: 150 GEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT 209

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +  +I GLCK      A   F+ M + G+KP+   +  LI  +LS
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS 254


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 227/516 (43%), Gaps = 50/516 (9%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VD A     RM   N R +   F   +  F KK +    + L ++M       +    ++
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I  LC+   ++ ++ +  +M   GI PD    + LI                       
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALING--------------------- 172

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
               LCN         G I +A  L   M+K               +G   PN  S+  +
Sbjct: 173 ----LCNE--------GKIKEAVELFNEMVK---------------RGH-EPNVISYTTV 204

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN L K G   +A+ +F++M Q GC  NV  Y+ +ID LC    + ++ E L EM E G 
Sbjct: 205 INGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P  FT NS+    C    +  A  L ++M  +   P     T+L+  LCK G   EA  
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARL 324

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M ++G  PDI  Y+A + G    + ++ A ++F  +   GC P   +YNI+I+G C
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K++R+ EA+ L  EM  K L P   TY+ L+ G C+ G   +A+     M       P++
Sbjct: 385 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY-GPHPNL 443

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY  L+DG C  G  D+A+ L   M+EK   PN + +  LI G+    +   A   F  
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   G +PD+  +  +I   L E     A+++ ++M
Sbjct: 504 LFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 227/490 (46%), Gaps = 19/490 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F   L +F+K  +      L  +MD   +  N  +  +LI+   + + VD ++ +  KM 
Sbjct: 96  FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G   DA  ++ +I GLC   +++ A++L++EM   G  P+    + +I      G  +
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215

Query: 258 LLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
           + V   +  E        +  ++I+  L  +  ++ A   L  M++              
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE-------------- 261

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +G + PN  +++ I++     G+L+ A  LF+EM     M N   +  L+DGLC    +
Sbjct: 262 -RG-IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMV 319

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+  +   M E G +P   T N++    C ++ +  A  +   M  +G  P      +L
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   CK  +  EA   L +M  +   PD V YS  + GL  + R   AL LF+++C++G 
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP 439

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++V Y I++ G CK   + EA  L   M  K L P++  Y +LI G   +G ++ A  
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKE 499

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             S++   +   PD+ TYT +I GL   G  D+A  L+ +ME+ G  PN  ++  +I G 
Sbjct: 500 LFSKLF-GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558

Query: 616 CKCDRPRAAL 625
            +      A+
Sbjct: 559 LQNQDSSTAI 568



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 240/519 (46%), Gaps = 22/519 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +   L +  K      V     +M  +   ++ Y+L  L+   C     D ++SV
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++   G   D   F+ L+      G++ +A EL   M       N  ++  +I+G  K
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A+ +F KM ++G   +   Y  II  LCK++ +  A++  SEM   GI P+   
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 243 LSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + ++    + G+L   T L KE+   RDV   T+    ++  L   G + +A  + + M
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMV-GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                  + GVE          P+ S+++ +++       ++ A  +F  M + GC    
Sbjct: 330 ------TEKGVE----------PDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G C S R++E+  LL EM      P   T +++ + LC+      ALNL ++
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +    +L+   CKHG   EA + L  M ++   P+IV Y+  I G+    +
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +++A ELF  +   G  PD+  Y ++I GL K     EA DLF +M   G +P+  +YN+
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +I G+ ++ +   A+  +  M+ K   S ++ T+  L+D
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRF-SVNLSTFQMLLD 591



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 191/392 (48%), Gaps = 28/392 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G    A  +F ++++ G C PN  +Y+ ++++LCK   V+     L EM + 
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNG-CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER 262

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + +T   ++  +CN GQ ++A  +F E++    +   V F+IL+    K G V +A
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M +  +  +  T+  L+ G+  +  +++A ++F+ M + G A  A  Y+++I G
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILING 382

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEI---WEDRD 268
            CK+++++ A  L +EM    + PD    S L+      G   E   L KE+       +
Sbjct: 383 YCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           + T  +L +   +    +G +D+A  LL++M + +                + PN   + 
Sbjct: 443 LVTYVILLDGFCK----HGHLDEALKLLKSMKEKK----------------LEPNIVHYT 482

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I  +   GKL++A  LF ++   G   ++  Y  +I GL      +E+Y+L R+ME+ 
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           GF P   + N M +   + QD   A+ L+ +M
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 154/603 (25%), Positives = 270/603 (44%), Gaps = 22/603 (3%)

Query: 52   LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
            LF ++  +G+C PN  ++N L+  LC   ++      LK+M++ G+     T   LL  Y
Sbjct: 971  LFREMSDKGIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 1029

Query: 112  CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
            C  G++  A+ + + +I  G   D   +++ +          KA  L+++M    I  NE
Sbjct: 1030 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 1089

Query: 171  KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             T+  LI+GFVK+ ++  A Q+F++M+K   + +   Y+ +IGG C     E AL+L   
Sbjct: 1090 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 1149

Query: 231  MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNG 287
            M+ +G+  +      L+       +  L  K + E   VN M    +    ++  L  NG
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFEL-AKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208

Query: 288  SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
             +D+A  L+  M                +K  V+P+  ++  +IN   + G +  A  + 
Sbjct: 1209 MLDEAVQLVGNM----------------YKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252

Query: 348  REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
              M + G + N  +Y+ LI   C    + E+ ++   M  +G    HFT N +   LCR 
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312

Query: 408  QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
              +  A   +  M   G  P       +I      G  + AF F  DM++ G  P    Y
Sbjct: 1313 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 1372

Query: 468  SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             + + GL     +  A +    +       D V YN +++  CK+  + EA  LF++M+ 
Sbjct: 1373 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 1432

Query: 528  KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
              ++P   TY+ L+ G C+ G    A+      + + +  P+ + YT L+DGL  AG P 
Sbjct: 1433 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 1492

Query: 588  DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             A   + EM +KG  P+ + F A+I    +  +   A   F  M+  G+ P++  +  L+
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 1552

Query: 648  SAF 650
              F
Sbjct: 1553 HGF 1555



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 263/611 (43%), Gaps = 106/611 (17%)

Query: 137  VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            VF +L+  + K G +D A E  E +     + +  T  +++   VK  R +    LF +M
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 197  TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +  G   +   ++++I GLC    L+ A  L  +M+ +G  P     + L+     +G  
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 257  TLLVKEI------WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
               ++ I        + DV T  +  ++    L +N    +AY LL+ M K         
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDN----LCTNHRSAKAYLLLKKMRK--------- 1082

Query: 311  EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            EM       +SPN  +++ +IN  +K+GK+ +A  +F EM++     N   YN LI G C
Sbjct: 1083 EM-------ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 1135

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ----GHE 426
            +    EE+  LL  ME +G +    T  ++   LC+ +    A  L+ +MRV     GH 
Sbjct: 1136 HVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 1195

Query: 427  PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE- 485
             +    T+LI  LCK+G   EA + + +M ++G  PD++ YS+ I G   +  +  A E 
Sbjct: 1196 AY----TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEI 1251

Query: 486  ------------------LFRDICAHGCC----------------PDVVAYNIIISGLCK 511
                              L  + C HG                   D    N+++S LC+
Sbjct: 1252 ICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCR 1311

Query: 512  AQRVAEAEDLFNEMITKGLIPSVATYNLLINGW--------------------------- 544
              ++ EAE     M   GL+P+  TY+ +ING+                           
Sbjct: 1312 DGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT 1371

Query: 545  --------CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
                    CK GN+ +A   L+R L    G+ D + Y TL+   C +G   +A+ L+++M
Sbjct: 1372 YGSLLKGLCKGGNLVEAKKFLNR-LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 1430

Query: 597  EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG-MKPDMFVFVALISAFLSELN 655
             +    P+  T+ +L+TGLC+  +   A+  F     +G + P+  ++  L+       +
Sbjct: 1431 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490

Query: 656  PPLAFEVLKEM 666
            P  AF   +EM
Sbjct: 1491 PKAAFYFFEEM 1501



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 188/381 (49%), Gaps = 4/381 (1%)

Query: 288  SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDLALS 345
            SI   ++LL  +   E + D  VE   +  G V   P+  + ++I+ +++KD + +L  S
Sbjct: 912  SIPSVFDLLIRVYLKEGMIDYAVETFELV-GLVGFKPSVYTCNMILASMVKDKRTELVWS 970

Query: 346  LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
            LFREM+  G   NV  +N LI+GLC    L+++  LL++MEE+GF PT  T N++    C
Sbjct: 971  LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030

Query: 406  RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            ++     A+ L+  M  +G E  V    + I  LC + ++ +A+  L  M +E   P+ V
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 466  CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             Y+  I G +   ++ +A ++F ++      P+ V YN +I G C      EA  L + M
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150

Query: 526  ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
               GL  +  TY  L+NG CK    + A   L RM   +      I YT LIDGLC  G 
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH-IAYTVLIDGLCKNGM 1209

Query: 586  PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             D+A+ L   M + G  P+ IT+ +LI G C+    ++A      M   G+  +  ++  
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 1269

Query: 646  LISAFLSELNPPLAFEVLKEM 666
            LI  F    N   A +V   M
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVM 1290



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 273/636 (42%), Gaps = 35/636 (5%)

Query: 43   VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ--DYGWGYD 100
            VG  EEA  L D ++  GL + N  +Y  LL  LCK    +L +  L+ M+  D   G+ 
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRL-NEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHI 1195

Query: 101  KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
             YT+  L+   C +G  D+A+ +   +   G   D   +S L+  F + G +  A E+I 
Sbjct: 1196 AYTV--LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 1253

Query: 160  RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            RM    + LN+  +  LI+ F +   V +A++++  M  +G  +D    +V++  LC++ 
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 1313

Query: 220  QLEMALQLYSEMKGSGITPD--------------------FEILSKLITSCSDEGELTL- 258
            +L  A +    M   G+ P+                    F     +I         T  
Sbjct: 1314 KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 1373

Query: 259  -LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA-YN-LLQAMIKGEPIADVGVEMLMI 315
             L+K + +  ++       N +  I    G++D   YN LL    K   + +       +
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYI---PGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 1430

Query: 316  FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM-QNVFLYNNLIDGLCNSNR 374
             +  V P++ ++  ++  L + GK   A+ LF      G +  N  +Y  L+DGL  +  
Sbjct: 1431 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490

Query: 375  LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
             + ++    EM + G  P     N++     RR  ++ A +    MR  G  P +    +
Sbjct: 1491 PKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNI 1550

Query: 435  LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            L+    K    +      + M++EG  PD + + + I GL      DL ++L   +   G
Sbjct: 1551 LLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 1610

Query: 495  CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
               D   +NI+I+   ++ ++ +A DL N M T G+ P   TYN + NG  K     ++ 
Sbjct: 1611 TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFREST 1670

Query: 555  LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            + L  MLE     P    Y TLI+G+C  G    A  L +EME  G   + +   A++ G
Sbjct: 1671 VVLHEMLEN-GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729

Query: 615  LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  C +   A++    M    + P +  F  L+  F
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRF 1765



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 138/591 (23%), Positives = 246/591 (41%), Gaps = 75/591 (12%)

Query: 24   SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
            SR  + P ++ +  +I   GS+G    A   FD + + G   P+ ++Y  LL+ LCK  +
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ-HPSFFTYGSLLKGLCKGGN 1384

Query: 82   VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSI 140
            +   +  L  +       D      LL   C SG   +A+++F++++ +  + D + +S 
Sbjct: 1385 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 1444

Query: 141  LLVAFSKWGE-VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            LL    + G+ V   C     M    +  N   +  L+ G  K      A   F++M K 
Sbjct: 1445 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 1504

Query: 200  GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--- 256
            G   D   ++ II    +  Q+  A   +S M+  G+ P+    + L+   S +  L   
Sbjct: 1505 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 1564

Query: 257  -----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                 T++ + I+ D+      L  +S++  L  +G                 I D+GV+
Sbjct: 1565 LSLYSTMMREGIFPDK------LTFHSLILGLSKSG-----------------IPDLGVK 1601

Query: 312  ML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
            +L  MI +GT++ +  +F+I+IN   + GK+  A  L   M  +G   +   YN++ +GL
Sbjct: 1602 LLGKMIMEGTLA-DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660

Query: 370  CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
               +   ES  +L EM E+G  P H    ++   +CR  D+ G                 
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG----------------- 1703

Query: 430  KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                              AF+   +M   GF    V  SA + GL+   + + A+ +   
Sbjct: 1704 ------------------AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 1745

Query: 490  ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
            +      P +  +  ++   C+  ++AEA  L   M   GL   V  YN+LI G C +G+
Sbjct: 1746 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1805

Query: 550  IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
               A      M  ++   P++ TY  L+D +  A        L  +++E+G
Sbjct: 1806 SAAAFELYEEMRHRDL-CPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 140/605 (23%), Positives = 246/605 (40%), Gaps = 29/605 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI     VG ++ A  +  ++ R GL V N   Y+ L+   C+  +V         M   
Sbjct: 1235 LINGFCRVGNIKSAKEIICRMYRSGL-VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 1293

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G G D +T   L+   C  G+  +A      +   G V   + +  ++  +   G+   A
Sbjct: 1294 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 1353

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
                + M  C    +  T+  L+ G  K   + +A +  +++     A D+ MY+ ++  
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             CK+  L  A+ L+ +M  + + PD    S L+T    +G+    V        +   TL
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV--CLFGTAMGRGTL 1471

Query: 275  LCNSIMRI-----LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI-------------- 315
              N +M       L   G    A+   + M+K     D      +I              
Sbjct: 1472 FPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAND 1531

Query: 316  FKGT-----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            F  T     V PN ++++I+++   K   L   LSL+  M + G   +   +++LI GL 
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 1591

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             S   +   +LL +M   G     FT N +         +  A +LV  M   G  P   
Sbjct: 1592 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 1651

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                +   L K     E+   L +M++ G +P    Y   I G+  +  +  A +L  ++
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             A G     VA + ++ GL    +  +A  + + M+   L+P++AT+  L++ +C+   I
Sbjct: 1712 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 1771

Query: 551  DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             +A L L  ++E      DV+ Y  LI G+C  G    A  L+ EM  +   PN  T+  
Sbjct: 1772 AEA-LKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1830

Query: 611  LITGL 615
            L+  +
Sbjct: 1831 LVDAI 1835



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 162/397 (40%), Gaps = 51/397 (12%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G + +AN  F  ++  G+C PN  +YN LL    K  ++         M   G   DK T
Sbjct: 1524 GQMMKANDFFSTMRWWGVC-PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 1582

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
               L+     SG  D  + +  ++I  G + D+  F+IL+  +S+ G++ KA +L+  M+
Sbjct: 1583 FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 1642

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +  +  T+  + +G  KKS   ++  +  +M ++G     A Y  +I G+C+   ++
Sbjct: 1643 TLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQ 1702

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
             A +L  EM+  G                          E+ E           ++++R 
Sbjct: 1703 GAFKLKDEMEALGFGS----------------------HEVAE-----------SAMVRG 1729

Query: 283  LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
            L+  G  + A  +L  M++   +                P  ++F  +++   +D K+  
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLL----------------PTIATFTTLMHRFCRDAKIAE 1773

Query: 343  ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
            AL L   M   G   +V  YN LI G+C +     ++EL  EM      P   T   +  
Sbjct: 1774 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1833

Query: 403  CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             +    +++    L+  ++ +G   W      L KEL
Sbjct: 1834 AISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKEL 1870


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 179/677 (26%), Positives = 279/677 (41%), Gaps = 91/677 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR L  +  +  A  +  Q++  G C  N   YN L++ LCK   V       K++   
Sbjct: 233 VIRSLCELKDLSRAKEMIVQMEATG-CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               D  T   L+   C   +F+  L + +E++   +   E   S L+    K G+V++A
Sbjct: 292 ELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEA 351

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++R+ +  +  N   +  LI    K    D+A  LFD+M K G   +   Y ++I  
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDM 411

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
            C+  +L+ AL    EM   G+ P     + LI      G+++     + E  ++ +   
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT 471

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +   S+M    S G I++A  L   M                 KG V P+  +F  +++
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTG---------------KGIV-PSIYTFTTLLS 515

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L + G +  A+ LF EM +     N   YN +I+G C    + +++E L EM E G  P
Sbjct: 516 GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVP 575

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             ++   +   LC       A   V  +     E      T L+   C+ GK  EA    
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI---------------------- 490
            DM   G   D+VCY   I G +  K   + L L +++                      
Sbjct: 636 QDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695

Query: 491 -------------CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------------ 525
                           GC P+ V Y  +I+GLCKA  V EAE L ++M            
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTY 755

Query: 526 -----------------------ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                                  I KGL+ + ATYN+LI G+C+ G +++A   ++RM+ 
Sbjct: 756 GCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMI- 814

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            +  SPD ITYTT+I  LC       AI LWN M EKG  P+R+ +  LI G C      
Sbjct: 815 GDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874

Query: 623 AALVHFRMMKEKGMKPD 639
            A      M  +G+KP+
Sbjct: 875 KATELRNEMLRQGLKPN 891



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 239/497 (48%), Gaps = 17/497 (3%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           +T   L+HG VK      A++LFD M   G   D  +Y  +I  LC+ K L  A ++  +
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQ 252

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M+ +G   +    + LI     +       +++WE   +    L    +   +V+  ++ 
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKK-------QKVWEAVGIKK-DLAGKELKPDVVTYCTLV 304

Query: 291 QAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                +Q         +VG+EM+  + +   SP+ ++   ++  L K GK++ AL+L + 
Sbjct: 305 CGLCKVQEF-------EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKR 357

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           + + G   N+F+YN LID LC     +E+  L   M + G  P   T + +    CRR  
Sbjct: 358 VAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGK 417

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL+ + +M   G +P V     LI   CK G    A   + +M+ +   P +V Y++
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTS 477

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +GG     +++ AL L+ ++   G  P +  +  ++SGL +A  + +A  LF EM    
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+  TYN++I G+C+ GN+ +A   L+ M+EK    PD  +Y  LI GLC+ G+  +A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK-GIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +  + + +  C  N I +  L+ G C+  +   AL   + M  +G+  D+  +  LI  
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 650 FLSELNPPLAFEVLKEM 666
            L   +  +   +LKEM
Sbjct: 657 SLKHKDRKVFLGLLKEM 673



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 193/408 (47%), Gaps = 37/408 (9%)

Query: 295 LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L+Q  ++   + D V V  +M+ K ++ P   +   +++ L+K     LA+ LF +M  +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V++Y  +I  LC    L  + E++ +ME +G        N +   LC++Q V  A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           + + + +  +  +P V     L+  LCK  +       + +M++  F P     S+ + G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN---------- 523
           L    +V+ AL L + +   G  P++  YN +I  LCK +   EAE LF+          
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401

Query: 524 -------------------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
                                    EMI  GL PSV  YN LING CK G+I  A   ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M+ K+   P V+TYT+L+ G C  G+ + A+ L++EM  KG  P+  TF  L++GL + 
Sbjct: 462 EMINKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRA 520

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R A+  F  M E  +KP+   +  +I  +  E N   AFE L EM
Sbjct: 521 GLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/600 (24%), Positives = 258/600 (43%), Gaps = 58/600 (9%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +  ++++ R   S  A+  L+  L   G VEEA  L  +V   G+  PN + YN L+++L
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVS-PNIFVYNALIDSL 377

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE- 135
           CK  + D  E+    M   G   +  T + L+ ++C  G+ D ALS   E+ID G     
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++ L+    K+G++  A  L+  M +  +     T+  L+ G+  K +++KAL+L+ +
Sbjct: 438 YPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           MT  G       +  ++ GL +   +  A++L++EM    + P+    + +I    +EG 
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEM 312
           ++   + + E                 ++  G +   Y+   L+  +      ++  V +
Sbjct: 558 MSKAFEFLNE-----------------MIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
             + KG    N   +  +++   ++GKL+ ALS+ ++M   G   ++  Y  LIDG    
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKH 660

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
              +    LL+EM + G KP      SM     +  D   A  +   M  +G  P     
Sbjct: 661 KDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 433 TLLIKELCKHGKAMEAFRFLTDM-----------------------------------VQ 457
           T +I  LCK G   EA    + M                                   + 
Sbjct: 721 TAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL 780

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G L +   Y+  I G     R++ A EL   +   G  PD + Y  +IS LC+   V +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKK 840

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +L+N M  KG+ P    YN LI+G C +G + +A    + ML ++   P+  T  T I
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML-RQGLKPNTETSETTI 899



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 2/217 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I      G  +EA  ++D +  EG CVPN  +Y  ++  LCK+  V+  E+   +M+  
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPG 746

Query: 96  GWGYDKYTLTPLLQVYCNS-GQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
               ++ T    L +     G   KA+ + N I+     +   +++L+  F + G +++A
Sbjct: 747 NSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEA 806

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ELI RM    +  +  T+  +I    +++ V KA++L++ MT+ G   D   Y+ +I G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
            C   ++  A +L +EM   G+ P+ E     I++ S
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDS 903


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 180/335 (53%), Gaps = 1/335 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +FK  + P   +F+ +++ L    K+  A+ LF EM ++G   +V  Y+ +I+GLC    
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              + +LL++MEE G KP     N++   LC+ + V  A++   +M  +G  P V   + 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++   C  G+  EA      MV+   +P+ V ++  I GL   + +  A  +F  +   G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDV  YN ++ G C   ++ EA+ LFN M  KG  P+V +YN+LING CKSG ID+A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L+ M  K S +PD+ TY+TL+ G C  GRP +A  L  EM   G  PN IT+  ++ G
Sbjct: 241 GLLAEMSHK-SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           LCK      A    + M+E  ++P++F++  LI  
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 216/479 (45%), Gaps = 58/479 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  L+ G   K+++  A++LFD+M K G   D   Y  II GLCK     MALQL  +M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           +  G  P+                                  +  N+I+  L  +  + +
Sbjct: 72  EEKGCKPN---------------------------------VVAYNTIIDSLCKDRLVTE 98

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A +    M+K                  + P+  ++  I++     G+++ A SLF++M 
Sbjct: 99  AMDFFSEMVKE----------------GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMV 142

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +   + N   +  LIDGLC    + E++ +   M E G +P  +T N++    C R  + 
Sbjct: 143 ERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMD 202

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   M  +G  P V+   +LI   CK G+  EA   L +M  +   PDI  YS  +
Sbjct: 203 EAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLM 262

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   + R   A EL +++C++G  P+++ Y+I++ GLCK   + EA +L   M    + 
Sbjct: 263 RGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P++  Y +LI G C  G ++ A    S +  K    P V+TYT +I GL   G  ++A  
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVK-GIQPTVVTYTVMISGLLKGGLSNEACE 381

Query: 592 LWNEMEEKGCAPNRITFMALITGLCK-CDRPRAALVHFRMMKE---KGMKPDMFVFVAL 646
           L+ EM   GC PN  T+  +I G  +  D P A     R+++E   KG   D   F  L
Sbjct: 382 LFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV----RLIEEMVGKGFSADSSTFRML 436



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 173/317 (54%), Gaps = 1/317 (0%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M ++G    +  +N L+ GLC+  ++ ++ +L  EM + G +P   T +++   LC+  +
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              AL L++KM  +G +P V     +I  LCK     EA  F ++MV+EG  PD+  YS+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + G  ++ RV+ A  LF+ +      P+ V + I+I GLCK + ++EA  +F  M  KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P V TYN L++G+C    +D+A   L  +++++  +P+V +Y  LI+G C +GR D+A
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQK-LFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L  EM  K   P+  T+  L+ G C+  RP+ A    + M   G+ P++  +  ++  
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 650 FLSELNPPLAFEVLKEM 666
                +   AFE+LK M
Sbjct: 300 LCKHGHLDEAFELLKAM 316



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 201/425 (47%), Gaps = 52/425 (12%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+++  L S   I  A  L   M+K      +G E          P+  ++  IIN L K
Sbjct: 14  NTLLSGLCSKAKIMDAVKLFDEMVK------MGHE----------PDVITYSTIINGLCK 57

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G   +AL L ++M + GC  NV  YN +ID LC    + E+ +   EM + G  P  FT
Sbjct: 58  MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            +S+    C    V  A +L ++M  +   P     T+LI  LCK     EA+     M 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV- 515
           ++G  PD+  Y+A + G     ++D A +LF  +   GC P+V +YNI+I+G CK+ R+ 
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 516 ----------------------------------AEAEDLFNEMITKGLIPSVATYNLLI 541
                                              EA++L  EM + GL+P++ TY++++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G CK G++D+A   L  M E +   P++  YT LI+G+C  G+ + A  L++ +  KG 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKI-EPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P  +T+  +I+GL K      A   FR M   G  P+   +  +I  FL   + P A  
Sbjct: 357 QPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416

Query: 662 VLKEM 666
           +++EM
Sbjct: 417 LIEEM 421



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 207/471 (43%), Gaps = 51/471 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L S   + +A  LFD++ + G   P+  +Y+ ++  LCK  +  +    LK+M++ 
Sbjct: 16  LLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMALQLLKKMEEK 74

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +      ++   C      +A+  F+E++  G   D   +S +L  F   G V++A
Sbjct: 75  GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEA 134

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L ++M + N+  N+ TF +LI G  KK  + +A  +F+ MT+ G   D   Y+ ++ G
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   Q++ A +L++ M   G  P                             +V +  +
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAP-----------------------------NVRSYNI 225

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L N   +    +G ID+A  LL  M                   +++P+  ++  ++   
Sbjct: 226 LINGHCK----SGRIDEAKGLLAEMS----------------HKSLTPDIFTYSTLMRGF 265

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G+   A  L +EM   G + N+  Y+ ++DGLC    L+E++ELL+ M+ES  +P  
Sbjct: 266 CQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNI 325

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           F    +   +C    +  A  L   + V+G +P V   T++I  L K G + EA     +
Sbjct: 326 FIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFRE 385

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           M   G LP+   Y+  I G +       A+ L  ++   G   D   + ++
Sbjct: 386 MAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 40/243 (16%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  LF+ + R+G C PN  SYN L+   CKS  +D  +  L EM       D +T +
Sbjct: 201 MDEAQKLFNIMDRKG-CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYS 259

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L++ +C  G+  +A  +  E+  +G +   + +SI+L    K G +D+A EL++ M + 
Sbjct: 260 TLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQES 319

Query: 165 NIRLN-----------------------------------EKTFCVLIHGFVKKSRVDKA 189
            I  N                                     T+ V+I G +K    ++A
Sbjct: 320 KIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEA 379

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKL 246
            +LF +M  +G   ++  Y+VII G  +N     A++L  EM G G + D   F +LS L
Sbjct: 380 CELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL 439

Query: 247 ITS 249
            +S
Sbjct: 440 ESS 442


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/610 (25%), Positives = 274/610 (44%), Gaps = 77/610 (12%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S  A   L+    S G   +A   F ++  E    P  + YN +L+AL  S  + L    
Sbjct: 136 SSSAFAALVAAHSSAGRHADAVQAFSRMD-EFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
              M   G   ++ T   L+   C  G    AL +F+E++D G + +  ++++LL +   
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++D+A +L+  M D     +E T+   + G  K  RV++A Q    +   GFA     
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWE 265
           Y  +I GL + ++ +     Y  M    I+PD  + + +I  C++ G +   L   ++ +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +     T   N+++++L  +G +++A+ L   M++   + D   + +MI          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICG-------- 426

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
                   L K G +D A+ +F EM + GC   V  YN LIDG     RLEE+  L  +M
Sbjct: 427 --------LCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G  P+ F            +  +GA       +V+  E   K    L+ ++C+ G+ 
Sbjct: 479 -EMGNNPSLFL-----------RLTLGA------NQVRDSESLRK----LVHDMCQSGQV 516

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           ++A++ L  ++  G +PD+V Y+  I GL   + +D A+ LF+++   G  PD + Y  +
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRM---- 560
           I GL +A R  +A  LF  ++  G  PS++ YN ++   C+   + QA+ L L  +    
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKY 636

Query: 561 ------------------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
                                         +++E GS     YT  + GLC   R DDA+
Sbjct: 637 NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDAL 696

Query: 591 MLWNEMEEKG 600
            +++ ++E G
Sbjct: 697 RIFHTLQEFG 706



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 236/497 (47%), Gaps = 34/497 (6%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+ A S  G    A +   RMD+   R     +  ++   V    +  AL L+++M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A + A Y+V++ GLCK      AL+++ EM   GI P+ +I + L++S  + G++
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 257 TLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              V+ +   +D   +   +  N+ +  L   G +++A+                  ++M
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ----------------RLVM 302

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +  G  +     +  +I+ L +  + D     ++ M +     +V LY  +I G   + R
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E++   L  M++ GF P  F  N++ + LC   D+  A  L  +M            T+
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK G   EA +   +M + G  P ++ Y+A I G     R++ A  LF  +   G
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMG 481

Query: 495 CCP--------------DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             P              D  +   ++  +C++ +V +A  L   +I  G++P V TYN L
Sbjct: 482 NNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ING CK+ N+D A+  L + L+ +  SPD ITY TLIDGL  A R +DA+ML+  + + G
Sbjct: 542 INGLCKARNLDGAVR-LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600

Query: 601 CAPNRITFMALITGLCK 617
            +P+   + +++  LC+
Sbjct: 601 SSPSLSIYNSMMRSLCR 617



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 219/506 (43%), Gaps = 100/506 (19%)

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSN 286
           ++ + +G+       + L+ + S  G     V+     ++        + N+I++ LV +
Sbjct: 126 ADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDS 185

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I  A  L   M+                    +PN ++++++++ L K G    AL +
Sbjct: 186 GVILLALALYNRMVAA----------------GCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM   G M NV +Y  L+  LCN+ +++E+ +LL  M++ G  P   T N+    LC+
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 407 -------------RQDVVGALNL----------------------VRKMRVQGHEPWVKH 431
                         QD   AL L                       + M  +   P V  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T++I+   + G+  +A  FL  M ++GF+PD  CY+  +  L D   ++ A  L  ++ 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +    D     I+I GLCK   V EA  +F+EM   G  P+V TYN LI+G+ + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 552 QAMLCLSRM------------------------LEK------ESGS-------------- 567
           +A +   +M                        L K      +SG               
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 568 ---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PDV+TY TLI+GLC A   D A+ L+ E++ KG +P+ IT+  LI GL +  R   A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
           ++ F+ + + G  P + ++ +++ + 
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 193/432 (44%), Gaps = 47/432 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR     G +E+A    D +K++G  VP+ + YN +L+ LC    ++       EM   
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGF-VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
               D  T T ++   C  G  D+A+ +F+E+ +HG  D  V  ++ L+  F + G +++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEE 470

Query: 154 ACELIERMDDCN-----IRL--------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           A  L  +M+  N     +RL        + ++   L+H   +  +V KA +L   +  SG
Sbjct: 471 ARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG 530

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELT 257
              D   Y+ +I GLCK + L+ A++L+ E++  GI+PD      LI        E +  
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL--------LQAMIKGEPIA--- 306
           +L + I +     ++++  NS+MR L     + QA NL            ++ E +A   
Sbjct: 591 MLFQNILQSGSSPSLSIY-NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 307 --------DVGV-EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                   D GV E++ I +   S +++ + I +  L +  + D AL +F  + + G   
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDI 709

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQDVVGAL 414
                  LI+ LC    L  + +++          +    N + R LC   RRQD   A 
Sbjct: 710 TPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQD---AQ 766

Query: 415 NLVRKMRVQGHE 426
            L  +M + G++
Sbjct: 767 ALAWRMHLVGYD 778


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 176/658 (26%), Positives = 286/658 (43%), Gaps = 73/658 (11%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PL     DVV   CF                G+ ++A  LFD++    +  P+    +  
Sbjct: 174 PLDAWMFDVVMRACFKE--------------GMYDDAVRLFDEMPASEI-EPDQRVCSVA 218

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           + +LCK    +   + L++MQD G+    +T   ++ V    G+ ++AL + +E++  G 
Sbjct: 219 IASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK 278

Query: 133 VDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V  + L+  +    EV KA ++ E      +   + T+ VLI G  ++   +KA +
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L  +M   G       ++++I GL  +K  + A+ L+ EM  SGI PD    + LI    
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 252 DEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              ++   +  +WE   +  V    +  +S++     NG +D+A  L   M         
Sbjct: 398 QRRKIREALN-LWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG------- 449

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   KG  +PN  ++  ++   +     D A +L  EM Q G   N + YN LI+G
Sbjct: 450 --------KG-FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC   R+ E  E+L+  E  GF PT  T NS                             
Sbjct: 501 LCVVGRVCEVGEMLKRFETEGFVPTAMTYNS----------------------------- 531

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                 +I    K G    AF     M  +G  P+IV Y++ I G       DLAL++  
Sbjct: 532 ------IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+   G  PD+ AYN +I G C+   ++ A  +   M+  GL+P+++ YN  I G+    
Sbjct: 586 DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLK 645

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            +++A+    +M+ KE    D  TYTTLIDG    G    A+ L++EM  KG  P+ ITF
Sbjct: 646 MMEEALRLYEKMI-KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITF 704

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            AL  GLC+      A      M    ++P++ ++  LI+ +L       AF +  EM
Sbjct: 705 TALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 255/556 (45%), Gaps = 27/556 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP ++++N +++ L K   ++       E+   G        T L+  YC   +  KAL 
Sbjct: 244 VPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALD 303

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F E +  G V   V +++L+   ++ G  +KA EL  +M D  +  +   F ++I G +
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
                  A+ LF +M  SG   DA  Y+++I  LC+ +++  AL L+ +M  +G+ P   
Sbjct: 364 NDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIV 422

Query: 242 ILSKL-----ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               L     +  C DE  + L  +   +    N +T    ++M+  ++  + D+AY LL
Sbjct: 423 TYHSLLLCYCVNGCMDEA-VKLYTEMPGKGFTPNVVTY--TTLMKGHINKAAFDKAYALL 479

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M +                  VS N  +++ +IN L   G++     + +     G +
Sbjct: 480 AEMKQN----------------GVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV 523

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
                YN++I+G   +  +  ++ + ++M   G  P   T  S     C+      AL +
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  +R +G  P +     LI   C+ G    A + L  M+++G LP+I  Y++ I G  +
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +K ++ AL L+  +   G   D   Y  +I G  K   V  A  L++EM+ KG IP   T
Sbjct: 644 LKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           +  L +G C++G+ID A   L  M  +    P+V+ Y  LI+G    G+  +A  L +EM
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEM 762

Query: 597 EEKGCAPNRITFMALI 612
            E+   P+  T+  L+
Sbjct: 763 LERKIMPDDTTYDILV 778



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 232/477 (48%), Gaps = 23/477 (4%)

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD-- 252
           +M   G   DA M+DV++    K    + A++L+ EM  S I PD  + S  I S     
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVE 311
           +    LLV    +D          NS++ +LV  G +++A ++   ++  G+ ++ V   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 312 MLM--------------IFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            LM              IF+ T+     P   ++ ++I    ++G  + A  L R+M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + +   +N +I GL N    +++  L +EM +SG  P  FT N +   LC+R+ +  A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           LNL  KM   G +P++     L+   C +G   EA +  T+M  +GF P++V Y+  + G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            I+    D A  L  ++  +G   +   YN +I+GLC   RV E  ++     T+G +P+
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TYN +ING+ K+G +  A     +M  K    P+++TYT+ IDG C     D A+ + 
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAK-GIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           N++  KG  P+   + +LI G C+      AL    +M + G+ P++ V+ + I+ +
Sbjct: 585 NDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/577 (25%), Positives = 253/577 (43%), Gaps = 52/577 (9%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWG 149
           EM+  G   D +    +++     G +D A+ +F+E+       D+ V S+ + +  K  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           + ++A  ++ +M D      + TF  ++   VK  R+++AL + D++  +G      +  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            ++ G C  +++  AL ++ E    G+ P     + LI  C++EG               
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEG--------------- 331

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                               ++AY L + M       D G+           P+T+ F++
Sbjct: 332 ------------------MPEKAYELCRQM------RDHGL----------LPSTNEFNM 357

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  LL D     A+SLF+EM   G + + F YN LI  LC   ++ E+  L  +M E+G
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            KP   T +S+  C C    +  A+ L  +M  +G  P V   T L+K         +A+
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             L +M Q G   +   Y+  I GL  + RV    E+ +     G  P  + YN II+G 
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            KA  +  A  ++ +M  KG+ P++ TY   I+G+CK+   D A+  L+ +  K    PD
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK-GLRPD 595

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           +  Y +LI G C  G    A+ +   M + G  PN   + + ITG         AL  + 
Sbjct: 596 IAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYE 655

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M ++G+  D   +  LI  F  + N   A ++  EM
Sbjct: 656 KMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 188/450 (41%), Gaps = 27/450 (6%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S      +I+ L +  L ++A  LF ++   G  +P+ ++YN L+  LC+   +      
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNL 408

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            ++M + G      T   LL  YC +G  D+A+ ++ E+   G+    V ++ L+     
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               DKA  L+  M    +  N+ T+  LI+G     RV +  ++  +    GF   A  
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKE 262
           Y+ II G  K   +  A  +Y +M   GI P+    +  I     TSC D   L L +  
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD---LALKMLN 585

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
               + +       NS++      G++  A  +L                +++ K  + P
Sbjct: 586 DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL----------------VLMLKDGLLP 629

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N S ++  I        ++ AL L+ +M + G   +   Y  LIDG      +  + +L 
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM   G  P H T  ++   LCR  D+  A  L+ +M      P V    +LI    ++
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           GK  EAFR   +M++   +PD   Y   +G
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILVG 779


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 177/677 (26%), Positives = 281/677 (41%), Gaps = 91/677 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR L  +  +  A  +   ++  G C  N   YN L++ LCK   V       K++   
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATG-CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               D  T   L+   C   +F+  L + +E++   +   E   S L+    K G++++A
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++R+ D  +  N   +  LI    K  +  +A  LFD+M K G   +   Y ++I  
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
            C+  +L+ AL    EM  +G+       + LI      G+++     + E  ++ +   
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +   S+M    S G I++A  L   M  G+ IA               P+  +F  +++
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMT-GKGIA---------------PSIYTFTTLLS 515

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L + G +  A+ LF EM +     N   YN +I+G C    + +++E L+EM E G  P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             ++   +   LC       A   V  +     E      T L+   C+ GK  EA    
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI---------------------- 490
            +MVQ G   D+VCY   I G +  K   L   L +++                      
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695

Query: 491 -------------CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------------ 525
                           GC P+ V Y  +I+GLCKA  V EAE L ++M            
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755

Query: 526 -----------------------ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                                  I KGL+ + ATYN+LI G+C+ G I++A   ++RM+ 
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI- 814

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            +  SPD ITYTT+I+ LC       AI LWN M EKG  P+R+ +  LI G C      
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874

Query: 623 AALVHFRMMKEKGMKPD 639
            A      M  +G+ P+
Sbjct: 875 KATELRNEMLRQGLIPN 891



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 238/496 (47%), Gaps = 15/496 (3%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           +T   L+HG VK      A++LF+ M   G   D  +Y  +I  LC+ K L  A ++ + 
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M+ +G   +    + LI     +       +++WE   +    L    +   +V+  ++ 
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKK-------QKVWEAVGIKK-DLAGKDLKPDVVTYCTLV 304

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                +Q    G  + D   EML +     SP+ ++   ++  L K GK++ AL+L + +
Sbjct: 305 YGLCKVQEFEIGLEMMD---EMLCL---RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   N+F+YN LID LC   +  E+  L   M + G +P   T + +    CRR  +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL+ + +M   G +  V     LI   CK G    A  F+ +M+ +   P +V Y++ 
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +GG     +++ AL L+ ++   G  P +  +  ++SGL +A  + +A  LFNEM    +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+  TYN++I G+C+ G++ +A   L  M EK    PD  +Y  LI GLC+ G+  +A 
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +  + + +  C  N I +  L+ G C+  +   AL   + M ++G+  D+  +  LI   
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 651 LSELNPPLAFEVLKEM 666
           L   +  L F +LKEM
Sbjct: 658 LKHKDRKLFFGLLKEM 673



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 247/554 (44%), Gaps = 57/554 (10%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           TL+ LL        F  A+ +FN+++  G   D ++++ ++ +  +  ++ +A E+I  M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           +     +N   + VLI G  KK +V +A+ +   +       D   Y  ++ GLCK ++ 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
           E+ L++  EM     +P    +S L+      G   E   LVK +  D  V+    + N+
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV-DFGVSPNLFVYNA 372

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L       +A  L   M K      +G+           PN  ++ I+I+   + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGK------IGLR----------PNDVTYSILIDMFCRRG 416

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           KLD ALS   EM   G   +V+ YN+LI+G C    +  +   + EM     +PT  T  
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C +  +  AL L  +M  +G  P +   T L+  L + G   +A +   +M + 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              P+ V Y+  I G  +   +  A E  +++   G  PD  +Y  +I GLC   + +EA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 519 EDLFNEMITKGLIP-SVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------S 565
           + +F + + KG    +   Y  L++G+C+ G +++A+     M+++              
Sbjct: 597 K-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655

Query: 566 GS----------------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           GS                      PD + YT++ID     G   +A  +W+ M  +GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 604 NRITFMALITGLCK 617
           N +T+ A+I GLCK
Sbjct: 716 NEVTYTAVINGLCK 729



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 193/408 (47%), Gaps = 37/408 (9%)

Query: 295 LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L+Q  ++   + D V V  +MI K ++ P   +   +++ L+K     LA+ LF +M  +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V++Y  +I  LC    L  + E++  ME +G        N +   LC++Q V  A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           + + + +  +  +P V     L+  LCK  +       + +M+   F P     S+ + G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN---------- 523
           L    +++ AL L + +   G  P++  YN +I  LCK ++  EAE LF+          
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 524 -------------------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
                                    EM+  GL  SV  YN LING CK G+I  A   ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M+ K+   P V+TYT+L+ G C  G+ + A+ L++EM  KG AP+  TF  L++GL + 
Sbjct: 462 EMINKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R A+  F  M E  +KP+   +  +I  +  E +   AFE LKEM
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 248/582 (42%), Gaps = 92/582 (15%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S  A+  L+  L   G +EEA  L  +V   G+  PN + YN L+++LCK       E+ 
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS-PNLFVYNALIDSLCKGRKFHEAELL 389

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
              M   G   +  T + L+ ++C  G+ D ALS   E++D G  +  + ++ L+    K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           +G++  A   +  M +  +     T+  L+ G+  K +++KAL+L+ +MT  G A     
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           +  ++ GL +   +  A++L++EM    + P+    + +I    +EG+++   + + E  
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE-- 567

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                          +   G +   Y+   L+  +      ++  V +  + KG    N 
Sbjct: 568 ---------------MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             +  +++   ++GKL+ ALS+ +EM Q G   ++  Y  LIDG       +  + LL+E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672

Query: 385 MEESGFK-----------------------------------PTHFTLNSMFRCLCRRQD 409
           M + G K                                   P   T  ++   LC+   
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732

Query: 410 VVGALNLVRKMR----------------------------VQGHEPWVK---HNT----L 434
           V  A  L  KM+                            V+ H   +K    NT    +
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI+  C+ G+  EA   +T M+ +G  PD + Y+  I  L     V  A+EL+  +   G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             PD VAYN +I G C A  + +A +L NEM+ +GLIP+  T
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 44/559 (7%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE-LIERMDDCNIRLNEKTFCV 175
           +KALS+ N    +G++   + ++ +L A  +  +  K  E + + M +  +  N  T+ +
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     ++  L  F +M ++G   +   Y+ II   CK +++  A +L   M   G
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 236 ITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           + P+    + +I     EG   E + +++E+ + R V       N+++    + G+  QA
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF-NTLINGYCNVGNFHQA 327

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   M+K                  +SPN  ++  +IN++ K G L+ A+    +M  
Sbjct: 328 LVLHAEMVKN----------------GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQD 409
            G   N   Y  LIDG      L+++Y++++EM E+GF PT  T N++    C   R +D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             G   L+++M  +G  P V   + +I   C++ +  +AF+   +MV +G  PD+  YS+
Sbjct: 432 ASG---LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I GL   +R+    +LF+++ + G  PD V Y  +I+  C    + +A  L +EMI KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID----------- 578
             P + TYN+LING+ K     +A   L ++L +ES  P+ ITY TLID           
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES-VPNEITYNTLIDNCNNLEFKSAL 607

Query: 579 ----GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
               G C+ G  ++A  +   M +KG   N   +  +I G  K      A   ++ M   
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P     +AL  +   E
Sbjct: 668 GFAPHSVTIMALAKSLYHE 686



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 269/581 (46%), Gaps = 39/581 (6%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS-CSVD 83
           +C  S      +++    V L+ +A  + +  K  G  +P   SYN +L+A+ ++  SV 
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGF-MPGVLSYNAILDAVIRTKQSVK 185

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL 142
           + E   KEM + G   + YT   L++ +C +G  +  L  F E+  +G +   V ++ ++
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTII 245

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            A+ K  ++ +A +L+  M    +  N  ++ V+I+G  ++ ++ +  ++ ++M+K  + 
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK- 261
            D   ++ +I G C       AL L++EM  +G++P+    + LI S    G L   ++ 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 262 -EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            +   DR ++       +++      G + QAY +++ M+                +   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV----------------ENGF 409

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P   +++ +IN     G+++ A  L +EM + G + +V  Y+ +I G C +  LE++++
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM   G  P   T +S+ + LC+++ +    +L ++M   G  P     T LI   C
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
             G   +A R   +M+Q+GF PDIV Y+  I G     R   A  L   +      P+ +
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 501 AYNIII---------------SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
            YN +I                G C    + EA+ +   M+ KG   +   YN++I+G  
Sbjct: 590 TYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHS 649

Query: 546 KSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGR 585
           K GNI++A      ML   SG +P  +T   L   L   G+
Sbjct: 650 KVGNIEKAYNLYKEML--HSGFAPHSVTIMALAKSLYHEGK 688



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 188/379 (49%), Gaps = 7/379 (1%)

Query: 292 AYN-LLQAMIKGEPIADV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +YN +L A+I+ +    +  G+   M+  G VSPN  +++I+I      G L++ L  F 
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMVESG-VSPNVYTYNILIRGFCTAGNLEMGLFFFG 227

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + GC+ NV  YN +ID  C   ++ E+++LLR M   G  P   + N +   LCR  
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287

Query: 409 DVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            +     ++ +M  + + P  V  NTL I   C  G   +A     +MV+ G  P++V Y
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTL-INGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I  +     ++ A+E    +   G  P+   Y  +I G  +   + +A  +  EM+ 
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  P++ TYN LING C  G ++ A   L  M+E+    PDV++Y+T+I G C     +
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQELE 465

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  L  EM  KG +P+  T+ +LI GLCK  R       F+ M   G+ PD   + +LI
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525

Query: 648 SAFLSELNPPLAFEVLKEM 666
           +A+  E +   A  +  EM
Sbjct: 526 NAYCIEGDLDKALRLHDEM 544



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 213/501 (42%), Gaps = 41/501 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  SYN ++  LC+   +      L+EM    +  D+ T   L+  YCN G F +AL +
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E++ +G     V ++ L+ +  K G +++A E +++M D  +  N +T+  LI GF +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  + +A Q+  +M ++GF      Y+ +I G C   ++E A  L  EM   G  PD   
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 243 LSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S +I+    + E E    +K     + ++      +S+++ L     + +  +L Q M+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 301 K-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
             G P                 P+  ++  +IN    +G LD AL L  EM Q G   ++
Sbjct: 511 SLGLP-----------------PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G    +R +E+  LL ++      P   T N++    C   +   AL     
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL----- 607

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
                          L+K  C  G   EA R L  M+Q+G+  +   Y+  I G   +  
Sbjct: 608 --------------ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A  L++++   G  P  V    +   L    +  E   L +  +    I   A   +
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKV 713

Query: 540 LINGWCKSGNIDQAMLCLSRM 560
           LI    K GN+D     L  M
Sbjct: 714 LIGINSKEGNMDAVFNVLKDM 734



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 138/264 (52%), Gaps = 3/264 (1%)

Query: 405 CRRQDVVG-ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME-AFRFLTDMVQEGFLP 462
           C R +++  AL++V   +  G  P V     ++  + +  ++++ A     +MV+ G  P
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++  Y+  I G      +++ L  F ++  +GC P+VV YN II   CK +++ EA  L 
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M  KGL P++ +YN++ING C+ G + +    L  M  K    PD +T+ TLI+G C 
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCN 320

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G    A++L  EM + G +PN +T+  LI  +CK      A+     M+++G+ P+   
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  LI  F  +     A++++KEM
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEM 404


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 274/568 (48%), Gaps = 49/568 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN L++ +CK    +     L  M   G   D+ T   L+     SG    AL V
Sbjct: 146 PNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEV 205

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEK-------TFCV 175
           F+E+ + G   + V +++++  F K G+  KA E+ ER+      L E+       ++ V
Sbjct: 206 FDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERL------LREELVFPSVVSYNV 259

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +I G  K  R  + L+++++M K+    D   Y  +I GL +   L  A ++Y EM G G
Sbjct: 260 MISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRG 319

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWED------RDVNTMTLLCNSIMRILVSNGSI 289
           + PD    + ++      G +     E+WE+      R+V +     N  ++ L  NG +
Sbjct: 320 VRPDVVTCNAMLNGLCKAGNVEECF-ELWEEMGKCSLRNVRSY----NIFLKGLFENGKV 374

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D A                    +M++ G +  +++++ ++++ L  +G ++ AL +  E
Sbjct: 375 DDA--------------------MMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEE 414

Query: 350 MT--QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
               + G   + F Y++LI+ LC   RL+E+  ++  M + G K      N +     + 
Sbjct: 415 AEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKH 474

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A+ + R+M  +G    V    +LI  L +  +  EA+  + +M+++G+ PDI+ Y
Sbjct: 475 SKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITY 534

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  IGGL +   +D AL L+      G  PD++ YNI+I  LC + +V +A  L++ +  
Sbjct: 535 STLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQ 594

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           K  + ++ T+N ++ G+ K GN + A    + +LE E   PD+I+Y   + GLC  GR  
Sbjct: 595 KKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDEL-QPDIISYNITLKGLCSCGRVT 652

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGL 615
           DA+   ++   +G  P  IT+  L+  +
Sbjct: 653 DAVGFLDDALVRGFLPTAITWNILVRAV 680



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 281/657 (42%), Gaps = 99/657 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L++      +  EA  +F  +     C P   S+N LL A  +S      E   K  +  
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               +  T   L++V C  G+F+K   +   +   G   + + +  L+   +K G++  A
Sbjct: 143 RVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFA 202

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM-YDVIIG 213
            E+ + M +  +  +   + ++I GF K+    KA ++++++ +      + + Y+V+I 
Sbjct: 203 LEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMIS 262

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVN 270
           GLCK  +    L+++  MK +    D    S LI   S+ G+L    ++++E+   R V 
Sbjct: 263 GLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGG-ARKVYEEMVGRGVR 321

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              + CN+++  L   G++++ + L + M K                     N  S++I 
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGK-----------------CSLRNVRSYNIF 364

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME--ES 388
           +  L ++GK+D A+ L+  + +     +   Y  ++ GLC +  +  + ++L E E  E 
Sbjct: 365 LKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG 420

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G     F  +S+   LC+   +  A  +V  M  +G               CK       
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRG---------------CKFNSH--- 462

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                           VC +  I G +   ++D A+++FR++   GC   VV+YNI+I+G
Sbjct: 463 ----------------VC-NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILING 505

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L +A+R  EA D  NEM+ KG  P + TY+ LI G  +S  +D A+    + L+     P
Sbjct: 506 LLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDT-GHKP 564

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA-------------------------- 602
           D+I Y  +I  LC +G+ +DA+ L++ + +K C                           
Sbjct: 565 DIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWA 624

Query: 603 --------PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                   P+ I++   + GLC C R   A+        +G  P    +  L+ A +
Sbjct: 625 HILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 241/560 (43%), Gaps = 78/560 (13%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF---------SILLVAFSKWGEVDKACEL 157
           LL+ Y  +   ++AL VF  +        HVF         + LL AF +  +  +A   
Sbjct: 83  LLKAYAKTRMPNEALHVFQTM-------PHVFGCSPTIRSFNTLLNAFVESHQWARAENF 135

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            +  +   +  N +T+ VL+    KK   +K   L   M  +G + D   Y  +IGG+ K
Sbjct: 136 FKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAK 195

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC- 276
           +  L  AL+++ EM+  G+ PD                                  ++C 
Sbjct: 196 SGDLGFALEVFDEMRERGVEPD----------------------------------VVCY 221

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N I+      G   +A  + + +++ E                V P+  S++++I+ L K
Sbjct: 222 NMIIDGFFKRGDFVKAGEMWERLLREE---------------LVFPSVVSYNVMISGLCK 266

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+    L ++  M +     ++F Y+ LI GL  +  L  + ++  EM   G +P   T
Sbjct: 267 CGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVT 326

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N+M   LC+  +V     L  +M        V+   + +K L ++GK  +A      M+
Sbjct: 327 CNAMLNGLCKAGNVEECFELWEEMGKCSLRN-VRSYNIFLKGLFENGKVDDAM-----ML 380

Query: 457 QEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAH---GCCPDVVAYNIIISGLCKA 512
            +G L  D   Y   + GL     V+ AL++  +   H   G   D  AY+ +I+ LCK 
Sbjct: 381 WDGLLEADSATYGVVVHGLCWNGYVNRALQVLEE-AEHREGGMDVDEFAYSSLINALCKE 439

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA+ +   M  +G   +    N+LI+G+ K   +D A+     M  K   S  V++
Sbjct: 440 GRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGK-GCSLTVVS 498

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y  LI+GL  A R  +A    NEM EKG  P+ IT+  LI GL + +   AAL  +    
Sbjct: 499 YNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFL 558

Query: 633 EKGMKPDMFVFVALISAFLS 652
           + G KPD+ ++  +I    S
Sbjct: 559 DTGHKPDIIMYNIVIHRLCS 578



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 218/531 (41%), Gaps = 84/531 (15%)

Query: 189 ALQLFDK-MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           AL +FD  + + GF+  +A++  I+  +  +  L +A             P   I++ + 
Sbjct: 26  ALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAH-----------AP--RIIAAIH 72

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             C ++  LTLL K   + R  N    +  ++  +   + +I     LL A ++    A 
Sbjct: 73  CPCPEDVPLTLL-KAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWAR 131

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                       VSPN  ++++++  + K G+ +    L   M   G   +   Y  LI 
Sbjct: 132 AENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIG 191

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHE 426
           G+  S  L  + E+  EM E G +P     N +     +R D V A  +  R +R +   
Sbjct: 192 GVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVF 251

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V    ++I  LCK G+  E       M +     D+  YSA I GL +   +  A ++
Sbjct: 252 PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKV 311

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           + ++   G  PDVV  N +++GLCKA  V E  +L+ EM  K  + +V +YN+ + G  +
Sbjct: 312 YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM-GKCSLRNVRSYNIFLKGLFE 370

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVI--------------------------------TYT 574
           +G +D AM+    +LE +S +  V+                                 Y+
Sbjct: 371 NGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYS 430

Query: 575 TLIDGLCIAGRPDD-----------------------------------AIMLWNEMEEK 599
           +LI+ LC  GR D+                                   A+ ++ EM  K
Sbjct: 431 SLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGK 490

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GC+   +++  LI GL + +R R A      M EKG KPD+  +  LI   
Sbjct: 491 GCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 6/326 (1%)

Query: 296 LQAMIKGE--PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L  ++K E  P++ + V    + +   SP+++ F  I+  +  D  L LA +  R +  I
Sbjct: 13  LLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAHAP-RIIAAI 71

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVG 412
            C     +   L+     +    E+  + + M    G  PT  + N++            
Sbjct: 72  HCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWAR 131

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A N  +        P V+   +L+K +CK G+  +    LT M   G  PD + Y   IG
Sbjct: 132 AENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIG 191

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI- 531
           G+     +  ALE+F ++   G  PDVV YN+II G  K     +A +++  ++ + L+ 
Sbjct: 192 GVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVF 251

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PSV +YN++I+G CK G   + +    RM + E    D+ TY+ LI GL  AG    A  
Sbjct: 252 PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC-DLFTYSALIHGLSEAGDLGGARK 310

Query: 592 LWNEMEEKGCAPNRITFMALITGLCK 617
           ++ EM  +G  P+ +T  A++ GLCK
Sbjct: 311 VYEEMVGRGVRPDVVTCNAMLNGLCK 336



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 2/201 (0%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVK-REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           G ++  L   G V  A  + ++ + REG    + ++Y+ L+ ALCK   +D  +  ++ M
Sbjct: 393 GVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELM 452

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
              G  ++ +    L+  +    + D A+ VF E+   G     V ++IL+    +    
Sbjct: 453 NKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERF 512

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A + +  M +   + +  T+  LI G  + + +D AL+L+ +   +G   D  MY+++
Sbjct: 513 REAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIV 572

Query: 212 IGGLCKNKQLEMALQLYSEMK 232
           I  LC + ++E ALQLYS ++
Sbjct: 573 IHRLCSSGKVEDALQLYSTLR 593


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/620 (24%), Positives = 281/620 (45%), Gaps = 60/620 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G   +A  +    +  G  V + ++YN L+   C+   +D     +  M   
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPV-DVFAYNTLVAGYCRYGRLDAARRLIASMP-- 132

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D YT TPL++  C+ G+   ALS+ ++++        V +++LL A  K     +A
Sbjct: 133 -VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++++ M       N  T+ V+I+G  ++ RVD A Q+ ++++  GF  D   Y  ++ G
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG 251

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC  K+ E    L+ EM  +   P+               E+T                 
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPN---------------EVTF---------------- 280

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++R     G +++A  +L  M +    A                NT+  +I+IN++
Sbjct: 281 --DMLVRFFCRGGMVERAIEVLDRMSEHGCTA----------------NTTLCNIVINSI 322

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G++D A      M   GC  +   Y  ++ GLC + R E++ ELL EM      P  
Sbjct: 323 CKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+    LC++  +  A+ L+ +M   G    +     L+   C  G+   A      
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +  E   P+ + Y+  + GL   +R+D A EL  ++  + C  +VV +N+++S  C+   
Sbjct: 443 LPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V EA +L  +M+  G  P++ T+N L++G  +  N ++A+  L  ++ K   S D ITY+
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK-GISLDTITYS 558

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK-CDRPRAALVHFRMMKE 633
           +++D L    R ++A+ +++ +++ G  P  + +  +++ LCK C+  R A+  F  M  
Sbjct: 559 SIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDR-AIDFFAHMVS 617

Query: 634 KGMKPDMFVFVALISAFLSE 653
               P+   +V LI     E
Sbjct: 618 NSCMPNESTYVILIEGLARE 637



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 267/573 (46%), Gaps = 24/573 (4%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   D Y  T L++  C  G+   A  V       G  VD   ++ L+  + ++G +D A
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             LI  M    +  +  T+  LI G   + RV  AL L D M +         Y V++  
Sbjct: 125 RRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           +CK+     A+++  EM+  G TP+    + +I                 EDR V+    
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC------------REDR-VDDARQ 228

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           + N +        ++     +L+ +   +   DV V    + +    PN  +FD+++   
Sbjct: 229 ILNRLSSYGFQPDTVSYT-TVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G ++ A+ +   M++ GC  N  L N +I+ +C   R+++++E L  M   G  P  
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLT 453
            +  ++ + LCR      A  L+ +M  +   P  V  NT +   LC+ G   +A   + 
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICI-LCQKGLIDQAILLIE 406

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M + G    IV Y+A + G     RVD ALELF  +    C P+ + Y  +++GLC A+
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAE 463

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+  A +L  EM+      +V T+N+L++ +C+ G +++A+  + +M+E    +P++IT+
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMME-HGCTPNLITF 522

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TL+DG+      ++A+ L + +  KG + + IT+ +++  L + DR   A+  F  +++
Sbjct: 523 NTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQD 582

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            GM+P   ++  ++SA         A +    M
Sbjct: 583 MGMRPKAVMYNKILSALCKRCETDRAIDFFAHM 615



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 266/551 (48%), Gaps = 45/551 (8%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           + P A  +  LIR L   G V +A ++L D ++RE  C P+  +Y  LLEA+CKS     
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE--CQPSVVTYTVLLEAVCKSSGFGQ 190

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSIL- 141
               L EM+  G   +  T   ++   C   + D A  + N +  +G+  + V   ++L 
Sbjct: 191 AMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLK 250

Query: 142 -LVAFSKWGEVDKA-CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L A  +W +V+   CE++E     N   NE TF +L+  F +   V++A+++ D+M++ 
Sbjct: 251 GLCAAKRWEDVEVLFCEMVEN----NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEH 306

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF----EILSKLITSCSDEGE 255
           G  ++  + +++I  +CK  +++ A +  + M   G +PD      +L  L  +   E  
Sbjct: 307 GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDA 366

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             LL + + ++   N +T   N+ + IL   G IDQA  L++ M   E    VG+     
Sbjct: 367 KELLNEMVRKNCPPNEVTF--NTFICILCQKGLIDQAILLIEQM--PEYGCSVGI----- 417

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                     +++ ++N     G++D AL LF  +    C  N   Y  L+ GLC++ RL
Sbjct: 418 ---------VTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERL 465

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTL 434
           + + ELL EM ++       T N +    C++  V  A+ LV++M   G  P  +  NTL
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525

Query: 435 L--IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           L  I E C   +A+E    L  +V +G   D + YS+ +  L    R++ A+++F  +  
Sbjct: 526 LDGITEDCNSEEALE---LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQD 582

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  P  V YN I+S LCK      A D F  M++   +P+ +TY +LI G  + G + +
Sbjct: 583 MGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKE 642

Query: 553 AMLCLSRMLEK 563
           A   LS +  +
Sbjct: 643 ARYVLSELCSR 653



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/505 (22%), Positives = 219/505 (43%), Gaps = 22/505 (4%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R+     L  D+++  C  S      L+  +       +A  + D+++ +G C PN  +Y
Sbjct: 152 RVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG-CTPNIVTY 210

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N ++  +C+   VD     L  +  YG+  D  + T +L+  C + +++    +F E+++
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +  V +E  F +L+  F + G V++A E+++RM +     N     ++I+   K+ RVD 
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +  + M   G + D   Y  ++ GLC+  + E A +L +EM      P+    +  I 
Sbjct: 331 AFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390

Query: 249 SCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
               +G  +  +L+ E   +   +   +  N+++      G +D A  L  ++   EP  
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL-PCEPNT 449

Query: 307 ----------------DVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFRE 349
                           D   E+L        P N  +F+++++   + G ++ A+ L ++
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC  N+  +N L+DG+      EE+ ELL  +   G      T +S+   L R   
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A+ +   ++  G  P       ++  LCK  +   A  F   MV    +P+   Y  
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629

Query: 470 AIGGLIDIKRVDLALELFRDICAHG 494
            I GL     +  A  +  ++C+ G
Sbjct: 630 LIEGLAREGLLKEARYVLSELCSRG 654



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +S  R L  R D+  A  LV +   +G  P V   T LI+ LC+ G+  +A R L     
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 458 EG--------------------------------FLPDIVCYSAAIGGLIDIKRVDLALE 485
            G                                  PD   Y+  I GL D  RV  AL 
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L  D+    C P VV Y +++  +CK+    +A  + +EM  KG  P++ TYN++ING C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +   +D A   L+R L      PD ++YTT++ GLC A R +D  +L+ EM E  C PN 
Sbjct: 219 REDRVDDARQILNR-LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNE 277

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +TF  L+   C+      A+     M E G   +  +   +I++   +     AFE L  
Sbjct: 278 VTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNN 337

Query: 666 M 666
           M
Sbjct: 338 M 338



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 2/206 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R+     L  +++++ C ++      L+      G VEEA  L  Q+   G C P
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG-CTP 517

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  ++N LL+ + + C+ +     L  +   G   D  T + ++ V     + ++A+ +F
Sbjct: 518 NLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMF 577

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + + D G   + V ++ +L A  K  E D+A +    M   +   NE T+ +LI G  ++
Sbjct: 578 HAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLARE 637

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYD 209
             + +A  +  ++   G  S + + D
Sbjct: 638 GLLKEARYVLSELCSRGVLSKSLIED 663


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 308/677 (45%), Gaps = 65/677 (9%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L  L K+  + + +    E++ 
Sbjct: 421  LFINYHGKSGESLKALKRYELMKSKGI-VPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    +   D+A+ +F E+I++    D    + L+    K G  ++
Sbjct: 480  MGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNE 539

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A ++   + + N+   + T+  L+ G  ++ +V + +QL + M  + F  +   Y+ ++ 
Sbjct: 540  AWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------- 265
             LCKN ++  AL +   M  +G  PD    + ++     EG L    +  W         
Sbjct: 600  CLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLD---EAFWMFCQMKKVL 656

Query: 266  DRDVNTMTLLCNSIMR--------------ILVSNGSIDQA--YNLLQAMIK-------- 301
              D  T+  +  S +R              IL  +  +D++  ++L++ ++K        
Sbjct: 657  APDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSI 716

Query: 302  --GEPIADVGV------------------------EMLMIFKG-TVSPNTSSFDIIINTL 334
               E IA  G+                        E++  F+   VS  T S++ +I  L
Sbjct: 717  EFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGL 776

Query: 335  LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + +  +D+A  LF EM ++GC  + F Y+ ++D +  S R+E+  ++  EM   G+K T+
Sbjct: 777  VDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTY 836

Query: 395  FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
             T N++   L + + +  A+NL  ++  +G  P       L+  L K G   +A     +
Sbjct: 837  VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896

Query: 455  MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            M++ G  P+   Y+  + G       +   ELF  +   G  PD+ +Y ++I  LC   R
Sbjct: 897  MLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGR 956

Query: 515  VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
            + +    F ++   GL P + TYNLLI+G  KSG +++A L L   +EK+  +P++ TY 
Sbjct: 957  LNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEA-LSLYNDMEKKGIAPNLYTYN 1015

Query: 575  TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +LI  L  AG+  +A  ++ E+  KG  PN  T+ ALI G      P  A   +  M   
Sbjct: 1016 SLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVG 1075

Query: 635  GMKPDMFVFVALISAFL 651
            G +P+   ++ L +  L
Sbjct: 1076 GCRPNSSTYMQLPNQML 1092



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 265/617 (42%), Gaps = 56/617 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  G VG V +   +FD ++R+ +   N  ++  +  A+     +    + L  M++ 
Sbjct: 110 LMRAHGRVGDVAQ---VFDLMQRQ-IIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEA 165

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + YT   L+     SG   +A+ V+  +   G V     +S+L++AF K  + +  
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   +R N  ++ + I    +  R+++A ++  KM + G   D     V+I  
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   +L  A  ++ +MK S   PD      L+  C D G+ +  V EIW          
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD-SRSVSEIW---------- 334

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                   L ++G  D                                N  S+   ++ L
Sbjct: 335 ------NALKADGYND--------------------------------NVVSYTAAVDAL 356

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G++D AL +F EM Q G +   + YN+LI G   ++R   + EL   M   G  P  
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T         +  + + AL     M+ +G  P V     ++  L K G+   A R   +
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  PD + Y+  I         D A+++F ++  + C PDV+A N +I  L KA R
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  +F E+    L P+  TYN L+ G  + G + + M  L  M    S  P++ITY 
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-NSNSFPPNIITYN 595

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T++D LC  G  + A+ +   M   GC P+  ++  ++ GL K  R   A   F  MK K
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-K 654

Query: 635 GMKPDMFVFVALISAFL 651
            + PD      ++ +F+
Sbjct: 655 VLAPDYATVCTILPSFV 671



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 192/457 (42%), Gaps = 59/457 (12%)

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIKGEP 304
            +   E  L L +    + R V+T T  CN ++ ++ ++G +    Q ++L+Q  I    
Sbjct: 77  AAADPEEALELFLSVARQPRVVHT-TESCNYMLELMRAHGRVGDVAQVFDLMQRQI---- 131

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                          +  N  +F  +   +  +G L  A      M + G + N + YN 
Sbjct: 132 ---------------IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNG 176

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI  L  S    E+ ++ + M   G  PT  T + +     +R+D    + L+ +M  +G
Sbjct: 177 LIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARG 236

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P V   T+ I+ L + G+  EA+R L  M +EG  PD+V  +  I  L D  R+  A 
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296

Query: 485 ELFRDICAHGCCPD-----------------------------------VVAYNIIISGL 509
           ++F  + A    PD                                   VV+Y   +  L
Sbjct: 297 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+  RV EA D+F+EM  KG+IP   +YN LI+G+ K+   ++A+   + M      +P+
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM-NIHGPTPN 415

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
             T+   I+    +G    A+  +  M+ KG  P+ +   A++ GL K  R   A   F 
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +K  G+ PD   +  +I       N   A ++  EM
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM 512



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 1/362 (0%)

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G      ++L++    +P   + + + +  +  V   T S + ++  +   G++     +
Sbjct: 64  GDAGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQV 123

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M +     NV  +  +   +     L  +   L  M+E+G     +T N +   L +
Sbjct: 124 FDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVK 183

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A+++ + M   G  P V+  ++L+    K   A      L +M   G  P++  
Sbjct: 184 SGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYS 243

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I  L    R++ A  + R +   GC PDVV   ++I  LC A R+A+A+D+F +M 
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                P   TY  L++    SG+  +++  +   L+ +  + +V++YT  +D LC  GR 
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGD-SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D+A+ +++EM++KG  P + ++ +LI+G  K DR   AL  F  M   G  P+ +  V  
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 647 IS 648
           I+
Sbjct: 423 IN 424


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 240/535 (44%), Gaps = 54/535 (10%)

Query: 112 CNSG---QFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
           C  G    FD AL+ FN+++  + +     F+ LL A  +    D    +  +M+   + 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            +  T  +LI+       V     +  K+ K GF      ++ +I GLC   ++  A++ 
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
              +   G  P                              V T T++ N + +I    G
Sbjct: 197 LDYIMSRGYQPT-----------------------------VYTHTMIVNGLCKI----G 223

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
               A   ++ M++ +                  P   S+ III++L K+  ++ A+ LF
Sbjct: 224 KTSAAIVWMKKMVELD----------------CEPEVVSYSIIIDSLCKNRLVNEAVDLF 267

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M  IG    V  YN+LI G+CNS + +++  L +EM E   KP   T + +   LC+ 
Sbjct: 268 YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V+ AL++  KM     EP +   + LI  +CK     E+   L +M+     PD+V +
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTF 387

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  +        V  A  +   +   G  P+VV YN ++ G C   ++ EA  +F+ M+ 
Sbjct: 388 SIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN 447

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG  P V +YN+LI G+CKS  ID+A      M  K   +P+ IT+TTLI GLC AGRP 
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK-GLTPNSITHTTLISGLCQAGRPY 506

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            A  L+ +M   GC P+ IT+  L++G CK      AL  F  +K+  +KP+  +
Sbjct: 507 AAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVI 561



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 227/485 (46%), Gaps = 18/485 (3%)

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           S  D AL  F++M           ++ ++  L + K  +  + +Y +M+  G+       
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGV------- 135

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                SCS    LT+L+  +     V     +   I + L    SI     L+  +    
Sbjct: 136 -----SCSVY-TLTILINCLCHLHLVGLGFSVLGKIFK-LGFKPSIITFNTLINGLCIEG 188

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            I +   ++  I      P   +  +I+N L K GK   A+   ++M ++ C   V  Y+
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +ID LC +  + E+ +L   M   G  PT  T NS+   +C       A  L ++M   
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             +P V   ++L+  LCK G  +EA      M+Q    PDIV YS+ I G+        +
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             L  ++ +    PDVV ++I +   CK   V+EA+ + N MI +GL P+V TYN L++G
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDG 428

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +C    +D+A      M+ K   +PDV++Y  LI G C + R D+A  L++EM  KG  P
Sbjct: 429 YCLHSQMDEARKVFDIMVNK-GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL--SELNPPLA-F 660
           N IT   LI+GLC+  RP AA   F+ M   G  PD+  +  L+S F     L+  LA F
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547

Query: 661 EVLKE 665
           E LK+
Sbjct: 548 EALKK 552



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 258/565 (45%), Gaps = 52/565 (9%)

Query: 41  GSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYD 100
           GS    ++A   F+Q+       P    +N LL AL +    D V    ++M+ +G    
Sbjct: 80  GSFSNFDDALAYFNQMVHMNP-FPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCS 138

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
            YTLT L+   C+        SV  +I   G+    + F+ L+      G + +A E ++
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +     +    T  ++++G  K  +   A+    KM +     +   Y +II  LCKN+
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            +  A+ L+  M+  GI+P     + LI                           +CNS 
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYG-------------------------MCNS- 292

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                  G   QA  L + M++                  + P+  +F I+++ L K+G 
Sbjct: 293 -------GQWKQASILFKEMLEW----------------NMKPDVVTFSILVDALCKEGV 329

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  ALS+F +M QI    ++  Y++LI G+C S+  +ES  LL EM     +P   T + 
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                C++  V  A +++  M  +G  P V     L+   C H +  EA +    MV +G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD++ Y+  I G    +R+D A +LF ++   G  P+ + +  +ISGLC+A R   A+
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +LF +M + G  P + TY+ L++G+CK G++D+A L L   L+K    P+ +    L+ G
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA-LALFEALKKSQLKPNHVICKILLGG 568

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPN 604
           +C AG+ +DA  L++ +  +   P+
Sbjct: 569 MCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 180/352 (51%), Gaps = 1/352 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           IFK    P+  +F+ +IN L  +G++  A+     +   G    V+ +  +++GLC   +
Sbjct: 165 IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              +   +++M E   +P   + + +   LC+ + V  A++L   MR  G  P V     
Sbjct: 225 TSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  +C  G+  +A     +M++    PD+V +S  +  L     V  AL +F  +    
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD+V Y+ +I G+CK+    E+  L NEM+++ + P V T+++ ++ +CK G + +A 
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             ++ M+E+    P+V+TY +L+DG C+  + D+A  +++ M  KGCAP+ +++  LI G
Sbjct: 405 SIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            CK +R   A   F  M  KG+ P+      LIS       P  A E+ K+M
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 192/473 (40%), Gaps = 53/473 (11%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P  + F  LI  L   G + EA    D +   G   P  Y++  ++  LCK        +
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY-QPTVYTHTMIVNGLCKIGKTSAAIV 230

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            +K+M +     +  + + ++   C +   ++A+ +F  +   G     V ++ L+    
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMC 290

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
             G+  +A  L + M + N++ +  TF +L+    K+  V +AL +F KM +     D  
Sbjct: 291 NSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y  +I G+CK+   + +  L +EM    I PD    S                  IW D
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS------------------IWVD 392

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                          +    G + +A +++                LMI +G + PN  +
Sbjct: 393 ---------------VFCKKGMVSEAQSIIN---------------LMIERG-LRPNVVT 421

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +++      ++D A  +F  M   GC  +V  YN LI G C S R++E+ +L  EM 
Sbjct: 422 YNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMS 481

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P   T  ++   LC+      A  L +KM   G  P +   + L+   CKHG   
Sbjct: 482 HKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLD 541

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           EA      + +    P+ V     +GG+    +++ A ELF  +      PDV
Sbjct: 542 EALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 231/499 (46%), Gaps = 23/499 (4%)

Query: 173 FCVLIHGFVKKSRVDK--ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           F  L+    K  + D   +L L  KM K G+         ++ G C  K++  A+ L  +
Sbjct: 45  FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104

Query: 231 MKGSGITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M   G  PD    + LI      +   E   LV  + + R      +    ++  L   G
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRG 163

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            ID A+NLL  M   +  ADV +                F+ II++L K   +D AL+LF
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVI----------------FNTIIDSLCKYRHVDDALNLF 207

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +EM   G   NV  Y++LI  LC+  R  ++ +LL +M E    P   T N++     + 
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
              V A  L   M  +  +P +     LI   C H +  +A +    MV +   PD+  Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G    KRV+   ELFR++   G   D V Y  +I GL        A+ +F +M++
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G+ P + TY++L++G C +G +++A+     M +K     D+  YTT+I+G+C AG+ D
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVD 446

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           D   L+  +  KG  PN +T+  +I+GLC     + A    + MKE G  PD   +  LI
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506

Query: 648 SAFLSELNPPLAFEVLKEM 666
            A L + +   + E+++EM
Sbjct: 507 RAHLRDGDKAASAELIREM 525



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 232/493 (47%), Gaps = 23/493 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLV--EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +P+ + +N LL A+ K    DLV     L +M   G+     TL+ LL  YC+  +   A
Sbjct: 39  LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 98

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +++ +++++ G+  D   F+ L+       +  +A  L++RM     + N  T+ V+++G
Sbjct: 99  VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 158

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K+  +D A  L +KM  +   +D  +++ II  LCK + ++ AL L+ EM+  GI P+
Sbjct: 159 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               S LI+     G   + + L+ ++ E + +N   +  N+++   V  G   +A  L 
Sbjct: 219 VVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLH 277

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             MIK                 ++ P+  +++ +IN      +LD A  +F  M    C 
Sbjct: 278 DDMIKR----------------SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  YN LI G C S R+E+  EL REM   G      T  ++ + L    D   A  +
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            ++M   G  P +   ++L+  LC +GK  +A      M +     DI  Y+  I G+  
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             +VD   +LF  +   G  P+VV YN +ISGLC  + + EA  L  +M   G +P   T
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 537 YNLLINGWCKSGN 549
           YN LI    + G+
Sbjct: 502 YNTLIRAHLRDGD 514



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 215/433 (49%), Gaps = 13/433 (3%)

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K+ +L+ A+ L+  M  S   P     +KL+++ +   +  L++          ++ LL 
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI----------SLALLG 68

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
              M  L    SI    +LL     G+ I+D    +  + +    P+T +F  +I+ L  
Sbjct: 69  K--MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 126

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             K   A++L   M Q GC  N+  Y  +++GLC    ++ ++ LL +ME +  +     
Sbjct: 127 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 186

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC+ + V  ALNL ++M  +G  P V   + LI  LC +G+  +A + L+DM+
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           ++   P++V ++A I   +   +   A +L  D+      PD+  YN +I+G C   R+ 
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A+ +F  M++K   P + TYN LI G+CKS  ++     L R +       D +TYTTL
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE-LFREMSHRGLVGDTVTYTTL 365

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I GL   G  D+A  ++ +M   G  P+ +T+  L+ GLC   +   AL  F  M++  +
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425

Query: 637 KPDMFVFVALISA 649
           K D++++  +I  
Sbjct: 426 KLDIYIYTTMIEG 438



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 195/433 (45%), Gaps = 31/433 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
             EA  L D++ + G C PN  +Y  ++  LCK   +DL    L +M+      D     
Sbjct: 130 ASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            ++   C     D AL++F E+   G     V +S L+     +G    A +L+  M + 
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  N  TF  LI  FVK+ +  +A +L D M K     D   Y+ +I G C + +L+ A
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMR 281
            Q++  M      PD +  + LI        +   T L +E+   R +   T+   ++++
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQ 367

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +G  D A  + + M+                   V P+  ++ I+++ L  +GKL+
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLE 411

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            AL +F  M +     ++++Y  +I+G+C + ++++ ++L   +   G KP   T N+M 
Sbjct: 412 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA--------MEAFRFL 452
             LC ++ +  A  L++KM+  G  P    +NTL+   L    KA        M + RF+
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 531

Query: 453 TDMVQEGFLPDIV 465
            D    G + +++
Sbjct: 532 GDASTIGLVANML 544


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/570 (26%), Positives = 246/570 (43%), Gaps = 84/570 (14%)

Query: 113 NSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N    D ALS FN ++  H       F+ LL + +K  +      L  +MD   I  +  
Sbjct: 44  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 103

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  +LI+ F   +R   A  +  K+ K G   D A +  +I GLC   ++  AL L+ +M
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G G  P+                             V T   L N + ++    G+ + 
Sbjct: 164 IGEGFQPN-----------------------------VVTYGTLINGLCKV----GNTNA 190

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL++M +G    DV V                +  II++L KD ++  A +LF +M 
Sbjct: 191 AIRLLRSMEQGNCQPDVVV----------------YTSIIDSLCKDRQVTEAFNLFSKMV 234

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   ++F Y +LI  LCN    +    LL +M  S   P     +++   LC+   + 
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++V  M ++G EP V     L+   C   +  EA +    MV  G+ P+++ Y+  I
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G   I+R+D A  LF ++C     P+ V YN ++ GLC   R+ +A  LF+EM+  G I
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRM------------------------------- 560
           P +ATY +L++  CK  ++D+AM  L  +                               
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 561 ---LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
              L  +   P+V TYT +I+GLC  G  D+A  L+ EM+  GC+P+  T+  +  GL +
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                 A+   + M  +G   D+     L+
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 244/522 (46%), Gaps = 22/522 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +N LL ++ K+     V     +M  +G   D YTL  L+  +C+  +   A SV
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +I+  G   D   F+ L+      G++  A  L ++M     + N  T+  LI+G  K
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
               + A++L   M +     D  +Y  II  LCK++Q+  A  L+S+M G GI+PD   
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI S  +  E   +T L+ ++   + +  + +  ++++  L   G I +A++++   
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF-STVVDALCKEGKITEAHDVVD-- 301

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                        +MI +G V PN  +++ +++      ++D A+ +F  M   G   NV
Sbjct: 302 -------------MMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G C   R++++  L  EM +    P   T N++   LC    +  A+ L  +
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +    +L+  LCK     EA   L  +      PDI  Y+  I G+     
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A ++F ++ + G  P+V  Y I+I+GLC+   + EA  LF EM   G  P   TYN 
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           +  G  ++    +A+  L  ML +   S DV T T L++ LC
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLAR-GFSADVSTTTLLVEMLC 568



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 217/469 (46%), Gaps = 23/469 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D AL  F++M           ++ ++  + K KQ      L ++M   GI PD   L+ 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 246 LITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI S           ++L K +      +T T    +++R L   G I  A +L   MI 
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATF--TTLIRGLCVEGKIGDALHLFDKMI- 164

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           GE                  PN  ++  +IN L K G  + A+ L R M Q  C  +V +
Sbjct: 165 GEGF---------------QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y ++ID LC   ++ E++ L  +M   G  P  FT  S+   LC   +      L+ +M 
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                P V   + ++  LCK GK  EA   +  M+  G  P++V Y+A + G      +D
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+++F  +  +G  P+V++YN +I+G CK QR+ +A  LF EM  K LIP+  TYN L+
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G C  G +  A+     M+      PD+ TY  L+D LC     D+A+ L   +E    
Sbjct: 390 HGLCHVGRLQDAIALFHEMV-AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            P+   +  +I G+C+     AA   F  +  KG++P++  +  +I+  
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 205/428 (47%), Gaps = 22/428 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   ++ +G C P+   Y  ++++LCK   V        +M 
Sbjct: 176 GTLINGLCKVGNTNAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T T L+   CN  ++    ++ N++I+   + D  +FS ++ A  K G++ 
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++++ M    +  N  T+  L+ G   +S +D+A+++FD M  +G+A +   Y+ +I
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G CK ++++ A  L+ EM    + P+    + L+      G L   +    E       
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE------- 407

Query: 273 TLLCNSIMRILVSNGSIDQ--AYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDI 329
                     +V++G I     Y +L   +  +   D  + +L   +G+ + P+   + I
Sbjct: 408 ----------MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ + + G+L+ A  +F  ++  G   NV  Y  +I+GLC    L+E+ +L  EM+ +G
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T N++ + L + ++ + A+ L+++M  +G    V   TLL++ LC         
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577

Query: 450 RFLTDMVQ 457
           + L++ VQ
Sbjct: 578 QILSEFVQ 585



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 1/279 (0%)

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           N N L+++      M      P+    N +   + + +      +L  +M   G  P V 
Sbjct: 44  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 103

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +LI   C   +   AF  L  +++ G  PD   ++  I GL    ++  AL LF  +
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  P+VV Y  +I+GLCK      A  L   M      P V  Y  +I+  CK   +
Sbjct: 164 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 223

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A    S+M+  +  SPD+ TYT+LI  LC          L N+M      P+ + F  
Sbjct: 224 TEAFNLFSKMV-GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           ++  LCK  +   A     MM  +G++P++  + AL+  
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           ++   +D AL  F  +      P  V +N +++ + K ++      L N+M + G+ P V
Sbjct: 43  LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 102

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T N+LIN +C       A   L+++L K    PD  T+TTLI GLC+ G+  DA+ L++
Sbjct: 103 YTLNILINSFCHLNRPGFAFSVLAKIL-KLGLQPDTATFTTLIRGLCVEGKIGDALHLFD 161

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M  +G  PN +T+  LI GLCK     AA+   R M++   +PD+ V+ ++I +   + 
Sbjct: 162 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 221

Query: 655 NPPLAFEVLKEM 666
               AF +  +M
Sbjct: 222 QVTEAFNLFSKM 233


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 218/484 (45%), Gaps = 56/484 (11%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+  +VK  RV+ A   F    K+ F  D   Y+ ++ G  K   ++ AL L+ EMK SG
Sbjct: 108 LLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG 167

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           I     +L                                 N ++R L S G I  A+ +
Sbjct: 168 IA----VLRSH------------------------------NIVLRGLCSGGKISMAWEV 193

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + M                  G  SPN  S+ I+I+ L K  K+D A++LF++M     
Sbjct: 194 FKDM-----------------SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAI 236

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  LIDGL    R++E+Y+L  E    G  PT  T N+M   LC+   +  AL 
Sbjct: 237 YPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALT 296

Query: 416 LVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           L   M  + H +P +   + LI  L    +  +A+    +M+  G  PD+V Y+  + GL
Sbjct: 297 LYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGL 356

Query: 475 IDIKRVDLALELFRDICAHGCC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                 D A+E+FR +     C P+V+ Y ++I   CK  R+ +A  L  EM  + L+P 
Sbjct: 357 CKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPD 416

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             T+  +I   CK   ID+A      +   ++  PD + + T++ G C   R DDA  L 
Sbjct: 417 AVTFTTVIQKLCKESRIDEAHELFESI--GKTCKPDSVLFNTMLAGYCKITRIDDAKKLH 474

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + M + GCAP   T+ AL+TG C+  R   AL+ +  M E G  P+  +   L+    ++
Sbjct: 475 DRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHL-AELVDRTRTD 533

Query: 654 LNPP 657
             PP
Sbjct: 534 HPPP 537



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 224/471 (47%), Gaps = 59/471 (12%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKAC 155
           + ++++T   LL VY  + + + A   F   + + +  DE  ++ L+  F K G+V KA 
Sbjct: 98  FTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKAL 157

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGG 214
            L   M D  I +  ++  +++ G     ++  A ++F  M  SG F+ +   Y ++I G
Sbjct: 158 ALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDG 214

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK+++++ A+ L+ +M    I PD      LI                           
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDG------------------------- 249

Query: 275 LCNSIMRILVSNGSIDQAYNLLQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                   L     + +AY+L + A  KG                   P   +++ +I+ 
Sbjct: 250 --------LGKQRRVKEAYDLFEEARAKG-----------------CHPTVVTYNTMIDG 284

Query: 334 LLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           L K G+++ AL+L+ +M +   ++ ++F Y+ LI+GL  SNR E++YEL  EM ++G  P
Sbjct: 285 LCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSP 344

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRF 451
              T N++   LC+      A+ + RKM V    +P V   T+LI   CK  +  +A + 
Sbjct: 345 DVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKL 404

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             +M     LPD V ++  I  L    R+D A ELF  I    C PD V +N +++G CK
Sbjct: 405 AKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCK 463

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             R+ +A+ L + M+  G  P++ATY  L+ G+C++G    A++    M+E
Sbjct: 464 ITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIE 514



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 33/452 (7%)

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +E +L LY ++    + PD  ++ K+I    D      + +   +          CN+++
Sbjct: 56  IEKSLGLYGDI----LVPD--LVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLL 109

Query: 281 RILVSNGSIDQAYNLLQAMIKG--EPIADVGVEMLM--IFK-GTVSPNTS---------- 325
            + V    ++ A+   Q+ +K   EP  +V    LM   FK G V    +          
Sbjct: 110 SVYVKARRVEDAHLFFQSHMKNVFEP-DEVSYNTLMNGFFKAGDVKKALALFGEMKDSGI 168

Query: 326 ----SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
               S +I++  L   GK+ +A  +F++M+ I    N+  Y  +IDGLC S +++++  L
Sbjct: 169 AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITL 227

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            ++M +    P   T  ++   L +++ V  A +L  + R +G  P V     +I  LCK
Sbjct: 228 FKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCK 287

Query: 442 HGKAMEAFRFLTDMVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            G+   A     DMV+E  L PD+  YSA I GL    R + A EL+ ++   GC PDVV
Sbjct: 288 CGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVV 347

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLI-PSVATYNLLINGWCKSGNIDQAMLCLSR 559
            YN ++ GLCK+    +A ++F +M    +  P+V TY +LI+ +CK   +  A+  L++
Sbjct: 348 TYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVK-LAK 406

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +E  S  PD +T+TT+I  LC   R D+A  L+  +  K C P+ + F  ++ G CK  
Sbjct: 407 EMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKIT 465

Query: 620 R-PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           R   A  +H RM+ + G  P +  + AL++ F
Sbjct: 466 RIDDAKKLHDRML-DSGCAPTLATYTALVTGF 496



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 3/311 (0%)

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N F  NNL+     + R+E+++   +   ++ F+P   + N++     +  DV  AL L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M+  G      HN ++++ LC  GK   A+    DM    F P+++ Y+  I GL  
Sbjct: 160 FGEMKDSGIAVLRSHN-IVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCK 217

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            ++VD A+ LF+ +      PDVV Y  +I GL K +RV EA DLF E   KG  P+V T
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN +I+G CK G I+ A+     M+ +    PD+ TY+ LI+GL ++ R + A  L+ EM
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM-KPDMFVFVALISAFLSELN 655
            + GC+P+ +T+  L+ GLCK      A+  FR M    +  P++  +  LI  F     
Sbjct: 338 LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR 397

Query: 656 PPLAFEVLKEM 666
              A ++ KEM
Sbjct: 398 LGDAVKLAKEM 408



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 196/439 (44%), Gaps = 26/439 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A++ F Q   + +  P+  SYN L+    K+  V        EM+D G    + +  
Sbjct: 118 VEDAHLFF-QSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLR-SHN 175

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            +L+  C+ G+   A  VF ++      +   ++I++    K  +VDKA  L ++M D  
Sbjct: 176 IVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA 235

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +  T+  LI G  K+ RV +A  LF++    G       Y+ +I GLCK  ++E AL
Sbjct: 236 IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENAL 295

Query: 226 QLYSEM-KGSGITPDFEILSKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            LY +M +   + PD    S LI   + S+ GE    + E   D   +   +  N+++  
Sbjct: 296 TLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDG 355

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +G  D+A  + + M  G                   PN  ++ ++I+   K  +L  
Sbjct: 356 LCKSGCEDKAMEIFRKMGVGN---------------VCDPNVITYTVLIDRFCKVDRLGD 400

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ L +EM     + +   +  +I  LC  +R++E++EL   + ++  KP     N+M  
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLA 459

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C+   +  A  L  +M   G  P +   T L+   C+ G+  +A     +M++ GF P
Sbjct: 460 GYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519

Query: 463 DIVCYSAAIGGLIDIKRVD 481
           +       +  L+D  R D
Sbjct: 520 E-----RHLAELVDRTRTD 533



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 3/255 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + RR+     L ++     C  +      +I  L   G +E A  L+D + RE    P
Sbjct: 250 LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKP 309

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++Y+ L+  L  S   +      +EM D G   D  T   LL   C SG  DKA+ +F
Sbjct: 310 DMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIF 369

Query: 125 NEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++      D +V  +++L+  F K   +  A +L + M+  ++  +  TF  +I    K
Sbjct: 370 RKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCK 429

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +SR+D+A +LF+ + K+    D+ +++ ++ G CK  +++ A +L+  M  SG  P    
Sbjct: 430 ESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLAT 488

Query: 243 LSKLITSCSDEGELT 257
            + L+T     G  +
Sbjct: 489 YTALVTGFCRTGRYS 503


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 227/506 (44%), Gaps = 50/506 (9%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M+   +  N  T  +LI+ F +  RVD    +  K  K G       +  +I GL K  +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
              A++L+ +M   G  PD    + +I      GE  L                      
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETAL---------------------- 98

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                      A  L + M       + G ++          N  ++  +I++L K  ++
Sbjct: 99  -----------AAGLFKKM------EEAGCQL----------NVVTYSTLIHSLCKYRRV 131

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + AL +F  M        +F Y +LI GLCN +R +E+  LL EM      P   T N +
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVL 191

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   V+ A  +++ M   G EP V     L+       + +EA +    M+ +G 
Sbjct: 192 VDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC 251

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            PD+  YS  I G    KR+D A +LF ++   G  P+ V+YN +I GLC+  R+ EA+D
Sbjct: 252 KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQD 311

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF  M T G +P++ TY +L++G+CK G + +A   L R ++     P+++ Y  L++ +
Sbjct: 312 LFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR-LFRAMQSTYLKPNLVMYNILVNAM 370

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C +G   DA  L++E+   G  PN   +  +I GLCK      AL  FR M++ G  PD 
Sbjct: 371 CKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
           F +  +I  FL   +   A  ++ EM
Sbjct: 431 FSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 220/474 (46%), Gaps = 15/474 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  + N L+   C+   VDL    L +    G      T T L+      G+F +A+ +
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F++++  G   D++ ++ ++    K GE   A  L ++M++   +LN  T+  LIH   K
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV++AL +F  M     +     Y  +I GLC   + + A  L +EM    I P+   
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + L+ +   EG      K +  +  + TMT +   +   +V+  S+   Y++   +++ 
Sbjct: 188 FNVLVDTFCKEG------KVLAAEGVLKTMTEM--GVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + DV     MI KG   P+  S+ I+IN   K  ++D A  LF EM   G   N   Y
Sbjct: 240 RKLFDV-----MITKG-CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI GLC   RL E+ +L + M  +G  P  +T   +    C++  +  A  L R M+ 
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
              +P +    +L+  +CK G   +A    +++   G  P++  Y+  I GL     +D 
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           ALE FR++   GC PD  +YN+II G  + +  + A  L  EM  +G I    T
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 197/432 (45%), Gaps = 65/432 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  LG VG   +A  LFD +   G C P++Y+Y  ++  LCK     L     K+M++ 
Sbjct: 51  LINGLGKVGKFAQAVELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEA 109

Query: 96  G---------------------------WGYDK--------YTLTPLLQVYCNSGQFDKA 120
           G                           + Y K        +T T L+Q  CN  ++ +A
Sbjct: 110 GCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEA 169

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            ++ NE+     +   V F++L+  F K G+V  A  +++ M +  +  +  T+  L++G
Sbjct: 170 SALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +   + V +A +LFD M   G   D   Y ++I G CK K+++ A QL++EM   G TP+
Sbjct: 230 YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVN-------TMTLLCNSIMRILVSNGSIDQA 292
               + LI      G L    ++++++   N       T  +L +   +     G + +A
Sbjct: 290 NVSYNTLIHGLCQLGRLR-EAQDLFKNMHTNGNLPNLYTYAILLDGFCK----QGYLGKA 344

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L +AM                    + PN   ++I++N + K G L  A  LF E+  
Sbjct: 345 FRLFRAMQ----------------STYLKPNLVMYNILVNAMCKSGNLKDARELFSELFV 388

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
           IG   NV +Y  +I+GLC    L+E+ E  R ME+ G  P  F+ N + R   + +D   
Sbjct: 389 IGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESR 448

Query: 413 ALNLVRKMRVQG 424
           A++L+ +MR +G
Sbjct: 449 AVHLIGEMRDRG 460


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 242/539 (44%), Gaps = 64/539 (11%)

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
           L+  ++ ++I G     R  +A +L  +M   G       + +I+  LC+ K+++ AL  
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 228 YSEMKGSGITP--DFEILS--KLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-NSIMRI 282
           +       ++P  D +++S   LI   +D G + +  +   E     +  ++   +I+  
Sbjct: 62  FHS-----VSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINA 116

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L      DQA    + M+  +                  P+  +F ++I  L K GKL+ 
Sbjct: 117 LFKAHRPDQAIACFERMVARK----------------CDPDLRTFTVVITGLCKAGKLNR 160

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +F+EM + G   ++ +Y +L+DGL  ++ ++E+ +LL+E+   G KPT  T  S   
Sbjct: 161 ACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFIS 220

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+   V  A  LVR+M   G     +    +       GK  EA     +MV++G   
Sbjct: 221 GLCKNGRVEEAGKLVREM---GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTL 277

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK----------- 511
           D+ CY+  I GL  ++R D A E+F  +   GC PD   Y +I+S  CK           
Sbjct: 278 DVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVV 337

Query: 512 ------------------------AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
                                     R  EA ++++ M+ K + PS+ TYN+L+ G CK 
Sbjct: 338 EIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKL 397

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           G    A L L  M E++   P +++Y TLI GL  AGR D+AI ++ EM + G  P+  +
Sbjct: 398 GQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPS 457

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +LI  L   DR   A    R M   G+ PD   + AL+           A++VL EM
Sbjct: 458 CTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEM 516



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 244/553 (44%), Gaps = 28/553 (5%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN ++  LC +         LKEM+  G    + T   +L+  C   + D+ALS F+ +
Sbjct: 6   SYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSV 65

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                +D   ++ L++  +  G +D ACEL E M     +     +  +I+   K  R D
Sbjct: 66  SPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKAHRPD 124

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A+  F++M       D   + V+I GLCK  +L  A +++ EM   G  PD  + + L+
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLV 184

Query: 248 TSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
              S      E   L++EI   R +    +   S +  L  NG +++A  L++ M K   
Sbjct: 185 DGLSKASMMDEARKLLQEIVS-RGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM-- 241

Query: 305 IADVGVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                 E+L  IF G V                +GK++ AL+L  EM + G   +V  Y 
Sbjct: 242 ---CAAEVLHCIFGGYVL---------------EGKIEEALTLKDEMVKKGVTLDVRCYT 283

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           NLI GL    R +E+ E+   M   G  P   T   +    C++  +  A  +V  M   
Sbjct: 284 NLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAA 343

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G E        L+       +A EA    + M+++   P IV Y+  + GL  + +   A
Sbjct: 344 GLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADA 403

Query: 484 LELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             + R++    G  P +V+Y  +I GL KA R  EA D+F EM+  G++P   +   LI 
Sbjct: 404 RLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQ 463

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
               +  +D+A   L R + +   +PD + Y  L+  LC   +   A  +  EM +  C 
Sbjct: 464 ALAMADRMDEATQLL-RDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCV 522

Query: 603 PNRITFMALITGL 615
           P+  TF A+  G 
Sbjct: 523 PDGSTFRAMKLGF 535



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 40/270 (14%)

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           M +V  YN +I GLC + R   +YELL+EME  G K +  T   + + LC R++V  AL+
Sbjct: 1   MLDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS 60

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
               +  +                             +D+       D+V Y+  I GL 
Sbjct: 61  YFHSVSPR-----------------------------SDL-------DVVSYTTLIMGLA 84

Query: 476 DIKRVDLALELFRDICAHGC-CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           D  R+D+A ELF ++ + G  C  VVAY  II+ L KA R  +A   F  M+ +   P +
Sbjct: 85  DSGRIDVACELFEEMSSSGSQC--VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDL 142

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T+ ++I G CK+G +++A      M  ++   PD+I YT+L+DGL  A   D+A  L  
Sbjct: 143 RTFTVVITGLCKAGKLNRACEVFQEM-NRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQ 201

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           E+  +G  P  +T+ + I+GLCK  R   A
Sbjct: 202 EIVSRGMKPTEVTYTSFISGLCKNGRVEEA 231


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 257/548 (46%), Gaps = 56/548 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++  + + G+++ A  L   +    +  N  T+  ++     + R+  AL + D+M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G A    MY VI+   C+      A+++  ++   G   D              G   
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDV-------------GN-- 194

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ---------------AMIKG 302
                             CN ++  +   GS+D+A +LL+               A++KG
Sbjct: 195 ------------------CNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKG 236

Query: 303 EPIADVG--VEMLM--IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
             +A     V+ LM  + +    PN  +F+ +I+ L ++G  +    +  +M + GC  +
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           + +Y  +IDG+C    L+ ++E+L  M   G KP     N++ + LC  +       L+ 
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  +          +L+   C++G        L  M+  G +PD++ Y+  I G     
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D A+ L + + A GC P+ ++Y I++ GLC A+R  +AEDL ++MI +G   +  T+N
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFN 476

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LIN  CK G ++QA+  L +ML     SPD+I+Y+T+IDGL  AG+ D+A+ L N M  
Sbjct: 477 TLINFLCKKGLVEQAIELLKQML-VNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           KG +PN I + ++ + L +  R    +  F  +++  ++ D  ++ A+IS+         
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595

Query: 659 AFEVLKEM 666
           A E L  M
Sbjct: 596 AIEFLAYM 603



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 262/572 (45%), Gaps = 35/572 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           M +   RA ++   R LA  V      + P A  +  ++R L + G + +A  + D++ R
Sbjct: 96  MVAGYCRAGQLESARRLAAAVP-----VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G C P    Y+ +LEA C+          L+++   G   D      +L   C+ G  D
Sbjct: 151 RG-CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEVDKACELIERMDDCNIRLNEKTFC 174
           KAL +  ++   G   + V ++ +L       +WG V    EL+E M       N  TF 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ---ELMEEMVRMACPPNIVTFN 266

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI    +    ++  ++  +M + G   D  MY  II G+CK   L++A ++ + M   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSY 326

Query: 235 GITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G+ P+    + L+   CS E   E   L+ E++ D+D     +  N ++     NG +D+
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDVTFNILVDFFCQNGLVDR 385

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
              LL+ M+         V   M       P+  ++  +IN   K+G +D A+ L + MT
Sbjct: 386 VIELLEQML---------VHGCM-------PDVITYTTVINGFCKEGLIDEAVMLLKSMT 429

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  N   Y  ++ GLC++ R  ++ +L+ +M + G      T N++   LC++  V 
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+ L+++M V G  P +   + +I  L K GK  EA   L  MV +G  P+ + YS+  
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L    R++  +++F +I       D V YN +IS LCK      A +    M++ G +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           P+ +TY +LI G    G + +A   L+ +  K
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 226/552 (40%), Gaps = 86/552 (15%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELI 158
           + YT  P+++  C  G+   AL+V +E+   G      ++ ++L A  + G    A  ++
Sbjct: 121 NAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVL 180

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E +      L+     ++++    +  VDKAL L   +   G   D   Y+ ++ GLC  
Sbjct: 181 EDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMA 240

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
           K+     +L  EM      P                               N +T   N+
Sbjct: 241 KRWGCVQELMEEMVRMACPP-------------------------------NIVTF--NT 267

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L  NG  ++ + +L  M      A+ G           +P+   +  II+ + K+G
Sbjct: 268 LISYLCRNGLFERVHEVLAQM------AEHGC----------TPDIRMYATIIDGICKEG 311

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L +A  +   M   G   NV  YN L+ GLC++ R EE+ ELL EM +        T N
Sbjct: 312 HLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C+   V   + L+ +M V G  P V   T +I   CK G   EA   L  M   
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 459 GFLPDIVCYSAAIGGLIDIKR-----------------------------------VDLA 483
           G  P+ + Y+  + GL   +R                                   V+ A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +EL + +  +GC PD+++Y+ +I GL KA +  EA +L N M+ KG+ P+   Y+ + + 
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             + G I++ +     + +    S D + Y  +I  LC  G  + AI     M   GC P
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRS-DAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610

Query: 604 NRITFMALITGL 615
           N  T+  LI GL
Sbjct: 611 NESTYTILIRGL 622



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++ A+ + +++   GL  PN   YN LL+ LC +   +  E  L EM D     D  T
Sbjct: 311 GHLKVAHEILNRMPSYGL-KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G  D+ + +  +++ HG + D   ++ ++  F K G +D+A  L++ M 
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  + N  ++ +++ G     R   A  L  +M + G   +   ++ +I  LCK   +E
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G+    L +  +  ++ ++  T++ +SI 
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G I++   +                   I   T+  +   ++ +I++L K G+ 
Sbjct: 550 SALSREGRINKVIQMFDN----------------IQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + A+     M   GC+ N   Y  LI GL +   ++E+ E+L E+   G    H 
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 2/197 (1%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L  A R      L   +++  C ++P     LI  L   GLVE+A  L  Q+   G C P
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSP 505

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SY+ +++ L K+   D     L  M + G   +    + +       G+ +K + +F
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + I D     + V ++ ++ +  K GE ++A E +  M       NE T+ +LI G   +
Sbjct: 566 DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625

Query: 184 SRVDKALQLFDKMTKSG 200
             V +A ++  ++   G
Sbjct: 626 GFVKEAQEMLTELCSKG 642


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 285/622 (45%), Gaps = 43/622 (6%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQ----DYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           +YN L+   C+       E RL + +    D  +  + YT + LL+  C++ ++D A  +
Sbjct: 173 TYNTLVAGYCR-------EGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEEL 225

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+I  G   ++  F +++ +  + G  D+A  ++++M  C        +  +I    +
Sbjct: 226 LSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAE 285

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV++AL LFD+M       D   Y+ ++ GLC++ + E A  L + M      PD   
Sbjct: 286 LGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVT 342

Query: 243 LSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL----- 295
            + +I+     G  +  + V E              ++++  L   G +D A  L     
Sbjct: 343 FNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP 402

Query: 296 -----------LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                      L+ + + +   DVG  +  + +  ++ +  +F +II+ L + G +D   
Sbjct: 403 WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGA 462

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            + REMT+ GC  ++ +YN+LI+G   +  ++++ EL + M     K    T N M + L
Sbjct: 463 EVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGL 519

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           CR +    A  LV +M      P     + LI  LC+ G    A      M +   +P++
Sbjct: 520 CRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNV 579

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + YS  I GL D + VD AL+L  D+    C PD + Y+  + GLC+A+R  +A +L  E
Sbjct: 580 IIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRAERWEDAGELILE 636

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           MI K  +P   T+++LIN  C  G ++ A      ML+ E   P+V  Y++LI+G     
Sbjct: 637 MIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYEC-MPNVFIYSSLINGFAEQY 695

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R +DA+ L   M    C P+ I + A + GLC+  R   A      M  K    D   F 
Sbjct: 696 RAEDALQLLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFS 752

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI +        +A EV ++M
Sbjct: 753 MLIGSLCQNGLVDMATEVFEQM 774



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 160/615 (26%), Positives = 281/615 (45%), Gaps = 48/615 (7%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN+Y+ + LL+ LC +   D  E  L EM   G   +  T   ++   C +G  D+A+ 
Sbjct: 200 APNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMG 259

Query: 123 VFNEI----IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           V +++       G +   V++ ++   ++ G V++A  L ++M     + +  ++  ++ 
Sbjct: 260 VLDQMSKCRCTRGVI---VYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMK 313

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  +  R + A  L   M +     D   ++ +I  LC    ++ A+++  +M   G  P
Sbjct: 314 GLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKP 373

Query: 239 DFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D    S L+ + S+ G     L LL    W+       T+   S+++ L      D    
Sbjct: 374 DNFTYSALVNALSERGCVDDALELLRTIPWKPN-----TVCYRSVLKGLCRADRWDDVGK 428

Query: 295 LLQAMIKGE------------------PIADVGVEMLM-IFKGTVSPNTSSFDIIINTLL 335
           L+  MI+ +                   + D G E+L  + K   SP+   ++ +IN   
Sbjct: 429 LVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFS 488

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           ++G +D AL LF+ M+   C +NV  YN ++ GLC + + E++ +L+ EM +    P   
Sbjct: 489 ENGSVDDALELFKNMS---CKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEV 545

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   LC++  V  A+ +  KM      P V   + LI  L       +A + L DM
Sbjct: 546 TFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM 605

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             +   PD +CYSAA+ GL   +R + A EL  ++    C PD V ++I+I+ LC    +
Sbjct: 606 PCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFL 662

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A ++   M+    +P+V  Y+ LING+ +    + A+    ++L      PD I Y+ 
Sbjct: 663 ESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDAL----QLLRNMPCEPDTICYSA 718

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            + GLC A R +DA  L  EM  K C  +  TF  LI  LC+      A   F  M   G
Sbjct: 719 ALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYG 778

Query: 636 MKPDMFVFVALISAF 650
             P+  +  +L++ +
Sbjct: 779 CSPNRKIHSSLVNGY 793



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 273/580 (47%), Gaps = 42/580 (7%)

Query: 24  SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           S+C  + G + +  +I CL  +G VEEA  LFDQ+     C P+ +SYN +++ LC+   
Sbjct: 265 SKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP----CKPDIFSYNTVMKGLCRDGR 320

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSI 140
            +     +  M       D+ T   ++   C+ G  D A+ V  ++  +G   D   +S 
Sbjct: 321 WEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSA 380

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV--LIHGFVKKSRVDKALQLFDKMTK 198
           L+ A S+ G VD A EL+       I     T C   ++ G  +  R D   +L  +M +
Sbjct: 381 LVNALSERGCVDDALELLR-----TIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIR 435

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +    D   + +II  LC+   ++   ++  EM   G +PD  I + LI   S+ G +  
Sbjct: 436 NQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVD- 494

Query: 259 LVKEIWEDRDVNTMTLLCN-SIMRILVSNGSIDQAYN-LLQAMIKGEPIADVGVEMLMIF 316
                      + + L  N S  R +V+       YN +L+ + + E   D G  +  + 
Sbjct: 495 -----------DALELFKNMSCKRNVVT-------YNYMLKGLCRAEQWEDAGKLVAEMV 536

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K    PN  +F  +I+ L + G ++ A+ +F +M +  CM NV +Y+ LI+GL +   ++
Sbjct: 537 KDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVD 596

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ +LL +M     KP     ++  + LCR +    A  L+ +M  +   P     ++LI
Sbjct: 597 DALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILI 653

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC  G    A      M++   +P++  YS+ I G  +  R + AL+L R++    C 
Sbjct: 654 NNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCE 710

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD + Y+  + GLC+A+R  +A +L  EM  K      AT+++LI   C++G +D A   
Sbjct: 711 PDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEV 770

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
             +M      SP+   +++L++G     R D+ + L + M
Sbjct: 771 FEQM-SVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 261/564 (46%), Gaps = 35/564 (6%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
           T L++  C +G+ D A  V       G  D    + L+  + + G      E +      
Sbjct: 106 TLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERMLASLAL 165

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           +   +  T+  L+ G+ ++ R++ A +L   M    FA ++     ++ GLC NK+ + A
Sbjct: 166 SGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDA 222

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            +L SEM  SG  P+      +I S    G  +  + V +           ++ N I+  
Sbjct: 223 EELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISC 282

Query: 283 LVSNGSIDQAYNLLQAMIKGEPI----------------ADVGVEMLMIFKGTVSPNTSS 326
           L   G +++A +L   M     I                 D G  +  + +    P+  +
Sbjct: 283 LAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVT 342

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I+ L   G +D A+ +  +M + GC  + F Y+ L++ L     ++++ ELLR + 
Sbjct: 343 FNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP 402

Query: 387 ESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
              +KP      S+ + LCR  R D VG L +   +R Q +   V    L+I  LC+ G 
Sbjct: 403 ---WKPNTVCYRSVLKGLCRADRWDDVGKL-VAEMIRNQLNLDEVTFG-LIIDCLCQKGL 457

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
                  L +M + G  PDI+ Y++ I G  +   VD ALELF+++    C  +VV YN 
Sbjct: 458 VDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNY 514

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++ GLC+A++  +A  L  EM+    +P+  T++ LI+  C+ G ++ A+    +M  K 
Sbjct: 515 MLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM-PKY 573

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           +  P+VI Y+TLI+GL      DDA+ L N+M    C P+ I + A + GLC+ +R   A
Sbjct: 574 NCMPNVIIYSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDA 630

Query: 625 LVHFRMMKEKGMKPDMFVFVALIS 648
                 M  K   PD   F  LI+
Sbjct: 631 GELILEMIRKNCLPDEVTFSILIN 654



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 11/290 (3%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD-VVGALNLVRKMRVQ 423
           LI  LC + RL+++  +L   E +G      T N++    CR    +  A  ++  + + 
Sbjct: 108 LIKKLCAAGRLDDAERVLGASERAGTADA-VTRNTLVAGYCRAGGRLADAERMLASLALS 166

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G    V +NTL +   C+ G+  +A R + DM    F P+    S  + GL   K  D A
Sbjct: 167 GSADVVTYNTL-VAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKGLCSNKEWDDA 222

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            EL  ++   GC P+ + + +II  LC+      A  + ++M        V  YN +I+ 
Sbjct: 223 EELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISC 282

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             + G +++A+    +M  K    PD+ +Y T++ GLC  GR +DA  L   M  K C P
Sbjct: 283 LAELGRVEEALHLFDQMPCK----PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPP 338

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + +TF  +I+ LC       A+     M + G KPD F + AL++A LSE
Sbjct: 339 DEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNA-LSE 387



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 177/400 (44%), Gaps = 26/400 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L RA R   +  L  ++++++  +     G +I CL   GLV+    +  ++ + G C P
Sbjct: 417 LCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFG-CSP 475

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   YN L+    ++ SVD     L+  ++     +  T   +L+  C + Q++ A  + 
Sbjct: 476 DIIIYNSLINGFSENGSVDDA---LELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLV 532

Query: 125 NEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++ D    +E  FS L+    + G V+ A E+ E+M   N   N   +  LI+G   +
Sbjct: 533 AEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQ 592

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             VD AL+L + M       D   Y   + GLC+ ++ E A +L  EM      PD    
Sbjct: 593 ECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTF 649

Query: 244 SKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-- 299
           S LI +   +G  E    V E+    +      + +S++         + A  LL+ M  
Sbjct: 650 SILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPC 709

Query: 300 --------------IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                          + +   D    +  +F+     + ++F ++I +L ++G +D+A  
Sbjct: 710 EPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATE 769

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F +M+  GC  N  ++++L++G     R++E  +LL  M
Sbjct: 770 VFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN--IDQAM 554
           P  V   ++I  LC A R+ +AE +       G   +V T N L+ G+C++G    D   
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRAGGRLADAER 158

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           +  S  L   SGS DV+TY TL+ G C  GR +DA  L  +M     APN  T   L+ G
Sbjct: 159 MLASLAL---SGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKG 212

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LC       A      M   G  P+   F  +I +         A  VL +M
Sbjct: 213 LCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQM 264


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 244/551 (44%), Gaps = 85/551 (15%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A     RM   N R +   F   +  F KK +    + L ++M   G   +    +V
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I  LC+   ++ A+ +  +M   GI P     + LI                       
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALING--------------------- 167

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
               LCN         G I +A  L   M++               +G   PN  S++ I
Sbjct: 168 ----LCNE--------GKIKEAVELFNEMVR---------------RGH-EPNVISYNTI 199

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN L K G   +A+ +F++M Q GC  +V  YN +ID LC    + ++ E L EM + G 
Sbjct: 200 INGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P  FT N M    C    +  A  L ++M  +   P     T+L+  LCK G   EA  
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARL 319

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M ++G  P+I  Y+A + G    + ++ A ++F  +   GC P V +YNI+I+G C
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC 379

Query: 511 KAQRVAEAEDL-----------------------------------FNEMITKGLIPSVA 535
           K++R+ EA+ L                                   F EM + GL+P++ 
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++L++G+CK G++D+A+  L  M EK+   P+++ +T LI+G+ IAG+ + A  L+++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKL-EPNIVHHTILIEGMFIAGKLEVAKELFSK 498

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +   G  P   T+  +I GL K      A   FR M++ G  P+   +  +I  FL   +
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558

Query: 656 PPLAFEVLKEM 666
              A  ++ EM
Sbjct: 559 SSTAIRLIDEM 569



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 239/501 (47%), Gaps = 37/501 (7%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDC 164
            L  +    Q+   +S+ N++ D   V  +V+S  +L+    +   VD A  ++ +M   
Sbjct: 94  FLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKL 152

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I     TF  LI+G   + ++ +A++LF++M + G   +   Y+ II GLCK     MA
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMA 212

Query: 225 LQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWE------DRDVNTMTLLCN 277
           + ++ +M+ +G  PD    + +I S C D      LV +  E      DR +       N
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDR-----LVNDAMEFLSEMLDRGIPPNVFTYN 267

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIF-----K 317
            ++      G +++A  L + M+  + + D                  E  ++F     K
Sbjct: 268 CMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK 327

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G V PN S+++ +++       ++ A  +F  M + GC   V  YN LI+G C S R++E
Sbjct: 328 G-VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +  LL EM      P   T +++ + LC+      ALN+ ++M   G  P +   ++L+ 
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CKHG   EA + L  M ++   P+IV ++  I G+    ++++A ELF  + A G  P
Sbjct: 447 GFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            +  Y ++I GL K     EA DLF +M   G +P+  +YN++I G+ ++ +   A+  +
Sbjct: 507 TIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566

Query: 558 SRMLEKESGSPDVITYTTLID 578
             M+ K   S ++ T+  L+D
Sbjct: 567 DEMVGKRF-SANLSTFQMLLD 586



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 221/487 (45%), Gaps = 63/487 (12%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  LI  L + G ++EA  LF+++ R G   PN  SYN ++  LCK+ +  + 
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG-HEPNVISYNTIINGLCKTGNTSMA 212

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLV 143
               K+M+  G   D  T   ++   C     + A+   +E++D G +  +VF+   ++ 
Sbjct: 213 VDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG-IPPNVFTYNCMVH 271

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            F   G++++A  L + M   ++  +  T  +L+ G  K+  V +A  +F+ MT+ G   
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           + + Y+ ++ G C  + +  A +++  M   G  P                         
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP------------------------- 366

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                V++  +L N   +    +  +D+A +LL  M                +   ++P+
Sbjct: 367 ----GVHSYNILINGFCK----SRRMDEAKSLLAEM----------------YHKALNPD 402

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T ++  ++  L + G+   AL++F+EM   G + N+  Y+ L+DG C    L+E+ +LL+
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462

Query: 384 EMEESGFKPT--HFT--LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            M+E   +P   H T  +  MF  +  + +V  A  L  K+   G  P ++  T++IK L
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMF--IAGKLEV--AKELFSKLFADGIRPTIRTYTVMIKGL 518

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K G + EA+     M  +GFLP+   Y+  I G +  +    A+ L  ++       ++
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578

Query: 500 VAYNIII 506
             + +++
Sbjct: 579 STFQMLL 585


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 255/532 (47%), Gaps = 54/532 (10%)

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLV 143
            E R   +Q Y   + +  L  LL   C +G+F+++L     +++ G+  + +  + L+ 
Sbjct: 64  AEARPAHLQSYD--FRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIK 121

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            F  +  ++KA  ++E ++  +   +   +  +I GF K ++++ A Q+ ++M   GF  
Sbjct: 122 GFFNFKNIEKASRVMEILES-HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLP 180

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y+++IG LC  ++L +AL +  ++              L+ +C             
Sbjct: 181 DIVTYNIMIGSLCNRRKLGLALTVLDQL--------------LLDNCMPT---------- 216

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                V T T+L    +   +  G I++A  LL+ M+                +G + P+
Sbjct: 217 -----VITYTIL----IEATIVEGGINEAMKLLEEMLA---------------RGLL-PD 251

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++ II  + K+G ++ A  L   +T  GC  +V  YN L+    N  + +E  +L+ 
Sbjct: 252 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA 311

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G +P   T + +   LCR   +  A+++++ M  +   P       LI  LCK G
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A   +  M+  G LPDIV Y+  +  L      + ALE+F  +   GC P+V +YN
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +IS L      + A  +   MI+KG+ P   TYN LI+  C+ G +++A+  L  M E+
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM-EQ 490

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               P VI+Y  ++ GLC   R DDAI ++ EM EKGC PN  T++ LI G+
Sbjct: 491 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 1/295 (0%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +VF YN +I G C  N++E + ++L  M+  GF P   T N M   LC R+ +  AL ++
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVL 205

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            ++ +    P V   T+LI+     G   EA + L +M+  G LPD+  Y+A I G+   
Sbjct: 206 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             V+ A EL   + + GC PDV++YNI++       +  E E L  EM ++G  P+  TY
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 325

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++LI+  C+ G ID+A+  L  M+EKE  +PD  +Y  LI  LC  GR D AI + + M 
Sbjct: 326 SILISSLCRFGRIDEAISVLKVMIEKEL-TPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             GC P+ + +  ++  LCK      AL  F  ++  G  P++  +  +ISA  S
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 226/477 (47%), Gaps = 66/477 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++YN ++   CK   ++     L  M+  G+  D  T   ++   CN  +   AL+V
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++++                                +D+C   +   T  +LI   + +
Sbjct: 205 LDQLL--------------------------------LDNCMPTVITYT--ILIEATIVE 230

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
             +++A++L ++M   G   D   Y+ II G+CK   +E A +L + +   G  PD   +
Sbjct: 231 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISY 290

Query: 241 EILSKLITSCS--DEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            IL +   +    DEGE   LV E++    + +  T ++L +S+ R     G ID+A ++
Sbjct: 291 NILLRAFLNQGKWDEGE--KLVAEMFSRGCEPNKVTYSILISSLCRF----GRIDEAISV 344

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ MI+ E                ++P+T S+D +I+ L K+G+LDLA+ +   M   GC
Sbjct: 345 LKVMIEKE----------------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + ++  YN ++  LC +    ++ E+  ++   G  P   + N+M   L    D   AL 
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448

Query: 416 LVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           +V  M  +G +P  + +N+ LI  LC+ G   EA   L DM Q GF P ++ Y+  + GL
Sbjct: 449 MVPAMISKGIDPDEITYNS-LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             ++R+D A+ +F ++   GC P+   Y ++I G+  A    EA +L N + ++ +I
Sbjct: 508 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 211/471 (44%), Gaps = 55/471 (11%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK  +   +L     +   G TPD  + +KLI             K  +  +++   +  
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLI-------------KGFFNFKNIEKAS-- 133

Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPI-ADVGVEMLMIFKGTVSPNTSSFDIIIN 332
              +M IL S+   D  AYN ++    K   I A   V   M  +G + P+  +++I+I 
Sbjct: 134 --RVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFL-PDIVTYNIMIG 190

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           +L    KL LAL++  ++    CM  V  Y  LI+       + E+ +LL EM   G  P
Sbjct: 191 SLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 250

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N++ R +C+   V  A  L+  +  +G EP V    +L++     GK  E  + +
Sbjct: 251 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G  P+ V YS  I  L    R+D A+ + + +      PD  +Y+ +IS LCK 
Sbjct: 311 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------ 560
            R+  A  + + MI+ G +P +  YN ++   CK+GN +QA+   +++            
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430

Query: 561 ----------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
                                 +  +   PD ITY +LI  LC  G  ++AI L ++ME+
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            G  P  I++  ++ GLCK  R   A+  F  M EKG +P+   ++ LI  
Sbjct: 491 SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 2/302 (0%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++  C + +  ES   L  +   G+ P       + +     +++  A  ++  +    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            EP V     +I   CK  +   A + L  M   GFLPDIV Y+  IG L + +++ LAL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +   +    C P V+ Y I+I        + EA  L  EM+ +GL+P + TYN +I G 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G +++A   ++ +  K    PDVI+Y  L+      G+ D+   L  EM  +GC PN
Sbjct: 263 CKEGMVERAAELITSLTSK-GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           ++T+  LI+ LC+  R   A+   ++M EK + PD + +  LISA   E    LA  ++ 
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 381

Query: 665 EM 666
            M
Sbjct: 382 YM 383



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 2/337 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++N   K GK + +L     +   G   +V L   LI G  N   +E++  ++ E+ ES 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P  F  N++    C+   +  A  ++ +M+ +G  P +    ++I  LC   K   A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             L  ++ +  +P ++ Y+  I   I    ++ A++L  ++ A G  PD+  YN II G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK   V  A +L   + +KG  P V +YN+L+  +   G  D+    ++ M  +    P+
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPN 321

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
            +TY+ LI  LC  GR D+AI +   M EK   P+  ++  LI+ LCK  R   A+    
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 381

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M   G  PD+  +  +++A     N   A E+  ++
Sbjct: 382 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R    VG     R   +Q ++    H   L+   CK GK  E+  FL  +V +G+ PD++
Sbjct: 55  RNSPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVI 114

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +  I G  + K ++ A  +   + +H   PDV AYN +ISG CK  ++  A  + N M
Sbjct: 115 LCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNQIEAATQVLNRM 173

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G +P + TYN++I   C    +  A+  L ++L  ++  P VITYT LI+   + G 
Sbjct: 174 KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL-LDNCMPTVITYTILIEATIVEGG 232

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            ++A+ L  EM  +G  P+  T+ A+I G+CK      A      +  KG +PD+  +  
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 646 LISAFLSE 653
           L+ AFL++
Sbjct: 293 LLRAFLNQ 300



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 182/386 (47%), Gaps = 25/386 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+ +R +    L VL Q ++   C  +      LI      G + EA  L +++   G
Sbjct: 189 IGSLCNRRKLGLALTVLDQ-LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           L +P+ Y+YN ++  +CK   V+     +  +   G   D  +   LL+ + N G++D+ 
Sbjct: 248 L-LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +  E+   G     V +SIL+ +  ++G +D+A  +++ M +  +  +  ++  LI  
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K+ R+D A+ + D M  +G   D   Y+ I+  LCKN     AL+++++++G G  P+
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426

Query: 240 FEILSKLIT---SCSDEGE-LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               + +I+   SC D    L ++   I +  D + +T   NS++  L  +G +++A  L
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITY--NSLISCLCRDGLVEEAIGL 484

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M                 +    P   S++I++  L K  ++D A+ +F EM + GC
Sbjct: 485 LDDM----------------EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC 528

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYEL 381
             N   Y  LI+G+  +    E+ EL
Sbjct: 529 RPNETTYILLIEGIGFAGWRTEAMEL 554



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI CL   GLVEEA  L D +++ G   P   SYN +L  LCK   +D       EM + 
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGF-RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 526

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
           G   ++ T   L++    +G   +A+ + N +     + +  F  L   F
Sbjct: 527 GCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTF 576


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 284/610 (46%), Gaps = 25/610 (4%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLK 90
           L++CL      EEA N+L  ++   G CVPN  SY+ +L+ALC +     ++DL++M  K
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELG-CVPNAVSYSIVLKALCDNSMSQRALDLLQMMAK 256

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
             Q      D    + ++  + N G+  KA S+F+E+   G   + V +++++ A  K  
Sbjct: 257 --QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +DKA  ++ +M     + +  T+  +IHG+    R+ +A ++F +M K G   +    +
Sbjct: 315 AMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCN 374

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             +  LCK+ + + A + +  M   G  PD      L+   + EG    ++  ++     
Sbjct: 375 SFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG-LFNSMKS 433

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           N +   C+ +  IL+             A  K   + D  +    + +  VSP+  ++  
Sbjct: 434 NGIAANCH-VFTILI------------HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+T  + G+L  A+  F +M   G   N  +Y+++I G C    L ++ EL+ EM   G
Sbjct: 481 VISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 390 F-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             +P     +S+   LC+   V+ A ++       G  P V     LI   C  GK  +A
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F+ L  M   G  PDIV Y+  + G     R++  L LFR++   G  P+ V Y I+++G
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L +A R   A   F+EMI  G   +V+ Y +++ G C++   D+A++   + L   +   
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK-LGTMNVKF 719

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
            +    T+I+ +    R ++A  L+  +   G  PN  T+  +I  L K      A   F
Sbjct: 720 SITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMF 779

Query: 629 RMMKEKGMKP 638
             M++ G+ P
Sbjct: 780 SSMEKSGIVP 789



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 243/559 (43%), Gaps = 98/559 (17%)

Query: 189 ALQLFDKMTKSGFASDAAM-----YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           AL LF+++ +    +  A+     Y++++   C+ ++ ++ L L+  +  +G+  D +I 
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMD-QIT 194

Query: 244 SKLITSC-----SDEGELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           +  +  C       E  + +L+  + E   V N ++   + +++ L  N    +A +LLQ
Sbjct: 195 ANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSY--SIVLKALCDNSMSQRALDLLQ 252

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M K                G  SP+  ++  +I+    +G+   A SLF EMT+ G   
Sbjct: 253 MMAKQ--------------GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKP 298

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  YN +ID LC +  ++++  +LR+M   G +P   T + M         +  A  + 
Sbjct: 299 DVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMF 358

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV------------ 465
           R+M+ +G  P +      +  LCKHG++ EA  F   M  +G  PDI             
Sbjct: 359 REMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASE 418

Query: 466 -CYSAAIGGLIDIKR----------------------VDLALELFRDICAHGCCPDVVAY 502
            C++  IG    +K                       VD A+ +F ++   G  PDVV Y
Sbjct: 419 GCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           + +IS   +  R+ +A + FN+M+ +G+ P+ A Y+ +I G+C  G + +A   +S M+ 
Sbjct: 479 STVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN 538

Query: 563 KESGSPD-----------------------------------VITYTTLIDGLCIAGRPD 587
           K    PD                                   VIT+ +LIDG C+ G+ D
Sbjct: 539 KGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMD 598

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  + + ME  G  P+ +T+  L+ G  K  R    L  FR M+ KG+KP+   +  ++
Sbjct: 599 KAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658

Query: 648 SAFLSELNPPLAFEVLKEM 666
           +          A +   EM
Sbjct: 659 AGLFRAGRTVAARKKFHEM 677



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 202/484 (41%), Gaps = 71/484 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I    ++G ++EA  +F ++K+ GL +PN  + N  L +LCK             M   
Sbjct: 341 MIHGYATLGRLKEAAKMFREMKKRGL-IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAK 399

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   D ++   LL  Y + G F   + +FN +  +G     HVF+IL+ A++K G VD A
Sbjct: 400 GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDA 459

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +   M    +  +  T+  +I  F +  R+  A++ F++M   G   + A+Y  II G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQG 519

Query: 215 LCKNKQLEMALQLYSEMKGSGIT-PDFEILSKLITSCSDEG------ELTLLVKEIWEDR 267
            C +  L  A +L SEM   GI  PD    S +I S   +G      ++  L  +I E  
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERP 579

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-------------------IKGEPIADV 308
            V T     NS++      G +D+A+ +L AM                    K   I D 
Sbjct: 580 GVITF----NSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIND- 634

Query: 309 GVEML--MIFKGTVSPNTSSFDIIINTLLKDGKL-------------------------- 340
           G+ +   M  KG V PNT ++ I++  L + G+                           
Sbjct: 635 GLTLFREMQRKG-VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 341 ---------DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                    D A+ LF+++  +    ++ + N +I+ +    R EE+ EL   +  SG  
Sbjct: 694 GGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLL 753

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T   M   L +   V  A N+   M   G  P  +    +I+ L + G+  +A  +
Sbjct: 754 PNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813

Query: 452 LTDM 455
           L+ +
Sbjct: 814 LSKV 817



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 162/376 (43%), Gaps = 28/376 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G+V++A ++F +++++G+  P+  +Y+ ++    +   +     +  +M   
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVS-PDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G   +    + ++Q +C  G   KA  + +E+I+ G     +  FS ++ +  K G V  
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A ++ +   D   R    TF  LI G+    ++DKA ++ D M   G   D   Y+ ++ 
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G  KN ++   L L+ EM+  G+ P+      ++      G      K+  E   + + T
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM--IESGT 682

Query: 274 LLCNSIMRILVS----NGSIDQAYNLLQ-------------------AMIKGEPIADVGV 310
            +  SI  I++     N   D+A  L Q                   AM K +   +   
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
               I    + PN S++ ++I  LLKDG ++ A ++F  M + G +    L N +I  L 
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802

Query: 371 NSNRLEESYELLREME 386
               + ++   L +++
Sbjct: 803 EKGEIAKAGNYLSKVD 818



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 4/230 (1%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           PG + F  LI     VG +++A  + D ++  G+  P+  +YN LL+   K+  ++    
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV-EPDIVTYNTLLDGYFKNGRINDGLT 637

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFS 146
             +EMQ  G   +  T   +L     +G+   A   F+E+I+ G  V   ++ I+L    
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           +    D+A  L +++   N++ +      +I+   K  R ++A +LF  ++ SG   + +
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            Y V+I  L K+  +E A  ++S M+ SGI P   +L+++I    ++GE+
Sbjct: 758 TYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 8/216 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + +   LF +++R+G+  PN  +Y  +L  L ++        +  EM + G       
Sbjct: 630 GRINDGLTLFREMQRKGV-KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH----VFSILLVAFSKWGEVDKACELIE 159
              +L   C +   D+A+ +F ++   G ++      + + ++ A  K    ++A EL  
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKL---GTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +    +  NE T+ V+I   +K   V+ A  +F  M KSG    + + + II  L +  
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           ++  A    S++ G  I  +    S +++  S +G+
Sbjct: 806 EIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 163/580 (28%), Positives = 261/580 (45%), Gaps = 29/580 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           GF+  C+     VE  + L  Q ++  + +PN  S+N L+  L K   VD+        +
Sbjct: 159 GFVKACVSQNMFVEAIDFLL-QTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFK 217

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVD 152
            +G  +++YT T +++  C  G ++  + VF+E+ + G  D+ + ++  +    K    D
Sbjct: 218 SFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSD 277

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
               +++     N  +++  +  +I GF  ++++D+A  +F +M K G   D  +Y  ++
Sbjct: 278 LGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALV 337

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G C ++  + AL +Y  M   GI  +  I S  I  C DE    L V +++E+      
Sbjct: 338 HGYCNSRNFDKALAVYKSMISRGIKTNCVIFS-CILHCLDEMGRALEVVDMFEE------ 390

Query: 273 TLLCNSIMRILVSNGSID-QAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDII 330
                       S   ID +AYN+L   +      D  V ML   K   +  +   +  +
Sbjct: 391 ---------FKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTL 441

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN     GK   A SLF+EM + G   +V  YN L  G   +    E+ +LL  ME  G 
Sbjct: 442 INGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGV 501

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC------KHGK 444
           +P   T   +   LC    V  A      ++ +  E  V+  T L+   C      K  +
Sbjct: 502 EPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHE 561

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EAF  L  M++    P  V YS     L     ++ A  LF      G  PD V Y I
Sbjct: 562 LKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTI 621

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+G CK   + EA +LF +M  +G+ P   TY ++ING+CK   + +A      M  KE
Sbjct: 622 MINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDM--KE 679

Query: 565 SG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            G  PDVI YT +I GL  +G  + A  L+NEM + G  P
Sbjct: 680 RGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 162/641 (25%), Positives = 277/641 (43%), Gaps = 86/641 (13%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-----EHVFSILLVA----- 144
           +G+ ++  T T ++++ C      K  S+F +IIDH   D       +F  L        
Sbjct: 89  HGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVN 148

Query: 145 -----FSKWGEVDKACE-----------LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
                F+ +    KAC            L++   +  I  N  +F  LI+  VK   VD 
Sbjct: 149 EDHYLFNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDM 208

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL LF +    G   +   Y ++I  LCK    E  ++++ EMK +G+  D    +  I 
Sbjct: 209 ALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIE 268

Query: 249 SC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
               ++  +L   V + +  R+ +       +++R   +   +D+A ++   M K   + 
Sbjct: 269 GLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVP 328

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           DV V   ++     S N                 D AL++++ M   G   N  +++ ++
Sbjct: 329 DVYVYCALVHGYCNSRN----------------FDKALAVYKSMISRGIKTNCVIFSCIL 372

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             L    R  E  ++  E +ESG        N +F  LC+   V  A+ ++ +++    +
Sbjct: 373 HCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLD 432

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL-ALE 485
             +KH T LI      GK +EA     +M + GF PD+V Y+    G     R D  A++
Sbjct: 433 VDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFR-NRTDFEAMD 491

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L   + + G  P+   + III GLC A +V EAE+ FN +  + +  SV  Y  L+NG+C
Sbjct: 492 LLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYC 551

Query: 546 ------KSGNIDQAMLCLSRMLE----------------------------------KES 565
                 KS  + +A + L  MLE                                     
Sbjct: 552 EAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTG 611

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            +PD +TYT +I+G C      +A  L+ +M+E+G  P+ +T+  +I G CK +  R A 
Sbjct: 612 FTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAH 671

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F+ MKE+G+KPD+  +  +I   L+  +  +AF++  EM
Sbjct: 672 ELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 284/605 (46%), Gaps = 37/605 (6%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+ +  PN ++YN L+  L K   +        EM       ++ T   L+  +C+ G F
Sbjct: 72  RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           ++AL + + +   G   DE  +  LL   SK  + D A  L+ER+    + +  + +  +
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K   +D++LQL D M K G + D   + V+I G CK  +++ A ++  +M  +G+
Sbjct: 192 IDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGL 251

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT--------LLCNSIMRILVSNGS 288
            P++ I + LI +   +G++T    E +  R+  TMT         +CN ++  L   G 
Sbjct: 252 APNYVIYATLIYNSCKKGDIT----EAF--RNYATMTRTGHDVDYFICNVLISSLCRAGR 305

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +A + ++ M   +                ++PN+ +FD IIN     G    A S+F 
Sbjct: 306 VAEAEDFMRHMSTID----------------LAPNSITFDCIINGYGILGDALKAFSMFD 349

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM ++G   + F Y +L+ GLC    L E+ +LL ++            N++    C+R 
Sbjct: 350 EMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRG 409

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL-PDIVCY 467
            +  A+ L  +M      P      +++  L + GK + A  F    +  G L P+ V Y
Sbjct: 410 KLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMY 469

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++   GL  + + + A  ++ ++   G  PD +A N ++ G  +  ++ + E LF +M +
Sbjct: 470 TSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQS 529

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLC--LSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             L PS+ATYN+L++G+ K  ++   + C     ++ +   SPD +T  ++I GLC +G 
Sbjct: 530 GSLTPSLATYNILLHGYSKKKDL---LKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGM 586

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D    +  +M  +    +++T   LIT  C+ D+   A     +    G+ PD+  + A
Sbjct: 587 LDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNA 646

Query: 646 LISAF 650
           + +  
Sbjct: 647 IFTGL 651



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 266/573 (46%), Gaps = 30/573 (5%)

Query: 3   SILSRARRIAPLRVLAQDVVK--SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           S L RA R+A     A+D ++  S   ++P ++ F  +I   G +G   +A  +FD++ +
Sbjct: 298 SSLCRAGRVAE----AEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIK 353

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G C P++++Y  LL+ LCK  ++   +  L ++       D      +L   C  G+  
Sbjct: 354 LGHC-PSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLS 412

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIER-MDDCNIRLNEKTFCVL 176
            A+++F E++    + D H ++I+L   S+ G++  A    E+ +    +  N+  +  L
Sbjct: 413 DAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSL 472

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
             G  K  + + A  ++++M   G   D    + ++ G  +  ++E   +L+ +M+   +
Sbjct: 473 FDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSL 532

Query: 237 TPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           TP     + L+   S + +L    K   I     ++   L C+SI+  L  +G +D  + 
Sbjct: 533 TPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFK 592

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L+ MI  + + D                  + +++I    +  K+  A  L      +G
Sbjct: 593 MLKKMIMEDTLVD----------------QLTLNMLITNSCETDKMGKAFDLLNIKNLLG 636

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V  YN +  GL  ++ L ES+ LL +M E G  PT     S+   +CR  D+ GA 
Sbjct: 637 IIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAF 696

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L  +M   G   W    + +++ L + GK  EA   L  M+Q+  +P +  ++  +  L
Sbjct: 697 RLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHML 756

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               ++  AL+L   +  +G   DVVAYN++ISGLC       A +L+ EM  +GL P+ 
Sbjct: 757 CKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNT 816

Query: 535 ATYNLLINGWCKS-GNIDQAMLCLSRMLEKESG 566
            TY  LI+    + G +++ +L      EK  G
Sbjct: 817 TTYCTLIDAISTNEGEVEERLLVYLEQFEKLVG 849



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 246/564 (43%), Gaps = 23/564 (4%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M+  G+     T   +L   C  G++  A  + + +   G   D   +++L+    K   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
             K   L+++M    I  NE T+  LI+G +K+ ++  A ++F++M     + +   Y++
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I G C     E AL+L   M+  G+ PD      L++  S   +  +  K + E   ++
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDI-AKSLMERIRMS 179

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG---EPIADVGVEML-MIFKGTVSPNTSS 326
            M +                  Y    AMI G     + D  +++L M+FK   SP+  +
Sbjct: 180 GMVV-----------------GYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIIT 222

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F ++IN   K GK+  A  +  +M + G   N  +Y  LI   C    + E++     M 
Sbjct: 223 FSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMT 282

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            +G    +F  N +   LCR   V  A + +R M      P       +I      G A+
Sbjct: 283 RTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDAL 342

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +AF    +M++ G  P    Y + + GL     +  A +L   +       D   YN I+
Sbjct: 343 KAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTIL 402

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           S  CK  ++++A  LF EM+   ++P   TY +++ G  + G +  A+L   + L + + 
Sbjct: 403 SETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTL 462

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SP+ + YT+L DGL   G+ + A  ++ EME KG  P+ I   A++ G  +  +      
Sbjct: 463 SPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEK 522

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F  M+   + P +  +  L+  +
Sbjct: 523 LFIKMQSGSLTPSLATYNILLHGY 546



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 161/674 (23%), Positives = 288/674 (42%), Gaps = 59/674 (8%)

Query: 20  DVVKS---RCFMSPGALGF-----LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           D+ KS   R  MS   +G+     +I  L   GL++E+  L D + ++G   P+  +++ 
Sbjct: 167 DIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDG-ASPDIITFSV 225

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           L+   CK+  +   +  + +M   G   +      L+   C  G   +A   +  +   G
Sbjct: 226 LINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTG 285

Query: 132 W-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
             VD  + ++L+ +  + G V +A + +  M   ++  N  TF  +I+G+       KA 
Sbjct: 286 HDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAF 345

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            +FD+M K G       Y  ++ GLCK   L  A +L  ++       D  I + +++  
Sbjct: 346 SMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSET 405

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
              G+L+  V    E    N   +L +S    ++  G + +   ++ A++  E       
Sbjct: 406 CKRGKLSDAVALFGEMVQFN---VLPDSHTYAIILAG-LSRKGKMVPALLFFEKA----- 456

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
               + +GT+SPN   +  + + L K G+ + A  ++ EM   G   +    N ++DG  
Sbjct: 457 ----LARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYS 512

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              ++E+  +L  +M+     P+  T N +     +++D++        M   G  P   
Sbjct: 513 RMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKL 572

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               +I  LCK G     F+ L  M+ E  L D +  +  I    +  ++  A +L    
Sbjct: 573 TCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIK 632

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PDV  YN I +GL +A  + E+  L ++M+ +G+ P+   Y  LING C+ G+I
Sbjct: 633 NLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDI 692

Query: 551 -----------------------------------DQAMLCLSRMLEKESGSPDVITYTT 575
                                              ++AML L  ML+K    P V T+TT
Sbjct: 693 QGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRL-IPTVATFTT 751

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+  LC   +  +A+ L  +M   G   + + +  LI+GLC      AA   +  MKE+G
Sbjct: 752 LMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811

Query: 636 MKPDMFVFVALISA 649
           + P+   +  LI A
Sbjct: 812 LWPNTTTYCTLIDA 825



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 203/509 (39%), Gaps = 90/509 (17%)

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSNGS 288
           M+GSG  P     + ++  C  +G        I   E + +       N ++  L  N  
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
             + Y LL+ M                 K  ++PN  +++ +IN L+K+ K+  A  +F 
Sbjct: 61  SAKGYLLLKKM----------------RKRMIAPNEFTYNTLINGLMKERKIGGATRVFN 104

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM  +    N   YN LIDG C+    E++  LL  ME  G +P      ++   L +  
Sbjct: 105 EMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLA 164

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
               A +L+ ++R+ G     +  T +I  LCKHG   E+ + L  M ++G  PDI+ +S
Sbjct: 165 KFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFS 224

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY-------------------------- 502
             I G     ++  A E+   +   G  P+ V Y                          
Sbjct: 225 VLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRT 284

Query: 503 ---------NIIISGLCKAQRVAEAED--------------------------------- 520
                    N++IS LC+A RVAEAED                                 
Sbjct: 285 GHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKA 344

Query: 521 --LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             +F+EMI  G  PS  TY  L+ G CK GN+ +A   L + L     + D   Y T++ 
Sbjct: 345 FSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYK-LHHIPAAVDTNIYNTILS 403

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG-MK 637
             C  G+  DA+ L+ EM +    P+  T+  ++ GL +  +   AL+ F     +G + 
Sbjct: 404 ETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLS 463

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+  ++ +L            A  + +EM
Sbjct: 464 PNKVMYTSLFDGLFKVGQSNAASYIYEEM 492


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 275/614 (44%), Gaps = 26/614 (4%)

Query: 46  VEEANMLFDQVKREGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           VE     FD V R     P N ++Y+ LL+ L +S     +E+ L+ M+       +  +
Sbjct: 73  VELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM 132

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERM- 161
           + ++Q Y +SG  +KAL ++  ++        V +   LL    K G ++ A +L + M 
Sbjct: 133 SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML 192

Query: 162 --DDCNIR-LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             D    R ++  + C+++ G  K+ ++++  +L +     G   +   Y+ +I G CK 
Sbjct: 193 EIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKK 252

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLC 276
             +EMA  L+ E+K  G  P  E    +I     +G+   + + + E   R +     + 
Sbjct: 253 GDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVY 312

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+I+     +G I +A   ++ MI      + G +          P+  +++ +I+   +
Sbjct: 313 NTIIDARYKHGHIVKAVETIEGMI------ECGCK----------PDIVTYNTLISGSCR 356

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           DGK+  A  L  +    G M N F Y  LI   C     + +   L EM E G KP   T
Sbjct: 357 DGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVT 416

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++   L    +V  AL +  KM  +G  P      +L+  LCK  K   A   L +M+
Sbjct: 417 YGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML 476

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +  LPD   Y+  + G I    +D A +LF      G  P +V YN +I G CK   + 
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 536

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A    N M  + L P   TY+ +I+G+ K  ++D A      M+ K    P+V+TYT+L
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV-KMKCKPNVVTYTSL 595

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I+G C  G    ++ ++ EM+  G  PN +T+  LI   CK  +   A   F  M     
Sbjct: 596 INGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKC 655

Query: 637 KPDMFVFVALISAF 650
            P+   F  L++ F
Sbjct: 656 VPNDVTFNYLVNGF 669



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 146/602 (24%), Positives = 257/602 (42%), Gaps = 66/602 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++ L   G +EE   L +    +G C+PN   YN L++  CK   +++      E++  
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQG-CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G+     T   ++  +C  G F     +  E+   G  V+  V++ ++ A  K G + KA
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E IE M +C  + +  T+  LI G  +  +V +A QL ++    G   +   Y  +I  
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK    + A     EM   G  PD      L+                           
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG------------------------- 423

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                   LV  G +D A  + + M++     D G+                ++I+++ L
Sbjct: 424 --------LVVAGEVDVALTIREKMLERGVFPDAGI----------------YNILMSGL 459

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K  KL  A  L  EM     + + F+Y  L+DG   +  L+E+ +L     E G  P  
Sbjct: 460 CKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGI 519

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
              N+M +  C+   +  A+  + +M+ +   P     + +I    K      A +   +
Sbjct: 520 VGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFRE 579

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+    P++V Y++ I G      +  +L++FR++ A G  P+VV Y+I+I   CK  +
Sbjct: 580 MVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAK 639

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI------------DQAMLC--LSRM 560
           + +A   F EM+    +P+  T+N L+NG+ K+G               Q+M      RM
Sbjct: 640 LIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRM 699

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +  +  +P    Y +++  LC  G    A+ L N+M  KGC P+ ++F+AL+ G+C   R
Sbjct: 700 IS-DGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758

Query: 621 PR 622
            +
Sbjct: 759 SK 760



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 157/669 (23%), Positives = 288/669 (43%), Gaps = 42/669 (6%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L+R+R  + + V+ +++       +  A+  +I+     GLVE+A  L+  V +     
Sbjct: 103 LLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYF 162

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY-GWG---YDKYTLTPLLQVYCNSGQFDK 119
           P+  + N LL  L K   +++      EM +  G G    D Y+   +++  C  G+ ++
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222

Query: 120 ALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
              +  +    G +   +F + L+  + K G+++ A  L   +         +T+  +I+
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF KK       +L  +M   G   +  +Y+ II    K+  +  A++    M   G  P
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342

Query: 239 DFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D    + LI+    +G+++    LL + + +    N  +     ++      G  D+A N
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY--TPLIHAYCKQGGYDRASN 400

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            L  M +               +G   P+  ++  +++ L+  G++D+AL++  +M + G
Sbjct: 401 WLIEMTE---------------RGH-KPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +  +YN L+ GLC   +L  +  LL EM +    P  F   ++     R  ++  A 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L      +G  P +     +IK  CK G   +A   +  M +    PD   YS  I G 
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           +    +D A ++FR++    C P+VV Y  +I+G C+   +  +  +F EM   GL+P+V
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG---------- 584
            TY++LI  +CK   +  A      ML  +   P+ +T+  L++G    G          
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKC-VPNDVTFNYLVNGFSKNGTRAISEKGNE 683

Query: 585 -RPDDAIMLWN---EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
            + +   M  N    M   G AP    + +++  LC+    R AL     M  KG  PD 
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743

Query: 641 FVFVALISA 649
             FVAL+  
Sbjct: 744 VSFVALLHG 752



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/557 (22%), Positives = 245/557 (43%), Gaps = 40/557 (7%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E AN LF ++K +G  +P   +Y  ++   CK      ++  L EM   G   +   
Sbjct: 253 GDMEMANGLFIELKLKGF-LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 311

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              ++      G   KA+     +I+ G   + V ++ L+    + G+V +A +L+E+  
Sbjct: 312 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  N+ ++  LIH + K+   D+A     +MT+ G   D   Y  ++ GL    +++
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
           +AL +  +M   G+ PD  I + L++    + +L    LL+ E+  D+ V     +  ++
Sbjct: 432 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML-DQSVLPDAFVYATL 490

Query: 280 MRILVSNGSIDQAYNLLQ---------------AMIKGE----PIADVGVEMLMIFKGTV 320
           +   + NG++D+A  L +               AMIKG      + D    +  + K  +
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  ++  +I+  +K   LD A  +FREM ++ C  NV  Y +LI+G C    L  S +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           + REM+  G  P   T + +    C+   ++ A +   +M +    P       L+    
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 441 KHG--------------KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           K+G              K      F   M+ +G+ P    Y++ +  L        AL+L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              + + GC PD V++  ++ G+C   R  E +++ +  + +  +     Y+ +++ +  
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLP 790

Query: 547 SGNIDQAMLCLSRMLEK 563
            G   +A + L  M E+
Sbjct: 791 QGT-SEASVILQTMFEE 806


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 283/633 (44%), Gaps = 38/633 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  S   LL    +  S         EM+  G+  D +    L+      G  + A+ 
Sbjct: 154 VPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVR 213

Query: 123 VFNEI----IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           +F+E+    ID    D+ V+++ + A  K G+  +A  ++  M +      + T+  ++ 
Sbjct: 214 LFDEMPGAEIDP---DQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVD 270

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
             VK  R+++AL++ D+M  +G   D  +   ++ G C  +++  AL L+ E    GI P
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWED-RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              +   LI  C   G    + ++ +E  R +    LL ++    LV  G ++       
Sbjct: 331 TKVMYGVLIRGCDQVG----MTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR-RWKD 385

Query: 298 AMIKGEPIADVGV--------------------EMLMIF----KGTVSPNTSSFDIIINT 333
           A+   E +AD G+                    E L +F    K  V P+ ++++ ++  
Sbjct: 386 AVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K G +D A+ L+ EM   G   NV  Y  L+ G       + +Y LL EM+++G    
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +T N +   +C    V     +++    +G  P +     +I    K G    AF    
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M ++G  P+I+ Y++ I G       D+AL++  D+   G  PD+VAYN +I+G C+  
Sbjct: 566 QMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG 625

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            ++ A  L   ++  GL P+   YN LI G+ K+ N+ + +      + K     D  TY
Sbjct: 626 NMSHALQLLVILLKDGLAPNTVVYNSLITGY-KNLNMMKEVSKFYESMIKGGIVADTSTY 684

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           TTLIDG    G    A+ L++EM  KG  P+  TF AL  GLC+      A      M+ 
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRR 744

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             ++P++F++  LI+ +L +     AF +  EM
Sbjct: 745 LDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 255/585 (43%), Gaps = 54/585 (9%)

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
           +++Y  +++ L K+  ++       EM+D G   D    T L++ YC   +   AL++F 
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321

Query: 126 EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           E +  G V   V + +L+    + G   KA EL  +M    +  +     +++ G +   
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR 381

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R   A+ LF++M  SG   D   Y+ +I   C+  +L  AL L+  MK +G+ P      
Sbjct: 382 RWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS----- 435

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                                   +NT     NS++      G +D+A  L   M    P
Sbjct: 436 ------------------------INTY----NSLLMGYCKKGCMDEAVKLYSEM----P 463

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           +          FK    PN  ++  ++   +     D A +L  EM Q G   N + YN 
Sbjct: 464 MEG--------FK----PNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNV 511

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI+G+C  +R+ E   +L+     GF PT  T NS+     +   +  A  + ++MR +G
Sbjct: 512 LINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P +   T  I   C+ G +  A + L D+ + G  PDIV Y+A I G      +  AL
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +L   +   G  P+ V YN +I+G      + E    +  MI  G++   +TY  LI+G+
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGF 691

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
            K GN+  A+   S M+ K    PD  T+T L  GLC +G  D A  L  EM      PN
Sbjct: 692 SKDGNVAFALELYSEMMAK-GYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPN 750

Query: 605 RITFMALITGLCK-CDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              +  LI G  + C    A  +H  M+   G++PD   +  L+S
Sbjct: 751 VFIYNMLINGYLRDCKLQEAFRLHDEML-NMGIQPDDTTYDILVS 794



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 231/518 (44%), Gaps = 58/518 (11%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A   +  M   G   D      ++    +    + AL L+ EM+G G   D  +   L++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 249 SCSDEGELTLLVK--------EIWEDRDVNTM--TLLCN--------------------- 277
           +C  EG     V+        EI  D+ V  +  T LC                      
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 278 ------SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIF 316
                 +++ +LV  G +++A  +   M       DV V                 L +F
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 317 KGT----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
           K T    + P    + ++I    + G    A  L R+MT  G + + F  + ++ GL N 
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R +++  L  EM +SG  P  FT N++    C+   +  ALNL  +M+  G +P +   
Sbjct: 381 RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTY 439

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             L+   CK G   EA +  ++M  EGF P++V Y   + G I  K  D A  L  ++  
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           +G   +   YN++I+G+C   RV E + +    +++G IP++ TYN +ING+ K+G +  
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A     +M EK    P++ITYT+ IDG C  G  D A+ + N++  +G  P+ + + ALI
Sbjct: 560 AFTVYQQMREK-GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALI 618

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            G C+      AL    ++ + G+ P+  V+ +LI+ +
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 195/475 (41%), Gaps = 62/475 (13%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LIR    VG+ ++A  L  Q+  +GL +P+ +  + +L+ L             +EM 
Sbjct: 336 GVLIRGCDQVGMTQKAYELCRQMTGQGL-LPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVD 152
           D G   D +T   L+  +C + +  +AL++F+ +   G     + ++ LL+ + K G +D
Sbjct: 395 DSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L   M     + N  T+  L+ G++ K   D A  L D+M ++G + +   Y+V+I
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513

Query: 213 GGLC-----------------------------------KNKQLEMALQLYSEMKGSGIT 237
            G+C                                   K   +  A  +Y +M+  G+ 
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLP 573

Query: 238 PDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           P+    +  I     T CSD   + L +      R +    +  N+++      G++  A
Sbjct: 574 PNIITYTSFIDGYCRTGCSD---MALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL                +++ K  ++PNT  ++ +I        +      +  M +
Sbjct: 631 LQLL----------------VILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + +   Y  LIDG      +  + EL  EM   G+ P  FT  ++   LCR  D+ G
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           A  L+ +MR     P V    +LI    +  K  EAFR   +M+  G  PD   Y
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 160/396 (40%), Gaps = 69/396 (17%)

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
           P A       M+ +G V    S  D++I T       D AL+LF EM   G   + ++++
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKD-ALALFMEMRGRGYRVDAWMFD 196

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+         E++  L  EM  +   P                            RV 
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQ--------------------------RVY 230

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
                     L I  LCK G    A R L +M + GF      Y   +  L+   R++ A
Sbjct: 231 A---------LAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEA 281

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L +  ++   G   DV+    ++ G C  Q V  A +LF E +  G++P+   Y +LI G
Sbjct: 282 LRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRG 341

Query: 544 WCKSGNIDQAM-LC--------------LSRMLE------------------KESGSPDV 570
             + G   +A  LC              LS +L+                   +SG PDV
Sbjct: 342 CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDV 401

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TY  LI   C A +  +A+ L++ M++ G  P+  T+ +L+ G CK      A+  +  
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M  +G KP++  ++ L+  ++++ +   A+ +L EM
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 226/474 (47%), Gaps = 35/474 (7%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           MD      N  TF  L++GF K+ R     +L + M       +   Y+ ++ GLCK ++
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 221 LEMALQLYSEM--KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
              A +L  +M  +G   TPD    S L++     G+       + E R+          
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGK-------VEESRE---------- 103

Query: 279 IMRILVSNGSIDQA---YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           +++ ++S G    A     ++ ++ K   + +    +  + +    P   +F+ +I+   
Sbjct: 104 LLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCC 163

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           ++  L++A SL ++M   G   +V  YN L+DGLC + RL+E+ +LL  M+ SG  P   
Sbjct: 164 REKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
             +S    LC+   V+ A  ++ +MR   H+P V     ++  LCK GK   A   +  M
Sbjct: 224 AYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283

Query: 456 VQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
              +G   ++V YS  + GL  + R   A  +   +   GC PDVV Y+ +++GLCKA +
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK--------ESG 566
           + EA +   EM  +G  P+  TY  L++G C  G + +A     RM+E+           
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA----ERMVEEMSSGGGGGHHC 399

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            P V TY  LI GLC AGR DDA+  +  M  +GC P+ +++  ++ GL +  R
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 229/470 (48%), Gaps = 27/470 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+  FSK G       L+E M   +I+ N  ++  L+ G  K  R  +A +L   M
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 197 TKSGFAS--DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE 253
              G  S  D   Y  ++ G CK  ++E + +L  E+   G+ PD  + +K++ S C   
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 254 GELTLLVKEIWEDRDVNTMTLLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                L       R     TL+  N+++       +++ A +LLQ M      ADV    
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV---- 187

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                        +++ +++ L K G+L  A  L   M   GC  +V  Y++ + GLC S
Sbjct: 188 ------------VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKH 431
            ++ +++++L +M +S   P   T N++   LC+   +  AL ++ +M    G    V  
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            + ++  LCK G+  EA   +  M + G  PD+V YS+ + GL    +++ A+E  R++ 
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-----PSVATYNLLINGWCK 546
             GC P+ V Y  ++ GLC   R+AEAE +  EM + G       PSV+TYN LI G CK
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCK 415

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           +G ID A+    RM   +   PD ++Y+T+++GL  +GR   A M+ +E+
Sbjct: 416 AGRIDDALKFFQRM-RSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 4/348 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN+ +F+ ++N   K G+      L   M       NV  YN L++GLC   R  E+ EL
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 382 LREMEESGFK--PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +R+M   G +  P   T +++    C+   V  +  L++++  +G  P     T ++  L
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  EA   L +M++ G  P ++ ++  I G    K +++A  L + + A G   DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN ++ GLCKA R+ EAE L   M   G  P V  Y+  + G CKSG +  A   L +
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK-GCAPNRITFMALITGLCKC 618
           M +     P+V+TY T++DGLC +G+ D A+ +  +M    GC  N + +  ++ GLCK 
Sbjct: 248 MRDSHH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R + A      M   G +PD+  + +L++          A E ++EM
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 168/335 (50%), Gaps = 2/335 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG--CMQNVFLYNNLIDGLCNSNRLEE 377
           + PN  S++ ++  L K  +   A  L R+M   G     ++  Y+ L+ G C + ++EE
Sbjct: 41  IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           S ELL+E+   G +P       +   LC+   +  AL L+ +M   G  P +     LI 
Sbjct: 101 SRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLIS 160

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C+      A   L  M   G   D+V Y+  + GL    R+  A +L   + A GC P
Sbjct: 161 GCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DVVAY+  + GLCK+ +V +A  +  +M      P+V TYN +++G CKSG ID A+  +
Sbjct: 221 DVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMM 280

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M   +    +V+ Y+T++DGLC  GR  +A  +   M   GC P+ +T+ +L+ GLCK
Sbjct: 281 EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             +   A+   R M  +G KP+   + +L+    S
Sbjct: 341 AGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCS 375



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 225/475 (47%), Gaps = 27/475 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN+ ++N L+    K       E  L+ M       +  +   LL+  C   ++ +A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 122 SVFNEIIDHGW---VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            +  ++I  G     D   +S LL  + K G+V+++ EL++ +    +R +   +  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K +R+ +AL+L ++M ++G       ++ +I G C+ K LEMA  L  +M  SG+  
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 239 DFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           D    + L+      G L    +  E  +        +  +S +  L  +G +  A+ +L
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGC 355
           + M                      PN  +++ I++ L K GK+D AL +  +M +  GC
Sbjct: 246 EQMRDSHH----------------DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGC 289

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV  Y+ ++DGLC   R +E+  ++  M  +G +P   T +S+   LC+   +  A+ 
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL-----PDIVCYSAA 470
            VR+M ++G +P       L+  LC  G+  EA R + +M   G       P +  Y+A 
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           IGGL    R+D AL+ F+ + + GC PD V+Y+ I+ GL ++ R  +AE + +E+
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 183/444 (41%), Gaps = 62/444 (13%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E   ++ D + R G   P+  +Y+ LL   CK+  V+     LKE+   G   D    T 
Sbjct: 63  EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++   C S +  +AL +  E+I  G     +                             
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLI----------------------------- 153

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI G  ++  ++ A  L  KM  SG  +D   Y+ ++ GLCK  +L+ A Q
Sbjct: 154 -----TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMR 281
           L   MK SG  PD    S  +      G++ L   ++ E       D N +T   N+I+ 
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKV-LDAHQVLEQMRDSHHDPNVVTY--NTILD 265

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +G ID A  +++ M   +                   N   +  +++ L K G+  
Sbjct: 266 GLCKSGKIDTALEMMEQMASSD---------------GCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A S+   M + GC  +V  Y++L++GLC + ++EE+ E +REM   G KP   T  S+ 
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 402 RCLCRRQDVVGALNLVRKMRVQGH-----EPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             LC    +  A  +V +M   G       P V     LI  LCK G+  +A +F   M 
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRV 480
            +G  PD V YS  + GL    R 
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRA 454



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 144/285 (50%), Gaps = 5/285 (1%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M+ +G  P   T N++     ++        L+  M  +  +P V     L++ LCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 445 AMEAFRFLTDMVQEG--FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
             EA   + DM+  G    PD+V YS  + G     +V+ + EL +++ + G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +++ LCK+ R+ EA +L  EMI  G  P++ T+N LI+G C+  N++ A   L +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM-- 178

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             SG   DV+TY TL+DGLC AGR  +A  L   M+  GCAP+ + + + + GLCK  + 
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A      M++    P++  +  ++           A E++++M
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 249/566 (43%), Gaps = 81/566 (14%)

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII------------------DHGWVD 134
           +++   Y   T   +L +  NS ++ K  S  ++++                  D    +
Sbjct: 70  KEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCAN 129

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
             +  +L++A+    E+  ACE+  R+ D   +L+  +   L+   VK +   +   ++ 
Sbjct: 130 ALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYK 189

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M K     +   +++ I GLCK  +L  A  +  ++K  G +P+    + LI     +G
Sbjct: 190 EMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG 249

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                         S G + +A  +L+ M+  +           
Sbjct: 250 ------------------------------SAGKMYRADAILKEMLANK----------- 268

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                + PN  +F+ +I+   KD  +  A + F EM + G   N+  YN+LI+GL N+ +
Sbjct: 269 -----ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L+E+  L  +M   G KP   T N++    C+++ +  A  L   +  Q   P       
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I   CK G   E F     M+ EG  P++  Y+  I GL   + V  A +L  ++  + 
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              DVV YNI+I G CK    ++AE L  EM+  G+ P+  TYN L++G+C  GN+  A+
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
              ++M EKE    +V+TY  LI G C  G+ +DA  L NEM EKG  PNR T+      
Sbjct: 504 KVRTQM-EKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY------ 556

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDM 640
                     +V   M+ EKG  PD+
Sbjct: 557 ---------DVVRLEML-EKGFIPDI 572



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 186/382 (48%), Gaps = 4/382 (1%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S++    LL A++KG    ++      + K  + PN ++F+I IN L K GKL+ A  + 
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE---LLREMEESGFKPTHFTLNSMFRCL 404
            ++   G   N+  YN LIDG C      + Y    +L+EM  +   P   T N++    
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ ++V+ A N   +M+ QG +P +     LI  L  +GK  EA      MV  G  P+I
Sbjct: 284 CKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V ++A I G    K +  A +LF DI      P+ + +N +I   CKA  + E   L N 
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ +G+ P+V+TYN LI G C++ N+  A   L+ M E      DV+TY  LI G C  G
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM-ENYELKADVVTYNILIGGWCKDG 462

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
            P  A  L  EM   G  PN +T+  L+ G C     +AAL     M+++G + ++  + 
Sbjct: 463 EPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYN 522

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI  F        A  +L EM
Sbjct: 523 VLIKGFCKTGKLEDANRLLNEM 544



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 195/456 (42%), Gaps = 53/456 (11%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSK 147
            + +QDYG+     +  PLL       +  +   V+ E+I      +   F+I +    K
Sbjct: 153 FRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCK 212

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK---ALQLFDKMTKSGFASD 204
            G+++KA ++IE +       N  T+  LI G  KK    K   A  +  +M  +    +
Sbjct: 213 AGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPN 272

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              ++ +I G CK++ +  A   + EM+  G+ P+    + LI   S+            
Sbjct: 273 EITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSN------------ 320

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                                NG +D+A  L   M        VG+ +         PN 
Sbjct: 321 ---------------------NGKLDEAIALWDKM--------VGLGL--------KPNI 343

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F+ +IN   K   +  A  LF ++ +   + N   +N +ID  C +  +EE + L   
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M + G  P   T N +   LCR Q+V  A  L+ +M     +  V    +LI   CK G+
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A + L +M+  G  P+ V Y+  + G      +  AL++   +   G   +VV YN+
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           +I G CK  ++ +A  L NEM+ KGL P+  TY+++
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 202/447 (45%), Gaps = 8/447 (1%)

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CNSIMRIL 283
           Q +SE+K    T    I    + +   + EL L   + W  ++      L     ++ +L
Sbjct: 30  QHWSELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQ-WSQKEFRISYGLETTGKVLHLL 88

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS-PNTSSFDIIINTLLKDGKLDL 342
            ++    +  + L  ++K E      V   ++  G     N    D+++   + + ++  
Sbjct: 89  ANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHS 148

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +FR +   G   ++   N L+  L   N   E   + +EM +   +P   T N    
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR---FLTDMVQEG 459
            LC+   +  A +++  ++  G  P +     LI   CK G A + +R    L +M+   
Sbjct: 209 GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P+ + ++  I G    + V  A   F ++   G  P++V YN +I+GL    ++ EA 
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L+++M+  GL P++ T+N LING+CK   I +A      + E++   P+ IT+ T+ID 
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL-VPNAITFNTMIDA 387

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C AG  ++   L N M ++G  PN  T+  LI GLC+    RAA      M+   +K D
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +  LI  +  +  P  A ++L EM
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEM 474



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 178/407 (43%), Gaps = 51/407 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  ++N  +  LCK+  ++  E  +++++ +G+  +  T   L+  +C  G        
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS------- 250

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                                    G++ +A  +++ M    I  NE TF  LI GF K 
Sbjct: 251 ------------------------AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             V  A   F++M + G   +   Y+ +I GL  N +L+ A+ L+ +M G G+ P+    
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346

Query: 244 SKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LI   C  +   E   L  +I E +D+    +  N+++      G +++ + L  +M+
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAE-QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSML 405

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 D G          + PN S+++ +I  L ++  +  A  L  EM       +V 
Sbjct: 406 ------DEG----------IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVV 449

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI G C      ++ +LL EM   G KP H T N++    C   ++  AL +  +M
Sbjct: 450 TYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQM 509

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +G    V    +LIK  CK GK  +A R L +M+++G  P+   Y
Sbjct: 510 EKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 51/357 (14%)

Query: 41  GSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYD 100
           GS G +  A+ +  ++    +C PN  ++N L++  CK  +V   +   +EMQ  G   +
Sbjct: 249 GSAGKMYRADAILKEMLANKIC-PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   L+    N+G+ D+A++++++++  G     V F+ L+  F K   + +A +L +
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFD 367

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            + + ++  N  TF  +I  F K   +++   L + M   G   + + Y+ +I GLC+N+
Sbjct: 368 DIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQ 427

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            +  A +L +EM+   +  D    + LI     +GE +                      
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS---------------------- 465

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                      +A  LL  M+      +VGV+          PN  +++ +++    +G 
Sbjct: 466 -----------KAEKLLGEML------NVGVK----------PNHVTYNTLMDGYCMEGN 498

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           L  AL +  +M + G   NV  YN LI G C + +LE++  LL EM E G  P   T
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 6/208 (2%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           + + I   R L  D+ +    + P A+ F  +I      G++EE   L + +  EG+  P
Sbjct: 355 KKKMIKEARKLFDDIAEQD--LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI-FP 411

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +YNCL+  LC++ +V   +  L EM++Y    D  T   L+  +C  G+  KA  + 
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+++ G    HV ++ L+  +   G +  A ++  +M+    R N  T+ VLI GF K 
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKT 531

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +++ A +L ++M + G   +   YDV+
Sbjct: 532 GKLEDANRLLNEMLEKGLNPNRTTYDVV 559


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 171/646 (26%), Positives = 280/646 (43%), Gaps = 55/646 (8%)

Query: 38  RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           R +G  G +E         +  G      YS+  LL   C++  VD        M   G 
Sbjct: 114 RMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSF--LLHCYCRNGMVDRAVDTFAWMSKMGV 171

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE- 156
               Y  + +L +  +S + D  L  + E+     V E VF+    +F K GEV+K    
Sbjct: 172 SISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFN----SFLKRGEVEKGLNF 227

Query: 157 --------LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                   L+ ++ DCN          ++ G    +++  A   FD M +SG + +   +
Sbjct: 228 HRALVERGLVPKIVDCN---------KILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIW 264
             +I   CK  +L+ A  LY+ M   GI PD  I S LI      G+L    +L    + 
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
             R V    ++ +SIM   V  G + +A  +   M+K                  +SPN 
Sbjct: 339 --RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE----------------GISPNV 380

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I+IN L ++G++  A  +F ++ + G   +V  Y++LIDG C S  L + + L   
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC---- 440
           M   G  P     + +   L R+    G ++   +   Q  +  +  N  L   L     
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQ----GMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +  +  +  +    M     +PD+V Y+  + GL +  R+D AL LF  +   G  PD +
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I G CK +  A    +F  M + G+ P +  YN+LIN + + G ++  +L L R 
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN-VLELLRE 615

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + K    PD++TY T+I G C       AI L+  ++     PN ITF  LI   CK  R
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A++ F  M E+G +P++  +  LI  +    N   AFE+ ++M
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/618 (24%), Positives = 285/618 (46%), Gaps = 33/618 (5%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G   F+       G VE+       +   GL VP     N +L+ LC    + +      
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGL-VPKIVDCNKILKGLCMGNQIGVASDFFD 264

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
            M   G   +  T + L+ VYC   + D+A S++N +I+ G V D  ++SIL+    + G
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++++   L        ++++   F  ++  +V+   + KA++++ +M K G + +   Y 
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYS 384

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE------GELTLLVKE 262
           ++I GLC+N ++  A  ++ ++   G+ P     S LI   C  E      G   +++++
Sbjct: 385 ILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVS 321
                DV   ++L N + R     G +D+A     QA+ +G                 ++
Sbjct: 445 -GHVPDVVVCSMLINGLSR----QGMMDEALRFFFQAVKRG-----------------LT 482

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N   F+ +I+   +  +    L ++  M     + +V  Y  L+ GL    RL+E+  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             ++ + GF P H    ++    C+++D    L + + M+  G  P +    +LI    +
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G        L ++++ G  PDIV Y+  I G   +K    A++LF  +      P+ + 
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           + I+I   CK  R+ +A  +F+ M+ +G  P++ TY+ LI+G+ K+ N + A     +ML
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             +  SP++++Y+ LIDGLC  G  ++A + +     +   P+ I +  LI G CK  R 
Sbjct: 723 -GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781

Query: 622 RAALVHFRMMKEKGMKPD 639
             A++ +  M   G+ PD
Sbjct: 782 AEAMMLYDHMLVNGIMPD 799



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 169/640 (26%), Positives = 290/640 (45%), Gaps = 33/640 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FL+ C    G+V+ A   F  + + G+ + ++Y+ + +L+ L  S  +D++    +EM  
Sbjct: 145 FLLHCYCRNGMVDRAVDTFAWMSKMGVSI-SHYAASEMLDLLIDSDRIDVILENYEEMCK 203

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G G  ++     L+     G+ +K L+    +++ G V + V  + +L       ++  
Sbjct: 204 -GLGVYEFVFNSFLK----RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +  + M       N  TF  LI+ + K+ R+D+A  L++ M + G   D  +Y ++I 
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL-------TLLVKEIWED 266
           GL +  +LE    L+S     G+  D  I S ++ +    G+L       T ++KE    
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GIS 377

Query: 267 RDVNTMTLLCNSIMR---ILVSNGSIDQAY------------NLLQAMIKGEPIAD-VGV 310
            +V T ++L N + R   +L + G   Q              +L+    K E + D  G+
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
             +M+ KG V P+     ++IN L + G +D AL  F +  + G   N +L+N LIDG  
Sbjct: 438 YGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R  +  ++   M      P   T   + + L  +  +  AL L  ++  +G  P   
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI   CK        +    M   G  PDI  Y+  I        V+  LEL R+I
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +G  PD+V YN +I G C  +  ++A  LF  +      P+  T+ +LI+ +CK G +
Sbjct: 617 IKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRM 676

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D AML  S MLE+    P+++TY+ LIDG       + A  L+ +M     +PN +++  
Sbjct: 677 DDAMLIFSSMLER-GPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LI GLCK      A + F+    + + PD+  +  LI  +
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 220/445 (49%), Gaps = 25/445 (5%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWED 266
           I+G L K    + A+ L+ EM+ +GI  D    + LI   S  G      ++    + + 
Sbjct: 62  ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            + N +TL   ++++ L   G I QA +        + +  +G  +  +  GT       
Sbjct: 122 YEPNAITL--TTLIKGLCLKGQIHQALHF------HDKVVALGFHLNKVCYGT------- 166

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
              +IN L K G+   AL L R +       NV +YN +ID +C    + E+++L  EM 
Sbjct: 167 ---LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P   T +++    C    +  A+ L  KM  +   P V   ++L+   CK G+  
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA   L  M+++G  PD+V Y + + G   +K+V+ A  +F  +   G   +V +YNI+I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G CK ++V EA +LF EM  K +IP V TYN LI+G CKSG I  A+  +  M ++  G
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR--G 401

Query: 567 SP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            P D ITY +++D LC   + D AI L  +M+++G  P+  T+  LI GLCK  R + A 
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
             F  +  KG    ++ +  +I  F
Sbjct: 462 NIFEDLLVKGYNITVYTYTVMIQGF 486



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 232/496 (46%), Gaps = 32/496 (6%)

Query: 63  VPNNYSYNCLLEALCK-SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            P  + +  +L +L K +C    + +  +EM+  G   D  T   L+  +   G    + 
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLH-REMEFNGIASDLVTFNILINCFSQLGHTHFSF 111

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           SVF  I+  G+    +  + L+      G++ +A    +++      LN+  +  LI+G 
Sbjct: 112 SVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGL 171

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  +   ALQL  ++       +  MY+ II  +CK K +  A  LYSEM   GI+PD 
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231

Query: 241 EILSKLITSCSDEGELT----LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
              S LI+     G+L     L  K I E  + DV T ++L +   +     G + +A N
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK----EGRVKEAKN 287

Query: 295 LLQAMIKGEPIADVGV---------------EMLMIF----KGTVSPNTSSFDIIINTLL 335
           +L  M+K     DV                 +   IF    +G V+ N  S++I+IN   
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K  K+D A++LF+EM     + +V  YN+LIDGLC S ++  + +L+ EM + G      
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T NS+   LC+   V  A+ L+ KM+ +G +P +   T+LI  LCK G+  +A     D+
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           + +G+   +  Y+  I G  D    D AL L   +  +GC P+   Y III  L +    
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527

Query: 516 AEAEDLFNEMITKGLI 531
             AE L  EMI +GL+
Sbjct: 528 DMAEKLLREMIARGLL 543



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 182/347 (52%), Gaps = 3/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F  I+ +L+K      A+SL REM   G   ++  +N LI+          S+ 
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKEL 439
           +   + + G++P   TL ++ + LC +  +  AL+   K+   G H   V + TL I  L
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL-INGL 171

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +  +   P++V Y+  I  +  +K V+ A +L+ ++ + G  PDV
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 231

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+ +ISG C   ++ +A  LFN+MI++ + P V T+++L++G+CK G + +A   L+ 
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+ K+   PDV+TY +L+DG C+  + + A  ++N M + G   N  ++  +I G CK  
Sbjct: 292 MM-KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   A+  F+ M  K + PD+  + +LI           A +++ EM
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 163/323 (50%), Gaps = 1/323 (0%)

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           +S F  +  I     +F +  ++  L   N  + +  L REME +G      T N +  C
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +      + ++   +  +G+EP     T LIK LC  G+  +A  F   +V  GF  +
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            VCY   I GL  + +   AL+L R +      P+VV YN II  +CK + V EA DL++
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM++KG+ P V TY+ LI+G+C  G ++ A+   ++M+ +E  +PDV T++ L+DG C  
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI-NPDVYTFSILVDGFCKE 279

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR  +A  +   M ++G  P+ +T+ +L+ G C   +   A   F  M + G+  ++  +
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I+ F        A  + KEM
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEM 362



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 193/394 (48%), Gaps = 20/394 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L  +V  + L  PN   YN +++++CK   V+       EM 
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGK-LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVD 152
             G   D  T + L+  +C  G+ + A+ +FN++I      D + FSIL+  F K G V 
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  ++  M    I+ +  T+C L+ G+    +V+KA  +F+ M + G  ++   Y+++I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVN 270
            G CK K+++ A+ L+ EM    I PD    + LI      G+++  +K + E  DR V 
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              +  NSI+  L  N  +D+A  LL  M       D G++          P+  ++ I+
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKM------KDEGIQ----------PDMYTYTIL 447

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ L K G+L  A ++F ++   G    V+ Y  +I G C+++  +++  LL +ME++G 
Sbjct: 448 IDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGC 507

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            P   T   +   L  + +   A  L+R+M  +G
Sbjct: 508 IPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 2/192 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA  LF ++  + + +P+  +YN L++ LCKS  +      + EM D G  +DK T  
Sbjct: 352 VDEAMNLFKEMHCKNI-IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYN 410

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            +L   C + Q DKA+++  ++ D G   D + ++IL+    K G +  A  + E +   
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
              +   T+ V+I GF      DKAL L  KM  +G   +A  Y++II  L +  + +MA
Sbjct: 471 GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMA 530

Query: 225 LQLYSEMKGSGI 236
            +L  EM   G+
Sbjct: 531 EKLLREMIARGL 542


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 300/635 (47%), Gaps = 26/635 (4%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L   G +  A  +F ++K  G+  P+N +Y  +++   K+ + D       EM +     
Sbjct: 461  LAKTGRLGMAKRVFHELKAMGIS-PDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP 519

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
            D   +  L+ +   +G+ ++A  +F E+ +      +  ++ LL    + G+V +  +L+
Sbjct: 520  DVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLL 579

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            E M+  +   N  T+  ++    K   V+ AL +   MT +G   D + Y+ ++ GL K 
Sbjct: 580  EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKE 639

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLL 275
             +L+ A  ++ +MK   + PD+  +  ++ S    G   E    V+E     D       
Sbjct: 640  DRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSS 698

Query: 276  CNSIMR-ILVSNG---SIDQAYNLLQAMIKGE-----PI---------ADVGVEMLMIFK 317
             +S+M  IL  +G   SI+ A N+  + +  +     PI         A    E++  F+
Sbjct: 699  VHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFE 758

Query: 318  G-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
               VS  T S++ +I  L+ +  +D+A  LF EM ++GC  + F Y+ ++D +  S R+E
Sbjct: 759  NLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE 818

Query: 377  ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            +  ++  EM   G+K T+ T N++   L + + +  A+NL  ++  +G  P       L+
Sbjct: 819  DMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLL 878

Query: 437  KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              L K G   +A     +M++ G  P+   Y+  + G       +   ELF  +   G  
Sbjct: 879  DGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMN 938

Query: 497  PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            PD+ +Y ++I  LC   R+ +    F ++   GL P + TYNLLI+G  KSG +++A L 
Sbjct: 939  PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEA-LS 997

Query: 557  LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            L   +EK+  +P++ TY +LI  L  AG+  +A  ++ E+  KG  PN  T+ ALI G  
Sbjct: 998  LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYS 1057

Query: 617  KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                P  A   +  M   G +P+   ++ L +  L
Sbjct: 1058 VSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 303/663 (45%), Gaps = 42/663 (6%)

Query: 35   FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
              I   G  G   +A   ++ +K +G+ VP+  + N +L  L K+  + + +    E++ 
Sbjct: 421  LFINYHGKSGESLKALKRYELMKSKGI-VPDVVAGNAVLYGLAKTGRLGMAKRVFHELKA 479

Query: 95   YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
             G   D  T T +++    +   D+A+ +F E+I++    D    + L+    K G  ++
Sbjct: 480  MGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNE 539

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            A ++   + + N+   + T+  L+ G  ++ +V + +QL + M  + F  +   Y+ ++ 
Sbjct: 540  AWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLD 599

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------- 265
             LCKN ++  AL +   M  +G  PD    + ++     E  L    +  W         
Sbjct: 600  CLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLD---EAFWMFCQMKKVL 656

Query: 266  DRDVNTMTLLCNSIMR--------------ILVSNGSIDQA--YNLLQAMIKGEPIADVG 309
              D  T+  +  S +R              IL  +  +D++  ++L++ ++K +     G
Sbjct: 657  APDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRD-----G 711

Query: 310  VEMLMIFKGTVSPNTSSFD-----IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
             E  + F   ++ +    D      II  L K  +   A  L ++   +G       YN 
Sbjct: 712  TEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNA 771

Query: 365  LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            LI GL + + ++ + EL  EM+  G  P  FT + +   + +   +   L +  +M  +G
Sbjct: 772  LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831

Query: 425  HEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
            ++  +V +NT+ I  L K     EA      ++ EGF P    Y   + GL+    ++ A
Sbjct: 832  YKSTYVTYNTI-ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890

Query: 484  LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
              LF ++   GC P+   YNI+++G   A    +  +LF  M+ +G+ P + +Y ++I+ 
Sbjct: 891  EALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDT 950

Query: 544  WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
             C  G ++   L   + L      PD+ITY  LI GL  +GR ++A+ L+N+ME+KG AP
Sbjct: 951  LCADGRLNDG-LSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP 1009

Query: 604  NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
            N  T+ +LI  L K  +   A   +  +  KG KP++F + ALI  +    +P  AF   
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAY 1069

Query: 664  KEM 666
              M
Sbjct: 1070 GRM 1072



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/617 (25%), Positives = 266/617 (43%), Gaps = 56/617 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R  G VG V +   +FD ++R+ +   N  ++  +  A+     +    + L  M++ 
Sbjct: 110 LMRAHGRVGDVAQ---VFDLMQRQ-IIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEA 165

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + YT   L+     SG   +A+ V+  +   G V     +S+L++AF K  + +  
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   +R N  ++ + I    +  R+++A ++  KM + G   D     V+I  
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   +L  A  ++ +MK S   PD      L+  C D G+ +  V EIW          
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD-SRSVSEIW---------- 334

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                   L ++G  D                                N  S+   ++ L
Sbjct: 335 ------NALKADGYND--------------------------------NVVSYTAAVDAL 356

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G++D AL +F EM Q G +   + YN+LI G   ++R   + EL   M   G  P  
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T         +  + + AL     M+ +G  P V     ++  L K G+   A R   +
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  PD + Y+  I         D A+++F ++  + C PDV+A N +I  L KA R
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  +F E+    L P+  TYN L+ G  + G + + M  L  M    S  P++ITY 
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM-NSNSFPPNIITYN 595

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T++D LC  G  + A+ +   M   GC P+  ++  ++ GL K DR   A   F  MK K
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-K 654

Query: 635 GMKPDMFVFVALISAFL 651
            + PD      ++ +F+
Sbjct: 655 VLAPDYATVCTILPSFV 671



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 192/457 (42%), Gaps = 59/457 (12%)

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID---QAYNLLQAMIKGEP 304
            +   E  L L +    + R V+T T  CN ++ ++ ++G +    Q ++L+Q  I    
Sbjct: 77  AAADPEEALELFLSVARQPRVVHT-TESCNYMLELMRAHGRVGDVAQVFDLMQRQI---- 131

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                          +  N  +F  +   +  +G L  A      M + G + N + YN 
Sbjct: 132 ---------------IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNG 176

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI  L  S    E+ ++ + M   G  PT  T + +     +R+D    + L+ +M  +G
Sbjct: 177 LIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARG 236

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P V   T+ I+ L + G+  EA+R L  M +EG  PD+V  +  I  L D  R+  A 
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296

Query: 485 ELFRDICAHGCCPD-----------------------------------VVAYNIIISGL 509
           ++F  + A    PD                                   VV+Y   +  L
Sbjct: 297 DVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+  RV EA D+F+EM  KG+IP   +YN LI+G+ K+   ++A+   + M      +P+
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM-NIHGPTPN 415

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
             T+   I+    +G    A+  +  M+ KG  P+ +   A++ GL K  R   A   F 
Sbjct: 416 GYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +K  G+ PD   +  +I       N   A ++  EM
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM 512



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 1/362 (0%)

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G      ++L++    +P   + + + +  +  V   T S + ++  +   G++     +
Sbjct: 64  GDAGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQV 123

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M +     NV  +  +   +     L  +   L  M+E+G     +T N +   L +
Sbjct: 124 FDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVK 183

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A+++ + M   G  P V+  ++L+    K   A      L +M   G  P++  
Sbjct: 184 SGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYS 243

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I  L    R++ A  + R +   GC PDVV   ++I  LC A R+A+A+D+F +M 
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                P   TY  L++    SG+  +++  +   L+ +  + +V++YT  +D LC  GR 
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGD-SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D+A+ +++EM++KG  P + ++ +LI+G  K DR   AL  F  M   G  P+ +  V  
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 647 IS 648
           I+
Sbjct: 423 IN 424


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 213/496 (42%), Gaps = 87/496 (17%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +  L+ A  + G++DKAC  I  M    +  +  T+ V+I    K  R+ +A++ F+ M 
Sbjct: 13  YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +     D   Y+ ++GGLCKN ++  A  L+  M+G+GITP                   
Sbjct: 73  EP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPS------------------ 110

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                     DV   TL+      +       + AY LLQ M   +              
Sbjct: 111 ----------DVTYTTLI-----DVFCKMCQFETAYGLLQLMASRK-------------- 141

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              SP   S+  IIN L K+ K+D A  LF EM   GC  +   YN LI GLC   RL E
Sbjct: 142 --CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHE 199

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +LL  M E+ F+P   T  ++   LC    +  A  L + M  QG  P +  +T+L+ 
Sbjct: 200 AKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVS 259

Query: 438 ELCKHGKAMEAF---------------------------------RFLTDMVQEGFLPDI 464
           +LC   K   A                                  R L  M + G  P++
Sbjct: 260 KLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNV 319

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y+A   GL D K    A   FR +   G  PD+VAYN+++ G CKA R+  AE +   
Sbjct: 320 VTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRY 379

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   GL P++ TYN L+   C+ G ++     L  M+ +    PDV T++TL+ GL   G
Sbjct: 380 MDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR-GRQPDVATWSTLVAGLFRVG 438

Query: 585 RPDDAIMLWNEMEEKG 600
           + D A    N    +G
Sbjct: 439 QVDAAYSFLNLAMSQG 454



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 165/369 (44%), Gaps = 38/369 (10%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           IF     PN  S+  ++  L + GK+D A S   EM +   + +VF YN +ID LC + R
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +  + E    M E    P   T N++   LC+   V  A +L   M   G  P     T 
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI   CK  +   A+  L  M      P +  Y + I GL   ++VD A +LF ++   G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PD V YN +I GLC  QR+ EA+DL   M+     P   T+  LI G C +  I +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAG--RP-------------------------- 586
           + L + + K+  +PD++T+T L+  LCI    RP                          
Sbjct: 237 V-LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELG 295

Query: 587 -----DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                D A  L  +M  +G APN +T+ A   GL        A   FR M E+G++PDM 
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 642 VFVALISAF 650
            +  L+  F
Sbjct: 356 AYNVLVDGF 364



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 215/492 (43%), Gaps = 54/492 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  SY  L++ALC++  +D     + EM       D +T   ++   C + +  +A+
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             F  + +    D   ++ LL    K G V +AC L   M+   I  ++ T+  LI  F 
Sbjct: 66  EFFETMPEP---DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  + + A  L   M     +     Y  II GLCKN++++ A QL+ EMK +G  PD  
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI          L VK+                          + +A +LL  M+ 
Sbjct: 183 TYNTLIHG--------LCVKQ-------------------------RLHEAKDLLTVMV- 208

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          + +  P+  +F  +I  L    ++  A  LF+ M + GC  ++  
Sbjct: 209 ---------------ENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 253

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +  L+  LC   +L  +  ++R           +T   +FR L RR+    A  L++KM 
Sbjct: 254 HTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYT--PIFRELGRRRGFDRAARLLQKMA 311

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G  P V   T   K L    + M A+R    M+++G  PD+V Y+  + G     R+D
Sbjct: 312 RRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLD 371

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           +A ++ R +   G  P++V YN ++   C+  +V    +L + M+++G  P VAT++ L+
Sbjct: 372 MAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 431

Query: 542 NGWCKSGNIDQA 553
            G  + G +D A
Sbjct: 432 AGLFRVGQVDAA 443



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 218/491 (44%), Gaps = 60/491 (12%)

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            DC  + N  ++C L+    +  ++DKA     +M +     D   Y+V+I  LCK +++
Sbjct: 4   QDC--KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A++ +  M      P+ ++++                                N+++ 
Sbjct: 62  SRAIEFFETM------PEPDVVTY-------------------------------NTLLG 84

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  NG + QA +L  +M +G  I               +P+  ++  +I+   K  + +
Sbjct: 85  GLCKNGRVAQACSLFGSM-EGAGI---------------TPSDVTYTTLIDVFCKMCQFE 128

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L + M    C   V+ Y ++I+GLC + +++++Y+L  EM+ +G KP   T N++ 
Sbjct: 129 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 188

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC +Q +  A +L+  M     +P     T LI+ LC   +  EAF     M ++G  
Sbjct: 189 HGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD-VVAYNIIISGLCKAQRVAEAED 520
           PD+V ++  +  L   +++  AL + R+  A   CP+ V+ Y  I   L + +    A  
Sbjct: 249 PDLVTHTVLVSKLCIRRKLRPALSVVRNYPA---CPEAVILYTPIFRELGRRRGFDRAAR 305

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L  +M  +G+ P+V TY     G        +A     RMLE +   PD++ Y  L+DG 
Sbjct: 306 LLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLE-QGIEPDMVAYNVLVDGF 364

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C A R D A  +   M++ G  PN +T+  L+   C+  +  A       M  +G +PD+
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 424

Query: 641 FVFVALISAFL 651
             +  L++   
Sbjct: 425 ATWSTLVAGLF 435



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 120/232 (51%), Gaps = 5/232 (2%)

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+K LC+ GK  +A   + +M +E  +PD+  Y+  I  L   +R+  A+E F  +    
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 73

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PDVV YN ++ GLCK  RVA+A  LF  M   G+ PS  TY  LI+ +CK    + A 
Sbjct: 74  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  M  ++  SP V +Y ++I+GLC   + D A  L+ EM+  GC P+R+T+  LI G
Sbjct: 132 GLLQLMASRKC-SPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHG 190

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LC   R   A     +M E   +PD   F ALI    +      AF + + M
Sbjct: 191 LCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 273/591 (46%), Gaps = 24/591 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF-N 125
           ++Y  L++  C++   DL       +   G           L+  C++ + D+A+ V  +
Sbjct: 157 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLH 216

Query: 126 EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHGFVK 182
            + D G V   + ++ ++ +        +A ++++RM     R +    +F  +IHGF K
Sbjct: 217 RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  V KA  L ++M + G   D   Y+ I+  LCK + ++ A  +  +M   G+ PD   
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336

Query: 243 LSKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + +I   SCS   + +  +      + +    +  NS M  L  +G    A  + Q M 
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG + P+  S+ I+++    +G+     +LF  M   G + N  
Sbjct: 397 T---------------KGHM-PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH 440

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +N LI        ++E+  +  EM+  G +P   T +++    CR   +  A+    +M
Sbjct: 441 CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKR 479
              G EP       LI   C HG  ++A   +++M+ +G   P+IV +S+ I  L +  R
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V  A ++F  +   G  P +V +N +I G C   ++ +A  + + M++ G+ P V TYN 
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L++G+CKSG ID  ++    ML K+   P  +TY+ ++DGL  AGR   A  +++EM + 
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKV-KPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G A +  T+  L+ GLC+ D    A+  F  +     K D+ +   +I+A 
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 284/609 (46%), Gaps = 43/609 (7%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           RC  SP  + F  +I      G V +A  L +++ ++G+  P+  +YN +++ALCK+ ++
Sbjct: 259 RC--SPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGV-EPDVVTYNSIVDALCKARAM 315

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
           D  E+ L++M D G   D  T T ++  Y  SG + ++  +F ++   G +   V F+  
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           + +  K G    A E+ + M       +  ++ +L+HG+  + R      LF  M   G 
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
            ++   ++++I    K   ++ A+ +++EM+G G+ PD    S LI++    G L   ++
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAME 495

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           +  +     +   T++ +S++     +G + +A  L+  M+                KG 
Sbjct: 496 KFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS---------------KGI 540

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN   F  II++L  +G++  A  +F  +  IG    +  +N+LIDG C   ++E+++
Sbjct: 541 PRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 600

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G +P   T N++    C+   +   L L R+M  +  +P     ++++  L
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGL 660

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
              G+   A +   +M+  G   DI  Y   + GL      D A+ LF  + A  C  D+
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 720

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
              N +I+ L K +R  EA DLF  + T GL+P+V+TY ++I+   K G++++A    S 
Sbjct: 721 TILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSS 780

Query: 560 MLEKESGSP------DVIT-------------YTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           M EK   +P      D+I              Y + +DG  I+       +L +    KG
Sbjct: 781 M-EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839

Query: 601 CAPNRITFM 609
               +I F+
Sbjct: 840 KHREQIKFL 848



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 157/623 (25%), Positives = 283/623 (45%), Gaps = 56/623 (8%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQ 93
            ++CL      +EA ++L  ++   G CVPN  SYN ++++LC  S S + ++M  +  +
Sbjct: 197 FLKCLCHAKRTDEAVDVLLHRMSDLG-CVPNAISYNTVIKSLCGDSRSQEALDMVQRMAK 255

Query: 94  DYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
           + G    D  +   ++  +   G+  KA ++ NE++  G   + V ++ ++ A  K   +
Sbjct: 256 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAM 315

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           DKA  ++ +M D  +  +  T+  +IHG+       ++ ++F KMT  G       ++  
Sbjct: 316 DKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSF 375

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           +  LCK+ + + A +++  M   G  PD    S L+   + EG             D+N 
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA----------DMN- 424

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                                 NL  +M      AD         KG V+ N   F+I+I
Sbjct: 425 ----------------------NLFHSM------AD---------KGIVA-NCHCFNILI 446

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G +D A+ +F EM   G   +V  Y+ LI   C   RL ++ E   +M   G +
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFR 450
           P     +S+    C   D+V A  LV +M  +G   P +   + +I  LC  G+ M+A  
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               ++  G  P IV +++ I G   + +++ A  +   + + G  PDVV YN ++SG C
Sbjct: 567 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYC 626

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K+ ++ +   LF EM+ K + P+  TY+++++G   +G    A      M++  + + D+
Sbjct: 627 KSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT-AVDI 685

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TY  L+ GLC     D+AI L++++    C  +      +I  L K  R   A   F  
Sbjct: 686 DTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAA 745

Query: 631 MKEKGMKPDMFVFVALISAFLSE 653
           +   G+ P++  +  +I   L E
Sbjct: 746 ISTSGLVPNVSTYGVMIHNLLKE 768



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 144/275 (52%), Gaps = 9/275 (3%)

Query: 386 EESGFKPTHFTLNS---MFRCLCR-RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           EE+G +    ++++   +  C CR R+  +G     R +R       ++ NT L K LC 
Sbjct: 145 EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFL-KCLCH 203

Query: 442 HGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG--CCPD 498
             +  EA   L   + + G +P+ + Y+  I  L    R   AL++ + +   G  C PD
Sbjct: 204 AKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPD 263

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV++N +I G  K   V++A +L NEM+ KG+ P V TYN +++  CK+  +D+A L L 
Sbjct: 264 VVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLR 323

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M++K    PD +TYT +I G   +G   ++  ++ +M  KG  P  +TF + ++ LCK 
Sbjct: 324 QMVDK-GVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKH 382

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            R + A   F+ M  KG  PD+  +  L+  + +E
Sbjct: 383 GRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 16/306 (5%)

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG-----ALNLVRKMRVQGHE---- 426
           ++++ L  E+   G    +  LN     L R  D V      AL L    R+   E    
Sbjct: 91  DDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 150

Query: 427 --PWVKHNTLLIKELCKHGKAME-AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
             P   H   ++ + C   +  +    F   +++ G     +  +  +  L   KR D A
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 484 LE-LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG--LIPSVATYNLL 540
           ++ L   +   GC P+ ++YN +I  LC   R  EA D+   M  +G    P V ++N +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G+ K G + +A   ++ M++K    PDV+TY +++D LC A   D A ++  +M +KG
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQK-GVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             P+ +T+ A+I G       + +   FR M  KG+ P +  F + +S+         A 
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389

Query: 661 EVLKEM 666
           E+ + M
Sbjct: 390 EIFQYM 395


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 251/513 (48%), Gaps = 22/513 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +  A +L +++   GL VPN  +Y+ L++  CK+ +++       EM+  G     Y+
Sbjct: 159 GNLRSALVLVNEISESGL-VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 217

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L  +L+ Y     +  A ++FN+ ++ G  +   F+ LL    K G++++AC L + +  
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA 277

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  N  ++  +I G  +K  ++ A +++ +M  +GF  +A  + +++ G  K   +E 
Sbjct: 278 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 337

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---NSIM 280
           A  ++  MK + I P    L  +I      G  +   ++++           C   N+I+
Sbjct: 338 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGR-SFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              +  G+I+ A N+ + M       +VG+          +P+T ++  +I+   K   +
Sbjct: 397 DGFIKEGNINLASNVYREM------CEVGI----------TPSTVTYTSLIDGFCKGNNI 440

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           DLAL L  +M + G   ++  Y  LIDG C    ++ ++ELL E+  +G  P  F  NSM
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                   +V  A++L +KM  +G    +K  T LI  L K G+ + A    T+M+ +G 
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LPD   ++  I GL +  + + A ++  D+      P V+ YN +I+G  K   + EA  
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKS-GNIDQ 552
           L +EM+ +GL+P   TY++L+NG  K  GN  +
Sbjct: 621 LHDEMLDRGLVPDNITYDILVNGKFKGDGNFSR 653



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 266/614 (43%), Gaps = 67/614 (10%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++ + +L A  K  ++   E    + +  G   D+   +  + + C       ALS+  E
Sbjct: 41  FTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 100

Query: 127 IIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   GW+  E  F+ ++ A  K G V +A  L + M +C   +N      L+ G+  +  
Sbjct: 101 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 160

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +  AL L +++++SG   +   Y V+I G CKN  +E A + YSEMK  GI      L+ 
Sbjct: 161 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 220

Query: 246 LITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-K 301
           ++     C        +  +  E    N  T   N+++  L   G +++A NL   +I K
Sbjct: 221 ILEGYLKCQSWQNAFTMFNDALESGLANVFTF--NTLLSWLCKEGKMNEACNLWDEVIAK 278

Query: 302 GEPIADVGVEMLMI------------------FKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G     V    +++                       +PN  +F I+++   K G ++ A
Sbjct: 279 GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENA 338

Query: 344 LSLFREM---------TQIGC----------------MQNVFL----------YNNLIDG 368
            S+F  M         T +G                 + N F+          YN +IDG
Sbjct: 339 FSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDG 398

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                 +  +  + REM E G  P+  T  S+    C+  ++  AL L+  M+ +G +  
Sbjct: 399 FIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMD 458

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           +K    LI   CK      A   L ++   G  P+   Y++ I G  ++  V+ A++L++
Sbjct: 459 IKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYK 518

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   D+  Y  +I GL K+ R+  A D+  EM++KG++P    + +LING C  G
Sbjct: 519 KMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKG 578

Query: 549 NIDQAMLCLSRMLEKESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
             + A     ++LE  +G    P V+ Y TLI G    G   +A  L +EM ++G  P+ 
Sbjct: 579 QFENA----RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDN 634

Query: 606 ITFMALITGLCKCD 619
           IT+  L+ G  K D
Sbjct: 635 ITYDILVNGKFKGD 648



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 246/532 (46%), Gaps = 24/532 (4%)

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           +ILL A  +     +A EL  +M    +  +  T  V++   +K+  + +A Q F +   
Sbjct: 9   NILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKA 68

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   D   Y + +  LC       AL L  EM+ +G  P     + +IT+C  EG +  
Sbjct: 69  RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 128

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY----NLLQAMIKGEPIADVGVEMLM 314
            ++   +D  VN     C   M + V+  S+ + Y    NL  A++    I++ G+    
Sbjct: 129 ALR--LKDDMVN-----CGKSMNLAVAT-SLMKGYCMQGNLRSALVLVNEISESGL---- 176

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  ++ ++I+   K+G ++ A   + EM   G   +V+  N++++G      
Sbjct: 177 ------VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            + ++ +  +  ESG     FT N++   LC+   +  A NL  ++  +G  P V     
Sbjct: 231 WQNAFTMFNDALESGLANV-FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I   C+      A +   +M+  GF P+ V ++  + G      ++ A  +F  +    
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P      III GLCKA R  E  DLFN+ +++G +P+   YN +I+G+ K GNI+ A 
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 409

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M E    +P  +TYT+LIDG C     D A+ L N+M+ KG   +   +  LI G
Sbjct: 410 NVYREMCEV-GITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            CK    ++A      ++  G+ P+ F++ ++I+ F +  N   A ++ K+M
Sbjct: 469 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 2/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++P+    +I++  +++      A  L  +M  +G   + F  + ++        + E+ 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +   + +  G +      +     LC + +   AL+L+R+MR  G  P     T +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            K G   EA R   DMV  G   ++   ++ + G      +  AL L  +I   G  P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+++I G CK   + +A + ++EM TKG+  SV + N ++ G+ K  +   A    + 
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L  ESG  +V T+ TL+  LC  G+ ++A  LW+E+  KG +PN +++  +I G C+ D
Sbjct: 241 AL--ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              AA   ++ M + G  P+   F  L+  +  + +   AF +   M
Sbjct: 299 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 278/636 (43%), Gaps = 29/636 (4%)

Query: 40  LGSVGLVEEANMLFDQVK---REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           LGS+   ++ +M +   K    +G+C P+  ++N LL ALC+          L++M++ G
Sbjct: 147 LGSLVKEQKVDMFWSFFKGMLAKGIC-PDVATFNILLNALCERGKFKNAGFLLRKMEESG 205

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
                 T   LL  YC  G++  A  + + +   G  VD   +++ +    +     K  
Sbjct: 206 VYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGY 265

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L++RM    +  NE T+  LI GFV++ +++ A ++FD+M+      ++  Y+ +I G 
Sbjct: 266 LLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGH 325

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR--DVNTMT 273
           C    +  AL+L   M   G+ P+      L+       E  ++   +   R   V    
Sbjct: 326 CTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +   +++  L  NG +++A  LL  M+K                 +V+P+  +F ++IN 
Sbjct: 386 ISYTAMIDGLCKNGMLEEAVQLLDDMLKV----------------SVNPDVVTFSVLING 429

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             + GK++ A  +  +M + G + N  LY+ LI   C    L+E+      M  SG    
Sbjct: 430 FFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVAD 489

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           HFT N +    CR   +  A   +  M   G +P       +I      G A++AF    
Sbjct: 490 HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFD 549

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP---DVVAYNIIISGLC 510
            M   G  P +  Y   + GL     ++ AL+ F  +    C P   D V +N  ++  C
Sbjct: 550 KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL---RCIPNAVDNVIFNTKLTSTC 606

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           ++  +++A  L NEM+T   +P   TY  LI G CK G I  A+L   + +EK   SP+ 
Sbjct: 607 RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNP 666

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
             YT+L+DGL   G    A+ ++ EM  K   P+ + F  +I    +  +          
Sbjct: 667 AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           MK K +  ++  +  L+  +         F + K+M
Sbjct: 727 MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDM 762



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 143/611 (23%), Positives = 269/611 (44%), Gaps = 21/611 (3%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R  +  PN  +YN L+    +   +++      EM  +    +  T   L+  +C +G  
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            +AL + + ++ HG   +E  +  LL    K  E      ++ERM    +R++  ++  +
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K   +++A+QL D M K     D   + V+I G  +  ++  A ++  +M  +G+
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 237 TPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            P+  + S LI +    G L   L    +            CN ++      G +++A  
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            +  M      + +G++          PN+ +FD IIN     G    A S+F +M   G
Sbjct: 512 FMNHM------SRMGLD----------PNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG 555

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              ++F Y  L+ GLC    + E+ +    +        +   N+     CR  ++  A+
Sbjct: 556 HFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAI 615

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL-PDIVCYSAAIGG 473
            L+ +M      P     T LI  LCK GK + A       +++G L P+   Y++ + G
Sbjct: 616 ALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDG 675

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L+       AL +F ++      PD VA+N+II    +  + ++  D+ + M +K L  +
Sbjct: 676 LLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN 735

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           +ATYN+L++G+ K   + +  +    M+ +    PD  ++ +LI G C +   D AI + 
Sbjct: 736 LATYNILLHGYAKRHAMARCFMLYKDMI-RHGFLPDKFSWHSLILGYCQSKSFDVAIKIL 794

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +  +G   +R TF  LIT  C+ +  + A    + M +  + P++  + AL +  +  
Sbjct: 795 RWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRT 854

Query: 654 LNPPLAFEVLK 664
            +   A  VL+
Sbjct: 855 SDFHKAHRVLQ 865



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 172/721 (23%), Positives = 305/721 (42%), Gaps = 70/721 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R  R A   +L + + ++  + +      LI      G +E A  +FD++    L +P
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNL-LP 313

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N+ +YN L+   C + ++      +  M  +G   ++ T   LL     + +F    S+ 
Sbjct: 314 NSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSIL 373

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +   G    H+ ++ ++    K G +++A +L++ M   ++  +  TF VLI+GF + 
Sbjct: 374 ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV 433

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +++ A ++  KM K+G   +  +Y  +I   CK   L+ AL  Y+ M  SG   D    
Sbjct: 434 GKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTC 493

Query: 244 SKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + L+ +    G+L     E + +       D N++T  C  I+    ++G   +A+++  
Sbjct: 494 NVLVATFCRYGKLE--EAEYFMNHMSRMGLDPNSVTFDC--IINGYGNSGDALKAFSVFD 549

Query: 298 AM---------------IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL----KDG 338
            M               +KG  I     E L  F        +  ++I NT L    + G
Sbjct: 550 KMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSG 609

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTL 397
            L  A++L  EM     + + F Y NLI GLC   ++  +  L  +  E G   P     
Sbjct: 610 NLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVY 669

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA--------- 448
            S+   L +      AL +  +M  +  EP      ++I +  + GK  +          
Sbjct: 670 TSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729

Query: 449 --------------------------FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
                                     F    DM++ GFLPD   + + I G    K  D+
Sbjct: 730 KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+++ R I   G   D   +N++I+  C+   + +A +L  +M    +IP+V TYN L N
Sbjct: 790 AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFN 849

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           G  ++ +  +A   L  +LE  SGS P    Y TLI+G+C  G    A+ L +EM+  G 
Sbjct: 850 GLIRTSDFHKAHRVLQVLLE--SGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGI 907

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           + + +   A++ GL    +   A+    +M E  + P +  F  L+  +  E N   A E
Sbjct: 908 SSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE 967

Query: 662 V 662
           +
Sbjct: 968 L 968



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 146/631 (23%), Positives = 280/631 (44%), Gaps = 27/631 (4%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G++EEA  L D + +  +  P+  +++ L+    +   ++  +  + +M   G   +   
Sbjct: 399  GMLEEAVQLLDDMLKVSVN-PDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL 457

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMD 162
             + L+  YC  G   +AL+ +  +   G V +H   ++L+  F ++G++++A   +  M 
Sbjct: 458  YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +  N  TF  +I+G+       KA  +FDKM   G       Y  ++ GLC    + 
Sbjct: 518  RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWED-------RDVNTM 272
             AL+ +  ++      D  I +  +TS    G L+    L+ E+  +          N +
Sbjct: 578  EALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637

Query: 273  TLLCNS---IMRILVSNGSIDQAY---------NLLQAMIK-GEPIADVGVEMLMIFKGT 319
              LC     +  +L+S  +I++           +L+  ++K G   A + +   M+ K  
Sbjct: 638  AGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK-D 696

Query: 320  VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            V P+T +F++II+   + GK      +   M       N+  YN L+ G    + +   +
Sbjct: 697  VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             L ++M   GF P  F+ +S+    C+ +    A+ ++R + ++GH        +LI + 
Sbjct: 757  MLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKF 816

Query: 440  CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            C+  +  +AF  +  M Q   +P++  Y+A   GLI       A  + + +   G  P  
Sbjct: 817  CERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTN 876

Query: 500  VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
              Y  +I+G+C+   +  A  L +EM T G+       + ++ G   S  I+ A+  L  
Sbjct: 877  KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL 936

Query: 560  MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            MLE +   P V T+TTL+   C       A+ L + ME      + + +  LI+GLC   
Sbjct: 937  MLEMQI-IPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANG 995

Query: 620  RPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
               AA   +  MK++ + P+  +++ LI +F
Sbjct: 996  DIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/567 (23%), Positives = 231/567 (40%), Gaps = 91/567 (16%)

Query: 174 CVLIHG-FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           C ++ G  VK+ +VD     F  M   G   D A +++++  LC+  + + A  L  +M+
Sbjct: 143 CNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKME 202

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSNGSID 290
            SG+ P     + L+     +G      + I     + +       N  +  L  +    
Sbjct: 203 ESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSA 262

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           + Y LL+ M                 +  V PN  +++ +I+  +++GK+++A  +F EM
Sbjct: 263 KGYLLLKRM----------------RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEM 306

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +    + N   YN LI G C +  + E+  L+  M   G +P   T  ++   L +  + 
Sbjct: 307 SLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEF 366

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
               +++ +MR+ G        T +I  LCK+G   EA + L DM++    PD+V +S  
Sbjct: 367 GMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVL 426

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAY---------------------------- 502
           I G   + +++ A E+   +   G  P+ + Y                            
Sbjct: 427 INGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGH 486

Query: 503 -------NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
                  N++++  C+  ++ EAE   N M   GL P+  T++ +ING+  SG+  +A  
Sbjct: 487 VADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFS 546

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPD---------------------------- 587
              +M       P + TY  L+ GLCI G  +                            
Sbjct: 547 VFDKM-NSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTST 605

Query: 588 -------DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG-MKPD 639
                  DAI L NEM      P+  T+  LI GLCK  +  AAL+      EKG + P+
Sbjct: 606 CRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPN 665

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
             V+ +L+   L   +   A  + +EM
Sbjct: 666 PAVYTSLVDGLLKHGHARAALYIFEEM 692



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 188/392 (47%), Gaps = 38/392 (9%)

Query: 295 LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L++  ++   + D V    LM F+G ++P+  + ++++ +L+K+ K+D+  S F+ M   
Sbjct: 111 LIRVCLRNRMVGDAVQTFYLMGFRG-LNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAK 169

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V  +N L++ LC   + + +  LLR+MEESG  PT  T N++    C++     A
Sbjct: 170 GICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAA 229

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L+  M  +G    V    + I  LC+  ++ + +  L  M +    P+ + Y+  I G
Sbjct: 230 SQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISG 289

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +   ++++A ++F ++      P+ + YN +I+G C    + EA  L + M++ GL P+
Sbjct: 290 FVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPN 349

Query: 534 VATYNLLIN-----------------------------------GWCKSGNIDQAMLCLS 558
             TY  L+N                                   G CK+G +++A+  L 
Sbjct: 350 EVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLD 409

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            ML K S +PDV+T++ LI+G    G+ ++A  +  +M + G  PN I +  LI   CK 
Sbjct: 410 DML-KVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKM 468

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              + AL  + +M   G   D F    L++ F
Sbjct: 469 GYLKEALNAYAVMNHSGHVADHFTCNVLVATF 500



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 123/558 (22%), Positives = 232/558 (41%), Gaps = 67/558 (12%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+      G +EEA    + + R GL  PN+ +++C++     S           +M  +
Sbjct: 496  LVATFCRYGKLEEAEYFMNHMSRMGL-DPNSVTFDCIINGYGNSGDALKAFSVFDKMNSF 554

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDK 153
            G     +T   LL+  C  G  ++AL  F+ +  I +  VD  +F+  L +  + G +  
Sbjct: 555  GHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNA-VDNVIFNTKLTSTCRSGNLSD 613

Query: 154  ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS-DAAMYDVII 212
            A  LI  M   +   +  T+  LI G  KK ++  AL L  K  + G  S + A+Y  ++
Sbjct: 614  AIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLV 673

Query: 213  GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR----- 267
             GL K+     AL ++ EM    + PD    + +I   S +G+ T  V +I         
Sbjct: 674  DGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGK-TSKVNDILSTMKSKNL 732

Query: 268  --DVNTMTLL------------CNSIMRILVSNGSIDQAYNLLQAMIKG---EPIADVGV 310
              ++ T  +L            C  + + ++ +G +   ++   ++I G       DV +
Sbjct: 733  CFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSW-HSLILGYCQSKSFDVAI 791

Query: 311  EML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
            ++L  +  +G V  +  +F+++I    +  ++  A  L ++M Q   + NV  YN L +G
Sbjct: 792  KILRWITLEGHV-IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNG 850

Query: 369  LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG---H 425
            L  ++   +++ +L+ + ESG  PT+    ++   +CR  ++ GA+ L  +M+  G   H
Sbjct: 851  LIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSH 910

Query: 426  E--------------------------------PWVKHNTLLIKELCKHGKAMEAFRFLT 453
                                             P V   T L+   CK     +A    +
Sbjct: 911  NVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRS 970

Query: 454  DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
             M       D+V Y+  I GL     ++ A +L+ ++      P+   Y ++I   C   
Sbjct: 971  IMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGN 1030

Query: 514  RVAEAEDLFNEMITKGLI 531
               E+E L  ++  + L+
Sbjct: 1031 YQIESEKLLRDIQDRELM 1048



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 3/294 (1%)

Query: 355 CMQNVFLYNNLIDGLCNSNRL-EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           C  N  +++ LI  +C  NR+  ++ +    M   G  P+ +T N +   L + Q V   
Sbjct: 101 CNSNPAVFDLLIR-VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMF 159

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            +  + M  +G  P V    +L+  LC+ GK   A   L  M + G  P  V Y+  +  
Sbjct: 160 WSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNW 219

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                R   A +L   + + G   DV  YN+ I  LC+  R A+   L   M    + P+
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPN 279

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TYN LI+G+ + G I+ A      M    +  P+ ITY TLI G C  G   +A+ L 
Sbjct: 280 EITYNTLISGFVREGKIEVATKVFDEM-SLFNLLPNSITYNTLIAGHCTTGNIGEALRLM 338

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           + M   G  PN +T+ AL+ GL K             M+  G++     + A+I
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMI 392


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 275/584 (47%), Gaps = 39/584 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   S N L++ LC    +   E  L+ ++  G   D  +   L+  YC  G    A  V
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASG-AADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                  G  +   ++ L+  + + G +  A  LI  M    +  +  T+  ++ G    
Sbjct: 173 VEAARASGTANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCA 229

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            + ++A +L  +M ++    +   +   I   C+N  L+ A++L  +M   G TPD  I 
Sbjct: 230 KQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIY 289

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           S L+   S+ G +   +K +      NTM    N++             YN   A +KG 
Sbjct: 290 STLVNGFSEHGRVDEALKLL------NTMLCRPNTV------------CYN---AALKGL 328

Query: 304 PIA----DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            IA    +VG  +  + +    PN ++F  +IN+L ++  ++ A+ +  +M + G M +V
Sbjct: 329 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 388

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +I    +  R +++ +LL+ M     KP   + N++ +CLC+ +    A+ LV K
Sbjct: 389 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 445

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +          +LI  LC++G+  +A      M +   +PDIV YS+ I G  +   
Sbjct: 446 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 505

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            ++A +LFR +    C  D+ +YN  + GLC A R  +A +L  +M+T+  +P+  T+N+
Sbjct: 506 DEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNI 562

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI+  C+ G +++A+    +M  K   +PD+ TY  LI+G    GR DDA+   + M   
Sbjct: 563 LISSLCQKGLVNRAIDVYEQM-PKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP-- 619

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            C P+ I++ +++ GLC+ +R + A      M  K   P+   F
Sbjct: 620 -CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 239/544 (43%), Gaps = 63/544 (11%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C   +   A  V   +   G  D    + L+  + + G +  A  ++E       
Sbjct: 122 LIKKLCARRRLADAERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERVVEAARASGT 181

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  T+  LI G+ +  R+  AL+L   M     A D   Y+ ++ GLC  KQ E A +
Sbjct: 182 -ANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEE 237

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM  +   P+               E+T   +                  +R    N
Sbjct: 238 LMREMIRNSCHPN---------------EVTFATQ------------------IRAFCQN 264

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +D+A  LL+ M K     DV +                +  ++N   + G++D AL L
Sbjct: 265 GLLDRAVELLEQMPKYGCTPDVII----------------YSTLVNGFSEHGRVDEALKL 308

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M    C  N   YN  + GLC + R EE  EL+ EM      P   T +++   LC+
Sbjct: 309 LNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQ 365

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            + V  A+ ++ +M+  G+ P V     +I       +A +A + L  M+ +   PD + 
Sbjct: 366 NRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK---PDTIS 422

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           ++A +  L   KR   A+EL   +    C  + + +NI+I  LC+  +V +A ++F  M 
Sbjct: 423 FNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMP 482

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
               +P + TY+ LING+ + G +D+    L R +   +   D+ +Y   + GLC+A R 
Sbjct: 483 KYRCMPDIVTYSSLINGFSEQG-LDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARW 538

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           DDA  L  +M  + C PN +TF  LI+ LC+      A+  +  M + G+ PD+F + AL
Sbjct: 539 DDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 598

Query: 647 ISAF 650
           I+ +
Sbjct: 599 INGY 602



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           + + + N  ++  +I+   + G+L  AL L   M       + + YN ++ GLC + + E
Sbjct: 177 RASGTANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWE 233

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ EL+REM  +   P   T  +  R  C+   +  A+ L+ +M   G  P V   + L+
Sbjct: 234 QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLV 293

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               +HG+  EA + L  M+     P+ VCY+AA+ GL    R +   EL  ++    C 
Sbjct: 294 NGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+   ++ +I+ LC+ + V  A ++  +M   G +P V +YN +I+ +      D A+  
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKL 410

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L  ML K    PD I++  ++  LC A R  DA+ L  +M +K C  N +TF  LI  LC
Sbjct: 411 LKSMLCK----PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLC 466

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  + + A+  F +M +    PD+  + +LI+ F  +    +AF++ + M
Sbjct: 467 QNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM 516



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 9/304 (2%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI  LC   RL ++  +L  ++ SG      + N++    CR   +  A  +V   R 
Sbjct: 120 NILIKKLCARRRLADAERVLEALKASG-AADAVSHNTLVAGYCRDGSLGDAERVVEAARA 178

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G    V + T LI   C+ G+  +A R +  M      PD   Y+  + GL   K+ + 
Sbjct: 179 SGTANVVTY-TALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQ 234

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A EL R++  + C P+ V +   I   C+   +  A +L  +M   G  P V  Y+ L+N
Sbjct: 235 AEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVN 294

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+ + G +D+A+  L+ ML +    P+ + Y   + GLCIAGR ++   L  EM  K C 
Sbjct: 295 GFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN  TF  LI  LC+      A+     M++ G  PD+  +  +IS F  +     A ++
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKL 410

Query: 663 LKEM 666
           LK M
Sbjct: 411 LKSM 414



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 201/457 (43%), Gaps = 28/457 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  L  ++ R   C PN  ++   + A C++  +D     L++M  YG   D    + 
Sbjct: 233 EQAEELMREMIRNS-CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYST 291

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+  +   G+ D+AL + N ++     +   ++  L      G  ++  ELI  M   + 
Sbjct: 292 LVNGFSEHGRVDEALKLLNTMLCRP--NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N+ TF  LI+   +   V+ A+++ ++M K G+  D   Y+ II       + + AL+
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409

Query: 227 LYSEMKGSGITPDFEILSKLITSCSD-EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           L   M     T  F  + K +         + L+ K + +D  +N MT   N ++  L  
Sbjct: 410 LLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTF--NILIDSLCQ 467

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG +  A  + + M K   + D+                 ++  +IN   + G  ++A  
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDI----------------VTYSSLINGFSEQGLDEMAFD 511

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LFR M    C  ++F YN  + GLC + R +++ EL+ +M      P   T N +   LC
Sbjct: 512 LFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 568

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  V  A+++  +M   G  P +     LI    + G+  +A +FL+ M  E   PD +
Sbjct: 569 QKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTI 625

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            Y++ + GL   +R   A +L  ++    C P+ V +
Sbjct: 626 SYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 171/399 (42%), Gaps = 62/399 (15%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G  EE   L  ++ R+  C PN+ +++ L+ +LC++  V+     L++MQ YG+  D  
Sbjct: 331 AGRWEEVGELIAEMVRKD-CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 389

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           +   ++  + +  + D AL +   ++     D   F+ +L    K      A EL+ +M 
Sbjct: 390 SYNTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKCLCKAKRWYDAVELVAKML 447

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             + R+NE TF +LI    +  +V  A+++F+ M K     D   Y  +I G  +    E
Sbjct: 448 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 507

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           MA  L+  M         +I S                                N+ ++ 
Sbjct: 508 MAFDLFRSMPCRA-----DIFSY-------------------------------NATLKG 531

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L      D A         GE IAD+  E  +       PN  +F+I+I++L + G ++ 
Sbjct: 532 LCMAARWDDA---------GELIADMVTEDCL-------PNEVTFNILISSLCQKGLVNR 575

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ ++ +M + G   ++F YN LI+G     RL+++ + L  M     +P   + NS+ +
Sbjct: 576 AIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILK 632

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEP----WVKHNTLLIK 437
            LCR +    A  LV +M  +   P    +   N L IK
Sbjct: 633 GLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 671


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 226/469 (48%), Gaps = 25/469 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD A+  F++M           ++ I+    K K    A+ L   ++  GI PD   L+ 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 246 LITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G++T    +L K +      +T+TL  N++++ L   G + +A +    ++ 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTL--NTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G ++          N  S+  +IN + K G    A+   R++       +V +
Sbjct: 158 Q------GFQL----------NQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVM 201

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +ID +C    + E+Y L  EM   G      T N++    C    +  A+ L+ +M 
Sbjct: 202 YNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMV 261

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P V    +L+  LCK GK  EA   L  M++    PD++ YS  + G   +  V 
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  +   G  PDV  Y I+I+G CK + V EA +LF EM  K ++P + TY+ LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G CKSG I      +  M  ++ G P DVITY++LIDGLC  G  D AI L+N+M+++ 
Sbjct: 382 DGLCKSGRISYVWDLIDEM--RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             PN  TF  L+ GLCK  R + A   F+ +  KG   +++ +  +I+ 
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 239/523 (45%), Gaps = 22/523 (4%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        + F+ +L +F+K      A  L  R++   I+ +  T  +L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F    ++     +  K+ K G+  D    + +I GLC   Q++ AL  + ++   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             +    + LI      G+    +K +   + R      ++ N+I+  +     + +AY 
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 295 LLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L   M +KG                 +S +  +++ +I      GKL  A+ L  EM   
Sbjct: 221 LFSEMAVKG-----------------ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
               NV+ YN L+D LC   +++E+  +L  M ++  KP   T +++        +V  A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            ++   M + G  P V   T+LI   CK+    EA     +M Q+  +P IV YS+ I G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L    R+    +L  ++   G   DV+ Y+ +I GLCK   +  A  LFN+M  + + P+
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + T+ +L++G CK G +  A      +L K     +V TY  +I+G C  G  ++A+ + 
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ++ME+ GC PN  TF  +I  L K D    A    R M  +G+
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 228/496 (45%), Gaps = 32/496 (6%)

Query: 63  VPNNYSYNCLLEALCK----SCSVDLVE-MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            P    +N +L++  K    S +V L   + LK +Q      D  TL  L+  +C+ GQ 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP-----DLITLNILINCFCHMGQI 110

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
               SV  +I+  G+  + V  + L+      G+V KA    +++     +LN+ ++  L
Sbjct: 111 TFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 170

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+G  K      A++   K+       D  MY+ II  +CK + +  A  L+SEM   GI
Sbjct: 171 INGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGI 230

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           + D    + LI      G+L   +  + E   + +N      N ++  L   G + +A +
Sbjct: 231 SADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 295 LLQAMIKGEPIADV-GVEMLM--------------IFKGT----VSPNTSSFDIIINTLL 335
           +L  M+K     DV     LM              +F       V+P+  ++ I+IN   
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+  +D AL+LF+EM Q   +  +  Y++LIDGLC S R+   ++L+ EM + G      
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +S+   LC+   +  A+ L  KM+ Q   P +   T+L+  LCK G+  +A     D+
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           + +G+  ++  Y+  I G      ++ AL +   +  +GC P+   +  II  L K    
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 516 AEAEDLFNEMITKGLI 531
            +AE L  +MI +GL+
Sbjct: 531 DKAEKLLRQMIARGLL 546



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 154/327 (47%), Gaps = 1/327 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A+S F  M  +     +  +N ++D          +  L   +E  G +P   TLN 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  C C    +    +++ K+  +G+ P       LIK LC  G+  +A  F   ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F  + V Y+  I G+  I     A++  R I      PDVV YN II  +CK Q V+EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF+EM  KG+   V TYN LI G+C  G + +A+  L+ M+ K + +P+V TY  L+D 
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK-TINPNVYTYNILVDA 278

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G+  +A  +   M +    P+ IT+  L+ G       + A   F  M   G+ PD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +  LI+ F        A  + KEM
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEM 365



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 1/173 (0%)

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I+ VD A+  F  +      P ++ +N I+    K +  + A  L + +  KG+ P + T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+LIN +C  G I      L+++L K    PD +T  TLI GLC+ G+   A+   +++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKIL-KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             +G   N++++  LI G+CK    RAA+   R +  +  KPD+ ++  +I A
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDA 208


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 232/495 (46%), Gaps = 35/495 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF +L+H    K  +  AL     M   G + DA  Y+ ++   C+   L  A  L 
Sbjct: 203 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 262

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRI 282
           + MK  G+ P     + L+++ +  G +    K +        + D+ T  +L       
Sbjct: 263 ARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG---- 318

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +D+A+ L   M           E L    GT+ P+  +++ + +   K      
Sbjct: 319 LCQAGKVDEAFRLKDEM-----------ERL----GTLLPDVVTYNTLADACFKCRCSSD 363

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL L  EM + G    +  +N +I GLC    LE +   L +M + G  P   T N++  
Sbjct: 364 ALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIH 423

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK----ELCKHGKAMEAFRFLTDMVQE 458
             C+  ++  A  L+ +M  +G    +K +T  +      LCK  +  EA   L    Q 
Sbjct: 424 AHCKAGNIAKAYTLMDEMVRRG----LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQR 479

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+PD V Y   +         + AL L+ ++      P +  YN +I GL +  R+ EA
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            D  NE++ KGL+P   TYN++I+ +CK G+++ A    ++M+E  S  PDV+T  TL++
Sbjct: 540 IDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVEN-SFKPDVVTCNTLMN 598

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC+ G+ D A+ L+    EKG   + IT+  LI  +CK      AL  F  M+ +G++P
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP 658

Query: 639 DMFVFVALISAFLSE 653
           D F +  ++SA LSE
Sbjct: 659 DAFTYNVVLSA-LSE 672



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 152/599 (25%), Positives = 270/599 (45%), Gaps = 68/599 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN+Y++N L+   C   ++      L  MQ +G   D  T   LL  +C  G   +A ++
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 124 FNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +   G       ++ L+ A+++ G + +A +++E M       +  T+ VL  G  +
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 183 KSRVDKALQLFDKMTKSGF--------------------ASDA----------------A 206
             +VD+A +L D+M + G                     +SDA                 
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKE 262
            ++++I GLCK+ +LE AL   ++M   G+ PD    + LI +    G +    TL+ + 
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +     ++T TL  N+++  L      ++A  LLQ+  +               +G + P
Sbjct: 442 VRRGLKLDTFTL--NTVLYNLCKEKRYEEAQGLLQSPPQ---------------RGFM-P 483

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  S+  ++    K+   + AL L+ EM +     ++  YN LI GL    RL+E+ + L
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            E+ E G  P   T N +    C+  D+  A     KM     +P V     L+  LC +
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK  +A +     V++G   D++ Y+  I  +     VD AL  F D+ A G  PD   Y
Sbjct: 604 GKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N+++S L +A R  EA+++ +++   G +    +  LL     K  ++D+A        E
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL-----KPSSVDEAESGKDAKTE 718

Query: 563 KES--GSPDVIT--YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           +E+     D  +  YT L++GLC +G+  +A  + +EM +KG + +  T++ L+ GL K
Sbjct: 719 EETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 155/653 (23%), Positives = 279/653 (42%), Gaps = 76/653 (11%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD----------LVEMRLKEMQDYGWG 98
           A  L   ++R     P+  + N +L AL +S S            +V +RL         
Sbjct: 150 AAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHP------- 202

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACEL 157
            + YT   L+  +C+ G    ALS  + +   G   + V ++ LL A  + G + +A  L
Sbjct: 203 -NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           + RM    +     T+  L+  + +   + +A ++ + MT +GF  D   Y+V+  GLC+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 218 NKQLEMALQLYSEMKGSG-ITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             +++ A +L  EM+  G + PD   +  L+     C    +   L++E+ E + V    
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMRE-KGVKATL 380

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N +++ L  +G ++ A   L  M      AD G+          +P+  +++ +I+ 
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKM------ADDGL----------APDVITYNTLIHA 424

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K G +  A +L  EM + G   + F  N ++  LC   R EE+  LL+   + GF P 
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             +  ++     +  +   AL L  +M  +   P +     LIK L + G+  EA   L 
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +++++G +PD   Y+  I        ++ A +    +  +   PDVV  N +++GLC   
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ +A  LF   + KG    V TYN LI   CK G++D A+   + M E     PD  TY
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM-EARGLQPDAFTY 663

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGC----------APNRI----------------- 606
             ++  L  AGR ++A  + +++ E G            P+ +                 
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVE 723

Query: 607 --------TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
                    +  L+ GLC   + + A      M +KGM  D   ++ L+   +
Sbjct: 724 NPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLV 776



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 188/431 (43%), Gaps = 41/431 (9%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS----PNTSSFDII 330
           L +S+ R +    S+  A  +L A+ +    +      L  F+  V+    PN  +F+++
Sbjct: 153 LLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQAS--LDAFRSIVALRLHPNHYTFNLL 210

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           ++T    G L  ALS    M   G   +   YN L++  C    L E+  LL  M++ G 
Sbjct: 211 VHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGV 270

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            PT  T N++     R   +  A  +V  M   G EP +    +L   LC+ GK  EAFR
Sbjct: 271 APTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFR 330

Query: 451 FLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
              +M + G  LPD+V Y+         +    AL L  ++   G    +V +NI+I GL
Sbjct: 331 LKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM--------------- 554
           CK   +  A    N+M   GL P V TYN LI+  CK+GNI +A                
Sbjct: 391 CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450

Query: 555 ---------LCLSRMLEKESG----------SPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
                    LC  +  E+  G           PD ++Y T++         + A+ LW+E
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDE 510

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M EK   P+  T+  LI GL +  R + A+     + EKG+ PD   +  +I A+  E +
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGD 570

Query: 656 PPLAFEVLKEM 666
              AF+   +M
Sbjct: 571 LENAFQFHNKM 581



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 175/412 (42%), Gaps = 55/412 (13%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +I+ L   G +E A    +++  +GL  P+  +YN L+ A CK+ ++      + EM  
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLA-PDVITYNTLIHAHCKAGNIAKAYTLMDEMVR 443

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
            G   D +TL  +L   C   ++++A  +       G++ DE  +  ++ A+ K    + 
Sbjct: 444 RGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEP 503

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L + M +  +  +  T+  LI G  +  R+ +A+   +++ + G   D   Y++II 
Sbjct: 504 ALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIH 563

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNT 271
             CK   LE A Q +++M  +   PD    + L+      G+L   +K  E W ++    
Sbjct: 564 AYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV 623

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  N++++ +  +G +D A +           AD+    L        P+  ++++++
Sbjct: 624 DVITYNTLIQTMCKDGDVDTALHFF---------ADMEARGLQ-------PDAFTYNVVL 667

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVF------------------------------- 360
           + L + G+ + A ++  ++ + G +   F                               
Sbjct: 668 SALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQD 727

Query: 361 ----LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
                Y  L++GLC S + +E+  +L EM + G      T  ++   L +RQ
Sbjct: 728 SASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 170/688 (24%), Positives = 299/688 (43%), Gaps = 104/688 (15%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N +L +LC    +   E  L++M++     +  T   +L  Y   G+   AL + +++  
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +G   D + ++I++    K     +A  L++RM + N+  +E ++  LIHGF  + +++ 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ +F++M +       A Y  +I G C+N + + A ++  EM+ +G+ P     +K I 
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-------------------------- 282
            C       +L   I  D DV T + L N + ++                          
Sbjct: 413 KC-------MLADGI--DPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 463

Query: 283 --------------------------LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                                     LV+N  I  A  LL +  +   IA+       + 
Sbjct: 464 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA--LLCSFYREGMIAEAEQFKQYMS 521

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           +  +S + +SF+ II++  + G +  A S++  M + G   ++  Y +L+ GLC    L 
Sbjct: 522 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 581

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ E +  + E        TLN++   +C+   +  AL+L  KM  +   P     T+L+
Sbjct: 582 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 641

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGC 495
              CK GK + A   L  M+++G +PD + Y+  + GL++  +V  A  +F++I C  G 
Sbjct: 642 DGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGL 701

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             D +AYN +++G  K  ++ E E L   M    + PS A+YN+L++G+ K G + +  L
Sbjct: 702 YADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT-L 760

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM--EEKGCAPNRITFMALIT 613
            L R + KE   PD +TY  LI GLC  G  + A+    +M  EE G  P    ++ALI 
Sbjct: 761 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALIN 820

Query: 614 -----------------------------------GLCKCDRPRAALVHFRMMKEKGMKP 638
                                              GLCKC +   A++ F  +   GM P
Sbjct: 821 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 880

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  F  L+     E     AF + + M
Sbjct: 881 TIATFTTLMHGLCKEFKIDDAFHLKQLM 908



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 247/514 (48%), Gaps = 23/514 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +EA   F  + R GL V N+  +N LL +  +   +   E   + M      +D  +
Sbjct: 473 GHAKEALKYFVDIYRSGL-VANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVAS 531

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++  YC  G   +A SV++ ++ HGW  D   +  LL    + G + +A E +  + 
Sbjct: 532 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 591

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +    ++EKT   L+ G  K   +D+AL L +KM       D   Y +++ G CK  ++ 
Sbjct: 592 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIV 651

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
            AL L   M   G+ PD    + L+    +EG++   + + +EI     +    +  NS+
Sbjct: 652 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 711

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M   +  G I++   L++ M + E                V P+++S++I+++  +K G+
Sbjct: 712 MNGYLKGGQINEIERLMRNMHENE----------------VYPSSASYNILMHGYIKKGQ 755

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM--EESGFKPTHFTL 397
           L   L L+R+M + G   +   Y  LI GLC    +E + + L +M  EESG +P H   
Sbjct: 756 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHY 815

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++    CR  D+ GA  L   M+  G  P     + +++ LCK GK  EA    + +++
Sbjct: 816 IALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMR 875

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +P I  ++  + GL    ++D A  L + + + G   DVV YN++I+GLC  + + +
Sbjct: 876 AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICD 935

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A DL+ EM +KGL+P++ TY  L      +G + 
Sbjct: 936 ALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 969



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 262/598 (43%), Gaps = 64/598 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +Y+ L+  +CK   +   +  L  MQ  G   +    T L+  +C +G   +AL  
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481

Query: 124 FNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F +I   G V   V  + LL +F + G + +A +  + M    I  +  +F  +I  + +
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 541

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  V +A  ++D M + G+  D   Y  ++ GLC+   L  A +               +
Sbjct: 542 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEF--------------M 587

Query: 243 LSKLITSCS-DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           +  L  +C+ DE  L                    N+++  +  +G++D+A +L + M+ 
Sbjct: 588 VYLLEKACAIDEKTL--------------------NTLLVGICKHGTLDEALDLCEKMVT 627

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             + P+T ++ I+++   K GK+  AL L + M + G + +   
Sbjct: 628 R----------------NILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIA 671

Query: 362 YNNLIDGLCNSNRLEESYELLREME-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           Y  L++GL N  +++ +  + +E+  + G        NSM     +   +     L+R M
Sbjct: 672 YTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM 731

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                 P      +L+    K G+         DMV+EG  PD V Y   I GL +   +
Sbjct: 732 HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLI 791

Query: 481 DLALELFRDIC--AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           ++A++    +     G  P    Y  +I+  C+   +  A +L  +M   G++PS    +
Sbjct: 792 EIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES 851

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            ++ G CK G +++A++  S ++ +    P + T+TTL+ GLC   + DDA  L   ME 
Sbjct: 852 SIVRGLCKCGKVEEAIIVFSSIM-RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 910

Query: 599 KGCAPNRITFMALITGLCK----CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            G   + +T+  LITGLC     CD    AL  +  MK KG+ P++  ++ L  A  +
Sbjct: 911 CGLKVDVVTYNVLITGLCNKKCICD----ALDLYEEMKSKGLLPNITTYITLTGAMYA 964



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 256/593 (43%), Gaps = 66/593 (11%)

Query: 118 DKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-- 175
            +A+SV   +   G+    +FS LL               I R D  N+      F V  
Sbjct: 125 SQAMSVLRHLALTGFSCSAIFSSLL-------------RTISRCDPTNL------FSVDL 165

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L++ +VK+ +V  A      M + GF +     + I+  L    + E       E     
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 236 ITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
              D    + ++ S   +G+L+    +++++   R  N +T   N+I+   V  G    A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTY--NTILNWYVKKGRCKSA 283

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFK-------------------GTVSPNTSSFDIIINT 333
             +L  M K    AD+    +MI K                     ++P+  S++ +I+ 
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
              +GK++LA+ +F +M +     +V  Y  LIDG C + R +E+  +L EM+ +G +P 
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 394 H--------------------FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
                                 T +++   +C+   +     ++ +M+  G  P     T
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 463

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            L+   CK G A EA ++  D+ + G + + V ++A +        +  A +  + +   
Sbjct: 464 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 523

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
               DV ++N II   C+   V EA  +++ M+  G  P + TY  L+ G C+ G++ QA
Sbjct: 524 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 583

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              +  +LEK + + D  T  TL+ G+C  G  D+A+ L  +M  +   P+  T+  L+ 
Sbjct: 584 KEFMVYLLEK-ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 642

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G CK  +   AL+  +MM EKG+ PD   +  L++  ++E     A  + +E+
Sbjct: 643 GFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 695



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 2/227 (0%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEA 75
           L +D+VK            LI  L   GL+E A    ++ V  E    P +  Y  L+ A
Sbjct: 762 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINA 821

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
            C+   +D      ++M+  G    +   + +++  C  G+ ++A+ VF+ I+  G V  
Sbjct: 822 KCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 881

Query: 136 -HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
              F+ L+    K  ++D A  L + M+ C ++++  T+ VLI G   K  +  AL L++
Sbjct: 882 IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 941

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +M   G   +   Y  + G +     ++   +L  +++  GI P ++
Sbjct: 942 EMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYK 988


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 171/646 (26%), Positives = 280/646 (43%), Gaps = 55/646 (8%)

Query: 38  RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW 97
           R +G  G +E         +  G      YS+  LL   C++  VD        M   G 
Sbjct: 114 RMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSF--LLHCYCRNGMVDRAVDTFAWMSKMGV 171

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE- 156
               Y  + +L +  +S + D  L  + E+     V E VF+    +F K GEV+K    
Sbjct: 172 SISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFN----SFLKRGEVEKGLNF 227

Query: 157 --------LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                   L+ ++ DCN          ++ G    +++  A   FD M +SG + +   +
Sbjct: 228 HRALVERGLVPKIVDCN---------KILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIW 264
             +I   CK  +L+ A  LY+ M   GI PD  I S LI      G+L    +L    + 
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
             R V    ++ +SIM   V  G + +A  +   M+K                  +SPN 
Sbjct: 339 --RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE----------------GISPNV 380

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I+IN L ++G++  A  +F ++ + G   +V  Y++LIDG C S  L + + L   
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC---- 440
           M   G  P     + +   L R+    G ++   +   Q  +  +  N  L   L     
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQ----GMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           +  +  +  +    M     +PD+V Y+  + GL +  R+D AL LF  +   G  PD +
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I G CK +  A    +F  M + G+ P +  YN+LIN + + G ++  +L L R 
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN-VLELLRE 615

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + K    PD++TY T+I G C       AI L+  ++     PN ITF  LI   CK  R
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A++ F  M E+G +P++  +  LI  +    N   AFE+ ++M
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/618 (24%), Positives = 285/618 (46%), Gaps = 33/618 (5%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G   F+       G VE+       +   GL VP     N +L+ LC    + +      
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGL-VPKIVDCNKILKGLCMGNQIGVASDFFD 264

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
            M   G   +  T + L+ VYC   + D+A S++N +I+ G V D  ++SIL+    + G
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++++   L        ++++   F  ++  +V+   + KA++++ +M K G + +   Y 
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYS 384

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE------GELTLLVKE 262
           ++I GLC+N ++  A  ++ ++   G+ P     S LI   C  E      G   +++++
Sbjct: 385 ILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVS 321
                DV   ++L N + R     G +D+A     QA+ +G                 ++
Sbjct: 445 -GHVPDVVVCSMLINGLSR----QGMMDEALRFFFQAVKRG-----------------LT 482

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N   F+ +I+   +  +    L ++  M     + +V  Y  L+ GL    RL+E+  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             ++ + GF P H    ++    C+++D    L + + M+  G  P +    +LI    +
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G        L ++++ G  PDIV Y+  I G   +K    A++LF  +      P+ + 
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           + I+I   CK  R+ +A  +F+ M+ +G  P++ TY+ LI+G+ K+ N + A     +ML
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             +  SP++++Y+ LIDGLC  G  ++A + +     +   P+ I +  LI G CK  R 
Sbjct: 723 -GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781

Query: 622 RAALVHFRMMKEKGMKPD 639
             A++ +  M   G+ PD
Sbjct: 782 AEAMMLYDHMLVNGIMPD 799



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 169/640 (26%), Positives = 290/640 (45%), Gaps = 33/640 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FL+ C    G+V+ A   F  + + G+ + ++Y+ + +L+ L  S  +D++    +EM  
Sbjct: 145 FLLHCYCRNGMVDRAVDTFAWMSKMGVSI-SHYAASEMLDLLIDSDRIDVILENYEEMCK 203

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G G  ++     L+     G+ +K L+    +++ G V + V  + +L       ++  
Sbjct: 204 -GLGVYEFVFNSFLK----RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +  + M       N  TF  LI+ + K+ R+D+A  L++ M + G   D  +Y ++I 
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL-------TLLVKEIWED 266
           GL +  +LE    L+S     G+  D  I S ++ +    G+L       T ++KE    
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE-GIS 377

Query: 267 RDVNTMTLLCNSI---MRILVSNGSIDQAY------------NLLQAMIKGEPIAD-VGV 310
            +V T ++L N +    R+L + G   Q              +L+    K E + D  G+
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
             +M+ KG V P+     ++IN L + G +D AL  F +  + G   N +L+N LIDG  
Sbjct: 438 YGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCF 496

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R  +  ++   M      P   T   + + L  +  +  AL L  ++  +G  P   
Sbjct: 497 RLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI   CK        +    M   G  PDI  Y+  I        V+  LEL R+I
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +G  PD+V YN +I G C  +  ++A  LF  +      P+  T+ +LI+ +CK G +
Sbjct: 617 IKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRM 676

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D AML  S MLE+    P+++TY+ LIDG       + A  L+ +M     +PN +++  
Sbjct: 677 DDAMLIFSSMLER-GPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LI GLCK      A + F+    + + PD+  +  LI  +
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 261/593 (44%), Gaps = 85/593 (14%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A  LF+++ R     P  + +N +L +L KS     V    ++M+  G   +     
Sbjct: 66  VDDAVSLFNRLLRRN-TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            L+  +C  G    A SVF +I+  G+V + +                            
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTI---------------------------- 156

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
                 TF  LI G   K ++ +A    DK+   GF  D   Y  +I GLCK  +   AL
Sbjct: 157 ------TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L   + G+ + P+                                  ++ N+I+  +  
Sbjct: 211 DLLQRVDGNLVQPN---------------------------------VVMYNTIIDSMCK 237

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +++A++L   MI                KG +SP+  ++  +I+     GKL+ A+ 
Sbjct: 238 VKLVNEAFDLFSEMIS---------------KG-ISPDVVTYSALISGFCILGKLNDAID 281

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF +M       +V+ +N L++  C   +++E   +   M + G KP   T NS+    C
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             ++V  A ++   M   G  P ++  +++I   CK  K  EA     +M ++  +PD+V
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS+ I GL    R+  AL+L   +   G  P +  YN I+  LCK  +V +A  L  ++
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             KG+ P++ TY++LI G C+SG ++ A      +L K   + +V TYT +I G C+ G 
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK-GHNLNVDTYTIMIQGFCVEGL 520

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            ++A+ L ++ME+ GC P+  T+  +I  L K D    A    R M  +G++P
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 229/478 (47%), Gaps = 23/478 (4%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F   + VD A+ LF+++ +      A  ++ I+G L K+K     L L  +M+  GI P+
Sbjct: 60  FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119

Query: 240 FEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               + LI      G      ++  K +      +T+T    ++++ L   G I QA+  
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF--TTLIKGLCLKGQIQQAF-- 175

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               +  + +  +G     I  GT          +I+ L K G+   AL L + +     
Sbjct: 176 ----LFHDKVVALGFHFDQISYGT----------LIHGLCKVGETRAALDLLQRVDGNLV 221

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV +YN +ID +C    + E+++L  EM   G  P   T +++    C    +  A++
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAID 281

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  KM ++  +P V    +L+   CK GK  E       M+++G  P+ V Y++ + G  
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            +K V+ A  +F  +   G  PD+ +Y+I+I+G CK ++  EA +LF EM  K +IP V 
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY+ LI+G  KSG I  A+  + +M ++    P + TY +++D LC   + D AI L  +
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDR-GVPPTIRTYNSILDALCKIHQVDKAIALLTK 460

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +++KG  PN  T+  LI GLC+  +   A   F  +  KG   ++  +  +I  F  E
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVE 518



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 169/344 (49%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S+     T   +  +D A+SLF  + +       F +N ++  L  S        L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           ++ME  G KP     N +  C C+   +  A ++  K+   G+ P     T LIK LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  +AF F   +V  GF  D + Y   I GL  +     AL+L + +  +   P+VV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N II  +CK + V EA DLF+EMI+KG+ P V TY+ LI+G+C  G ++ A+   ++M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            E+  PDV T+  L++  C  G+  +   +++ M ++G  PN +T+ +L+ G C      
Sbjct: 289 -ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A   F  M + G+ PD+  +  +I+ F        A  + KEM
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 184/399 (46%), Gaps = 20/399 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  VG    A  L  +V    L  PN   YN +++++CK   V+       E
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGN-LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGE 150
           M   G   D  T + L+  +C  G+ + A+ +FN+ I+++   D + F+IL+ AF K G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + +   + + M    I+ N  T+  L+ G+     V+KA  +F+ M + G   D   Y +
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRD 268
           +I G CK K+ + A+ L+ EM    I PD    S LI   S  G ++  ++ +    DR 
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V       NSI+  L     +D+A  LL  +       D G++          PN  ++ 
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKL------KDKGIQ----------PNMYTYS 474

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I  L + GKL+ A  +F  +   G   NV  Y  +I G C      E+  LL +ME++
Sbjct: 475 ILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDN 534

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G  P   T   +   L ++ +   A  L+R+M  +G  P
Sbjct: 535 GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 214/478 (44%), Gaps = 54/478 (11%)

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           V+    ++ALQLF +       + +  Y+V+I G C    L+ A  L  EM   G+    
Sbjct: 2   VRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGM---- 56

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                    C+D                  T +++   + R     G + QA        
Sbjct: 57  --------QCNDR-----------------TTSIILQGLCRC----GRVAQALEHF---- 83

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNV 359
                 D  +E+         P+  S+  +IN L K G++D A  LFR+M   G C  N 
Sbjct: 84  ------DASLEL-----AHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNA 132

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F YN L+DGLC  +RL+ +  ++ E  +  F P   T N++   L +   V  AL    +
Sbjct: 133 FTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQ 192

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G+ P +     +I  LC+  +  +A     +M+   F P++V YS  I GL    +
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A +L   + + GC PD+VAY  ++ G   A R+  A  L   M+++G IP V TY +
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+  CK G +D A   + R L     SP+V+TY+ LI G C A R D+   +  EM   
Sbjct: 313 VIDKLCKVGRVDDAHE-IFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM--- 368

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
            C PN +T+  +I GL   DR   A   FR M E G  PD   +  L  A      PP
Sbjct: 369 ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPP 426



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 227/475 (47%), Gaps = 52/475 (10%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + G  ++A +L  R + C +  +  T+ VLI GF   S +D A  L  +M   G   +  
Sbjct: 3   RAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
              +I+ GLC+  ++  AL+ +                        +  L L   +    
Sbjct: 62  TTSIILQGLCRCGRVAQALEHF------------------------DASLELAHAQP--- 94

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            DV + T L N + ++    G +D A++L + M+                 G   PN  +
Sbjct: 95  -DVVSYTTLINGLCKL----GRVDAAFDLFRKMVAA---------------GGCRPNAFT 134

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +++ L K  +LD A ++  E  +     +V  YN L+  L    R++E+     +M 
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 194

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E G+ PT  + N++   LCR + +  AL +  +M  +   P +   +++I  LCK  +  
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 254

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA + L  MV EG  PD+V Y+  + G     R+D AL L R + + GC PDVV Y ++I
Sbjct: 255 EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 314

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
             LCK  RV +A ++F E++     P+V TY+ LI G+C++  +D+      +++ + + 
Sbjct: 315 DKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG----GKVMREMAC 370

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            P+V+TY T+I GL +  R ++A  ++ EM E G  P+  T+  L   L   D+P
Sbjct: 371 RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQP 425



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 4/348 (1%)

Query: 322 PNTS-SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           P +S +++++I        LD A SL REM   G   N    + ++ GLC   R+ ++ E
Sbjct: 22  PASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALE 81

Query: 381 LL-REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKE 438
                +E +  +P   +  ++   LC+   V  A +L RKM   G   P       L+  
Sbjct: 82  HFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDG 141

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK  +   A   +T+  +  F PD+V Y+  +  L  + RVD AL  F  +   G  P 
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V++N II+GLC+A+R+A+A ++FNEMI +   P++ TY+++I+G CKS  +D+A   L 
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           RM+  E   PD++ YT L+ G   AGR D A+ L   M  +GC P+ +T+  +I  LCK 
Sbjct: 262 RMV-SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R   A   FR +      P++  + ALI  +          +V++EM
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 198/431 (45%), Gaps = 23/431 (5%)

Query: 114 SGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           +G  ++AL +F E           +++L+  F    ++D A  L+  MD   ++ N++T 
Sbjct: 4   AGSHNQALQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTT 63

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFAS-DAAMYDVIIGGLCKNKQLEMALQLYSEM- 231
            +++ G  +  RV +AL+ FD   +   A  D   Y  +I GLCK  +++ A  L+ +M 
Sbjct: 64  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 123

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSI 289
              G  P+    + L+     +  L      I E   RD     +  N++M  L   G +
Sbjct: 124 AAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRV 183

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D+A      M +               +G V P   SF+ II  L +  +L  AL +F E
Sbjct: 184 DEALATFTQMTE---------------EGYV-PTLVSFNAIITGLCRARRLADALEVFNE 227

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M       N+  Y+ +IDGLC S++L+E+ +LL  M   G +P       +         
Sbjct: 228 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 287

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL L+R+M  QG  P V   T++I +LCK G+  +A     ++V     P++V YSA
Sbjct: 288 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 347

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            IGG     RVD   ++ R++    C P+VV YN +I GL    R  EA  +F EM   G
Sbjct: 348 LIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404

Query: 530 LIPSVATYNLL 540
            +P   TY  L
Sbjct: 405 FVPDARTYRGL 415



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 26/420 (6%)

Query: 55  QVKREGLC-VP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           Q+ RE  C +P ++ +YN L+   C +  +D     L+EM   G   +  T + +LQ  C
Sbjct: 12  QLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLC 71

Query: 113 NSGQFDKALSVFNEIID--HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLN 169
             G+  +AL  F+  ++  H   D   ++ L+    K G VD A +L  +M      R N
Sbjct: 72  RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 131

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  L+ G  K+ R+D A  +  +  K  FA D   Y+ ++  L +  +++ AL  ++
Sbjct: 132 AFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 191

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
           +M   G  P     + +IT       L   ++   E  DRD +   +  + ++  L  + 
Sbjct: 192 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 251

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D+A  LL  M+                     P+  ++  ++      G+LD AL L 
Sbjct: 252 QLDEAQQLLDRMV----------------SEGCRPDLVAYTPLVLGFSAAGRLDSALGLL 295

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R M   GC+ +V  Y  +ID LC   R+++++E+ RE+  +   P   T +++    CR 
Sbjct: 296 RRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRA 355

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V     ++R+M  + +   V +NT +I  L    +  EA+    +M + GF+PD   Y
Sbjct: 356 SRVDEGGKVMREMACRPN--VVTYNT-MIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 35/377 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV-EMRLKEMQD 94
           L RC    G V +A   FD         P+  SY  L+  LCK   VD   ++  K +  
Sbjct: 70  LCRC----GRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 125

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   + +T   L+   C   + D A +V  E     +  + V ++ L+ A  + G VD+
Sbjct: 126 GGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDE 185

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A     +M +        +F  +I G  +  R+  AL++F++M    F  +   Y V+I 
Sbjct: 186 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 245

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWED--R 267
           GLCK+ QL+ A QL   M   G  PD    + L+   S  G L     LL + + +    
Sbjct: 246 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 305

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           DV T T++ + + ++    G +D A+ + + ++  +                 SPN  ++
Sbjct: 306 DVVTYTVVIDKLCKV----GRVDDAHEIFRELVANK----------------CSPNVVTY 345

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I    +  ++D    + REM    C  NV  YN +I GL   +R EE+Y + REM E
Sbjct: 346 SALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 402

Query: 388 SGFKPTHFTLNSMFRCL 404
            GF P   T   + R L
Sbjct: 403 CGFVPDARTYRGLKRAL 419


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 246/585 (42%), Gaps = 82/585 (14%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P    +N LL +L K      V    K+M       + YTLT L+   C+S +      
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR------ 119

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                       +HV      AFS  G          +M    ++    TF  L++G   
Sbjct: 120 ------------DHVH----FAFSALG----------KMFKLGLQPTHVTFGTLLNGLCS 153

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K+++  A++LFD++ K GFA     Y  II GLCK      ALQL  +M+  G  PD   
Sbjct: 154 KAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVA 213

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + +I S             + +DR  N                          +AM   
Sbjct: 214 YNTVIDS-------------LCKDRRAN--------------------------EAMYFF 234

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + D G+           PN  ++  I++     G+L+ A SLF++M     M N   +
Sbjct: 235 SEMVDQGIP----------PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF 284

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             L+DGLC    + E+  +   M E+G +P  +T +++    C +  +  A  L   M  
Sbjct: 285 TILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG 344

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P V+   +LI   CK  +  EA   L++M      PD V YS  + G     R  +
Sbjct: 345 KGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQV 404

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A +LF+++C++G  PD + Y+I++ GLCK   + EA  L   M    + P +  YN+LI 
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G C  G ++ A    S +  K    P V+TYT +I GL   G  ++A  ++ +M   GC 
Sbjct: 465 GMCNFGKLEAARELFSNLFVK-GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL 523

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           PN  T+   I G  +   P  A+     M  +G   D   F  L+
Sbjct: 524 PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 187/367 (50%), Gaps = 38/367 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGK--LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           + PN  +  I+IN L    +  +  A S   +M ++G       +  L++GLC+  ++ +
Sbjct: 100 IRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIID 159

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +L  E+ + GF P+  T  ++ + LC+      AL L++KM  +G +P V     +I 
Sbjct: 160 AVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID 219

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK  +A EA  F ++MV +G  P++V YS+ + G  ++ +++ A  LF+ +      P
Sbjct: 220 SLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMP 279

Query: 498 DVVAYNIIISGLCK------AQRV-----------------------------AEAEDLF 522
           + V + I++ GLCK      A+RV                              EA+ LF
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + M+ KG  PSV  YN+LING CKS  +++A   LS M +++  +PD +TY+TL+ G C 
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL-TPDTVTYSTLMQGFCQ 398

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AGRP  A  L+ EM   G  P+ IT+  L+ GLCK      A    + M+E  ++P + +
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 643 FVALISA 649
           +  LI  
Sbjct: 459 YNILIQG 465



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 244/559 (43%), Gaps = 53/559 (9%)

Query: 111 YCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           Y N      A++ FN+++         VF+ LL +  K         L ++MD  NIR N
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 170 EKTFCVLIHGFVKKSR--VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
             T  +LI+     +R  V  A     KM K G       +  ++ GLC   ++  A++L
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           + E+   G  P       LIT        T ++K + +                      
Sbjct: 164 FDEIGKMGFAPS------LIT-------YTTIIKGLCK---------------------- 188

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            I    N LQ + K E             KG   P+  +++ +I++L KD + + A+  F
Sbjct: 189 -IGHTTNALQLLKKMEE------------KG-CKPDVVAYNTVIDSLCKDRRANEAMYFF 234

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM   G   NV  Y++++ G CN  +L E+  L ++M      P   T   +   LC+ 
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             ++ A  +   M   G EP     + L+   C   +  EA +    MV +GF P +  Y
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G    +R++ A  L  ++      PD V Y+ ++ G C+A R   A+ LF EM +
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            GL+P   TY++L++G CK G++D+A   L  M E +   P +  Y  LI G+C  G+ +
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI-EPHICIYNILIQGMCNFGKLE 473

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  L++ +  KG  P+ +T+  +I+GL K      A   FR M   G  P+   +   I
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533

Query: 648 SAFLSELNPPLAFEVLKEM 666
             FL   +P  A  +++EM
Sbjct: 534 QGFLRNGDPSNAVRLIEEM 552



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 17/482 (3%)

Query: 64  PNNYSYNCLLEALCKSC--SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           PN Y+   L+  LC S    V      L +M   G      T   LL   C+  +   A+
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F+EI   G+    + ++ ++    K G    A +L+++M++   + +   +  +I   
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R ++A+  F +M   G   +   Y  I+ G C   QL  A  L+ +M G  + P+ 
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNT 281

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + L+     EG        I E R V  M +  N +     +  ++   Y L   M 
Sbjct: 282 VTFTILVDGLCKEGM-------ILEARRVFEM-MTENGVEPDAYTYSALMDGYCLQSQMD 333

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           + + + D+     M+ KG  +P+   ++I+IN   K  +L+ A +L  EM       +  
Sbjct: 334 EAQKLFDI-----MVGKG-FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ L+ G C + R + + +L +EM   G  P   T + +   LC+   +  A  L++ M
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +    EP +    +LI+ +C  GK   A    +++  +G  P +V Y+  I GL+     
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + A E+FR +  +GC P+   YN+ I G  +    + A  L  EM+ +G     +T+ +L
Sbjct: 508 NEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQML 567

Query: 541 IN 542
           ++
Sbjct: 568 LD 569



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 190/395 (48%), Gaps = 26/395 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I+ L  +G    A  L  +++ +G C P+  +YN ++++LCK    +       EM D 
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKG-CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  T + +L  +CN GQ ++A S+F ++I    +   V F+IL+    K G + +A
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M +  +  +  T+  L+ G+  +S++D+A +LFD M   GFA    +Y+++I G
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK+++L  A  L SEM    +TPD    S L+      G   +  K     +++ +  L
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLF---KEMCSYGL 417

Query: 275 LCNSI-----MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           L +SI     +  L  +G +D+A+ LL+AM + +                + P+   ++I
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK----------------IEPHICIYNI 461

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I  +   GKL+ A  LF  +   G   +V  Y  +I GL       E+ E+ R+M  +G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
             P   T N   +   R  D   A+ L+ +M  +G
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRG 556


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 231/503 (45%), Gaps = 20/503 (3%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PL  L +++V     + P  L  LI   G      +A  LF+Q +    C P  +++  L
Sbjct: 13  PLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA-CSPTVHAFTKL 71

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHG 131
           ++ L  S   +  E+  K++   G   D++    L++ +  SGQ D A+ +F E+ I   
Sbjct: 72  IDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS 131

Query: 132 WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
             DE+ +  L+ A  K G V +A    + M +  +  N  T+ +L+  F K  ++D AL 
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           LF +M + GF      Y++++  LC   ++  A +L+ +M G G +PD    S L+    
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251

Query: 252 DEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
             G +    K   E  DR V    +  NS++  L   G++D+ + L++ M +        
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR-------- 303

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                  KG   P+  SF+ I++ L K  K D A  +F  M + GC  ++  YN LID  
Sbjct: 304 -------KG-FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
                  ++ ++L EM E+GF P   T NS+   L     V  A  ++ +M   G  P V
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                L+  L K G+   A R    M  +G  PD + Y+  I GL    R+D AL LF+D
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475

Query: 490 ICAHGCCPDVVAYNIIISGLCKA 512
           + A GC  D   Y I+I    +A
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRA 498



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 249/545 (45%), Gaps = 53/545 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +L V  + G  D   ++  E++  G  +  +    L+ A+ +  +   A +L  + +   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
                  F  LI   V     ++A  ++ K+ + G   D   Y+V+I    ++ QL+ A+
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +++ EMK  G  PD                               T   L N++ +    
Sbjct: 121 EMFREMKIKGSEPD-----------------------------EYTYGFLVNALGKA--- 148

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G + +A +   AM++               +G ++PN  +++++++   K G+LD+AL 
Sbjct: 149 -GRVQEARSFFDAMLE---------------RG-LTPNIPTYNLLMDAFRKVGQLDMALG 191

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EM + G   +V  YN L+D LC++ R+  + +L  +M   G  P  +T +++   L 
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251

Query: 406 RRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           +   V  A  + R+M  +G     V +N+LL   L K G     ++ + +M ++GF PD 
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLAT-LAKAGNMDRVWKLMKEMSRKGFHPDA 310

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             ++  +  L    + D A E+F  +   GC PD+++YNI+I    +    A+A  +  E
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+  G IP   TYN LI+     G +D+A   L  M E     PDV+TY  L+D L   G
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM-ETAGCRPDVVTYNRLMDMLGKRG 429

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
               A  L+ +M++KG  P+ +++   I GL   DR   ALV F+ MK  G   D  ++ 
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYR 489

Query: 645 ALISA 649
            LI A
Sbjct: 490 ILIRA 494



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 183/386 (47%), Gaps = 19/386 (4%)

Query: 282 ILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +L S G +D    LL+ M+ +G P+                PNT     +I    +  K 
Sbjct: 4   VLASWGILDPLETLLKEMVAEGRPL---------------RPNT--LVKLITAYGRGNKS 46

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  LF +     C   V  +  LID L NS   E +  + +++ + G +   F  N +
Sbjct: 47  GDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVL 106

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            R   R   +  A+ + R+M+++G EP       L+  L K G+  EA  F   M++ G 
Sbjct: 107 IRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGL 166

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P+I  Y+  +     + ++D+AL LF ++   G  P VV YNI++  LC A RV  A  
Sbjct: 167 TPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARK 226

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF++M   G  P   TY+ L+NG  KSG +++A      M+++   + D++ Y +L+  L
Sbjct: 227 LFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR-GVAVDLVNYNSLLATL 285

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             AG  D    L  EM  KG  P+  +F  ++  L K ++P AA   F  M E G KPD+
Sbjct: 286 AKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDL 345

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  LI ++    +   A ++L+EM
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEM 371



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 199/440 (45%), Gaps = 23/440 (5%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVKEIWEDRDVNTMTLLCNSIMR 281
           A  L+++ +    +P     +KLI    + GE     LV +    +         N ++R
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 282 ILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
               +G +D A  + + M IKG                   P+  ++  ++N L K G++
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGS-----------------EPDEYTYGFLVNALGKAGRV 151

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A S F  M + G   N+  YN L+D      +L+ +  L  EM+  GF+P+  T N +
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC    V  A  L  KM   G  P     + L+  L K G+  EA +   +MV  G 
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             D+V Y++ +  L     +D   +L +++   G  PD  ++N I+  L KA +   A +
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +F  M+  G  P + +YN+LI+ + + G+  QA   L  M+E     P+  TY +LI  L
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA-GFIPETKTYNSLIHWL 390

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G+ D+A  +  EME  GC P+ +T+  L+  L K    + A   F+ MK+KG++PD 
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 641 FVFVALIS--AFLSELNPPL 658
             +   I   AF   L+  L
Sbjct: 451 LSYAVRIDGLAFDDRLDEAL 470



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 30/390 (7%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           GFL+  LG  G V+EA   FD +   GL  PN  +YN L++A  K   +D+      EM+
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAMLERGLT-PNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVD 152
             G+     T   LL   C++G+   A  +F+++   G   D + +S L+    K G V+
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A ++   M D  + ++   +  L+    K   +D+  +L  +M++ GF  DA  ++ I+
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             L K  + + A ++++ M  SG  PD   + IL        D  +   +++E+ E   +
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAM--------------------IKGEPIADVG 309
              T   NS++  L ++G +D+A+ +L+ M                     +GE      
Sbjct: 378 PE-TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           +   M  KG V P+T S+ + I+ L  D +LD AL LF++M  +GC  +  +Y  LI   
Sbjct: 437 LFQQMKDKG-VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAA 495

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNS 399
             +   E   +L     ES F P    L S
Sbjct: 496 HRAGDTELEAQL---KHESQFMPVESRLTS 522



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 4/210 (1%)

Query: 24  SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           SR    P A  F  ++  LG     + A  +F ++   G C P+  SYN L+++  +   
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG-CKPDLISYNILIDSYARFGD 360

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSI 140
                  L+EM + G+  +  T   L+      GQ D+A +V  E+   G   D   ++ 
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+    K GE  +A  L ++M D  +  +  ++ V I G     R+D+AL LF  M   G
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
              D AMY ++I    +    E+  QL  E
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTELEAQLKHE 510


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 272/610 (44%), Gaps = 77/610 (12%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S  A   L+    S G   +A   F ++  E    P  + YN +L+AL  S  + L    
Sbjct: 136 SSSAFAALVAAHSSAGRHADAVQAFSRMD-EFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
              M   G   ++ T   L+   C  G    AL +F+E++D G + +  ++++LL +   
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++D+A +L+  M D     +E T+   + G  K  RV++A Q    +   GFA     
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWE 265
           Y  +I GL + ++ +     Y  M    I+PD  + + +I  C++ G +   L   ++ +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +     T   N+++++L  +G +++A+ L   M++   + D   + +MI          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICG-------- 426

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
                   L K G +D A+ +F EM + GC   V  YN LIDG     RLEE+  L  +M
Sbjct: 427 --------LCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G  P      S+F  L    + V     +RK               L+ ++C+ G+ 
Sbjct: 479 -EMGNNP------SLFLRLTLGANQVCDSESLRK---------------LVHDMCQSGQV 516

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           ++A++ L  ++  G +PD+V Y+  I GL   + +D A+ LF+++   G  PD + Y  +
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEK- 563
           I GL +A R  +A  LF  ++  G  PS++ YN ++   C+   + QA+ L L  + +K 
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKY 636

Query: 564 ----------------ESGSPD-----------------VITYTTLIDGLCIAGRPDDAI 590
                           E GS D                    YT  + GLC   R DDA+
Sbjct: 637 NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDAL 696

Query: 591 MLWNEMEEKG 600
            +++ ++E G
Sbjct: 697 RIFHTLQEFG 706



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 237/497 (47%), Gaps = 34/497 (6%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+ A S  G    A +   RMD+   R     +  ++   V    +  AL L+++M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A + A Y+V++ GLCK      AL+++ EM   GI P+ +I + L++S  + G++
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 257 TLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              V+ +   +D   +   +  N+ +  L   G +++A+                  ++M
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ----------------RLVM 302

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +  G  +     +  +I+ L +  + D     ++ M +     +V LY  +I G   + R
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E++   L  M++ GF P  F  N++ + LC   D+  A  L  +M            T+
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD----- 489
           +I  LCK G   EA +   +M + G  P ++ Y+A I G     R++ A  LF       
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482

Query: 490 ---------ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
                    + A+  C D  +   ++  +C++ +V +A  L   +I  G++P V TYN L
Sbjct: 483 NPSLFLRLTLGANQVC-DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ING CK+ N+D A+  L + L+ +  SPD ITY TLIDGL  A R +DA+ML+  + + G
Sbjct: 542 INGLCKARNLDGAVR-LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600

Query: 601 CAPNRITFMALITGLCK 617
            +P+   + +++  LC+
Sbjct: 601 SSPSLSIYNSMMRSLCR 617



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 219/506 (43%), Gaps = 100/506 (19%)

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSN 286
           ++ + +G+       + L+ + S  G     V+     ++        + N+I++ LV +
Sbjct: 126 ADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDS 185

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I  A  L   M+                    +PN ++++++++ L K G    AL +
Sbjct: 186 GVILLALALYNRMVAA----------------GCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM   G M NV +Y  L+  LCN+ +++E+ +LL  M++ G  P   T N+    LC+
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 407 -------------RQDVVGALNL----------------------VRKMRVQGHEPWVKH 431
                         QD   AL L                       + M  +   P V  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T++I+   + G+  +A  FL  M ++GF+PD  CY+  +  L D   ++ A  L  ++ 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +    D     I+I GLCK   V EA  +F+EM   G  P+V TYN LI+G+ + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 552 QAML------------------------CLSRMLEK------ESGS-------------- 567
           +A +                        C S  L K      +SG               
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 568 ---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PDV+TY TLI+GLC A   D A+ L+ E++ KG +P+ IT+  LI GL +  R   A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
           ++ F+ + + G  P + ++ +++ + 
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 190/434 (43%), Gaps = 51/434 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR     G +E+A    D +K++G  VP+ + YN +L+ LC    ++       EM   
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGF-VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
               D  T T ++   C  G  D+A+ +F+E+ +HG  D  V  ++ L+  F + G +++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEE 470

Query: 154 ACELIERMDDCN-----IRL--------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           A  L  +M+  N     +RL        + ++   L+H   +  +V KA +L   +  SG
Sbjct: 471 ARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG 530

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELT 257
              D   Y+ +I GLCK + L+ A++L+ E++  GI+PD      LI        E +  
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL--------LQAMIKGEPIA--- 306
           +L + I +     ++++  NS+MR L     + QA NL            ++ E +A   
Sbjct: 591 MLFQNILQSGSSPSLSIY-NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 307 --------DVGVEMLMIFK---GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                   D GV  L+      G +S N   + I +  L +  + D AL +F  + + G 
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSN--PYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQDVVG 412
                    LI+ LC    L  + +++          +    N + R LC   RRQD   
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQD--- 764

Query: 413 ALNLVRKMRVQGHE 426
           A  L  +M + G++
Sbjct: 765 AQALAWRMHLVGYD 778


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 251/513 (48%), Gaps = 22/513 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +  A +L +++   GL VPN  +Y+ L++  CK+ +++       EM+  G     Y+
Sbjct: 277 GNLRSALVLVNEISESGL-VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYS 335

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L  +L+ Y     +  A ++FN+ ++ G  +   F+ LL    K G++++AC L + +  
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA 395

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  N  ++  +I G  +K  ++ A +++ +M  +GF  +A  + +++ G  K   +E 
Sbjct: 396 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 455

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---NSIM 280
           A  ++  MK + I P    L  +I      G  +   ++++           C   N+I+
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGR-SFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              +  G+I+ A N+ + M       +VG+          +P+T ++  +I+   K   +
Sbjct: 515 DGFIKEGNINLASNVYREM------CEVGI----------TPSTVTYTSLIDGFCKGNNI 558

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           DLAL L  +M + G   ++  Y  LIDG C    ++ ++ELL E+  +G  P  F  NSM
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                   +V  A++L +KM  +G    +K  T LI  L K G+ + A    T+M+ +G 
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LPD   ++  I GL +  + + A ++  D+      P V+ YN +I+G  K   + EA  
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKS-GNIDQ 552
           L +EM+ +GL+P   TY++L+NG  K  GN  +
Sbjct: 739 LHDEMLDRGLVPDNITYDILVNGKFKGDGNFSR 771



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 165/661 (24%), Positives = 283/661 (42%), Gaps = 84/661 (12%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-----SCSVDLVE 86
           A+  L+  L +      A  LFDQ          +  ++CL++ L +     +  +D+ E
Sbjct: 117 AVCILLLILTNSAETHRAQYLFDQ-----FASGKSVRFSCLMDRLVECTKLYNFPLDIQE 171

Query: 87  MRLKEMQDY-------GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVF 138
             + E + +       G   D+   +  + + C       ALS+  E+   GW+  E  F
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + ++ A  K G V +A  L + M +C   +N      L+ G+  +  +  AL L +++++
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGE 255
           SG   +   Y V+I G CKN  +E A + YSEMK  GI      L+ ++     C     
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLM 314
              +  +  E    N  T   N+++  L   G +++A NL   +I KG     V    ++
Sbjct: 352 AFTMFNDALESGLANVFTF--NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409

Query: 315 I------------------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM------ 350
           +                       +PN  +F I+++   K G ++ A S+F  M      
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 469

Query: 351 ---TQIGC----------------MQNVFL----------YNNLIDGLCNSNRLEESYEL 381
              T +G                 + N F+          YN +IDG      +  +  +
Sbjct: 470 PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNV 529

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            REM E G  P+  T  S+    C+  ++  AL L+  M+ +G +  +K    LI   CK
Sbjct: 530 YREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 589

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                 A   L ++   G  P+   Y++ I G  ++  V+ A++L++ +   G   D+  
Sbjct: 590 RRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKT 649

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  +I GL K+ R+  A D+  EM++KG++P    + +LING C  G  + A     ++L
Sbjct: 650 YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA----RKIL 705

Query: 562 EKESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           E  +G    P V+ Y TLI G    G   +A  L +EM ++G  P+ IT+  L+ G  K 
Sbjct: 706 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 765

Query: 619 D 619
           D
Sbjct: 766 D 766



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 232/500 (46%), Gaps = 27/500 (5%)

Query: 174 CVLIHGF---VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           C  ++ F   +++  + +A Q F +    G   D   Y + +  LC       AL L  E
Sbjct: 159 CTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 218

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M+ +G  P     + +IT+C  EG +   ++   +D  VN     C   M + V+  S+ 
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALR--LKDDMVN-----CGKSMNLAVAT-SLM 270

Query: 291 QAY----NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           + Y    NL  A++    I++ G+           PN  ++ ++I+   K+G ++ A   
Sbjct: 271 KGYCMQGNLRSALVLVNEISESGL----------VPNKVTYSVLIDGCCKNGNIEKAFEF 320

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           + EM   G   +V+  N++++G       + ++ +  +  ESG     FT N++   LC+
Sbjct: 321 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV-FTFNTLLSWLCK 379

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A NL  ++  +G  P V     +I   C+      A +   +M+  GF P+ V 
Sbjct: 380 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 439

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           ++  + G      ++ A  +F  +      P      III GLCKA R  E  DLFN+ +
Sbjct: 440 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 499

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           ++G +P+   YN +I+G+ K GNI+ A      M E    +P  +TYT+LIDG C     
Sbjct: 500 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV-GITPSTVTYTSLIDGFCKGNNI 558

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D A+ L N+M+ KG   +   +  LI G CK    ++A      ++  G+ P+ F++ ++
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I+ F +  N   A ++ K+M
Sbjct: 619 ITGFKNMNNVEEAIDLYKKM 638



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 229/536 (42%), Gaps = 55/536 (10%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           +D+  +SI +           A  L+  M        E TF  +I   VK+  V +AL+L
Sbjct: 191 LDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRL 250

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
            D M   G + + A+   ++ G C    L  AL L +E+  SG+ P+    S LI  C  
Sbjct: 251 KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCK 310

Query: 253 EGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            G +    +   E   + + +     NSI+   +   S   A+ +    ++       G+
Sbjct: 311 NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES------GL 364

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                       N  +F+ +++ L K+GK++ A +L+ E+   G   NV  YNN+I G C
Sbjct: 365 -----------ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             + +  + ++ +EM ++GF P   T   +     ++ D+  A ++  +M+     P   
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              ++IK LCK G++ E                                     +LF   
Sbjct: 474 TLGIIIKGLCKAGRSFEG-----------------------------------RDLFNKF 498

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            + G  P  + YN II G  K   +  A +++ EM   G+ PS  TY  LI+G+CK  NI
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D A+  L+ M +++    D+  Y TLIDG C       A  L NE+   G +PNR  + +
Sbjct: 559 DLALKLLNDM-KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNS 617

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +ITG    +    A+  ++ M  +G+  D+  + +LI   L       A ++  EM
Sbjct: 618 MITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 673


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 175/636 (27%), Positives = 294/636 (46%), Gaps = 33/636 (5%)

Query: 6   SRARRIAPLRV-LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           S  R  A L V L   +V+S   M    +G LIRC  +VG ++ A   F    + G  V 
Sbjct: 66  SSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRV- 124

Query: 65  NNYSYNCLLEALCKSCSVD-LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
            N + N L++ LC     D  ++M  + M + G+  D ++   L++  C   +  +AL +
Sbjct: 125 QNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 184

Query: 124 FNEIIDHGWVD--EHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
              +   G  +   +V  ++ ++  F K GEVDKA  L   M    +  +  T+  LI G
Sbjct: 185 LIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG 244

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K   +DKA+ +   M   G   D   Y+++I G C   QLE A++L  +M GSG+ PD
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV----SNGSIDQAYNL 295
               S LI      G      + ++ D  V       ++I  IL+    + G++    +L
Sbjct: 305 VVTYSLLIQYYCKIGRCAE-ARSVF-DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362

Query: 296 LQAMIK-GEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLK 336
           L  MI+ G P       +L+                  + +  + P+  S+  +I+ L K
Sbjct: 363 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 422

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+++ A+  F +M   G   N+  + +LI GLC+    ++  EL  EM   G  P    
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           +N++   LC+   VV A +    +   G +P V     LI   C  GK  E+ + L  MV
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV 542

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD   Y++ + G     RV+ AL L+R++         +  NI++ GL +A R+ 
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIV 602

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +L+ +M+ +G    + TYN ++ G C++  +D+A+     +  KE    DV T++ +
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF-ELDVRTFSIV 661

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           I+ L   GR D+A  L++ M  +G  P+ IT+  +I
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 237/504 (47%), Gaps = 19/504 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  +YN ++   C    ++     LK+M   G   D  T + L+Q YC  G+  +A S
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           VF+ ++  G   +  ++ ILL  ++  G +    +L++ M    I    + F +LI  + 
Sbjct: 327 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   VDKA+  F +M ++G   D   Y  +I  LCK  ++E A+  +++M   G++P+  
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI      GE   + +  +E  +R ++   +  N+IM  L   G + +A +    +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I       +GV+          P+  S++ +I+     GK+D ++     M  IG   + 
Sbjct: 507 IH------IGVK----------PDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + YN+L++G   + R+E++  L REM     K    T N M   L +   +V A  L  K
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +  ++    ++  LC++    EA R   D+  + F  D+  +S  I  L+ + R
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A  LF  +   G  PDV+ Y+++I    +   + E+++LF  M   G        N+
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730

Query: 540 LINGWCKSGNIDQAMLCLSRMLEK 563
           ++    + G++ +A   L+++ EK
Sbjct: 731 IVRRLLEKGDVRRAGTYLTKIDEK 754



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 239/548 (43%), Gaps = 68/548 (12%)

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK-------ACELIERMDDCNIRLN 169
           + AL++F+E++        H F+ +L   ++             A  L   M    + + 
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL-Y 228
                +LI  F    R+D A   F    K+G+       + +I GLC   + + A+ + +
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G TPD                                     N++++ L     
Sbjct: 151 RRMPELGYTPD---------------------------------VFSYNALIKGLCVEKK 177

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
             +A  LL  M      AD G           SPN  S++ +I+   K+G++D A  LF 
Sbjct: 178 SQEALELLIHMT-----ADGGY--------NCSPNVVSYNTVIDGFFKEGEVDKAYFLFH 224

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G   +V  YN+LIDGLC +  ++++  +L+ M + G  P   T N M R  C   
Sbjct: 225 EMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLG 284

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A+ L++KM   G +P V   +LLI+  CK G+  EA      MV++G  P+   Y 
Sbjct: 285 QLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 344

Query: 469 ------AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
                 A  G LID++  DL   + RD    G   +  A+NI+I    K   V +A   F
Sbjct: 345 ILLHGYATKGALIDVR--DLLDLMIRD----GIPFEHRAFNILICAYAKHGAVDKAMTAF 398

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM   GL P V +Y+ +I+  CK+G ++ A+   ++M+  E  SP++I++T+LI GLC 
Sbjct: 399 TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS-EGLSPNIISFTSLIHGLCS 457

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G       L  EM  +G  P+ I    ++  LCK  R   A   F M+   G+KPD+  
Sbjct: 458 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517

Query: 643 FVALISAF 650
           +  LI  +
Sbjct: 518 YNTLIDGY 525



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 15/349 (4%)

Query: 328 DIIINTLLK---DG-KLDLALSL-FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           ++ +N L+K   DG + D A+ + FR M ++G   +VF YN LI GLC   + +E+ ELL
Sbjct: 126 NVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL 185

Query: 383 REMEESGF---KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             M   G     P   + N++     +  +V  A  L  +M  QG  P V     LI  L
Sbjct: 186 IHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGL 245

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     +A   L  M  +G +PD   Y+  I G   + +++ A+ L + +   G  PDV
Sbjct: 246 CKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDV 305

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+++I   CK  R AEA  +F+ M+ KG  P+   Y++L++G+   G +      L  
Sbjct: 306 VTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL 365

Query: 560 MLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           M+    G P +   +  LI      G  D A+  + EM + G  P+ +++  +I  LCK 
Sbjct: 366 MIR--DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKT 423

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS----ELNPPLAFEVL 663
            R   A+ HF  M  +G+ P++  F +LI    S    +    LAFE++
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 472



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 38/315 (12%)

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
           LA+SLF  M + G      +   LI   C   RL+ ++       ++G++  + TLN + 
Sbjct: 74  LAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLI 133

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
           + LC       A+++V                               FR + ++   G+ 
Sbjct: 134 KGLCDGNRTDDAMDMV-------------------------------FRRMPEL---GYT 159

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHG---CCPDVVAYNIIISGLCKAQRVAEA 518
           PD+  Y+A I GL   K+   ALEL   + A G   C P+VV+YN +I G  K   V +A
Sbjct: 160 PDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKA 219

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LF+EM+ +GL P V TYN LI+G CK+  +D+A+  L  M +K    PD  TY  +I 
Sbjct: 220 YFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK-GVMPDTRTYNIMIR 278

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  G+ ++A+ L  +M   G  P+ +T+  LI   CK  R   A   F  M  KG KP
Sbjct: 279 GYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKP 338

Query: 639 DMFVFVALISAFLSE 653
           +  ++  L+  + ++
Sbjct: 339 NSTIYHILLHGYATK 353



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 171/364 (46%), Gaps = 32/364 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G VE+A   F+Q+  EGL  PN  S+  L+  LC       VE    EM + 
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLS-PNIISFTSLIHGLCSIGEWKKVEELAFEMINR 474

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D   +  ++   C  G+  +A   F+ +I  G   + V ++ L+  +   G++D++
Sbjct: 475 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES 534

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            + ++RM    +R +  T+  L++G+ K  RV+ AL L+ +M +      A   ++++ G
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGEL---TLLVKEIWED 266
           L +  ++  A +LY +M   G     E  + ++      SC DE       L  KE   +
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF--E 652

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            DV T +++ N+++++    G ID+A +L  AM+   P+                P+  +
Sbjct: 653 LDVRTFSIVINALLKV----GRIDEAKSLFSAMVLRGPV----------------PDVIT 692

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           + ++I + +++G L+ + +LF  M + GC  +  + N ++  L     +  +   L +++
Sbjct: 693 YSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKID 752

Query: 387 ESGF 390
           E  F
Sbjct: 753 EKNF 756



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 181/434 (41%), Gaps = 24/434 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+    +G   EA  +FD + R+G   PN+  Y+ LL       ++  V   L  M  
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIR 368

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G  ++      L+  Y   G  DKA++ F E+  +G   + V +S ++    K G V+ 
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A     +M    +  N  +F  LIHG        K  +L  +M   G   DA   + I+ 
Sbjct: 429 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 488

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM- 272
            LCK  ++  A   +  +   G+ PD    + LI      G++   +K++  DR V+   
Sbjct: 489 NLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL--DRMVSIGL 546

Query: 273 ---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
              +   NS++     NG ++ A  L + M                F+  V     + +I
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREM----------------FRKDVKFCAITSNI 590

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++ L + G++  A  L+ +M   G    +  YN ++ GLC ++ ++E+  +  ++    
Sbjct: 591 MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           F+    T + +   L +   +  A +L   M ++G  P V   +L+IK   + G   E+ 
Sbjct: 651 FELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESD 710

Query: 450 RFLTDMVQEGFLPD 463
                M + G   D
Sbjct: 711 NLFLSMEKNGCAAD 724



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI----DIKRVDLALELFRDICAHGCC 496
           +H  A+ A      MV+ G    +   +A IG LI     + R+DLA   F      G  
Sbjct: 69  RHSAAL-AVSLFNTMVRSG----VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWR 123

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              V  N +I GLC   R  +A D+ F  M   G  P V +YN LI G C      +A+ 
Sbjct: 124 VQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALE 183

Query: 556 CLSRMLEKESG---SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            L  M   + G   SP+V++Y T+IDG    G  D A  L++EM  +G  P+ +T+ +LI
Sbjct: 184 LLIHM-TADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLI 242

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            GLCK      A+   + M +KG+ PD   +  +I  + S      A  +LK+M
Sbjct: 243 DGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 246/527 (46%), Gaps = 52/527 (9%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKW 148
           ++      G+    +  +    C SG + ++L +   ++  G+  + +  + L+  F   
Sbjct: 74  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 133

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             V KA  ++E ++    + +   +  LI+GF K +R+D A ++ D+M    F+ D   Y
Sbjct: 134 RNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 192

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +++IG LC   +L++AL+               +L +L+   SD  + T++         
Sbjct: 193 NIMIGSLCSRGKLDLALK---------------VLDQLL---SDNCQPTVI--------- 225

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
             T T+L  + M      G +D+A  LL  M+                +G + P+  +++
Sbjct: 226 --TYTILIEATML----EGGVDEALKLLDEMLS---------------RG-LKPDMFTYN 263

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II  + K+G +D A  + R +   GC  +V  YN L+  L N  + EE  +L+ +M   
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T + +   LCR   +  A+NL++ M+ +G  P       LI   C+ G+   A
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             FL  M+ +G LPDIV Y+  +  L    + D ALE+F  +   GC P+  +YN + S 
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L  +     A  +  EM++ G+ P   TYN +I+  C+ G +D+A   L  M   E   P
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEF-HP 502

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            V+TY  ++ G C A R +DAI + + M   GC PN  T+  LI G+
Sbjct: 503 SVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 208/474 (43%), Gaps = 51/474 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     V KA+++ + + K G   D   Y+ +I G CK  +++ A ++   M+   
Sbjct: 126 LIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 184

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD                                 T+  N ++  L S G +D A  +
Sbjct: 185 FSPD---------------------------------TVTYNIMIGSLCSRGKLDLALKV 211

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  ++                     P   ++ I+I   + +G +D AL L  EM   G 
Sbjct: 212 LDQLLSD----------------NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGL 255

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN +I G+C    ++ ++E++R +E  G +P   + N + R L  +        
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ KM  +  +P V   ++LI  LC+ GK  EA   L  M ++G  PD   Y   I    
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+D+A+E    + + GC PD+V YN +++ LCK  +  +A ++F ++   G  P+ +
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN + +    SG+  +A+  +  M+      PD ITY ++I  LC  G  D A  L  +
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSN-GIDPDEITYNSMISCLCREGMVDKAFELLVD 494

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           M      P+ +T+  ++ G CK  R   A+     M   G +P+   +  LI  
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 223/474 (47%), Gaps = 60/474 (12%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E    P+ ++YN L+   CK   +D     L  M+   +  D  T   ++   C+ G+ D
Sbjct: 147 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 206

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            AL V ++++                                 D+C   +   T+ +LI 
Sbjct: 207 LALKVLDQLLS--------------------------------DNCQPTV--ITYTILIE 232

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
             + +  VD+AL+L D+M   G   D   Y+ II G+CK   ++ A ++   ++  G  P
Sbjct: 233 ATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEP 292

Query: 239 D---FEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           D   + IL + + +    +EGE  L+ K   E  D N +T   + ++  L  +G I++A 
Sbjct: 293 DVISYNILLRALLNQGKWEEGE-KLMTKMFSEKCDPNVVTY--SILITTLCRDGKIEEAM 349

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           NLL+               LM  KG ++P+  S+D +I    ++G+LD+A+     M   
Sbjct: 350 NLLK---------------LMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC+ ++  YN ++  LC + + +++ E+  ++ E G  P   + N+MF  L    D + A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453

Query: 414 LNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           L+++ +M   G +P  + +N++ I  LC+ G   +AF  L DM    F P +V Y+  + 
Sbjct: 454 LHMILEMVSNGIDPDEITYNSM-ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           G     R++ A+++   +  +GC P+   Y ++I G+  A   AEA +L N+++
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 193/404 (47%), Gaps = 20/404 (4%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C++     +L L   M   G  PD  + +KLI     +G  TL        R+V      
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLI-----KGFFTL--------RNVPKAV-- 140

Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              +M IL   G  D  AYN L+    K   I D    +  +     SP+T +++I+I +
Sbjct: 141 --RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 198

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLDLAL +  ++    C   V  Y  LI+       ++E+ +LL EM   G KP 
Sbjct: 199 LCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            FT N++ R +C+   V  A  ++R + ++G EP V    +L++ L   GK  E  + +T
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M  E   P++V YS  I  L    +++ A+ L + +   G  PD  +Y+ +I+  C+  
Sbjct: 319 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 378

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+  A +    MI+ G +P +  YN ++   CK+G  DQA+    ++ E    SP+  +Y
Sbjct: 379 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSY 437

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            T+   L  +G    A+ +  EM   G  P+ IT+ ++I+ LC+
Sbjct: 438 NTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCR 481



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 200/453 (44%), Gaps = 24/453 (5%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           R  P  V   ++++   F  P    +  LI     +  +++A  + D+++ +    P+  
Sbjct: 134 RNVPKAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTV 190

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN ++ +LC    +DL    L ++          T T L++     G  D+AL + +E+
Sbjct: 191 TYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM 250

Query: 128 IDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G   D   ++ ++    K G VD+A E+I  ++      +  ++ +L+   + + + 
Sbjct: 251 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKW 310

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           ++  +L  KM       +   Y ++I  LC++ ++E A+ L   MK  G+TPD      L
Sbjct: 311 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 370

Query: 247 ITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           I +   EG L + ++  E           +  N+++  L  NG  DQA  +   +     
Sbjct: 371 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL----- 425

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
             +VG           SPN+SS++ + + L   G    AL +  EM   G   +   YN+
Sbjct: 426 -GEVGC----------SPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I  LC    +++++ELL +M    F P+  T N +    C+   +  A++++  M   G
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             P     T+LI+ +   G   EA     D+V+
Sbjct: 535 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 161/659 (24%), Positives = 288/659 (43%), Gaps = 73/659 (11%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           + +P  Y+Y+ L++  C++  +DL       +   G   D   ++ LL+  C++ + D+A
Sbjct: 98  VALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEA 157

Query: 121 LSV-FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD-------DCNIRLNEK 171
           + V F+ + + G V + + +S +L +    G    A +++ RM         CN+ +   
Sbjct: 158 VDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL-RMAVKQGGGCPCNVVV--- 213

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            +  ++HG  K+ +V +A  LF +MT+ G   +   Y+ +I  LCK + ++ A  +  +M
Sbjct: 214 -YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQM 272

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSI 289
            G+G+ PD    + LI   S  G+    V+   E   R V   T+ C++ +  L  +G I
Sbjct: 273 VGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRI 332

Query: 290 DQAYNLLQAM---------------IKGEPIADVGVEM-----LMIFKGTVSPNTSSFDI 329
           ++A     +M               + G   A   V+M     LM+  G V PN   F+I
Sbjct: 333 EEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV-PNQHVFNI 391

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++N   K G +  A+ +F +M + G   +V  Y  +I   C    ++++ +    M + G
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM--- 446
            +P       + +  C   D+V A  LV ++R +G  P +     LI  LCK G+     
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 447 --------------------------------EAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                                           EAFR    MV  G  PDIV Y   + G 
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R+D  L LFR++   G  P    Y II+ GL  A R A A+++F EMI  G+  ++
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY++L+ G C++   ++A+    ++        D++    +I  +  A R ++A  L+ 
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNV-KFDIVILNIMISKMFKARRREEAEGLFA 690

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            + + G  P   T+  ++  L K      A   F +M + G+ P       ++   L +
Sbjct: 691 SIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEK 749



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 245/579 (42%), Gaps = 96/579 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA  LF ++ ++G+  PN  +YN ++ ALCK+ +VD  +  L++M   G   D  T
Sbjct: 225 GKVGEACDLFHEMTQQGV-PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVT 283

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF-SKWGEVDKACELIERM- 161
              L+  Y   GQ+ +A+ +F E+   G +   V     VAF  K G +++A E  + M 
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343

Query: 162 -------------------------DDCN---------IRLNEKTFCVLIHGFVKKSRVD 187
                                    D  N         I  N+  F +L++G+ K   V 
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A+ +F+ M K G   D   Y  +I   C+   ++ A+  ++ M   G+ P+F +   LI
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463

Query: 248 TSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                 G+L    + ++E R+  +    L   S++  L   G + +A  +   +I+    
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
           ADV +                F  +I+     GK+  A  +   M  +G   ++  Y  L
Sbjct: 524 ADVNI----------------FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           ++G C + R+++   L RE+   G KPT FT                             
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYG--------------------------- 600

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
                   +++  L   G+   A     +M++ G    I  YS  + GL      + A+ 
Sbjct: 601 --------IILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           +F+ +CA     D+V  NI+IS + KA+R  EAE LF  +   GL+P+V TY +++    
Sbjct: 653 VFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLI 712

Query: 546 KSGNIDQAMLCLSRMLEKESGSP-----DVITYTTLIDG 579
           K G++++A    S ML K   SP     +VI  T L  G
Sbjct: 713 KEGSVEEAEGVFSVML-KSGLSPTSHFINVIVRTLLEKG 750



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 225/520 (43%), Gaps = 27/520 (5%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ-LYSE 230
           T+ +LI    +  R+D A   F  + + G  +D  +   ++ GLC  K+ + A+  L+  
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHR 164

Query: 231 MKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           M   G  PD    S ++ S  D+G     L +L   + +        ++ ++++  L   
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKE 224

Query: 287 GSIDQAYNLLQAMIK-GEPIADV-------------------GVEMLMIFKGTVSPNTSS 326
           G + +A +L   M + G P   V                   G+   M+  G V P+  +
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG-VQPDNVT 283

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I+     G+   A+ +F+EMT  G + N    +  +  LC   R+EE+ E    M 
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G K    + +++         +V   NL   M   G  P      +L+    K G   
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA     DM + G  PD++ Y A I     +  +D A++ F  +   G  P+   Y  +I
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G C    + +AE+L  E+  KGL P + ++  LIN  CK G + +A      M+ +   
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFD-MIIRTGE 522

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             DV  +T+LIDG C+ G+  +A  + + M   G  P+ +T+  L+ G CK  R    L+
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            FR +  KG+KP  F +  ++           A E+ +EM
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 164/351 (46%), Gaps = 43/351 (12%)

Query: 342 LALSLFREM-TQIG---CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           LA++LF  M T  G    +  V+ Y+ LID  C + RL+ ++     +   G K     +
Sbjct: 82  LAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVV 141

Query: 398 NSMFRCLCRRQDVVGALN-LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           +S+ R LC  +    A++ L  +M   G  P     + ++K +C  G++  A   L   V
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 457 -QEGFLP-DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
            Q G  P ++V YS  + GL    +V  A +LF ++   G  P+VV YN +I  LCKA+ 
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGW------------------------------ 544
           V +A+ +  +M+  G+ P   TYN LI+G+                              
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCST 321

Query: 545 -----CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
                CK G I++A      ML K     ++I+Y+TL+ G   AG   D   L+N M   
Sbjct: 322 FVAFLCKHGRIEEAREFFDSMLAK-GHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRD 380

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G  PN+  F  L+ G  KC   R A+  F  M+++G+ PD+  ++A+I AF
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 2/208 (0%)

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LP +  YS  I      +R+DLA   F  +   G   DV+  + ++ GLC A+R  EA D
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 521 -LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLID 578
            LF+ M   G +P   +Y+ ++   C  G    A+  L   +++  G P +V+ Y+T++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL   G+  +A  L++EM ++G  PN +T+ ++I  LCK      A    R M   G++P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   +  LI  + +      A  + KEM
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEM 307



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +++  +LF ++  +G+  P  ++Y  +L+ L  +      +   +EM + G      T
Sbjct: 575 GRIDDGLILFRELLHKGV-KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + LL   C +   ++A++VF ++       D  + +I++    K    ++A  L   + 
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIP 693

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D  +    +T+ +++   +K+  V++A  +F  M KSG +  +   +VI+  L +  ++ 
Sbjct: 694 DYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIV 753

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A      + G  I  +    S L++  S +G+
Sbjct: 754 KAGIYMCRVDGKSILFEASTASMLLSLFSCKGK 786


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 172/670 (25%), Positives = 302/670 (45%), Gaps = 61/670 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+ L   G + +A  +F ++K+     P+  +Y  LL+    +     V      M+  
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD 364

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G+  +    T ++   C  G+  +AL +F+E+   G V E + ++ L+  F K      A
Sbjct: 365 GYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDA 424

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + MD    + N  T  + I+ + K     KA+Q ++ M   G   D    + ++ G
Sbjct: 425 LELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 484

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
           L K+ +L MA +++ E+K  G++PD    + +I  CS   +    VK  ++  + N +  
Sbjct: 485 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 544

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAM--IKGEP--------IADVGVE---------ML 313
            L  NS++  L   G  D+A+ +   +  +  EP        +A +G E         + 
Sbjct: 545 VLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE 604

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            ++     PN  +++ I++ L K+G ++ AL +   MT  GC+ ++  YN +I GL    
Sbjct: 605 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 664

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ---------- 423
           R  E++ +  +M++    P + TL ++     +   +  AL++++   +Q          
Sbjct: 665 RYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 723

Query: 424 -----------GHEPWVKHNTL---------------LIKELCKHGKAMEAFRFLTDMVQ 457
                      G E  ++   +               LIK LCK  KA+EA   +     
Sbjct: 724 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 783

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G       Y++ I GL+D   +D+A  LF ++   GC PD   YN+++  + K+ R+ E
Sbjct: 784 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 843

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
              +  EM  KG   +  TYN +I+G  KS  ++QA + L   L  +  SP   TY  L+
Sbjct: 844 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA-IDLYYNLMSQGFSPTPCTYGPLL 902

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DGL  AGR +DA  L+NEM E GC  N   +  L+ G             F+ M ++G+ 
Sbjct: 903 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 962

Query: 638 PDMFVFVALI 647
           PD+  +  +I
Sbjct: 963 PDIKSYTIII 972



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 272/630 (43%), Gaps = 53/630 (8%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K R   +  +  +++  +   G V +   +FD ++R+ +   N  ++  +   L     +
Sbjct: 118 KPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGL 176

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSIL 141
               + L  M++ G   + YT   L+     SG   +AL V+  ++  G V     +S+L
Sbjct: 177 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVL 236

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +VAF K  +V+    L+  M+   ++ N  ++ + I    +  R D+A ++  KM   G 
Sbjct: 237 MVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGC 296

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   + V+I  LC   ++  A  ++ +MK S   PD      L+    D G+ +  V 
Sbjct: 297 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD-SQSVM 355

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           EIW                     N      YN                           
Sbjct: 356 EIW---------------------NAMKADGYN--------------------------- 367

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N  ++  +I+ L + G++  AL +F EM Q G +   + YN+LI G   ++R  ++ EL
Sbjct: 368 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALEL 427

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            + M+  G KP  +T         +  + + A+     M+ +G  P V     ++  L K
Sbjct: 428 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 487

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+   A R   ++   G  PD + Y+  I       + D A+++F D+  + C PDV+A
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 547

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            N +I  L KA R  EA  +F ++    L P+  TYN L+ G  + G + + M  L  M 
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 607

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P++ITY T++D LC  G  +DA+ +   M  KGC P+  ++  +I GL K +R 
Sbjct: 608 HSNY-PPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERY 666

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFL 651
             A   F  MK K + PD      ++ +F+
Sbjct: 667 NEAFSIFCQMK-KVLIPDYATLCTILPSFV 695



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 232/536 (43%), Gaps = 27/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +       G +  A   +  M +  I LN  T+  L++  VK     +AL+++  M
Sbjct: 162 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 221

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDE 253
              G       Y V++    K + +E  L L  EM+  G+ P+   + I  +++      
Sbjct: 222 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 281

Query: 254 GELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   ++ ++  +    DV T T+L    +++L   G I  A ++   M K +       
Sbjct: 282 DEAYRILAKMENEGCKPDVITHTVL----IQVLCDAGRISDAKDVFWKMKKSDQ------ 331

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+  ++  +++    +G     + ++  M   G   NV  Y  +ID LC
Sbjct: 332 ----------KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 381

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R+ E+ E+  EM++ G  P  ++ NS+     +      AL L + M + G +P   
Sbjct: 382 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 441

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            + L I    K G++++A +    M  +G +PD+V  +A + GL    R+ +A  +F ++
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 501

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y ++I    KA +  EA  +F +MI    +P V   N LI+   K+G  
Sbjct: 502 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 561

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A     ++ E     P   TY TL+ GL   G+  + + L  EM      PN IT+  
Sbjct: 562 DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 620

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++  LCK      AL     M  KG  PD+  +  +I   + E     AF +  +M
Sbjct: 621 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 676



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 143/603 (23%), Positives = 276/603 (45%), Gaps = 65/603 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQD 94
           +I  L  VG V EA  +FD++K++G+ VP  YSYN L+    K+    D +E+  K M  
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGI-VPEQYSYNSLISGFLKADRFGDALEL-FKHMDI 433

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDK 153
           +G   + YT    +  Y  SG+  KA+  +  +   G V + V  + +L   +K G +  
Sbjct: 434 HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGM 493

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  +   +    +  +  T+ ++I    K S+ D+A+++F  M ++    D    + +I 
Sbjct: 494 AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLID 553

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE-DRDV 269
            L K  + + A +++ ++K   + P     + L+     EG   E+  L++E++  +   
Sbjct: 554 TLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 613

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF------------- 316
           N +T   N+I+  L  NG+++ A ++L +M     I D+     +I+             
Sbjct: 614 NLITY--NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFS 671

Query: 317 -----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE-MTQIGCMQNVFLYNNLIDGLC 370
                K  + P+ ++   I+ + +K G +  AL + ++   Q G   +    ++L++G+ 
Sbjct: 672 IFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGIL 731

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK----------- 419
               +E+S E    +  SG     F L  + + LC+++  + A  LV+K           
Sbjct: 732 KKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTG 791

Query: 420 ------------------------MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
                                   M+  G  P      LL+  + K  +  E  +   +M
Sbjct: 792 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 851

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            ++G+    V Y+  I GL+  +R++ A++L+ ++ + G  P    Y  ++ GL KA R+
Sbjct: 852 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 911

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +AE+LFNEM+  G   +   YN+L+NG   +GN ++       M++ +  +PD+ +YT 
Sbjct: 912 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD-QGINPDIKSYTI 970

Query: 576 LID 578
           +ID
Sbjct: 971 IID 973



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 147/646 (22%), Positives = 257/646 (39%), Gaps = 100/646 (15%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN YSY   +  L ++   D     L +M++ G   D  T T L+QV C++G+   A  V
Sbjct: 263 PNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDV 322

Query: 124 FNEIIDHGWVDEHVFSI-LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F ++       + V  I LL  F   G+     E+   M       N   +  +I    +
Sbjct: 323 FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ 382

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV +AL++FD+M + G   +   Y+ +I G  K  +   AL+L+  M   G  P+   
Sbjct: 383 VGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 442

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQA---YNLLQ 297
               I      GE    ++  E+ + + +    +  N+++  L  +G +  A   ++ L+
Sbjct: 443 HVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 502

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           AM                    VSP+T ++ ++I    K  K D A+ +F +M +  C+ 
Sbjct: 503 AM-------------------GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 543

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V   N+LID L  + R +E++ +  +++E   +PT  T N+                  
Sbjct: 544 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNT------------------ 585

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
                            L+  L + GK  E    L +M    + P+++ Y+  +  L   
Sbjct: 586 -----------------LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKN 628

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             V+ AL++   +   GC PD+ +YN +I GL K +R  EA  +F +M  K LIP  AT 
Sbjct: 629 GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATL 687

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
             ++  + K G + +A+  +     +     D  +  +L++G+      + +I     + 
Sbjct: 688 CTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIA 747

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVH------------------------------ 627
             G   +      LI  LCK  + +A   H                              
Sbjct: 748 SSGITLDDFFLCPLIKHLCK--QKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 805

Query: 628 -------FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                  F  MKE G  PD F +  L+ A    +      +V +EM
Sbjct: 806 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 851



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 201/471 (42%), Gaps = 24/471 (5%)

Query: 6   SRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
           S+A +      +  D++++ C     A+  LI  L   G  +EA  +F Q+K   L  P 
Sbjct: 521 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL-EPT 579

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
           + +YN LL  L +   V  V   L+EM    +  +  T   +L   C +G  + AL +  
Sbjct: 580 DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLY 639

Query: 126 EIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
            +   G + D   ++ ++    K    ++A  +  +M    I  +  T C ++  FVK  
Sbjct: 640 SMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIG 698

Query: 185 RVDKALQLF-DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            + +AL +  D   + G  +D +    ++ G+ K   +E +++    +  SGIT D   L
Sbjct: 699 LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 758

Query: 244 SKLITS-CSDEGELTL--LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             LI   C  +  L    LVK+ ++   V+  T L NS++  LV    ID A  L   M 
Sbjct: 759 CPLIKHLCKQKKALEAHELVKK-FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM- 816

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 ++G            P+  +++++++ + K  +++  L +  EM + G      
Sbjct: 817 -----KELG----------CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 861

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN +I GL  S RLE++ +L   +   GF PT  T   +   L +   +  A NL  +M
Sbjct: 862 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 921

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
              G +       +L+      G   +      DMV +G  PDI  Y+  I
Sbjct: 922 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 181/724 (25%), Positives = 309/724 (42%), Gaps = 85/724 (11%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIR---------CLGSVG-LVEEAN 50
           + +++SR R I   R L   ++    F S   L   +           L SV  +++EA 
Sbjct: 48  LETLISRGRTITARRFLRSLLLTKTAFSSLSELHAHVSKPFFSDNLLWLCSVSKMLDEAT 107

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
            L+  ++++G  VP+  S N LL  L  S   +       ++ D G   D       +Q 
Sbjct: 108 DLYSTMRKDGF-VPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQA 166

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
                  DK   +   ++  G       ++++L    K   +  A +L + M   N+  N
Sbjct: 167 AVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPN 226

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  LI G+ K   +++AL   ++M +     +   Y+ ++ GLC + +++ A ++  
Sbjct: 227 TVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLL 286

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLL-VKEIWEDRDVNTMTLLCNSIMRI------ 282
           EM+GSG  P   +        +  G+  L   KEI  D    T  +L N + R+      
Sbjct: 287 EMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDE--RTYCILLNGLCRVGRIEKA 344

Query: 283 ------LVSNGSIDQ--AYNLL-----------QAMIKGEPIADVGVEMLMIFKGTVSPN 323
                 LV NG      +YN+L           +A++  E + + G+E          PN
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLE----------PN 394

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +F+ +I+   + G++D A +  R M + G    V  YN+LI+G          +E L 
Sbjct: 395 RITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLD 454

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM+++G KP   +  S+  CLC+ + ++ A  ++  M  +G  P  +   +LI+  C   
Sbjct: 455 EMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLS 514

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +AFRF  +M+Q G    +V Y+  I GL    RV  A +LF  +   GC PDV+ YN
Sbjct: 515 KLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYN 574

Query: 504 IIISGL----------------------------------CKAQRVAEAEDLFNEMITKG 529
            +ISG                                   C+ + V   + +F EM+   
Sbjct: 575 SLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMD 634

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L+P    YN +I  + + GN+ +AM    +M++ +    D +TY +LI       R  + 
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVD-QGVDCDKVTYNSLILAYLRDRRVSEI 693

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L ++M+ KG  P   T+  LI GLC       A   +R M E+G+  ++ +   LIS 
Sbjct: 694 KHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISG 753

Query: 650 FLSE 653
              E
Sbjct: 754 LREE 757



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/589 (24%), Positives = 269/589 (45%), Gaps = 50/589 (8%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M+  G+     ++  LL+   +S  F+K L+VF ++ID G   + V          +G+ 
Sbjct: 113 MRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV---------AYGKA 163

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A  +++ +D                         K  +L   M K G       Y+++
Sbjct: 164 VQAAVMLKDLD-------------------------KGFELMKSMVKDGMGPSVFAYNLV 198

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDV 269
           +GGLCK ++++ A +L+ EM    + P+    + LI      G  E  L  KE  ++++V
Sbjct: 199 LGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNV 258

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAM-----IKGEPIADV------GVEMLMIFKG 318
               +  NS++  L  +G +D A  +L  M     + G  ++ V      G     +F G
Sbjct: 259 ECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDG 318

Query: 319 T-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             +  +  ++ I++N L + G+++ A  +  ++ + G   +   YN L++  C    +++
Sbjct: 319 KEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKK 378

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +     +MEE G +P   T N++    C   +V  A   VR+M  +G  P V+    LI 
Sbjct: 379 AILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN 438

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
              + G  +  F FL +M + G  P+++ Y + I  L   +++  A  +  D+   G  P
Sbjct: 439 GYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +   YN++I   C   ++ +A   F+EMI  G+  ++ TYN LING  ++G + +A    
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M  K   +PDVITY +LI G   +      + L+++M+  G  P   TF  LI   C+
Sbjct: 559 LQMAGK-GCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CR 616

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +        F+ M +  + PD FV+  +I ++  + N   A  + ++M
Sbjct: 617 KEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 216/510 (42%), Gaps = 45/510 (8%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D+A  L+  M K GF       + ++  L  ++  E  L +++++  SG  PD     K
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEP 304
            + +        +++K++  D+    M  +    M      G    AYNL L  + K   
Sbjct: 163 AVQAA-------VMLKDL--DKGFELMKSMVKDGM------GPSVFAYNLVLGGLCKVRR 207

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           I D       + +  + PNT +++ +I+   K G ++ AL     M +     N+  YN+
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNS 267

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHF----------------------------T 396
           L++GLC S R++++ E+L EME SGF P  F                            T
Sbjct: 268 LLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERT 327

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
              +   LCR   +  A  ++ K+   G  P      +L+   C+ G   +A      M 
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P+ + ++  I    +   VD A    R +   G  P V  YN +I+G  +     
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV 447

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
              +  +EM   G+ P+V +Y  LIN  CK   +  A + L+ M+ +   SP+   Y  L
Sbjct: 448 RCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR-GVSPNAEIYNML 506

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I+  C   +  DA   ++EM + G     +T+  LI GL +  R + A   F  M  KG 
Sbjct: 507 IEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD+  + +LIS +   +N     E+  +M
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKM 596



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 252/587 (42%), Gaps = 49/587 (8%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + RRI   R L  ++++     +      LI     VG +EEA + F +  +E     
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEA-LGFKERMKEQNVEC 260

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW---GY---------------------- 99
           N  +YN LL  LC S  VD     L EM+  G+   G+                      
Sbjct: 261 NLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKE 320

Query: 100 ---DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D+ T   LL   C  G+ +KA  V  +++++G     + ++IL+ A+ + G+V KA 
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
              E+M++  +  N  TF  +I  F +   VD A     +M + G +     Y+ +I G 
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTL 274
            +        +   EM  +GI P+      LI   C D     L+  EI          +
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR---KLIDAEI----------V 487

Query: 275 LCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           L + I R +  N  I   YN+L +A      + D       + +  +     +++ +IN 
Sbjct: 488 LADMIGRGVSPNAEI---YNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L ++G++  A  LF +M   GC  +V  YN+LI G   S   ++  EL  +M+  G KPT
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T + +    CR++ VV    + ++M      P       +I    + G  M+A     
Sbjct: 605 VGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQ 663

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            MV +G   D V Y++ I   +  +RV     L  D+ A G  P V  YNI+I GLC  +
Sbjct: 664 QMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLK 723

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
               A   + EM+ +GL+ +V+    LI+G  + G + +A +  S +
Sbjct: 724 DFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSEL 770


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 251/545 (46%), Gaps = 72/545 (13%)

Query: 185  RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            +++ A++LFD+   S        ++ ++  + K         +Y ++   GI PD   L+
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 245  KLITSC----------------------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
             LI  C                       D   +T LVK +W +  +     L + + + 
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK- 1044

Query: 283  LVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                G +  A     L+  + K      + +++    KG    +  ++ +II+ L KDG 
Sbjct: 1045 ---KGLLGDAKTYGILINGLCKARKTG-LAIKLHEKMKGNCKGDVFTYGMIIDALCKDGM 1100

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               AL +F EM   G + +V +Y++L+DGLC   RL+E+ E  +EME  G     +T NS
Sbjct: 1101 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 1160

Query: 400  MFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            +   L R    ++V   LNL   M  +G  P     T+LI  LCK GK  EA + L  M 
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNL---MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217

Query: 457  QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             +G  PDI+ Y+  + GL  + +++ A +LF  +   G   +V +YNI+I+G CK Q++ 
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277

Query: 517  EAEDLFNEMITKGLIPSVATYNLLI----------------------------------- 541
            EA   F EM  KGL PS  TYN LI                                   
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337

Query: 542  NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            +G CK+G++++AM  L + ++K    P++  ++ L+DG+C AG+ ++A   ++E+ + G 
Sbjct: 1338 DGLCKNGHLEEAM-DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396

Query: 602  APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
             P+ I +  LI GLC       A+     M+EKG  PD   F  +I   L E     A +
Sbjct: 1397 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 1456

Query: 662  VLKEM 666
            +L+EM
Sbjct: 1457 LLEEM 1461



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 251/529 (47%), Gaps = 36/529 (6%)

Query: 64   PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ-VYCNSGQFDKALS 122
            P+ Y+ N L+   C   +V             G+  D  T+T L++ V+  +G  D A+ 
Sbjct: 979  PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPD-AVQ 1037

Query: 123  VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +F+E+   G + D   + IL+    K  +   A +L E+M   N + +  T+ ++I    
Sbjct: 1038 LFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALC 1096

Query: 182  KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            K     +AL +F +M  +G   D  +Y  ++ GLC+  +L+ AL+ + EM+G GI+ D  
Sbjct: 1097 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 1156

Query: 242  ILSKLITSCSDEG---ELTLLVKEIWEDR----DVNTMTLLCNSIMRILVSNGSIDQAYN 294
              + LI   S  G   E+T  +  +  DR    D  T T+L +     L   G + +A  
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLN-LMVDRGFSPDAFTFTILIDG----LCKEGKVGEAQQ 1211

Query: 295  LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
            +L+               LM  KG   P+  +++ ++N L   G+L+ A  LF  +   G
Sbjct: 1212 ILE---------------LMRHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 355  CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
               NVF YN LI+G C   +++E++    EM   G KP+  T N++   LC+   V  A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 415  NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
             L  +M+  G    +    +L+  LCK+G   EA      + +    P+I  +S  + G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 475  IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                +++ A + F +I  +G  PD +AYNI+I+GLC    ++EA  L  +M  KG +P  
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435

Query: 535  ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
             T+N++I    K   I +A+  L  M  + + SPD    + L   LC+A
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNR-NFSPDEAVTSML---LCLA 1480



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 4/204 (1%)

Query: 46   VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            ++EA   F++++ +GL  P+  +YN L+ ALC+S  V   +    EMQ  G      T  
Sbjct: 1276 IDEAFRFFEEMRPKGL-KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334

Query: 106  PLLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
             LL   C +G  ++A+ +F  I   +H   +  VFSILL    + G++++A +  + +  
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHK-PNIEVFSILLDGMCRAGKLEEAWKQFDEISK 1393

Query: 164  CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
              +  +   + +LI+G   K  + +A++L  +M + G   D+  ++VII  L K  ++  
Sbjct: 1394 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 1453

Query: 224  ALQLYSEMKGSGITPDFEILSKLI 247
            A+QL  EM+    +PD  + S L+
Sbjct: 1454 AIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)

Query: 17   LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
            L Q + K+    +      L+  +   G +EEA   FD++ + GL  P+  +YN L+  L
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL-EPDTIAYNILINGL 1410

Query: 77   CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DE 135
            C    +      L +M++ G   D  T   ++Q      +  +A+ +  E+ +  +  DE
Sbjct: 1411 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 1470

Query: 136  HVFSILL 142
             V S+LL
Sbjct: 1471 AVTSMLL 1477


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 227/469 (48%), Gaps = 25/469 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD A+  F++M           ++ I+    K K    A+ L   ++  GI PD   L+ 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 246 LITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G++T    +L K +      +T+TL  N++++ L   G + +A +    ++ 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTL--NTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G ++          N  S+  +IN + K G    A+ L R++       NV +
Sbjct: 158 Q------GFQL----------NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 201

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +ID LC    + E+Y L  EM   G      T +++    C    +  A+ L+ +M 
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P V    +L+  LCK GK  EA   L  M++    PD++ YS  + G   +  V 
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  +   G  PDV  Y I+I+G CK + V EA +LF EM  K ++P + TY+ LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G CKSG I      +  M  ++ G P DVITY++LIDGLC  G  D AI L+N+M+++ 
Sbjct: 382 DGLCKSGRIPYVWDLIDEM--RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             PN  TF  L+ GLCK  R + A   F+ +  KG   +++ +  +I+ 
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 238/525 (45%), Gaps = 26/525 (4%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        + F+ +L +F+K      A  L  R++   I+ +  T  +L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F    ++     +  K+ K G+  D    + +I GLC   Q++ AL  + ++   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 237 TPDFEILSKLITSC----SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
             +    + LI          G + LL K   + R       + ++I+  L     + +A
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRK--IDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 293 YNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           Y L   M +KG                 +S +  ++  +I     +GKL  A+ L  EM 
Sbjct: 219 YGLFSEMTVKG-----------------ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
                 NV+ YN L+D LC   +++E+  +L  M ++  KP   T +++        +V 
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++   M + G  P V   T+LI   CK+    EA     +M Q+  +P IV YS+ I
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL    R+    +L  ++   G   DV+ Y+ +I GLCK   +  A  LFN+M  + + 
Sbjct: 382 DGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P++ T+ +L++G CK G +  A      +L K     +V TY  +I+G C  G  ++A+ 
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + ++ME+ GC PN  TF  +I  L K D    A    R M  +G+
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 225/469 (47%), Gaps = 15/469 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  + N L+   C    +      L ++   G+  D  TL  L++  C  GQ  KAL  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++++  G+ +++  ++ L+    K G+   A +L+ ++D    + N + +  +I    K
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 211

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V +A  LF +MT  G ++D   Y  +I G C   +L+ A+ L +EM    I P+   
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + L+ +   EG+       + E + V    +L   +   +++  ++   Y L+  + K 
Sbjct: 272 YNILVDALCKEGK-------VKEAKSV-LAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           + + +      M   G V+P+  ++ I+IN   K+  +D AL+LF+EM Q   +  +  Y
Sbjct: 324 QHVFNA-----MSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           ++LIDGLC S R+   ++L+ EM + G      T +S+   LC+   +  A+ L  KM+ 
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           Q   P +   T+L+  LCK G+  +A     D++ +G+  ++  Y+  I G      ++ 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           AL +   +  +GC P+   +  II  L K     +AE L  +MI +GL+
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 160/361 (44%), Gaps = 34/361 (9%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A+S F  M  +     +  +N ++D          +  L   +E  G +P   TLN 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  C C    +    +++ K+  +G+ P       LIK LC  G+  +A  F   ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F  + V Y+  I G+  I     A++L R I      P+V  Y+ II  LCK Q V+EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML------------------ 561
            LF+EM  KG+   V TY+ LI G+C  G + +A+  L+ M+                  
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 562 -----EKESGS-----------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
                 KE+ S           PDVITY+TL+DG  +      A  ++N M   G  P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            T+  LI G CK      AL  F+ M +K M P +  + +LI         P  ++++ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 666 M 666
           M
Sbjct: 400 M 400



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 1/190 (0%)

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I+ VD A+  F  +      P ++ +N I+    K +  + A  L + +  KG+ P + T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+LIN +C  G I      L+++L K    PD +T  TLI GLC+ G+   A+   +++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKIL-KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             +G   N++++  LI G+CK    R A+   R +  +  KP++ ++  +I A       
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 657 PLAFEVLKEM 666
             A+ +  EM
Sbjct: 216 SEAYGLFSEM 225


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 284/639 (44%), Gaps = 38/639 (5%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PL     DVV   CF                G+ ++A  LFD++    +  P+    +  
Sbjct: 174 PLDAWMFDVVMRACFKE--------------GMYDDAVRLFDEMPASEI-EPDQRVCSVA 218

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           + +LCK    +   + L++MQD G+    +T   ++ V    G+ ++AL + +E++  G 
Sbjct: 219 IASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK 278

Query: 133 VDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V  + L+  +    EV KA ++ E      +   + T+ VLI G  ++   +KA +
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L  +M   G       ++++I GL  +K  + A+ L+ EM  SGI PD    + LI    
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 252 DEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              ++   +  +WE   +  V    +  +S++     NG +D+A  L   M         
Sbjct: 398 QRRKIREALN-LWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG------- 449

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   KG  +PN  ++  ++   +     D A +L  EM Q G   N + YN LI+G
Sbjct: 450 --------KG-FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC   R+ E  E+L+  E  GF PT  T NS+     +   +  A  + ++M  +G  P 
Sbjct: 501 LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPN 560

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           +   T  I   CK      A + L D+  +G  PDI  Y++ I G      +  AL++  
Sbjct: 561 IVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLV 620

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G  P++  YN  I+G    + + EA   + +MI +G+    ATY  LI+G+ K G
Sbjct: 621 LMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDG 680

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           N+  A+   S M+ K    PD IT+T L  GLC  G  DDA  L +EM      PN + +
Sbjct: 681 NVTFALKLYSEMVAK-GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             LI G  +  + + A      M E+ + PD   +  L+
Sbjct: 740 NMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 272/603 (45%), Gaps = 34/603 (5%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWG 149
           EM+  G   D +    +++     G +D A+ +F+E+       D+ V S+ + +  K  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           + ++A  ++ +M D      + TF  ++   VK  R+++AL + D++  +G      +  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDR 267
            ++ G C  +++  AL ++ E    G+ P     + LI  C++EG  E    +     D 
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV----------------- 310
            +   T   N +++ L+++     A +L + M      AD G+                 
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM------ADSGIPDAFTYNILIHWLCQRR 400

Query: 311 ---EMLMIFKGTVSPNTSSFDIIINTLL----KDGKLDLALSLFREMTQIGCMQNVFLYN 363
              E L +++         + +  ++LL     +G +D A+ L+ EM   G   NV  Y 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+ G  N    +++Y LL EM+++G     +T N++   LC    V     ++++   +
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       +I    K G    AF     M  +G  P+IV Y++ I G       DLA
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++  D+   G  PD+ AYN +I G C+   ++ A  +   M+  GL+P+++ YN  I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +     +++A+    +M+ KE    D  TYTTLIDG    G    A+ L++EM  KG  P
Sbjct: 641 YKNLKMMEEALRFYEKMI-KEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           + ITF AL  GLC+      A      M    ++P++ ++  LI+ +L       AF + 
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLH 759

Query: 664 KEM 666
            EM
Sbjct: 760 DEM 762



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 187/450 (41%), Gaps = 27/450 (6%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S      +I+ L +  L ++A  LF ++   G  +P+ ++YN L+  LC+   +      
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNL 408

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            ++M + G      T   LL  YC +G  D+A+ ++ E+   G+    V ++ L+     
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
               DKA  L+  M    +  N+ T+  LI+G     RV +  ++  +    GF   A  
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMT 528

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKE 262
           Y+ II G  K   +  A  +Y +M   GI P+    +  I     TSC D   L L +  
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD---LALKMLN 585

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
               + +       NS++      G++  A  +L                +++ K  + P
Sbjct: 586 DVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL----------------VLMLKDGLLP 629

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N S ++  I        ++ AL  + +M + G   +   Y  LIDG      +  + +L 
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM   G  P H T  ++   LCR  D+  A  L+ +M      P V    +LI    ++
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           GK  EAFR   +M++   +PD   Y   +G
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILVG 779


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 266/552 (48%), Gaps = 30/552 (5%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L+ L++  C +G+   A    +   D   V    ++ ++  + + G+V  A  L   +  
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAGV--VAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  N  T+  ++     +  +  AL + D+M   G A+   M  VI+   C+      
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A++    +   G T              D G   L+V  I E   V+        ++R L
Sbjct: 162 AVRALQVLHAKGCT-------------LDSGNCNLVVSAICEQGCVDEGV----ELLRKL 204

Query: 284 VSNGSIDQ--AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
            S G      +YN +L+ +   +   DV   M+ + +    PN ++F+ +I  L ++G  
Sbjct: 205 PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLF 264

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           +       +M + GC  ++ +Y  +IDG+C     E + ++L  M   G KP     N++
Sbjct: 265 EQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTV 324

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPW--VKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            + LC  +    A +L+ +M  Q   P   V  N +L+   C++G        L  M++ 
Sbjct: 325 LKGLCSAERWEEAEDLLAEM-FQEDCPLDDVTFN-ILVDFFCQNGLVDRVIELLEQMLEH 382

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G +PD++ Y+  I G      VD A+ L +++ A GC P+ ++Y I++ GLC+A+R  +A
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           ++L + MI +G +P+  T+N LIN  CK G ++QA+  L +ML     SPD+I+Y+T+ID
Sbjct: 443 QELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQML-VNGCSPDLISYSTVID 501

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL  AG+ ++A+ L N M  KG  PN I + ++ + L +  R    +  F  +++  ++ 
Sbjct: 502 GLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRS 561

Query: 639 DMFVFVALISAF 650
           D  ++ A+IS+ 
Sbjct: 562 DAALYNAVISSL 573



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 233/524 (44%), Gaps = 22/524 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN Y+Y  ++ +LC    +      L EM   G          +L+  C  G F  A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +   G  +D    ++++ A  + G VD+  EL+ ++       +  ++  ++ G   
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R D   +L  +M + G   + A ++ +I  LC+N   E   +  S+M   G TPD  +
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 243 LSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + +I     +G  E+   +        +    +  N++++ L S    ++A +LL  M 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 301 KGE-PIADVGVEMLMIF---KGTVS---------------PNTSSFDIIINTLLKDGKLD 341
           + + P+ DV   +L+ F    G V                P+  ++  +IN   K+G +D
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A+ L + M+  GC  N   Y  ++ GLC + R  ++ EL+  M + G  P   T N++ 
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             +C++  V  A+ L+++M V G  P +   + +I  L K GK  EA   L  M+ +G  
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+ + YS+    L    R D  +++F  I       D   YN +IS LCK      A D 
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDF 585

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           F  M++ G +P+ +TY +LI G    G + +A   LS +  + +
Sbjct: 586 FAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRA 629



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 215/493 (43%), Gaps = 25/493 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI       R   A +  D    +G A+    Y+ +I G C+  Q+  A +L + +    
Sbjct: 50  LIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103

Query: 236 ITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           + P+      ++ S    G +   L V +    R       +C+ I+      G    A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             LQ +       D G                + +++++ + + G +D  + L R++   
Sbjct: 164 RALQVLHAKGCTLDSG----------------NCNLVVSAICEQGCVDEGVELLRKLPSF 207

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC  ++  YN ++ GLC + R ++  EL+ EM   G  P   T N++   LCR       
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQV 267

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
              + +M   G  P ++    +I  +CK G    A   L+ M   G  P++VCY+  + G
Sbjct: 268 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 327

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L   +R + A +L  ++    C  D V +NI++   C+   V    +L  +M+  G IP 
Sbjct: 328 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 387

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TY  +ING+CK G +D+A++ L  M       P+ I+YT ++ GLC A R  DA  L 
Sbjct: 388 VITYTTVINGFCKEGLVDEAVMLLKNM-SACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + M ++GC PN +TF  LI  +CK      A+   + M   G  PD+  +  +I      
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 654 LNPPLAFEVLKEM 666
                A E+L  M
Sbjct: 507 GKTEEALELLNVM 519



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 37/228 (16%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L RA R    + L   +++  C  +P     LI  +   GLVE+A  L  Q+   G C P
Sbjct: 433 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG-CSP 491

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  SY+ +++ L K                                   +G+ ++AL + 
Sbjct: 492 DLISYSTVIDGLGK-----------------------------------AGKTEEALELL 516

Query: 125 NEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N +I+ G      ++S +  A S+ G  DK  ++ + + D  +R +   +  +I    K+
Sbjct: 517 NVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKR 576

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
              D+A+  F  M  +G   + + Y ++I GL     +  A  L SE+
Sbjct: 577 WETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 273/590 (46%), Gaps = 24/590 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF-NE 126
           +Y  L++  C++   DL    +  +   G        T  L+  C++ + D+A+ V  + 
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHGFVKK 183
           + +   V + + ++ ++ +        +A ++++RM     R +    +F  +IHGF K+
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             V KA  LF++M + G   D   Y+ I+  LCK + ++ A  +  +M   G+ PD    
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 244 SKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + +I   SCS   + +  +      + +   T+  +S M  L  +G    A  + Q M  
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG + P+  S+ I+++    +G+     +LF  M   G + N   
Sbjct: 366 ---------------KGHM-PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHC 409

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
            N LI        ++E+  +  EM+  G +P   T +++    CR   +  A+    +M 
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRV 480
             G EP       LI   C HG  ++A  F+++M+ +G   P+IV +S+ I  L    RV
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A ++F  +   G  P +V +N +I G C   ++ +A  + + M++ G+ P V T N L
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++G+CKSG ID  ++    ML K+   P  +TY  ++DGL  AGR   A  +++EM + G
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKV-KPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            A +  T+  L+ GLC+ D    A+  F  +     K D+ +   +I+A 
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 281/609 (46%), Gaps = 43/609 (7%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           RC  SP  + F  +I      G V +A  LF+++ ++G+ VP+  +YN +++ALCK+ ++
Sbjct: 227 RC--SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGV-VPDVGTYNSIVDALCKARAM 283

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
           D  E  L++M D G   D  T   ++  Y  SG + ++  +F ++   G + + V FS  
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           + +  K G    A E+ + M       +  ++ +L+HG+  + R      LF  M   G 
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
            S+    +++I    K   ++ A+ +++EM+G G+ P+    S LI++    G L   ++
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME 463

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           +  +     +   T + +S++     +G + +A   +  M+                KG 
Sbjct: 464 KFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMS---------------KGL 508

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN   F  II++L  +G++  A  +F  +  IG    +  +N+LIDG C   ++E+++
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M   G +P   T N++    C+   +   L L R+M  +  +P      +++  L
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            + G+   A +   +M+  G   DI  Y   + GL      D A+ LF  + A  C  D+
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 688

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
              N +I+ L K +R  EA DLF  + T GL+P+V+TY ++I    K G++++A    S 
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSS 748

Query: 560 MLEKESGSP------DVIT-------------YTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           M EK   +P      D+I              Y + +DG  I+       +L +    KG
Sbjct: 749 M-EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 807

Query: 601 CAPNRITFM 609
               +I F+
Sbjct: 808 KHREQIKFL 816



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 275/612 (44%), Gaps = 29/612 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQD 94
            ++CL      +EA  +      E  CVP+  SYN ++++LC  S S + ++M  +  ++
Sbjct: 165 FLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224

Query: 95  YGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
            G    D  +   ++  +   G+  KA ++FNE++  G V D   ++ ++ A  K   +D
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA  ++ +M D  +  +  T+  +IHG+       ++ ++F KMT  G   D   +   +
Sbjct: 285 KAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM 344

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWEDRDVN 270
             LCK+ + + A +++  M   G  PD    S L+   + EG    +  +     D+ + 
Sbjct: 345 SSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIV 404

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           +     N ++      G +D+A  +   M +G+                V PN  ++  +
Sbjct: 405 SNCHCINILISAHAKRGMMDEAMLVFTEM-QGQ---------------GVRPNVVTYSTL 448

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   + G+L  A+  F +M  IG   N  +Y++LI G C    L ++ E + EM   G 
Sbjct: 449 ISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508

Query: 391 -KPTHFTLNSMFRCLC---RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            +P     +S+   LC   R  D     NLV  +   G  P +     LI   C  GK  
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI---GDRPTIVTFNSLIDGYCLVGKME 565

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +AF  L  MV  G  PD+V  +  + G     ++D  L LFR++      P  V YNI++
Sbjct: 566 KAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVL 625

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GL +A R + A+ +F+EMI  G    + TY +L+ G C++   D+A+    ++   +  
Sbjct: 626 DGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC- 684

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             D+    T+I+ L    R ++A  L+  +   G  PN  T+  +I  L K      A  
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADT 744

Query: 627 HFRMMKEKGMKP 638
            F  M++ G  P
Sbjct: 745 MFSSMEKSGCAP 756



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 9/275 (3%)

Query: 386 EESGFKPTHFTLNS---MFRCLCR-RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           EE+G +    T+ +   +  C CR R+  +G   + R +R  G +      T  +K LC 
Sbjct: 113 EEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRA-GLKTGTIQATTFLKCLCH 171

Query: 442 HGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG--CCPD 498
             +  EA   L   + E   +PD + Y+  I  L    R   AL++ + +   G  C PD
Sbjct: 172 AKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPD 231

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV++N +I G  K   V++A +LFNEM+ KG++P V TYN +++  CK+  +D+A   L 
Sbjct: 232 VVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLR 291

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +M++K    PD +TY  +I G   +G   ++  ++ +M  KG  P+ +TF + ++ LCK 
Sbjct: 292 QMVDK-GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKH 350

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            R + A   F+ M  KG  PD+  +  L+  + +E
Sbjct: 351 GRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATE 385



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 16/306 (5%)

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG-----ALNLVRKMRVQGHEPWVK 430
           ++++ L  E+   G    + +LN     L R  D V      AL L    R+   E   +
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 118

Query: 431 HNTLLIKEL-------CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              L ++         C+  +      F+  +++ G     +  +  +  L   KR D A
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 484 LE-LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG--LIPSVATYNLL 540
           ++ L   +    C PD ++YN +I  LC   R  EA D+   M  +G    P V ++N +
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G+ K G + +A    + M++K    PDV TY +++D LC A   D A  +  +M +KG
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQK-GVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             P+ +T+ A+I G       + +   FR M  KG+ PD   F + +S+         A 
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357

Query: 661 EVLKEM 666
           E+ + M
Sbjct: 358 EIFQYM 363


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 285/615 (46%), Gaps = 27/615 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC----KSCSVDLVEM 87
           A   +++CL      ++A  +  +   E  CVP+ +SY  +L+ LC       ++DL+ M
Sbjct: 45  AANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRM 104

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
             KE  +     D  T   ++  +   G+  KA ++++E++  G+V + V  + ++ A  
Sbjct: 105 MAKE--EGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALC 162

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K   VD A  L+ +M D  +  N+ T+  +IHG+    R ++A ++F +MT  G   D  
Sbjct: 163 KARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIV 222

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIW 264
            ++  +  LCK+ + + A +++  M   G  P+      L+   + EG    ++      
Sbjct: 223 SWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM 282

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           +   +    L+   ++      G +D+A  +L  M +G+ +               SP+ 
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM-QGQGL---------------SPDV 326

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I+ L + G+L  A+  F +M   G   N  +Y++LI G C    L ++ EL+ E
Sbjct: 327 FTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYE 386

Query: 385 MEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           M  +G  +P     NS+   +C+   V+ A ++   ++  G    +     LI   C  G
Sbjct: 387 MMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVG 446

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +AF  L  M+  G  PD   Y+  + G     R+D  L LFR++      P  V YN
Sbjct: 447 EMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYN 506

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           II+ GL +A R   A+ + +EMI  G   S+ TYN+++ G C++   D+A++   ++   
Sbjct: 507 IILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM 566

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
                ++ T  T+I+ +    R ++A  L++ + + G  PN  T+  +I  L K      
Sbjct: 567 NV-KFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEE 625

Query: 624 ALVHFRMMKEKGMKP 638
           A   F  M++ G  P
Sbjct: 626 ADNMFSSMEKSGCAP 640



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 271/598 (45%), Gaps = 28/598 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  ++Y  ++   C++   +L       +   G   DK     +L+  C + + D A+ V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 124 F-NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM--DDCNIRLNEKTFCVLIHG 179
               + + G V D   ++I+L          +A +L+  M  ++     +  T+  +IHG
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K+ ++ KA  L+ +M + GF  D   ++ II  LCK + ++ A  L  +M  +G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + +I   S  G   E T + +E+   R +    +  NS M  L  +G   +A  + 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREM-TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 297 QAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            +M  KG                   PN  ++ I+++    +G     +S F  M   G 
Sbjct: 245 YSMAAKGH-----------------RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGI 287

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + N  ++  LID       ++E+  +L EM+  G  P  FT +++   LCR   +  A++
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGL 474
              +M   G +P       LI+  C HG  ++A   + +M+  G   P+I  +++ +  +
Sbjct: 348 KFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSI 407

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               RV  A  +F  +   G   D++ +N +I G C    + +A  + + MI+ G+ P  
Sbjct: 408 CKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN L+NG+ KSG ID  +     M +K+   P  +TY  ++DGL  AGR   A  + +
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKI-KPTTVTYNIILDGLFRAGRTVAAQKMLH 526

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           EM   G   +  T+  ++ GLC+ +    A+V F+ +    +K ++     +I++  +
Sbjct: 527 EMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYT 584



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 234/569 (41%), Gaps = 124/569 (21%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ-LYSE 230
           T+ V+++G  +  R +  L  F ++ ++G  +D    + ++  LC  K+ + A++ L   
Sbjct: 10  TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G  PD    S  I                               +++ L  +    
Sbjct: 70  MTELGCVPD--AFSYAI-------------------------------VLKRLCDDNRSQ 96

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           QA +LL+ M K E              G  SP+  +++ +I+   K+GK+  A +L+ EM
Sbjct: 97  QALDLLRMMAKEE--------------GVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEM 142

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM---FRCLCRR 407
            Q G + +V  +N++I+ LC +  ++ +  LLR+M ++G  P   T  SM   +  L R 
Sbjct: 143 MQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRW 202

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           ++   A  + R+M  +G  P +      +  LCKHG++ EA      M  +G  P+IV Y
Sbjct: 203 EE---ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259

Query: 468 SAAIGG-------------------------------LIDI--KR--VDLALELFRDICA 492
              + G                               LID   KR  +D A+ +  ++  
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PDV  Y+ +IS LC+  R+A+A D FN+MI  G+ P+   Y+ LI G+C  G++ +
Sbjct: 320 QGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVK 379

Query: 553 AMLCLSRMLEKESGSP-----------------------------------DVITYTTLI 577
           A   +  M+      P                                   D+I + TLI
Sbjct: 380 AKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLI 439

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG C+ G    A  + + M   G  P+  T+  L+ G  K  R    L  FR M +K +K
Sbjct: 440 DGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIK 499

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P    +  ++           A ++L EM
Sbjct: 500 PTTVTYNIILDGLFRAGRTVAAQKMLHEM 528



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 187/425 (44%), Gaps = 23/425 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G L+    + G   +    F+ +K +G+ V N   +  L++A  K   +D   + L EMQ
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGI-VANCLVFTILIDAYAKRGMMDEAMLILSEMQ 318

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVD 152
             G   D +T + L+   C  G+   A+  FN++I  G   +  V+  L+  F   G++ 
Sbjct: 319 GQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLV 378

Query: 153 KACELI-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           KA EL+ E M++   R N   F  ++H   K+ RV  A  +FD +   G  SD  M++ +
Sbjct: 379 KAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTL 438

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRD 268
           I G C   ++  A  +   M  +GI PD    + L+      G +     L +E+  D+ 
Sbjct: 439 IDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM-SDKK 497

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +   T+  N I+  L   G    A  +L  MI                  TVS  T  ++
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT--------------TVSLPT--YN 541

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           II+  L ++   D A+ +F+++  +    N+   N +I+ +    R EE+ +L   + +S
Sbjct: 542 IILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDS 601

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T   M R L +   V  A N+   M   G  P  +     I+ L + G+ ++A
Sbjct: 602 GLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661

Query: 449 FRFLT 453
             +++
Sbjct: 662 GNYMS 666



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI- 590
           P++ TY +++NG C++   +  +    R+L +     D     T++  LC   R DDA+ 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLL-RTGLKADKTAANTVLKCLCCTKRTDDAVK 64

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM-KEKGM-KPDMFVFVALIS 648
           +L   M E GC P+  ++  ++  LC  +R + AL   RMM KE+G+  PD+  +  +I 
Sbjct: 65  VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124

Query: 649 AFLSELNPPLAFEVLKEM 666
            F  E     A  +  EM
Sbjct: 125 GFFKEGKIGKACNLYHEM 142


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 227/469 (48%), Gaps = 25/469 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD A+  F++M           ++ I+    K K    A+ L   ++  GI PD   L+ 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 246 LITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G++T    +L K +      +T+TL  N++++ L   G + +A +    ++ 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTL--NTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  G ++          N  S+  +IN + K G    A+ L +++       NV +
Sbjct: 158 ------QGFQL----------NQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVM 201

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +ID LC    + E+Y L  EM   G      T +++    C    +  A+ L+ +M 
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P V    +L+  LCK GK  EA   L  M++    PD++ YS  + G   +  V 
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  +F  +   G  PDV  Y I+I+G CK + V EA +LF EM  K ++P + TY+ LI
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G CKSG I      +  M ++  G P +VITY++LIDGLC  G  D AI L+N+M+++G
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDR--GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             PN  TF  L+ GLCK  R + A   F+ +  KG   +++ +  +I  
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 233/506 (46%), Gaps = 22/506 (4%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        + F+ +L +F+K      A  L  R++   I+ +  T  +L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F    ++     +  K+ K G+  D    + +I GLC   Q++ AL  + ++   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 237 TPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             +      LI      G+    +K  +  + R      ++ ++I+  L     + +AY 
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 295 LLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           L   M +KG                 +S +  ++  +I     +GKL  A+ L  EM   
Sbjct: 221 LFSEMTVKG-----------------ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
               NV+ YN L+D LC   +++E+  +L  M ++  KP   T +++        +V  A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            ++   M + G  P V   T+LI   CK+    EA     +M Q+  +P IV YS+ I G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L    R+    +L  ++   G   +V+ Y+ +I GLCK   +  A  LFN+M  +G+ P+
Sbjct: 384 LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             T+ +L++G CK G +  A      +L K     +V TY  +IDG C  G  ++A+ + 
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMIDGHCKQGLLEEALTML 502

Query: 594 NEMEEKGCAPNRITFMALITGLCKCD 619
           ++ME+ GC P+ +TF  +I  L K D
Sbjct: 503 SKMEDNGCIPDAVTFEIIIIALFKKD 528



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 3/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F+ I+++  K      A+SL   +   G   ++   N LI+  C+  ++   + 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKEL 439
           +L ++ + G+ P   TLN++ + LC +  V  AL+   K+  QG +   V + TL I  +
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTL-INGV 174

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G    A + L  +      P++V YS  I  L   + V  A  LF ++   G   DV
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+ +I G C   ++ EA  L NEM+ K + P+V TYN+L++  CK G + +A   L+ 
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ML K    PDVITY+TL+DG  +      A  ++N M   G  P+  T+  LI G CK  
Sbjct: 295 ML-KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               AL  F+ M +K M P +  + +LI         P  ++++ EM
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 220/476 (46%), Gaps = 32/476 (6%)

Query: 63  VPNNYSYNCLLEALCK----SCSVDLVE-MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            P    +N +L++  K    S +V L   + LK +Q      D  TL  L+  +C+ GQ 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP-----DLITLNILINCFCHMGQI 110

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
               SV  +I+  G+  + V  + L+      G+V KA    +++     +LN+ ++  L
Sbjct: 111 TFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTL 170

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+G  K      A++L  K+       +  MY  II  LCK + +  A  L+SEM   GI
Sbjct: 171 INGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 230

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           + D    S LI     EG+L   +  + E   + +N      N ++  L   G + +A +
Sbjct: 231 SADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 295 LLQAMIKGEPIADV-GVEMLM--------------IFKG----TVSPNTSSFDIIINTLL 335
           +L  M+K     DV     LM              +F       V+P+  ++ I+IN   
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+  +D AL+LF+EM Q   +  +  Y++LIDGLC S R+   ++L+ EM + G      
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI 410

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +S+   LC+   +  A+ L  KM+ QG  P     T+L+  LCK G+  +A     D+
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           + +G+  ++  Y+  I G      ++ AL +   +  +GC PD V + III  L K
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 3/241 (1%)

Query: 381  LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            L   +E  G +P  FTLN +  C C    +    +++ K+  +G+ P     T LI  LC
Sbjct: 948  LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007

Query: 441  KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
              G+  +A  F   ++ +GF  + V Y   I G+  I     A++L R I      PDVV
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067

Query: 501  AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             YN II  LCK Q V++A  LF EM  KG+   V TYN LI G+C  G + +A+  L++M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 561  LEKESGSPDVITYTTLIDGLCIAGRP--DDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            + K + +P+V TY  L+D LC  G+   D+++ + ++ME+ GC  N +TF  +I+ L + 
Sbjct: 1128 VLK-TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEK 1186

Query: 619  D 619
            D
Sbjct: 1187 D 1187



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 181/392 (46%), Gaps = 20/392 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  +  +G    A  L  ++    L  PN   Y+ +++ALCK   V        E
Sbjct: 166 SYGTLINGVCKIGDTRAAIKLLQKIDGR-LTKPNVVMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M   G   D  T + L+  +C  G+  +A+ + NE++      + + ++IL+ A  K G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A  ++  M    ++ +  T+  L+ G+     V KA  +F+ M+  G   D   Y +
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           +I G CKNK ++ AL L+ EM    + P     S LI      G +  +   I E  DR 
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                +  +S++  L  NG +D+A  L   M       D G+           PNT +F 
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKM------KDQGIR----------PNTFTFT 448

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+++ L K G+L  A  +F+++   G   NV+ YN +IDG C    LEE+  +L +ME++
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDN 508

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           G  P   T   +   L ++ +  G +   +K+
Sbjct: 509 GCIPDAVTFEIIIIALFKKDENGGNVGFDKKV 540



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 413  ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
            A++L  ++ ++G +P +    +LI   C  G+    F  L  +++ G+ PD + ++  I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 473  GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            GL    +V+ AL     + A G   + V+Y  +I+G+CK      A  L  ++  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 533  SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
             V  YN +I+  CK   + +A      M  K   S DV+TY TLI G CI G+  +AI L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVK-GISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 593  WNEMEEKGCAPNRITFMALITGLCK--CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             N+M  K   PN  T+  L+  LCK   D    +L     M++ G K +   F  +ISA 
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 651  LSELNPPLAFEVLKEM 666
              +       ++L EM
Sbjct: 1184 FEKDENDKVEKLLHEM 1199



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 1/190 (0%)

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I+ VD A+  F  +      P ++ +N I+    K +  + A  L + +  KG+ P + T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+LIN +C  G I      L+++L K    PD +T  TLI GLC+ G+   A+   +++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKIL-KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             +G   N++++  LI G+CK    RAA+   + +  +  KP++ ++  +I A       
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLV 215

Query: 657 PLAFEVLKEM 666
             A+ +  EM
Sbjct: 216 SEAYGLFSEM 225



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 2/219 (0%)

Query: 315  IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
            I K    P+T +F  +IN L   G+++ AL    ++   G   N   Y  LI+G+C    
Sbjct: 987  ILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGD 1046

Query: 375  LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
               + +LLR+++    KP     N++   LC+ Q V  A  L  +M V+G    V     
Sbjct: 1047 TRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNT 1106

Query: 435  LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR--VDLALELFRDICA 492
            LI   C  GK  EA   L  MV +   P++  Y+  +  L    +  +D +L +   +  
Sbjct: 1107 LIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMED 1166

Query: 493  HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            +GC  + V + IIIS L +     + E L +EMI +GL+
Sbjct: 1167 NGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 114/246 (46%), Gaps = 2/246 (0%)

Query: 320  VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            + P+  + +I+IN     G++    S+  ++ + G   +   +  LI+GLC   ++ ++ 
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
                ++   GF+    +  ++   +C+  D   A+ L+RK+  +  +P V     +I  L
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 440  CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            CKH    +A+    +M  +G   D+V Y+  I G   + ++  A+ L   +      P+V
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 500  VAYNIIISGLCKAQR--VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
              YNI++  LCK  +  + E+  + ++M   G   +  T+ ++I+   +    D+    L
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 558  SRMLEK 563
              M+ +
Sbjct: 1197 HEMIAR 1202



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 52/294 (17%)

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI 158
            D +TL  L+  +C+ GQ     S+  +I+  G+  D   F+ L+      G+V+KA    
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 159  ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            +++     +LN+ ++  LI+G  K      A++L  K+       D  MY+ II  LCK+
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 219  KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
            + +  A  L+ EM   GI+ D                                  +  N+
Sbjct: 1080 QLVSKAYGLFFEMNVKGISAD---------------------------------VVTYNT 1106

Query: 279  IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
            ++      G + +A  LL  M+                  T++PN  +++I+++ L K+G
Sbjct: 1107 LIYGFCIVGKLKEAIGLLNKMV----------------LKTINPNVRTYNILVDALCKEG 1150

Query: 339  K--LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            K  LD +LS+  +M   GC  N   +  +I  L   +  ++  +LL EM   G 
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 1/174 (0%)

Query: 477  IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            +K    A+ L   +   G  PD+   NI+I+  C   ++     +  +++ +G  P   T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 537  YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            +  LING C  G +++A+    ++L  +    + ++Y TLI+G+C  G    AI L  ++
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLA-QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI 1057

Query: 597  EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            + +   P+ + +  +I  LCK      A   F  M  KG+  D+  +  LI  F
Sbjct: 1058 DGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGF 1111



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 9/244 (3%)

Query: 64   PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
            P+ ++ N L+   C    +      L ++   G+  D  T T L+   C  GQ +KAL  
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 124  FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++++  G+ +++  +  L+    K G+   A +L+ ++D    + +   +  +I    K
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078

Query: 183  KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
               V KA  LF +M   G ++D   Y+ +I G C   +L+ A+ L ++M    I P+   
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138

Query: 243  LSKLITSCSDEGE------LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
             + L+ +   EG+      L++L K   ED       +    I+  L      D+   LL
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSK--MEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 297  QAMI 300
              MI
Sbjct: 1197 HEMI 1200



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 32   ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            + G LI  +  +G    A  L  ++    L  P+   YN +++ALCK   V        E
Sbjct: 1033 SYGTLINGVCKIGDTRAAIKLLRKIDGR-LTKPDVVMYNTIIDALCKHQLVSKAYGLFFE 1091

Query: 92   MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWG 149
            M   G   D  T   L+  +C  G+  +A+ + N+++    ++ +V  ++IL+ A  K G
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK-TINPNVRTYNILVDALCKEG 1150

Query: 150  E--VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
            +  +D++  ++ +M+D   + N  TF ++I    +K   DK  +L  +M   G 
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 272/610 (44%), Gaps = 77/610 (12%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S  A   L+    S G   +A   F ++  E    P  + YN +L+AL  S  + L    
Sbjct: 136 SSSAFAALVAAHSSAGRNADAVQAFSRMD-EFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
              M   G   ++ T   L+   C  G    AL +F+E++D G + +  ++++LL +   
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++D+A +L+  M D     +E T+   + G  K  RV++A Q    +   GFA     
Sbjct: 255 AGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG 314

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWE 265
           Y  +I GL + ++ +     Y  M    I+PD  + + +I  C++ G +   L   ++ +
Sbjct: 315 YSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMK 374

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +     T   N+++++L  +G +++A+ L   M++   + D   + +MI          
Sbjct: 375 KKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICG-------- 426

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
                   L K G +D A+ +F EM + GC   V  YN LIDG     RLEE+  L  +M
Sbjct: 427 --------LCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G  P      S+F  L    + V     +RK               L+ ++C+ G+ 
Sbjct: 479 -EMGNNP------SLFLRLTLGANQVCDSESLRK---------------LVHDMCQSGQV 516

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           ++A++ L  ++  G +PD+V Y+  I GL   + +D A+ LF+++   G  PD + Y  +
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-LCLSRMLEK- 563
           I GL +A R  +A  LF  ++  G  PS++ YN ++   C+   + QA+ L L  + +K 
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKY 636

Query: 564 ----------------ESGSPD-----------------VITYTTLIDGLCIAGRPDDAI 590
                           E GS D                    YT  + GLC   R DDA+
Sbjct: 637 NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDAL 696

Query: 591 MLWNEMEEKG 600
            +++ ++E G
Sbjct: 697 RIFHTLQEFG 706



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 237/497 (47%), Gaps = 34/497 (6%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+ A S  G    A +   RMD+   R     +  ++   V    +  AL L+++M
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A + A Y+V++ GLCK      AL+++ EM   GI P+ +I + L++S  + G++
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 257 TLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              V+ +   +D   +   +  N+ +  L   G +++A+                  ++M
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQ----------------RLVM 302

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +  G  +     +  +I+ L +  + D     ++ M +     +V LY  +I G   + R
Sbjct: 303 LQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGR 362

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E++   L  M++ GF P  F  N++ + LC   D+  A  L  +M            T+
Sbjct: 363 IEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTI 422

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD----- 489
           +I  LCK G   EA +   +M + G  P ++ Y+A I G     R++ A  LF       
Sbjct: 423 MICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482

Query: 490 ---------ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
                    + A+  C D  +   ++  +C++ +V +A  L   +I  G++P V TYN L
Sbjct: 483 NPSLFLRLTLGANQVC-DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTL 541

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ING CK+ N+D A+  L + L+ +  SPD ITY TLIDGL  A R +DA+ML+  + + G
Sbjct: 542 INGLCKARNLDGAVR-LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600

Query: 601 CAPNRITFMALITGLCK 617
            +P+   + +++  LC+
Sbjct: 601 SSPSLSIYNSMMRSLCR 617



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 219/506 (43%), Gaps = 100/506 (19%)

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMRILVSN 286
           ++ + +G+       + L+ + S  G     V+     ++        + N+I++ LV +
Sbjct: 126 ADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDS 185

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I  A  L   M+                    +PN ++++++++ L K G    AL +
Sbjct: 186 GVILLALALYNRMVAA----------------GCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM   G M NV +Y  L+  LCN+ +++E+ +LL  M++ G  P   T N+    LC+
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 407 -------------RQDVVGALNL----------------------VRKMRVQGHEPWVKH 431
                         QD   AL L                       + M  +   P V  
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T++I+   + G+  +A  FL  M ++GF+PD  CY+  +  L D   ++ A  L  ++ 
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +    D     I+I GLCK   V EA  +F+EM   G  P+V TYN LI+G+ + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 552 QA------------------------MLCLSRMLEK------ESGS-------------- 567
           +A                         +C S  L K      +SG               
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 568 ---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PDV+TY TLI+GLC A   D A+ L+ E++ KG +P+ IT+  LI GL +  R   A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
           ++ F+ + + G  P + ++ +++ + 
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 190/434 (43%), Gaps = 51/434 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR     G +E+A    D +K++G  VP+ + YN +L+ LC    ++       EM   
Sbjct: 353 MIRGCAEAGRIEDALSFLDVMKKKGF-VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN 411

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
               D  T T ++   C  G  D+A+ +F+E+ +HG  D  V  ++ L+  F + G +++
Sbjct: 412 NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEE 470

Query: 154 ACELIERMDDCN-----IRL--------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           A  L  +M+  N     +RL        + ++   L+H   +  +V KA +L   +  SG
Sbjct: 471 ARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG 530

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELT 257
              D   Y+ +I GLCK + L+ A++L+ E++  GI+PD      LI        E +  
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL--------LQAMIKGEPIA--- 306
           +L + I +     ++++  NS+MR L     + QA NL            ++ E +A   
Sbjct: 591 MLFQNILQSGSSPSLSIY-NSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 307 --------DVGVEMLMIFK---GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                   D GV  L+      G +S N   + I +  L +  + D AL +F  + + G 
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSN--PYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQDVVG 412
                    LI+ LC    L  + +++          +    N + R LC   RRQD   
Sbjct: 708 DITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQD--- 764

Query: 413 ALNLVRKMRVQGHE 426
           A  L  +M + G++
Sbjct: 765 AQALAWRMHLVGYD 778


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 160/631 (25%), Positives = 277/631 (43%), Gaps = 82/631 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  Y YN LLE+  +   V+ V    K+M   G   + YT   L++  C+S         
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSC------- 162

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                                      VD A EL + M +   + NE TF +L+ G+ K 
Sbjct: 163 ---------------------------VDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
              DK L+L + M   G   +  +Y+ I+   C+  + + + +L  +M+  G+ PD    
Sbjct: 196 GLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTF 255

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTM-------TLLCNSIMRILVSNGSIDQAYNLL 296
           +  I++   EG++ L    I+ D +++         ++  N +++     G ++ A  L 
Sbjct: 256 NSRISALCKEGKV-LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +++ + + +  +                 S++I +  L++ GK   A ++ ++M   G  
Sbjct: 315 ESIRENDDLVSL----------------QSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +++ YN L+DGLC    L ++  ++  M+ +G  P   T   +    C    V  A +L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +++M      P      +L+  L   G+  EA   L  M ++G+  D V  +  + GL  
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 477 IKRVDLALELFRDICAHG-----------------------CCPDVVAYNIIISGLCKAQ 513
              +D A+E+ + +  HG                       C PD++ Y+ +++GLCKA 
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R AEA+ LF EM+ + L P    YN+ I+ +CK G I  A   L  M EK+     + TY
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETY 597

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            +LI GL I  +  +   L +EM EKG +PN  T+   I  LC+  +   A      M +
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQ 657

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           K + P++F F  LI AF    +  +A EV +
Sbjct: 658 KNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE 688



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 5/351 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP T +F+++I  L     +D A  LF EM + GC  N F +  L+ G C +   ++  
Sbjct: 143 ISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ELL  ME  G  P     N++    CR      +  LV KMR +G  P +      I  L
Sbjct: 203 ELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISAL 262

Query: 440 CKHGKAMEAFRFLTDMVQEGFL----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           CK GK ++A R  +DM  + +L    P+ + Y+  + G   +  ++ A  LF  I  +  
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              + +YNI + GL +  +  EAE +  +MI KG+ PS+ +YN+L++G CK G +  A  
Sbjct: 323 LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            +  ++++   SPD +TY  L+ G C  G+ D A  L  EM    C PN  T   L+  L
Sbjct: 383 IVG-LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               R   A    R M EKG   D      ++           A E++K M
Sbjct: 442 WNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 162/684 (23%), Positives = 287/684 (41%), Gaps = 69/684 (10%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           R RR+  +  L +D+V   C +SP    F  LIR L     V+ A  LFD++  +G C P
Sbjct: 124 RERRVEFVSWLYKDMV--LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKP 180

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N +++  L+   CK+   D     L  M+ +G   +K     ++  +C  G+ D +  + 
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLV 240

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI----RLNEKTFCVLIHG 179
            ++ + G V + V F+  + A  K G+V  A  +   M+        R N  T+ +++ G
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K   ++ A  LF+ + ++        Y++ + GL ++ +   A  +  +M   GI P 
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPS 360

Query: 240 FEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
               + L+         SD   +  L+K      D  T   L +    +    G +D A 
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV----GKVDAAK 416

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +LLQ M++   +                PN  + +I++++L   G++  A  L R+M + 
Sbjct: 417 SLLQEMMRNNCL----------------PNAYTCNILLHSLWNMGRISEAEELLRKMNEK 460

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK---------------------- 391
           G   +    N ++DGLC S  L+++ E+++ M   G                        
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520

Query: 392 -PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T +++   LC+      A  L  +M  +  +P      + I   CK GK   AFR
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L DM ++G    +  Y++ I GL    ++     L  ++   G  P++  YN  I  LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML----EKESG 566
           +  +V +A +L +EM+ K + P+V ++  LI  +CK  + D A       +    +KE  
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG- 699

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
                 Y+ + + L  AG+   A  L   + ++G       +  L+  LCK D    A  
Sbjct: 700 -----LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASG 754

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
               M +KG   D    + +I   
Sbjct: 755 ILHKMIDKGYGFDPAALMPVIDGL 778



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 213/552 (38%), Gaps = 116/552 (21%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAA---MYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           F K + +DKA   F +  +S F  +     +Y+V++    + +++E    LY +M   GI
Sbjct: 85  FAKSNHIDKAFPQF-QFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGI 143

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +P+                                 T   N ++R L  +  +D A  L 
Sbjct: 144 SPE---------------------------------TYTFNLLIRALCDSSCVDAARELF 170

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M +               KG   PN  +F I++    K G  D  L L   M   G +
Sbjct: 171 DEMPE---------------KG-CKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVL 214

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N  +YN ++   C   R ++S +L+ +M E G  P   T NS    LC+   V+ A  +
Sbjct: 215 PNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 417 VRKMRVQGHEPWVKHNT----LLIKELCK------------------------------- 441
              M +  +    + N+    L++K  CK                               
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQ 334

Query: 442 ----HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
               HGK +EA   L  M+ +G  P I  Y+  + GL  +  +  A  +   +  +G  P
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSP 394

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D V Y  ++ G C   +V  A+ L  EM+    +P+  T N+L++     G I +A   L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME-------------------- 597
            +M EK  G  D +T   ++DGLC +G  D AI +   M                     
Sbjct: 455 RKMNEKGYGL-DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 598 ---EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
              E  C P+ IT+  L+ GLCK  R   A   F  M  + ++PD   +   I  F  + 
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQG 573

Query: 655 NPPLAFEVLKEM 666
               AF VLK+M
Sbjct: 574 KISSAFRVLKDM 585



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 233/539 (43%), Gaps = 43/539 (7%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++    VGL+E+A  LF+ + RE   + +  SYN  L+ L +       E  LK+M D
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESI-RENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMID 354

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G G   Y+   L+   C  G    A ++   +  +G   + V +  LL  +   G+VD 
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDA 414

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M   N   N  T  +L+H      R+ +A +L  KM + G+  D    ++I+ 
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC + +L+ A+++   M+  G      + +  I    D                    +
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD--------------------S 514

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           L+ N+ +  L++  +      LL  + K    A+       +    + P++ +++I I+ 
Sbjct: 515 LIENNCLPDLITYST------LLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHH 568

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K GK+  A  + ++M + GC +++  YN+LI GL   N++ E + L+ EM E G  P 
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPN 628

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N+  + LC    V  A NL+ +M  +   P V     LI   CK    +  F    
Sbjct: 629 ICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK----VPDF---- 680

Query: 454 DMVQEGFLPDI-VC------YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           DM QE F   + +C      YS     L+   ++  A EL   +   G       Y  ++
Sbjct: 681 DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLV 740

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
             LCK   +  A  + ++MI KG     A    +I+G  K GN  +A     +M+E  S
Sbjct: 741 VSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMAS 799


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 164/660 (24%), Positives = 294/660 (44%), Gaps = 65/660 (9%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY---NCLLEALCKSCSVDLVEMRLK 90
           GFLI      G+ +++  +F  V  +G+ V  N  Y     L+++ C    VD       
Sbjct: 171 GFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCS 230

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWG 149
            M++  +   ++ +   +    N G+ +  L     ++  G+ +D    + +L       
Sbjct: 231 AMREQPFSVYEFVMNRFM----NKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++  A +    +     + N  TF  LI  + K+  +DKA  LFD M  +G   D  +Y 
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---D 266
           ++I GL K  +LE   +L       GI  D    S  + +    G+L  ++ +I++   +
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVI-QIYKRMLN 405

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             ++   + C+ +++    NG I +A  L   ++K      +G E          P+  +
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILK------LGFE----------PSILT 449

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I    K G L     L+ +M +  C  +  +Y+ LI+GLC    + ++     +  
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAV 509

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P  FTLN++    CR + +VGA+ +   M +   +      T+LIK   + G+  
Sbjct: 510 NRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVD 569

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA      M+++ F PD++ Y   I GL  +K+    L +F  +C +   PD+  YN++I
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLI 629

Query: 507 S------------GL-----------------------CKAQRVAEAEDLFNEMITKGLI 531
           +            GL                       C  +R+ +A  LF +M ++ L 
Sbjct: 630 NMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLR 689

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA-GRPDDAI 590
           P+  T+ +LI+ +C+ G +D AML  S+MLE E   P+++TY+ LI G   +    +  +
Sbjct: 690 PNAITFTILIDAFCREGRMDDAMLMFSKMLE-EGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L+NEM E   APN +++  LI GLCK    + A   FR   +K + PD+  +  LI  +
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 252/551 (45%), Gaps = 41/551 (7%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           +   LL V   +  F +A  VF++ I     D       L AF      D  C+L    D
Sbjct: 116 SFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDT----LDAFR-----DGFCDL----D 162

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQL 221
             N   +   +  LI  + +K   DK++ +F  +   G F S   +Y +++G L  +  +
Sbjct: 163 STN---HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY-LLLGSLIDSHCV 218

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSI 279
           E+ +  Y E+  +     F +   ++    ++GE  + L   +           + CN I
Sbjct: 219 EVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKI 278

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           ++ +     I  A +    +++  P                 PN  +F  +I+   K+G 
Sbjct: 279 LKGIWMQNDIGVADDYFNMVVRIGP----------------KPNVVTFSTLIDAYCKEGN 322

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD A  LF  M   G   ++ +Y+ LIDGL  + RLE+   LL    + G K      +S
Sbjct: 323 LDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSS 382

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                 +  D+   + + ++M  +G  P V   ++LIK  C++G+ +EA      +++ G
Sbjct: 383 AMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLG 442

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F P I+ YSA I G      +     L+ D+    C PD + Y+++I+GLCK   V +A 
Sbjct: 443 FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDAL 502

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM--LCLSRMLEKESGSPDVITYTTLI 577
             F + + +GL P+V T N L++ +C+   I  AM    L  ML  ++   D +TYT LI
Sbjct: 503 RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA---DTVTYTILI 559

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            G    GR D+A+ML+ +M +K   P+ IT+  LI GLCK  +  A L  F  M +  + 
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA 619

Query: 638 PDMFVFVALIS 648
           PD+ ++  LI+
Sbjct: 620 PDIAIYNVLIN 630



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 246/555 (44%), Gaps = 30/555 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACE--LIERMDD 163
           L++ YC  G FDK++ +F  +   G +V  +V  +LL +      +D  C   ++++  +
Sbjct: 173 LIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSL-----IDSHCVEVIVDKYGE 227

Query: 164 CNIRLNEKTFCV---LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
               + E+ F V   +++ F+ K  V+  L+    + + GF  D    + I+ G+     
Sbjct: 228 LCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQND 287

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           + +A   ++ +   G  P+    S LI +   EG L    ++ ++     V    ++ + 
Sbjct: 288 IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSI 347

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++  L   G ++    LL   +      D G+++          +   F   ++  +K G
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVAL------DKGIKL----------DVVGFSSAMDAYVKIG 391

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L   + +++ M   G   NV   + LI G C + R+ E+  L  ++ + GF+P+  T +
Sbjct: 392 DLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYS 451

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++    C+  ++     L   M  +  EP     ++LI  LCK G   +A RF    V  
Sbjct: 452 ALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNR 511

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P++   +  +     +K +  A++++  +       D V Y I+I G  +  RV EA
Sbjct: 512 GLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEA 571

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LF +M+ K   P V TY  LI+G CK      A LC+   + K + +PD+  Y  LI+
Sbjct: 572 LMLFFQMLKKDFKPDVITYCTLIDGLCKLKK-SSAGLCIFDFMCKNAVAPDIAIYNVLIN 630

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                G  + A+ L+  + E+G  P+  TF  +I   C   R   A+  F  M  + ++P
Sbjct: 631 MHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRP 690

Query: 639 DMFVFVALISAFLSE 653
           +   F  LI AF  E
Sbjct: 691 NAITFTILIDAFCRE 705



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 4/367 (1%)

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLA 343
           +N S+   + +     KG     V + M +  KG  VSPN     +++ +L+    +++ 
Sbjct: 164 TNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY--LLLGSLIDSHCVEVI 221

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           +  + E+      Q   +Y  +++   N   +E      + + + GF     T N + + 
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           +  + D+  A +    +   G +P V   + LI   CK G   +AF     M   G  PD
Sbjct: 282 IWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           ++ YS  I GL    R++    L       G   DVV ++  +    K   +     ++ 
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+ +G+ P+V + ++LI G+C++G I +A     ++L K    P ++TY+ LI G C +
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQIL-KLGFEPSILTYSALIAGFCKS 460

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G   D   L+ +M +K C P+ I +  LI GLCK      AL  F     +G+ P++F  
Sbjct: 461 GNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTL 520

Query: 644 VALISAF 650
             L+ +F
Sbjct: 521 NTLLDSF 527



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 179/449 (39%), Gaps = 87/449 (19%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +D++K RC         LI  L   GLV +A   F Q    GL  PN ++ N LL++ 
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLS-PNVFTLNTLLDSF 527

Query: 77  CK-SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           C+  C V  +++              Y L  +L +        KA             D 
Sbjct: 528 CRLKCIVGAMKV--------------YYLMGMLNI--------KA-------------DT 552

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++IL+   +++G VD+A  L  +M   + + +  T+C LI G  K  +    L +FD 
Sbjct: 553 VTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDF 612

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K+  A D A+Y+V+I    +   LE AL L+  +   G  PD    + +I        
Sbjct: 613 MCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICC------ 666

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                               CN           +D A  L   M   +            
Sbjct: 667 -------------------YCNF--------KRLDDAVQLFAKMTSEQ------------ 687

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
               + PN  +F I+I+   ++G++D A+ +F +M + G   N+  Y+ LI G   S  +
Sbjct: 688 ----LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM 743

Query: 376 EES-YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            ES  +L  EM E+   P   + + +   LC+R  +  A    R    +   P V   T+
Sbjct: 744 MESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTI 803

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LI+  CK G+  EA     +M+     PD
Sbjct: 804 LIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 9/310 (2%)

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGF----KPTHFTLNSMFRCLCRRQDVVGALNL 416
           +Y  LI+  C     ++S ++   +   G        +  L S+    C    V     L
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGEL 228

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              MR Q    +      ++      G+     RF   +VQ GF  DI+  +  + G+  
Sbjct: 229 CSAMREQPFSVY----EFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              + +A + F  +   G  P+VV ++ +I   CK   + +A  LF+ M   G+ P +  
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++LI+G  K+G ++     L   L+K     DV+ +++ +D     G     I ++  M
Sbjct: 345 YSILIDGLFKAGRLEDGQRLLLVALDK-GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             +G +PN ++   LI G C+  R   A   F  + + G +P +  + ALI+ F    N 
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463

Query: 657 PLAFEVLKEM 666
              F + ++M
Sbjct: 464 RDGFYLYEDM 473


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 282/613 (46%), Gaps = 31/613 (5%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLK 90
           L++CL      EEA N+L  ++   G CVPN +SY+ +L+ LC +     ++DL +M  K
Sbjct: 198 LLKCLCYANRTEEAVNVLLHRMSELG-CVPNVFSYSIILKGLCDNSMSQRALDLFQMMAK 256

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           E          Y    ++  +   G+  KA S+F+E+   G   + V +++++ A  K  
Sbjct: 257 EGGACSPNVVAYN--TVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +DKA  ++ +M     + +  T+  +IHG+    R+ +A ++F KM   G   +  + +
Sbjct: 315 AMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICN 374

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             +  LCK+ + + A +++  M   G  PD      L+   + EG    ++  ++     
Sbjct: 375 SFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG-LFNSMKS 433

Query: 270 NTMTLLC---NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           N +   C   N ++      G +D A  +   M +               +G VSP+  +
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQ---------------QG-VSPDVVT 477

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   + G+L  A+  F +M   G   N  +Y+++I G C    L ++ EL+ EM 
Sbjct: 478 YSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537

Query: 387 ESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             G  +P     NS+   LC+   V+ A ++   +   G  P V   T LI   C  GK 
Sbjct: 538 NKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKM 597

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +AF+ L  M   G   DIV YS  + G     R++  L LFR++   G  P+ V Y I+
Sbjct: 598 DKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ++GL +A R   A   F+EMI  G   +V+ Y +++ G C++   D+A++   + L   +
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK-LGTMN 716

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
               +    T+I+ +    R ++A  L+  +   G  PN  T+  +I  L K      A 
Sbjct: 717 VKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDAN 776

Query: 626 VHFRMMKEKGMKP 638
             F  M++ G+ P
Sbjct: 777 NMFSSMEKSGIVP 789



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 198/458 (43%), Gaps = 84/458 (18%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I++ L  N    +A +L Q M K                G  SPN  +++ +I+   K+G
Sbjct: 234 ILKGLCDNSMSQRALDLFQMMAKE--------------GGACSPNVVAYNTVIHGFFKEG 279

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +   A SLF EMT+ G   +V  YN +ID LC +  ++++  +LR+M  +G +P   T N
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M         +  A  + RKM+ +G  P +      +  LCKHG++ EA      M  +
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 459 GFLPDIVCYSAAIGGLID---------------------------------IKR--VDLA 483
           G  PDIV Y   + G                                     KR  VD A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           + +F ++   G  PDVV Y+ +IS   +  R+ +A + FN+M+ +G+ P+ A Y+ +I G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 544 WCKSGNIDQAMLCLSRMLEK------------------ESG-----------------SP 568
           +C  G + +A   +S M+ K                  + G                  P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           DVIT+T+LIDG C+ G+ D A  + + ME  G   + +T+  L+ G  K  R    L  F
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M+ KG+KP+   +  +++          A +   EM
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 161/323 (49%), Gaps = 3/323 (0%)

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF--KPTHFTLNSMFRC 403
           L   M+++GC+ NVF Y+ ++ GLC+++  + + +L + M + G    P     N++   
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +  +   A +L  +M  QG +P V    L+I  LCK     +A   L  M   G  PD
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            V Y+  I G   + R+  A ++FR + + G  P++V  N  ++ LCK  R  EA ++F+
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M  KG  P + +Y  L++G+   G     M+ L   ++    + D   +  LI      
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFAD-MIGLFNSMKSNGIAADCRVFNILIHAYAKR 453

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  DDA++++ EM+++G +P+ +T+  +I+   +  R   A+  F  M  +G++P+  V+
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            ++I  F        A E++ EM
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEM 536



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 199/488 (40%), Gaps = 79/488 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I    ++G ++EA  +F ++K  GL +PN    N  L +LCK             M   
Sbjct: 341 MIHGYATLGRLKEAAKMFRKMKSRGL-IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAK 399

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   D  +   LL  Y + G F   + +FN +  +G   D  VF+IL+ A++K G VD A
Sbjct: 400 GHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDA 459

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +   M    +  +  T+  +I  F +  R+  A++ F++M   G   + A+Y  II G
Sbjct: 460 MLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQG 519

Query: 215 LCKNKQLEMALQLYSEMKGSGIT-PDFEILSKLITSCSDEG------ELTLLVKEIWEDR 267
            C +  L  A +L SEM   GI  PD    + +I S   +G      ++  LV +I E  
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-------- 319
           DV T T L +    +    G +D+A+ +L AM        VGVE  ++   T        
Sbjct: 580 DVITFTSLIDGYCLV----GKMDKAFKILDAM------EVVGVETDIVTYSTLLDGYFKN 629

Query: 320 -----------------VSPNTSSFDIIINTLLKDGKL---------------------- 340
                            V PNT ++ I++  L + G+                       
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 341 -------------DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
                        D A+ LF+++  +    ++ + N +I+ +    R EE+ EL   +  
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           SG  P   T   M   L +   V  A N+   M   G  P  +    +I+ L + G+  +
Sbjct: 750 SGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAK 809

Query: 448 AFRFLTDM 455
           A  +L+ +
Sbjct: 810 AGNYLSKV 817



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 28/376 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G+V++A ++F +++++G+  P+  +Y+ ++ A  +   +     +  +M   
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVS-PDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G   +      ++Q +C  G   KA  + +E+I+ G     +  F+ ++ +  K G V  
Sbjct: 505 GIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMD 564

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A ++ + + D   R +  TF  LI G+    ++DKA ++ D M   G  +D   Y  ++ 
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G  KN ++   L L+ EM+  G+ P+      ++      G      K+  E   + + T
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM--IESGT 682

Query: 274 LLCNSIMRILVS----NGSIDQAYNLLQ-------------------AMIKGEPIADVGV 310
            +  SI  I++     N   D+A  L Q                   AM K +   +   
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
               I    + PN S++ ++I  LLKDG ++ A ++F  M + G +    L N +I  L 
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802

Query: 371 NSNRLEESYELLREME 386
               + ++   L +++
Sbjct: 803 EKGEIAKAGNYLSKVD 818



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 8/216 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + +   LF +++R+G+  PN  +Y  +L  L ++        +  EM + G       
Sbjct: 630 GRINDGLTLFREMQRKGV-KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH----VFSILLVAFSKWGEVDKACELIE 159
              +L   C +   D+A+ +F ++   G ++      + + ++ A  K    ++A EL  
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKL---GTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +    +  NE T+ V+I   +K   V+ A  +F  M KSG    + + + II  L +  
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           ++  A    S++ G  I  +    S +++  S +G+
Sbjct: 806 EIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 261/585 (44%), Gaps = 28/585 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+      ++ +A  +F Q +R GL + N  S N LL    ++   + +    +E++D 
Sbjct: 184 LIKVFAENNMLVDAADVFVQARRFGLEL-NILSCNFLLNCFAEANQTEFIRSLFEELKDS 242

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDK------ALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           G   + +T T ++  YC  G F K      A  V  E+  +G     V +   +    + 
Sbjct: 243 GPSPNVFTYTIMMNYYC-KGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G V+ A  LI  +   N  LN   +  +IH F +   + +A +L + M   G +  A  Y
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWED 266
            ++I GLCK  Q+E AL L  EM  S + P     S L       G  E++L +      
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                  +  N+++   V    +  A  L+              EM M   G+V PN+ +
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVH-------------EMRM--NGSV-PNSFT 465

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I+   K  +LD AL +F  M ++G   N+F  N + D         E+ +L+ E++
Sbjct: 466 FNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQ 525

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G  P  +T N + + LC+ Q    A  ++  M      P   H   LI    K     
Sbjct: 526 DLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPT 585

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A      M++ G  P IV Y+  I    +  ++  A  LF+++   G  PD + +  II
Sbjct: 586 KALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCII 645

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G CK   +  A  L+ EM   G  P+V TY  LI+G+ K   +D+A    ++M ++++ 
Sbjct: 646 AGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKM-KRDNV 704

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +PD +TYT LI G    G  D    ++NEM+E G  PN   +  L
Sbjct: 705 TPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 264/598 (44%), Gaps = 65/598 (10%)

Query: 115 GQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELI-ERMDDCNIRLNEKT 172
           G F   L+VF  +    W +  H      V+F  +     A ++I   +    +++  + 
Sbjct: 86  GLFPFVLTVFKTL---NWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQI 142

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM------YDVIIGGLCKNKQLEMALQ 226
           F   I  + K+  +D + +LF  +  S    DA M       +V+I    +N  L  A  
Sbjct: 143 FLRDIISYYKEVNLDVS-ELFSTLLDS--PQDAHMGGSIIVANVLIKVFAENNMLVDAAD 199

Query: 227 LYSEMKGSGITPDFEILS-KLITSCSDEGELTLLVKEIWED-RDVN-TMTLLCNSIMRIL 283
           ++ + +  G+  +  ILS   + +C  E   T  ++ ++E+ +D   +  +   +IM   
Sbjct: 200 VFVQARRFGL--ELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNY 257

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              GS  +  ++++A        +V  EM M      SP   ++   I+ L + G ++ A
Sbjct: 258 YCKGSFGKNIDIVKA-------TEVLEEMEM---NGESPTVVTYGAYIHGLCRAGCVEFA 307

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L L R++       N + YN +I   C +  L E++ELL +M   G  PT ++ + +   
Sbjct: 308 LRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDG 367

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC++  V  AL+L+ +M     +P +   + L   LCK G    +     ++  EG+  D
Sbjct: 368 LCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHD 427

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF- 522
           ++ Y+  I G +  + +  A +L  ++  +G  P+   +N +I G CK QR+ +A ++F 
Sbjct: 428 VISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFT 487

Query: 523 ----------------------------------NEMITKGLIPSVATYNLLINGWCKSG 548
                                             NE+   G++P+  TYN++I   CK  
Sbjct: 488 IMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQ 547

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
             ++A   L  ML K +  P  I Y TLIDG      P  A++L+ +M + G  P+ +T+
Sbjct: 548 KTEKAWEVLPVML-KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY 606

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LI       + + A   F+ M +KG+ PD  +F  +I+ F    +   A+ + +EM
Sbjct: 607 TMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 192/382 (50%), Gaps = 4/382 (1%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S+     L+  ++K   I D+      + +  + P   SF+I+IN L K GKL+ A  + 
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE---LLREMEESGFKPTHFTLNSMFRCL 404
            +M   G   NV  YN LIDG C   ++ + Y+   +L+EM   G  P   T N +    
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF 246

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ ++V  A+ +  +M  QG +P V     LI  LC +GK  EA      MV     P+I
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + ++A + G    K V  A ELF D+   G  P+V  YNI+I   CK + + +A  L+  
Sbjct: 307 ITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRI 366

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ KG+ P V+TYN LI G C+ G+++ A   +S M  K   + D+ITY  LID LC  G
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA-DLITYNILIDSLCNKG 425

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
               A+ L +EM  KG  P+++T+  +I G CK    RAAL     M++ G   ++  + 
Sbjct: 426 EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYN 485

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI  F  +     A  +L EM
Sbjct: 486 VLIKGFCKKDKLEDANGLLNEM 507



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 238/538 (44%), Gaps = 68/538 (12%)

Query: 105 TPLLQV--YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           TPLL    Y    Q    LSV     D    +  +  IL+ A++K        E  +R  
Sbjct: 64  TPLLSFINYSTQEQTQILLSVSG---DSFCANSIIVDILVWAYAKNLRTRLGFEAFKRAS 120

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D  ++L+  +   L+ G VK   +     ++ +M +         ++++I GLCK  +L 
Sbjct: 121 DYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  +  +MK  G++ +    + LI      G++  + K               ++I++ 
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK--------------ADAILKE 226

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           + ++G                                + PN  +F+I+I+   KD  +  
Sbjct: 227 MRADG--------------------------------ICPNEVTFNILIDGFCKDKNVSA 254

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ +F EM + G   NV  YN+LI+GLCN+ ++ E+  L  +M  S  KP   T N++  
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C+ + V  A  L   M  QG  P V    +LI   CK     +AF     M+ +G  P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+  Y+  I GL     ++ A  L  ++       D++ YNI+I  LC    + +A  L 
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +EM  KGL PS  TYN +I+G+CK GN+ +A L L   +EK     +V TY  LI G C 
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNL-RAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             + +DA  L NEM EKG  PNR+T+                +V   MM EKG  PD+
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTY---------------EIVTEEMM-EKGFVPDI 535



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 216/509 (42%), Gaps = 58/509 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
            +E   +   V  +  C  N+   + L+ A  K+    L     K   DYG      +  
Sbjct: 74  TQEQTQILLSVSGDSFCA-NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCN 132

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
           PL+      G+      V+ E+I        + F+I++    K G+++KA ++IE M   
Sbjct: 133 PLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVR 192

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDK---ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +  N  T+  LI G+ K  ++ K   A  +  +M   G   +   ++++I G CK+K +
Sbjct: 193 GVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNV 252

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A+++++EM   G+ P+    + LI    + G+    V E    RD      + NS ++
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK----VNEATALRD-----QMVNSCLK 303

Query: 282 --ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
             I+  N        LL    K + +   G     + K  ++PN ++++I+I+   KD  
Sbjct: 304 PNIITHNA-------LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDEN 356

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A +L+R M   G   +V  YN LI GLC    LE +  L+ EM+    K    T N 
Sbjct: 357 MEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNI 416

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC + ++  AL L+ +M  +G +P       +I   CK G    A    + M + G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            L ++  Y                                   N++I G CK  ++ +A 
Sbjct: 477 RLANVATY-----------------------------------NVLIKGFCKKDKLEDAN 501

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSG 548
            L NEM+ KGLIP+  TY ++     + G
Sbjct: 502 GLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 187/386 (48%), Gaps = 19/386 (4%)

Query: 264 WEDRDV--NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           W    V  N  TL  N ++ +L  +G  D  Y     M+                 G V 
Sbjct: 6   WAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAA---------------GCV- 49

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PNT ++  ++ +L +  + + A S+FR M   GC  NVF Y+ LI GLC   +++E+ EL
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM + G +P   T  S+   LC+   +  A++L  +M  +G  P      +LI    K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G   EA+R   +M+++G +P +  Y++ + G            LF+D+   GC P++  
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N ++ G CK   + EA  LF EM + G  P V +YN LI G C  G   +A   L  M+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
               G PD+++Y  LIDG   +G  D AI L+ E+ + G  P+  ++  +I  LC+  + 
Sbjct: 290 RSGVG-PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALI 647
            AA V F+ M   G  PD  V + L+
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLV 374



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 168/344 (48%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
            T S++ ++  L K G+ D     + +M   GC+ N + Y  L+  LC + R EE+  + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R M   G  P  F+ + +   LCR Q V  A  L+ +M   GH+P V     L+  LCK 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK  EA    + MV  G  PD V Y+  I G      +  A  LF ++   GC P V  Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N ++SG  +       + LF +M+ +G +P++ T+N L++G+CK G++ +A      M  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-R 254

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                PDV++Y TLI G+C  G+P +A  L  EM   G  P+ +++  LI G  K     
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+  F  + + G++PD F +  +I           AF V K+M
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 216/496 (43%), Gaps = 53/496 (10%)

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +HG +    ++ LL   +K G  D        M       N  T+  L+    +  R ++
Sbjct: 14  NHGTLS---YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  +F  M   G + +   Y ++I GLC+ ++++ A +L +EM   G  P          
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP---------- 120

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                N +T    S++  L   G + +A +L   M+        
Sbjct: 121 ---------------------NVVTY--GSLLSGLCKMGKLKEAVDLFSRMV-------- 149

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                  ++G   P+   ++++I+   K G +  A  LF EM + GC+  VF YN+L+ G
Sbjct: 150 -------YRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                       L ++M   G  P  FT N++    C+  D+V A  L  +MR  G  P 
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V     LI+ +C  GK  EA R L +M++ G  PDIV Y+  I G      +D A++LF 
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           +I   G  PD  +Y+ II  LC+A +V  A  +F +MI  G  P  A    L+ G C+  
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + ++      M++ E   P +  Y  L+  LC A R DD   +++E+ E+G +P+    
Sbjct: 382 RLTESCELFQAMVKFEC-VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440

Query: 609 MALITGLCKCDRPRAA 624
             ++  L + D   AA
Sbjct: 441 KVILETLRRSDDKDAA 456



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 217/487 (44%), Gaps = 50/487 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN LLE L KS   D V     +M   G   + YT   LL+  C + +F++A SVF  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G       +SIL+    +  +VD+A EL+  M D   + N  T+  L+ G  K  ++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            +A+ LF +M   G   D  +Y+V+I G  K   +  A +L+ EM   G  P     + L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           ++  S +GE    V+ +++D                                        
Sbjct: 199 LSGFSRKGEFGR-VQSLFKD---------------------------------------- 217

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                  M+ +G V PN  +F+ +++   K G +  A  LF EM  +GC  +V  YN LI
Sbjct: 218 -------MLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G+C+  +  E+  LLREM  SG  P   + N +     +   +  A+ L  ++   G E
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P     + +I  LC+ GK   AF    DM+  G  PD       + GL   +R+  + EL
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F+ +    C P +  YN+++  LCKA+R  +  ++F+E+  +G  P V    +++    +
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449

Query: 547 SGNIDQA 553
           S + D A
Sbjct: 450 SDDKDAA 456



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 1/300 (0%)

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +Q+        YN L++ L  S R +  Y    +M  +G  P  +T   + R LC+ Q  
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRF 68

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A ++ R M  QG  P V   ++LI  LC+  K  EA   L +M+  G  P++V Y + 
Sbjct: 69  EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL  + ++  A++LF  +   GC PD V YN++I G  K   + EA  LF EM+ KG 
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           IP+V TYN L++G+ + G   +       ML ++   P++ T+  L+DG C  G   +A 
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDML-RQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L+ EM   GC P+ +++  LI G+C   +P  A    R M   G+ PD+  +  LI  +
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 195/469 (41%), Gaps = 50/469 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           ++  L+    K  R D     ++ M  +G   +   Y  ++  LC+ ++ E A  ++  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G +P+    S LI                                   L     +D+
Sbjct: 79  AAQGCSPNVFSYSILIAG---------------------------------LCRGQKVDE 105

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  MI G                   PN  ++  +++ L K GKL  A+ LF  M 
Sbjct: 106 AAELLNEMIDG----------------GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  +  +YN LIDG      + E+Y L  EM E G  PT FT NS+     R+ +  
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
              +L + M  QG  P +     L+   CK G  +EA R   +M   G  PD+V Y+  I
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+    +   A  L R++   G  PD+V+YNI+I G  K+  +  A  LF E+   GL 
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   +Y+ +I+  C++G +  A +    M+   S +PD      L+ GLC   R  ++  
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS-APDAAVVIPLVIGLCRGERLTESCE 388

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           L+  M +  C P    +  L+  LCK  R       F  + E+G  PD+
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 205/462 (44%), Gaps = 51/462 (11%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L+++ R   +     D++ + C  +    G+L+R L      EEA  +F  +  +G C 
Sbjct: 26  VLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG-CS 84

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN +SY+ L+  LC+   VD     L EM D G   +  T   LL   C  G+  +A+ +
Sbjct: 85  PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+ ++  G   D  V+++L+  FSK G++ +A  L E M +        T+  L+ GF +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K    +   LF  M + G   +   ++ ++ G CK   +  A +L+ EM+  G  PD   
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD--- 261

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                          +  N+++R + S G   +A  LL+ MI  
Sbjct: 262 ------------------------------VVSYNTLIRGMCSKGKPHEAQRLLREMI-- 289

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         +  V P+  S++I+I+   K G LD A+ LF E+ + G   + F Y
Sbjct: 290 --------------RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + +ID LC + ++  ++ + ++M  +G  P    +  +   LCR + +  +  L + M  
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
               P +    LL+ +LCK  ++ +      ++ + GF PD+
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 225/488 (46%), Gaps = 39/488 (7%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA--LQLYSEMKG 233
           L+   V+++++  A  LFD M  SG + +   Y V++       +L +A   +L SEM+ 
Sbjct: 180 LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEM 239

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-----------NSIMRI 282
            G+ P+       +   S     T  V   W     N + +LC           N++++ 
Sbjct: 240 KGVKPNAATYGTYLYGLSR----TRQVASAW-----NFLQMLCQRGNPCNTYCFNAVIQG 290

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G + +A  +  AM KG  +                P+T S+ I+++ L K G +  
Sbjct: 291 FCREGQVQEAIEVFDAMKKGGLV----------------PDTHSYSILVDGLCKQGDVLT 334

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
              L  EM + G    +  Y++L+ GLC + ++E ++EL R +EE GFK  H   + +  
Sbjct: 335 GYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILN 394

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C+  ++    +L   M      P   + T LI   C+H    +A      M+  G  P
Sbjct: 395 GCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSP 454

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++V  +  + G    + +D A      +   G  P++  Y +II+GLCK  +      +F
Sbjct: 455 NVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIF 514

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI +G +P    Y+++I+ + K+  + +A     +ML+ E   P+V TYT+LI+GLC 
Sbjct: 515 ADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLD-EGTKPNVFTYTSLINGLCH 573

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             R  + + L+  M  +G  P+RI + +LI   CK    +AAL  FR M + G+  D F+
Sbjct: 574 DDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFL 633

Query: 643 FVALISAF 650
           +  LI  F
Sbjct: 634 YTCLIGGF 641



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 253/572 (44%), Gaps = 34/572 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM--RLKEM 92
           FL++CL     +  A  LFD +K  G   PN YSY+ L+ A      + L E    L EM
Sbjct: 179 FLLKCLVERNQIIYARSLFDDMKSSGPS-PNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEV 151
           +  G   +  T    L     + Q   A +    +   G   + + F+ ++  F + G+V
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A E+ + M    +  +  ++ +L+ G  K+  V     L  +M ++G A     Y  +
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           + GLC+  ++E+A +L+  ++  G   D  + S ++  C     + + V ++W D     
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEV-VCDLWND----- 411

Query: 272 MTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSF 327
                      +V +  +  AYN   L+ A  +   + D +GV  LM+  G VSPN  + 
Sbjct: 412 -----------MVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSG-VSPNVVTC 459

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+++   K+  +D A     ++ Q G + N+ +Y  +I+GLC  N+ +  + +  +M +
Sbjct: 460 TILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIK 519

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G+ P     + +     +   +  A  L  KM  +G +P V   T LI  LC   +  E
Sbjct: 520 RGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPE 579

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
                  M+ EG  PD + Y++ I        +  ALE+FR +   G   D   Y  +I 
Sbjct: 580 VVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIG 639

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G  K   +  A+ L  EM  KGL PSV TY  LI G+ K G+  +A +  + ML+    +
Sbjct: 640 GFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQA-GIT 698

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           PD           CI G  +DA    +  EEK
Sbjct: 699 PDAKLS-------CILGFGNDADGFEDSREEK 723



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/597 (25%), Positives = 249/597 (41%), Gaps = 93/597 (15%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEV--DKACELIERMDD 163
           LL+      Q   A S+F+++   G   + + +S+L+ A++    +   +A EL+  M+ 
Sbjct: 180 LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEM 239

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             ++ N  T+   ++G  +  +V  A      + + G   +   ++ +I G C+  Q++ 
Sbjct: 240 KGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQE 299

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A++++  MK  G+ PD    S L+                                   L
Sbjct: 300 AIEVFDAMKKGGLVPDTHSYSILVDG---------------------------------L 326

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G +   Y+LL             VEM    +  ++P   S+  +++ L + GK++LA
Sbjct: 327 CKQGDVLTGYDLL-------------VEMA---RNGIAPTLVSYSSLLHGLCRAGKVELA 370

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LFR + + G   +  +Y+ +++G C    +E   +L  +M    F P  +   S+   
Sbjct: 371 FELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYA 430

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            CR +++  AL +   M   G  P V   T+L+    K     EAF FL  + Q G +P+
Sbjct: 431 FCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPN 490

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  Y   I GL  + + D    +F D+   G  PD V Y+III    KA ++ EA  LF+
Sbjct: 491 LCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFH 550

Query: 524 EMITKGLIPSVATYNLLING-----------------------------------WCKSG 548
           +M+ +G  P+V TY  LING                                   +CK  
Sbjct: 551 KMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRS 610

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           N+ +A L + R + K   S D   YT LI G       D A  L  EM  KG  P+ +T+
Sbjct: 611 NM-KAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTY 669

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             LI G  K    R A + +  M + G+ PD     A +S  L   N    FE  +E
Sbjct: 670 TNLIIGYFKIGDERKANMTYNSMLQAGITPD-----AKLSCILGFGNDADGFEDSRE 721



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 40/377 (10%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR--LEESYELLREM 385
           + ++  L++  ++  A SLF +M   G   NV+ Y+ L+    + +R  L E++ELL EM
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237

Query: 386 EESGFKPTHFT-----------------------------------LNSMFRCLCRRQDV 410
           E  G KP   T                                    N++ +  CR   V
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ +   M+  G  P     ++L+  LCK G  +  +  L +M + G  P +V YS+ 
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL    +V+LA ELFR +   G   D + Y+II++G C+   +    DL+N+M+    
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNF 417

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDA 589
           +P    Y  LI  +C+  N+  A+     ML  +SG SP+V+T T L+DG       D+A
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELML--DSGVSPNVVTCTILVDGFGKERMIDEA 475

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +  +++ + G  PN   +  +I GLCK ++       F  M ++G  PD  V+  +I +
Sbjct: 476 FLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDS 535

Query: 650 FLSELNPPLAFEVLKEM 666
           F+  L  P AF +  +M
Sbjct: 536 FVKALKLPEAFRLFHKM 552


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 261/556 (46%), Gaps = 41/556 (7%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           L DQ+ R     P+  SYN +L  L ++ C  D + +  + +         +T     + 
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARA 184

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C  G+ D+AL++   +  HG V + V +  ++ A    G V +A  L+  M       +
Sbjct: 185 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  ++ G     RV +A +L D+M   G       Y  ++ GLC+ +Q + A  +  
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML- 303

Query: 230 EMKGSGITPDFEIL--SKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIM 280
                G  P+  ++  + +I  C  EG+L     E++E         D +T ++L + + 
Sbjct: 304 -----GRVPELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           ++    G I  A  LL+ M K               KG  +PN  ++ I++++  K+G  
Sbjct: 358 KL----GRIGSAVRLLREMEK---------------KG-FAPNVVTYTIVLHSFCKNGMW 397

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D   +L  EM+  G   N   YN +I  LC   R++E+  L++EM   G  P   + N++
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC  + +  A ++   +  +G     + +NT+ I  L + G+  +A R   +M+  G
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI-IHALLRDGRWQDAVRLAKEMILHG 516

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D+V Y+  I  +     VD +L L  ++   G  P+ V+YNI+IS LCK +RV +A 
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L  +M+ +GL P + TYN LING CK G +  A+  L + L  E+  PD+ITY  LI  
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK-LHNENVHPDIITYNILISW 635

Query: 580 LCIAGRPDDAIMLWNE 595
            C     DDA ML N 
Sbjct: 636 HCKVRLLDDAAMLLNR 651



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 249/548 (45%), Gaps = 59/548 (10%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R++ +D V    F      G   R L  +G  +EA  L   + R G CVP+   Y  ++ 
Sbjct: 164 RMVHRDRVPPTTF----TFGVAARALCRLGRADEALALLRGMARHG-CVPDAVLYQTVIH 218

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
           ALC    V      L EM   G   D  T   +++  C  G+  +A  + + ++  G + 
Sbjct: 219 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 278

Query: 135 E-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
               +  LL    +  + D+A  ++ R+ + N+ L    F  +I G + + ++ +A +L+
Sbjct: 279 GVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELY 334

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + M   G   DA  Y +++ GLCK  ++  A++L  EM+  G  P+              
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN-------------- 380

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                          V T T++ +S  +    NG  D    LL+ M              
Sbjct: 381 ---------------VVTYTIVLHSFCK----NGMWDDTRALLEEMSA------------ 409

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              KG ++ N+  ++ +I  L KDG++D A+ L +EM   GC  ++  YN +I  LCN+ 
Sbjct: 410 ---KG-LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           ++EE+  +   + E G      T N++   L R      A+ L ++M + G    V    
Sbjct: 466 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 525

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LIK +CK G    +   L +M ++G  P+ V Y+  I  L   +RV  ALEL + +   
Sbjct: 526 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD+V YN +I+GLCK   +  A +L  ++  + + P + TYN+LI+  CK   +D A
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645

Query: 554 MLCLSRML 561
            + L+R +
Sbjct: 646 AMLLNRAM 653



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 210/478 (43%), Gaps = 21/478 (4%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF V      +  R D+AL L   M + G   DA +Y  +I  LC    +  A  L +EM
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G   D      ++      G              V     L + +M      G +  
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGR-------------VREAARLVDRMMTKGCMPGVMTY 283

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREM 350
            + LLQ + +    AD    ML    G V   N   F+ +I   L +GKL  A  L+  M
Sbjct: 284 GF-LLQGLCRVR-QADEARAML----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETM 337

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +   Y+ L+ GLC   R+  +  LLREME+ GF P   T   +    C+    
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 397

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                L+ +M  +G     +    +I  LCK G+  EA   + +M  +G  PDI  Y+  
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L + ++++ A  +F ++   G   + + YN II  L +  R  +A  L  EMI  G 
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              V +YN LI   CK GN+D++++ L  M EK    P+ ++Y  LI  LC   R  DA+
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI-KPNNVSYNILISELCKERRVRDAL 576

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  +M  +G AP+ +T+  LI GLCK     AAL     +  + + PD+  +  LIS
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 218/515 (42%), Gaps = 56/515 (10%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE----I 242
           D+AL L D +         ++   ++  L   + L +  QL       G+ P F     +
Sbjct: 89  DRALSLLDSLPPGFLPLRESLLLPLLRSLPPGRALHLLDQLPRRF---GVQPSFRSYNVV 145

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           LS L  +      L L  + +  DR V   T       R L   G  D+A  LL+ M + 
Sbjct: 146 LSVLARADCHADALALYRRMVHRDR-VPPTTFTFGVAARALCRLGRADEALALLRGMAR- 203

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                          G V P+   +  +I+ L   G +  A +L  EM  +GC  +V  +
Sbjct: 204 --------------HGCV-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR-RQ------------- 408
           ++++ G+C   R+ E+  L+  M   G  P   T   + + LCR RQ             
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308

Query: 409 -------DVVG----------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                   V+G          A  L   M ++G +P     ++L+  LCK G+   A R 
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M ++GF P++V Y+  +         D    L  ++ A G   +   YN +I  LCK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  L  EM ++G  P + +YN +I   C +  +++A      +LE E    + I
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE-EGVVANGI 487

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY T+I  L   GR  DA+ L  EM   GC+ + +++  LI  +CK      +LV    M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            EKG+KP+   +  LIS    E     A E+ K+M
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 295/618 (47%), Gaps = 40/618 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  + N L++AL +S +  L     + M          +L+ L++ + ++ +      
Sbjct: 71  LPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFG 130

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   ++  G+ V+  + +I+L    + G V +A  LI  M   ++  +  ++  LI+G  
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  ++ +A+ L  +M  +G   ++     ++ GLCK+ +++ A++L   MK  G   D  
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 242 ILSKLITSCSDEGELTLLVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           +   LI+   + G L    KE++++        +V T + L + + R+    G   +A  
Sbjct: 251 LYGTLISGFCNNGNLD-RGKELFDEMLGKGISANVVTYSCLVHGLCRL----GQWKEANT 305

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L AM      A+ G+           P+  ++  +I+ L KDG+   A+ L   M + G
Sbjct: 306 VLNAM------AEHGIH----------PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +   YN L+ GLC    + +++++LR M E G K    T N++ + LC +  V  AL
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 415 NLVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
            L   M    +  EP V    +LI  LCK G+  +A +    MV++G   ++V Y+  +G
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G +   ++  A+EL++ +   G  P+   Y+I+I G CK + +  A+ LF EM T GL P
Sbjct: 470 GCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS----PDVITYTTLIDGLCIAGRPDD 588
           ++  YN L+   CK G+++QA     + L +E G+    PD+I++ T+IDG   AG    
Sbjct: 530 ALFDYNTLMASLCKEGSLEQA-----KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L  +M E G  P+ +TF  LI  L K      A      M   G  PD  V+ +L+ 
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644

Query: 649 AFLSELNPPLAFEVLKEM 666
              S+ +      +L +M
Sbjct: 645 GLSSKGDTTEIINLLHQM 662



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 217/470 (46%), Gaps = 19/470 (4%)

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           S+  +A+ LF            A  + ++  L +++   +A  +Y  M    + P F  L
Sbjct: 53  SQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSL 112

Query: 244 SKLITSCSD--EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           S LI   +D  + +L   V  +   R       + N +++ L  NG + +A  L++ M  
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREM-- 170

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          + +VSP+  S++ +IN L K  KL  A+ L  EM   GC  N   
Sbjct: 171 --------------GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 216

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
              L+DGLC   R++E+ ELL  M++ GF        ++    C   ++     L  +M 
Sbjct: 217 CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 276

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G    V   + L+  LC+ G+  EA   L  M + G  PD+V Y+  I GL    R  
Sbjct: 277 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 336

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A++L   +   G  P  V YN+++SGLCK   V +A  +   MI KG    V TYN L+
Sbjct: 337 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 396

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            G C  G +D+A+   + M + E+   P+V T+  LI GLC  GR   A+ +  +M +KG
Sbjct: 397 KGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              N +T+  L+ G  K  + + A+  ++ + + G  P+ F +  LI  F
Sbjct: 457 SCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 235/525 (44%), Gaps = 22/525 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA  L  ++ R+ +  P+  SYN L+  LCK+  +      L EM+  G   +  T
Sbjct: 158 GGVFEAMGLIREMGRKSVS-PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 216

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L+   C  G+ D+A+ +   +   G+  D  ++  L+  F   G +D+  EL + M 
Sbjct: 217 CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 276

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I  N  T+  L+HG  +  +  +A  + + M + G   D   Y  +I GLCK+ +  
Sbjct: 277 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 336

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNS 278
            A+ L + M   G  P     + L++    EG       +L   I + +  + +T   N+
Sbjct: 337 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTY--NT 394

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +M+ L   G +D+A  L  +M   E                + PN  +F+++I  L K+G
Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNE--------------NCLEPNVFTFNMLIGGLCKEG 440

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +L  A+ + R+M + G   N+  YN L+ G   + +++E+ EL +++ + GF P  FT +
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C+ + +  A  L  +MR  G  P +     L+  LCK G   +A     +M   
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              PDI+ ++  I G +         EL   +   G  PD + ++ +I+ L K   + EA
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +     M+  G  P    Y+ L+ G    G+  + +  L +M  K
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 1/324 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+SLF        + +    N L+D L  S     ++ + R M      P+  +L+++  
Sbjct: 58  AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           C    Q       +V  +  +G    V    +++K LC++G   EA   + +M ++   P
Sbjct: 118 CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSP 177

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           DIV Y+  I GL   K++  A+ L  ++ A GC P+ V    ++ GLCK  R+ EA +L 
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
             M  KG    V  Y  LI+G+C +GN+D+       ML K   S +V+TY+ L+ GLC 
Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK-GISANVVTYSCLVHGLCR 296

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+  +A  + N M E G  P+ +T+  LI GLCK  R   A+    +M EKG +P    
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  L+S    E     AF++L+ M
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMM 380



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 1/295 (0%)

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +++  E+  L     +    P+  T N +   L R ++   A ++ R+M      P    
Sbjct: 52  NSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGS 111

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            + LI+      K    F  +  +++ GF  ++   +  + GL     V  A+ L R++ 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
                PD+V+YN +I+GLCKA+++ EA  L  EM   G  P+  T   L++G CK G +D
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +AM  L  M +K+    DV+ Y TLI G C  G  D    L++EM  KG + N +T+  L
Sbjct: 232 EAMELLEAM-KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 290

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + GLC+  + + A      M E G+ PD+  +  LI     +     A ++L  M
Sbjct: 291 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 164/357 (45%), Gaps = 17/357 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+N +YN LL  LCK   V      L+ M + G   D  T   L++  C+ G+ D+AL +
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411

Query: 124 FNEIIDH-GWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           FN + D+   ++ +VF+  +L+    K G + KA ++  +M       N  T+ +L+ G 
Sbjct: 412 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +K  ++ +A++L+ ++   GF  ++  Y ++I G CK + L +A  L+ EM+  G+ P  
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + L+ S   EG L        E  + N     C     I+  N  ID          
Sbjct: 532 FDYNTLMASLCKEGSLEQAKSLFQEMGNAN-----CEP--DIISFNTMIDGTLKAGDFQF 584

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E      ++M M+  G + P+  +F  +IN L K G+LD A S    M   G   +  
Sbjct: 585 VKE------LQMKMVEMG-LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDAL 637

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +Y++L+ GL +     E   LL +M   G       ++++  CLC     V  + L+
Sbjct: 638 VYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 3/233 (1%)

Query: 436 IKELCK--HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           ++ LC+  + +  EA       +    LP     +  +  L   +   LA  ++R +   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P   + + +I     AQ+      +   ++ +G   +V   N+++ G C++G + +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           M  L R + ++S SPD+++Y TLI+GLC A +  +A+ L  EME  GC PN +T   L+ 
Sbjct: 164 M-GLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 222

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLCK  R   A+     MK+KG   D+ ++  LIS F +  N     E+  EM
Sbjct: 223 GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 177/689 (25%), Positives = 293/689 (42%), Gaps = 82/689 (11%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-- 92
           FL+ C    G+V++A  +F    + G+ +P +  Y  +L +L  S  VDL+     ++  
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCR 209

Query: 93  ---QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK-- 147
              +  G     + L  L   +C  G+  KAL        H  V E  F + +V+ +K  
Sbjct: 210 GGIEPSGVSAHGFVLDAL---FCK-GEVTKALDF------HRLVMERGFRVGIVSCNKVL 259

Query: 148 ----WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                 +++ A  L+  + DC    N  TFC LI+GF K+  +D+A  LF  M + G   
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVK 261
           D   Y  +I G  K   L M  +L+S+    G+  D  + S  I      G+L    +V 
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLM------ 314
           +    + ++   +    +++ L  +G I +A+ +  Q + +G   + V    L+      
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 315 ------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                       + K    P+   + ++++ L K G +  A+    +M       NV ++
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+LIDG C  NR +E+ ++ R M   G KP   T  ++ R       +  AL L  +M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G EP       LI   CKH K     +    M +     DI   +  I  L    R++ 
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A + F ++      PD+V YN +I G C  +R+ EAE +F  +      P+  T  +LI+
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679

Query: 543 GWCKSGNIDQAMLCLSRMLEKESG----------------------------------SP 568
             CK+ ++D A+   S M EK S                                   SP
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
            +++Y+ +IDGLC  GR D+A  ++++  +    P+ + +  LI G CK  R   A + +
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPP 657
             M   G+KPD      L+   LSE NPP
Sbjct: 800 EHMLRNGVKPD-----DLLQRALSEYNPP 823



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 235/553 (42%), Gaps = 63/553 (11%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS-------------ILLVAFSKWG 149
           +   +  V   +G FD A  VF+E+I +   D +V                L+    ++G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VDKA E+        + + + +   +++  +   RVD     FDK+ + G         
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG--------- 211

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
                                ++ SG++    +L  L   C  E    L    +  +R  
Sbjct: 212 ---------------------IEPSGVSAHGFVLDALF--CKGEVTKALDFHRLVMERGF 248

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               + CN +++ L S   I+ A  LL  ++   P                +PN  +F  
Sbjct: 249 RVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGP----------------APNVVTFCT 291

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN   K G++D A  LF+ M Q G   ++  Y+ LIDG   +  L   ++L  +    G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            K      +S      +  D+  A  + ++M  QG  P V   T+LIK LC+ G+  EAF
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                +++ G  P IV YS+ I G      +     L+ D+   G  PDVV Y +++ GL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            K   +  A     +M+ + +  +V  +N LI+GWC+    D+A L + R++      PD
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA-LKVFRLMGIYGIKPD 530

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V T+TT++    + GR ++A+ L+  M + G  P+ + +  LI   CK  +P   L  F 
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590

Query: 630 MMKEKGMKPDMFV 642
           +M+   +  D+ V
Sbjct: 591 LMQRNKISADIAV 603



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 187/380 (49%), Gaps = 21/380 (5%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI---IINTL 334
           +I  +L+ NG  D A  +   MI        G +  ++  G++   +   D+   ++   
Sbjct: 104 TIAHVLIRNGMFDVADKVFDEMITNR-----GKDFNVL--GSIRDRSLDADVCKFLMECC 156

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE---ESYELL--REMEESG 389
            + G +D AL +F   TQ+G +        +++ L  S+R++   + ++ L    +E SG
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                F L+++F   C+  +V  AL+  R +  +G    +     ++K L    +   A 
Sbjct: 217 VSAHGFVLDALF---CK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVAS 271

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R L+ ++  G  P++V +   I G      +D A +LF+ +   G  PD++AY+ +I G 
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            KA  +     LF++ + KG+   V  ++  I+ + KSG++  A +   RML  +  SP+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML-CQGISPN 390

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+TYT LI GLC  GR  +A  ++ ++ ++G  P+ +T+ +LI G CKC   R+    + 
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450

Query: 630 MMKEKGMKPDMFVFVALISA 649
            M + G  PD+ ++  L+  
Sbjct: 451 DMIKMGYPPDVVIYGVLVDG 470


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 232/486 (47%), Gaps = 22/486 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A+ LF+ +           ++ IIG + K K   +A+ L  +M   G+TP    LS 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 246 LITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN--------- 294
            I      GE+     V  I   R      +   ++M+ L  NG + +A +         
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 295 -LLQAMIKGEPIADV--------GVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLAL 344
            LL  +  G  I  +          ++L   +G  V PN   +++II++  KD     A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L+ ++  +G   ++  Y +LI G C + +  E  +L+ EM      P  +T N +    
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           CR+  ++ A  +   M  +G +P +     LI   C HG  +EA +    + + G LPD+
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  I G    KR+D A+ LF ++       D+V Y+ +I GLCK+ R++ A +LF+ 
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +   G  P+V TYN+LI+ +CK  +ID  +  L +++  +  +P V+TY  LI+G C + 
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIE-LFKLMCGKGLTPTVLTYNILINGYCKSK 483

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A+ L + M+ K  AP+ IT+ +L  GLCK  R   A   F++M   G   D+  + 
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYN 543

Query: 645 ALISAF 650
            L+ AF
Sbjct: 544 VLLDAF 549



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 246/556 (44%), Gaps = 70/556 (12%)

Query: 38  RCLGSVGLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           + L S   +++A  LF+  +  + L  P+   +N ++ ++ K     +    LK+M   G
Sbjct: 57  KILSSFNGIDDAVTLFNHLINMQPL--PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKG 114

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
                +TL+  +  YC+ G+   A SV   ++  G+                        
Sbjct: 115 VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGY------------------------ 150

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                     + N  T   ++ G      V KA+   D +   G   D   Y  +I GLC
Sbjct: 151 ----------QPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE-----GELTLLVKEIWEDRDVN 270
           K  +   A QL  EM+G  + P+  I + +I S C DE      +L L + ++  D D+ 
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T T    S++R     G   +   L+  M+                   ++PN  +F+++
Sbjct: 261 TYT----SLIRGFCRTGQWGEVKQLMCEMVNKN----------------INPNVYTFNVL 300

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   + GK+  A  +F  M + G   ++  +N LI G C    + E+ +L   + E G 
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 391 KPT--HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
            P    +T+  +  C C+R D   A++L  +MR +     +   + LI  LCK G+   A
Sbjct: 361 LPDVWSYTILIIGYCKCKRID--EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           +   + +  +G  P+++ Y+  I     I+ +D+ +ELF+ +C  G  P V+ YNI+I+G
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CK++R+ EA +L + M +K L P   TYN L +G CKSG I  A      M     G P
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM--HVGGPP 536

Query: 569 -DVITYTTLIDGLCIA 583
            DV TY  L+D  C A
Sbjct: 537 VDVATYNVLLDAFCKA 552



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 193/421 (45%), Gaps = 52/421 (12%)

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +IL S   ID A  L   +I  +P+                P+   F+ II +++K    
Sbjct: 57  KILSSFNGIDDAVTLFNHLINMQPL----------------PSVIQFNTIIGSVVKMKHC 100

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
            +A+SL ++M   G   ++F  +  I+  C+   +  ++ +L  + + G++P + TL ++
Sbjct: 101 PVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTV 160

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            + LC   +V  A++    +  QG          LI  LCK G++++AF+ L +M  +  
Sbjct: 161 MKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVV 220

Query: 461 LPDIVCYSAAIGGL-----------IDIKRVDLALE--------LFRDICAHG------- 494
            P+IV Y+  I              + +K VD+ ++        L R  C  G       
Sbjct: 221 KPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQ 280

Query: 495 ---------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
                      P+V  +N++I   C+  ++ EA+ +FN M+ +G  P + T+N LI+G C
Sbjct: 281 LMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHC 340

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
             GN+ +A      + E+    PDV +YT LI G C   R D+A+ L+NEM  K    + 
Sbjct: 341 LHGNVLEARKLFDTVFER-GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDI 399

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           + + +LI GLCK  R   A   F  +   G  P++  +  LI AF    +  +  E+ K 
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 666 M 666
           M
Sbjct: 460 M 460


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 234/508 (46%), Gaps = 65/508 (12%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS--DEGELTLLVKEIWE 265
           +++II  L K+   E+  Q+  E+K  G +   +  + LI + +  D  E  +   E+ +
Sbjct: 94  HNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMK 153

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           D D        N+++ ++V    +  A  +   M+K   +                PN +
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCL----------------PNIA 197

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F I+I+ + K GK   AL +F EMTQ   + N   Y  +I GLC + + + +Y L   M
Sbjct: 198 TFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAM 257

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-----------------------RKMRV 422
           ++ G  P   T N++    C+   V  AL L+                       R  R 
Sbjct: 258 KDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRF 317

Query: 423 QGHEPWVK----HN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           +  + W +    HN        T+++K L K GK  +A R L +M + G +PD  CY+A 
Sbjct: 318 EDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNAL 377

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G  D+  +D A  L  +I  + C      Y I+I G+C++  V +A+ +FNEM   G 
Sbjct: 378 IKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGC 437

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRM---------LEKESGSP---DVITYTTLID 578
            PSV T+N LI+G+CK+GNI++A L   +M         L    G+    D  +  T+++
Sbjct: 438 YPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVE 497

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC +G    A  +  ++ + G APN IT+  LI G CK      A   F+ ++ KG+ P
Sbjct: 498 QLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSP 557

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   +  LI+  LS      AF VL ++
Sbjct: 558 DSVTYGTLINGLLSANREEDAFTVLDQI 585



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 158/632 (25%), Positives = 269/632 (42%), Gaps = 39/632 (6%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S+N +++ L K    +L    LKE++  G+       T L+Q Y      +KA+  F  +
Sbjct: 93  SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            D     D   ++ +L    +   V  A  +  RM   N   N  TF +LI G  K  + 
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKT 212

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             ALQ+FD+MT+     +   Y +II GLC+ ++ ++A +L+  MK  G  PD    + L
Sbjct: 213 QNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNAL 272

Query: 247 ITSCSDEG---ELTLLVKEIWEDR---DVNTMTLLCNSIMRIL-----------VSNGSI 289
           +      G   E   L+K   +DR   D    + L + + R             ++  +I
Sbjct: 273 LHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNI 332

Query: 290 DQAYNLLQAMIKGEPIADVGVEML-----MIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                L   M+KG   A    + L     M  +G V P+T  ++ +I      G LD A 
Sbjct: 333 KPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV-PDTHCYNALIKGYCDLGLLDEAK 391

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           SL  E+++  C  +   Y  LI G+C S  + ++ ++  EME+ G  P+  T N++    
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 405 CRRQDVVGALNLVRKMRV-----------QGHEPWVKHNTL--LIKELCKHGKAMEAFRF 451
           C+  ++  A  L  KM +           QG    +   +L  ++++LC  G  ++A+  
Sbjct: 452 CKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNI 511

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  +   GF P+I+ Y+  I G      ++ A +LF+++   G  PD V Y  +I+GL  
Sbjct: 512 LMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLS 571

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A R  +A  + ++++  G  P    Y   +   C+   I  A     + L    G    +
Sbjct: 572 ANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEV 631

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
             +  ++     G  ++A+    EM+ K        +   + GLC+  R   AL  F  +
Sbjct: 632 LKS--VEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTL 689

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +E  +       V LI   L   N  LA E+ 
Sbjct: 690 EEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIF 721



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 253/590 (42%), Gaps = 66/590 (11%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++K  C  +      LI  +   G  + A  +FD++ +  + +PN  +Y  ++  LC++ 
Sbjct: 187 MLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRI-LPNKITYTIIISGLCQAQ 245

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFS 139
             D+       M+D+G   D  T   LL  +C  G+ D+AL +        +V D+  +S
Sbjct: 246 KADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYS 305

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+    +    + A     +M + NI+ +   + +++ G  K  +   AL+L ++MT+ 
Sbjct: 306 CLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTER 365

Query: 200 GFASDAAMYDVIIGGLC--------KNKQLEM---------------------------A 224
           G   D   Y+ +I G C        K+  LE+                           A
Sbjct: 366 GLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDA 425

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMR 281
            Q+++EM+  G  P     + LI      G +    LL  ++   R+ +    L     R
Sbjct: 426 QQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANR 485

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGV------EMLMIFKGTVSPNTSSFDIIINTLL 335
           +L      D A   LQ M+  E + D G+       ++ +     +PN  +++I+I+   
Sbjct: 486 VL------DTAS--LQTMV--EQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFC 535

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K G ++ A  LF+E+   G   +   Y  LI+GL ++NR E+++ +L ++ ++G  P   
Sbjct: 536 KAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITE 595

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKM--RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
              S     CRR  +  A +L  K    + G +  V  +   ++E  + G+  EA R L 
Sbjct: 596 VYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKS---VEENFEKGEVEEAVRGLL 652

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M  +     +  Y+  + GL    R++ AL++F  +  H       +   +I  L K  
Sbjct: 653 EMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVG 712

Query: 514 RVAEAEDLFNEMITKG--LIPSVATYNLLINGWCKSGNI-DQAMLCLSRM 560
            +  A ++F   I KG  L+P +   N L+    +S +  ++A   LSRM
Sbjct: 713 NLDLAAEIFLYTIDKGYMLMPRIC--NRLLKSLLRSEDKRNRAFDLLSRM 760



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 180/393 (45%), Gaps = 35/393 (8%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           + L  ++ K+ CF S      LI  +   GLV +A  +F+++++ G C P+  ++N L++
Sbjct: 391 KSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHG-CYPSVVTFNALID 449

Query: 75  ALCKSCSVDLVEMRLKEM-------------QDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
             CK+ +++  ++   +M             Q      D  +L  +++  C+SG   KA 
Sbjct: 450 GFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY 509

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           ++  ++ D G+    + ++IL+  F K G ++ A +L + +    +  +  T+  LI+G 
Sbjct: 510 NILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGL 569

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +  +R + A  + D++ K+G      +Y   +   C+  ++ +A  L+ +   S    D 
Sbjct: 570 LSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDS 629

Query: 241 EILSKLITSCSDEGELTLLVKEIWE-DRDVNTMTLLCNSIMRI-LVSNGSIDQAYNLLQA 298
           E+L K +    ++GE+   V+ + E D  +N   L   +I  I L   G +++A  +   
Sbjct: 630 EVL-KSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFT 688

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           + +   +              V+P   S   +I  LLK G LDLA  +F      G M  
Sbjct: 689 LEEHNVL--------------VTP--PSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLM 732

Query: 359 VFLYNNLIDGLCNS-NRLEESYELLREMEESGF 390
             + N L+  L  S ++   +++LL  M+  G+
Sbjct: 733 PRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGY 765



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 1/203 (0%)

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            FRF     +   L   V ++  I  LI     +L  ++ ++I   G      A+ ++I 
Sbjct: 75  GFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQ 134

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
              K   + +A + F  M      P V TYN +++   +   +  A+   +RML K +  
Sbjct: 135 AYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRML-KLNCL 193

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P++ T++ LIDG+C +G+  +A+ +++EM ++   PN+IT+  +I+GLC+  +   A   
Sbjct: 194 PNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRL 253

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  MK+ G  PD   + AL+  F
Sbjct: 254 FIAMKDHGCIPDSVTYNALLHGF 276


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 162/614 (26%), Positives = 283/614 (46%), Gaps = 27/614 (4%)

Query: 52  LFDQVKRE--GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LFD++ RE      P+  +Y+ L+   C+   ++        +   GW  +      LL+
Sbjct: 179 LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLK 238

Query: 110 VYCNSGQFDKALSV-FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNI 166
             C++ + D+A ++    + + G     V ++ L+  F      ++A EL+  M DD  +
Sbjct: 239 GLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 167 RLNEK--TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
                  ++  +I+GF ++ +VDKA  LF +M   G   D   Y+ +I GLCK + ++ A
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRA 358

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRI 282
             ++ +M   G+ P     + LI      G+   +V+ + E    D+     +   ++  
Sbjct: 359 KAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDY 418

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGV-EMLMIF----KGTVSPNTSSFDIIINTLLKD 337
           L  NG   +A N+  ++I+     D  + E + IF    +  +SPN  ++  +I+ L K 
Sbjct: 419 LCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++D A+  F +M             N + GLC   + E++ EL+ EM + G +      
Sbjct: 479 GRVDDAILKFNQMI------------NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVF 526

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++   LCR   V+ A  L+  M   G  P V     L+   C  G+  EA + L  MV 
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P+   Y+  + G    +R+D A  L R++  +G  PDVV YN I+ GL +  R +E
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A++L+  MI       + TYN+++NG CK+  +D+A      +  K      +IT+  +I
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSK-GLQLHIITFNIMI 705

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             L   G+ +DA+ L+  +   G  P+  T+  +   L K        V F  M+E G  
Sbjct: 706 GALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTA 765

Query: 638 PDMFVFVALISAFL 651
           P+  +  AL+  FL
Sbjct: 766 PNSRMLNALVRRFL 779



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 260/567 (45%), Gaps = 27/567 (4%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACE-L 157
           D+ T + L+  +C  G+ +   +VF  I+  GW   H VF+ LL        +D+A   L
Sbjct: 194 DRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL 253

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS---DAAMYDVIIGG 214
           + RM +     N  ++  L+ GF  ++R ++AL+L   M      S   D   Y+ +I G
Sbjct: 254 LWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVING 313

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNT 271
             +  Q++ A  L+ +M   GI PD    + +I     + ++    K +++   D+ V  
Sbjct: 314 FFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC-KAQVVDRAKAVFQQMLDKGVKP 372

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI----FKGTVSPNTSSF 327
                N ++   +S G   +   LL+ M   +   D  +  L++      G  +   + F
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 328 DIIINTLLK-DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           D +I   +K D  +D A+ +F +M Q G   NV  Y  LID LC   R++++     +M 
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM- 491

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                     +N ++  LC  +    A  LV +M  QG    V     L+ +LC+ G+ M
Sbjct: 492 ----------INEVY-GLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVM 540

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA R +  M++ G  PD++ Y+  + G     R D A +L   + + G  P+   YN ++
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G CKA+R+ +A  L  EM+  G  P V TYN +++G  ++G   +A      M+   + 
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRT- 659

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             D+ TY  +++GLC     D+A  ++  +  KG   + ITF  +I  L K  +   A+ 
Sbjct: 660 QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMD 719

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
            F  +   G+ PD+  +  +    + E
Sbjct: 720 LFATISAYGLVPDVETYCLIAENLIKE 746



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 264/573 (46%), Gaps = 11/573 (1%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD---YGWGYDK 101
           L E  N+L  ++   G C PN  SYN L++  C     +     L  M D        D 
Sbjct: 246 LDEATNILLWRMPEFG-CTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDV 304

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
            +   ++  +   GQ DKA ++F ++ID G   + V ++ ++    K   VD+A  + ++
Sbjct: 305 VSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQ 364

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M D  ++ +  T+  LIHG++   +  + ++L ++M+      D  +Y +++  LCKN +
Sbjct: 365 MLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGR 424

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
              A  ++  +   GI PD  ++ + +       +  L    +     ++ +  L     
Sbjct: 425 CTEARNIFDSVIRKGIKPD-AMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDD 483

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
            IL  N  I++ Y L   + K E   ++  EML      +  +   F+ ++  L ++G++
Sbjct: 484 AILKFNQMINEVYGLC-TVEKWEKAEELVFEML---DQGIRLDVVVFNTLMCDLCREGRV 539

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  L   M ++G   +V  YN L+DG C + R +E+ +LL  M   G KP  FT N++
Sbjct: 540 MEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTL 599

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+ + +  A +L+R+M + G  P V     ++  L + G+  EA     +M+    
Sbjct: 600 LHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRT 659

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             D+  Y+  + GL     VD A ++F+ +C+ G    ++ +NI+I  L K  +  +A D
Sbjct: 660 QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMD 719

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF  +   GL+P V TY L+     K G++++  +  S M E+   +P+      L+   
Sbjct: 720 LFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAM-EENGTAPNSRMLNALVRRF 778

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              G    A    ++++EK  +    T   LI+
Sbjct: 779 LHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 241/566 (42%), Gaps = 95/566 (16%)

Query: 120 ALSVFNEIIDHGW-VDEHVFSILLVAFSKWG------EVDKACELIERM-DDCNIRL--N 169
           AL +F+ ++ H        F+ LL A S+        E      L +RM  +C+ ++  +
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ-LY 228
             T+ +LI  F +  R++    +F  + K+G+  +  +++ ++ GLC  K+L+ A   L 
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G TP+                                  +  N++++   +   
Sbjct: 255 WRMPEFGCTPN---------------------------------VVSYNTLVKGFCNENR 281

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            ++A  LL  M   + +             +  P+  S++ +IN   ++G++D A +LF 
Sbjct: 282 AEEALELLHVMADDQGL-------------SCPPDVVSYNTVINGFFREGQVDKAYNLFL 328

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M   G   +V  YN +IDGLC +  ++ +  + ++M + G KP++ T N +        
Sbjct: 329 QMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTG 388

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
                + L+ +M     EP      LL+  LCK+G+  EA      ++++G  PD +   
Sbjct: 389 KWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAM--- 445

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV------------- 515
                      +D A+ +F  +   G  P+VV Y  +I  LCK  RV             
Sbjct: 446 -----------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE 494

Query: 516 ----------AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
                      +AE+L  EM+ +G+   V  +N L+   C+ G + +A   +  ML +  
Sbjct: 495 VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML-RVG 553

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PDVI+Y TL+DG C+ GR D+A  L + M   G  PN  T+  L+ G CK  R   A 
Sbjct: 554 VRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAY 613

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFL 651
              R M   G  PD+  +  ++    
Sbjct: 614 SLLREMLMNGPTPDVVTYNTILHGLF 639



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 164/389 (42%), Gaps = 51/389 (13%)

Query: 329 IIINTLLK---DGK-LDLALS-LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           I+ N LLK   D K LD A + L   M + GC  NV  YN L+ G CN NR EE+ ELL 
Sbjct: 231 IVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290

Query: 384 EM-EESGFK--PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            M ++ G    P   + N++     R   V  A NL  +M  +G  P V     +I  LC
Sbjct: 291 VMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLC 350

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K      A      M+ +G  P    Y+  I G +   +    + L  ++  H   PD  
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCF 410

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKG---------------------LIPSVATYNL 539
            Y +++  LCK  R  EA ++F+ +I KG                     L P+V  Y  
Sbjct: 411 IYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGA 470

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESG----------------------SPDVITYTTLI 577
           LI+  CK G +D A+L  ++M+ +  G                        DV+ + TL+
Sbjct: 471 LIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLM 530

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             LC  GR  +A  L   M   G  P+ I++  L+ G C   R   A     +M   G+K
Sbjct: 531 CDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK 590

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+ F +  L+  +        A+ +L+EM
Sbjct: 591 PNEFTYNTLLHGYCKARRIDDAYSLLREM 619



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED- 520
           PD   YS  IG    + R++    +F  I   G   + + +N ++ GLC A+R+ EA + 
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE--SGSPDVITYTTLID 578
           L   M   G  P+V +YN L+ G+C     ++A+  L  M + +  S  PDV++Y T+I+
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G    G+ D A  L+ +M ++G  P+ +T+  +I GLCK      A   F+ M +KG+KP
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
               +  LI  +LS         +L+EM
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEM 400


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 238/524 (45%), Gaps = 25/524 (4%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW--GEVDKACEL 157
           D +     +Q    +G   +A+ +   +   G    + FS  +V    W  G    A E+
Sbjct: 163 DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 222

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            + M +  +  N  T+  +I G +K   ++   +L D+M   G   +A  Y+V++ GLC+
Sbjct: 223 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 282

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMT 273
             ++     L  EM    + PD    S L    S  G+    L+L  K +     +   T
Sbjct: 283 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYT 342

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
             C+ ++  L  +G +  A  +LQ+++                 G V P    ++ +IN 
Sbjct: 343 --CSILLNGLCKDGKVSIAEEVLQSLVNA---------------GLV-PTRVIYNTLING 384

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             + G+L+ A S F +M       +   YN LI+GLC + R+  + +LL EM+++G  PT
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++     R   +     ++ +M+  G +P V     ++   CK+GK  EA   L 
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM  +  LP+   Y+A I   ++    D A  L   + ++G  P +V YN++I GLC   
Sbjct: 505 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 564

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +++EAE++ N +    LIP   +YN LI+  C  GNID+A L L + + K      V TY
Sbjct: 565 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTY 623

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             LI GL  AGR ++   L+ +M +    P+      ++    K
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 236/525 (44%), Gaps = 28/525 (5%)

Query: 149 GEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           G++ +A  ++ RM  D     N  ++ V+I G  +  R   A+++FD+MT+     +   
Sbjct: 178 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 237

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIW 264
           Y+ +I G  K   LE   +L  +M   G+ P+   + +L   +      GE + L+ E+ 
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297

Query: 265 EDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
             +   D  T ++L + + R    NG      +L    +K       GV        T+ 
Sbjct: 298 SQKMVPDGFTYSILFDGLSR----NGDSKAMLSLFGKYLKN------GV--------TIG 339

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
             T S  I++N L KDGK+ +A  + + +   G +    +YN LI+G C +  LE ++  
Sbjct: 340 DYTCS--ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 397

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +M+    KP H T N++   LC+ + +  A +L+ +M+  G  P V+    LI    +
Sbjct: 398 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 457

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  + F  L++M + G  P++V Y + +       ++  A+ +  D+      P+   
Sbjct: 458 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 517

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN II    +     +A  L  +M + G+ PS+ TYNLLI G C    I +A   ++  L
Sbjct: 518 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS-L 576

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 PD ++Y TLI   C  G  D A+ L   M + G      T+  LI+GL    R 
Sbjct: 577 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 636

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 ++ M +  + P   +   ++ A+    N   A ++ KEM
Sbjct: 637 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 201/441 (45%), Gaps = 24/441 (5%)

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +  +G  PD    +K + +C   G+L   V                  ++R +  +G+  
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAV-----------------GMLRRMGRDGAPP 197

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                   +I G   A  G + + +F    +  V PN  +++ +I+  +K G L+    L
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +M   G   N   YN L+ GLC + R+ E+  LL EM      P  FT + +F  L R
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
             D    L+L  K    G        ++L+  LCK GK   A   L  +V  G +P  V 
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I G      ++ A   F  + +    PD + YN +I+GLCKA+R+  A+DL  EM 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGR 585
             G+ P+V T+N LI+ + ++G +++  + LS M  +E+G  P+V++Y ++++  C  G+
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM--QENGLKPNVVSYGSIVNAFCKNGK 495

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +A+ + ++M  K   PN   + A+I    +      A +    MK  G+ P +  +  
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI    ++     A E++  +
Sbjct: 556 LIKGLCNQSQISEAEEIINSL 576



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 170/362 (46%), Gaps = 2/362 (0%)

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNN 364
           ADV     ++      P+T +++  +   +  G L  A+ + R M + G    N F YN 
Sbjct: 146 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 205

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I G+  + R  ++ E+  EM E    P H T N+M     +  D+     L  +M   G
Sbjct: 206 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 265

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P      +L+  LC+ G+  E    L +M  +  +PD   YS    GL         L
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF     +G        +I+++GLCK  +V+ AE++   ++  GL+P+   YN LING+
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C++G ++ A     +M  +    PD ITY  LI+GLC A R  +A  L  EM++ G  P 
Sbjct: 386 CQTGELEGAFSTFGQMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             TF  LI    +  +     +    M+E G+KP++  + ++++AF      P A  +L 
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504

Query: 665 EM 666
           +M
Sbjct: 505 DM 506



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 232/533 (43%), Gaps = 21/533 (3%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQDYGWGYD 100
           + G + EA  +  ++ R+G   PN +SYN ++  + ++    D VE+   EM +     +
Sbjct: 176 AAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-FDEMTERAVLPN 234

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   ++  +   G  +    + ++++ HG     + +++LL    + G + +   L++
Sbjct: 235 HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 294

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  +  T+ +L  G  +       L LF K  K+G         +++ GLCK+ 
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCN 277
           ++ +A ++   +  +G+ P   I + LI      GEL        +   R +    +  N
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++  L     I  A +LL  M       D GV          +P   +F+ +I+   + 
Sbjct: 415 ALINGLCKAERITNAQDLLMEM------QDNGV----------NPTVETFNTLIDAYGRT 458

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+L+    +  EM + G   NV  Y ++++  C + ++ E+  +L +M      P     
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 518

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++            A  LV KM+  G  P +    LLIK LC   +  EA   +  +  
Sbjct: 519 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 578

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              +PD V Y+  I        +D AL+L + +  +G    V  Y+ +ISGL  A R+ E
Sbjct: 579 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNE 638

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            E L+ +M+   ++PS A +N+++  + K GN  +A      ML+K +   D 
Sbjct: 639 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 691


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 262/567 (46%), Gaps = 61/567 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+  C +G   +A+ +  E+       + V ++ L+    K  ++ +A  L+  M+   
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  T   L+ G  K  R+D+A++L + M K GF +D  +Y  +I G C N  L+   
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +L+ EM G GI+ +                             V T + L + + R+   
Sbjct: 124 ELFDEMLGKGISAN-----------------------------VVTYSCLVHGLCRL--- 151

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G   +A  +L AM      A+ G+           P+  ++  +I+ L KDG+   A+ 
Sbjct: 152 -GQWKEANTVLNAM------AEHGIH----------PDVVTYTGLIDGLCKDGRATHAMD 194

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L   M + G   +   YN L+ GLC    + +++++LR M E G K    T N++ + LC
Sbjct: 195 LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC 254

Query: 406 RRQDVVGALNLVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            +  V  AL L   M    +  EP V    +LI  LCK G+  +A +    MV++G   +
Sbjct: 255 DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGN 314

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y+  +GG +   ++  A+EL++ +   G  P+   Y+I+I G CK + +  A+ LF 
Sbjct: 315 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 374

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS----PDVITYTTLIDG 579
           EM T GL P++  YN L+   CK G+++QA     + L +E G+    PD+I++ T+IDG
Sbjct: 375 EMRTHGLNPALFDYNTLMASLCKEGSLEQA-----KSLFQEMGNANCEPDIISFNTMIDG 429

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
              AG       L  +M E G  P+ +TF  LI  L K      A      M   G  PD
Sbjct: 430 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 489

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
             V+ +L+    S+ +      +L +M
Sbjct: 490 ALVYDSLLKGLSSKGDTTEIINLLHQM 516



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 235/525 (44%), Gaps = 22/525 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA  L  ++ R+ +  P+  SYN L+  LCK+  +      L EM+  G   +  T
Sbjct: 12  GGVFEAMGLIREMGRKSVS-PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 70

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L+   C  G+ D+A+ +   +   G+  D  ++  L+  F   G +D+  EL + M 
Sbjct: 71  CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 130

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I  N  T+  L+HG  +  +  +A  + + M + G   D   Y  +I GLCK+ +  
Sbjct: 131 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 190

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNS 278
            A+ L + M   G  P     + L++    EG       +L   I + +  + +T   N+
Sbjct: 191 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTY--NT 248

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +M+ L   G +D+A  L  +M   E                + PN  +F+++I  L K+G
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNE--------------NCLEPNVFTFNMLIGGLCKEG 294

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +L  A+ + R+M + G   N+  YN L+ G   + +++E+ EL +++ + GF P  FT +
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +    C+ + +  A  L  +MR  G  P +     L+  LCK G   +A     +M   
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              PDI+ ++  I G +         EL   +   G  PD + ++ +I+ L K   + EA
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +     M+  G  P    Y+ L+ G    G+  + +  L +M  K
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 181/375 (48%), Gaps = 17/375 (4%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N +++ L  NG + +A  L++ M                 + +VSP+  S++ +IN L K
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREM----------------GRKSVSPDIVSYNTLINGLCK 45

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             KL  A+ L  EM   GC  N      L+DGLC   R++E+ ELL  M++ GF      
Sbjct: 46  AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 105

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++    C   ++     L  +M  +G    V   + L+  LC+ G+  EA   L  M 
Sbjct: 106 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  PD+V Y+  I GL    R   A++L   +   G  P  V YN+++SGLCK   V 
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTT 575
           +A  +   MI KG    V TYN L+ G C  G +D+A+   + M + E+   P+V T+  
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI GLC  GR   A+ +  +M +KG   N +T+  L+ G  K  + + A+  ++ + + G
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345

Query: 636 MKPDMFVFVALISAF 650
             P+ F +  LI  F
Sbjct: 346 FVPNSFTYSILIDGF 360



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 1/234 (0%)

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +++K LC++G   EA   + +M ++   PDIV Y+  I GL   K++  A+ L  ++ A
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            GC P+ V    ++ GLCK  R+ EA +L   M  KG    V  Y  LI+G+C +GN+D+
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
                  ML K   S +V+TY+ L+ GLC  G+  +A  + N M E G  P+ +T+  LI
Sbjct: 122 GKELFDEMLGKGI-SANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            GLCK  R   A+    +M EKG +P    +  L+S    E     AF++L+ M
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 164/357 (45%), Gaps = 17/357 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+N +YN LL  LCK   V      L+ M + G   D  T   L++  C+ G+ D+AL +
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265

Query: 124 FNEIIDH-GWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           FN + D+   ++ +VF+  +L+    K G + KA ++  +M       N  T+ +L+ G 
Sbjct: 266 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 325

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +K  ++ +A++L+ ++   GF  ++  Y ++I G CK + L +A  L+ EM+  G+ P  
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 385

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + L+ S   EG L        E  + N     C     I+  N  ID          
Sbjct: 386 FDYNTLMASLCKEGSLEQAKSLFQEMGNAN-----CEP--DIISFNTMIDGTLKAGDFQF 438

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E      ++M M+  G + P+  +F  +IN L K G+LD A S    M   G   +  
Sbjct: 439 VKE------LQMKMVEMG-LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDAL 491

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +Y++L+ GL +     E   LL +M   G       ++++  CLC     V  + L+
Sbjct: 492 VYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 274/580 (47%), Gaps = 29/580 (5%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDK 153
           +G+  +      LL  Y    Q D A+ + N++++ G +    + +  L A  +   + +
Sbjct: 156 FGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITE 215

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL  RM    +  +  T  +L+   +++ +  +AL++F +  + G   D+ +Y + + 
Sbjct: 216 AKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQ 275

Query: 214 GLCKNKQLEMALQLYSEMKGSGI-TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN-- 270
             CK   L MA  L  EMK   +  P  E  + +I +   +G +   ++  W+D  V+  
Sbjct: 276 ACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR--WKDEMVSDG 333

Query: 271 -TMTLLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
            +M ++   S++     N  +  A +L   M    P                SPN+ +F 
Sbjct: 334 ISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGP----------------SPNSVTFS 377

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I    K+G+++ AL  +++M  +G   +VF  + +I G     + EE+ +L  E  E+
Sbjct: 378 VLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 437

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAME 447
           G     F  N++   LC++  +  A  L+RKM  +G  P  V +N +++   C+      
Sbjct: 438 GLANV-FICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAH-CRKKNMDL 495

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A    ++M+++G  P+   YS  I G          LE+   + +     + V Y  II+
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIIN 555

Query: 508 GLCKAQRVAEAEDLFNEMIT-KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           GLCK  + ++A +L   MI  K    S  +YN +I+G+ K G +D A+     M      
Sbjct: 556 GLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMC-ANGI 614

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SP+VITYT+L+DGLC   R D A+ + +EM+ KG   +   + ALI G CK     +A  
Sbjct: 615 SPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASA 674

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F  + E+G+ P   V+ +LIS F +  N   A ++ K+M
Sbjct: 675 LFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKM 714



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 164/637 (25%), Positives = 283/637 (44%), Gaps = 58/637 (9%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N  L AL +  S+   +     M   G   D  T   L++      +  +AL VF+  I+
Sbjct: 201 NRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIE 260

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVD 187
            G   D  ++S+ + A  K   +  A  L+  M +  + + +++T+  +I   VK+  ++
Sbjct: 261 RGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNME 320

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            A++  D+M   G + +      +I G CKN  L  AL L+ +M+  G +P+    S LI
Sbjct: 321 DAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI 380

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
              S  GE+   + E ++              M  L    S+   + ++Q  +KG+    
Sbjct: 381 ERFSKNGEMEKAL-EFYKK-------------MESLGLTPSVFHVHTIIQGWLKGQKHE- 425

Query: 308 VGVEMLMIFKGTVSPNTSSF---DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
              E L +F  +     ++    + I++ L K GK+D A  L R+M   G   NV  YNN
Sbjct: 426 ---EALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           ++   C    ++ +  +   M E G KP ++T + +     +  D    L +V +M    
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLA 483
            E        +I  LCK G+  +A   L +M++E  F    + Y++ I G I    +D A
Sbjct: 543 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYA 602

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +  + ++CA+G  P+V+ Y  ++ GLCK  R+ +A ++ +EM  KG+   +  Y  LI+G
Sbjct: 603 VAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662

Query: 544 WCKSGNIDQAMLCLSRMLEK--ESGSP--------------------------------D 569
           +CK  N++ A    S +LE+      P                                D
Sbjct: 663 FCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 722

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           + TYTTLIDGL   G    A  L+ EM+  G  P+ I +  ++ GL K  +    +  F 
Sbjct: 723 LGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFE 782

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            MK+  + P++ ++ A+I+    E N   AF +  EM
Sbjct: 783 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 819



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 258/569 (45%), Gaps = 55/569 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           AN L  ++K + LCVP+  +Y  ++ A  K  +++       EM   G   +    T L+
Sbjct: 286 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLI 345

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
             +C +     AL +F ++ + G     V FS+L+  FSK GE++KA E  ++M+   + 
Sbjct: 346 TGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLT 405

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFD--------------------------------- 194
            +      +I G++K  + ++AL+LFD                                 
Sbjct: 406 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELL 465

Query: 195 -KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--- 250
            KM   G   +   Y+ ++   C+ K +++A  ++S M   G+ P+    S LI  C   
Sbjct: 466 RKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKN 525

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            DE  +  +V ++    ++    ++  +I+  L   G   +A  LL  MI+         
Sbjct: 526 HDEQNVLEVVNQM-TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE--------- 575

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +     +  S++ II+  +K+G++D A++ + EM   G   NV  Y +L+DGLC
Sbjct: 576 ------EKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLC 629

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +NR++++ E+  EM+  G K       ++    C++ ++  A  L  ++  +G  P   
Sbjct: 630 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQP 689

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI      G  + A      M+++G   D+  Y+  I GL+    + LA +L+ ++
Sbjct: 690 VYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM 749

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y +I++GL K  +  +   +F EM    + P+V  YN +I G  + GN+
Sbjct: 750 QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 809

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           D+A      ML+K    PD  T+  L+ G
Sbjct: 810 DEAFRLHDEMLDK-GILPDGATFDILVSG 837



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 198/469 (42%), Gaps = 94/469 (20%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  LFD+    GL   N +  N +L  LCK   +D     L++M+  G G +  +   
Sbjct: 425 EEALKLFDESFETGLA--NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  +C     D A +VF+ +++ G   + + +SIL+    K  +     E++ +M   N
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542

Query: 166 IRLN-----------------------------EKTFCV-------LIHGFVKKSRVDKA 189
           I +N                             EK FCV       +I GF+K+  +D A
Sbjct: 543 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYA 602

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           +  +++M  +G + +   Y  ++ GLCKN +++ AL++  EMK  G+  D      LI  
Sbjct: 603 VAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662

Query: 250 C---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
               S+    + L  E+ E+  +N    + NS++    + G++  A +L + M+K     
Sbjct: 663 FCKKSNMESASALFSELLEE-GLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 721

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D+G                ++  +I+ LLK+G L LA  L+ EM  +G + +  +Y  ++
Sbjct: 722 DLG----------------TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIV 765

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +GL    +  +  ++  EM+++   P     N++                     + GH 
Sbjct: 766 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV---------------------IAGH- 803

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                         + G   EAFR   +M+ +G LPD   +   + G +
Sbjct: 804 -------------YREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKV 839



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 112/252 (44%)

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           NLV   ++ G E   +    L+    K  +   A   +  M++ G +P +   +  +  L
Sbjct: 148 NLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSAL 207

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           +    +  A EL+  + A G   D     +++    + ++ AEA ++F+  I +G  P  
Sbjct: 208 VQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDS 267

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
             Y+L +   CK+ N+  A   L  M EK+   P   TYT++I      G  +DAI   +
Sbjct: 268 LLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKD 327

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           EM   G + N +   +LITG CK +   +AL  F  M+ +G  P+   F  LI  F    
Sbjct: 328 EMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNG 387

Query: 655 NPPLAFEVLKEM 666
               A E  K+M
Sbjct: 388 EMEKALEFYKKM 399


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 223/433 (51%), Gaps = 19/433 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+++   LCK    ++A Q++  MK  GI+P+  +L  L++S +++G+L      + +  
Sbjct: 106 YNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSY 165

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V    ++ NS++  LV    ++ A  L +  ++ +   D                T +F
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCND----------------TKTF 209

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I  L   GK + A+ L   M+  GC+ ++  YN LI G C SN L+++ E+  +++ 
Sbjct: 210 NILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKS 269

Query: 388 S-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           S G  P   T  SM    C+   +  A  L+  M   G  P      +L+    K G+  
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMH 329

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      M+  G  PD+V +++ I G   + +V+    L+ ++ A G  P+   Y+I+I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILI 389

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + LCK  R+ +A +L  ++ +K +IP    YN +I+G+CK+G +++A++ +  M EK+  
Sbjct: 390 NALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEM-EKKKC 448

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD IT+T LI G C+ GR  +A+ ++++M   GC+P++IT  +L++ L K    + A  
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY- 507

Query: 627 HFRMMKEKGMKPD 639
           H   +  KG   D
Sbjct: 508 HLNQIAHKGQIND 520



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 172/353 (48%), Gaps = 6/353 (1%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           FK  +  +  +++++  +L K G  DLA  +F  M   G   N  L   L+       +L
Sbjct: 95  FKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKL 154

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK-MRVQGHEPWVKHNTL 434
             +  LL +  E   +     +NS+   L +   V  A+ L  + +R Q        N +
Sbjct: 155 HCATALLLQSYE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFN-I 211

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAH 493
           LI+ LC  GKA +A   L  M   G LPDIV Y+  I G      +  A E+F D+  + 
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS 271

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PDVV Y  +ISG CKA ++ EA  L ++M+  G+ P+  T+N+L++G+ K+G +  A
Sbjct: 272 GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTA 331

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                +M+      PDV+T+T+LIDG C  G+ +    LW EM  +G  PN  T+  LI 
Sbjct: 332 EEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LCK +R   A      +  K + P  F++  +I  F        A  +++EM
Sbjct: 391 ALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEM 443



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 204/470 (43%), Gaps = 60/470 (12%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YN L  +LCK+   DL     + M+  G   +   L  L+  +   G+   A ++  +
Sbjct: 104 WTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQ 163

Query: 127 IID-HGWVDEHVFSILLVAFSKWGEVDKACELIE---RMDDCNIRLNEKTFCVLIHGFVK 182
             +  G     V + LL    K   V+ A +L E   R   CN   + KTF +LI G   
Sbjct: 164 SYEVEGCC--MVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCN---DTKTFNILIRGLCG 218

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFE 241
             + +KA++L   M+  G   D   Y+ +I G CK+ +L+ A +++ ++K  SG +PD  
Sbjct: 219 VGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVV 278

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + +I+                           C +        G + +A  LL  M++
Sbjct: 279 TYTSMISG-------------------------YCKA--------GKMQEASVLLDDMLR 305

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                      L I+     P   +F+++++   K G++  A  +  +M   GC  +V  
Sbjct: 306 -----------LGIY-----PTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVT 349

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           + +LIDG C   ++ + + L  EM   G  P  FT + +   LC+   ++ A  L+ ++ 
Sbjct: 350 FTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLA 409

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P       +I   CK GK  EA   + +M ++   PD + ++  I G     R+ 
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            A+ +F  + A GC PD +  + ++S L KA    EA  L N++  KG I
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIAHKGQI 518



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 153/351 (43%), Gaps = 23/351 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +  VE+A  LF++  R   C  +  ++N L+  LC     +     L  M  +
Sbjct: 177 LLNTLVKLDRVEDAMKLFEEHLRFQSC-NDTKTFNILIRGLCGVGKAEKAVELLGGMSGF 235

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G   D  T   L++ +C S +  KA  +F+++         V  ++ ++  + K G++ +
Sbjct: 236 GCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 295

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M    I     TF VL+ G+ K   +  A ++  KM   G   D   +  +I 
Sbjct: 296 ASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WEDRDVN 270
           G C+  Q+    +L+ EM   G+ P+    S LI +   E  L L  +E+      +D+ 
Sbjct: 356 GYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRL-LKARELLGQLASKDII 414

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
               + N ++      G +++A  +++ M K +                  P+  +F I+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKK----------------CKPDKITFTIL 458

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           I      G++  A+S+F +M  IGC  +    ++L+  L  +   +E+Y L
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 246/527 (46%), Gaps = 52/527 (9%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKW 148
           ++      G+    +  +    C SG + ++L +   ++  G+  + +  + L+  F   
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             + KA  ++E ++    + +   +  LI+GF K +R+D A ++ D+M    F+ D   Y
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +++IG LC   +L++AL+               +L++L+   SD  + T++         
Sbjct: 197 NIMIGSLCSRGKLDLALK---------------VLNQLL---SDNCQPTVI--------- 229

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
             T T+L  + M      G +D+A  L+  M+                +G + P+  +++
Sbjct: 230 --TYTILIEATML----EGGVDEALKLMDEMLS---------------RG-LKPDMFTYN 267

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II  + K+G +D A  + R +   GC  +V  YN L+  L N  + EE  +L+ +M   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T + +   LCR   +  A+NL++ M+ +G  P       LI   C+ G+   A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             FL  M+ +G LPDIV Y+  +  L    + D ALE+F  +   GC P+  +YN + S 
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L  +     A  +  EM++ G+ P   TYN +I+  C+ G +D+A   L  M   E   P
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF-HP 506

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            V+TY  ++ G C A R +DAI +   M   GC PN  T+  LI G+
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 209/474 (44%), Gaps = 51/474 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     + KA+++ + + K G   D   Y+ +I G CK  +++ A ++   M+   
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD                                 T+  N ++  L S G +D A  +
Sbjct: 189 FSPD---------------------------------TVTYNIMIGSLCSRGKLDLALKV 215

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  ++                     P   ++ I+I   + +G +D AL L  EM   G 
Sbjct: 216 LNQLLSD----------------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN +I G+C    ++ ++E++R +E  G +P   + N + R L  +        
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ KM  +  +P V   ++LI  LC+ GK  EA   L  M ++G  PD   Y   I    
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+D+A+E    + + GC PD+V YN +++ LCK  +  +A ++F ++   G  P+ +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN + +    SG+  +A+  +  M+      PD ITY ++I  LC  G  D+A  L  +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           M      P+ +T+  ++ G CK  R   A+     M   G +P+   +  LI  
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 222/474 (46%), Gaps = 60/474 (12%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E    P+ ++YN L+   CK   +D     L  M+   +  D  T   ++   C+ G+ D
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            AL V N+++                                 D+C   +   T+ +LI 
Sbjct: 211 LALKVLNQLLS--------------------------------DNCQPTV--ITYTILIE 236

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
             + +  VD+AL+L D+M   G   D   Y+ II G+CK   ++ A ++   ++  G  P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296

Query: 239 D---FEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           D   + IL + + +    +EGE  L+ K   E  D N +T   + ++  L  +G I++A 
Sbjct: 297 DVISYNILLRALLNQGKWEEGE-KLMTKMFSEKCDPNVVTY--SILITTLCRDGKIEEAM 353

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           NLL+               LM  KG ++P+  S+D +I    ++G+LD+A+     M   
Sbjct: 354 NLLK---------------LMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC+ ++  YN ++  LC + + +++ E+  ++ E G  P   + N+MF  L    D + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 414 LNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           L+++ +M   G +P  + +N++ I  LC+ G   EAF  L DM    F P +V Y+  + 
Sbjct: 458 LHMILEMMSNGIDPDEITYNSM-ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           G     R++ A+ +   +  +GC P+   Y ++I G+  A   AEA +L N+++
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 193/404 (47%), Gaps = 20/404 (4%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C++     +L L   M   G  PD  + +KLI     +G  TL        R++      
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLI-----KGFFTL--------RNIPKAV-- 144

Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              +M IL   G  D  AYN L+    K   I D    +  +     SP+T +++I+I +
Sbjct: 145 --RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLDLAL +  ++    C   V  Y  LI+       ++E+ +L+ EM   G KP 
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            FT N++ R +C+   V  A  +VR + ++G EP V    +L++ L   GK  E  + +T
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M  E   P++V YS  I  L    +++ A+ L + +   G  PD  +Y+ +I+  C+  
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+  A +    MI+ G +P +  YN ++   CK+G  DQA+    ++ E    SP+  +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSY 441

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            T+   L  +G    A+ +  EM   G  P+ IT+ ++I+ LC+
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 22/436 (5%)

Query: 27  FMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           F  P    +  LI     +  +++A  + D+++ +    P+  +YN ++ +LC    +DL
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTVTYNIMIGSLCSRGKLDL 211

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLV 143
               L ++          T T L++     G  D+AL + +E++  G   D   ++ ++ 
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              K G VD+A E++  ++      +  ++ +L+   + + + ++  +L  KM       
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK-- 261
           +   Y ++I  LC++ ++E A+ L   MK  G+TPD      LI +   EG L + ++  
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E           +  N+++  L  NG  DQA  +   +       +VG           S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL------GEVGC----------S 435

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN+SS++ + + L   G    AL +  EM   G   +   YN++I  LC    ++E++EL
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M    F P+  T N +    C+   +  A+N++  M   G  P     T+LI+ +  
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555

Query: 442 HGKAMEAFRFLTDMVQ 457
            G   EA     D+V+
Sbjct: 556 AGYRAEAMELANDLVR 571


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/608 (25%), Positives = 276/608 (45%), Gaps = 29/608 (4%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           NN +Y+ LL+ + K      +E+ L++M++  +      L  ++ VY   G  DKA+ +F
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 125 NEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERM------DDCNIRLNEKTFCVL 176
             + +       V +   LL    K G+VD ACEL ++M         ++ ++  +  ++
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           + G     +V++  +L D    +G   +   Y+VII G CK   L+ A +++ E+K  G 
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDV---NTMTLLCNSIMRILVSNGSIDQAY 293
            P  E    LI      G+  + V ++  + +V   N    + NSI+      G +D+A 
Sbjct: 272 LPTLETYGALIDGFCKAGKFQV-VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +++ M       ++G E          P+ ++++I+IN     G++  A        + 
Sbjct: 331 EMMRMM------TEMGCE----------PDITTYNILINFSCSGGRIKEAEEFLERAKER 374

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
             + N F Y  L+   C       + ++L ++ E+G KP   +  +         ++  A
Sbjct: 375 TLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVA 434

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L +  KM  +G  P  +   +L+  LCK G+   A   L++M+     PD   Y+  + G
Sbjct: 435 LMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDG 494

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            I    +D A ELF  + + G  P VV YN++I GLCK  ++ +A    N+M      P 
Sbjct: 495 FIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPD 554

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             T++ +I+G+ K  ++D A+    +M+ K+   P+V+ YT+LI+G C       A  ++
Sbjct: 555 EYTHSTVIDGYVKQHDLDSALKMFGQMM-KQKYKPNVVAYTSLINGFCKIADMSRAEKVF 613

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             M+     PN +T+  LI G  K  +P  A   F +M      P+   F  LI+   + 
Sbjct: 614 RAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNI 673

Query: 654 LNPPLAFE 661
            N  L  E
Sbjct: 674 TNTTLLIE 681



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 149/623 (23%), Positives = 272/623 (43%), Gaps = 49/623 (7%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL-----CVPNNYSYNCLLEALCKSC 80
           CF    A   L+ CL   G V+ A  L+D++   G       V +NYS   +++ LC   
Sbjct: 160 CFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVG 219

Query: 81  SVDLVEMRLKEMQDYGWGY----DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE- 135
            V+      +++ D  WG     +      ++  YC  G   +A  VF E+   G++   
Sbjct: 220 KVE----EGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTL 275

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             +  L+  F K G+     +L+  M+   + +N K F  +I    K   VDKA ++   
Sbjct: 276 ETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRM 335

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           MT+ G   D   Y+++I   C   +++ A +     K   + P+    + L+ +   +G+
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGD 395

Query: 256 LTLLVKEIWEDRDVNTMTLLCN--SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             +    +++  +      L +  + +   V+ G ID A  + + M++            
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMME------------ 443

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              KG V P+   ++++++ L K G+   A  L  EM  +    + ++Y  L+DG   +N
Sbjct: 444 ---KG-VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNN 499

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            L+++ EL   +   G  P     N M + LC+   +  A++ V KM++  H P    ++
Sbjct: 500 ELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHS 559

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I    K      A +    M+++ + P++V Y++ I G   I  +  A ++FR + + 
Sbjct: 560 TVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSF 619

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P+VV Y I+I G  K  +  +A   F  M+    +P+  T++ LING     NI   
Sbjct: 620 NLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLT---NITNT 676

Query: 554 MLCLSRMLEK--------------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
            L + +  E               E  S  + TY ++I  LC  G  D A +L  +M  K
Sbjct: 677 TLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRK 736

Query: 600 GCAPNRITFMALITGLCKCDRPR 622
           G   + + F AL+ GLC+  + +
Sbjct: 737 GFLMDSVCFSALLHGLCQTGKSK 759



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 132/596 (22%), Positives = 238/596 (39%), Gaps = 70/596 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++ L  VG VEE   L D     G CVPN   YN +++  CK   +       +E++  
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNG-CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLK 269

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G+     T   L+  +C +G+F     + NE+   G  V+  VF+ ++ A  K+G VDKA
Sbjct: 270 GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E++  M +     +  T+ +LI+      R+ +A +  ++  +     +   Y  ++  
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
            CK     MA  +  ++  +G  PD       I      GE+   L+V+E   ++ V   
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIA----------------DVGVEML- 313
             + N +M  L   G    A  LL  M+    +P A                D   E+  
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           ++    + P    ++++I  L K GK+  A+S   +M       + + ++ +IDG    +
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            L+ + ++  +M +  +KP      S+    C+  D+  A  + R M+    EP V   T
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE-------- 485
           +LI    K GK  +A  F   M+    LP+   +   I GL +I    L +E        
Sbjct: 630 ILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRS 689

Query: 486 LFRD-----------------------ICAHGCCP----------------DVVAYNIII 506
           L  D                       +C HG                   D V ++ ++
Sbjct: 690 LILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            GLC+  +  E  ++ +  +TK    +   Y+L ++ +   G   +A   L  ++E
Sbjct: 750 HGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNLIE 805


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 236/504 (46%), Gaps = 49/504 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L  +  +G   +  S+F+ I   D+  V+  +  +L++A++     +   E  +R    
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
             +L+  +   L+   +K++R      L+ +M +     +   ++V+I  LCK  ++  A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             +  +MK  G +P+    + LI      G                              
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLG------------------------------ 272

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG + +A  +L+ M++ E                VSPN ++F+I+I+   KD  L  +L
Sbjct: 273 GNGKMYKADAVLKEMVENE----------------VSPNLTTFNILIDGFWKDDNLPGSL 316

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F+EM     + NV  YN+LI+GLCN  ++ E+  +  +M  +G +P   T +S+    
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGF 376

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  AL++   ++ QG  P  +   +LI   CK GK  + F    +M +EG +PD+
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  I GL     ++ A +LF  +   G  PD+V ++I++ G C      +A  L  E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   GL P   TYN+++ G+CK GN+  A    ++M ++     +V +Y  L+ G    G
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
           + +DA ML NEM EKG  PNRIT+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITY 579



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 6/360 (1%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+ A++K    ADV      + +  + PN  +F+++IN L K GK++ A  +  +M   G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 355 CMQNVFLYNNLIDGLCN---SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
              NV  YN LIDG C    + ++ ++  +L+EM E+   P   T N +     +  ++ 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           G+L + ++M  Q   P V     LI  LC  GK  EA      MV  G  P+++ Y + I
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      +  AL++F  +   G  P    YN++I   CK  ++ +   L  EM  +G++
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V TYN LI G C++GNI+ A     ++  K  G PD++T+  L++G C  G    A M
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK--GLPDLVTFHILMEGYCSRGESRKAAM 491

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAF 650
           L  EM + G  P  +T+  ++ G CK    +AA  +  +M KE+ ++ ++  +  L+  +
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 20/392 (5%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           S +   V NGS  Q +++  A+     + D            V  N+   D+++     +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAI----SMCD-----------NVCVNSIIADMLVLAYANN 166

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            + +L    F+     G   +      L+  L   NR  +   L +EM     +P  FT 
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTF 226

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTD 454
           N +   LC+   +  A +++  M+V G+ P V     LI   CK   +GK  +A   L +
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+    P++  ++  I G      +  +L++F+++      P+V+ YN +I+GLC   +
Sbjct: 287 MVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGK 346

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA  + ++M++ G+ P++ TY+ LING+CK+G + +A L +   ++ +   P    Y 
Sbjct: 347 INEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEA-LDMFDSVKGQGTRPTTRMYN 405

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LID  C  G+ DD   L  EME +G  P+  T+  LI GLC+     AA   F  +  K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+ PD+  F  L+  + S      A  +LKEM
Sbjct: 466 GL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 198/441 (44%), Gaps = 24/441 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  Y N+ +F+     F     +G+ +       L+VA  K         L + M    
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK---NKQLE 222
           I+ N  TF V+I+   K  +++KA  + + M   G++ +   Y+ +I G CK   N ++ 
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A  +  EM  + ++P+    + LI     +  L   +K   E  D+DV    +  NS++
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L + G I++A               +G+   M+  G V PN  ++  +IN   K+G +
Sbjct: 339 NGLCNGGKINEA---------------IGMRDKMVSAG-VQPNLITYHSLINGFCKNGMM 382

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             AL +F  +   G      +YN LID  C   ++++ + L  EME  G  P   T N +
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LCR  ++  A  L  ++  +G    V  + +L++  C  G++ +A   L +M + G 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFH-ILMEGYCSRGESRKAAMLLKEMSKMGL 501

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP-DVVAYNIIISGLCKAQRVAEAE 519
            P  + Y+  + G      +  A  +   +        +V +YN+++ G  +  ++ +A 
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 520 DLFNEMITKGLIPSVATYNLL 540
            L NEM+ KGL+P+  TY ++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIV 582



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 189/425 (44%), Gaps = 74/425 (17%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN---SGQFDKA 120
           PN +++N ++ ALCK+  ++     +++M+ YG+  +  +   L+  YC    +G+  KA
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 121 LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +V  E++++        F+IL+  F K   +  + ++ + M D ++  N  T+  LI+G
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                ++++A+ + DKM  +G   +   Y  +I G CKN  ++ AL ++  +KG G  P 
Sbjct: 341 LCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRP- 399

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                            T + N ++      G ID  + L + M
Sbjct: 400 --------------------------------TTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            +   + DVG                +++ +I  L ++G ++ A  LF ++T  G + ++
Sbjct: 428 EREGIVPDVG----------------TYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDL 470

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             ++ L++G C+     ++  LL+EM + G KP H T N M +  C+  ++  A N+  +
Sbjct: 471 VTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQ 530

Query: 420 MR---------------VQGHEPWVK--HNTLLIKELCKHGKAMEAFRF---LTDMVQEG 459
           M                +QG+    K     +L+ E+ + G       +     +MV +G
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590

Query: 460 FLPDI 464
           F+PDI
Sbjct: 591 FVPDI 595



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 24/296 (8%)

Query: 63  VPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           +PN  +YN L+  LC    ++  + MR K M   G   +  T   L+  +C +G   +AL
Sbjct: 328 IPNVITYNSLINGLCNGGKINEAIGMRDK-MVSAGVQPNLITYHSLINGFCKNGMMKEAL 386

Query: 122 SVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F+ +   G      ++++L+ A+ K G++D    L E M+   I  +  T+  LI G 
Sbjct: 387 DMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +   ++ A +LFD++T  G   D   + +++ G C   +   A  L  EM   G+ P  
Sbjct: 447 CRNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRH 505

Query: 241 EILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              + ++     EG L   T +  ++ ++R +       N +++     G ++ A  LL 
Sbjct: 506 LTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL-DLALSLFREMTQ 352
            M++               KG V PN  +++I+   ++  G + D+   LF   T+
Sbjct: 566 EMLE---------------KGLV-PNRITYEIVKEEMVDKGFVPDIEGHLFNVSTK 605



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 104/208 (50%), Gaps = 20/208 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +G +++   L ++++REG+ VP+  +YNCL+  LC++ +++  +    ++ + 
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGI-VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   L++ YC+ G+  KA  +  E+   G    H+ ++I++  + K G +  A
Sbjct: 466 GLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAA 524

Query: 155 CELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             +  +M+ +  +R+N  ++ VL+ G+ +K +++ A  L ++M + G   +   Y+++  
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-- 582

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFE 241
                           EM   G  PD E
Sbjct: 583 --------------KEEMVDKGFVPDIE 596



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 5/172 (2%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    LI  L   G +E A  LFDQ+  +GL  P+  +++ L+E  C         M LK
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL--PDLVTFHILMEGYCSRGESRKAAMLLK 494

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKW 148
           EM   G      T   +++ YC  G    A ++  ++     +  +V  +++LL  +S+ 
Sbjct: 495 EMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV-DKALQLFDKMTKS 199
           G+++ A  L+  M +  +  N  T+ ++    V K  V D    LF+  TKS
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLFNVSTKS 606


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 256/573 (44%), Gaps = 59/573 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A+ LF ++   GL  PN  +Y  L+ ALCK   ++       +M+D G     Y    
Sbjct: 355 DDADRLFKEMAGRGL-EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC  G  D+A  + + ++  G       +S L+    + G++  A EL   M +  
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG 473

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI+GF K  ++D+A +LFDKM  S    +   ++V+I G C    +  A 
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           QLY +M   G+ PD      LI+                          LC       ++
Sbjct: 534 QLYDQMVEMGLKPDNYTYRSLISG-------------------------LC-------LT 561

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +G + +A          E +AD+     ++       N  S   ++  L ++G+      
Sbjct: 562 SG-VSKA---------NEFVADLENSYAVL-------NNFSLTALLYGLFREGRFTETYH 604

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+ EM   G   ++  +  ++      +  E+S  L REM+E G KP       M   L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + ++++ ALN   +M + G+ P    +T+LI  LCK G    A     +M+    LP+  
Sbjct: 665 KEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICA---HGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            Y+      +D    +  +E  +D+ +    G    +V++NI+I GLCKA ++ EA DL 
Sbjct: 725 TYNC----FLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            ++   G  P   +Y+ +I+  CK G+I++A    + ML K    PDV+ Y   I    +
Sbjct: 781 RKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPDVVAYNIFIRWCNV 839

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            G  D A+ ++  M   G  PN  T+ AL++G+
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 243/558 (43%), Gaps = 85/558 (15%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+++  S +L +  K  +   A +L ++M    + L+E  +   I  + +   +D A  L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M   G  + A  Y+V++ GLCKN +++ A+++ + M   G+T D      L+     
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             EL + ++ I  D                                              
Sbjct: 281 MEELEMALR-ITHD---------------------------------------------- 293

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            MI  G V P+ ++   +I+ L K   ++ A SL  ++  +G + NVF YN LID LC +
Sbjct: 294 -MIRLGFV-PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R +++  L +EM   G +P   T   +   LC+R  +  AL L  KMR +G +  V   
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI   CK G    A   L+ MV+EG  P    YS  I GL     +  A+EL R++  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   +   +  +I+G CK +++ EA  LF++MI   +IP+  T+N++I G+C  GNI +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIA----------------------------- 583
           A     +M+E     PD  TY +LI GLC+                              
Sbjct: 532 AFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590

Query: 584 ------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 GR  +   LW+EM  +G   + ++F  ++    K      + V FR MKE+G+K
Sbjct: 591 YGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650

Query: 638 PDMFVFVALISAFLSELN 655
           PD   +  +I A   E N
Sbjct: 651 PDDIFYTCMIDALSKEEN 668



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 280/632 (44%), Gaps = 88/632 (13%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +  D+++     S     F+I  L    LVEEA  L  ++   G+ VPN ++YN L++ L
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM-VPNVFAYNALIDKL 348

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           CK+                                    +FD A  +F E+   G   +E
Sbjct: 349 CKN-----------------------------------ERFDDADRLFKEMAGRGLEPNE 373

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++IL+ A  K G ++ A  L ++M D  I++    +  LI+G+ K+  +D+A  L   
Sbjct: 374 VTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K G    AA Y  +I GLC+N  L  A++L+ EM   GI                   
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA------------------ 475

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                   W +    T T L N   +    +  +D+A  L   MI    I          
Sbjct: 476 --------WNNY---TFTALINGFCK----DKKMDEAARLFDKMIDSNVI---------- 510

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 PN  +F+++I      G +  A  L+ +M ++G   + + Y +LI GLC ++ +
Sbjct: 511 ------PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++ E + ++E S     +F+L ++   L R        +L  +M V+G +  +   T++
Sbjct: 565 SKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTII 624

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +    K     ++     +M ++G  PD + Y+  I  L   + +  AL  +  +   G 
Sbjct: 625 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGY 684

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V + ++I+ LCK+  +  AE L  EM+   ++P+  TYN  ++ +   G++++A  
Sbjct: 685 SPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD 744

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             S ML+    S  ++++  LI GLC AG+  +AI L  ++ E G +P+ I++  +I  L
Sbjct: 745 LHSAMLQGHLAS--IVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           CK      A   +  M  KG+KPD+  +   I
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 268/601 (44%), Gaps = 65/601 (10%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   ++YT + +L       QF  A  +F++++  G  +DE+V++  + A+ +   +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM+   ++ +   + VL++G  K  RV +A+++ + M   G  +D   Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRD 268
            C+ ++LEMAL++  +M   G  P     S +I    DE     LV+E +       D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMI----DELRKKELVEEAFSLACKLGDLG 333

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +       N+++  L  N   D A  L + M      A  G+E          PN  ++ 
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEM------AGRGLE----------PNEVTYA 377

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K G ++ AL LF +M   G    V+ YN+LI+G C    L+ +  LL  M + 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAME 447
           G  PT  + + +   LCR  D+  A+ L R+M  +G   W  +  T LI   CK  K  E
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG-IAWNNYTFTALINGFCKDKKMDE 496

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    M+    +P+ V ++  I G   +  +  A +L+  +   G  PD   Y  +IS
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLC-----------------------------------KAQRVAEAEDLFNEMITKGLIP 532
           GLC                                   +  R  E   L++EM  +G+  
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL 616

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +++    K  + +++ + L R ++++   PD I YT +ID L        A+  
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCV-LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W++M   G +PN +T   LI  LCK     +A +  + M    + P+ F +   +  F +
Sbjct: 676 WDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 653 E 653
           E
Sbjct: 736 E 736


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 269/590 (45%), Gaps = 54/590 (9%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
           YT   L+  Y  + + D  L VF  ++  G   D   ++ L+  FSK GEVDKA +L  +
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++  I  N  T+  LI+G  K   +DKA ++  +M  +G   +   Y+ +I G   +  
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-NTMTLLCNSI 279
            + +++++ EM  S + PD    +  +T+    G        I E RD+ ++M L     
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG-------RIKEARDIFDSMVL--KGP 289

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
              ++S G++   Y     +   + + +V     M+ +G V P+   F+ +IN   + G 
Sbjct: 290 KPDVISYGALLHGYATAGCIAGMDNLFNV-----MVCEGVV-PDRHVFNTLINAYARLGM 343

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D +L +F +MT+ G   ++  ++ +I   C   RL+++ E    M ++G  P     + 
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAM------------ 446
           + +  C R+D+V A  L+  M  +G   P +K  T +I  LCK G+              
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463

Query: 447 -----------------------EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
                                  EA   L  M   G  PDI  Y+  + G     R+D A
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L LFRD+         V+YNII+ GL +A+R   A+++F+EMI  G+  S+ TY  ++ G
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 583

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C++   D+A + L ++        D++T+  +I  +   GR  +A  L+  +   G  P
Sbjct: 584 LCRNNCTDEANMLLEKLFSMNVKF-DILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 642

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             +T+  +IT L K +    A   F  M++    PD  +   +I   L++
Sbjct: 643 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 259/611 (42%), Gaps = 101/611 (16%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++IL+  + +    D    +  R+    +  +  ++  LI GF K+  VDKA  LF K
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           M + G   +   Y  +I GLCK K+++ A ++  +M G+G+ P+    + LI   S  G 
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238

Query: 255 --ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV- 308
             E   + KE+       DV      CNS M  L  +G I +A ++  +M+   P  DV 
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGN----CNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 309 ----------------GVEML---MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                           G++ L   M+ +G V P+   F+ +IN   + G +D +L +F +
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVV-PDRHVFNTLINAYARLGMMDKSLLMFED 353

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           MT+ G   ++  ++ +I   C   RL+++ E    M ++G  P     + + +  C R+D
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413

Query: 410 VVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAME--------------------- 447
           +V A  L+  M  +G   P +K  T +I  LCK G+  E                     
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473

Query: 448 --------------AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
                         A   L  M   G  PDI  Y+  + G     R+D AL LFRD+   
Sbjct: 474 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 533

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
                 V+YNII+ GL +A+R   A+++F+EMI  G+  S+ TY  ++ G C++   D+A
Sbjct: 534 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 593

Query: 554 MLCLSRML-----------------------EKESGS-----------PDVITYTTLIDG 579
            + L ++                         +E+             P ++TY  +I  
Sbjct: 594 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 653

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L      +DA  L++ ME+  C P+      +I  L        A  +   + +KG+ P+
Sbjct: 654 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 713

Query: 640 MFVFVALISAF 650
                 LI  F
Sbjct: 714 ATTTSLLIYLF 724



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 263/593 (44%), Gaps = 22/593 (3%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R  + P    +  LI      G V++A+ LF +++ +G+ +PN  +Y+ L+  LCK+  +
Sbjct: 146 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEM 204

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
           D  E  L++M   G   +  T   L+  Y  SG + +++ VF E+     V D    +  
Sbjct: 205 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 264

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           + A  K G + +A ++ + M     + +  ++  L+HG+     +     LF+ M   G 
Sbjct: 265 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 324

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D  +++ +I    +   ++ +L ++ +M   G+ PD    S +I++    G L   ++
Sbjct: 325 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 384

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           +     D  V   T + + +++   +   + +A  L+  M+                KG 
Sbjct: 385 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS---------------KGI 429

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P    F  IIN L K+G++     +   +   G   N+  +N+L+DG C    ++E+ 
Sbjct: 430 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV 489

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  ME  G +P  +T N++    C+   +  AL L R M  +          +++  L
Sbjct: 490 GLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 549

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            +  + + A     +M++ G    I  Y+  +GGL      D A  L   + +     D+
Sbjct: 550 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 609

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + +NI+I  + K  R  EA++LF  + T GL+P++ TY ++I    K  + + A    S 
Sbjct: 610 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 669

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           M EK S +PD      +I  L   G    A    +++++KG  P   T   LI
Sbjct: 670 M-EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 178/367 (48%), Gaps = 19/367 (5%)

Query: 295 LLQAMIKGEPIA---DVGVEMLMIFK-------GTVSPNTSSFDIIINTLLKDGKLDLAL 344
           LL A+ +  P A   DV    + +FK          +P   +++I+IN   +  + DL L
Sbjct: 79  LLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGL 138

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F  + + G   +VF YN LIDG      ++++++L  +MEE G  P   T +S+   L
Sbjct: 139 PVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGL 198

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ +++  A  ++R+M   G  P       LI      G   E+ R   +M     +PD+
Sbjct: 199 CKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDV 258

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
              ++ +  L    R+  A ++F  +   G  PDV++Y  ++ G   A  +A  ++LFN 
Sbjct: 259 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNV 318

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ +G++P    +N LIN + + G +D+++L    M  K+  +PD+IT++T+I   C  G
Sbjct: 319 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM-TKQGVNPDIITFSTVISAFCRLG 377

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM----MKEKGMKPDM 640
           R DDA+  +N M + G  P+   +  LI G C     R  LV  +     M  KG+ P  
Sbjct: 378 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN----RRDLVKAKELISDMLSKGIPPPC 433

Query: 641 FVFVALI 647
             F   I
Sbjct: 434 IKFFTSI 440



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 238/562 (42%), Gaps = 53/562 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    + G+ +E+  +F ++    L VP+  + N  + ALCK   +         M   
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMS-SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 287

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  +   LL  Y  +G      ++FN ++  G V D HVF+ L+ A+++ G +DK+
Sbjct: 288 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 347

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M    +  +  TF  +I  F +  R+D A++ F+ M  +G   D A+Y  +I G
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD-FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            C  + L  A +L S+M   GI P   +  + +I +   EG        + E +DV    
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR-------VAEGKDV---- 456

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                          +D                      L+I  G   PN  +F+ +++ 
Sbjct: 457 ---------------VD----------------------LIIHTGQ-RPNLITFNSLVDG 478

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               G +  A+ L   M  +G   +++ YN L+DG C   R++++  L R+M       T
Sbjct: 479 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 538

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             + N +   L + +  + A  +  +M   G    +     ++  LC++    EA   L 
Sbjct: 539 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 598

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +       DI+ ++  I  +  + R   A ELF  I  +G  P ++ Y ++I+ L K +
Sbjct: 599 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 658

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
              +A++LF+ M      P     N +I      G + +A   LS+ ++K+   P+  T 
Sbjct: 659 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK-IDKKGILPEATTT 717

Query: 574 TTLIDGLCIAGRPDDAIMLWNE 595
           + LI    + G+  + I L  E
Sbjct: 718 SLLIYLFSVNGKYREYIKLLPE 739



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 16/334 (4%)

Query: 342 LALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           LA+ LF+ M +  C +    ++ YN LI+    + R +    +   +  +G  P  F+ N
Sbjct: 98  LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYN 157

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++     +  +V  A +L  KM  QG  P V   + LI  LCK  +  +A R L  MV  
Sbjct: 158 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 217

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+ + Y+  I G         ++ +F+++ +    PDV   N  ++ LCK  R+ EA
Sbjct: 218 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 277

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSG------NIDQAMLCLSRMLEKESGSPDVIT 572
            D+F+ M+ KG  P V +Y  L++G+  +G      N+   M+C       E   PD   
Sbjct: 278 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC-------EGVVPDRHV 330

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           + TLI+     G  D +++++ +M ++G  P+ ITF  +I+  C+  R   A+  F  M 
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + G+ PD  V+  LI    +  +   A E++ +M
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDM 424



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 195/481 (40%), Gaps = 62/481 (12%)

Query: 18  AQDVVKSRCFMSPG----ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           A+D+  S     P     + G L+    + G +   + LF+ +  EG+ VP+ + +N L+
Sbjct: 277 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV-VPDRHVFNTLI 335

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW- 132
            A  +   +D   +  ++M   G   D  T + ++  +C  G+ D A+  FN +ID G  
Sbjct: 336 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 395

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNI-------------------------- 166
            D  V+S L+       ++ KA ELI  M    I                          
Sbjct: 396 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 455

Query: 167 ----------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                     R N  TF  L+ G+     + +A+ L D M   G   D   Y+ ++ G C
Sbjct: 456 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 515

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K+ +++ AL L+ +M    +T    +   +I     +   T++ KE++ +   + M +  
Sbjct: 516 KHGRIDDALTLFRDMLHKRVTLT-SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 574

Query: 277 NSIMRI---LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++   +   L  N   D+A  LL+ +                F   V  +  +F+I+I  
Sbjct: 575 HTYATVLGGLCRNNCTDEANMLLEKL----------------FSMNVKFDILTFNIVIRA 618

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           + K G+   A  LF  ++  G +  +  Y  +I  L      E++  L   ME+S   P 
Sbjct: 619 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
              LN + R L  + +V  A N + K+  +G  P     +LLI     +GK  E  + L 
Sbjct: 679 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLP 738

Query: 454 D 454
           +
Sbjct: 739 E 739


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 232/500 (46%), Gaps = 37/500 (7%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N + FC L+H        +K   L D   K+   S++ ++  +                 
Sbjct: 106 NVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL----------------- 148

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSN 286
             + GS    +  I+  L+ +    GE+ L ++  +   D       L CN ++  LV  
Sbjct: 149 -SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I    ++ + MI+      +GV            N  +FD++IN L K GK   A  +
Sbjct: 208 GRIGVVESVYKEMIRRR----IGV------------NVVTFDVVINGLCKVGKFQKAGDV 251

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +M   G   +V  YN +IDG C + ++ ++  LL+EM      P   T N +    CR
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            ++V  A  +  +M+ QG +P V     LI  LC +GK  EA      M   G  P++V 
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+A I G    K +  A E+  DI   G  P+V+ +N +I    KA R+ +A  L + M+
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G+ P+V+TYN LI G+C+ GN+ +A   L++ +E      D++TY  L+D LC  G  
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARK-LAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             A+ L +EM E G  P+ +T+ ALI G  +     AAL    +M++KG + ++  +  L
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL 550

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I  F ++     A  +L EM
Sbjct: 551 IKGFCNKGKLEEANRLLNEM 570



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 231/498 (46%), Gaps = 54/498 (10%)

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           Y NS  F  +LSV       G  +  +  +L+ A+ K GE+D A E  +R  D   RL+ 
Sbjct: 139 YSNSTIF-HSLSVLGS---WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSA 194

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            +   ++   VK+ R+     ++ +M +     +   +DV+I GLCK  + + A  +  +
Sbjct: 195 LSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVED 254

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           MK  G +P                                   +  N+I+      G + 
Sbjct: 255 MKAWGFSPS---------------------------------VITYNTIIDGYCKAGKMF 281

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL+ M+                   + PN  +F+I+I+   +D  +  A  +F EM
Sbjct: 282 KADALLKEMVAKR----------------IHPNEITFNILIDGFCRDENVTAAKKVFEEM 325

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   NV  YN+LI+GLC++ +L+E+  L  +M   G KP   T N++    C+++ +
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  ++  +  +G  P V     LI    K G+  +AF   + M+  G  P++  Y+  
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G      V  A +L +++  +G   D+V YNI++  LCK     +A  L +EM   GL
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGL 505

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            PS  TYN LI+G+ + GN   A L +  ++EK+    +++TY  LI G C  G+ ++A 
Sbjct: 506 NPSHLTYNALIDGYFREGN-STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564

Query: 591 MLWNEMEEKGCAPNRITF 608
            L NEM EKG  PNR T+
Sbjct: 565 RLLNEMLEKGLIPNRTTY 582



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 207/447 (46%), Gaps = 41/447 (9%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S N +L +L K   + +VE   KEM     G +  T   ++   C  G+F KA  V  ++
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G+    + ++ ++  + K G++ KA  L++ M    I  NE TF +LI GF +   V
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A ++F++M + G   +   Y+ +I GLC N +L+ AL L  +M G G+ P+    + L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 247 ITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I     +  L    +E+ +D   R +    +  N+++      G +D A+ LL++M    
Sbjct: 376 INGFCKKKMLK-EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF-LLRSM---- 429

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
            + D G          V PN S+++ +I    ++G +  A  L +EM   G   ++  YN
Sbjct: 430 -MLDTG----------VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+D LC      ++  LL EM E G  P+H T N++     R  +   ALN+   M  +
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKK 538

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G    +    +LIK  C  GK  EA R L +M+++G +P+   Y                
Sbjct: 539 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY---------------- 582

Query: 484 LELFRD-ICAHGCCPDVVA--YNIIIS 507
            ++ RD +   G  PD+    YN+ IS
Sbjct: 583 -DILRDEMMEKGFIPDIDGHLYNVSIS 608



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 22/396 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +  RI  +  + +++++ R  ++      +I  L  VG  ++A  + + +K  G   P
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS-P 262

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN +++  CK+  +   +  LKEM       ++ T   L+  +C       A  VF
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVF 322

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G     V ++ L+      G++D+A  L ++M    ++ N  T+  LI+GF KK
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +A ++ D + K G A +   ++ +I    K  +++ A  L S M  +G+ P+    
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LI     EG   E   L KE+ E   +    +  N ++  L   G   +A  LL  M 
Sbjct: 443 NCLIVGFCREGNVKEARKLAKEM-EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM- 500

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                          F+  ++P+  +++ +I+   ++G    AL++   M + G   N+ 
Sbjct: 501 ---------------FEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV 545

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            YN LI G CN  +LEE+  LL EM E G  P   T
Sbjct: 546 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + F  LI   G  G +++A +L   +   G+C PN  +YNCL+   C+  +V   
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEA 458

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
               KEM+  G   D  T   L+   C  G+  KA+ + +E+ + G    H+ ++ L+  
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + + G    A  +   M+    R N  T+ VLI GF  K ++++A +L ++M + G   +
Sbjct: 519 YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 578

Query: 205 AAMYDVI 211
              YD++
Sbjct: 579 RTTYDIL 585


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 237/489 (48%), Gaps = 21/489 (4%)

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           + + R ++  +   I   VK S V K L+LF++M          +Y+V+I GLCK K++ 
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A QL+ EM    + P     + LI      G  E +  V+E  +   +    +  N+++
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           + L   G ++ A N+L+ M       D+G            P+  +F I+ +    + K 
Sbjct: 292 KGLFKAGMVEDAENVLKEM------KDLGF----------VPDAFTFSILFDGYSSNEKA 335

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNS 399
           + AL ++      G   N +  + L++ LC   ++E++ E+L REM + G  P     N+
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNT 394

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           M    CR+ D+VGA   +  M  QG +P       LI+  C+ G+   A + +  M  +G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P +  Y+  IGG       D   ++ +++  +G  P+VV+Y  +I+ LCK  ++ EA+
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  +M  +G+ P V  YN+LI+G C  G I+ A      ML K+    +++TY TLIDG
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNLVTYNTLIDG 573

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L + G+  +A  L  E+  KG  P+  T+ +LI+G       +  +  +  MK  G+KP 
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633

Query: 640 MFVFVALIS 648
           +  +  LIS
Sbjct: 634 LKTYHLLIS 642



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 168/680 (24%), Positives = 297/680 (43%), Gaps = 55/680 (8%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L    ++ EA  LF  ++ EG+  P++ S   LL+ L K+    +       + +  +  
Sbjct: 119 LNESKMISEAADLFFALRNEGI-YPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELI 158
            K+     +Q         K L +FN +  D  +    ++++L+    K   ++ A +L 
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + M    +  +  T+  LI G+ K    +K+ ++ ++M           ++ ++ GL K 
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLLC 276
             +E A  +  EMK  G  PD    S L    S +++ E  L V E   D  V      C
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357

Query: 277 NSIMRILVSNGSIDQAYNLL-----QAMIKGEPIAD------------VGVEMLM--IFK 317
           + ++  L   G I++A  +L     + ++  E I +            VG  M +  + K
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             + P+  +++ +I    + G+++ A     +M   G   +V  YN LI G       ++
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            +++L+EME++G  P   +  ++  CLC+   ++ A  + R M  +G  P V+   +LI 
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C  GK  +AFRF  +M+++G   ++V Y+  I GL    ++  A +L  +I   G  P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI---------------- 541
           DV  YN +ISG   A  V     L+ EM   G+ P++ TY+LLI                
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657

Query: 542 -----------NG----WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                      NG    +   G++++A     +M+EK  G  D  TY +LI G    G+ 
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL-DKTTYNSLILGQLKVGKL 716

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +   L +EM  +   P   T+  ++ G C+     +A V +R M+EKG   D+ +   L
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           +S    E     A  V+ EM
Sbjct: 777 VSGLKEEWRSKEAEIVISEM 796



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 253/590 (42%), Gaps = 72/590 (12%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           ARR+ P  +    ++   C        F +R            M  D ++      P+  
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVR----------ERMKADHIE------PSLI 285

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N LL+ L K+  V+  E  LKEM+D G+  D +T + L   Y ++ + + AL V+   
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +D G  ++ +  SILL A  K G+++KA E++ R     +  NE  +  +I G+ +K  +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A    + M K G   D   Y+ +I   C+  ++E A +  ++MK  G++P  E  + L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID----QAYNLLQAMIKG 302
           I     + E       + E  D        N  M  +VS G++     +   LL+A I  
Sbjct: 466 IGGYGRKYEFDKCFDILKEMED--------NGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + D GV          SP    ++++I+     GK++ A    +EM + G   N+  Y
Sbjct: 518 RDMEDRGV----------SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LIDGL  + +L E+ +LL E+   G KP  FT NS+        +V   + L  +M+ 
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627

Query: 423 QGHEPWVKHNTLLIKELCK--------------------------------HGKAMEAFR 450
            G +P +K   LLI  LC                                 HG   +AF 
Sbjct: 628 SGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M+++    D   Y++ I G + + ++     L  ++ A    P+   YNII+ G C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           + +    A   + EM  KG +  V   N L++G  +     +A + +S M
Sbjct: 747 EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 8/213 (3%)

Query: 24  SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           SR  + P    +  LI   G  G V+    L++++KR G+  P   +Y+ L+ +LC    
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI-KPTLKTYHLLI-SLCTKEG 648

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSI 140
           ++L E    EM       D      +L  Y   G  +KA ++  ++I+    +D+  ++ 
Sbjct: 649 IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L++   K G++ +   LI+ M+   +     T+ +++ G  +      A   + +M + G
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
           F  D  + + ++ GL +  + + A  + SEM G
Sbjct: 766 FLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 261/556 (46%), Gaps = 41/556 (7%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           L DQ+ R     P+  SYN +L  L ++ C  D + +  + +         +T     + 
Sbjct: 125 LLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARA 184

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C  G+ ++AL++   +  HG V + V +  ++ A    G V +A  L+  M       +
Sbjct: 185 LCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  ++ G     RV +A +L D+M   G       Y  ++ GLC+ +Q + A  +  
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML- 303

Query: 230 EMKGSGITPDFEIL--SKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIM 280
                G  P+  ++  + +I  C  EG+L     E++E         D +T ++L + + 
Sbjct: 304 -----GRVPELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           ++    G I  A  LL+ M K               KG  +PN  ++ I++++  K+G  
Sbjct: 358 KL----GRISSAVRLLREMEK---------------KG-FAPNVVTYTIVLHSFCKNGMW 397

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D   +L  EM+  G   N   YN +I  LC   R++E+  L++EM   G  P   + N++
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC  + +  A ++   +  +G     + +NT+ I  L + G+  +A R   +M+  G
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI-IHALLRDGRWQDAVRLAKEMILHG 516

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D+V Y+  I  +     VD +L L  ++   G  P+ V+YNI+IS LCK +RV +A 
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L  +M+ +GL P + TYN LING CK G +  A+  L + L  E+  PD+ITY  LI  
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK-LHNENVHPDIITYNILISW 635

Query: 580 LCIAGRPDDAIMLWNE 595
            C     DDA ML N 
Sbjct: 636 HCKVRLLDDAAMLLNR 651



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 255/561 (45%), Gaps = 56/561 (9%)

Query: 3   SILSRARRIAPLRVLAQDVV-KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL 61
           S+L+RA   A    L + +V + R   +    G   R L  +G   EA  L   + R G 
Sbjct: 147 SVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHG- 205

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           CVP+   Y  ++ ALC    V      L EM   G   D  T   +++  C  G+  +A 
Sbjct: 206 CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAA 265

Query: 122 SVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            + + ++  G +     +  LL    +  + D+A  ++ R+ + N+ L    F  +I G 
Sbjct: 266 RLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGC 321

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           + + ++ +A +L++ M   G   DA  Y +++ GLCK  ++  A++L  EM+  G  P+ 
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN- 380

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                                       V T T++ +S  +    NG  D    LL+ M 
Sbjct: 381 ----------------------------VVTYTIVLHSFCK----NGMWDDTRALLEEMS 408

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           KG ++ N+  ++ +I  L KDG++D A+ L +EM   GC  ++ 
Sbjct: 409 A---------------KG-LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 452

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN +I  LCN+ ++EE+  +   + E G      T N++   L R      A+ L ++M
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            + G    V     LIK +CK G    +   L +M ++G  P+ V Y+  I  L   +RV
Sbjct: 513 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 572

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             ALEL + +   G  PD+V YN +I+GLCK   +  A +L  ++  + + P + TYN+L
Sbjct: 573 RDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNIL 632

Query: 541 INGWCKSGNIDQAMLCLSRML 561
           I+  CK   +D A + L+R +
Sbjct: 633 ISWHCKVRLLDDAAMLLNRAM 653



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 210/478 (43%), Gaps = 21/478 (4%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF V      +  R ++AL L   M + G   DA +Y  +I  LC    +  A  L +EM
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G   D      ++      G              V     L + +M      G +  
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGR-------------VREAARLVDRMMTKGCMPGVMTY 283

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREM 350
            + LLQ + +    AD    ML    G V   N   F+ +I   L +GKL  A  L+  M
Sbjct: 284 GF-LLQGLCRVRQ-ADEARAML----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETM 337

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +   Y+ L+ GLC   R+  +  LLREME+ GF P   T   +    C+    
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 397

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                L+ +M  +G     +    +I  LCK G+  EA   + +M  +G  PDI  Y+  
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L + ++++ A  +F ++   G   + + YN II  L +  R  +A  L  EMI  G 
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              V +YN LI   CK GN+D++++ L  M EK    P+ ++Y  LI  LC   R  DA+
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKPNNVSYNILISELCKERRVRDAL 576

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  +M  +G AP+ +T+  LI GLCK     AAL     +  + + PD+  +  LIS
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 218/515 (42%), Gaps = 56/515 (10%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE----I 242
           D+AL L D +         ++   ++  L   + L +  QL       G+ P F     +
Sbjct: 89  DRALSLLDSLPPGFLPLRESLLLPLLRSLPPGRALHLLDQLPRRF---GVQPSFRSYNVV 145

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           LS L  +      L L  + +  DR V   T       R L   G  ++A  LL+ M + 
Sbjct: 146 LSVLARADCHADALALYRRMVHRDR-VPPTTFTFGVAARALCRLGRANEALALLRGMAR- 203

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                          G V P+   +  +I+ L   G +  A +L  EM  +GC  +V  +
Sbjct: 204 --------------HGCV-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR-RQ------------- 408
           ++++ G+C   R+ E+  L+  M   G  P   T   + + LCR RQ             
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308

Query: 409 -------DVVG----------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                   V+G          A  L   M ++G +P     ++L+  LCK G+   A R 
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M ++GF P++V Y+  +         D    L  ++ A G   +   YN +I  LCK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+ EA  L  EM ++G  P + +YN +I   C +  +++A      +LE E    + I
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE-EGVVANGI 487

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY T+I  L   GR  DA+ L  EM   GC+ + +++  LI  +CK      +LV    M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            EKG+KP+   +  LIS    E     A E+ K+M
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 295/639 (46%), Gaps = 36/639 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V N    N LLE  C++   D  
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV-NIIIANHLLEGFCEAKRTDEA 178

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++ + LL+  C+ G+  +A  +   + + G V   +   ++ +
Sbjct: 179 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 238

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M     
Sbjct: 239 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 298

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   Y+ +I G     Q + A++++ EM+   I PD   LS L+ S    G+      
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK------ 352

Query: 262 EIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-----LMI 315
            I E RDV +TM +           N  +  +YN+   M+ G       V+M     LM+
Sbjct: 353 -IKEARDVFDTMAMKGQ--------NPDV-FSYNI---MLNGYATKGCLVDMTDLFDLML 399

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G ++P+  +F+++I      G LD A+ +F EM   G   +V  Y  +I  LC   ++
Sbjct: 400 GDG-IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++ E   +M + G  P  +  N + +  C    ++ A  L+ ++   G    +   + +
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 518

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+ M+A       V  G  PD V YS  + G   + +++ AL +F  + + G 
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +++G CK  R+ E   LF EM+ +G+ PS   Y+++I+G  ++G    A +
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               M   ESG + D+ TY  ++ GL      D+AI L+ E+       N IT   +I G
Sbjct: 639 KFHEM--TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + +  R   A   F  +    + P++  +  +I+  + E
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 260/520 (50%), Gaps = 20/520 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++ + G+  P+  +YN ++ ALCK+ ++D  E  L++M +     + +T
Sbjct: 246 GDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 304

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  Y ++GQ+ +A+ VF E+  H  + + V  S+L+ +  K+G++ +A ++ + M 
Sbjct: 305 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 364

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  ++ ++++G+  K  +     LFD M   G A D   ++V+I        L+
Sbjct: 365 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 424

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A+ +++EM+  G+ PD      +I +    G++   +++  +  D+ V       N ++
Sbjct: 425 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +   ++GS+ +A  L+  ++        G+ + ++F          F  IIN L K G++
Sbjct: 485 QGFCTHGSLLKAKELISEIMNN------GMHLDIVF----------FSSIINNLCKLGRV 528

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A ++F     +G   +  +Y+ L+DG C   ++E++  +   M  +G +P      ++
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +   L+L R+M  +G +P     +++I  L + G+ + A     +M + G 
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI  Y+  + GL   +  D A+ LF+++ A     +++  N +I G+ + +RV EA+D
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           LF  +    L+P+V TY+++I    K G +++A    S M
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM 748



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 39/385 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP + ++ I+++   +  + +LAL+ F ++ + G   N+ + N+L++G C + R +E+ 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 380 E-LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLI 436
           + LL    E G  P  F+ + + + LC +     A +L+R M   G    P V     +I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA------------- 483
               K G   +A     +MVQ G  PD+V Y++ +  L   + +D A             
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 484 ----------------------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
                                 + +F+++  H   PDVV  ++++  LCK  ++ EA D+
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ M  KG  P V +YN+++NG+   G +   M  L  ++  +  +PD  T+  LI    
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVD-MTDLFDLMLGDGIAPDFYTFNVLIKAYA 418

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  D A++++NEM + G  P+ +T+  +I  LC+  +   A+  F  M ++G+ PD +
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 478

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  LI  F +  +   A E++ E+
Sbjct: 479 AYNCLIQGFCTHGSLLKAKELISEI 503



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 196/413 (47%), Gaps = 22/413 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LFD +  +G+  P+ Y++N L++A      +D   +   EM+D+G   D  T   ++   
Sbjct: 394 LFDLMLGDGI-APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ D A+  FN++ID G   D++ ++ L+  F   G + KA ELI  + +  + L+ 
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             F  +I+   K  RV  A  +FD     G   DA +Y +++ G C   ++E AL+++  
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M  +GI P+  +   L+      G +     L +E+ + R +   T+L + I+  L    
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ-RGIKPSTILYSIIIDGLF--- 628

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              QA   + A +K   + + G+ M          +  +++I++  L K+   D A+ LF
Sbjct: 629 ---QAGRTVPAKMKFHEMTESGIAM----------DICTYNIVLRGLFKNRCFDEAIFLF 675

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +E+  +    N+   N +IDG+  + R+EE+ +L   +  S   P   T + M   L + 
Sbjct: 676 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKE 735

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             V  A ++   M+  G EP  +    +++EL K  + + A  +L+ + +  F
Sbjct: 736 GLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 788


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 295/661 (44%), Gaps = 55/661 (8%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-- 92
           FL+ C    G+V++A  +F    + G+ +P +  Y  +L +L  S  VDL+     ++  
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCR 209

Query: 93  ---QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW- 148
              +  G     + L  L   +C  G+  KAL        H  V E  F + +V+ +K  
Sbjct: 210 GGIEPSGVSAHGFVLDAL---FCK-GEVTKALDF------HRLVMERGFRVGIVSCNKVL 259

Query: 149 -----GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                 +++ A  L+  + DC    N  TFC LI+GF K+  +D+A  LF  M + G   
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVK 261
           D   Y  +I G  K   L M  +L+S+    G+  D  + S  I      G+L    +V 
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLM------ 314
           +    + ++   +    +++ L  +G I +A+ +  Q + +G   + V    L+      
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439

Query: 315 ------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                       + K    P+   + ++++ L K G +  A+    +M       NV ++
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR------CLCRRQDVVGALNL 416
           N+LIDG C  NR +E+ ++ R M   G KP   T  ++ R        C+       L L
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M+       +    ++I  L K  +  +A +F  ++++    PDIV Y+  I G   
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           ++R+D A  +F  +      P+ V   I+I  LCK   +  A  +F+ M  KG  P+  T
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L++ + KS +I+ +      M EK   SP +++Y+ +IDGLC  GR D+A  ++++ 
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
            +    P+ + +  LI G CK  R   A + +  M   G+KPD      L+   LSE NP
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD-----DLLQRALSEYNP 793

Query: 657 P 657
           P
Sbjct: 794 P 794



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 236/569 (41%), Gaps = 69/569 (12%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS-------------ILLVAFSKWG 149
           +   +  V   +G FD A  VF+E+I +   D +V                L+    ++G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            VDKA E+        + + + +   +++  +   RVD     FDK+ + G         
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG--------- 211

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
                                ++ SG++    +L  L   C  E    L    +  +R  
Sbjct: 212 ---------------------IEPSGVSAHGFVLDALF--CKGEVTKALDFHRLVMERGF 248

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               + CN +++ L S   I+ A  LL  ++   P                +PN  +F  
Sbjct: 249 RVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGP----------------APNVVTFCT 291

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN   K G++D A  LF+ M Q G   ++  Y+ LIDG   +  L   ++L  +    G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            K      +S      +  D+  A  + ++M  QG  P V   T+LIK LC+ G+  EAF
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                +++ G  P IV YS+ I G      +     L+ D+   G  PDVV Y +++ GL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            K   +  A     +M+ + +  +V  +N LI+GWC+    D+A L + R++      PD
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA-LKVFRLMGIYGIKPD 530

Query: 570 VITYTTLI------DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           V T+TT++      D  C   +P   + L++ M+    + +      +I  L KC R   
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           A   F  + E  M+PD+  +  +I  + S
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCS 619


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 269/578 (46%), Gaps = 41/578 (7%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           L DQ+       P+  SYN +L A  ++ C  D++ +  + +         +T +   + 
Sbjct: 122 LLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARA 181

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C  G+ D+AL++   +  HG V + V +  ++ A    G V++A  L++ M       +
Sbjct: 182 LCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSAD 241

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  ++HG     R+ +A +L D+M   G   +A  Y  ++ GLC   Q+E A  +  
Sbjct: 242 VNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML- 300

Query: 230 EMKGSGITPDFEIL--SKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIM 280
                G  P+  ++  + +I  C  +G+L     E++E         D +T ++L + + 
Sbjct: 301 -----GRVPELNVVLFNTVIGRCLLDGKLKE-AAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           ++    G +  A  LL+ M       D G           +P+  ++ I++++  ++G  
Sbjct: 355 KL----GRLGSAMKLLREM------EDKGF----------APSIVTYTILLHSFCRNGMW 394

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D   ++   M+  G   N+  YN +I  +C   R++++   ++EM+  G+KP   T N++
Sbjct: 395 DNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTI 454

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC    +  A  L   +  +G     + +NTL I  L ++G   +A     DMV  G
Sbjct: 455 IYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL-IHALLRNGSWQDAISLANDMVLHG 513

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              DIV Y+  I  L     VD ++ L  ++   G  P+ V+YN++IS LCK +RV +A 
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L  EM+ + L P + TYN LING CK G +  A+  L + L  E    D+ITY  LI  
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEK-LHNEDVHADIITYNILISW 632

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            C A    DA ML N     G  PN  T+  ++    +
Sbjct: 633 HCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 226/512 (44%), Gaps = 20/512 (3%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCN-IRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           ++ +L AF++         L  RM   + +     TF +      +  R D+AL +   M
Sbjct: 139 YNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSM 198

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            + G   D  +Y  +I  LC    +  A  L  EM   G + D    + ++      G L
Sbjct: 199 ARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRL 258

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
               + +  DR           ++R  V N +I   +     ++KG  +A    E   + 
Sbjct: 259 REAARLV--DR----------MMIRGCVPN-AITYGF-----LLKGLCLASQVEEARTML 300

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                 N   F+ +I   L DGKL  A  L+  M   GC  +   Y+ LI GLC   RL 
Sbjct: 301 GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLG 360

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + +LLREME+ GF P+  T   +    CR         ++  M  +G    ++    +I
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             +CK  +  +A RF+ +M  +G+ PDI  Y+  I  L +  +++ A  LF ++   G  
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            + + YN +I  L +     +A  L N+M+  G    + +YN LI   C+ GN+D++++ 
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML 540

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           LS M EK    P+ ++Y  LI  LC   R  DA+ L  EM  +   P+ +T+  LI GLC
Sbjct: 541 LSEMAEK-GIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLC 599

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           K     AAL     +  + +  D+  +  LIS
Sbjct: 600 KMGWMHAALNLLEKLHNEDVHADIITYNILIS 631



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 242/536 (45%), Gaps = 30/536 (5%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R++ +D V    F          R L  +G  +EA  +   + R G CVP+   Y  ++ 
Sbjct: 161 RMVHRDRVPPTTF----TFSIAARALCRLGRADEALTMLRSMARHG-CVPDTVLYQTVIH 215

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
           ALC    V+     L EM   G   D  T   ++   C  G+  +A  + + ++  G V 
Sbjct: 216 ALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVP 275

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             + +  LL       +V++A  ++ R+ + N+ L    F  +I   +   ++ +A +L+
Sbjct: 276 NAITYGFLLKGLCLASQVEEARTMLGRVPELNVVL----FNTVIGRCLLDGKLKEAAELY 331

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + M   G   DA  Y ++I GLCK  +L  A++L  EM+  G  P     + L+ S    
Sbjct: 332 ETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRN 391

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-SID-QAYN-LLQAMIKGEPIADVGV 310
           G        +W++           +++ ++   G S++ + YN ++ A+ K   + D   
Sbjct: 392 G--------MWDN---------IRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMR 434

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            M  +      P+  +++ II  L  + +++ A  LF  +   G + N   YN LI  L 
Sbjct: 435 FMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALL 494

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +   +++  L  +M   G      + N + + LCR  +V  ++ L+ +M  +G +P   
Sbjct: 495 RNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNV 554

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              LLI ELCK  +  +A     +M+ +   PDIV Y+  I GL  +  +  AL L   +
Sbjct: 555 SYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKL 614

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
                  D++ YNI+IS  CKA+ + +A  L N  +T G+ P+  T+ +++  + +
Sbjct: 615 HNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 206/484 (42%), Gaps = 64/484 (13%)

Query: 224 ALQLYSEMKGS-GITPDFE----ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
           AL L  ++     ++P F     +L+    +      L+L  + +  DR V   T   + 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDR-VPPTTFTFSI 177

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
             R L   G  D+A  +L++M +                G V P+T  +  +I+ L   G
Sbjct: 178 AARALCRLGRADEALTMLRSMAR---------------HGCV-PDTVLYQTVIHALCAQG 221

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            ++ A +L  EM  +GC  +V  +N+++ GLC   RL E+  L+  M   G  P   T  
Sbjct: 222 GVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYG 281

Query: 399 SMFRCLCRRQDV---------VGALNLV----------------------RKMRVQGHEP 427
            + + LC    V         V  LN+V                        M  +G  P
Sbjct: 282 FLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPP 341

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI-----GGLIDIKRVDL 482
                ++LI  LCK G+   A + L +M  +GF P IV Y+  +      G+ D  R   
Sbjct: 342 DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA-- 399

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            LE+  D    G   ++  YN +I  +CK +R+ +A     EM ++G  P + TYN +I 
Sbjct: 400 MLEVMSD---KGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIY 456

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C +  +++A      +L  E    + ITY TLI  L   G   DAI L N+M   GC+
Sbjct: 457 HLCNNNQMEEAEYLFENLLH-EGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS 515

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            + +++  LI  LC+      +++    M EKG+KP+   +  LIS          A E+
Sbjct: 516 LDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575

Query: 663 LKEM 666
            KEM
Sbjct: 576 SKEM 579



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 182/434 (41%), Gaps = 70/434 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD------------ 83
           ++  L ++G + EA  L D++   G CVPN  +Y  LL+ LC +  V+            
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIRG-CVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL 306

Query: 84  ------------LVEMRLKE-------MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
                       L++ +LKE       M   G   D +T + L+   C  G+   A+ + 
Sbjct: 307 NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLL 366

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+ D G+    V ++ILL +F + G  D    ++E M D  + +N + +  +I    K 
Sbjct: 367 REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKD 426

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+D A++   +M   G+  D   Y+ II  LC N Q+E A  L+  +   G+  +    
Sbjct: 427 RRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITY 486

Query: 244 SKLITSCSDEGELTLLVKEIWEDRD--VNTMTLL--------CNSIMRILVSNGSIDQAY 293
           + LI +        LL    W+D     N M L          N +++ L  +G++D++ 
Sbjct: 487 NTLIHA--------LLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI 538

Query: 294 NLLQAMI-KGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTL 334
            LL  M  KG    +V   +L+                  +    ++P+  +++ +IN L
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  AL+L  ++       ++  YN LI   C +  L ++  LL     SG  P  
Sbjct: 599 CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNE 658

Query: 395 FTLNSMFRCLCRRQ 408
            T   M +   R+ 
Sbjct: 659 RTWGIMVQNFVRKS 672



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 4/170 (2%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           LA D+V   C +   +   LI+ L   G V+ + ML  ++  +G+  PNN SYN L+  L
Sbjct: 505 LANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI-KPNNVSYNLLISEL 563

Query: 77  CKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVD 134
           CK+  V D +E+  KEM +     D  T   L+   C  G    AL++  ++ +     D
Sbjct: 564 CKTRRVRDALELS-KEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHAD 622

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
              ++IL+    K   +  A  L+ R     I  NE+T+ +++  FV+KS
Sbjct: 623 IITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/609 (25%), Positives = 266/609 (43%), Gaps = 92/609 (15%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
           YT   L+  Y  + + D  L VF  ++  G   D   ++ L+  FSK GEVDKA +L  +
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++  I  N  T+  LI+G  K   +DKA ++  +M  +G   +   Y+ +I G   +  
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
            + +++++ EM  S + PD              G                     CNS M
Sbjct: 310 WKESVRVFKEMSSSLLVPDV-------------GN--------------------CNSFM 336

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADV-----------------GVEML---MIFKGTV 320
             L  +G I +A ++  +M+   P  DV                 G++ L   M+ +G V
Sbjct: 337 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV 396

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+   F+ +IN   + G +D +L +F +MT+ G   ++  ++ +I   C   RL+++ E
Sbjct: 397 -PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKEL 439
               M ++G  P     + + +  C R+D+V A  L+  M  +G   P +K  T +I  L
Sbjct: 456 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 515

Query: 440 CKHGKAM-----------------------------------EAFRFLTDMVQEGFLPDI 464
           CK G+                                     EA   L  M   G  PDI
Sbjct: 516 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 575

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  + G     R+D AL LFRD+         V+YNII+ GL +A+R   A+++F+E
Sbjct: 576 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 635

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           MI  G+  S+ TY  ++ G C++   D+A + L ++        D++T+  +I  +   G
Sbjct: 636 MIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF-DILTFNIVIRAMFKVG 694

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  +A  L+  +   G  P  +T+  +IT L K +    A   F  M++    PD  +  
Sbjct: 695 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 754

Query: 645 ALISAFLSE 653
            +I   L++
Sbjct: 755 EIIRMLLNK 763



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 259/611 (42%), Gaps = 101/611 (16%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++IL+  + +    D    +  R+    +  +  ++  LI GF K+  VDKA  LF K
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           M + G   +   Y  +I GLCK K+++ A ++  +M G+G+ P+    + LI   S  G 
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309

Query: 255 --ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV- 308
             E   + KE+       DV      CNS M  L  +G I +A ++  +M+   P  DV 
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGN----CNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 309 ----------------GVEML---MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                           G++ L   M+ +G V P+   F+ +IN   + G +D +L +F +
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVV-PDRHVFNTLINAYARLGMMDKSLLMFED 424

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           MT+ G   ++  ++ +I   C   RL+++ E    M ++G  P     + + +  C R+D
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 484

Query: 410 VVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAME--------------------- 447
           +V A  L+  M  +G   P +K  T +I  LCK G+  E                     
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544

Query: 448 --------------AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
                         A   L  M   G  PDI  Y+  + G     R+D AL LFRD+   
Sbjct: 545 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 604

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
                 V+YNII+ GL +A+R   A+++F+EMI  G+  S+ TY  ++ G C++   D+A
Sbjct: 605 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 664

Query: 554 MLCLSRML-----------------------EKESGS-----------PDVITYTTLIDG 579
            + L ++                         +E+             P ++TY  +I  
Sbjct: 665 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 724

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L      +DA  L++ ME+  C P+      +I  L        A  +   + +KG+ P+
Sbjct: 725 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 784

Query: 640 MFVFVALISAF 650
                 LI  F
Sbjct: 785 ATTTSLLIYLF 795



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 263/593 (44%), Gaps = 22/593 (3%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R  + P    +  LI      G V++A+ LF +++ +G+ +PN  +Y+ L+  LCK+  +
Sbjct: 217 RTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEM 275

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
           D  E  L++M   G   +  T   L+  Y  SG + +++ VF E+     V D    +  
Sbjct: 276 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 335

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           + A  K G + +A ++ + M     + +  ++  L+HG+     +     LF+ M   G 
Sbjct: 336 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 395

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D  +++ +I    +   ++ +L ++ +M   G+ PD    S +I++    G L   ++
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           +     D  V   T + + +++   +   + +A  L+  M+                KG 
Sbjct: 456 KFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS---------------KGI 500

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P    F  IIN L K+G++     +   +   G   N+  +N+L+DG C    ++E+ 
Sbjct: 501 PPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAV 560

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL  ME  G +P  +T N++    C+   +  AL L R M  +          +++  L
Sbjct: 561 GLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 620

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            +  + + A     +M++ G    I  Y+  +GGL      D A  L   + +     D+
Sbjct: 621 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 680

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + +NI+I  + K  R  EA++LF  + T GL+P++ TY ++I    K  + + A    S 
Sbjct: 681 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 740

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           M EK S +PD      +I  L   G    A    +++++KG  P   T   LI
Sbjct: 741 M-EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 178/367 (48%), Gaps = 19/367 (5%)

Query: 295 LLQAMIKGEPIA---DVGVEMLMIFK-------GTVSPNTSSFDIIINTLLKDGKLDLAL 344
           LL A+ +  P A   DV    + +FK          +P   +++I+IN   +  + DL L
Sbjct: 150 LLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGL 209

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F  + + G   +VF YN LIDG      ++++++L  +MEE G  P   T +S+   L
Sbjct: 210 PVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGL 269

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ +++  A  ++R+M   G  P       LI      G   E+ R   +M     +PD+
Sbjct: 270 CKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDV 329

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
              ++ +  L    R+  A ++F  +   G  PDV++Y  ++ G   A  +A  ++LFN 
Sbjct: 330 GNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNV 389

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ +G++P    +N LIN + + G +D+++L    M  K+  +PD+IT++T+I   C  G
Sbjct: 390 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM-TKQGVNPDIITFSTVISAFCRLG 448

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM----MKEKGMKPDM 640
           R DDA+  +N M + G  P+   +  LI G C     R  LV  +     M  KG+ P  
Sbjct: 449 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN----RRDLVKAKELISDMLSKGIPPPC 504

Query: 641 FVFVALI 647
             F   I
Sbjct: 505 IKFFTSI 511



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 238/562 (42%), Gaps = 53/562 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    + G+ +E+  +F ++    L VP+  + N  + ALCK   +         M   
Sbjct: 300 LIHGYSTSGMWKESVRVFKEMS-SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 358

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  +   LL  Y  +G      ++FN ++  G V D HVF+ L+ A+++ G +DK+
Sbjct: 359 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 418

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M    +  +  TF  +I  F +  R+D A++ F+ M  +G   D A+Y  +I G
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD-FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            C  + L  A +L S+M   GI P   +  + +I +   EG        + E +DV    
Sbjct: 479 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR-------VAEGKDV---- 527

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                          +D                      L+I  G   PN  +F+ +++ 
Sbjct: 528 ---------------VD----------------------LIIHTGQ-RPNLITFNSLVDG 549

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               G +  A+ L   M  +G   +++ YN L+DG C   R++++  L R+M       T
Sbjct: 550 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 609

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             + N +   L + +  + A  +  +M   G    +     ++  LC++    EA   L 
Sbjct: 610 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 669

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +       DI+ ++  I  +  + R   A ELF  I  +G  P ++ Y ++I+ L K +
Sbjct: 670 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 729

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
              +A++LF+ M      P     N +I      G + +A   LS+ ++K+   P+  T 
Sbjct: 730 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK-IDKKGILPEATTT 788

Query: 574 TTLIDGLCIAGRPDDAIMLWNE 595
           + LI    + G+  + I L  E
Sbjct: 789 SLLIYLFSVNGKYREYIKLLPE 810



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 16/334 (4%)

Query: 342 LALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           LA+ LF+ M +  C +    ++ YN LI+    + R +    +   +  +G  P  F+ N
Sbjct: 169 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYN 228

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++     +  +V  A +L  KM  QG  P V   + LI  LCK  +  +A R L  MV  
Sbjct: 229 ALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGA 288

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P+ + Y+  I G         ++ +F+++ +    PDV   N  ++ LCK  R+ EA
Sbjct: 289 GVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEA 348

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSG------NIDQAMLCLSRMLEKESGSPDVIT 572
            D+F+ M+ KG  P V +Y  L++G+  +G      N+   M+C       E   PD   
Sbjct: 349 RDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC-------EGVVPDRHV 401

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           + TLI+     G  D +++++ +M ++G  P+ ITF  +I+  C+  R   A+  F  M 
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + G+ PD  V+  LI    +  +   A E++ +M
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDM 495



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 195/481 (40%), Gaps = 62/481 (12%)

Query: 18  AQDVVKSRCFMSPG----ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
           A+D+  S     P     + G L+    + G +   + LF+ +  EG+ VP+ + +N L+
Sbjct: 348 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV-VPDRHVFNTLI 406

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW- 132
            A  +   +D   +  ++M   G   D  T + ++  +C  G+ D A+  FN +ID G  
Sbjct: 407 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 466

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNI-------------------------- 166
            D  V+S L+       ++ KA ELI  M    I                          
Sbjct: 467 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 526

Query: 167 ----------RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                     R N  TF  L+ G+     + +A+ L D M   G   D   Y+ ++ G C
Sbjct: 527 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 586

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K+ +++ AL L+ +M    +T    +   +I     +   T++ KE++ +   + M +  
Sbjct: 587 KHGRIDDALTLFRDMLHKRVTLT-SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645

Query: 277 NSIMRI---LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++   +   L  N   D+A  LL+ +                F   V  +  +F+I+I  
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKL----------------FSMNVKFDILTFNIVIRA 689

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           + K G+   A  LF  ++  G +  +  Y  +I  L      E++  L   ME+S   P 
Sbjct: 690 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
              LN + R L  + +V  A N + K+  +G  P     +LLI     +GK  E  + L 
Sbjct: 750 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLP 809

Query: 454 D 454
           +
Sbjct: 810 E 810


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 237/524 (45%), Gaps = 25/524 (4%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW--GEVDKACEL 157
           D +     +Q    +G   +A+ +   +   G    + FS  +V    W  G    A E+
Sbjct: 26  DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 85

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            + M +  +  N  T+  +I G +K   ++   +L D+M   G   +A  Y+V++ GLC+
Sbjct: 86  FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 145

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMT 273
             ++     L  EM    + PD    S L    S  G+    L+L  K +     +   T
Sbjct: 146 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYT 205

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
             C+ ++  L  +G +  A  +LQ+++    +                P    ++ +IN 
Sbjct: 206 --CSILLNGLCKDGKVSIAEEVLQSLVNAGLV----------------PTRVIYNTLING 247

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             + G+L+ A S F +M       +   YN LI+GLC + R+  + +LL EM+++G  PT
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++     R   +     ++ +M+  G +P V     ++   CK+GK  EA   L 
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM  +  LP+   Y+A I   ++    D A  L   + ++G  P +V YN++I GLC   
Sbjct: 368 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 427

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +++EAE++ N +    LIP   +YN LI+  C  GNID+A L L + + K      V TY
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTY 486

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             LI GL  AGR ++   L+ +M +    P+      ++    K
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 236/525 (44%), Gaps = 28/525 (5%)

Query: 149 GEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           G++ +A  ++ RM  D     N  ++ V+I G  +  R   A+++FD+MT+     +   
Sbjct: 41  GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 100

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIW 264
           Y+ +I G  K   LE   +L  +M   G+ P+   + +L   +      GE + L+ E+ 
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160

Query: 265 EDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
             +   D  T ++L + + R    NG      +L    +K       GV        T+ 
Sbjct: 161 SQKMVPDGFTYSILFDGLSR----NGDSKAMLSLFGKYLKN------GV--------TIG 202

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
             T S  I++N L KDGK+ +A  + + +   G +    +YN LI+G C +  LE ++  
Sbjct: 203 DYTCS--ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 260

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +M+    KP H T N++   LC+ + +  A +L+ +M+  G  P V+    LI    +
Sbjct: 261 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 320

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  + F  L++M + G  P++V Y + +       ++  A+ +  D+      P+   
Sbjct: 321 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 380

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN II    +     +A  L  +M + G+ PS+ TYNLLI G C    I +A   ++  L
Sbjct: 381 YNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS-L 439

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 PD ++Y TLI   C  G  D A+ L   M + G      T+  LI+GL    R 
Sbjct: 440 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 499

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 ++ M +  + P   +   ++ A+    N   A ++ KEM
Sbjct: 500 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 170/362 (46%), Gaps = 2/362 (0%)

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNN 364
           ADV     ++      P+T +++  +   +  G L  A+ + R M + G    N F YN 
Sbjct: 9   ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 68

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I G+  + R  ++ E+  EM E    P H T N+M     +  D+     L  +M   G
Sbjct: 69  VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHG 128

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P      +L+  LC+ G+  E    L +M  +  +PD   YS    GL         L
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF     +G        +I+++GLCK  +V+ AE++   ++  GL+P+   YN LING+
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C++G ++ A     +M  +    PD ITY  LI+GLC A R  +A  L  EM++ G  P 
Sbjct: 249 CQTGELEGAFSTFGQMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             TF  LI    +  +     +    M+E G+KP++  + ++++AF      P A  +L 
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367

Query: 665 EM 666
           +M
Sbjct: 368 DM 369



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 232/533 (43%), Gaps = 21/533 (3%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQDYGWGYD 100
           + G + EA  +  ++ R+G   PN +SYN ++  + ++    D VE+   EM +     +
Sbjct: 39  AAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-FDEMTERAVLPN 97

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   ++  +   G  +    + ++++ HG     + +++LL    + G + +   L++
Sbjct: 98  HITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 157

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  +  T+ +L  G  +       L LF K  K+G         +++ GLCK+ 
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCN 277
           ++ +A ++   +  +G+ P   I + LI      GEL        +   R +    +  N
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++  L     I  A +LL  M       D GV          +P   +F+ +I+   + 
Sbjct: 278 ALINGLCKAERITNAQDLLMEM------QDNGV----------NPTVETFNTLIDAYGRT 321

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+L+    +  EM + G   NV  Y ++++  C + ++ E+  +L +M      P     
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++            A  LV KM+  G  P +    LLIK LC   +  EA   +  +  
Sbjct: 382 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 441

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              +PD V Y+  I        +D AL+L + +  +G    V  Y+ +ISGL  A R+ E
Sbjct: 442 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNE 501

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            E L+ +M+   ++PS A +N+++  + K GN  +A      ML+K +   D 
Sbjct: 502 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 554



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%)

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R A+    F  + + G  P    +N  +     +G++ +A+  L RM    +  P+  +Y
Sbjct: 7   RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 66

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +I G+  AGR  DA+ +++EM E+   PN IT+  +I G  K     A       M  
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126

Query: 634 KGMKPDMFVFVALISAF 650
            G+KP+   +  L+S  
Sbjct: 127 HGLKPNAITYNVLLSGL 143


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 253/516 (49%), Gaps = 34/516 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+  YC  G+   A  V       G  +   ++ L+  + + G +D A  LI  M    +
Sbjct: 130 LVAGYCRDGRLADAERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---V 186

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+  ++ G     + ++A +L  +M ++    +   +   I   C+N  L+ A+Q
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  +M   G TPD  I S LI   S++G +   +  +      NTM    N++       
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL------NTMLCKPNTV------- 293

Query: 287 GSIDQAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                 YN  L+ +   E   D+G  M  + +   SPN ++F ++I++L ++  +D A+ 
Sbjct: 294 -----CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  +M + GC  +   YN +I+ L    R++++  LL  M     KP     N++ +  C
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFC 405

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R +    A  L+ +M  +   P ++    +LI  LC++G    A +    M +    PDI
Sbjct: 406 RAERWHDASELIAQM-FRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDI 464

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V YS+ + G  +   V++A++LFR +    C PD+ +YN ++ GLC+A R  +A +L  E
Sbjct: 465 VTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ K   P+  T+N+LIN  C+ G +D+A+  L +M    S +PD+ TY  LI+G    G
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPDIFTYNALINGFSEQG 580

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           R DDA+ L + M    C P+ I++ + + GLC+ +R
Sbjct: 581 RLDDALKLLSTM---SCKPDAISYNSTLKGLCRAER 613



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 223/502 (44%), Gaps = 48/502 (9%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+ G+ +  R+  A ++      +G A++   Y  +I G C++ +L+ AL+L + M   
Sbjct: 129 TLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIASMP-- 185

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN----------SIMRILV 284
            + PD    + ++          L + + WE+ +     ++ N          + +R   
Sbjct: 186 -VAPDTYTYNTVLKG--------LCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFC 236

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG +D+A  LL  M +     DV +                +  +IN   + G +D AL
Sbjct: 237 QNGLLDRAVQLLDQMPRYGCTPDVVI----------------YSTLINGFSEQGHVDQAL 280

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L   M    C  N   YN  + GLC + R E+  EL+ EM   G  P   T + +   L
Sbjct: 281 DLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A+ ++ +M   G EP   +  ++I  L + G+  +A R L  MV +   PD 
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDA 394

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + ++A + G    +R   A EL   +    C    + +NI+I  LC+   V  A  +F +
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQ 454

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M      P + TY+ L+NG+ + G ++ A+     M  K    PD+ +Y  ++ GLC A 
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK----PDIFSYNAVLKGLCRAA 510

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R +DA  L  EM  K C PN +TF  LI  LC+      A+     M   G  PD+F + 
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           ALI+ F  +     A ++L  M
Sbjct: 571 ALINGFSEQGRLDDALKLLSTM 592



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 229/477 (48%), Gaps = 29/477 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ Y+YN +L+ LC +   +  E  + EM       ++ T    ++ +C +G  D+A+ 
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +++  +G   D  ++S L+  FS+ G VD+A +L+  M     + N   +   + G  
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLC 303

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R +   +L  +M + G + + A + ++I  LC+N  ++ A+++  +M+  G  PD  
Sbjct: 304 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 363

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMI 300
             + +I S S+ G +   +      R +N+M    +++             +N +L+   
Sbjct: 364 NYNIIINSLSERGRVDDAL------RLLNSMVCKPDAL------------GFNAVLKGFC 405

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           + E   D    +  +F+        +F+I+I+TL ++G ++ A  +F +M +  C  ++ 
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y++L++G      +E + +L R M     KP  F+ N++ + LCR      A  L+ +M
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +   P      +LI  LC+ G    A   L  M   G  PDI  Y+A I G  +  R+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           D AL+L   +    C PD ++YN  + GLC+A+R  +AE+L  EM+     P+  T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 198/442 (44%), Gaps = 27/442 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  ++   + + C++  +D     L +M  YG   D    + L+  +   G  D+AL
Sbjct: 221 CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 280

Query: 122 SVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            + N ++     V  +     L    +W ++    EL+  M       NE TF +LI   
Sbjct: 281 DLLNTMLCKPNTVCYNAALKGLCIAERWEDIG---ELMAEMVRKGCSPNEATFSMLISSL 337

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + + VD A+++ ++M K G   D   Y++II  L +  +++ AL+L + M        F
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGF 397

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             + K         + + L+ +++ D D   + +  N ++  L  NG ++ A  + + M 
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFRD-DCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                   +P+  ++  ++N   + G +++A+ LFR M    C  ++F
Sbjct: 457 RYR----------------CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIF 497

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN ++ GLC + R E++ EL+ EM      P   T N +   LC++  V  A+ ++ +M
Sbjct: 498 SYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P +     LI    + G+  +A + L+ M  +   PD + Y++ + GL   +R 
Sbjct: 558 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERW 614

Query: 481 DLALELFRDICAHGCCPDVVAY 502
             A EL  ++  + C P+ V +
Sbjct: 615 QDAEELVAEMLRNKCTPNEVTF 636



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 55/431 (12%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG--------------------- 60
           +++RC  +       IR     GL++ A  L DQ+ R G                     
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 61  ----------LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
                     LC PN   YN  L+ LC +   + +   + EM   G   ++ T + L+  
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C +   D A+ V  ++  +G   + V ++I++ + S+ G VD A  L+  M     + +
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM---VCKPD 393

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              F  ++ GF +  R   A +L  +M +         ++++I  LC+N  +  A Q++ 
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFE 453

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M     TPD    S L+   S++G + + ++                 + R +     I
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ-----------------LFRSMPCKPDI 496

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                +L+ + +     D G  +  +      PN  +F+I+IN+L + G +D A+ +  +
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   ++F YN LI+G     RL+++ +LL  M     KP   + NS  + LCR + 
Sbjct: 557 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAER 613

Query: 410 VVGALNLVRKM 420
              A  LV +M
Sbjct: 614 WQDAEELVAEM 624



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 35/357 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+   L  ++ R+G C PN  +++ L+ +LC++  VD     L++M+ YG   D      
Sbjct: 309 EDIGELMAEMVRKG-CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 367

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM--DDC 164
           ++      G+ D AL + N ++     D   F+ +L  F +      A ELI +M  DDC
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCKP--DALGFNAVLKGFCRAERWHDASELIAQMFRDDC 425

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
              L E TF +LI    +   V+ A Q+F++M +     D   Y  ++ G  +   +E+A
Sbjct: 426 P--LIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA 483

Query: 225 LQLYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +QL+  M      PD      +L  L  +   E    L+ + + +D   N +T   N ++
Sbjct: 484 IQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF--NILI 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +D+A  +L+ M       + G           +P+  +++ +IN   + G+L
Sbjct: 539 NSLCQKGLVDRAIEVLEQM------PNYG----------STPDIFTYNALINGFSEQGRL 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           D AL L   M+   C  +   YN+ + GLC + R +++ EL+ EM  +   P   T 
Sbjct: 583 DDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 8/234 (3%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RA R      L   + +  C +       LI  L   GLV  A  +F+Q+ R   C P+ 
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRY-RCTPDI 464

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y+ LL    +     LVE+ ++  +      D ++   +L+  C + +++ A  +  E
Sbjct: 465 VTYSSLLNGFSEQ---GLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++      +E  F+IL+ +  + G VD+A E++E+M +     +  T+  LI+GF ++ R
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 581

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +D AL+L   M+      DA  Y+  + GLC+ ++ + A +L +EM  +  TP+
Sbjct: 582 LDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 35/199 (17%)

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++ NI+I  LC   R+A+AE + + +       +V ++N L+ G+C+ G +  A   L  
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAADAV-SHNTLVAGYCRDGRLADAERVLG- 148

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME---------------------- 597
              + +G+ +V+TYT LIDG C +GR DDA+ L   M                       
Sbjct: 149 -AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWE 207

Query: 598 ----------EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                        C PN +TF   I   C+      A+     M   G  PD+ ++  LI
Sbjct: 208 EAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267

Query: 648 SAFLSELNPPLAFEVLKEM 666
           + F  + +   A ++L  M
Sbjct: 268 NGFSEQGHVDQALDLLNTM 286


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/601 (25%), Positives = 275/601 (45%), Gaps = 38/601 (6%)

Query: 80  CSVDLVEMRLKEMQDY--------GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           CS   +  ++ E+ D+         +GY +  +  L++    S +FD  L +F E++  G
Sbjct: 6   CSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVE----SKKFDNVLDLFKEMVGLG 61

Query: 132 W-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
           +  D+ V+   ++A  K G++  A EL E M    +  N   + VLI G  K+ R+  A 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           +LF +M+      +   ++ +I G CK  ++++A+ L   MK   + P     + L++  
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG- 180

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIAD 307
                       + + R +     + N I      NG +   +    +   ++K +  A 
Sbjct: 181 ------------LCKARRIEEARCMLNEIK----CNGFVPDGFTYSIIFDGLLKSDDGAG 224

Query: 308 VGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
             +++    I KG V  +  +  I++N L K+GK++ A  + + + + G +    +YN +
Sbjct: 225 AALDLYREAIGKG-VKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           ++G C    ++ +   + +ME  G +P     NS+    C  Q +  A   V+KM  +G 
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI 343

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P V+   +LI    +       F+ L +M + G  P+++ Y + I  L    ++  A  
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           + RD+   G  P+   YN++I G C   ++ EA   F+EM   G+  ++ TYN LI G C
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G + +A   +  ++      PDVITY +LI G   AG     + L+  M++ G  P  
Sbjct: 464 KMGKLKEAEE-MFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTI 522

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            TF  LI+G C  +  +     F  M +  + PD  V+ A+I  +    +   AF + KE
Sbjct: 523 NTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKE 581

Query: 666 M 666
           M
Sbjct: 582 M 582



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 173/648 (26%), Positives = 289/648 (44%), Gaps = 63/648 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L+D +++EG  +P+      ++E+L +S   D V    KEM   G+  DK      +   
Sbjct: 18  LYDFMRQEGR-LPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
              G    A+ +F  +     V +  V+++L+    K   +  A +L   M   N+  N 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            TF  LI G+ K   VD A+ L ++M K         ++ ++ GLCK +++E A  + +E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 231 MKGSGITPDFEILSKLITSC--SDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +K +G  PD    S +      SD+G    L L  + I +   ++  T  C+ ++  L  
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT--CSILLNGLCK 254

Query: 286 NGSIDQAYNLLQAMIK-----GE-----------PIADVGVEMLMIFK---GTVSPNTSS 326
            G +++A  +L+++++     GE            I D+   +L I +     + PN  +
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I+   +   +D A    ++M   G   +V  YN LIDG          +++L EME
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E+G KP   +  S+  CLC+   ++ A  ++R M  +G  P      +LI   C  GK  
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA RF  +M + G    IV Y++ I GL  + ++  A E+F  I + G CPDV+ YN +I
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 507 SGL----------------------------------CKAQRVAEAEDLFNEMITKGLIP 532
           SG                                   C  + +   E LFNEM+   L P
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSP 554

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
               YN +I+ + ++G++ +A      M++     PD  TY +LI G    G+  +   L
Sbjct: 555 DRVVYNAMIHCYQETGHVQKAFSLQKEMVDM-GVRPDNKTYNSLILGHLKEGKLSETKDL 613

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
            ++M+ KG  P   T+  LI G C       A V +R M E G  P++
Sbjct: 614 VDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 246/561 (43%), Gaps = 62/561 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS-----CSVDLVEMRLKEMQDYGWGYD 100
           +EEA  + +++K  G  VP+ ++Y+ + + L KS      ++DL     +E    G   D
Sbjct: 187 IEEARCMLNEIKCNGF-VPDGFTYSIIFDGLLKSDDGAGAALDL----YREAIGKGVKID 241

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIE 159
            YT + LL   C  G+ +KA  V   +++HG V  E +++ ++  + + G++D+A   IE
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           +M+   +R N   F  +I  F +   +DKA +   KM   G A     Y+++I G  +  
Sbjct: 302 QMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
                 Q+  EM+ +G  P+      LI     +G++                 L    +
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKI-----------------LEAEMV 404

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +R +V  G                                V PN + ++++I+     GK
Sbjct: 405 LRDMVGRG--------------------------------VLPNANIYNMLIDGSCTVGK 432

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L  AL  F EM++ G    +  YN+LI GLC   +L+E+ E+   +  +G  P   T NS
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +        +    L L   M+  G +P +     LI    K G  ++   F  +M+Q  
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLF-NEMLQMN 551

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD V Y+A I    +   V  A  L +++   G  PD   YN +I G  K  +++E +
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DL ++M  KGLIP   TY+LLI G C   + + A +    MLE     P+V     L  G
Sbjct: 612 DLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLEN-GFLPNVCICNELSTG 670

Query: 580 LCIAGRPDDAIMLWNEMEEKG 600
           L   GR  +A  + +EM   G
Sbjct: 671 LRKDGRLQEAQSICSEMIANG 691


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 265/594 (44%), Gaps = 17/594 (2%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  + N  LEAL ++  +D       EM++      ++Y+ T +++  C +G+ D    
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  E+   G     V +++L+ A  K G V++A  L  RM+   +  +  TF +LI+G  
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  R  +   +  +M + G + +  +Y+ +IG  C+      AL+L+ EM    + P   
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + +  +   EGE+    + I ED     MT+ C     ++           LLQ   +
Sbjct: 363 TYNLIAKALCKEGEMER-AERILEDMLSIGMTVHCGLFNTVVAW---------LLQRTRR 412

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E +  +  EM  + +G + PN       +  L K GK   A+ ++ +    G   N+  
Sbjct: 413 LESVVSITNEM--VTRG-MRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
            N LI GLC    ++E+ ++++ M   G +    T N M R  C+   +  A+ L   M 
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G +P +     L+   C  GK  E F  L  M  EG  PDIV Y   I G    K + 
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A E   ++   G  P+V  YN +I G  +   ++ A D    M + G+ P+  TY  L+
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 649

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
              C +G +++A    S+  E       VI YT +I G C  G+  +A+  + EM  +G 
Sbjct: 650 YWMCHAGLVEEAKTIFSQARENNV-DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +PN++T+  L+    K      A   F  M   G+ PD   +  LI A  SE+N
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI-ARCSEVN 761



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 250/584 (42%), Gaps = 62/584 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            +  L   G ++ A  +FD+++       N YSY  +++ALCK+  VD     L E+   
Sbjct: 191 FLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRA 250

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G      T   L+   C SG+ ++A  +   +   G     V F IL+   ++     + 
Sbjct: 251 GLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEV 310

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M+   +  NE  +  LI    +K    +AL+LFD+M        A  Y++I   
Sbjct: 311 GIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKA 370

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           LCK  ++E A ++  +M   G+T     F  +   +   +   E  + +      R +  
Sbjct: 371 LCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRP 430

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
              L  + MR L   G   +A               VG+    + KG +  N ++ + +I
Sbjct: 431 NDPLMTACMRELCKGGKHQEA---------------VGIWFKTLNKG-LGVNLATSNALI 474

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L +   +  A  + + M   G   +   YN +I G C  +++EE+ +L  +M   GFK
Sbjct: 475 HGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 534

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  FT N++    C    +    +L+ +M+ +G +P +     +I   CK     +A  +
Sbjct: 535 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 594

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP-------------- 497
           LT+++  G  P++  Y+A IGG      +  A++    + ++G  P              
Sbjct: 595 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 654

Query: 498 ---------------------DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
                                 V+ Y I+I G CK  ++ EA   F EM ++G+ P+  T
Sbjct: 655 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 714

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGS---PDVITYTTLI 577
           Y  L+  + KSGN ++A    S++ ++  GS   PD ITY TLI
Sbjct: 715 YTTLMYAYSKSGNSEEA----SKLFDEMVGSGVIPDNITYGTLI 754



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 122/553 (22%), Positives = 233/553 (42%), Gaps = 66/553 (11%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L+R  R   + ++ Q++   +  +SP  + +  LI      G   +A  LFD++  + + 
Sbjct: 301 LARGERFGEVGIVLQEM--EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKM- 357

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW----GYDKYTLTPLLQVYCNSGQFD 118
            P   +YN + +ALCK   ++  E  L++M   G     G     +  LLQ    + + +
Sbjct: 358 KPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ---RTRRLE 414

Query: 119 KALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
             +S+ NE++  G   ++ + +  +    K G+  +A  +  +  +  + +N  T   LI
Sbjct: 415 SVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALI 474

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           HG  +   + +A ++   M   G   D+  Y+++I G CK+ ++E A++L+ +M   G  
Sbjct: 475 HGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 534

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           PD    + L+ +                          CN         G +++ ++LL 
Sbjct: 535 PDLFTFNTLLHA-------------------------YCNL--------GKMEETFHLLD 561

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M K E +                P+  S+  II+   K   +  A     E+   G   
Sbjct: 562 QM-KTEGL---------------QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKP 605

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           NVF+YN LI G   +  +  + + +  M+ +G +PT+ T  S+   +C    V  A  + 
Sbjct: 606 NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 665

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            + R    +  V   T++I+  CK GK +EA  +  +M   G  P+ + Y+  +      
Sbjct: 666 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 725

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              + A +LF ++   G  PD + Y  +I+   +   + +      E+ +  L      Y
Sbjct: 726 GNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMY 785

Query: 538 NLLING----WCK 546
           N+L NG    WC+
Sbjct: 786 NILSNGINAPWCQ 798



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%)

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A D F  + ++G  PS+ T N  +    ++G +D A      M E  + + +  +YT +I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
             LC AG+ D    +  E+   G  P  +T+  L+  LCK  R   A      M++ GM 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 638 PDMFVFVALISAF 650
           P +  F  LI+  
Sbjct: 289 PSVVTFGILINGL 301


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 231/504 (45%), Gaps = 71/504 (14%)

Query: 116 QFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D+AL +F E++   +  + H +++L+  F K G++ +A  +   M    +  N  T  
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+ G  +  ++  AL+LF +M    F   +A +++++ G     +   A++ + EMK S
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121

Query: 235 GITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G+ PD E    L+++ SD G   E   L   +    D+ T  +L +   +I    G   +
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKI----GQTYE 177

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A +L++ ++K       G E          PN  ++ IIIN   K  K++ A  +F +M 
Sbjct: 178 AQSLMKEILK------AGYE----------PNVFTYSIIINCYCKLDKVEEAWEVFMKMI 221

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +  C+ N   +N LI G C +  LE++ +L  EME+ G K T  T N++   LC+     
Sbjct: 222 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK----- 276

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
                                        K G    A      +   G  P IV Y++ I
Sbjct: 277 -----------------------------KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 307

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G  +  R +  L L   + A GC PDV+ YN +ISGLC A RV +A+ LFN M      
Sbjct: 308 QGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACA 362

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P+V T+N LI G C    +++A   L RM      +PD+ T+ T+I   C AG   DA  
Sbjct: 363 PNVTTFNFLIRGLCAQKKVEEARNILDRMT-----APDMTTFNTIILAFCKAGAMHDARE 417

Query: 592 LWNEMEEKGCAPNRITFMALITGL 615
           +  +M + G  PN  T  AL  G+
Sbjct: 418 VMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 225/499 (45%), Gaps = 89/499 (17%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           + D+AL+LF ++    FA +A  Y+V+I G CK  Q+  A+ ++S+MK SG+ P+   ++
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
            L+    + G+++  +K     R++     L  S             ++N+L   ++G  
Sbjct: 65  TLLLGLCEIGQMSSALKLF---REMQAGPFLPTS------------ASHNIL---LRGFF 106

Query: 305 IADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
           +A   +E     K + V P+  S+ I+++ L   G++  A +LF  MT   C  ++  YN
Sbjct: 107 MAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYN 163

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+DG C   ++ ++YE                                A +L++++   
Sbjct: 164 VLMDGYC---KIGQTYE--------------------------------AQSLMKEILKA 188

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G+EP V   +++I   CK  K  EA+     M++   +P+ V ++  I G      ++ A
Sbjct: 189 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 248

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQR-VAEAEDLFNEMITKGLIPSVATYNLLIN 542
           ++LF ++   GC   +V YN +I  LCK +  V  A DLFN++   GL P++ TYN LI 
Sbjct: 249 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 308

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME----- 597
           G+ +  N    +LC    +  E   PDVITY  LI GLC A R +DA  L+N M      
Sbjct: 309 GFSERANDGLRLLC---HMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNV 365

Query: 598 -----------------------EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
                                  ++  AP+  TF  +I   CK      A    + M + 
Sbjct: 366 TTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKH 425

Query: 635 GMKPDMFVFVALISAFLSE 653
           G  P+ +   AL     S 
Sbjct: 426 GFYPNTYTTYALAHGIQSS 444



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 161/321 (50%), Gaps = 8/321 (2%)

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D AL LF+E+       N   YN LI G C   ++ ++  +  +M+ SG  P   T+N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LC    +  AL L R+M+     P    + +L++     G+A+E F+   +M   
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFK---EMKAS 121

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PD+  Y   +  L D  R+  A  LF    A  C PD++ YN+++ G CK  +  EA
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L  E++  G  P+V TY+++IN +CK   +++A     +M+E     P+ +T+ TLI 
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC-VPNAVTFNTLIA 237

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH-FRMMKEKGMK 637
           G C AG  +DAI L+ EME+ GC    +T+  LI  LCK        V  F  ++  G+ 
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 297

Query: 638 PDMFVFVALISAFLSELNPPL 658
           P +  + +LI  F    N  L
Sbjct: 298 PTIVTYNSLIQGFSERANDGL 318



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 184/420 (43%), Gaps = 81/420 (19%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +  G  +PN  +++++I    K G++  A+S+F +M   G + N    N L+ GLC   +
Sbjct: 16  VLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQ 75

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +  + +L REM+   F PT  + N + R          A+   ++M+  G EP ++   +
Sbjct: 76  MSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHI 132

Query: 435 LIKEL--------------------------------CKHGKAMEAFRFLTDMVQEGFLP 462
           L+  L                                CK G+  EA   + ++++ G+ P
Sbjct: 133 LLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 192

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA-------QRV 515
           ++  YS  I     + +V+ A E+F  +    C P+ V +N +I+G CKA       +  
Sbjct: 193 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 252

Query: 516 AEAE-----------------------------DLFNEMITKGLIPSVATYNLLINGWCK 546
           AE E                             DLFN++   GL P++ TYN LI G+ +
Sbjct: 253 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE 312

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
             N    +LC    +  E   PDVITY  LI GLC A R +DA  L+N M    CAPN  
Sbjct: 313 RANDGLRLLC---HMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVT 366

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           TF  LI GLC   +   A    R + ++   PDM  F  +I AF        A EV+K+M
Sbjct: 367 TFNFLIRGLCAQKKVEEA----RNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDM 422



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 67/499 (13%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  LF +V   GL  PN ++YN L+   CK   +        +M+  G   +  T+  
Sbjct: 7   DQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 65

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           LL   C  GQ   AL +F E+    ++      +ILL  F   G   +A E  + M    
Sbjct: 66  LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASG 122

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  + +++ +L+       R+ +A  LF  MT S    D   Y+V++ G CK  Q   A 
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQ 179

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  E+  +G  P                             +V T +++ N   ++   
Sbjct: 180 SLMKEILKAGYEP-----------------------------NVFTYSIIINCYCKL--- 207

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +++A+ +   MI+   +                PN  +F+ +I    K G L+ A+ 
Sbjct: 208 -DKVEEAWEVFMKMIESNCV----------------PNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNS-NRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           LF EM +IGC   +  YN LID LC     +  + +L  ++E +G  PT  T NS+ +  
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
             R +    L L+  M  +G +P V     LI  LC   +  +A R    M      P++
Sbjct: 311 SERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA---PNV 365

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             ++  I GL   K+V+ A    R+I      PD+  +N II   CKA  + +A ++  +
Sbjct: 366 TTFNFLIRGLCAQKKVEEA----RNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 525 MITKGLIPSVATYNLLING 543
           M+  G  P+  T   L +G
Sbjct: 422 MLKHGFYPNTYTTYALAHG 440



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 34/223 (15%)

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           +  ++ D AL LF+++ A    P+   YN++I G CK  ++ +A  +F++M + GL+P+ 
Sbjct: 1   MSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA 60

Query: 535 ATYNLLINGWCKSGNIDQAM-------------------------LCLSRMLE-----KE 564
           +T N L+ G C+ G +  A+                             R +E     K 
Sbjct: 61  STMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKA 120

Query: 565 SG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           SG  PD+ +Y  L+  L  +GR  +A  L++ M    C+P+ +T+  L+ G CK  +   
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYE 177

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A    + + + G +P++F +  +I+ +        A+EV  +M
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 220



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS- 79
           +++S C  +      LI      G++E+A  LF ++++ G C     +YN L+++LCK  
Sbjct: 220 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG-CKATIVTYNTLIDSLCKKR 278

Query: 80  ----CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVD 134
                +VDL      +++  G      T   L+Q +  S + +  L +   +   G   D
Sbjct: 279 GGVYTAVDL----FNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPD 332

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
              ++ L+        V+ A  L   M       N  TF  LI G   + +V++A  + D
Sbjct: 333 VITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEARNILD 389

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +MT    A D   ++ II   CK   +  A ++  +M   G  P+
Sbjct: 390 RMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/592 (27%), Positives = 264/592 (44%), Gaps = 30/592 (5%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT---LTPLLQVYCNSGQFDKALSVFN 125
           ++ LL  L ++   D V+  L++M   G      T   L  L+  Y ++G   KA  +  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 126 EIIDH-----GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
              +H     G    +    LLV   +W   D A +L + M       ++ + CV++ G 
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRW---DDARKLYDEMLAEESGADDYSTCVMVRGL 269

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
             +  V+K L+L +    +G   +A  Y+V+I G C+   +   + L  EM+  G+ P  
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                L++    +G+L  +   + E  +R +     + NS++  L    S  QA  +L+ 
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M                F G   P+  +F  +I+ L ++G++  A  L RE T+     N
Sbjct: 390 M----------------FAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPN 433

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +  Y +LI G C    +  +  LL EM E G  P   T  ++   L     V  AL +  
Sbjct: 434 LSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           KM  +   P      +LI  LCK      A   + +M+++   PD   Y+  I G I  +
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D A ++F  +   G  PDVV YN +I G C+   + EA +  + M   G IP   TY 
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYT 613

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            LI G+ K GNI  A+  L  M+++    P+V+ Y++LI+G C  G  D A  L+  ME 
Sbjct: 614 TLIGGYAKQGNISGALSLLCDMMKRRC-QPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +G  PN IT+  LI  L K D+   A ++F  M      P+ +   +L++  
Sbjct: 673 QGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 272/642 (42%), Gaps = 43/642 (6%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           LG L+      G+  +A  +  + +     +P     N LL  L +    D       EM
Sbjct: 191 LGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEM 250

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEV 151
                G D Y+   +++  C  G  +K L +       G V   VF ++L+  + + G+V
Sbjct: 251 LAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDV 310

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +   L+  M+   +     T+  L+    +K  ++K   L  +M +     +  +Y+ +
Sbjct: 311 GRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSV 370

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEI--WE- 265
           I  LCK +    AL +  +M   G  PD    S LI+    EG   E   L++E   WE 
Sbjct: 371 IDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWEL 430

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           + ++++ T    S++      G +  A NLL  M++               +G  +P+  
Sbjct: 431 NPNLSSYT----SLIHGFCVRGEVIVASNLLVEMME---------------RGH-TPDVV 470

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F  +I+ L+  G++  AL +  +M     + +  +YN LI GLC    L  +  L+ EM
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E    P  +   ++     R + +  A  +   M  +G  P V     +IK  C+ G  
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   ++ M + G +PD   Y+  IGG      +  AL L  D+    C P+VVAY+ +
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G CK      AE LF  M ++GL P+V TY +LI    K   + +A +    ML  + 
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 566 GSPDVITYTTLIDGLC------IAGRPDDAIML---------WNEMEEKGCAPNRITFMA 610
            SP+  T  +L+ GLC      I+      + L         +  +    C P    + A
Sbjct: 711 -SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNA 769

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +I  LC  +    AL     M  KG KPD   F++L+  F S
Sbjct: 770 IIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCS 811



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 164/345 (47%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN   ++++I+   + G +   + L  EM   G +  V  Y  L+  L     LE+   L
Sbjct: 292 PNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASL 351

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM E    P     NS+   LC+ +    AL ++++M   G +P     + LI  LC+
Sbjct: 352 LSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQ 411

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  EA R L +  +    P++  Y++ I G      V +A  L  ++   G  PDVV 
Sbjct: 412 EGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVT 471

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I GL  A +V+EA  +  +M  + L+P    YN+LI+G CK   +  A   +  ML
Sbjct: 472 FGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEML 531

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E+    PD   YTTLIDG       D+A  ++  ME+KG  P+ + + A+I G C+    
Sbjct: 532 EQNV-HPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A+     M++ G  PD F +  LI  +  + N   A  +L +M
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 139/566 (24%), Positives = 229/566 (40%), Gaps = 70/566 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++R L   GLVE+   L +     G CVPN   YN L++  C+   V    + L EM+  
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAG-CVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G      T   L+      G  +K  S+ +E+ +        +++ ++ A  K     +A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++++M       +  TF  LI G  ++ RV +A +L  + T+     + + Y  +I G
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
            C   ++ +A  L  EM   G TPD      LI      G+++  LLV+E    R +   
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
             + N ++  L     +  A NL++ M++                  V P+   +  +I+
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQ----------------NVHPDKYVYTTLID 547

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
             +++  LD A  +F  M Q G   +V  YN +I G C    + E+ E +  M + G  P
Sbjct: 548 GFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIP 607

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             FT  ++     ++ ++ GAL+L+  M  +  +P V   + LI   CK G    A    
Sbjct: 608 DEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF 667

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA----------------------------- 483
             M  +G  P+++ Y+  IG L    +V  A                             
Sbjct: 668 GSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNS 727

Query: 484 ---------------------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
                                L++FR +    C P   AYN II  LC    + EA DL 
Sbjct: 728 MASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLK 787

Query: 523 NEMITKGLIPSVATYNLLINGWCKSG 548
           N+M  KG  P  AT+  L+ G+C  G
Sbjct: 788 NKMANKGYKPDSATFLSLLYGFCSVG 813



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 216/536 (40%), Gaps = 49/536 (9%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G L+  LG  G +E+   L  ++ RE    PN   YN +++ALCK  S     + LK+M 
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEM-RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMF 391

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW---VDEHVFSILLVAFSKWGE 150
             G   D  T + L+   C  G+  +A  +  E     W    +   ++ L+  F   GE
Sbjct: 392 AGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTR--WELNPNLSSYTSLIHGFCVRGE 449

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V  A  L+  M +     +  TF  LIHG V   +V +AL + +KM       DA +Y+V
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRD 268
           +I GLCK K L  A  L  EM    + PD  + + LI        L    K  E  E + 
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           ++   +  N++++     G +++A   +  M K   I                P+  ++ 
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRI----------------PDEFTYT 613

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I    K G +  ALSL  +M +  C  NV  Y++LI+G C     + +  L   ME  
Sbjct: 614 TLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQ 673

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP--WVKHNTLLIKELCK----- 441
           G  P   T   +   L ++  VV A      M +    P  +  H+  L+  LC      
Sbjct: 674 GLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHS--LVTGLCNSMASI 731

Query: 442 -----------HGKA--MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                      HGK   ++ FR L   V +   P    Y+A I  L     +  AL+L  
Sbjct: 732 ISSHCSSTVNLHGKGALLDIFRAL---VNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKN 788

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +   G  PD   +  ++ G C   +  E   +      +  +   + Y +L + +
Sbjct: 789 KMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQY 844



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 5/293 (1%)

Query: 376 EESYELLREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +++ +L  EM  EESG     ++   M R LC    V   L L+      G  P      
Sbjct: 241 DDARKLYDEMLAEESGAD--DYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYN 298

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI   C+ G        L +M  +G LP +V Y   +  L     ++    L  ++   
Sbjct: 299 VLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRER 358

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P+V  YN +I  LCK +  ++A  +  +M   G  P   T++ LI+G C+ G + +A
Sbjct: 359 RLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEA 418

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L R   +   +P++ +YT+LI G C+ G    A  L  EM E+G  P+ +TF ALI 
Sbjct: 419 ERLL-RETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIH 477

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GL    +   AL+    M  + + PD  ++  LIS    +   P A  +++EM
Sbjct: 478 GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/571 (25%), Positives = 259/571 (45%), Gaps = 56/571 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++EA  +  +++ +GL VP+  + NC+L+       V++ E    EM   G   D  +
Sbjct: 168 GKLKEAVNMVVEMQNQGL-VPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++   CN G+  +A    N +++ G+ VD    ++++ AF + G V++      +M 
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  N   F  LI+G  K+  + +A +L ++M + G+  +   +  +I GLCK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 223 MALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            A +L+ ++ +  G  P+    + +I     E +L                         
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL------------------------- 381

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                   ++A  LL  M +               +G V PNT+++  +I+   K G   
Sbjct: 382 --------NRAEMLLSRMQE---------------QGLV-PNTNTYTTLIDGHCKVGNFV 417

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L   M + G   N++ YN +IDGLC    L+E+Y LL ++   G +    T   + 
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              CR+ D   +L    KM   G  P +   T LI   C+  +  E+ R   + V  G +
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLI 537

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P    Y++ I G        LA++LF+ +  HGC PD + Y  +ISGLCK  ++ +A +L
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           ++ M+ KGL P   T   L   +CK  +   A+  L R+ +++     + T  TL+  LC
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW----IRTVNTLVRKLC 653

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
             G+ D A + ++++ +K    NR+T +  +
Sbjct: 654 SEGKLDMAALFFHKLLDKEPNVNRVTLLGFM 684



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 227/508 (44%), Gaps = 31/508 (6%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           R NE   C++++ F +  ++ +A+ +  +M   G        + ++        +E+A  
Sbjct: 152 RANEVMQCMVMN-FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAEN 210

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW----EDRDVNTMTLLCNSIMRI 282
           ++ EM   G++PD      ++ +C + G +  L  E W     +R        C  I+  
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRV--LEAERWLNAMVERGFIVDNATCTLIIDA 268

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +++       M          VEM       ++PN  +F  +IN L K G +  
Sbjct: 269 FCQKGYVNRVVGYFWKM----------VEM------GLAPNVINFTALINGLCKQGSIKQ 312

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL-LREMEESGFKPTHFTLNSMF 401
           A  L  EM + G   NV+ +  LIDGLC     E+++ L L+ +   G+KP   T  +M 
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C+   +  A  L+ +M+ QG  P     T LI   CK G  + A+  +  M +EGF 
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+I  Y+A I GL     +D A  L   +  HG   D V Y I++S  C+      +   
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG---SPDVITYTTLID 578
           FN+M+  G  P + +Y  LI+ +C+   + ++     R+ E+       P   TYT++I 
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKES----ERLFEEAVSLGLIPTKKTYTSMIC 548

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  G    A+ L+  M   GCAP+ IT+ ALI+GLCK  +   A   +  M +KG+ P
Sbjct: 549 GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
                + L   +  + +   A  VL  +
Sbjct: 609 CEVTRLTLAYEYCKKDDSSTAINVLDRL 636



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 190/374 (50%), Gaps = 8/374 (2%)

Query: 283 LVSNGSIDQAYNLLQAMI-----KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           L+ N ++++A  ++Q M+      G+    V + + M  +G V P+T + + +++  +  
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLV-PSTQTLNCVLDVAVGM 202

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +++A ++F EM Q G   +   +  ++   CN  R+ E+   L  M E GF   + T 
Sbjct: 203 GLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATC 262

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             +    C++  V   +    KM   G  P V + T LI  LCK G   +AF  L +MV+
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            G+ P++  ++  I GL      + A  LF + + + G  P+V  Y  +I+G CK  ++ 
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE L + M  +GL+P+  TY  LI+G CK GN  +A   L  ++ KE  SP++ TY  +
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE-LMDLMGKEGFSPNIYTYNAI 441

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC  G  D+A  L N++   G   + +T+  L++  C+      +LV F  M + G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 637 KPDMFVFVALISAF 650
            PD+  +  LIS F
Sbjct: 502 TPDIHSYTTLISTF 515



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 192/430 (44%), Gaps = 41/430 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  ++  L+  LCK  S+      L+EM   GW  + YT T L+   C  G  +KA  +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 124 FNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           F +++  D    + H ++ ++  + K  ++++A  L+ RM +  +  N  T+  LI G  
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K     +A +L D M K GF+ +   Y+ II GLCK   L+ A +L +++   G+     
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ---- 467

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-----LVSNGSIDQAYNLL 296
                    +D    T+L+       D N   +  N ++++     + S  ++   +   
Sbjct: 468 ---------ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQ 518

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M + E + +  V + +I      P   ++  +I    + G   LA+ LF+ M+  GC 
Sbjct: 519 KQMKESERLFEEAVSLGLI------PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   Y  LI GLC  ++L+++  L   M + G  P   T  ++    C++ D   A+N+
Sbjct: 573 PDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE----------GFLPDIVC 466
           + ++       W++    L+++LC  GK   A  F   ++ +          GF+    C
Sbjct: 633 LDRLE---KRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNK--C 687

Query: 467 YSAAIGGLID 476
           Y +   GL+ 
Sbjct: 688 YESNKYGLVS 697



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 9/266 (3%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG    A  L D + +EG   PN Y+YN +++ LCK  S+D     L ++  +G   D  
Sbjct: 413 VGNFVRAYELMDLMGKEGFS-PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T L+ V+C     +++L  FN+++  G+  D H ++ L+  F +  ++ ++  L E  
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEA 531

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +   +KT+  +I G+ +      A++LF +M+  G A D+  Y  +I GLCK  +L
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591

Query: 222 EMALQLYSEMKGSGITP-DFEILSKLITSC-SDEGELTLLVKEIWEDRD-VNTMTLLCNS 278
           + A  LY  M   G++P +   L+     C  D+    + V +  E R  + T+    N+
Sbjct: 592 DDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV----NT 647

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEP 304
           ++R L S G +D A      ++  EP
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKEP 673



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 154/334 (46%), Gaps = 19/334 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G  E+A  LF ++ R     PN ++Y  ++   CK   ++  EM L  MQ+ 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C  G F +A  + + +   G+    + ++ ++    K G +D+A
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ ++    ++ +  T+ +L+    +++  +++L  F+KM K GF  D   Y  +I  
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIST 514

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTM 272
            C+ KQ++ + +L+ E    G+ P  +  + +I      G  +L VK  +   +      
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDII- 330
           ++   +++  L     +D A NL  AM+ KG    +V    L         ++++ +++ 
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 331 ----------INTLLK----DGKLDLALSLFREM 350
                     +NTL++    +GKLD+A   F ++
Sbjct: 635 RLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKL 668


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 187/386 (48%), Gaps = 19/386 (4%)

Query: 264 WEDRDV--NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           W    V  N  TL  N ++ +L  +G  D  Y     M+                 G V 
Sbjct: 6   WAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGA---------------GCV- 49

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PNT ++  ++ +L +  + + A S+FR M   GC  NVF Y+ LI GLC   +++E+ EL
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM + G +P   T  S+   LC+   +  A++L  +M  +G  P      +LI    K
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G   EA+R   +M+++G +P +  Y++ + G            LF+D+   GC P++  
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N ++ G CK   + EA  LF EM + G  P V +YN L+ G C  G   +A   L  M+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
               G PD+++Y  LIDG   +G  D AI L+ E+ + G  P+  ++  +I  LC+  + 
Sbjct: 290 RSGVG-PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALI 647
            AA V F+ M   G  PD  V + L+
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLV 374



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
            T S++ ++  L K G+ D     + +M   GC+ N + Y  L+  LC + R EE+  + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R M   G  P  F+ + +   LCR Q V  A  L+ +M   GH+P V     L+  LCK 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK  EA    + MV  G  PD V Y+  I G      +  A  LF ++   GC P V  Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N ++SG  +       + LF +M+ +G +P++ T+N L++G+CK G++ +A      M  
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-R 254

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
                PDV++Y TL+ G+C  G+P +A  L  EM   G  P+ +++  LI G  K     
Sbjct: 255 SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+  F  + + G++PD F +  +I           AF V K+M
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 216/496 (43%), Gaps = 53/496 (10%)

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           +HG +    ++ LL   +K G  D        M       N  T+  L+    +  R ++
Sbjct: 14  NHGTLS---YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  +F  M   G + +   Y ++I GLC+ ++++ A +L +EM   G  P          
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP---------- 120

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                N +T    S++  L   G + +A +L   M+        
Sbjct: 121 ---------------------NVVTY--GSLLSGLCKMGKLKEAVDLFSRMV-------- 149

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                  ++G   P+   ++++I+   K G +  A  LF EM + GC+  VF YN+L+ G
Sbjct: 150 -------YRGC-PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                       L ++M   G  P  FT N++    C+  D+V A  L  +MR  G  P 
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V     L++ +C  GK  EA R L +M++ G  PDIV Y+  I G      +D A++LF 
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           +I   G  PD  +Y+ II  LC+A +V  A  +F +MI  G  P  A    L+ G C+  
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + ++      M++ E   P +  Y  L+  LC A R DD   +++E+ E+G +P+    
Sbjct: 382 RLTESCELFQAMVKFEC-VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440

Query: 609 MALITGLCKCDRPRAA 624
             ++  L + D   AA
Sbjct: 441 KVILETLRRSDDKEAA 456



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 217/487 (44%), Gaps = 50/487 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN LLE L KS   D V     +M   G   + YT   LL+  C + +F++A SVF  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G       +SIL+    +  +VD+A EL+  M D   + N  T+  L+ G  K  ++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            +A+ LF +M   G   D  +Y+V+I G  K   +  A +L+ EM   G  P     + L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           ++  S +GE    V+ +++D                                        
Sbjct: 199 LSGFSRKGEFGR-VQSLFKD---------------------------------------- 217

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                  M+ +G V PN  +F+ +++   K G +  A  LF EM  +GC  +V  YN L+
Sbjct: 218 -------MLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G+C+  +  E+  LLREM  SG  P   + N +     +   +  A+ L  ++   G E
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P     + +I  LC+ GK   AF    DM+  G  PD       + GL   +R+  + EL
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F+ +    C P +  YN+++  LCKA+R  +  ++F+E+  +G  P V    +++    +
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449

Query: 547 SGNIDQA 553
           S + + A
Sbjct: 450 SDDKEAA 456



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 1/300 (0%)

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +Q+        YN L++ L  S R +  Y    +M  +G  P  +T   + R LC+ Q  
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRF 68

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A ++ R M  QG  P V   ++LI  LC+  K  EA   L +M+  G  P++V Y + 
Sbjct: 69  EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           + GL  + ++  A++LF  +   GC PD V YN++I G  K   + EA  LF EM+ KG 
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           IP+V TYN L++G+ + G   +       ML ++   P++ T+  L+DG C  G   +A 
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDML-RQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L+ EM   GC P+ +++  L+ G+C   +P  A    R M   G+ PD+  +  LI  +
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGY 307



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 195/469 (41%), Gaps = 50/469 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           ++  L+    K  R D     ++ M  +G   +   Y  ++  LC+ ++ E A  ++  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G +P+    S LI                                   L     +D+
Sbjct: 79  AAQGCSPNVFSYSILIAG---------------------------------LCRGQKVDE 105

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  MI G                   PN  ++  +++ L K GKL  A+ LF  M 
Sbjct: 106 AAELLNEMIDG----------------GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  +  +YN LIDG      + E+Y L  EM E G  PT FT NS+     R+ +  
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFG 209

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
              +L + M  QG  P +     L+   CK G  +EA R   +M   G  PD+V Y+  +
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G+    +   A  L R++   G  PD+V+YNI+I G  K+  +  A  LF E+   GL 
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   +Y+ +I+  C++G +  A +    M+   S +PD      L+ GLC   R  ++  
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS-APDAAVVIPLVIGLCRGERLTESCE 388

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           L+  M +  C P    +  L+  LCK  R       F  + E+G  PD+
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 205/462 (44%), Gaps = 51/462 (11%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L+++ R   +     D++ + C  +    G+L+R L      EEA  +F  +  +G C 
Sbjct: 26  VLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG-CS 84

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN +SY+ L+  LC+   VD     L EM D G   +  T   LL   C  G+  +A+ +
Sbjct: 85  PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+ ++  G   D  V+++L+  FSK G++ +A  L E M +        T+  L+ GF +
Sbjct: 145 FSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSR 204

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K    +   LF  M + G   +   ++ ++ G CK   +  A +L+ EM+  G  PD   
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD--- 261

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                          +  N++MR + S G   +A  LL+ MI  
Sbjct: 262 ------------------------------VVSYNTLMRGMCSKGKPHEAQRLLREMI-- 289

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         +  V P+  S++I+I+   K G LD A+ LF E+ + G   + F Y
Sbjct: 290 --------------RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + +ID LC + ++  ++ + ++M  +G  P    +  +   LCR + +  +  L + M  
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
               P +    LL+ +LCK  ++ +      ++ + GF PD+
Sbjct: 396 FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 249/503 (49%), Gaps = 26/503 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           Q+   +S+ N++ D   V  +V+S  IL+    +   V  A  ++ +M    I+ +  TF
Sbjct: 107 QYSTVVSLCNQM-DLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITF 165

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             LI+G   +  + +A+ LF++M + G   D   Y  +I GLCK+    MALQL  +M+ 
Sbjct: 166 NTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE 225

Query: 234 SGITPDFEILSKLITS-CSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
            G  P+    + +I S C D      + LL + +  DR +    +  ++I+    S G +
Sbjct: 226 KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV--DRGIPPDVVTYSTILHGFCSLGHL 283

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++A  L   M+                   V PNT +F I+++ L K+G +  A  +F  
Sbjct: 284 NEATILFNEMVGR----------------NVMPNTVTFTILVDGLCKEGMVSEARCVFEA 327

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           MT+ G   N + YN L+DG C +N+++E+ ++L  M + G  P   + N +    C+R+ 
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A +L+ +M  +   P     + L++ LC+ G+  EA     +M   G LPD++ YS 
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + GL     +D AL+L + +      PD+V YNI+I G+  A ++  A++LF+++   G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P++ TY ++I G  K G  D+A   L R +E +   P+  +Y  +I G         A
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYE-LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTA 566

Query: 590 IMLWNEMEEKGCAPNRITFMALI 612
           I L +EM  K  + +  TF  L+
Sbjct: 567 IRLIDEMVGKRFSADSSTFQMLL 589



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 183/347 (52%), Gaps = 1/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+ N  S +I+IN L +   +  A+S+  +M ++G   +   +N LI+G C    ++E+ 
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAV 182

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            L  EM   G +P   + +++   LC+  +   AL L+RKM  +G +P +   T +I  L
Sbjct: 183 GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSL 242

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     +A   L++MV  G  PD+V YS  + G   +  ++ A  LF ++      P+ 
Sbjct: 243 CKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V + I++ GLCK   V+EA  +F  M  KG  P+  TYN L++G+C +  +D+A   L  
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M++K   +P V +Y  LI+G C   R D+A  L  EM EK   P+ +T+  L+ GLC+  
Sbjct: 363 MVDK-GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           RP+ AL  F+ M   G+ PD+  +  L+       +   A ++LK M
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 180/335 (53%), Gaps = 1/335 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +FK  + P+  +F+ +IN    +G++  A+ LF EM + G   +V  Y+ +I+GLC S  
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGN 212

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              + +LLR+MEE G KP      ++   LC+   V  A++L+ +M  +G  P V   + 
Sbjct: 213 TSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++   C  G   EA     +MV    +P+ V ++  + GL     V  A  +F  +   G
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+   YN ++ G C   ++ EA+ + + M+ KG  P V +YN+LING+CK   +D+A 
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  M EKE  +PD +TY+TL+ GLC  GRP +A+ L+ EM   G  P+ +T+  L+ G
Sbjct: 393 SLLVEMSEKEL-TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           LCK      AL   + M+E  ++PD+ ++  LI  
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 234/518 (45%), Gaps = 19/518 (3%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A     RM   N R +   F   +    KK +    + L ++M   G   +    ++
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           +I  LC+   +  A+ +  +M   GI PD    + LI     EGE+   V    E   R 
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                +  ++++  L  +G+   A  LL+ M +               KG   PN  ++ 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEE---------------KG-CKPNLVAYT 236

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II++L KD  ++ A+ L  EM   G   +V  Y+ ++ G C+   L E+  L  EM   
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T   +   LC+   V  A  +   M  +G EP       L+   C + +  EA
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            + L  MV +G  P +  Y+  I G    +R+D A  L  ++      PD V Y+ ++ G
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC+  R  EA +LF EM + GL+P + TY+ L++G CK G++D+A+  L  M E +   P
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI-EP 475

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D++ Y  LI+G+ IAG+ + A  L++++   G  P   T+  +I GL K      A   F
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R M++ G  P+   +  +I  FL   +   A  ++ EM
Sbjct: 536 RKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 215/481 (44%), Gaps = 19/481 (3%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YS N L+  LC+   V      L +M   G   D  T   L+   C  G+  +A+ +F
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           NE++  G   + + +S ++    K G    A +L+ +M++   + N   +  +I    K 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           + V+ A+ L  +M   G   D   Y  I+ G C    L  A  L++EM G  + P+    
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 244 SKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + L+     EG ++    V E    +         N++M     N  +D+A  +L  M+ 
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG  +P   S++I+IN   K  +LD A SL  EM++     +   
Sbjct: 366 ---------------KG-CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVT 409

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ L+ GLC   R +E+  L +EM  SG  P   T +++   LC+   +  AL L++ M+
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ 469

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               EP +    +LI+ +   GK   A    + +  +G  P I  Y+  I GL+     D
Sbjct: 470 ESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSD 529

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A ELFR +   G  P+  +YN+II G  + Q  + A  L +EM+ K      +T+ +L+
Sbjct: 530 EAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589

Query: 542 N 542
           +
Sbjct: 590 D 590



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 222/484 (45%), Gaps = 57/484 (11%)

Query: 28  MSPGALGF--LI--RCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           + P A+ F  LI  RC+   G ++EA  LF+++ R G   P+  SY+ ++  LCKS +  
Sbjct: 158 IQPDAITFNTLINGRCIE--GEIKEAVGLFNEMVRRG-HQPDVISYSTVINGLCKSGNTS 214

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILL 142
           +    L++M++ G   +    T ++   C     + A+ + +E++D G   + V +S +L
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
             F   G +++A  L   M   N+  N  TF +L+ G  K+  V +A  +F+ MTK G  
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE 334

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            +A  Y+ ++ G C N Q++ A ++   M   G  P                        
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP------------------------ 370

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                 V++  +L N   +       +D+A +LL  M + E                ++P
Sbjct: 371 -----VVHSYNILINGYCK----RRRLDEAKSLLVEMSEKE----------------LTP 405

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +T ++  ++  L + G+   AL+LF+EM   G + ++  Y+ L+DGLC    L+E+ +LL
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           + M+ES  +P     N +   +     +  A  L  K+   G +P ++  T++IK L K 
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G + EA+     M  +GFLP+   Y+  I G +  +    A+ L  ++       D   +
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585

Query: 503 NIII 506
            +++
Sbjct: 586 QMLL 589



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           FL NN I      + L   Y +LR       +P+          + +++     ++L  +
Sbjct: 65  FLSNNSIS---IDDALASFYRMLR----MNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQ 117

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M + G    V    +LI  LC+    + A   L  M + G  PD + ++  I G      
Sbjct: 118 MDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGE 177

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A+ LF ++   G  PDV++Y+ +I+GLCK+   + A  L  +M  KG  P++  Y  
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+  CK   ++ AM  LS M+++    PDV+TY+T++ G C  G  ++A +L+NEM  +
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDR-GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              PN +TF  L+ GLCK      A   F  M +KG +P+ + + AL+  +
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 162/614 (26%), Positives = 281/614 (45%), Gaps = 37/614 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  N   ++ L+ A  K   V    M +  M + G+    +    +L      G+     
Sbjct: 151 CDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVW 210

Query: 122 SVFNE-IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
               E ++    +D    +I+L +    G +  A  +I +M  C++  N  T+  ++H +
Sbjct: 211 FFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLP-NVITYNTILHWY 269

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           VKK R   A+ + + M K+G  +D   Y+++I  LCK K+   A  L   M+G  + PD 
Sbjct: 270 VKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDE 329

Query: 241 EILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
              + LI    DE ++ L +    E         + T T L +   R    NG+ID+A  
Sbjct: 330 CTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCR----NGTIDEALR 385

Query: 295 LLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +L  M + G                 V P+  ++  ++N     G +  A S++  M + 
Sbjct: 386 VLYEMQVAG-----------------VKPSEVTYSAMLN-----GSVHEAFSVYDNMEKY 423

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC  +V+ Y NL+ GLC    L ++ E +  +          TLN++   +C    +  A
Sbjct: 424 GCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEA 483

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L+L  KM      P +   T+L+   C+ GK + A   L  M+++G +PDIV Y+  + G
Sbjct: 484 LDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKG 543

Query: 474 LIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           LI   +V  A  LF++I C  G   D +AYN +++G  KA ++ + E    +M    + P
Sbjct: 544 LIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYP 603

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           + A+YN+L++G  K G++ +++     M+ K    P  +TY  LI GL   G  + A+  
Sbjct: 604 NPASYNILMHGHIKKGHLSRSIYLYKDMVRK-GIKPTNVTYRLLILGLSKHGMIEIAVKF 662

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            ++M  +G  P+R++F  LI    +  R   AL  F  MK   M P    + A+I+  + 
Sbjct: 663 LDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIR 722

Query: 653 ELNPPLAFEVLKEM 666
           +     + +VL++M
Sbjct: 723 KNWLQHSCDVLRDM 736



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 249/511 (48%), Gaps = 25/511 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA  ++D +++ G C P+ Y+Y  LL  LCK   +   +  +  +       D+ T
Sbjct: 408 GSVHEAFSVYDNMEKYG-CSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKT 466

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
           L  LL   CN G  D+AL +  +++   ++ D H ++ILL  F + G++  A  L++ M 
Sbjct: 467 LNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMML 526

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQL 221
           +  +  +  T+  L+ G +K+ +V  A  LF ++  K G  +D   Y+ ++ G  K  +L
Sbjct: 527 EKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKL 586

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
                   +M  + + P+    + L+     +G L+   + I+  +D             
Sbjct: 587 HKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLS---RSIYLYKD------------- 630

Query: 282 ILVSNG--SIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKD 337
            +V  G    +  Y LL   +    + ++ V+ L  M+ +G + P+  SFD++IN   + 
Sbjct: 631 -MVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEG-IYPDRLSFDVLINAFSEK 688

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            ++  AL LF  M  +    +   Y+ +I+GL   N L+ S ++LR+M ESG +P H   
Sbjct: 689 SRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++    CR  D+ GA  L  +M   G  P    ++ +++ L K GK  E       +++
Sbjct: 749 IALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIR 808

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +P I  ++  + GL    ++  AL L   + + G   DVV YN++I+GLCK Q V++
Sbjct: 809 AGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSD 868

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           A +L+ EM +KGL P+V TY  L      +G
Sbjct: 869 ALELYEEMKSKGLRPNVTTYTTLTEAIYGTG 899



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 281/638 (44%), Gaps = 93/638 (14%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           T   +L  Y   G+F  A+ V  ++  +G   D + ++I++    K      A  L++RM
Sbjct: 261 TYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRM 320

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
              N+  +E T+  LI GF  +S++  A+ +F++M + G     A Y  +I G C+N  +
Sbjct: 321 RGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTI 380

Query: 222 EMALQLYSEMKGSGITPDFEILSKLIT-------SCSDEGELTLLVKEIWEDRDVNTMTL 274
           + AL++  EM+ +G+ P     S ++        S  D  E      +++  R  N +  
Sbjct: 381 DEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYR--NLLRG 438

Query: 275 LC---------------------------NSIMRILVSNGSIDQAYNLLQAMI------- 300
           LC                           N+++  + ++GS+D+A +L + M+       
Sbjct: 439 LCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPD 498

Query: 301 -------------KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                        KG+ +  V +  +M+ KG V P+  ++  ++  L+K+G++  A  LF
Sbjct: 499 IHTYTILLSGFCRKGKIVPAVILLQMMLEKGLV-PDIVTYTCLLKGLIKEGQVKAASYLF 557

Query: 348 REMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           +E+  + G   +   YN++++G   + +L +    + +M ++   P   + N +     +
Sbjct: 558 QEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIK 617

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
           +  +  ++ L + M  +G +P      LLI  L KHG    A +FL  MV EG  PD + 
Sbjct: 618 KGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLS 677

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   I    +  R+  AL+LF  +      P    Y+ +I+GL +   +  + D+  +M+
Sbjct: 678 FDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMV 737

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLC----------------------LSRMLEKE 564
             GL P    Y  LIN  C+ G+I+ A                         LS+  + E
Sbjct: 738 ESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVE 797

Query: 565 SG------------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            G             P + T+TTL+ GLC   +  DA+ L + ME  G   + +T+  LI
Sbjct: 798 EGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLI 857

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           TGLCK      AL  +  MK KG++P++  +  L  A 
Sbjct: 858 TGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAI 895



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 247/609 (40%), Gaps = 85/609 (13%)

Query: 104 LTPLLQVYCNSGQF-------DKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           L  +  +YC + Q         +A+S+   +   G+    VFS LL              
Sbjct: 100 LERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAVFSSLLCT------------ 147

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            I R D      N   F +L++ +VK+ RV  A      M   GF + A   + ++  L 
Sbjct: 148 -ISRCDS-----NPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALV 201

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           +  + +       E        D    + ++ S   EG L      I + +  +   ++ 
Sbjct: 202 EIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVIT 261

Query: 277 -NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK------------------ 317
            N+I+   V  G    A  +L+ M K    ADV    +MI K                  
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMR 321

Query: 318 -GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              ++P+  +++ +I     + K+ LA+ +F EM + G   ++  Y  LIDG C +  ++
Sbjct: 322 GDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTID 381

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+  +L EM+ +G KP+  T ++M         V  A ++   M   G  P V     L+
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLL 436

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + LCK G  ++A  F++ +V      D    +A + G+ +   +D AL+L   +      
Sbjct: 437 RGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFI 496

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD+  Y I++SG C+  ++  A  L   M+ KGL+P + TY  L+ G  K G +  A   
Sbjct: 497 PDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYL 556

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGR-----------------PDDA---------- 589
              ++ KE    D I Y ++++G   AG+                 P+ A          
Sbjct: 557 FQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHI 616

Query: 590 --------IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                   I L+ +M  KG  P  +T+  LI GL K      A+     M  +G+ PD  
Sbjct: 617 KKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRL 676

Query: 642 VFVALISAF 650
            F  LI+AF
Sbjct: 677 SFDVLINAF 685


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 253/516 (49%), Gaps = 34/516 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+  YC  G+   A  V       G  +   ++ L+  + + G +D A  LI  M    +
Sbjct: 130 LVAGYCRDGRLADAERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---V 186

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+  ++ G     + ++A +L  +M ++    +   +   I   C+N  L+ A+Q
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  +M   G TPD  I S LI   S++G +   +  +      NTM    N++       
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL------NTMLCKPNTV------- 293

Query: 287 GSIDQAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                 YN  L+ +   E   D+G  M  + +   SPN ++F ++I++L ++  +D A+ 
Sbjct: 294 -----CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +  +M + GC  +   YN +I+ L    R++++  LL  M     KP     N++ +  C
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFC 405

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           R +    A  L+ +M  +   P ++    +LI  LC++G    A +    M +    PDI
Sbjct: 406 RAERWHDASELIAQM-FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDI 464

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V YS+ + G  +   V++A++LFR +    C PD+ +YN ++ GLC+A R  +A +L  E
Sbjct: 465 VTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ K   P+  T+N+LIN  C+ G +D+A+  L +M    S +PD+ TY  LI+G    G
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPDIFTYNALINGFSEQG 580

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           R DDA+ L + M    C P+ I++ + + GLC+ +R
Sbjct: 581 RLDDALKLLSTM---SCKPDAISYNSTLKGLCRAER 613



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 223/502 (44%), Gaps = 48/502 (9%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            L+ G+ +  R+  A ++      +G A++   Y  +I G C++ +L+ AL+L + M   
Sbjct: 129 TLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLDDALRLIASMP-- 185

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN----------SIMRILV 284
            + PD    + ++          L + + WE+ +     ++ N          + +R   
Sbjct: 186 -VAPDTYTYNTVLKG--------LCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFC 236

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG +D+A  LL  M +     DV +                +  +IN   + G +D AL
Sbjct: 237 QNGLLDRAVQLLDQMPRYGCTPDVVI----------------YSTLINGFSEQGHVDQAL 280

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L   M    C  N   YN  + GLC + R E+  EL+ EM   G  P   T + +   L
Sbjct: 281 DLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A+ ++ +M   G EP   +  ++I  L + G+  +A R L  MV +   PD 
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDA 394

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + ++A + G    +R   A EL   +    C    + +NI+I  LC+   V  A  +F +
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 454

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M      P + TY+ L+NG+ + G ++ A+     M  K    PD+ +Y  ++ GLC A 
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK----PDIFSYNAVLKGLCRAA 510

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R +DA  L  EM  K C PN +TF  LI  LC+      A+     M   G  PD+F + 
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           ALI+ F  +     A ++L  M
Sbjct: 571 ALINGFSEQGRLDDALKLLSTM 592



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 228/477 (47%), Gaps = 29/477 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ Y+YN +L+ LC +   +  E  + EM       ++ T    ++ +C +G  D+A+ 
Sbjct: 187 APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 246

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +++  +G   D  ++S L+  FS+ G VD+A +L+  M     + N   +   + G  
Sbjct: 247 LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLC 303

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R +   +L  +M + G + + A + ++I  LC+N  ++ A+++  +M+  G  PD  
Sbjct: 304 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 363

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMI 300
             + +I S S+ G +   +      R +N+M    +++             +N +L+   
Sbjct: 364 NYNIIINSLSERGRVDDAL------RLLNSMVCKPDAL------------GFNAVLKGFC 405

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           + E   D    +  +F+        +F+I+I+ L ++G ++ A  +F +M +  C  ++ 
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y++L++G      +E + +L R M     KP  F+ N++ + LCR      A  L+ +M
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +   P      +LI  LC+ G    A   L  M   G  PDI  Y+A I G  +  R+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           D AL+L   +    C PD ++YN  + GLC+A+R  +AE+L  EM+     P+  T+
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 199/442 (45%), Gaps = 27/442 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  ++   + + C++  +D     L +M  YG   D    + L+  +   G  D+AL
Sbjct: 221 CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 280

Query: 122 SVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            + N ++     V  +     L    +W ++    EL+  M       NE TF +LI   
Sbjct: 281 DLLNTMLCKPNTVCYNAALKGLCIAERWEDIG---ELMAEMVRKGCSPNEATFSMLISSL 337

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + + VD A+++ ++M K G   D   Y++II  L +  +++ AL+L + M        F
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGF 397

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             + K         + + L+ +++ D D   + +  N ++ +L  NG ++ A  + + M 
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFRD-DCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                   +P+  ++  ++N   + G +++A+ LFR M    C  ++F
Sbjct: 457 RYR----------------CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIF 497

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN ++ GLC + R E++ EL+ EM      P   T N +   LC++  V  A+ ++ +M
Sbjct: 498 SYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P +     LI    + G+  +A + L+ M  +   PD + Y++ + GL   +R 
Sbjct: 558 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERW 614

Query: 481 DLALELFRDICAHGCCPDVVAY 502
             A EL  ++  + C P+ V +
Sbjct: 615 QDAEELVAEMLRNKCTPNEVTF 636



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 55/431 (12%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG--------------------- 60
           +++RC  +       IR     GL++ A  L DQ+ R G                     
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 61  ----------LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
                     LC PN   YN  L+ LC +   + +   + EM   G   ++ T + L+  
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C +   D A+ V  ++  +G   + V ++I++ + S+ G VD A  L+  M     + +
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM---VCKPD 393

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              F  ++ GF +  R   A +L  +M +         ++++I  LC+N  +  A Q++ 
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 453

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M     TPD    S L+   S++G + + ++                 + R +     I
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ-----------------LFRSMPCKPDI 496

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                +L+ + +     D G  +  +      PN  +F+I+IN+L + G +D A+ +  +
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   ++F YN LI+G     RL+++ +LL  M     KP   + NS  + LCR + 
Sbjct: 557 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAER 613

Query: 410 VVGALNLVRKM 420
              A  LV +M
Sbjct: 614 WQDAEELVAEM 624



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 35/357 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+   L  ++ R+G C PN  +++ L+ +LC++  VD     L++M+ YG   D      
Sbjct: 309 EDIGELMAEMVRKG-CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 367

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM--DDC 164
           ++      G+ D AL + N ++     D   F+ +L  F +      A ELI +M  DDC
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCKP--DALGFNAVLKGFCRAERWHDASELIAQMFRDDC 425

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
              L E TF +LI    +   V+ A Q+F++M +     D   Y  ++ G  +   +E+A
Sbjct: 426 P--LIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA 483

Query: 225 LQLYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +QL+  M      PD      +L  L  +   E    L+ + + +D   N +T   N ++
Sbjct: 484 IQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF--NILI 538

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +D+A  +L+ M       + G           +P+  +++ +IN   + G+L
Sbjct: 539 NSLCQKGLVDRAIEVLEQM------PNYG----------STPDIFTYNALINGFSEQGRL 582

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           D AL L   M+   C  +   YN+ + GLC + R +++ EL+ EM  +   P   T 
Sbjct: 583 DDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 8/234 (3%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RA R      L   + +  C +       LI  L   GLV  A  +F+Q+ R   C P+ 
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRY-RCTPDI 464

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y+ LL    +     LVE+ ++  +      D ++   +L+  C + +++ A  +  E
Sbjct: 465 VTYSSLLNGFSEQ---GLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 521

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++      +E  F+IL+ +  + G VD+A E++E+M +     +  T+  LI+GF ++ R
Sbjct: 522 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 581

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +D AL+L   M+      DA  Y+  + GLC+ ++ + A +L +EM  +  TP+
Sbjct: 582 LDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 632



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 35/199 (17%)

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++ NI+I  LC  +R+A+AE + + +       +V ++N L+ G+C+ G +  A   L  
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAADAV-SHNTLVAGYCRDGRLADAERVLG- 148

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME---------------------- 597
              + +G+ +V+TYT LIDG C +GR DDA+ L   M                       
Sbjct: 149 -AARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWE 207

Query: 598 ----------EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                        C PN +TF   I   C+      A+     M   G  PD+ ++  LI
Sbjct: 208 EAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267

Query: 648 SAFLSELNPPLAFEVLKEM 666
           + F  + +   A ++L  M
Sbjct: 268 NGFSEQGHVDQALDLLNTM 286


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 169/667 (25%), Positives = 287/667 (43%), Gaps = 38/667 (5%)

Query: 4   ILSRARRIAPLRVLAQDVV----KSR------------CFMSPGALGFLIRCLGSVGLVE 47
           IL RAR   P R + +++     KS             C  +P     LIR     G+++
Sbjct: 81  ILVRARMYDPARHILKELSLMSGKSSFVFGALMATYRLCNSNPSVFDILIRVYLREGMIQ 140

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           ++  +F  +   G   P+ Y+ N +L ++ KSC    V   LKEM       D  T   L
Sbjct: 141 DSLEIFRLMGLYGFN-PSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNIL 199

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           + V C  G F K+  +  ++   G+    V ++ +L  + K G    A EL++ M+   +
Sbjct: 200 INVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGV 259

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+ +LIH   + +R  K   L   M K     +   Y+ ++ G     ++ +A Q
Sbjct: 260 NADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQ 319

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILV 284
           L +EM   G++P+    + LI     EG     +K   + E + +    +    ++  L 
Sbjct: 320 LLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLC 379

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            N   D A                G  M M   G V     ++  +I+ L K+G LD A+
Sbjct: 380 KNAEFDLAR---------------GFYMRMKRNG-VCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +  EM++ G   ++  Y+ LI+G C   RL+ + E++  +   G  P     +++    
Sbjct: 424 VMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           CR   +   + +   M ++G+ P      +L+  LCK GK  EA  F+  M  +G LP+ 
Sbjct: 484 CRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNA 543

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V +   I G         A  +F ++   G  P    Y  ++ GLCK   +  AE     
Sbjct: 544 VSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS 603

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +            N LI   CKSGN+D+A+     M+++ S  PD  TYT+LI GLC  G
Sbjct: 604 LQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR-SILPDSFTYTSLISGLCRKG 662

Query: 585 RPDDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           +   AI+   E E +G   PN++ +   + G+ K  + +A     + M + G+  D+   
Sbjct: 663 KTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTT 722

Query: 644 VALISAF 650
            A+I  +
Sbjct: 723 NAMIDGY 729



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 245/600 (40%), Gaps = 96/600 (16%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE------LIER 160
           L++VY   G    +L +F  +  +G+ +  V++   +     G + K+CE       ++ 
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAI----LGSIVKSCEDVSVWSFLKE 183

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M    I  +  TF +LI+    +    K+  L  KM KSG+A     Y+ ++   CK  +
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
            + A++L   M   G+                             + DV T  +L + + 
Sbjct: 244 FKAAIELLDHMNLKGV-----------------------------NADVCTYNMLIHDLC 274

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R   SN S  + Y LL+ M K                  + PN  +++ ++N    +GK+
Sbjct: 275 R---SNRSA-KGYLLLRDMRKR----------------MIHPNEVTYNTLLNGFSNEGKV 314

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
            +A  L  EM   G   N   +N LIDG  +    +E+ ++   ME  G   T  +   +
Sbjct: 315 LIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVL 374

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LC+  +   A     +M+  G        T +I  LCK+G   EA   L +M ++G 
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALE-------------------LFRDICAHGC------ 495
            PDIV YSA I G   + R+  A E                   L  + C  GC      
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR 494

Query: 496 ----------CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
                      PD   +N++++ LCKA +VAEAE+    M + G++P+  +++ LING+ 
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
            SG   +A      M  K    P   TY +L+ GLC  G    A      ++    A + 
Sbjct: 555 SSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDT 613

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +    LIT +CK      A+  F  M ++ + PD F + +LIS    +    +A    KE
Sbjct: 614 VMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKE 673



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 160/700 (22%), Positives = 294/700 (42%), Gaps = 64/700 (9%)

Query: 28   MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
            +SP  + F  LI    S G  +EA  +F  ++ +GL +    SY  LL+ LCK+   DL 
Sbjct: 329  LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL-IGTEVSYGVLLDGLCKNAEFDLA 387

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
                  M+  G    + T T ++   C +G  D+A+ + NE+   G +D  +  +S L+ 
Sbjct: 388  RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDG-IDPDIVTYSALIN 446

Query: 144  AFSKWGEVDKACELIERMD----------------DC--------NIRLNEK-------- 171
             F + G +  A E++ R+                 +C         IR+ E         
Sbjct: 447  GFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTP 506

Query: 172  ---TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
               TF VL+    K  +V +A +    MT  G   +A  +D +I G   + +   A  ++
Sbjct: 507  DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566

Query: 229  SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSN 286
             EM   G  P F     L+      G L    K +   ++V     T++CN+++  +  +
Sbjct: 567  DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626

Query: 287  GSIDQAYNLLQAMIKGEPIADV-------------GVEMLMIF-------KGTVSPNTSS 326
            G++D+A +L   M++   + D              G  ++ I        +G + PN   
Sbjct: 627  GNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVM 686

Query: 327  FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +   ++ + K G+        ++M ++G  ++V   N +IDG     ++E++++LL EM 
Sbjct: 687  YTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMG 746

Query: 387  ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                 P   T N +     +R+ V  +  L R M + G  P       +I  +C+     
Sbjct: 747  NQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLE 806

Query: 447  EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
               + L   +  G   D   ++  I        ++ A ++   + + G   D    + I+
Sbjct: 807  IGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIV 866

Query: 507  SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            S L +  R  E+  + +EM  +G+ P    Y  L+NG C+ G+I  A +    M+  +  
Sbjct: 867  SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKIC 926

Query: 567  SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             P+V   + ++  L   G+ D+A +L   M +    P   +F  L+   CK      AL 
Sbjct: 927  PPNVAE-SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALE 985

Query: 627  HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               +M   G+K D+  +  LI+   ++ +  +AFE+ +EM
Sbjct: 986  LRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 181/397 (45%), Gaps = 7/397 (1%)

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ--AMIKGEPIADVGVEML 313
           L  +VK+   D D + + L C +   ILV     D A ++L+  +++ G+     G   L
Sbjct: 57  LKWVVKQPGLDTD-HIVQLFCITT-HILVRARMYDPARHILKELSLMSGKSSFVFGA--L 112

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M      + N S FDI+I   L++G +  +L +FR M   G   +V+  N ++  +  S 
Sbjct: 113 MATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSC 172

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
                +  L+EM +    P   T N +   LC       +  L++KM   G+ P +    
Sbjct: 173 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYN 232

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            ++   CK G+   A   L  M  +G   D+  Y+  I  L    R      L RD+   
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKR 292

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P+ V YN +++G     +V  A  L NEM+T GL P+  T+N LI+G    GN  +A
Sbjct: 293 MIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEA 352

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            L +  M+E +      ++Y  L+DGLC     D A   +  M+  G    RIT+  +I 
Sbjct: 353 -LKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GLCK      A+V    M + G+ PD+  + ALI+ F
Sbjct: 412 GLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGF 448



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 261/615 (42%), Gaps = 56/615 (9%)

Query: 10   RIAPLRVLAQDVVK-SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
            R+  L+   + V +  R  +SP  + +  LI     +G ++E   +++ +  EG   P++
Sbjct: 450  RVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEG-NTPDH 508

Query: 67   YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +++N L+ +LCK+  V   E  ++ M   G   +  +   L+  Y +SG+  KA SVF+E
Sbjct: 509  FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDE 568

Query: 127  IIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
            +   G       +  LL    K G +  A + ++ + +    ++      LI    K   
Sbjct: 569  MTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGN 628

Query: 186  VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG-ITPDFEILS 244
            +DKA+ LF +M +     D+  Y  +I GLC+  +  +A+    E +  G + P+     
Sbjct: 629  LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPN----- 683

Query: 245  KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
            K++ +C  +G   +     W+        +    + R +V+  ++   Y+    M K E 
Sbjct: 684  KVMYTCFVDG---MFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYS---RMGKIEK 737

Query: 305  IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
              D+  EM    +G   PN ++++I+++   K   +  +  L+R M   G + +     +
Sbjct: 738  THDLLFEMGNQNQG---PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYS 794

Query: 365  LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            +I G+C SN LE   ++L+     G +    T N +    C   ++  A ++V  M   G
Sbjct: 795  IILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLG 854

Query: 425  HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                      ++  L ++ +  E+   L +M ++G  P+   Y   + GL  +  +  A 
Sbjct: 855  ISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAF 914

Query: 485  ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT-------- 536
             +  ++ AH  CP  VA + ++  L K  +  EA  L   M+   L+P++A+        
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLF 974

Query: 537  ---------------------------YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
                                       YN+LI G C  G++  A      M +++    +
Sbjct: 975  CKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM-KRDGFLAN 1033

Query: 570  VITYTTLIDGLCIAG 584
            V TY  L+ G+   G
Sbjct: 1034 VTTYKALVGGILSQG 1048


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/584 (26%), Positives = 265/584 (45%), Gaps = 27/584 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P  Y+YN L++   +    +L       +   G G D  +   L+  +   G+ DKA  
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F ++I+     + V ++ L+    K  E+ K+  ++E+M D  IR N KT+  LI+G+ 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
                 +++++F +M+ SG        +  I  LC++ +++ A  ++  M   G  P+  
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S L+   + EG    +                 NS++ ++VS G +   +     +I 
Sbjct: 299 SYSTLLHGYAAEGCFANM-----------------NSLVNLMVSKGIVPN-HRFFNILIN 340

Query: 302 GEPIADVGVEMLMIF-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                 +  + ++IF     KG + P+T +F  +I++L + G+LD AL  F  M  IG  
Sbjct: 341 AYARCGMMDKAMLIFEDMQNKGMI-PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT-LNSMFRCLCRRQDVVGALN 415
            +  +Y  LI G CN   L ++ EL+ EM      P      +S+   L +   V    +
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKD 459

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           ++  M   G  P V     L++  C  G   EAF  L  M   G  P+   Y   + G  
Sbjct: 460 IMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 519

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+D AL +FRD+   G  P  V YNII+ GL +A+R   A+ +F+EMI  G   S+ 
Sbjct: 520 KNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQ 579

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY +++ G C++   D+A + L ++        D+IT+  +I  +   GR  +A  L+  
Sbjct: 580 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF-DIITFNIVISAMLKVGRRQEAKELFAA 638

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   G  P   T+  +I+ L K +    A   F  +++ G  PD
Sbjct: 639 ISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 237/571 (41%), Gaps = 88/571 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G V++A  LF ++  + +  P+  +YN L++ LCK+  +   E  L++M D 
Sbjct: 163 LIDGFSKEGEVDKAYELFYKMIEQSVS-PDVVTYNSLIDGLCKTKEMVKSERVLEQMVDA 221

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---------------------- 133
           G   +  T   L+  Y  +G + +++ VF E+   G +                      
Sbjct: 222 GIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEA 281

Query: 134 ----DEHV----------FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
               D  V          +S LL  ++  G       L+  M    I  N + F +LI+ 
Sbjct: 282 KDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINA 341

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + +   +DKA+ +F+ M   G   D   +  +I  LC+  +L+ AL  ++ M   G+ P 
Sbjct: 342 YARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPS 401

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             +   LI  C + GEL                                  +A  L+  M
Sbjct: 402 EAVYRCLIQGCCNHGELV---------------------------------KAKELISEM 428

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                K    P    F  IIN L K+G++     +   M Q G   NV
Sbjct: 429 MN---------------KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNV 473

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +N+L++G C    +EE++ LL  M   G +P  +   ++    C+   +  AL + R 
Sbjct: 474 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 533

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +P      +++  L +  +   A +   +M++ G    I  Y   +GGL     
Sbjct: 534 MLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNC 593

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            D A  L   + A     D++ +NI+IS + K  R  EA++LF  + T GL+P+V TYNL
Sbjct: 594 TDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNL 653

Query: 540 LINGWCKSGNIDQA-MLCLSRMLEKESGSPD 569
           +I+   K  + ++A  L +S  +EK   +PD
Sbjct: 654 MISNLIKEESYEEADNLFIS--VEKSGRAPD 682



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 217/525 (41%), Gaps = 102/525 (19%)

Query: 189 ALQLFDKMTK---SGFASDAAM---YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           A++LF +M +      A+DA     Y+++I    +  + E+AL ++  +  +G+ PD   
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI   S EGE                                 +D+AY L   MI+ 
Sbjct: 160 YNTLIDGFSKEGE---------------------------------VDKAYELFYKMIEQ 186

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                           +VSP+  +++ +I+ L K  ++  +  +  +M   G   N   Y
Sbjct: 187 ----------------SVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTY 230

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N+LI G   +   +ES  + +EM  SG  P     NS    LCR   +  A ++   M +
Sbjct: 231 NSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVL 290

Query: 423 QGHEP-WVKHNTLLIKELCKHGKAMEA-----FRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +G +P  + ++TLL      HG A E         +  MV +G +P+   ++  I     
Sbjct: 291 KGPKPNIISYSTLL------HGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 344

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +D A+ +F D+   G  PD V +  +IS LC+  R+ +A   FN M+  G+ PS A 
Sbjct: 345 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAV 404

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKE-------------------------------- 564
           Y  LI G C  G + +A   +S M+ K+                                
Sbjct: 405 YRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM 464

Query: 565 ---SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P+V+T+ +L++G C+ G  ++A  L + M   G  PN   +  L+ G CK  R 
Sbjct: 465 VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 524

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             AL  FR M  KG+KP   ++  ++           A ++  EM
Sbjct: 525 DDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/382 (20%), Positives = 168/382 (43%), Gaps = 26/382 (6%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
              LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHM 393

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGE 150
            D G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G 
Sbjct: 394 VDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGR 453

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +  ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 513

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPT-SVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 271 TMTLLCNS---IMRILVSNGSIDQAYNLLQ-------------------AMIKGEPIADV 308
             T+   +   ++  L  N   D+A  LL+                   AM+K     + 
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                 I    + P   +++++I+ L+K+   + A +LF  + + G   +  L N+++  
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRM 692

Query: 369 LCNSNRLEESYELLREMEESGF 390
           L     + ++   L  ++E+  
Sbjct: 693 LLKKAEVAKASNYLSIIDENNL 714


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 268/581 (46%), Gaps = 29/581 (4%)

Query: 27  FMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           F+     G LI    + G V++A  + D + + GL + N    N L+   CK   V+   
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKM-NTVICNSLINGYCKLGHVNKAA 416

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVA 144
             L  M+D+    D Y    LL  +C    F KA  + +E+ + G V+  V  ++ LL  
Sbjct: 417 EVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKG-VNFTVVTYNTLLKN 475

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G V+ A  +   M    +  NE T+C L+  F K    D+A+ ++      GF   
Sbjct: 476 LFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKS 535

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKE 262
             +Y+ +I G CK ++L  A +++ +MK  G  PD      LI      G L   L +K+
Sbjct: 536 ITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           + E   +++ T + NS++  +  +  + +   LL  M   E                +SP
Sbjct: 596 MSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE----------------LSP 639

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +I      G +D A + + +M   G   N+ + + ++  L    +++E+  +L
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 383 REMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            ++ +      H     + +   R    Q +V +    + M +      V +  + I  L
Sbjct: 700 HQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFG-KKAMSIPISNNIVYN--IAITGL 756

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     +  R L+D++ +GF PD   Y + I     + +V+ A  L  D+   G  P++
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN +I+GLCK+  +  A  LFN++  KGL P+V TYN LI+G+CK G   +A+    +
Sbjct: 817 VVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDK 876

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           M E E   P  ITY+TLI GL + G+ + ++ L NEM + G
Sbjct: 877 MRE-EGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 181/794 (22%), Positives = 326/794 (41%), Gaps = 147/794 (18%)

Query: 1   MASILSRARRIAPLRVLAQDVVK------------------SRCF-MSPGALGFLIRCLG 41
           +  ILSRAR    +RV   ++V                    R F  SP     +++   
Sbjct: 138 IVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFA 197

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
             G+ + A  +FD + + G  VP+  S N LL  L ++       +  ++M   G   D 
Sbjct: 198 EKGMTKFALCVFDNMGKCGR-VPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDI 256

Query: 102 YTLTPLLQVYCNSGQFDKALS---------------VFNEIIDHGWV------------- 133
           ++ T ++  YC  G+ D+A +                +N +ID G+V             
Sbjct: 257 FSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID-GYVSLGDVCGAKKVLA 315

Query: 134 ---------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                    +   +++L+  + K G++++A +LI  M + N+ ++E  + VLIH +    
Sbjct: 316 LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAG 375

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           RVD AL++ D M K G   +  + + +I G CK   +  A ++   MK   + PD    +
Sbjct: 376 RVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435

Query: 245 KLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            L+     + +     K  +   ++ VN   +  N++++ L   G ++ A ++   M   
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM--- 492

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         K  V+PN  ++  +++   K G  D A+ ++++    G  +++ LY
Sbjct: 493 -------------HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL------ 416
           N +I G C   +L ++ E+  +M+E GF P   T  ++    C+  ++V AL L      
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSER 599

Query: 417 -----------------------------VRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
                                        + +M+ +   P V     LI   C  G   +
Sbjct: 600 DGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDK 659

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD---LALELFRDI---CAHGCCPDV-- 499
           A+     M+ +G  P+I+  S  +  L    ++D   L L    DI    AH    ++  
Sbjct: 660 AYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPK 719

Query: 500 ---------------------------VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
                                      + YNI I+GLCK++ + +   + ++++ KG  P
Sbjct: 720 SDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCP 779

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
              TY  LI+     G +++A  CL   +      P+++ Y  LI+GLC +G  D A  L
Sbjct: 780 DNYTYCSLIHACSAVGKVNEA-FCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +N++  KG +P  +T+  LI G CK  R   AL     M+E+G+ P    +  LI     
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898

Query: 653 ELNPPLAFEVLKEM 666
           E     +  +L EM
Sbjct: 899 EGKSEQSVGLLNEM 912



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV +Y  I+  L +A+   E     NE++            L  N +  S   D+    
Sbjct: 130 PDVSSYCKIVHILSRARMYKEVRVYLNELVV-----------LCKNNYIASAVWDE---- 174

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L  +  + S SP V  +  ++      G    A+ +++ M + G  P+  +  +L++ L 
Sbjct: 175 LVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +      AL+ +  M   G+ PD+F +  +++A+  E     AF  +KEM
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM 282



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQD 94
           LI  L   G ++ A  LF+++ R+GL  P   +YN L++  CK   + + +E++ K M++
Sbjct: 822 LINGLCKSGNLDRARRLFNKLARKGLS-PTVVTYNTLIDGYCKGGRTTEALELKDK-MRE 879

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
            G      T + L+      G+ ++++ + NE++  G     +  ++  A+ KW
Sbjct: 880 EGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLVARAYVKW 933


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 294/639 (46%), Gaps = 36/639 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V N    N LLE  C++   D  
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV-NIIIANHLLEGFCEAKRTDEA 165

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++ + LL+  C+ G+  +A  +   + + G V   +   ++ +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 225

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M     
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 285

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   Y+ +I G     Q + A++++ EM+   I PD   LS L+ S    G+      
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK------ 339

Query: 262 EIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-----LMI 315
            I E RDV +TM +           N  +  +YN+   M+ G       V+M     LM+
Sbjct: 340 -IKEARDVFDTMAMKGQ--------NPDV-FSYNI---MLNGYATKGCLVDMTDLFDLML 386

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G ++P+  +F+++I      G LD A+ +F EM   G   +V  Y  +I  LC   ++
Sbjct: 387 GDG-IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++ E   +M + G  P  +  N + +  C    ++ A  L+ ++   G    +   + +
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+ M+A       V  G  PD V YS  + G   + +++ AL +F  + + G 
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +++G CK  R+ E   LF EM+ +G+ PS   Y+++I+G  ++G    A +
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               M   ESG + D+ TY  ++ GL      D+AI L+ E+       N IT   +I G
Sbjct: 626 KFHEM--TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + +  R   A   F  +    + P +  +  +I+  + E
Sbjct: 684 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 260/520 (50%), Gaps = 20/520 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++ + G+  P+  +YN ++ ALCK+ ++D  E  L++M +     + +T
Sbjct: 233 GDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 291

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  Y ++GQ+ +A+ VF E+  H  + + V  S+L+ +  K+G++ +A ++ + M 
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  ++ ++++G+  K  +     LFD M   G A D   ++V+I        L+
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 411

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A+ +++EM+  G+ PD      +I +    G++   +++  +  D+ V       N ++
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +   ++GS+ +A  L+  ++        G+ + ++F          F  IIN L K G++
Sbjct: 472 QGFCTHGSLLKAKELISEIMNN------GMHLDIVF----------FSSIINNLCKLGRV 515

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A ++F     +G   +  +Y+ L+DG C   ++E++  +   M  +G +P      ++
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +   L+L R+M  +G +P     +++I  L + G+ + A     +M + G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI  Y+  + GL   +  D A+ LF+++ A     +++  N +I G+ + +RV EA+D
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           LF  +    L+PSV TY+++I    K G +++A    S M
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 39/385 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP + ++ I+++   +  + +LAL+ F ++ + G   N+ + N+L++G C + R +E+ 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 380 E-LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLI 436
           + LL    E G  P  F+ + + + LC +     A +L+R M   G    P V     +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA------------- 483
               K G   +A     +MVQ G  PD+V Y++ +  L   + +D A             
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 484 ----------------------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
                                 + +F+++  H   PDVV  ++++  LCK  ++ EA D+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ M  KG  P V +YN+++NG+   G +   M  L  ++  +  +PD  T+  LI    
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVD-MTDLFDLMLGDGIAPDFYTFNVLIKAYA 405

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  D A++++NEM + G  P+ +T+  +I  LC+  +   A+  F  M ++G+ PD +
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  LI  F +  +   A E++ E+
Sbjct: 466 AYNCLIQGFCTHGSLLKAKELISEI 490



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 197/413 (47%), Gaps = 22/413 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LFD +  +G+  P+ Y++N L++A      +D   +   EM+D+G   D  T   ++   
Sbjct: 381 LFDLMLGDGI-APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ D A+  FN++ID G   D++ ++ L+  F   G + KA ELI  + +  + L+ 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             F  +I+   K  RV  A  +FD     G   DA +Y +++ G C   ++E AL+++  
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M  +GI P+  +   L+      G +     L +E+ + R +   T+L + I+  L    
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ-RGIKPSTILYSIIIDGLF--- 615

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              QA   + A +K   + + G+ M          +  +++I++  L K+   D A+ LF
Sbjct: 616 ---QAGRTVPAKVKFHEMTESGIAM----------DICTYNIVLRGLFKNRCFDEAIFLF 662

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +E+  +    N+   N +IDG+  + R+EE+ +L   +  S   P+  T + M   L + 
Sbjct: 663 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 722

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             V  A ++   M+  G EP  +    +++EL K  + + A  +L+ + +  F
Sbjct: 723 GLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 775


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 290/639 (45%), Gaps = 36/639 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V N    N LL+  C++   D  
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV-NIIIANHLLKGFCEAKRTDEA 165

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++ + LL+  C+ G+  +A  +   + + G V   D   +S +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M   G 
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   Y+ +I G     Q + A++++ EM+   I PD   LS L+ S    G+      
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK------ 339

Query: 262 EIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-----LMI 315
            I E RDV +TM +            G     ++    M+ G       V+M     LM+
Sbjct: 340 -IKEARDVFDTMAM-----------KGQNPNVFSY-TIMLNGYATKGCLVDMTDLFDLML 386

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G ++P+  +F+++I      G LD A+ +F EM   G   +V  Y  +I  LC   ++
Sbjct: 387 GDG-IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++ E   +M + G  P  +  + + +  C    ++ A  L+ ++   G    +   + +
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+ M+A       V  G  P  V YS  + G   + +++ AL +F  + + G 
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V Y  +++G CK  R+ E   LF EM+ KG+ PS   YN++I+G  ++G    A +
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               M   ESG + +  TY  ++ GL      D+AI L+ E+       N IT   +I G
Sbjct: 626 KFHEM--TESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + +  R   A   F  +   G+ P +  +  +I+  + E
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKE 722



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 259/520 (49%), Gaps = 20/520 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++ + G+  P+  +Y+ ++ ALCK+ ++D  E  L++M + G   + +T
Sbjct: 233 GDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  Y ++GQ+ +A+ VF E+  H  + + V  S+L+ +  K+G++ +A ++ + M 
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 N  ++ ++++G+  K  +     LFD M   G A D   ++V+I        L+
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A+ +++EM+  G+ PD      +I +    G++   +++  +  D+ V       + ++
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +   ++GS+ +A  L+  ++        G+ + ++F          F  IIN L K G++
Sbjct: 472 QGFCTHGSLLKAKELISEIMNN------GMHLDIVF----------FSSIINNLCKLGRV 515

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A ++F     +G      +Y+ L+DG C   ++E++  +   M  +G +P      ++
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +   L+L R+M  +G +P      ++I  L + G+ + A     +M + G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             +   Y+  + GL   +  D A+ LF+++ A     +++  N +I+G+ + +RV EA+D
Sbjct: 636 AMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKD 695

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           LF  +   GL+P V TY+++I    K G +++A    S M
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 39/385 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP + ++ I+++   +  + +LAL+ F ++ + G   N+ + N+L+ G C + R +E+ 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 380 E-LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLI 436
           + LL    E G  P  F+ + + + LC +     A +L+R M   G    P V   + +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA------------- 483
               K G   +A     +MVQ G  PD V YS+ +  L   + +D A             
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 484 ----------------------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
                                 + +F+++  H   PDVV  ++++  LCK  ++ EA D+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ M  KG  P+V +Y +++NG+   G +   M  L  ++  +  +PD+ T+  LI    
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVD-MTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  D A++++NEM + G  P+ +T+  +I  LC+  +   A+  F  M ++G+ PD +
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  LI  F +  +   A E++ E+
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISEI 490


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 236/524 (45%), Gaps = 25/524 (4%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW--GEVDKACEL 157
           D +     +Q    +G   +A+ +   +   G    + FS  +V    W  G    A E+
Sbjct: 159 DTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV 218

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            + M +  +  N  T+  +I G +K   ++    L D+M   G   +A  Y+V++ GLC+
Sbjct: 219 FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCR 278

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMT 273
             ++     L  EM    + PD    S L    S  G+    L+L  K +     +   T
Sbjct: 279 AGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYT 338

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
             C+ ++  L  +G +  A  +LQ+++                 G V P    ++ +IN 
Sbjct: 339 --CSILLNGLCKDGKVSIAEEVLQSLVNA---------------GLV-PTRVIYNTLING 380

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             + G+L+ A S F +M       +   YN LI+GLC + R+  + +LL EM+++G  PT
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N++     R   +     ++ +M+  G +P V     ++   CK+GK  EA   L 
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM  +  LP+   Y+A I   ++    D A  L   + ++G  P +V YN++I GLC   
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +++EAE++ N +    LIP   +YN LI+  C  GNID+A L L + + K      V TY
Sbjct: 561 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA-LDLQQRMHKYGIKSTVRTY 619

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             LI GL  AGR  +   L+ +M +    P+      ++    K
Sbjct: 620 HQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 663



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 3/349 (0%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            V PN  +++ +I+  +K G L+   SL  +M   G   N   YN L+ GLC + R+ E+
Sbjct: 226 AVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGET 285

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             LL EM      P  FT + +F  L R  D    L+L  K    G        ++L+  
Sbjct: 286 SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNG 345

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK GK   A   L  +V  G +P  V Y+  I G      ++ A   F  + +    PD
Sbjct: 346 LCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPD 405

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + YN +I+GLCKA+R+  A+DL  EM   G+ P+V T+N LI+ + ++G +++  + LS
Sbjct: 406 HITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 465

Query: 559 RMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            M  +E+G  P+V++Y ++++  C  G+  +A+ + ++M  K   PN   + A+I    +
Sbjct: 466 EM--QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 A +    MK  G+ P +  +  LI    ++     A E++  +
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 171/362 (47%), Gaps = 2/362 (0%)

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNN 364
           ADV     ++      P+T +++  +   +  G L  A+ + R M + G    N F YN 
Sbjct: 142 ADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNV 201

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I G+  + R  ++ E+  EM E    P H T N+M     +  D+    +L  +M   G
Sbjct: 202 VIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHG 261

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P      +L+  LC+ G+  E    L +M  +  +PD   YS    GL         L
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF     +G        +I+++GLCK  +V+ AE++   ++  GL+P+   YN LING+
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C++G ++ A     +M  +    PD ITY  LI+GLC A R  +A  L  EM++ G  P 
Sbjct: 382 CQTGELEGAFSTFGQMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             TF  LI    +  +     +    M+E G+KP++  + ++++AF      P A  +L 
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500

Query: 665 EM 666
           +M
Sbjct: 501 DM 502



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 233/533 (43%), Gaps = 21/533 (3%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQDYGWGYD 100
           + G + EA  +  ++ R+G   PN +SYN ++  + ++    D VE+   EM +     +
Sbjct: 172 AAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-FDEMTERAVLPN 230

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
             T   ++  +   G  +   S+ ++++ HG     + +++LL    + G + +   L++
Sbjct: 231 HITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLD 290

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  +  T+ +L  G  +       L LF K  K+G         +++ GLCK+ 
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDG 350

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCN 277
           ++ +A ++   +  +G+ P   I + LI      GEL        +   R +    +  N
Sbjct: 351 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++  L     I  A +LL  M       D GV          +P   +F+ +I+   + 
Sbjct: 411 ALINGLCKAERITNAQDLLMEM------QDNGV----------NPTVETFNTLIDAYGRT 454

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+L+    +  EM + G   NV  Y ++++  C + ++ E+  +L +M      P     
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++            A  LV KM+  G  P +    LLIK LC   +  EA   +  +  
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 574

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              +PD V Y+  I        +D AL+L + +  +G    V  Y+ +ISGL  A R+ E
Sbjct: 575 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIE 634

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            E L+ +M+   ++PS A +N+++  + K GN  +A      ML+K +   D 
Sbjct: 635 MEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 687


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 294/639 (46%), Gaps = 36/639 (5%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-L 84
           +SP +  +  L+ C       E A   F Q+ R GL V N    N LLE  C++   D  
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRV-NIIIANHLLEGFCEAKRTDEA 168

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSIL 141
           +++ L    + G   D ++ + LL+  C+ G+  +A  +   + + G V   +   ++ +
Sbjct: 169 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 228

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  F K G+V+KAC+L + M    I  +  T+  ++H   K   +DKA     +M     
Sbjct: 229 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 288

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   Y+ +I G     Q + A++++ EM+   I PD   LS L+ S    G+      
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK------ 342

Query: 262 EIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-----LMI 315
            I E RDV +TM +           N  +  +YN+   M+ G       V+M     LM+
Sbjct: 343 -IKEARDVFDTMAMKG--------QNPDV-FSYNI---MLNGYATKGCLVDMTDLFDLML 389

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G ++P+  +F+++I      G LD A+ +F EM   G   +V  Y  +I  LC   ++
Sbjct: 390 GDG-IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 448

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++ E   +M + G  P  +  N + +  C    ++ A  L+ ++   G    +   + +
Sbjct: 449 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 508

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+ M+A       V  G  PD V Y+  + G   + +++ AL +F  + + G 
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +++G CK  R+ E   LF EM+ +G+ PS   Y+++I+G  ++G    A +
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               M   ESG + D+ TY  ++ GL      D+AI L+ E+       N IT   +I G
Sbjct: 629 KFHEM--TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + +  R   A   F  +    + P +  +  +I+  + E
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 260/520 (50%), Gaps = 20/520 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++ + G+  P+  +YN ++ ALCK+ ++D  E  L++M +     + +T
Sbjct: 236 GDVNKACDLFKEMVQRGI-PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 294

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  Y ++GQ+ +A+ VF E+  H  + + V  S+L+ +  K+G++ +A ++ + M 
Sbjct: 295 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 354

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  ++ ++++G+  K  +     LFD M   G A D   ++V+I        L+
Sbjct: 355 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 414

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A+ +++EM+  G+ PD      +I +    G++   +++  +  D+ V       N ++
Sbjct: 415 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +   ++GS+ +A  L+  ++        G+ + ++F          F  IIN L K G++
Sbjct: 475 QGFCTHGSLLKAKELISEIMNN------GMHLDIVF----------FSSIINNLCKLGRV 518

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A ++F     +G   +  +YN L+DG C   ++E++  +   M  +G +P      ++
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +   L+L R+M  +G +P     +++I  L + G+ + A     +M + G 
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI  Y+  + GL   +  D A+ LF+++ A     +++  N +I G+ + +RV EA+D
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           LF  +    L+PSV TY+++I    K G +++A    S M
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 738



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 39/385 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP + ++ I+++   +  + +LAL+ F ++ + G   N+ + N+L++G C + R +E+ 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 380 E-LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLI 436
           + LL    E G  P  F+ + + + LC +     A +L+R M   G    P V     +I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA------------- 483
               K G   +A     +MVQ G  PD+V Y++ +  L   + +D A             
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 484 ----------------------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
                                 + +F+++  H   PDVV  ++++  LCK  ++ EA D+
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ M  KG  P V +YN+++NG+   G +   M  L  ++  +  +PD  T+  LI    
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVD-MTDLFDLMLGDGIAPDFYTFNVLIKAYA 408

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  D A++++NEM + G  P+ +T+  +I  LC+  +   A+  F  M ++G+ PD +
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 468

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  LI  F +  +   A E++ E+
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISEI 493



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 196/413 (47%), Gaps = 22/413 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LFD +  +G+  P+ Y++N L++A      +D   +   EM+D+G   D  T   ++   
Sbjct: 384 LFDLMLGDGI-APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ D A+  FN++ID G   D++ ++ L+  F   G + KA ELI  + +  + L+ 
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             F  +I+   K  RV  A  +FD     G   DA +Y++++ G C   ++E AL+++  
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M  +GI P+      L+      G +     L +E+ + R +   T+L + I+  L   G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ-RGIKPSTILYSIIIDGLFEAG 621

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                   + A +K   + + G+ M          +  +++I++  L K+   D A+ LF
Sbjct: 622 RT------VPAKMKFHEMTESGIAM----------DICTYNIVLRGLFKNRCFDEAIFLF 665

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +E+  +    N+   N +IDG+  + R+EE+ +L   +  S   P+  T + M   L + 
Sbjct: 666 KELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKE 725

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             V  A ++   M+  G EP  +    +++EL K  + + A  +L+ + +  F
Sbjct: 726 GLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 778



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 195/435 (44%), Gaps = 22/435 (5%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKE 91
           L  L+  L   G ++EA  +FD +  +G   P+ +SYN +L     K C VD+ ++    
Sbjct: 330 LSMLMGSLCKYGKIKEARDVFDTMAMKGQN-PDVFSYNIMLNGYATKGCLVDMTDL-FDL 387

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M   G   D YT   L++ Y N G  DKA+ +FNE+ DHG   + V +  ++ A  + G+
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A E   +M D  +  ++  +  LI GF     + KA +L  ++  +G   D   +  
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRD 268
           II  LCK  ++  A  ++      G+ PD  + + L+      G++   L V +      
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +    +   +++      G ID+  +L + M++               +G + P+T  + 
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ---------------RG-IKPSTILYS 611

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           III+ L + G+   A   F EMT+ G   ++  YN ++ GL  +   +E+  L +E+   
Sbjct: 612 IIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAM 671

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             K    TLN+M   + + + V  A +L   +      P V   +++I  L K G   EA
Sbjct: 672 NVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEA 731

Query: 449 FRFLTDMVQEGFLPD 463
               + M   G  P+
Sbjct: 732 EDMFSSMQNAGCEPN 746


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 254/570 (44%), Gaps = 68/570 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +YN +L AL  + S+      L  M   G   + YT   L++  C  GQ ++AL 
Sbjct: 117 APSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           V  + +       +V  ++ L+ AF + GEVD A  L+  M +  +R +  TF  +++G 
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGL 235

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R++ A ++FD+M + G   D   Y+ ++ G CK   L  AL +++EM   G+ PD 
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + LI +                         +C +        G++++A  L+  M 
Sbjct: 296 VTFTSLIHA-------------------------MCRA--------GNLERAVALVGQM- 321

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 + G+ M          N  +F  +I+   ++G LD AL   +EM +     +V 
Sbjct: 322 -----RERGLRM----------NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVV 366

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI+G C   R++E+ EL+ EME  G KP   T +++    C+  D   A  L RKM
Sbjct: 367 CYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKM 426

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +G  P     + LI+ LC+  +  +A      M+Q G  PD   Y+  I G      V
Sbjct: 427 LKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNV 486

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             AL L  ++   G  PDVV Y+++I GL K+ R  EA+ L  ++  +  +P    Y  L
Sbjct: 487 QKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEAL 546

Query: 541 IN---------------GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           ++               G+   G ++QA      ML++     D   Y+ LI G C  G 
Sbjct: 547 MHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRH-WKLDGSVYSVLIHGHCRGGN 605

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              A+    ++   G +PN  + ++L+ GL
Sbjct: 606 IMKALSFHKQLLRCGFSPNSTSTISLVRGL 635



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 194/396 (48%), Gaps = 20/396 (5%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +LL  + + + +S+ S+  A  LL +M++                  V+PN  +++I++ 
Sbjct: 119 SLLAYNAVLLALSDASLPSARRLLASMLRD----------------GVAPNVYTYNILVR 162

Query: 333 TLLKDGKLDLALSLF-REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            L   G+ + AL +   +M   GC  NV  YN L+   C +  ++ +  L+  M E G +
Sbjct: 163 ALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVR 222

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFR 450
           P+  T N++   LC+   +  A  +  +M  +G  P  V +NTL +   CK G   EA  
Sbjct: 223 PSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL-VSGYCKAGCLHEALA 281

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M Q+G +PD+V +++ I  +     ++ A+ L   +   G   +   +  +I G C
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +   + +A     EM    + PSV  YN+LING+CK G +D+A   +  M E +   PDV
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM-EAKGMKPDV 400

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY+T++ G C  G  D A  L  +M +KG  P+ IT+ +LI GLC+  R   A   F  
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEK 460

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M + G++PD F +  LI     E N   A  +  EM
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 216/501 (43%), Gaps = 83/501 (16%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE-----MR-- 88
           L+R L + G  EEA  +     R   C PN  +YN L+ A C++  VD  E     MR  
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG 219

Query: 89  ----------------------------LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
                                         EM   G   D  +   L+  YC +G   +A
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L+VF E+   G V + V F+ L+ A  + G +++A  L+ +M +  +R+NE TF  LI G
Sbjct: 280 LAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDG 339

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F +   +D AL    +M +         Y+V+I G CK  +++ A +L  EM+  G+ PD
Sbjct: 340 FCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 240 FEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
               S +++     G+          +L K +  D       +  +S++R L     +  
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD------AITYSSLIRGLCEERRLGD 453

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L + M++      +G++          P+  ++  +I+   K+G +  ALSL  EM 
Sbjct: 454 ACELFEKMLQ------LGLQ----------PDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + G + +V  Y+ LIDGL  S R +E+  LL ++      P +    ++  C CR  +  
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC-CRTAEFK 556

Query: 412 GALNLVRKMRVQG--------HEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDM 455
             + L++   ++G        ++  +  +        ++LI   C+ G  M+A  F   +
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 456 VQEGFLPDIVCYSAAIGGLID 476
           ++ GF P+     + + GL +
Sbjct: 617 LRCGFSPNSTSTISLVRGLFE 637



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P ++AYN ++  L  A  +  A  L   M+  G+ P+V TYN+L+   C  G  ++A
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  +   +     +P+V+TY TL+   C AG  D A  L   M E G  P+ +TF  ++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLCK  R   A   F  M  +G+ PD   +  L+S +        A  V  EM
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEM 286


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 21/467 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD A+  F++M           ++ I+    K K    A+ L   ++  GI PD   L+ 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 246 LITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           LI      G++T     + +   R     T+   ++++ L   G +++A +    ++   
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ- 158

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                G++   +  GT          +IN + K G    A+ L R++       NV +YN
Sbjct: 159 -----GIKFDQVSYGT----------LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYN 203

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +ID LC    + E+Y L  EM   G      T  ++    C    +  A+ L+ +M ++
Sbjct: 204 TIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P V    +L+  LCK GK  EA   L  M++    PD++ YS  + G   +  +  A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKA 323

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             +F  +   G  PDV +Y I+I+G CK + V EA +LF EM  K ++P + TY+ LI+G
Sbjct: 324 QHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            CKSG I      +  M  ++ G P +VITY +LIDGLC  G  D AI L+N+M+++G  
Sbjct: 384 LCKSGRISYVWDLIDEM--RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIR 441

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           P   TF  L+ GLCK  R + A   F+ +  KG   D++ +  +I+ 
Sbjct: 442 PCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 231/522 (44%), Gaps = 20/522 (3%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D A+S FN ++        + F+ +L +F+K      A  L  R++   I+ +  T  +L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+ F    ++     +  K+ K G+      +  +I GLC   Q+  AL  + ++   GI
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             D      LI      G+    +K +   + R       + N+I+  L     + +AY 
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L   M      ADV     +I+   ++                 KL  A+ L  EM    
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIA----------------SKLKEAIGLLNEMVLKT 264

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV+ YN L+D LC   +++E+  +L  M ++  KP   T +++        ++  A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           ++   M + G  P V   T+LI   CK+    EA     +M Q+  +P IV YS+ I GL
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               R+    +L  ++   G   +V+ YN +I GLCK   +  A  LFN+M  +G+ P  
Sbjct: 385 CKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCS 444

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T+ +L++G CK G +  A      +L K     DV  Y  +I+G C  G  ++A+ + +
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEAFQDLLTK-GYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +MEE GC PN +TF  +I  L K D    A    R M  +G+
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 17/470 (3%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  + N L+   C    +      L ++   G+     T T L++  C  GQ +KAL  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF 151

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++++  G   D+  +  L+    K G+   A +L+ ++D    + N + +  +I    K
Sbjct: 152 HDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCK 211

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V +A  LF +MT  G ++D   Y  +I G C   +L+ A+ L +EM    I P+   
Sbjct: 212 YQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYT 271

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-LVSNGSIDQAYNLLQAMIK 301
            + L+ +   EG+    VKE       N + ++  + ++  +++  ++   Y L+  + K
Sbjct: 272 YNILVDALCKEGK----VKEAK-----NVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + + +      M   G V+P+  S+ I+IN   K+  +D AL+LF+EM Q   +  +  
Sbjct: 323 AQHVFNA-----MSLMG-VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y++LIDGLC S R+   ++L+ EM + G      T NS+   LC+   +  A+ L  KM+
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG  P     T+L+  LCK G+  +A     D++ +G+  D+  Y+  I G      ++
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            AL +   +  +GC P+ V ++III+ L K     +AE L  +MI +GL+
Sbjct: 497 EALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 169/347 (48%), Gaps = 3/347 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F+ I+++  K      A+SL   +   G   ++   N LI+  C+  ++   + 
Sbjct: 56  TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKEL 439
           +L ++ + G++P   T  ++ + LC +  V  AL+   K+  QG +   V + TL I  +
Sbjct: 116 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTL-INGV 174

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G    A + +  +      P++  Y+  I  L   + V  A  LF ++ A G   DV
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y  +I G C A ++ EA  L NEM+ K + P+V TYN+L++  CK G + +A   L+ 
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ML K    PDVITY+TL+DG  +      A  ++N M   G  P+  ++  LI G CK  
Sbjct: 295 ML-KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNK 353

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               AL  F+ M +K M P +  + +LI            ++++ EM
Sbjct: 354 MVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 20/396 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  +  +G    A  L  ++    L  PN   YN +++ALCK   V        E
Sbjct: 166 SYGTLINGVCKIGDTRGAIKLVRKIDGR-LTKPNVEMYNTIIDALCKYQLVSEAYGLFSE 224

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M   G   D  T T L+  +C + +  +A+ + NE++      + + ++IL+ A  K G+
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A  ++  M    ++ +  T+  L+ G+     + KA  +F+ M+  G   D   Y +
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           +I G CKNK ++ AL L+ EM    + P     S LI      G ++ +   I E  DR 
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +    +  NS++  L  NG +D+A  L   M       D G+           P + +F 
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKM------KDQGIR----------PCSFTFT 448

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+++ L K G+L  A   F+++   G   +V+ YN +I+G C    LEE+  +L +MEE+
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           G  P   T + +   L ++ +   A  L+R+M  +G
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 1/190 (0%)

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I+ VD A+  F  +      P ++ +N I+    K +  + A  L + +  KG+ P + T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+LIN +C  G I      L+++L K    P  IT+TTLI GLC+ G+ + A+   +++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKIL-KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
             +G   +++++  LI G+CK    R A+   R +  +  KP++ ++  +I A       
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 657 PLAFEVLKEM 666
             A+ +  EM
Sbjct: 216 SEAYGLFSEM 225



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 2/193 (1%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +V+EA  LF ++ ++ + VP   +Y+ L++ LCKS  +  V   + EM+D G   +  T 
Sbjct: 354 MVDEALNLFKEMHQKNM-VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITY 412

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWGEVDKACELIERMDD 163
             L+   C +G  D+A+++FN++ D G       F+ILL    K G +  A E  + +  
Sbjct: 413 NSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLT 472

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
               L+   + V+I+G  K+  +++AL +  KM ++G   +A  +D+II  L K  + + 
Sbjct: 473 KGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDK 532

Query: 224 ALQLYSEMKGSGI 236
           A +L  +M   G+
Sbjct: 533 AEKLLRQMICRGL 545


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/666 (23%), Positives = 272/666 (40%), Gaps = 73/666 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF  +   G   P   +YN L+ ALC+   +   +  L  M   GW  D +T   L+  Y
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C + Q D A  +F+++   G+  + V ++ L+  F + G VD+A EL   ++  ++    
Sbjct: 175 CRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM---- 230

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T   L+ G     R ++ L +  KM + G+      Y  ++   C+ ++ E A ++ +E
Sbjct: 231 YTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGS 288
           M  +G+ P     + ++ +   EG ++  V+  E  + +         N++++   + G 
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +A  LL  M       + GVE          P+  +++++I     DG ++ A  L R
Sbjct: 351 VYKAMALLDQM------RECGVE----------PDVVTYNLLIRGQCIDGHIESAFRLLR 394

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M   G   + + YN LID LC + +++E+  L   +E  G +P   T N++   LC+  
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
               A   + KM   G  P     +  I+ LCK   + E   F+ +M+Q+   P  V Y+
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I  L   +   LA  ++  + + GC PDVV Y   +   C   R+ EAE++  EM   
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRM---------------------------- 560
           G+I     YN LI+G    G  D A+  L  M                            
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDV 634

Query: 561 ----------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
                                 ++K S       Y  +++G     R D+   L + M+E
Sbjct: 635 PLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE 694

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
                N   + +L+   CK      A      M   G  P++  +  L+S F +E     
Sbjct: 695 DDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR 754

Query: 659 AFEVLK 664
           A E+ +
Sbjct: 755 AKEIFR 760



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 155/669 (23%), Positives = 287/669 (42%), Gaps = 83/669 (12%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PLR  +QD V         +   LI      G V+EA  LF ++++     P+ Y++  L
Sbjct: 191 PLRGFSQDAV---------SYAALIEGFCETGRVDEALELFRELEQ-----PDMYTHAAL 236

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++ LC +   +     L++M++ GW         L+ ++C   + ++A  + NE+ D+G 
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296

Query: 133 VDEHVFSILLV-AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
           V   V    +V A+ + G +  A  + E M       N  T+  ++ GF    +V KA+ 
Sbjct: 297 VPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L D+M + G   D   Y+++I G C +  +E A +L   M+G+G+  D    + LI +  
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDA-- 414

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                                  LC +        G +D+A +L             G+E
Sbjct: 415 -----------------------LCKT--------GKVDEACSLFD-----------GLE 432

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
               ++G + PN+ +F+ +IN L K GK D+A +   +M   GC  + + Y+  I+ LC 
Sbjct: 433 ----YRG-IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +    E    + EM +   KP+      +   L + ++   A  +  +M   G  P V  
Sbjct: 488 TKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVT 547

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T  ++  C  G+  EA   + +M + G + D + Y+  I G   I + D A+ + + + 
Sbjct: 548 YTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT 607

Query: 492 AHGCCPDVVAYNII----------------ISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
                P+   + I+                 + + K   +A+  +LF E++ K  +PS A
Sbjct: 608 GVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELF-ELMKKNSVPSSA 666

Query: 536 -TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
             Y  ++ G+ +   +D+    +S M E +    + I YT+L++  C      DA  L  
Sbjct: 667 RAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDI-YTSLVNCFCKLRMYPDAWALLC 725

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            M   G  PN I++  L++G     +   A   FR ++ K    D  V+  +I   + + 
Sbjct: 726 SMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQG 785

Query: 655 NPPLAFEVL 663
           +P +  +++
Sbjct: 786 HPDMCHDMI 794



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 224/533 (42%), Gaps = 55/533 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +  F  LL  FS++        L   M           T+  LI    +++ +  A +  
Sbjct: 93  DRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYL 152

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
             M +SG+  DA  ++ +I G C+ +QL++A  L+ +M   G + D    + LI     E
Sbjct: 153 SLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALI-----E 207

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           G                     C +        G +D+A                    L
Sbjct: 208 G--------------------FCET--------GRVDEA--------------------L 219

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            +F+    P+  +   ++  L    + +  L + ++M ++G       Y  L+D  C   
Sbjct: 220 ELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQ 279

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           + EE+ ++L EM ++G  P   T  ++    CR   + GA+ +   M+++G EP V    
Sbjct: 280 KAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYN 339

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +++  C  GK  +A   L  M + G  PD+V Y+  I G      ++ A  L R +  +
Sbjct: 340 AMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGN 399

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   D   YN++I  LCK  +V EA  LF+ +  +G+ P+  T+N +ING CK G  D A
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA 459

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L +M+     +PD  TY+  I+ LC      + +   +EM +K   P+ + +  +I 
Sbjct: 460 CTFLEKMVSA-GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L K      A   +  M   G  PD+  +   + A+ +E     A  V+ EM
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEM 571



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 212/521 (40%), Gaps = 46/521 (8%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +  A  +F+ +K +G C PN ++YN +++  C    V      L +M++ G   D  T
Sbjct: 314 GRMSGAVRVFESMKLKG-CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVT 372

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L++  C  G  + A  +   +  +G   D++ +++L+ A  K G+VD+AC L + ++
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              IR N  TF  +I+G  K  + D A    +KM  +G A D   Y   I  LCK K   
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-------RDVNTMTLL 275
             L    EM    + P     + +I     E    L  + IW          DV T T  
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR-IWGQMVSLGCSPDVVTYT-- 549

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
             + +R   + G + +A N++  M KG  I D                  +++ +I+   
Sbjct: 550 --TSVRAYCNEGRLHEAENVVMEMKKGGIIVDA----------------MAYNTLIDGHT 591

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNL----------------IDGLCNSNRLEESY 379
             GK D A+++ + MT +  M N F +  L                   +  +  L + +
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVF 651

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           EL   M+++    +     ++       + +    +LV  M+           T L+   
Sbjct: 652 ELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCF 711

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     +A+  L  M+  GFLP+++ Y   + G     + D A E+FR +       D 
Sbjct: 712 CKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDE 771

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + + III GL +        D+ + +      PS  TY +L
Sbjct: 772 IVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 83/412 (20%), Positives = 170/412 (41%), Gaps = 41/412 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V+EA  LFD ++  G+  PN+ ++N ++  LCK    D+    L++M   
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGI-RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D YT +P ++  C +    + LS  +E++        V ++I++    K      A
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +  +M       +  T+   +  +  + R+ +A  +  +M K G   DA  Y+ +I G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDV-- 269
                + + A+ +   M G    P+   F IL + +       ++ L    +W+  ++  
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649

Query: 270 ----------NTMTLLCNSIMRIL---VSNGSIDQAYNLLQAMIKGE-PI-ADVGVEML- 313
                     N++     + + IL        +D+  +L+  M + + P+  D+   ++ 
Sbjct: 650 VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709

Query: 314 -----------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                            MI  G + PN  S+  +++    +G+ D A  +FR +      
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFL-PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            +  ++  +IDGL      +  ++++  +E+   KP+  T   +   L  R+
Sbjct: 769 TDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 245/570 (42%), Gaps = 83/570 (14%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           WG D        QV   +G  D+A  +F++++++G         LL++            
Sbjct: 178 WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYG---------LLIS------------ 216

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
               +D CN+ ++        H       +  AL++F +  + G   + A Y++I   LC
Sbjct: 217 ----VDSCNLFIS--------HLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLC 264

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           +  ++  A QL  +M+  G  PD    S +I      GEL  ++K I E           
Sbjct: 265 QLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEE----------- 313

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
                                  IKG                 + PN  +++ +I  L K
Sbjct: 314 ---------------------MQIKG-----------------LKPNPYTYNGVILLLCK 335

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            GK+  A  + REM   G   +  +Y  LIDG C    +  +Y L  EM++    P   T
Sbjct: 336 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 395

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++   LC+   V+ A  L  +M  +  EP     T LI   CK GK  EAF     M+
Sbjct: 396 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 455

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           Q G  P+IV Y+A   GL     VD A EL  ++C  G   ++  YN +++GLCKA  + 
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 515

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A  L  +M   G  P   TY  L++ +CKS  + +A   L +ML++E   P V+T+  L
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL-QPTVVTFNVL 574

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ++G C++G  +D   L   M EKG  PN  T+ +LI   C  +  RA    +R M  KG+
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD   +  LI       N   A+ + ++M
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDM 664



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 275/580 (47%), Gaps = 34/580 (5%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           P       + L   G+++EA  LFD++   GL +  + S N  +  L  S  +D +++ L
Sbjct: 182 PRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVD-SCNLFISHL--SEDLDGIKIAL 238

Query: 90  K---EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
           K   E  + G  ++  +   +    C  G+  +A  +  ++   G + + + +S ++  +
Sbjct: 239 KVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGY 298

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            + GE+ +  +LIE M    ++ N  T+  +I    K  +V +A ++  +M   G A D 
Sbjct: 299 CQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 358

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            +Y  +I G CK   +  A +L+ EM+   I+PDF   + +I      G +    K   E
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 418

Query: 266 ------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                 + D  T T L +   +     G + +A++L   M++      +G          
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCK----EGKMKEAFSLHNQMLQ------MG---------- 458

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++PN  ++  + + L K G++D A  L  EM + G   N++ YN+L++GLC +  ++++ 
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 518

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L+++ME +GF P   T  ++    C+ +++V A  L+R+M  +  +P V    +L+   
Sbjct: 519 KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 578

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G   +  + L  M+++G +P+   Y++ I        +    E++R +CA G  PD 
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YNI+I G CKA+ + EA  L  +M+ KG   +V++YN LI G+ K     +A     +
Sbjct: 639 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           M  +E    D   Y    D     G+ +  + L +E  EK
Sbjct: 699 M-RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEK 737


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 244/551 (44%), Gaps = 56/551 (10%)

Query: 115 GQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           GQ D    +  ++   G+   E +F  ++  + + G  ++A E+  R+ +     + K +
Sbjct: 90  GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             ++   + ++R+     ++  M + GF  +   Y+V++  LCKN +++ A +L  EM  
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            G  PD    + +I+S  + G    LVKE                               
Sbjct: 210 KGCCPDAVSYTTVISSMCEVG----LVKE------------------------------- 234

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
                          G E+   F+    P  S ++ +IN L K+     A  L REM + 
Sbjct: 235 ---------------GRELAERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEK 275

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   NV  Y+ LI+ LCNS ++E ++  L +M + G  P  +TL+S+ +    R     A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335

Query: 414 LNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           L+L  +M R  G +P V     L++  C HG  ++A    + M + G  P+I  Y + I 
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G      +D A+ ++  +   GCCP+VV Y  ++  LC+  +  EAE L   M  +   P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           SV T+N  I G C +G +D A     +M ++    P+++TY  L+DGL  A R ++A  L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             E+  +G   +  T+  L+ G C    P  AL     M   G  PD      +I A+  
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575

Query: 653 ELNPPLAFEVL 663
           +     A ++L
Sbjct: 576 QGKAERAAQML 586



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 26/408 (6%)

Query: 279 IMRILVSNGSIDQAYNLLQAM------------------IKGEPIADVGVEMLMIFKG-T 319
           ++R L  +G +D    LLQ M                   +   +A+  VEM    K   
Sbjct: 82  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+   ++ +++TLL + ++ +   ++R+M + G   NVF YN L+  LC +N+++ + 
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM   G  P   +  ++   +C     VG +   R++  +  EP V     LI  L
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCE----VGLVKEGREL-AERFEPVVSVYNALINGL 256

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK      AF  + +MV++G  P+++ YS  I  L +  +++LA      +   GC P++
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              + ++ G        +A DL+N+MI   GL P+V  YN L+ G+C  GNI +A+   S
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M E+   SP++ TY +LI+G    G  D A+ +WN+M   GC PN + +  ++  LC+ 
Sbjct: 377 HM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + + A     +M ++   P +  F A I           A +V ++M
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 231/526 (43%), Gaps = 83/526 (15%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           M++  +KR+G   PN ++YN LL+ALCK+  VD  +  L EM + G   D  + T ++  
Sbjct: 167 MVYRDMKRDGF-EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225

Query: 111 YCNSG----------QFDKALSVFNEIIDHGWVDEH----------------------VF 138
            C  G          +F+  +SV+N +I+ G   EH                       +
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALIN-GLCKEHDYKGAFELMREMVEKGISPNVISY 284

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           S L+      G+++ A   + +M       N  T   L+ G   +     AL L+++M +
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344

Query: 199 S-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             G   +   Y+ ++ G C +  +  A+ ++S M+  G +P+      LI   +  G L 
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
             V  IW     N M L       ++V         N+++A+ +     +    + ++ K
Sbjct: 405 GAVY-IW-----NKM-LTSGCCPNVVVYT-------NMVEALCRHSKFKEAESLIEIMSK 450

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLE 376
              +P+  +F+  I  L   G+LD A  +FR+M Q   C  N+  YN L+DGL  +NR+E
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+Y L RE+   G + +  T N++    C       AL LV KM V G  P      ++I
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK GKA  A + L D+V  G                           +R        
Sbjct: 571 LAYCKQGKAERAAQML-DLVSCG------------------------RRKWR-------- 597

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           PDV++Y  +I GLC++    +   L   MI+ G++PS+AT+++LIN
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 174/424 (41%), Gaps = 58/424 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ-VYCNSGQFDKALS 122
           PN  SY+ L+  LC S  ++L    L +M   G   + YTL+ L++  +     FD AL 
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALD 337

Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           ++N++I    +  +V  ++ L+  F   G + KA  +   M++     N +T+  LI+GF
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K+  +D A+ +++KM  SG   +  +Y  ++  LC++ + + A  L   M      P  
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              +  I    D G L       W ++    M                 +Q +       
Sbjct: 458 PTFNAFIKGLCDAGRLD------WAEKVFRQM-----------------EQQHR------ 488

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                                PN  +++ +++ L K  +++ A  L RE+   G   +  
Sbjct: 489 -------------------CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLV 417
            YN L+ G CN+     + +L+ +M   G  P   T+N +    C++   +     L+LV
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI-- 475
              R +   P V   T +I  LC+     +    L  M+  G +P I  +S  I   I  
Sbjct: 590 SCGR-RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648

Query: 476 DIKR 479
           DI R
Sbjct: 649 DIVR 652



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 153/390 (39%), Gaps = 55/390 (14%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
            ++K  C  +   L  L++     G   +A  L++Q+ R     PN  +YN L++  C  
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
            ++         M++ G   +  T   L+  +   G  D A+ ++N+++  G   +  V+
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + ++ A  +  +  +A  LIE M   N   +  TF   I G     R+D A ++F +M +
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

Query: 199 SGF-ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
                 +   Y+ ++ GL K  ++E A  L  E+   G+                     
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE-------------------- 525

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                 W     NT+             +GS +     +   + G+ + D          
Sbjct: 526 ------WSSSTYNTLL------------HGSCNAGLPGIALQLVGKMMVD---------- 557

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNR 374
              SP+  + ++II    K GK + A  +  ++   G  +   +V  Y N+I GLC SN 
Sbjct: 558 -GKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNC 615

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCL 404
            E+   LL  M  +G  P+  T + +  C 
Sbjct: 616 REDGVILLERMISAGIVPSIATWSVLINCF 645



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 5/216 (2%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M   L R  +      L + + K  C  S       I+ L   G ++ A  +F Q++++ 
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C PN  +YN LL+ L K+  ++      +E+   G  +   T   LL   CN+G    A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547

Query: 121 LSVFNE-IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC---NIRLNEKTFCVL 176
           L +  + ++D    DE   +++++A+ K G+ ++A ++++ +  C     R +  ++  +
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNV 606

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           I G  + +  +  + L ++M  +G     A + V+I
Sbjct: 607 IWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 159/603 (26%), Positives = 256/603 (42%), Gaps = 70/603 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P N ++N ++   C+   V + E  L  MQ +    D Y    L+  YC  GQ   AL  
Sbjct: 147 PCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGW 206

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
              +ID+G     V                                  TF  +I+ F  +
Sbjct: 207 MRFMIDNGCTPSLV----------------------------------TFGTVINAFCNQ 232

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +A  LFD M ++G   +   Y+ ++ G  K + +  A  LY EMK   + PD    
Sbjct: 233 GNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTF 292

Query: 244 SKLITSCSDEGELTLLVKEIWEDRD----------VNTMTLLCNSIMRILVSNGSIDQAY 293
           + L+      G          EDRD            +++ L N  +  L   G +D+A 
Sbjct: 293 NILVAGHYRYGRE--------EDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAM 344

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             L+ M++               KG ++P   +F+ II    + G  + A   +R M + 
Sbjct: 345 KFLEDMLE---------------KG-ITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKF 388

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +    ++LI GL    RL+E+ +LL EM   G          +     R  DV GA
Sbjct: 389 GLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGA 448

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            +L  +M  +G  P     +  I  L   G   EA+     M ++GF+P+   Y++ I G
Sbjct: 449 YSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRG 508

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
             +  R+  AL L R++   G  PD+   NIII+GLCK  R+  A D+F  M   GLIP 
Sbjct: 509 FCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPD 568

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           + TYN LI+G+CK+ +       +++M       PD+ TY   + GLC   +   A+M+ 
Sbjct: 569 IVTYNTLIDGYCKAFDTVSTDEVVNKMYAT-GWDPDITTYNIRLHGLCTGRKMSRAVMML 627

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            E+   G  P+ +T+  ++ G+C     RA +V  +++K     P++     L+S F  +
Sbjct: 628 EELISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLK-MAFVPNVVTANLLLSHFCKQ 686

Query: 654 LNP 656
             P
Sbjct: 687 GMP 689



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 258/559 (46%), Gaps = 59/559 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+ Y+YN L+ A C           ++ M D G      T   ++  +CN G   +A 
Sbjct: 180 CQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEAR 239

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           ++F+ + + G +   V ++ L+  + K  ++ +A  L E M    +  +  TF +L+ G 
Sbjct: 240 NLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGH 299

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +  R +   +L   +++SG  S +++Y++ + GLC    L+ A++   +M   GITP  
Sbjct: 300 YRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTV 359

Query: 241 EILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
              + +I + S  G  E       +     +   +L C+S++  L     + +A +LL  
Sbjct: 360 VAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYE 419

Query: 299 MI-KGEPIADVGVEMLM--IFK-GTVS---------------PNTSSFDIIINTLLKDGK 339
           MI +G PI      +L+   F+ G V+               P+  +F   IN L   G 
Sbjct: 420 MIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGL 479

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A  +F +M++ G M N F+YN+LI G CNS RL+E+  L REM   G  P  FT N 
Sbjct: 480 VDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNI 539

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+   +  A ++ R M          H+T                         G
Sbjct: 540 IINGLCKEGRMKSASDVFRNM----------HHT-------------------------G 564

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +PDIV Y+  I G           E+   + A G  PD+  YNI + GLC  ++++ A 
Sbjct: 565 LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAV 624

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  E+I+ G++P   TYN ++NG C +  +++AM+  +++L K +  P+V+T   L+  
Sbjct: 625 MMLEELISAGVVPDTVTYNTVMNGVC-TDVLERAMIVTAKLL-KMAFVPNVVTANLLLSH 682

Query: 580 LCIAGRPDDAIMLWNEMEE 598
            C  G P+  IM   ++ E
Sbjct: 683 FCKQGMPEKTIMWGQKLNE 701



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 235/547 (42%), Gaps = 65/547 (11%)

Query: 181 VKKSRVDKALQLFDKMTK--SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           +++  VD++ ++ + M K  + F SD ++ D ++ G  K +    AL++   M+  G+ P
Sbjct: 53  IRRVGVDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRP 112

Query: 239 D---FEILSKLITSCSDEGELTLLVKEIWE------DRDVNTM--------------TLL 275
                 IL KL+    D G +  L++ +        +R+ N +              +LL
Sbjct: 113 SSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLL 172

Query: 276 CNSIMRILVSNGSIDQAYNLL--QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           C  +M+       +  AYN+L      +G+    +G    MI  G  +P+  +F  +IN 
Sbjct: 173 C--VMQKFKCQPDV-YAYNILINAYCTRGQTFDALGWMRFMIDNG-CTPSLVTFGTVINA 228

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
               G +  A +LF  M + G + NV  YN L++G   +  + ++  L  EM+     P 
Sbjct: 229 FCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPD 288

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +     R         L+R +   G         + +  LC  G   EA +FL 
Sbjct: 289 CTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLE 348

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           DM+++G  P +V +++ I         + A + +R +   G  P  +  + +I GL K  
Sbjct: 349 DMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLW 408

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------- 560
           R+ EA DL  EMI +GL  + A + LL++G+ + G++  A    + M             
Sbjct: 409 RLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFS 468

Query: 561 ---------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
                                + K+   P+   Y +LI G C +GR  +A+ML  EM  K
Sbjct: 469 AFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARK 528

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P+  T   +I GLCK  R ++A   FR M   G+ PD+  +  LI  +    +    
Sbjct: 529 GLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVST 588

Query: 660 FEVLKEM 666
            EV+ +M
Sbjct: 589 DEVVNKM 595



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 5/230 (2%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A+ F   I  L  VGLV+EA  +F Q+ ++G  +PNN+ YN L+   C S  +   
Sbjct: 460 IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGF-MPNNFVYNSLIRGFCNSGRLQEA 518

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
            M  +EM   G   D +T   ++   C  G+   A  VF  +   G + + V ++ L+  
Sbjct: 519 LMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDG 578

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + K  +     E++ +M       +  T+ + +HG     ++ +A+ + +++  +G   D
Sbjct: 579 YCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPD 638

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
              Y+ ++ G+C +  LE A+ + +++      P+    + L++    +G
Sbjct: 639 TVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQG 687


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 245/523 (46%), Gaps = 31/523 (5%)

Query: 172 TFCVLIHGFVKKSR---VDKALQLFDKMTKSGFASDAAMYDVIIGGLCK--NKQLEMALQ 226
           +FC  +H F+ KS    V+  +  F +M +         ++ I+G + K  N     A+ 
Sbjct: 21  SFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAIS 80

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILV 284
           L  +++  GITP     + L+      GE+T       +      +  T+  N+++  + 
Sbjct: 81  LSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC 140

Query: 285 SNGSIDQAYNLLQAMIK--------------------GEPIADVGVEMLMIFKGT-VSPN 323
            NG + +A +    +I                     GE  A   ++ML   +G  V+ +
Sbjct: 141 LNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRA--ALQMLKKIEGKLVNTD 198

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              ++IIIN+L KD  +  A  L+ EM       +V  +N+LI G C   +L+E++ L  
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM      P  +T + +   LC+  ++  A N++  M  QG  P V   + L+   C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A    + M + G  P    Y+  I GL  IK VD AL LF+++C  G  PD V YN
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GLCK  R++ A  L +EM   G+   + TYN LI+  CK+ +ID+A + L + ++ 
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA-IALVKKIKD 437

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   P + TY  LIDGLC  GR  +A  ++ ++  KG + N  T+  +I GLCK      
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE 497

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A V    M+  G+ PD   +  +I A   +     A ++L+EM
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 234/500 (46%), Gaps = 53/500 (10%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T   L+  YC+ G+   A S+F +I+  G+    + F+ L+      G++ +A    + +
Sbjct: 96  TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                 L++ ++  LI+G  K      ALQ+  K+      +D  MY++II  LCK+K +
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A QLYSE                           ++ K I  D       +  NS++ 
Sbjct: 216 SDAYQLYSE---------------------------MITKRISPD------VVTFNSLIL 242

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G + +A+ L   M+                   ++P+  +F I+++ L KDG + 
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKN----------------INPDVYTFSILVDALCKDGNIT 286

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A ++   M + G + +V  Y++L+DG C  N + ++  +   M   G  P   + N M 
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             L + + V  AL+L ++M  +G  P  V +N+L I  LCK G+   A++ + +M   G 
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL-IDGLCKLGRISYAWQLVDEMHNNGI 405

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI+ Y++ I  L     +D A+ L + I   G  P +  YNI+I GLCK  R+  A+D
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD 465

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +F +++ KG   +  TYN++ING CK G  ++A + LS+M E     PD +TY T+I  L
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKM-ENNGIIPDAVTYETIIRAL 524

Query: 581 CIAGRPDDAIMLWNEMEEKG 600
                 + A  L  EM  +G
Sbjct: 525 FRKDENEKAEKLLREMIIRG 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 229/528 (43%), Gaps = 51/528 (9%)

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           V  N+  +  A+S+ +++   G     V F+IL+  +   GE+  A  +  ++       
Sbjct: 68  VKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHP 127

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
              TF  LI+G     ++ +AL   D +   GF  D   Y  +I GLCK  +   ALQ+ 
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            +++G                                 + VNT  ++ N I+  L  + +
Sbjct: 188 KKIEG---------------------------------KLVNTDVVMYNIIINSLCKDKA 214

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +  AY L   MI                   +SP+  +F+ +I      G+L  A  LF 
Sbjct: 215 VSDAYQLYSEMITKR----------------ISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM       +V+ ++ L+D LC    +  +  +L  M + G  P   T +S+    C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +V  A ++   M   G  P      ++I  L K     EA     +M  +G  PD V Y+
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I GL  + R+  A +L  ++  +G   D++ YN +I  LCK   + +A  L  ++  +
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ PS+ TYN+LI+G CK G +  A      +L K   S +  TY  +I+GLC  G  ++
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK-GYSVNAWTYNIMINGLCKEGLFNE 497

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           A +L ++ME  G  P+ +T+  +I  L + D    A    R M  +G+
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 174/394 (44%), Gaps = 50/394 (12%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-I 127
           YN ++ +LCK  +V        EM       D  T   L+  +C  GQ  +A  +F+E +
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMV 261

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           + +   D + FSIL+ A  K G + +A  ++  M    +  +  T+  L+ G+   + V+
Sbjct: 262 LKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVN 321

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           KA  +F  M++ G A  A  Y+++I GL K K ++ AL L+ EM   GI PD        
Sbjct: 322 KAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD-------- 373

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                                    T+  NS++  L   G I  A+ L+  M      AD
Sbjct: 374 -------------------------TVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPAD 408

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
           +                 +++ +I+ L K+  +D A++L +++   G   +++ YN LID
Sbjct: 409 I----------------LTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC   RL+ + ++ +++   G+    +T N M   LC+      A  L+ KM   G  P
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIP 512

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                  +I+ L +  +  +A + L +M+  G L
Sbjct: 513 DAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 218/441 (49%), Gaps = 15/441 (3%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G+  D  TLT  ++ +C  GQ  +AL   +++I  G+ +D+  +  L+    K GE   A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+ R D   ++ +   +  +I G  K   V+ A  L+ +        D   Y+ +I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   +L+ A+ L+++M    I PD    S L+     +G        I E ++V  M +
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGN-------IKEAKNVLAM-M 429

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           +  SI   +V+  S+   Y L+  + K E I +      M  +G V+ N  S++I+IN  
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNT-----MSHRG-VTANVQSYNIMINGF 483

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   +D A+ LF+EM       +V  Y++LIDGLC S R+  + EL+ EM   G +P  
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T NS+   LC++  V  A+ L+ K++ QG  P +   T+L+K LC+ GK  +A +   D
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           ++ +G+  D+  Y+  I G  D    D AL L   +  +GC PD   Y III  L +   
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663

Query: 515 VAEAEDLFNEMITKGLIPSVA 535
              AE L  EMI +GL+ ++ 
Sbjct: 664 NDMAEKLLREMIMRGLLVALT 684



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 50/465 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T    I GF  K ++ +AL   DK+   GF  D   Y  +I GLCK  + + AL+L    
Sbjct: 265 TLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRN 324

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            G  + PD                                  ++ N+I+  +  +  ++ 
Sbjct: 325 DGKLVQPD---------------------------------VVMYNTIIDGMCKDKHVND 351

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A++L    +                   + P+  +++ +I+     GKL  A+ LF +MT
Sbjct: 352 AFDLYSEKVSKR----------------IFPDVFTYNALISGFCIVGKLKDAIDLFNKMT 395

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
               + +V+ ++ L+DG C    ++E+  +L  M +   KP   T +S+    C   +V 
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVN 455

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A ++   M  +G    V+   ++I   CK     EA +   +M  +   PD++ YS+ I
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLI 515

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL    R+  ALEL  ++   G  PD++ YN I+  LCK   V +A  L  ++  +G+ 
Sbjct: 516 DGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIR 575

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + TY +L+ G C+SG ++ A      +L K   + DV  YT +I G C  G  D+A+ 
Sbjct: 576 PDMNTYTILVKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           L ++MEE GC P+  T+  +I  L + D    A    R M  +G+
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 163/325 (50%), Gaps = 1/325 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S+  +IN L K G+   AL L R         +V +YN +IDG+C    + ++++L  E 
Sbjct: 300 SYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 P  FT N++    C    +  A++L  KM  +   P V   ++L+   CK G  
Sbjct: 360 VSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNI 419

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   L  M+++   PD+V YS+ + G   +  V+ A  +F  +   G   +V +YNI+
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G CK + V EA  LF EM  K + P V TY+ LI+G CKSG I  A+  +  M     
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM-HYRG 538

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD+ITY +++D LC     D AI L  +++ +G  P+  T+  L+ GLC+  +   A 
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
             F  +  KG   D++ +  +I  F
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGF 623



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 223/497 (44%), Gaps = 35/497 (7%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A+ LF ++ +         +  I+G L K+K     L L  +M+  GI  +F   + L
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 247 ITSCSDEGELTL-------------LVKEIWEDRDVNTMTLLCNSIM------RILVSNG 287
           I S    G +               ++K+ ++ +++     LC  ++      R+ + + 
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 288 SIDQAYNLLQA----------MIKGEPIA---DVGVEML--MIFKGTVSPNTSSFDIIIN 332
              + +N+L +           IK + +    ++ +E     I K    P+T +    I 
Sbjct: 212 LQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIK 271

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
                G++  AL    ++  +G   +   Y  LI+GLC     + + ELLR  +    +P
Sbjct: 272 GFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQP 331

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                N++   +C+ + V  A +L  +   +   P V     LI   C  GK  +A    
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLF 391

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M  +  +PD+  +S  + G      +  A  +   +      PDVV Y+ ++ G C  
Sbjct: 392 NKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLV 451

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
             V +AE +FN M  +G+  +V +YN++ING+CK   +D+AM     M  K+   PDVIT
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI-FPDVIT 510

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++LIDGLC +GR   A+ L +EM  +G  P+ IT+ +++  LCK      A+     +K
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 633 EKGMKPDMFVFVALISA 649
            +G++PDM  +  L+  
Sbjct: 571 GQGIRPDMNTYTILVKG 587



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 176/347 (50%), Gaps = 1/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+   ++ II+ + KD  ++ A  L+ E        +VF YN LI G C   +L+++ 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L  +M      P  +T + +    C+  ++  A N++  M  Q  +P V   + L+   
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C   +  +A      M   G   ++  Y+  I G   IK VD A++LF+++      PDV
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y+ +I GLCK+ R++ A +L +EM  +G  P + TYN +++  CK  ++D+A+  L++
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L+ +   PD+ TYT L+ GLC +G+ +DA  ++ ++  KG   +   +  +I G C   
Sbjct: 569 -LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKG 627

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               AL     M+E G  PD   +  +I +   +    +A ++L+EM
Sbjct: 628 LFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 150/281 (53%), Gaps = 3/281 (1%)

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKA 445
           ++G++P   TL +  +  C +  +  AL+   K+   G H   V + TL I  LCK G+ 
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTL-INGLCKVGET 314

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A   L     +   PD+V Y+  I G+   K V+ A +L+ +  +    PDV  YN +
Sbjct: 315 KAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNAL 374

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ISG C   ++ +A DLFN+M +K +IP V T+++L++G+CK GNI +A   L+ M+ K+S
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM-KQS 433

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PDV+TY++L+DG C+    + A  ++N M  +G   N  ++  +I G CK      A+
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F+ M  K + PD+  + +LI           A E++ EM
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 22/344 (6%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  + V  R F        LI     VG +++A  LF+++  + + +P+ Y+++ L++  
Sbjct: 355 LYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNI-IPDVYTFSILVDGF 413

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDE 135
           CK  ++   +  L  M       D  T + L+  YC   + +KA S+FN +   G   + 
Sbjct: 414 CKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANV 473

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++I++  F K   VD+A +L + M    I  +  T+  LI G  K  R+  AL+L D+
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   D   Y+ I+  LCK   ++ A+ L +++KG GI PD    + L+      G+
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593

Query: 256 LTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           L    ++++ED   +  N        +++     G  D+A  LL  M +   I       
Sbjct: 594 LE-DARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCI------- 645

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                    P+  +++III +L +  + D+A  L REM   G +
Sbjct: 646 ---------PDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           I  +G  PD +     I G C   ++ +A    +++I  G      +Y  LING CK G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
              A+  L R  + +   PDV+ Y T+IDG+C     +DA  L++E   K   P+  T+ 
Sbjct: 314 TKAALELLRRN-DGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ALI+G C   + + A+  F  M  K + PD++ F  L+  F  + N   A  VL  M
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 171/327 (52%), Gaps = 2/327 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +G   P+  ++  IIN L K G+   A  LF++M + GC  +V  Y+ +ID LC   
Sbjct: 1   MVARG-YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDR 59

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R+ E+ ++   M+  G  P  FT NS+ + LC       A  ++ +M      P +   +
Sbjct: 60  RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           LLI   CK G   EA   L  M + G  P++V YS+ + G      V  A +LF  +   
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PDV +YNI+I+G CKA+R+ EA+ LFNEMI +GL P + +YN LI+G C+ G + +A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 ML      PD+ TY+ L+DG C  G    A  L+  M+     PN + +  LI 
Sbjct: 240 HDLFKNMLT-NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDM 640
            +CK    + A   F  +  +G++P+M
Sbjct: 299 AMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 161/303 (53%), Gaps = 2/303 (0%)

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           GE +A  G+   M   G   P+  ++  II++L KD +++ AL +F  M   G   N+F 
Sbjct: 24  GETVAAAGLFKKMGEAG-CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFT 82

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI GLCN +R  E+  +L EM      P   T + +    C+  +V  A  +++ M 
Sbjct: 83  YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G EP V   + L+       +  EA +    M+ +G  PD+  Y+  I G    KR+ 
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A +LF ++   G  PD+V+YN +I GLC+  R+ EA DLF  M+T G +P + TY++L+
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G+CK G + +A   L R ++     P+++ Y  LID +C +    +A  L++E+  +G 
Sbjct: 263 DGFCKQGYLAKAFR-LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 321

Query: 602 APN 604
            PN
Sbjct: 322 QPN 324



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 1/317 (0%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +V  Y  +I+GLC       +  L ++M E+G +P   T +++   LC+ + 
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  AL++   M+ +G  P +     LI+ LC   +  EA   L +M+    +P+IV +S 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I        V  A  + + +   G  P+VV Y+ +++G      V EA  LF+ MITKG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P V +YN+LING+CK+  I +A    + M+  +  +PD+++Y TLIDGLC  GR  +A
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIH-QGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L+  M   G  P+  T+  L+ G CK      A   FR M+   +KP+M ++  LI A
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 650 FLSELNPPLAFEVLKEM 666
                N   A ++  E+
Sbjct: 300 MCKSRNLKEARKLFSEL 316



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 165/369 (44%), Gaps = 49/369 (13%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  +I+G  K      A  LF KM ++G   D   Y  II  LCK++++  AL ++S M
Sbjct: 12  TYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 71

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           K  GI+P+    + LI                           LCN              
Sbjct: 72  KAKGISPNIFTYNSLIQG-------------------------LCNF------------S 94

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
            +    AM+          EM+ +    + PN  +F ++IN   K+G +  A  + + MT
Sbjct: 95  RWREASAMLN---------EMMSL---NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           ++G   NV  Y++L++G      + E+ +L   M   G KP  F+ N +    C+ + + 
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L  +M  QG  P +     LI  LC+ G+  EA     +M+  G LPD+  YS  +
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      +  A  LFR + +    P++V YNI+I  +CK++ + EA  LF+E+  +GL 
Sbjct: 263 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 322

Query: 532 PSVATYNLL 540
           P++  + L 
Sbjct: 323 PNMKHWKLF 331



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 16/332 (4%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D H ++ ++    K GE   A  L ++M +   + +  T+  +I    K  RV++AL +F
Sbjct: 9   DVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 68

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
             M   G + +   Y+ +I GLC   +   A  + +EM    I P+    S LI     E
Sbjct: 69  SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 128

Query: 254 GELTLLVKEIWEDRDV-NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           G        ++E R V  TMT +   +   +V+  S+   Y+L   + +   + DV    
Sbjct: 129 G-------NVFEARGVLKTMTEM--GVEPNVVTYSSLMNGYSLQAEVFEARKLFDV---- 175

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            MI KG   P+  S++I+IN   K  ++  A  LF EM   G   ++  YN LIDGLC  
Sbjct: 176 -MITKG-CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 233

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            RL E+++L + M  +G  P   T + +    C++  +  A  L R M+    +P +   
Sbjct: 234 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +LI  +CK     EA +  +++  +G  P++
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 53/370 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L  +G    A  LF ++   G C P+  +Y+ ++++LCK   V+        M+  
Sbjct: 16  IINGLCKIGETVAAAGLFKKMGEAG-CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 74

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + +T   L+Q  CN  ++ +A ++ NE++    +   V FS+L+  F K G V +A
Sbjct: 75  GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 134

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M +  +  N  T+  L++G+  ++ V +A +LFD M   G   D   Y+++I G
Sbjct: 135 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILING 194

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK K++  A QL++EM   G+TPD    + LI      G L        E  D      
Sbjct: 195 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR-------EAHD------ 241

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
               + + +++NG++                                P+  ++ I+++  
Sbjct: 242 ----LFKNMLTNGNL--------------------------------PDLCTYSILLDGF 265

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT- 393
            K G L  A  LFR M       N+ +YN LID +C S  L+E+ +L  E+   G +P  
Sbjct: 266 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325

Query: 394 -HFTLNSMFR 402
            H+ L  +++
Sbjct: 326 KHWKLFEIWK 335


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 269/580 (46%), Gaps = 66/580 (11%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   +  L + L  VG       LF  V R G   P  Y+++ ++   C+   + L E  
Sbjct: 20  SASGVAILFKLLLRVGDYGNVWKLFKDVIRRG-PQPCKYTFSGIILGFCRKGCIHLGESL 78

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           L  M  +    + +    ++   C  G+   AL+ FN +I+ G                 
Sbjct: 79  LHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG----------------- 121

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
                          CN  +   TF  +I+ F K+  V +A +LFD + + GF+ +A MY
Sbjct: 122 ---------------CNPTV--VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR- 267
           + ++ G  K ++++ A  LY EM+  GI PD    + L++     G      +E   DR 
Sbjct: 165 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYG------REEDGDRL 218

Query: 268 --DVNTMTLLCN-SIMRILVSN----GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             D++ + LL + S+  I VS     G +D+A   L  M++               KG +
Sbjct: 219 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE---------------KG-L 262

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+  +F+ +I    + G  D A   ++ M   G   +    ++L+ GL  + RL+E+ E
Sbjct: 263 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 322

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L+ +M E G    +     +     +R DVVGA +L  +M  +G  P V   +  I  L 
Sbjct: 323 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 382

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G   EA+    +M+++G +P+   Y++ I G     +++ AL+L + +   G  PD+ 
Sbjct: 383 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 442

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             N+II GLCK  R+  A ++F +M   GL P + TYN LING+CK+ ++  A   ++RM
Sbjct: 443 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 502

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
               S +PD+ TY   I G C + R + A+++ +E+   G
Sbjct: 503 YASGS-NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 217/482 (45%), Gaps = 37/482 (7%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN ++YN ++ A C              M + G      T   ++  +C  G   +A 
Sbjct: 87  CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 146

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F+ + + G+    + ++ L+  + K  E+D+A  L E M    I  +  TF +L+ G 
Sbjct: 147 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 206

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R +   +L   ++  G   D +++D+ + GLC   +L+ A++   +M   G++P  
Sbjct: 207 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 266

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-----------CNSIMRILVSNGSI 289
              + +I + S  G          ED+      L+           C+S++  L  NG +
Sbjct: 267 IAFNSVIAAYSQAG---------LEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 317

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A  L+  MI+               KG +S N  +F ++++   K G +  A SL+ E
Sbjct: 318 QEATELIGQMIE---------------KG-LSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 361

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G   +V  ++  IDGL     +EE+Y +  EM   G  P +F  NS+    C+   
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL L + MR +G  P +    ++I  LCK G+   A     DM Q G  PDI+ Y+ 
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      +  A  L   + A G  PD+  YNI I G C ++R+  A  + +E+++ G
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541

Query: 530 LI 531
           ++
Sbjct: 542 IL 543



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 251/579 (43%), Gaps = 51/579 (8%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSK 147
           L  M++ G       +  L ++    G +     +F ++I  G    ++ FS +++ F +
Sbjct: 9   LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 68

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G +     L+  M   +   N   + ++I+    + R   AL  F+ M + G       
Sbjct: 69  KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 128

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           ++ +I   CK   +  A +L+  +K  G +P+                            
Sbjct: 129 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPN---------------------------- 160

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 ++ N++M   V    IDQA  L + M K               KG ++P+  +F
Sbjct: 161 -----AIMYNTLMNGYVKMREIDQANMLYEEMRK---------------KG-IAPDGITF 199

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+++   K G+ +    L ++++ +G + +  L++  + GLC + RL+E+ E L +M E
Sbjct: 200 NILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE 259

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+    NS+     +      A    + M   G  P     + L+  L  +G+  E
Sbjct: 260 KGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQE 319

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   +  M+++G   + + ++  +        V  A  L+ ++   G  PDVVA++  I 
Sbjct: 320 ATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFID 379

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL K   V EA ++F EM+ KGLIP+   YN LI G+CK G +++A L L +++      
Sbjct: 380 GLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA-LKLEKVMRHRGLL 438

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+ T   +I GLC  GR   AI ++ +M + G +P+ IT+  LI G CK      A   
Sbjct: 439 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 498

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              M   G  PD+  +   I  F S      A  +L E+
Sbjct: 499 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 199/485 (41%), Gaps = 61/485 (12%)

Query: 224 ALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           AL++   M+  G+ P      IL KL+    D G +  L K++   R         + I+
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR-RGPQPCKYTFSGII 63

Query: 281 RILVSNGSIDQAYNLLQAM--------------------IKGEPIADVGVEMLMIFKGTV 320
                 G I    +LL  M                    I+G     +    LMI +G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG-C 122

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P   +F+ +IN   K+G +  A  LF  + ++G   N  +YN L++G      ++++  
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM + G  P   T N +     +         L++ + V G  P      + +  LC
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
             G+  EA  FL DM+++G  P I+ +++ I         D A E ++ +   G  P   
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             + ++ GL    R+ EA +L  +MI KGL  +   + +L++ + K G++  A      M
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD- 619
            E+    PDV+ ++  IDGL   G  ++A  ++ EM  KG  PN   + +LI G CKC  
Sbjct: 363 -ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 620 ----------------------------------RPRAALVHFRMMKEKGMKPDMFVFVA 645
                                             R R+A+  F  M + G+ PD+  +  
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 646 LISAF 650
           LI+ +
Sbjct: 482 LINGY 486



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 38/290 (13%)

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           AL ++ +MR  G  P      +L K L + G     ++   D+++ G  P    +S  I 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G      + L   L   +    C P+  AYNI+I+  C   R ++A   FN MI +G  P
Sbjct: 65  GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIM 591
           +V T+N +IN +CK GN+ +A      +  KE G SP+ I Y TL++G       D A M
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGL--KEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 592 LWNEMEEKGCAPNRITFMAL-----------------------------------ITGLC 616
           L+ EM +KG AP+ ITF  L                                   ++GLC
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R   A+     M EKG+ P +  F ++I+A+        AFE  K M
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 292


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 266/585 (45%), Gaps = 49/585 (8%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y YN LLE+  K   V+ V    K+M   G     YT   L++  C+S   D A  +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+E+ + G   +E  F IL+  + K G  DK  EL+  M+   +  N+  +  ++  F +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM---------KG 233
           + R D + ++ +KM + G   D   ++  I  LCK  ++  A +++S+M         + 
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           + IT  + ++ K         +   L + I E+ D+ ++    N  ++ LV +G   +A 
Sbjct: 290 NSIT--YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY-NIWLQGLVRHGKFIEAE 346

Query: 294 NLLQAMIK---GEPI----------------ADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
            +L+ M     G  I                +D    + ++ +  V P+  ++  +++  
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              GK+D A SL +EM +  C+ N +  N L+  L    R+ E+ ELLR+M E G+    
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +   LC   ++  A+ +V+ MRV G                  G    ++  L D
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL--------------GNLGNSYIGLVD 512

Query: 455 --MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             +++   LPD++ YS  + GL    R   A  LF ++      PD VAYNI I   CK 
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            +++ A  +  +M  KG   S+ TYN LI G      I +    +  M EK   SP++ T
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISPNICT 631

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           Y T I  LC   + +DA  L +EM +K  APN  +F  LI   CK
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 162/614 (26%), Positives = 277/614 (45%), Gaps = 54/614 (8%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           +L  ++ ++  S   DKA   F  +           +++++LL +  K   V+    L +
Sbjct: 77  SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M  C I     TF +LI      S VD A +LFD+M + G   +   + +++ G CK  
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLC 276
             +  L+L + M+  G+ P+  I + +++S   EG   +   +V+++ E+  V  +    
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF- 255

Query: 277 NSIMRILVSNGSIDQA----------------------YNL-LQAMIKGEPIADVGVEML 313
           NS +  L   G +  A                      YNL L+   K   + D      
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            I +     +  S++I +  L++ GK   A ++ ++MT  G   +++ YN L+DGLC   
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            L ++  ++  M+ +G  P   T   +    C    V  A +L+++M      P      
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+  L K G+  EA   L  M ++G+  D V  +  + GL     +D A+E+ + +  H
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495

Query: 494 G-----------------------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           G                       C PD++ Y+ +++GLCKA R AEA++LF EM+ + L
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P    YN+ I+ +CK G I  A   L  M EK+     + TY +LI GL I  +  +  
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIKNQIFEIH 614

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L +EM+EKG +PN  T+   I  LC+ ++   A      M +K + P++F F  LI AF
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674

Query: 651 LSELNPPLAFEVLK 664
               +  +A EV +
Sbjct: 675 CKVPDFDMAQEVFE 688



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 161/684 (23%), Positives = 291/684 (42%), Gaps = 69/684 (10%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           + RR+  +  L +D+V   C ++P    F  LIR L     V+ A  LFD++  +G C P
Sbjct: 124 KERRVEFVSWLYKDMV--LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKP 180

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N +++  L+   CK+   D     L  M+ +G   +K     ++  +C  G+ D +  + 
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI----RLNEKTFCVLIHG 179
            ++ + G V + V F+  + A  K G+V  A  +   M+        R N  T+ +++ G
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K   ++ A  LF+ + ++   +    Y++ + GL ++ +   A  +  +M   GI P 
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360

Query: 240 FEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
               + L+         SD   +  L+K      D  T   L +    +    G +D A 
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV----GKVDAAK 416

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +LLQ M++   +                PN  + +I++++L K G++  A  L R+M + 
Sbjct: 417 SLLQEMMRNNCL----------------PNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK---------------------- 391
           G   +    N ++DGLC S  L+++ E+++ M   G                        
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520

Query: 392 -PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T +++   LC+      A NL  +M  +  +P      + I   CK GK   AFR
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L DM ++G    +  Y++ I GL    ++     L  ++   G  P++  YN  I  LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML----EKESG 566
           + ++V +A +L +EM+ K + P+V ++  LI  +CK  + D A       +    +KE  
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG- 699

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
                 Y+ + + L  AG+   A  L   + ++G       +  L+  LCK D    A  
Sbjct: 700 -----LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
               M ++G   D    + +I   
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGL 778



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 5/351 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++P T +F+++I  L     +D A  LF EM + GC  N F +  L+ G C +   ++  
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ELL  ME  G  P     N++    CR      +  +V KMR +G  P +      I  L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262

Query: 440 CKHGKAMEAFRFLTDMVQEGFL----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           CK GK ++A R  +DM  + +L    P+ + Y+  + G   +  ++ A  LF  I  +  
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              + +YNI + GL +  +  EAE +  +M  KG+ PS+ +YN+L++G CK G +  A  
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            +  ++++    PD +TY  L+ G C  G+ D A  L  EM    C PN  T   L+  L
Sbjct: 383 IVG-LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            K  R   A    R M EKG   D      ++           A E++K M
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 223/522 (42%), Gaps = 56/522 (10%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAA---MYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           F K + +DKA   F ++ +S F  +     +Y++++    K +++E    LY +M   GI
Sbjct: 85  FAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI 143

Query: 237 TPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
            P     + LI     +SC D      L  E+ E +           ++R     G  D+
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARE--LFDEMPE-KGCKPNEFTFGILVRGYCKAGLTDK 200

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
              LL AM   E                V PN   ++ I+++  ++G+ D +  +  +M 
Sbjct: 201 GLELLNAM---ESFG-------------VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF----KPTHFTLNSMFRCLCRR 407
           + G + ++  +N+ I  LC   ++ ++  +  +ME   +    +P   T N M +  C+ 
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A  L   +R       ++   + ++ L +HGK +EA   L  M  +G  P I  Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  + GL  +  +  A  +   +  +G CPD V Y  ++ G C   +V  A+ L  EM+ 
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
              +P+  T N+L++   K G I +A   L +M EK  G  D +T   ++DGLC +G  D
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL-DTVTCNIIVDGLCGSGELD 483

Query: 588 DAIMLWNEME-----------------------EKGCAPNRITFMALITGLCKCDRPRAA 624
            AI +   M                        E  C P+ IT+  L+ GLCK  R   A
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              F  M  + ++PD   +   I  F  +     AF VLK+M
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 242/542 (44%), Gaps = 49/542 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            +++    VGL+E+A  LF+ + RE   + +  SYN  L+ L +       E  LK+M D
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESI-RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G G   Y+   L+   C  G    A ++   +  +G   + V +  LL  +   G+VD 
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M   N   N  T  +L+H   K  R+ +A +L  KM + G+  D    ++I+ 
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVN 270
           GLC + +L+ A+++   M+  G       L  L  S      + L+   + E+    D+ 
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAA----LGNLGNSY-----IGLVDDSLIENNCLPDLI 525

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T + L N + +     G   +A NL   M+ GE +                P++ +++I 
Sbjct: 526 TYSTLLNGLCKA----GRFAEAKNLFAEMM-GEKL---------------QPDSVAYNIF 565

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   K GK+  A  + ++M + GC +++  YN+LI GL   N++ E + L+ EM+E G 
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N+  + LC  + V  A NL+ +M  +   P V     LI+  CK    +  F 
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VPDF- 680

Query: 451 FLTDMVQEGFLPDI-VC------YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              DM QE F   + +C      YS     L+   ++  A EL   +   G       Y 
Sbjct: 681 ---DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++  LCK   +  A  + ++MI +G     A    +I+G  K GN  +A     +M+E 
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797

Query: 564 ES 565
            S
Sbjct: 798 AS 799


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/596 (25%), Positives = 257/596 (43%), Gaps = 85/596 (14%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V++A  LF+++ R     P  + +N +L +L KS     V    ++M+  G   +     
Sbjct: 66  VDDAVSLFNRLLRRN-TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
            L+  +C  G    A SVF +I+  G+V + +                            
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTI---------------------------- 156

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
                 TF  L  G   K ++ +A    DK+   GF  D   Y  +I GLCK  +   AL
Sbjct: 157 ------TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L   + G+ + P+                                  ++ N+I+  +  
Sbjct: 211 DLLQRVDGNLVQPN---------------------------------VVMYNTIIDSMCK 237

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +++A++L   M+                KG +SP+  ++  +I+     GKL  A+ 
Sbjct: 238 VKLVNEAFDLFSEMVS---------------KG-ISPDVVTYSALISGFCILGKLKDAID 281

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF +M       +V+ +N L++  C   +++E   +   M + G KP   T NS+    C
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             ++V  A ++   M   G  P ++  +++I   CK  K  EA     +M ++  +PD+V
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS+ I GL    R+  AL+L   +   G  P++  YN I+  LCK  +V +A  L  + 
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             KG  P ++TY++LI G C+SG ++ A      +L K   + DV  YT +I G C+ G 
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTIMIQGFCVEGL 520

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            ++A+ L ++ME+ GC P+  T+  +I  L K D    A    R M  +G+  + +
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 229/478 (47%), Gaps = 23/478 (4%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F   + VD A+ LF+++ +      A  ++ I+G L K+K     L L  +M+  GI P+
Sbjct: 60  FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119

Query: 240 FEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               + LI      G      ++  K +      +T+T    ++ + L   G I QA+  
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITF--TTLSKGLCLKGQIQQAF-- 175

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
               +  + +  +G     I  GT          +I+ L K G+   AL L + +     
Sbjct: 176 ----LFHDKVVALGFHFDQISYGT----------LIHGLCKVGETRAALDLLQRVDGNLV 221

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             NV +YN +ID +C    + E+++L  EM   G  P   T +++    C    +  A++
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAID 281

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  KM ++  +P V    +L+   CK GK  E       M+++G  P+ V Y++ + G  
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            +K V+ A  +F  +   G  PD+ +Y+I+I+G CK ++  EA +LF EM  K +IP V 
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY+ LI+G  KSG I  A+  + +M ++    P++ TY +++D LC   + D AI L  +
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDR-GVPPNICTYNSILDALCKTHQVDKAIALLTK 460

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            ++KG  P+  T+  LI GLC+  +   A   F  +  KG   D++ +  +I  F  E
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S+     T   +  +D A+SLF  + +       F +N ++  L  S        L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           ++ME  G KP     N +  C C+   +  A ++  K+   G+ P     T L K LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  +AF F   +V  GF  D + Y   I GL  +     AL+L + +  +   P+VV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N II  +CK + V EA DLF+EM++KG+ P V TY+ LI+G+C  G +  A+   ++M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            E+  PDV T+  L++  C  G+  +   +++ M ++G  PN +T+ +L+ G C      
Sbjct: 289 -ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A   F  M + G+ PD+  +  +I+ F        A  + KEM
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 20/396 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  VG    A  L  +V    L  PN   YN +++++CK   V+       E
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGN-LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGE 150
           M   G   D  T + L+  +C  G+   A+ +FN+ I+++   D + F+IL+ AF K G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + +   + + M    I+ N  T+  L+ G+     V+KA  +F+ M + G   D   Y +
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRD 268
           +I G CK K+ + A+ L+ EM    I PD    S LI   S  G ++  ++ +    DR 
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V       NSI+  L     +D+A  LL          D G +          P+ S++ 
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKF------KDKGFQ----------PDISTYS 474

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I  L + GKL+ A  +F ++   G   +V+ Y  +I G C      E+  LL +ME++
Sbjct: 475 ILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDN 534

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           G  P   T   +   L ++ +   A  L+R+M  +G
Sbjct: 535 GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 28/341 (8%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  LI     +G +++A  LF+++  E +  P+ Y++N L+ A CK   +   
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI-KPDVYTFNILVNAFCKDGKMKEG 314

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
           +     M   G   +  T   L+  YC   + +KA S+FN +   G   D   +SI++  
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F K  + D+A  L + M   NI  +  T+  LI G  K  R+  ALQL D+M   G   +
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y+ I+  LCK  Q++ A+ L ++ K  G  PD    S LI      G+L    ++++
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED-ARKVF 493

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSID-QAYNLLQAMIKGEPIADVGVEMLMIFKGTVS-- 321
           ED               +LV   ++D  AY +   MI+G  +  +  E L +        
Sbjct: 494 ED---------------LLVKGYNLDVYAYTI---MIQGFCVEGLFNEALALLSKMEDNG 535

Query: 322 --PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             P+  +++III +L K  + D+A  L REM   G   N +
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 261/588 (44%), Gaps = 57/588 (9%)

Query: 52  LFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LF+++ R G     PN  +Y  ++    +   +DL    +  +   G        +PLL+
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK 142

Query: 110 VYCNSGQFDKALS-VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
             C+  +   A+  V   + + G   D   ++ILL          +A +L+  M D   R
Sbjct: 143 GLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR 202

Query: 168 --LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
             L+   +  +I+G +++ ++DKA  LFD M   G + D   Y  II  L K + ++ A 
Sbjct: 203 CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKAT 262

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           Q+++ M  +G+ PD  + + L+                            C+S       
Sbjct: 263 QVFTRMVKNGVMPDCIMYTSLVHG-------------------------YCSS------- 290

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                           G+P   +G+   M   G V P+  ++  +++ L K+GK   A  
Sbjct: 291 ----------------GKPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEARK 333

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           +F  + + G   +   Y  L+ G      L E ++LL  M + G +  H   N +     
Sbjct: 334 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 393

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +   V  AL +   MR QG  P + +   ++  LC  G+  +A      +  EG  P+IV
Sbjct: 394 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 453

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            ++  I GL    + D   EL  ++   G C D + +N I+  LCK  RV EA++LF+ M
Sbjct: 454 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  G+ P+  TYN LI+G+C  G +D+AM  L  M+      P  +TY T+I+G    GR
Sbjct: 514 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV-KPSDVTYNTIINGYSQNGR 572

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMK 632
            +D + L  EM+ KG  P  +T+  L+ GL +  R  AA  ++ RM+K
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 240/587 (40%), Gaps = 88/587 (14%)

Query: 120 ALSVFNEIIDHGWVDEH----VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           A+S+FN +   G          + I++    + G +D A   + R+    +R++   F  
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 176 LIHGFVKKSRVDKALQL-FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           L+ G   + R   A+ +   +M + G   D   Y +++ GLC +K  + AL L   M   
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIM--- 196

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
                             +G   L         DV   T + N ++R     G +D+AY+
Sbjct: 197 ---------------ADHKGRCPL---------DVVAYTTVINGLLR----EGQLDKAYS 228

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L  AM+   P                SP+  ++  II+ L K   +D A  +F  M + G
Sbjct: 229 LFDAMLDRGP----------------SPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            M +  +Y +L+ G C+S + +E+  + ++M   G +P   T  ++   LC+      A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 415 NLVRKMRVQGHEP-WVKHNTLL----------------------------------IKEL 439
            +   +  +GH+P    + TLL                                  +   
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            KH K  EA    ++M Q+G  PDIV Y   +  L    RVD AL  F  + + G  P++
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V +  +I GLC   +  + E+L  EMI +G+      +N ++   CK G + +A      
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+ +    P+  TY TLIDG C+ G+ D+A+ L   M   G  P+ +T+  +I G  +  
Sbjct: 513 MV-RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNG 571

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R    L   R M  KG+ P +  +  L+           A E+   M
Sbjct: 572 RIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 191/437 (43%), Gaps = 57/437 (13%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K RC +   A   +I  L   G +++A  LFD +   G   P+  +Y+ ++ AL K+ ++
Sbjct: 200 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS-PDVVTYSSIISALSKTQAM 258

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG----------- 131
           D        M   G   D    T L+  YC+SG+  +A+ +F ++  HG           
Sbjct: 259 DKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTAL 318

Query: 132 -------------------------WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
                                      D   +  LL  ++  G + +  +L++ M    +
Sbjct: 319 MDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM 378

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           +L    F +++  + K ++VD+AL +F  M + G   D   Y  ++  LC   +++ AL 
Sbjct: 379 QLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALS 438

Query: 227 LYSEMKGSGITPDFEILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            ++ +K  G+ P+  + + LI    +C    ++  L  E+  DR +   T+  N+IM  L
Sbjct: 439 QFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMI-DRGICLDTIFFNAIMGNL 497

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G + +A NL   M++      +G+E          PNT++++ +I+    DGK+D A
Sbjct: 498 CKKGRVIEAKNLFDLMVR------IGIE----------PNTNTYNTLIDGYCLDGKMDEA 541

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           + L   M   G   +   YN +I+G   + R+E+   LLREM+  G  P   T   + + 
Sbjct: 542 MKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQG 601

Query: 404 LCRRQDVVGALNLVRKM 420
           L +    V A  L  +M
Sbjct: 602 LFQAGRTVAAKELYLRM 618


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 273/612 (44%), Gaps = 59/612 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           + +A  +FD++    L V +  +YN L++  CK   +D      + M++     +  T  
Sbjct: 227 IRDAEKMFDEMCNINL-VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            LL   C   +  +A S+  E+  +G++ D + +SIL     +  + + A EL E+  + 
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            IR+N  T  +L++G  K+ +V+KA ++  K T++G  +D  +Y+  + G C+   +  A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL---VKEIWEDRDVNTMTLLCNSIMR 281
           +     M+  G+ P+    + LI    D  E+      VK++ E + V       N+++ 
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE-KGVTPSVETYNTLID 464

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                 + D+ + +L+ M       ++GV+          PN  S+  +IN L KDGK+ 
Sbjct: 465 GYGKLCTFDRCFQILEQM------EEIGVK----------PNVVSYGSLINCLCKDGKIL 508

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  + R+M   G + N  +YN LIDG C   +++++     EM  S   PT  T N   
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYN--- 565

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                                           +LI  LCK GK  EA  FLT +   G  
Sbjct: 566 --------------------------------VLIDGLCKKGKLTEAEDFLTQITSSGHS 593

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD++ Y++ I G  +   V   L L+  +   G  P V  Y+ +ISG C  + +   E L
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKL 652

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           +NEM+   L+P    YN +I+ + + GN  +A      ML+ +   PD +TY +LI G  
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLD-QGIHPDKMTYNSLILGHF 711

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G+  +   L N M+ K  AP   T+  L+ G C       A V +R M E    P+  
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771

Query: 642 VFVALISAFLSE 653
           +   L +    E
Sbjct: 772 ICNELTAGLEQE 783



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 261/583 (44%), Gaps = 64/583 (10%)

Query: 113 NSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           N  QF K + +F EI + G+  D  +++  + A  K   +    E ++ M    +R N  
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF 212

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            + VLI G  ++ R+  A ++FD+M           Y+ +I G CK  +L+ A ++   M
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272

Query: 232 KGSGITPDFEILSKLITSC---SDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVS 285
           K   + P+    + L++         E   L+KE+  +    D  T ++L + ++R    
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG++ + Y   QA  KG                 +  N  +  I++N L K GK++ A  
Sbjct: 333 NGAM-ELYE--QATEKG-----------------IRINNYTGSILLNGLCKQGKVEKAEE 372

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           + ++ T+ G + +  +YN  ++G C    + ++   +  ME  G +P   T NS+    C
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFC 432

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVK-HNTL------------------------------ 434
             +++  A   V+KM  +G  P V+ +NTL                              
Sbjct: 433 DMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVV 492

Query: 435 ----LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI  LCK GK +EA   L DM+  G LP+   Y+  I G   + +V  AL  F ++
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
                 P +V YN++I GLCK  ++ EAED   ++ + G  P V TYN LI+G+  +GN+
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +  L L   ++     P V TY  LI G C     +    L+NEM +    P+R+ + A
Sbjct: 613 SKC-LGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNA 670

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I    +    + A    + M ++G+ PD   + +LI     E
Sbjct: 671 MIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFRE 713



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 273/604 (45%), Gaps = 32/604 (5%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L R +RI     +  ++       S      LI     VG ++ A  + +++K + +  P
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV-AP 279

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ--VYCNSGQFDKALS 122
           N  ++N LL  LCK   +      LKEM+  G+  D YT + L    + C+ G  + A+ 
Sbjct: 280 NIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAME 337

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           ++ +  + G  ++ +  SILL    K G+V+KA E++++  +  +  +E  +   ++G+ 
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   ++KA+   ++M   G   ++  ++ +I   C  K+++ A +   +M   G+TP  E
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 242 ILSKLITS----CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + LI      C+ +    +L  E  E+  V    +   S++  L  +G I +A  +L+
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQIL--EQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515

Query: 298 AMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            MI +G                 V PN   ++++I+     GK+  AL  F EM +    
Sbjct: 516 DMICRG-----------------VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +  YN LIDGLC   +L E+ + L ++  SG  P   T NS+        +V   L L
Sbjct: 559 PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGL 618

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M+  G +P V+    LI    K G  +   +   +M+Q   LPD V Y+A I    +
Sbjct: 619 YETMKNLGIKPTVRTYHPLISGCSKEGIEL-VEKLYNEMLQMNLLPDRVVYNAMIHCYAE 677

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I     A  L + +   G  PD + YN +I G  +  +++  +DL N M  K L P   T
Sbjct: 678 IGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADT 737

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++L+ G C   +   A +    M+E  +  P+      L  GL   GR  +  ++ +EM
Sbjct: 738 YDILVKGHCDLKDFSGAYVWYREMVEN-NFLPNASICNELTAGLEQEGRLQEVQVICSEM 796

Query: 597 EEKG 600
             KG
Sbjct: 797 NVKG 800



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 217/511 (42%), Gaps = 87/511 (17%)

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           V + +  K + LF ++  SGF +D  MY   I    K + L+M ++    M+  G+ P+ 
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTM-TLLCNSIMRILVSNGSIDQAYNLLQAM 299
            I + LI     E  +          RD   M   +CN                NL+ ++
Sbjct: 212 FIYNVLIGGLCREKRI----------RDAEKMFDEMCN---------------INLVGSI 246

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                         +++ +I+   K G+LD A  +   M +     N+
Sbjct: 247 V-------------------------TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +N+L+ GLC   +++E+  LL+EME +GF P  +T + +F  L R  D  GA+ L  +
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
              +G        ++L+  LCK GK  +A   L    + G + D V Y+  + G   I  
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A+     + + G  P+ + +N +I   C  + + +AE+   +M  KG+ PSV TYN 
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 540 LINGW-----------------------------------CKSGNIDQAMLCLSRMLEKE 564
           LI+G+                                   CK G I +A + L  M+ + 
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR- 520

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+   Y  LIDG C+ G+  DA+  ++EM     +P  +T+  LI GLCK  +   A
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
                 +   G  PD+  + +LIS + +  N
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANAGN 611



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 2/275 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVV-GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           P   TL+ M   +C +  ++  A+ L   MR  G  P +   +LL   L    + ++   
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              ++   GF  D   Y+ AI   + ++ + + +E    +   G  P+V  YN++I GLC
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           + +R+ +AE +F+EM    L+ S+ TYN LI+G+CK G +D A     RM EK S +P++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK-SVAPNI 281

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           IT+ +L+ GLC   +  +A  L  EME  G  P+  T+  L  GL +CD    A+  +  
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             EKG++ + +    L++    +     A E+LK+
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 234/547 (42%), Gaps = 64/547 (11%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + F  L+  L  +  ++EA  L  +++  G  +P+ Y+Y+ L + L + C     
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGF-MPDGYTYSILFDGLLR-CDDGNG 334

Query: 86  EMRLKEM-QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV 143
            M L E   + G   + YT + LL   C  G+ +KA  +  +  ++G V DE +++  + 
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            + + G+++KA   IERM+   +R N  TF  LI  F     +DKA +   KM + G   
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
               Y+ +I G  K    +   Q+  +M+  G+ P+      LI     +G++  L  EI
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI--LEAEI 512

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGT 319
                     +L + I R ++ N    Q YN+L   I G  +     + L  F    +  
Sbjct: 513 ----------VLRDMICRGVLPNA---QVYNML---IDGSCMVGKVKDALRFFDEMMRSE 556

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP   +++++I+ L K GKL  A     ++T  G   +V  YN+LI G  N+  + +  
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616

Query: 380 ELLREMEESGFKPTHFTL----------------------------------NSMFRCLC 405
            L   M+  G KPT  T                                   N+M  C  
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYA 676

Query: 406 RRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
              +   A +L + M  QG H   + +N+L++    + GK       + +M  +   P  
Sbjct: 677 EIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF-REGKLSNIKDLVNNMKAKELAPKA 735

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y   + G  D+K    A   +R++  +   P+    N + +GL +  R+ E + + +E
Sbjct: 736 DTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSE 795

Query: 525 MITKGLI 531
           M  KG+I
Sbjct: 796 MNVKGII 802



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 170/372 (45%), Gaps = 2/372 (0%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDG 338
           ++IL+     + AY+L +++I  +       ++   F     P   +  D++++   K  
Sbjct: 61  LQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSK 120

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L  A+ L+  M + G + ++   + L   L N  +  +  +L  E+E SGF+   F   
Sbjct: 121 MLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYA 180

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
              +   + Q++   +  +  MR +G  P V    +LI  LC+  +  +A +   +M   
Sbjct: 181 KAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNI 240

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             +  IV Y+  I G   +  +D A ++   +      P+++ +N ++SGLCK +++ EA
Sbjct: 241 NLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEA 300

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             L  EM   G +P   TY++L +G  +  + + AM    +  EK     +  T + L++
Sbjct: 301 RSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK-GIRINNYTGSILLN 359

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  G+ + A  +  +  E G   + + +   + G C+      A++    M+  G++P
Sbjct: 360 GLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRP 419

Query: 639 DMFVFVALISAF 650
           +   F +LI  F
Sbjct: 420 NSITFNSLIDKF 431



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 62/147 (42%), Gaps = 1/147 (0%)

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DLF E+   G       Y   I    K  N+   M  L  M  K    P+V  Y  LI G
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSM-RKRGVRPNVFIYNVLIGG 220

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC   R  DA  +++EM       + +T+  LI G CK     AA      MKEK + P+
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  F +L+S          A  +LKEM
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEM 307


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 233/555 (41%), Gaps = 84/555 (15%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +N +L ++ K           K+M   G      TL+ L+  YC+ G    A S
Sbjct: 75  LPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFS 134

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           V   ++  G+                                  +LN  T   ++ G   
Sbjct: 135 VLGMVLKRGY----------------------------------QLNAITLTTIMKGLCI 160

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V KAL+  D +   GF  D   Y  +I GLCK      A +L  +M+G  + P+  I
Sbjct: 161 NGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVI 220

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + ++     +G +T       E RD+                                 
Sbjct: 221 YNMIVDGLCKDGLVT-------EARDL--------------------------------- 240

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
              +DV      + +G + P+  ++  +I+     G+      L  +M       NV+ Y
Sbjct: 241 --YSDV------VGRG-IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LID LC    L +++++   M E G +P   T N++    C   DVV A  L      
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P V    +LI   CK+ +  EA      M  +   P+IV YS+ I GL    R+  
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A ELF  I   G  P+V+ YNI++  LCK Q V +A +LFN M  +GL P+V++YN+LIN
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+CKS  ID+AM     M  + +  PD +TY  LIDGLC +GR   A  L+N M + G  
Sbjct: 472 GYCKSKRIDEAMNLFEEM-HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530

Query: 603 PNRITFMALITGLCK 617
            + IT+  L     K
Sbjct: 531 VDVITYNILFDAFSK 545



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 233/489 (47%), Gaps = 28/489 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A+ LF ++           +++I+G + K K    A+ L  +M   GITP    LS 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 246 LITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G +    ++L   +     +N +TL   +IM+ L  NG + +A     +++ 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITL--TTIMKGLCINGEVRKALEFHDSVVA 176

Query: 302 GEPIAD-------------VGV-----EMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDL 342
              + D             +G+     E+L   +G  V PN   +++I++ L KDG +  
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L+ ++   G   +VF Y  LI G C   +  E   LL +M +       +T N +  
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
            LC++  +  A ++   M  +G  P  V  NTL+    C +   +EA +      + G  
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLM-SGYCLYNDVVEARKLFDTFAECGIT 355

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y+  I G     R+D AL LF  +      P++V Y+ +I GLCK+ R++ A +L
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+ +   G  P+V TYN++++  CK   +D+A+   + M E+   +P+V +Y  LI+G C
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER-GLTPNVSSYNILINGYC 474

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            + R D+A+ L+ EM  +   P+ +T+  LI GLCK  R   A   F +M + G   D+ 
Sbjct: 475 KSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVI 534

Query: 642 VFVALISAF 650
            +  L  AF
Sbjct: 535 TYNILFDAF 543



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 184/381 (48%), Gaps = 20/381 (5%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           G LI  L  +GL  EA  L    K EG  V PN   YN +++ LCK   V        ++
Sbjct: 187 GTLINGLCKIGLTREAFELLH--KMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDV 244

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEV 151
              G   D +T T L+  +C  GQ+ +   +  +++D    ++ + ++IL+ A  K G +
Sbjct: 245 VGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGML 304

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            KA ++   M +   R +  TF  L+ G+   + V +A +LFD   + G   D   Y+++
Sbjct: 305 GKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNIL 364

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I G CKN +++ AL L+++M    + P+    S LI      G ++      WE      
Sbjct: 365 IIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY----AWE------ 414

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDII 330
              L ++I     S   I   YN++   +    + D  +E+  ++F+  ++PN SS++I+
Sbjct: 415 ---LFSAIHDGGPSPNVI--TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN   K  ++D A++LF EM +   + +   YN LIDGLC S R+  ++EL   M + G 
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGP 529

Query: 391 KPTHFTLNSMFRCLCRRQDVV 411
                T N +F    + Q V+
Sbjct: 530 PVDVITYNILFDAFSKIQHVI 550


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 217/482 (45%), Gaps = 49/482 (10%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A+  F++M +         ++ ++  + K K     L L  +M   GI P+   L  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           LI S                          C+      ++ G I +A +L   MI GE  
Sbjct: 102 LINS-------------------------FCH------LNRGKIGEALHLFDKMI-GEGF 129

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                           P+  ++  +IN L K G    A+ L   M Q  C  NVF YN +
Sbjct: 130 ---------------RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 174

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           ID LC   ++ E++ L  EM   G  P  FT NS+   LC   +      L+ +M     
Sbjct: 175 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 234

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG-FLPDIVCYSAAIGGLIDIKRVDLAL 484
            P V     ++  LCK GK  EA   +  M+Q G  +P+++ Y+  I G   I+R+D A+
Sbjct: 235 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAM 294

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF ++C     PD V Y+ +I GLC  +R+ +A  LF+EM+    IP++ TY +L++  
Sbjct: 295 YLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYL 354

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK+  + +AM  L + +E  +  PD+      IDG+C AG  + A  L++ +  KG  P+
Sbjct: 355 CKNRYLAEAMALL-KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 413

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             T+  +I GLC+      A   FR M E G   +  ++  +   FL       A ++L+
Sbjct: 414 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 473

Query: 665 EM 666
           EM
Sbjct: 474 EM 475



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 217/495 (43%), Gaps = 54/495 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC--NSGQFDKAL 121
           P+   +N LL ++ K      +     +M  +G   + YTL  L+  +C  N G+  +AL
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +F+++I  G+                                  R +  T+  LI+G  
Sbjct: 119 HLFDKMIGEGF----------------------------------RPDVVTYGTLINGLC 144

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K      A++L   M +     +   Y+ II  LCK++Q+  A  L+SEM   GI+PD  
Sbjct: 145 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 204

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI +  +  E   +   + E  D   M   +  N+++  L   G + +A++++  M
Sbjct: 205 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 264

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I+               +G   PN  S++ +IN   K  ++D A+ LF EM +   + + 
Sbjct: 265 IQ---------------RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 309

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ LI GLC+  RL+++  L  EM      P   T   +   LC+ + +  A+ L++ 
Sbjct: 310 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 369

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +     +P ++ N + I  +C+ G+   A    +++  +G  PD+  YS  I GL     
Sbjct: 370 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 429

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A +LFR++  +GC  +   YN I  G  +    + A  L  EM+ +G     +T  L
Sbjct: 430 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 489

Query: 540 LINGWCKSGNIDQAM 554
            +      G +DQ++
Sbjct: 490 FVKMLSDDG-LDQSL 503



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 160/341 (46%), Gaps = 5/341 (1%)

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G +ML +    +S + + F    +  L    +D A+S F  M ++    +   +N L+  
Sbjct: 14  GTQMLSLLAHFLSLSHNRFH---SKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHE 426
           +           L  +M+  G  P  +TL+ +    C   R  +  AL+L  KM  +G  
Sbjct: 71  IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFR 130

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V     LI  LCK G    A R L  MVQ+   P++  Y+  I  L   ++V  A  L
Sbjct: 131 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 190

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F ++   G  PD+  YN +I  LC          L NEM+   ++P V ++N +++  CK
Sbjct: 191 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 250

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G + +A   + +M+++    P+VI+Y TLI+G C   R D A+ L+ EM  +   P+ +
Sbjct: 251 EGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 310

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           T+  LI GLC  +R + A+  F  M      P++  +  L+
Sbjct: 311 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 189/427 (44%), Gaps = 52/427 (12%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L  VG    A  L   + ++  C PN ++YN ++++LCK   V        EM 
Sbjct: 137 GTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVD 152
             G   D +T   L+   CN  ++    ++ NE++D   + + V F+ ++ A  K G+V 
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 153 KACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           +A +++++M        N  ++  LI+G+ K  R+DKA+ LF +M +     D   Y  +
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I GLC  ++L+ A+ L+ EM      P+                  L+   I  D     
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPN------------------LVTYRILLD----- 352

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                      L  N  + +A  LL+A I+G                 + P+    +I I
Sbjct: 353 ----------YLCKNRYLAEAMALLKA-IEG---------------SNLDPDIQVNNIAI 386

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + + + G+L+ A  LF  ++  G   +V+ Y+ +I+GLC    L+E+ +L REM+E+G  
Sbjct: 387 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 446

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                 N++ R   R  +   A+ L+++M  +G        TL +K L   G      + 
Sbjct: 447 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 506

Query: 452 LTDMVQE 458
           L D  ++
Sbjct: 507 LRDFCKQ 513



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
            L  ++V S+      +   ++  L   G V EA+ + D++ + G C+PN  SYN L+  
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-- 133
            CK   +D       EM       D  T + L+   C+  +   A+++F+E++    +  
Sbjct: 284 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 343

Query: 134 ----------------------------------DEHVFSILLVAFSKWGEVDKACELIE 159
                                             D  V +I +    + GE++ A +L  
Sbjct: 344 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 403

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +    ++ +  T+ ++I+G  ++  +D+A +LF +M ++G   +  +Y+ I  G  +N 
Sbjct: 404 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +   A+QL  EM   G + D   ++  +   SD+G L   +K+I  D
Sbjct: 464 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLKQILRD 509


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 263/585 (44%), Gaps = 64/585 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I      GL E+A   F ++   G C P+   YN +L+AL       ++      M+  
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFG-CKPSVKIYNHVLDALLSENKFQMINGIYNNMKRD 172

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + YT   LL+  C + + D A  +  E+   G + + V ++ ++ +  + G+V++A
Sbjct: 173 GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA 232

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  R     I+     +  LI+GF ++ ++++  +LF++M   G   D   Y  +I  
Sbjct: 233 RELSMR-----IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINT 287

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVN 270
           L +   +EMAL + ++M   G +P+    + L+      G     L L  + I E  + N
Sbjct: 288 LSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPN 347

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T+    N+++  L S G + +A ++ Q M                 +  V PN +++  +
Sbjct: 348 TVAY--NTLIHGLCSYGKMVEAVSVSQKM----------------ERNGVFPNETTYSTL 389

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   K G L  A  ++ +M   GC+ NV +Y  ++D LC ++    +  L+  M     
Sbjct: 390 IDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC 449

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T N+  + LC                                  C  GK   A +
Sbjct: 450 PPNTITFNTFIKGLC----------------------------------CS-GKTEWAMK 474

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L  M Q G  P++  Y+  + GL + KR   AL++  +I       ++V YN I+SG C
Sbjct: 475 VLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFC 534

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            A     A  +  +++  G  P   TYN +I  +CK G +  A+  + R+ +K  G PDV
Sbjct: 535 HAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDV 594

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            TYT+L+ G+C     D+A++  ++M  +G  PNR T+ AL+ GL
Sbjct: 595 FTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 275/603 (45%), Gaps = 50/603 (8%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  +++ L     +D ++  L+ M+  G   ++     ++  Y  +G  ++AL  F  I
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134

Query: 128 IDHG-----WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + G      +  HV   LL + +K+  ++    +   M    I LN  T+ +L+    K
Sbjct: 135 GEFGCKPSVKIYNHVLDALL-SENKFQMING---IYNNMKRDGIELNVYTYNMLLKALCK 190

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RVD A +L  +M+  G   DA  Y  ++  +C+  ++E A +L   M+     P   +
Sbjct: 191 NDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---V 245

Query: 243 LSKLITSCSDEGELTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQA 292
            + LI     E ++    +E++E          D DV T + + N++  +    G+++ A
Sbjct: 246 YNALINGFCREHKM----EEVFELFNEMAVEGIDPDVITYSTVINTLSEM----GNVEMA 297

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             +L  M                F    SPN  +F  ++      G+L  AL L+  M Q
Sbjct: 298 LAVLAKM----------------FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQ 341

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   N   YN LI GLC+  ++ E+  + ++ME +G  P   T +++     +  D+VG
Sbjct: 342 EGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVG 401

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  +  KM   G  P V   T ++  LC++     A   + +M      P+ + ++  I 
Sbjct: 402 ASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIK 461

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL    + + A+++   +  +GC P+V  YN ++ GL  A+R  EA  +  E+    +  
Sbjct: 462 GLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKS 521

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           ++ TYN +++G+C +G    A+    ++L   +  PD ITY T+I   C  G    AI L
Sbjct: 522 NLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT-KPDSITYNTVIYAYCKQGEVKTAIQL 580

Query: 593 WNEMEEKGCA-PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            + + +KG   P+  T+ +L+ G+C       A+VH   M  +G+ P+   + AL+    
Sbjct: 581 VDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLF 640

Query: 652 SEL 654
           S+L
Sbjct: 641 SKL 643



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 193/420 (45%), Gaps = 27/420 (6%)

Query: 257 TLLVKEIWEDRDVNTMTLL----------CNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           T ++K +  +RD++ +  L          CN  + ++V N +  +A    QA+     I 
Sbjct: 77  TTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVIN-AYRRAGLAEQALKTFYRIG 135

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           + G +          P+   ++ +++ LL + K  +   ++  M + G   NV+ YN L+
Sbjct: 136 EFGCK----------PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLL 185

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             LC ++R++ + +LL EM   G  P   +  ++   +CR   V  A  L   MR++   
Sbjct: 186 KALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFV 243

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P       LI   C+  K  E F    +M  EG  PD++ YS  I  L ++  V++AL +
Sbjct: 244 PVY---NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAV 300

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              +   GC P+V  +  ++ G     R+ EA DL+N MI +G  P+   YN LI+G C 
Sbjct: 301 LAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCS 360

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G + +A + +S+ +E+    P+  TY+TLIDG   AG    A  +WN+M   GC PN +
Sbjct: 361 YGKMVEA-VSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVV 419

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  ++  LC+      AL     M      P+   F   I           A +VL +M
Sbjct: 420 VYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM 479



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 181/402 (45%), Gaps = 24/402 (5%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EE   LF+++  EG+  P+  +Y+ ++  L +  +V++    L +M   G   + +T T
Sbjct: 259 MEEVFELFNEMAVEGI-DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFT 317

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L++ Y   G+  +AL ++N +I  G     V ++ L+     +G++ +A  + ++M+  
Sbjct: 318 SLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERN 377

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  NE T+  LI GF K   +  A ++++KM  +G   +  +Y  ++  LC+N     A
Sbjct: 378 GVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHA 437

Query: 225 LQLYSEMKGSGITPDFEILSKLITS--CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           L L   M      P+    +  I    CS + E  + V                N ++  
Sbjct: 438 LHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDG 497

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADV--------GVEMLMIFKGTVS-----------PN 323
           L +     +A  ++  + + E  +++        G     +FKG +            P+
Sbjct: 498 LFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPD 557

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYELL 382
           + +++ +I    K G++  A+ L   +T+ G    +VF Y +L+ G+CN   ++E+   L
Sbjct: 558 SITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHL 617

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            +M   G  P   T N++ R L  +   +G +++V  +   G
Sbjct: 618 DKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILANG 659


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 246/514 (47%), Gaps = 55/514 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            + I++    +  +VD    L+++M    I  +E  F  +I+ + +    ++AL++F ++
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            + G      +Y+ ++  +    + +M   +YS MK  G  P+                 
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTY------------- 187

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                               N +++ L  N  +D A  LL  M      ++ G E     
Sbjct: 188 --------------------NILLKALCKNNRVDGACKLLVEM------SNKGCE----- 216

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  S+  +I+++ K GK++ A    RE++ I    NV +YN LI+G C   +++
Sbjct: 217 -----PDVVSYTTVISSMSKLGKVEEA----RELS-IRFQPNVSVYNALINGFCREYKVK 266

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E + LL +M E G  P   T +++   L    +V  AL +  KM V+G  P V   T L+
Sbjct: 267 EVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLM 326

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           K     G+ +EA      M +EGF P++V Y+  I GL    ++  A+ +   +  +GC 
Sbjct: 327 KGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS 386

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+V  Y  +I G  KA  +  A +++N+M+T G IP+V  Y  ++N  C+S    QA   
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           + +M   ++  P+ +T+ T I GLC +GR + AI L+ +ME+ GC+PN  T+  ++ GL 
Sbjct: 447 IEKM-STDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLL 505

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           K +R + AL     M+EKGM+ ++  +  +   F
Sbjct: 506 KENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 255/581 (43%), Gaps = 56/581 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I     VGL E+A  +F +++  G C P    YN LL+A+       ++E     M+  
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFG-CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRD 178

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + YT   LL+  C + + D A  +  E+ + G   + V ++ ++ + SK G+V++A
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  R        N   +  LI+GF ++ +V +   L  +M + G   +   Y  +I  
Sbjct: 239 RELSIRFQP-----NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L     +E+AL ++++M   G +P+                             V T T 
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPN-----------------------------VYTFT- 323

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              S+M+     G + +A N+   M      A+ G E          PN  +++ +I+ L
Sbjct: 324 ---SLMKGYFMRGRVLEALNIWNRM------AEEGFE----------PNVVAYNTLIHGL 364

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              GK+  A+S+  +M + GC  NV  Y  LIDG   +  L  + E+  +M  +G  P  
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
               SM   LCR      A +L+ KM      P        IK LC  G+   A      
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M Q G  P+I  Y+  + GL+   R+  ALEL  ++   G   ++V YN I  G C   +
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  L  +M+  G+ P   TYN L   +C  G +  A+  L ++       P+V  YT
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYT 604

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           +L+ G+C     ++A++  ++M  +G   N  T+ AL+ GL
Sbjct: 605 SLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 181/405 (44%), Gaps = 66/405 (16%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F  +INT  + G  + AL +F  + + GC   V +YN+L+D + + NR +    +   M+
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK 176

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G +P  +T N + + LC+   V GA  L+ +M  +G EP V   T +I  + K GK  
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE 236

Query: 447 EA------------------------------FRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           EA                              F  L  MV++G  P+++ YS  I  L  
Sbjct: 237 EARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSG 296

Query: 477 IKRVDLALELFRDICAHGCCPDV-----------------------------------VA 501
           I  V+LAL ++  +   GC P+V                                   VA
Sbjct: 297 IGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVA 356

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I GLC   ++ EA  + ++M   G  P+V+TY  LI+G+ K+G++  A    ++M+
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P+V+ YT++++ LC +     A  L  +M    C PN +TF   I GLC   R 
Sbjct: 417 -TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A+  F  M++ G  P++  +  ++   L E     A E++ EM
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 224/496 (45%), Gaps = 90/496 (18%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           ++  +KR+G   PN Y+YN LL+ALCK+  VD     L EM + G   D  + T ++   
Sbjct: 171 IYSNMKRDGK-EPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSM 229

Query: 112 CNSGQFDKA----------LSVFNEIIDHGWVDEH----------------------VFS 139
              G+ ++A          +SV+N +I+ G+  E+                       +S
Sbjct: 230 SKLGKVEEARELSIRFQPNVSVYNALIN-GFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            ++ + S  G V+ A  +  +M       N  TF  L+ G+  + RV +AL ++++M + 
Sbjct: 289 TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE 348

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           GF  +   Y+ +I GLC + ++  A+ + S+M+ +G +P+      LI   +  G+L + 
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL-VG 407

Query: 260 VKEIWEDRDVN---TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             EIW     N      ++  S++ +L  +    QA++L++ M                 
Sbjct: 408 ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKM----------------S 451

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                PNT +F+  I  L   G+++ A++LF +M Q GC  N+  YN ++DGL   NR++
Sbjct: 452 TDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIK 511

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTL- 434
           E+ EL+ EMEE G +    T N++F   C       AL L+ KM V G +P  + +NTL 
Sbjct: 512 EALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLT 571

Query: 435 --------------LIKELCKHGKAM--------------------EAFRFLTDMVQEGF 460
                         L+ +L   GK +                    EA  +L  M+ EG 
Sbjct: 572 YAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGI 631

Query: 461 LPDIVCYSAAIGGLID 476
             +   ++A + GL +
Sbjct: 632 CLNAATWNALVRGLFN 647



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 180/419 (42%), Gaps = 58/419 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+E  +L  Q+  +G+  PN  +Y+ ++ +L    +V+L      +M   G   + YT T
Sbjct: 265 VKEVFLLLGQMVEKGI-DPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFT 323

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L++ Y   G+  +AL+++N + + G+    V ++ L+      G++ +A  +  +M+  
Sbjct: 324 SLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERN 383

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY---------------- 208
               N  T+  LI GF K   +  A ++++KM  +G   +  +Y                
Sbjct: 384 GCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQA 443

Query: 209 -------------------DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
                              +  I GLC + ++E A+ L+ +M+  G +P+ +  ++++  
Sbjct: 444 WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503

Query: 250 CSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
              E    E   LV E+ E++ +    +  N+I     + G  ++A  LL  M+ G    
Sbjct: 504 LLKENRIKEALELVTEM-EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVG---- 558

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNL 365
                        V P+  +++ +       GK+  A+ L  +++  G  +  V  Y +L
Sbjct: 559 ------------GVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSL 606

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           + G+CN   +EE+   L +M   G      T N++ R L      +G ++++  +   G
Sbjct: 607 LWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 255/573 (44%), Gaps = 59/573 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A+ LF ++   GL  PN  +Y  L+ ALCK   ++       +M+D G     Y    
Sbjct: 355 DDADRLFKEMAGRGL-EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC  G  D+A  + + ++  G       +S L+    + G++    EL   M +  
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI+GF K  ++D+A +LFDKM  S    +   ++V+I G C    +  A 
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           QLY +M   G+ PD      LI+                          LC       ++
Sbjct: 534 QLYDQMVEMGLKPDNYTYRSLISG-------------------------LC-------LT 561

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +G + +A          E +AD+     ++       N  S   ++    ++G+      
Sbjct: 562 SG-VSKA---------NEFVADLENSYAVL-------NNFSLTALLYGFFREGRFTETYH 604

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+ EM   G   ++  +  ++      +  E+S  L REM+E G KP       M   L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + ++++ ALN   +M V G+ P    +T+LI  LCK G    A     +M+    LP+  
Sbjct: 665 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICA---HGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            Y+      +D    +  +E  +D+ +    G    +V++NI+I GLCKA ++ EA DL 
Sbjct: 725 TYNC----FLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +++   G  P   +Y+ +I+  CK G+I++A    + ML K    PDV+ Y   I    +
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPDVVAYNIFIRWCNV 839

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            G  D A+ ++  M   G  PN  T+ AL++G+
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 242/558 (43%), Gaps = 85/558 (15%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+++  S +L +  K  +   A +L ++M    + L+E  +   I  + +   +D A  L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M   G  + A  Y+V++ GLCKN +++ A+++ + M   G+T D      L+     
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             EL + ++ I  D                                              
Sbjct: 281 MEELEMALR-ITHD---------------------------------------------- 293

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            MI  G V P+ ++   +I+ L K   ++ A SL  ++  +G + NVF YN LID LC +
Sbjct: 294 -MIRLGFV-PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R +++  L +EM   G +P   T   +   LC+R  +  AL L  KMR +G +  V   
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI   CK G    A   L+ MV+EG  P    YS  I GL     +   +EL R++  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   +   +  +I+G CK +++ EA  LF++MI   +IP+  T+N++I G+C  GNI +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIA----------------------------- 583
           A     +M+E     PD  TY +LI GLC+                              
Sbjct: 532 AFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590

Query: 584 ------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 GR  +   LW+EM  +G   + ++F  ++    K      + V FR MKE+G+K
Sbjct: 591 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650

Query: 638 PDMFVFVALISAFLSELN 655
           PD   +  +I A   E N
Sbjct: 651 PDDIFYTCMIDALSKEEN 668



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 173/687 (25%), Positives = 308/687 (44%), Gaps = 69/687 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL--- 61
           L + R+ A  R L   +++S   +        IR       ++ A  L  +++ EG+   
Sbjct: 173 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 232

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            VP    YN L+  LCK+  V + VE++   M + G   D+ T   L+  +C   + + A
Sbjct: 233 AVP----YNVLMYGLCKNMRVQEAVEVK-NVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287

Query: 121 LSVFNEIIDHGWVDEHVFSILLV-----------AFS---KWGE-------------VDK 153
           L + +++I  G+V        ++           AFS   K G+             +DK
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347

Query: 154 ACELIERMDDCN----------IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            C+  ER DD +          +  NE T+ +LIH   K+  ++ AL LFDKM   G   
Sbjct: 348 LCK-NERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LV 260
               Y+ +I G CK   L+ A  L S M   G+TP     S LI      G+L+    L 
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           +E+ E R +        +++     +  +D+A  L   MI    I               
Sbjct: 467 REMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--------------- 510

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F+++I      G +  A  L+ +M ++G   + + Y +LI GLC ++ + ++ E
Sbjct: 511 -PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            + ++E S     +F+L ++     R        +L  +M V+G +  +   T+++    
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K     ++     +M ++G  PD + Y+  I  L   + +  AL  +  +   G  P+ V
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            + ++I+ LCK+  +  AE L  EM+   ++P+  TYN  ++ +   G++++A    S M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           L+    S  ++++  LI GLC AG+  +AI L +++ E G +P+ I++  +I  LCK   
Sbjct: 750 LQGHLAS--IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 807

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALI 647
              A   +  M  KG+KPD+  +   I
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 267/601 (44%), Gaps = 65/601 (10%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   ++YT + +L       QF  A  +F++++  G  +DE+V++  + A+ +   +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM+   ++ +   + VL++G  K  RV +A+++ + M   G  +D   Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRD 268
            C+ ++LEMAL++  +M   G  P     S +I    DE     LV+E +       D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMI----DELRKKELVEEAFSLACKLGDLG 333

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +       N+++  L  N   D A  L + M      A  G+E          PN  ++ 
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEM------AGRGLE----------PNEVTYA 377

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K G ++ AL LF +M   G    V+ YN+LI+G C    L+ +  LL  M + 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAME 447
           G  PT  + + +   LCR  D+   + L R+M  +G   W  +  T LI   CK  K  E
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG-IAWNNYTFTALINGFCKDKKMDE 496

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    M+    +P+ V ++  I G   +  +  A +L+  +   G  PD   Y  +IS
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLC-----------------------------------KAQRVAEAEDLFNEMITKGLIP 532
           GLC                                   +  R  E   L++EM  +G+  
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +++    K  + +++ + L R ++++   PD I YT +ID L        A+  
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCV-LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W++M   G +PN +T   LI  LCK     +A +  + M    + P+ F +   +  F +
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 653 E 653
           E
Sbjct: 736 E 736


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 153/584 (26%), Positives = 271/584 (46%), Gaps = 24/584 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGW--GYDKYTLTPLLQVYCNSGQFDK 119
           CVP+ +SY+ LL++LC        +  L+ M + G     D      ++  +   G  +K
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNK 237

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A  +F E++  G   + V +S ++ A  K   +DKA   + +M +  +  N  T+  LI+
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+    +  +A+++F +M +     D   +++++G LCK  +++ A  ++  M   G  P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 239 DFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D    + ++   + +G   ++T L   +  D  +  +    N +++   + G +D+A   
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGD-GIAPVICTFNVLIKAYANCGMLDKA--- 413

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              MI    + D GV+          PN  ++  +I  L + GK+D A+  F +M   G 
Sbjct: 414 ---MIIFNEMRDHGVK----------PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             + + Y+ LI G C    L ++ EL+ E+  +G        +S+   LC+   V+ A N
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +       G  P     ++L+   C  GK  +A R    MV  G  P+ V Y   + G  
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I R+D  L LFR++   G  P  + YNIII GL +A R   A+  F+EM   G+  +  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY++++ G  K+   D+A+  L + L   +   D+IT  T+I G+    R ++A  L+  
Sbjct: 641 TYSIVLRGLFKNRCFDEAIF-LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   G  P  +T+  +IT L K      A   F  M+  G +PD
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 270/595 (45%), Gaps = 25/595 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P +++Y  L++   ++   +L      ++   G   D      LL+ +C + + D+AL +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 124 -FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHG 179
             +   + G V D   +SILL +    G+  +A +L+  M +     +     +  +I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K+  V+KA  LF +M + G   D   Y  ++  LCK + ++ A     +M   G+ P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQ 297
               + LI   S  G+    V+   E R  + +   +  N +M  L   G I +A ++  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 298 AM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            M +KG+                 +P+  S++I++N     G L     LF  M   G  
Sbjct: 349 TMAMKGQ-----------------NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +  +N LI    N   L+++  +  EM + G KP   T  ++   LCR   +  A+  
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  QG  P       LI+  C HG  ++A   +++++  G   DIV +S+ I  L  
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           + RV  A  +F      G  P  V Y++++ G C   ++ +A  +F+ M++ G+ P+   
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L+NG+CK G ID+ +     ML+K    P  I Y  +IDGL  AGR   A + ++EM
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQK-GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            E G A N+ T+  ++ GL K      A+  F+ ++   +K D+     +I+   
Sbjct: 631 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 258/574 (44%), Gaps = 58/574 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V +A  LF ++ + G+  P+  +Y+ ++ ALCK+ ++D  E  L++M + G   + +T
Sbjct: 233 GDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  Y ++GQ+ +A+ VF E+     + + V F++L+ +  K+G++ +A ++ + M 
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMA 351

Query: 163 ---------DCNIRLNEK--------------------------TFCVLIHGFVKKSRVD 187
                      NI LN                            TF VLI  +     +D
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLD 411

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           KA+ +F++M   G   +   Y  +I  LC+  +++ A++ +++M   G+ PD      LI
Sbjct: 412 KAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                 G L L  KE+  +   N M L   L +SI+  L   G +  A N+    +    
Sbjct: 472 QGFCTHGSL-LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV---- 526

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
             +VG+           P    + ++++     GK++ AL +F  M   G   N  +Y  
Sbjct: 527 --NVGLH----------PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++G C   R++E   L REM + G KP+    N +   L      V A     +M   G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
                   +++++ L K+    EA     ++       DI+  +  I G+   +RV+ A 
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +LF  I   G  P VV Y+I+I+ L K   V EAED+F+ M   G  P     N ++   
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            K   I +A   LS++ E+ + S + +T   L+D
Sbjct: 755 LKKNEIVRAGAYLSKIDER-NFSLEHLTTMLLVD 787



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 9/364 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIII-NTLLKD----GKLDLALSLFREMT-QIGCMQNVFLYNN 364
           E+ + F G +       DIII N LLK      + D AL +    T ++GC+ +VF Y+ 
Sbjct: 128 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 187

Query: 365 LIDGLCNSNRLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           L+  LC+  +  ++ +LLR M E G    P     N++     +  DV  A +L ++M  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P     + ++  LCK     +A  FL  MV +G LP+   Y+  I G     +   
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ +F+++      PDVV +N+++  LCK  ++ EA D+F+ M  KG  P V +YN+++N
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+   G +   M  L  ++  +  +P + T+  LI      G  D A++++NEM + G  
Sbjct: 368 GYATKGCLVD-MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN +T+  +I  LC+  +   A+  F  M ++G+ PD + +  LI  F +  +   A E+
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 663 LKEM 666
           + E+
Sbjct: 487 ISEI 490



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 242/558 (43%), Gaps = 26/558 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREG-LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           L++ L   G   +A+ L   +   G +C P+  +YN +++   K   V+      KEM  
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDK 153
            G   D  T + ++   C +   DKA +   ++++ G +  +  ++ L+  +S  G+  +
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  + + M   +I  +  TF +L+    K  ++ +A  +FD M   G   D   Y++++ 
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 214 GLCKNKQLEMALQLYSEMKGSGITP---DFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           G      L     L+  M G GI P    F +L K   +C    +  ++  E+  D  V 
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVK 426

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI--------------F 316
              L   +++  L   G +D A      MI      D      +I               
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486

Query: 317 KGTVSPNTSSFDI-----IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
              +  N    DI     IIN L K G++  A ++F     +G      +Y+ L+DG C 
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             ++E++  +   M  +G +P      ++    C+   +   L+L R+M  +G +P    
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++I  L + G+ + A     +M + G   +   YS  + GL   +  D A+ LF+++ 
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A     D++  N +I+G+ + +RV EA+DLF  +   GL+P V TY+++I    K G ++
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726

Query: 552 QAMLCLSRMLEKESGSPD 569
           +A    S M +     PD
Sbjct: 727 EAEDMFSSM-QNAGCEPD 743



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 2/190 (1%)

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED-LFNEMITKGLIPSVATY 537
           R +LAL  F  +   G   D++  N ++ G C+A+R  EA D L +     G +P V +Y
Sbjct: 126 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           ++L+   C  G   QA   L  M E  +  SPDV+ Y T+IDG    G  + A  L+ EM
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 245

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
            ++G  P+ +T+ +++  LCK      A    R M  KG+ P+ + +  LI  + S    
Sbjct: 246 VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW 305

Query: 657 PLAFEVLKEM 666
             A  V KEM
Sbjct: 306 KEAVRVFKEM 315



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 7/176 (3%)

Query: 482 LALELFRDICAHGCCPDVVA-----YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           LA+ LF    +    P V++     Y I++    +A R   A   F +++  GL   +  
Sbjct: 89  LAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIII 148

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N L+ G+C++   D+A+  L     +    PDV +Y+ L+  LC  G+   A  L   M
Sbjct: 149 ANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 208

Query: 597 EEKG--CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            E G  C+P+ + +  +I G  K      A   F+ M ++G+ PD   + +++ A 
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHAL 264


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 231/496 (46%), Gaps = 67/496 (13%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  L+H + +      A +L  KM   G+     +Y+++IGG+C  + L           
Sbjct: 14  FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDL----------- 62

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
                P  E++     + ++  E+ +++ ++           +CN   R L   G  ++A
Sbjct: 63  -----PSMEVIGLAERAYNEMLEMGVVLNKVN----------VCN-FTRCLCCIGKFEKA 106

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           YN+++ M+                KG + P++S++  +I  L    K++ A  LF+EM +
Sbjct: 107 YNVIREMMS---------------KGFI-PDSSTYSKVIGYLCNASKVEKAFQLFQEMKR 150

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +V+ Y  L+D  C    +E++     EM++ G  P   T  ++     + + +  
Sbjct: 151 NGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSR 210

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA--------------------FRFL 452
           A  +   M   G  P +   T LI   CK G+  +A                    FR +
Sbjct: 211 ANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIV 270

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
              ++E   P++V Y A + GL    +V  A +L   +   GC P+ + Y+ +I G CK 
Sbjct: 271 DSELKE---PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKV 327

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            ++ EA+++F +M+  G  P+V TY+ LI+   K   +D A+  L++MLE  S +P+V+ 
Sbjct: 328 GKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN-SCAPNVVI 386

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           YT ++DGLC  G+ D+A  L   MEEKGC PN +T+ A+I G  K  R    L   ++M 
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMT 446

Query: 633 EKGMKPDMFVFVALIS 648
            KG  P+   +  LI+
Sbjct: 447 SKGCAPNFITYRVLIN 462



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 164/641 (25%), Positives = 274/641 (42%), Gaps = 50/641 (7%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           ++   C+ SP     L+      G    A  L  ++   G   P    YN L+  +C + 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGY-QPGYVVYNILIGGICSTE 60

Query: 81  S------VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV- 133
                  + L E    EM + G   +K  +    +  C  G+F+KA +V  E++  G++ 
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   +S ++       +V+KA +L + M    I  +  T+  L+  F K   +++A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           D+M + G A +   Y  +I    K ++L  A +++  M  +G  P+    + LI      
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           GE                    C    R+   N  +D              I DV +   
Sbjct: 241 GE----------------TEKACQIYARM--KNDKVD--------------IPDVDIYFR 268

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           ++      PN  ++  +++ L K  K+  A  L   M+  GC  N  +Y+ LIDG C   
Sbjct: 269 IVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVG 328

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +L+E+ E+  +M   G  P  +T +S+   L + + +  AL ++ KM      P V   T
Sbjct: 329 KLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYT 388

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            ++  LCK GK  EA+R +  M ++G  P++V Y+A I G     RVD  LEL + + + 
Sbjct: 389 EMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSK 448

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC P+ + Y ++I+  C A  + +A  L  EM        +  Y  +I G+        A
Sbjct: 449 GCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF---VA 505

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            L L   L ++   P +  Y  LID    AGR + A+ L  E+     A    T+++LI 
Sbjct: 506 SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIE 564

Query: 614 GL---CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            L   CK D+   A   +  M  +G  P++ + V LI   L
Sbjct: 565 SLTLACKVDK---AFKLYSDMTRRGFVPELSMLVCLIKGLL 602



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 179/379 (47%), Gaps = 29/379 (7%)

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
           +MI +G   P+   F+ +++   + G    A  L ++M   G      +YN LI G+C++
Sbjct: 1   MMITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICST 59

Query: 373 NRL---------EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
             L         E +Y    EM E G       + +  RCLC       A N++R+M  +
Sbjct: 60  EDLPSMEVIGLAERAY---NEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSK 116

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P     + +I  LC   K  +AF+   +M + G  PD+  Y+  +     +  ++ A
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
              F ++   GC P+VV Y  +I    K ++++ A ++F  M++ G +P++ TY  LI+G
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236

Query: 544 WCKSGNIDQAMLCLSRM----------------LEKESGSPDVITYTTLIDGLCIAGRPD 587
            CK+G  ++A    +RM                ++ E   P+V+TY  L+DGLC A +  
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  L   M  +GC PN+I + ALI G CK  +   A   F  M   G  P+++ + +LI
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356

Query: 648 SAFLSELNPPLAFEVLKEM 666
                +    LA +VL +M
Sbjct: 357 DKLFKDKRLDLALKVLTKM 375



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 223/502 (44%), Gaps = 77/502 (15%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A  LF ++KR G+  P+ Y+Y  LL+  CK   ++       EMQ  G   +  T T
Sbjct: 138 VEKAFQLFQEMKRNGI-TPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYT 196

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  Y  + +  +A  +F  ++ +G V   V ++ L+    K GE +KAC++  RM + 
Sbjct: 197 ALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKND 256

Query: 165 NIRL-----------------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            + +                 N  T+  L+ G  K  +V +A  L + M+  G   +  +
Sbjct: 257 KVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQII 316

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
           YD +I G CK  +L+ A +++++M G G +P+    S LI     +  L L +K + +  
Sbjct: 317 YDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKML 376

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           +       ++   ++  L   G  D+AY L                MLM+ +    PN  
Sbjct: 377 ENSCAPNVVIYTEMVDGLCKVGKTDEAYRL----------------MLMMEEKGCYPNVV 420

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I+   K G++D  L L + MT  GC  N   Y  LI+  C +  L+++++LL EM
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480

Query: 386 EESGFKPTHFTLNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +++ + P H     M+R +      + V +L L+ ++   G  P +    LLI    K G
Sbjct: 481 KQT-YWPKHI---GMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG 536

Query: 444 K---AME-------------------------------AFRFLTDMVQEGFLPDIVCYSA 469
           +   A+E                               AF+  +DM + GF+P++     
Sbjct: 537 RLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVC 596

Query: 470 AIGGLIDIKRVDLALELFRDIC 491
            I GL+ + + + AL+L   IC
Sbjct: 597 LIKGLLRVGKWEEALQLSDSIC 618



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 5/203 (2%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C+ +      +I   G  G V+    L   +  +G C PN  +Y  L+   C +  +D  
Sbjct: 415 CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG-CAPNFITYRVLINHCCAAGLLDDA 473

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVA 144
              L+EM+   W         +++ +  S +F  +L +  E+ + G V    V+ +L+  
Sbjct: 474 HKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDN 531

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F K G ++ A EL E +   +    + T+  LI       +VDKA +L+  MT+ GF  +
Sbjct: 532 FIKAGRLEMALELHEELSSFSAAY-QNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPE 590

Query: 205 AAMYDVIIGGLCKNKQLEMALQL 227
            +M   +I GL +  + E ALQL
Sbjct: 591 LSMLVCLIKGLLRVGKWEEALQL 613


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 297/655 (45%), Gaps = 75/655 (11%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           Q++  S   +S  A   LI      G+ E+A   F  + R+  C P+ +++N +L  L +
Sbjct: 117 QELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESF-SLMRDFDCKPDLFAFNLILHFLVR 175

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
             +  L      +M       D  T   L+   C + +   AL +F+E+ D G + ++ +
Sbjct: 176 KEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQII 235

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +SI+L    +  ++  A  L  +M       +  T+ VL++GF K   +D A  L   +T
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G       Y  +I GL + ++ E A   Y +M    I PD  + + +I   S EG +T
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 258 LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             +  + E  +R +   T+  N++++     G +D+A +L                 L I
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL----------------RLEI 399

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            K    PN  ++ I+I  + K+G ++ A  +F+EM ++GC+ +V  +N+LI+GLC +NRL
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EE+  L  +ME    KP      S+F  L +  D V  +  ++ M               
Sbjct: 460 EEARLLFYQMEIVR-KP------SLFLRLSQGTDKVFDIASLQVM--------------- 497

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           ++ LC+ G  ++A++ L  +V  G LPDI  Y+  I G      ++ A +LF+++   G 
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH 557

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
            PD V Y  +I GL +A R  +A ++F +M+ KG +P  +TY  ++   C+  NI  A+ 
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617

Query: 555 ------------------------------LCLSRMLEKE--SGSPDVITYTTLIDGLCI 582
                                           + R+LE +  S + D+  YT  + GL  
Sbjct: 618 VWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ 677

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           A R  +A  +++ +++     +  + + LI  LC  +    A+  F    E+G +
Sbjct: 678 AKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFR 732



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 230/511 (45%), Gaps = 33/511 (6%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
             +LF    KS       + D+IIG L K    E+  ++  E+K S I    E  S LI 
Sbjct: 77  GFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIE 136

Query: 249 SCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S+ G  E  +    +  D D        N I+  LV   +   A  +   M+K     
Sbjct: 137 AYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 307 DV---GV------------EMLMIFKGT----VSPNTSSFDIIINTLLKDGKLDLALSLF 347
           DV   G+            + L++F       + PN   + I+++ L +  K+  A  LF
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLF 256

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   GC +++  YN L++G C S  L++++ LL+ + + G          +   L R 
Sbjct: 257 SKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRA 316

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +    A    +KM  +  +P V   T++I+ L + G+  EA   L +M + G  PD +CY
Sbjct: 317 RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICY 376

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I G  D+  +D A  L  +I  H C P+   Y+I+I G+CK   + +A+ +F EM  
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM---------LEKESGSP---DVITYTT 575
            G +PSV T+N LING CK+  +++A L   +M         L    G+    D+ +   
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +++ LC +G    A  L  ++ + G  P+  T+  LI G CK      A   F+ M+ KG
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             PD   +  LI           A E+ ++M
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 148/637 (23%), Positives = 259/637 (40%), Gaps = 89/637 (13%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
            R+ A L  LA      +C ++P  +  G LI  L      ++A +LFD++   G+ +PN
Sbjct: 174 VRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI-LPN 232

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
              Y+ +L  LC++  +   +    +M+  G   D  T   LL  +C SG  D A ++  
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 126 EIIDHGWV------------------------------------DEHVFSILLVAFSKWG 149
            +   G +                                    D  +++I++   S+ G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            V +A  L+  M +  +R +   +  LI GF     +D+A  L  +++K     +   Y 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           ++I G+CKN  +  A  ++ EM+  G  P     + LI        L       ++   V
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV-----EMLM-IFKGTVSPN 323
              +L       + +S G+ D+ +++    +  E + + G+     ++LM +    V P+
Sbjct: 473 RKPSLF------LRLSQGT-DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++I+IN   K G ++ A  LF+EM   G M +   Y  LIDGL  + R E++ E+  
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M + G  P   T  ++    CR  ++  AL++  K  ++    W      ++ E   + 
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKY-LRDFRGWEDEKVRVVAESFDNE 644

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A R L +M                    DIK  +                D+  Y 
Sbjct: 645 ELQTAIRRLLEM--------------------DIKSKNF---------------DLAPYT 669

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I + GL +A+R  EA  +F+ +    +  S A+  +LI   C   N+D AM      LE+
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLER 729

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                  I    L+  L    R DDA+ L N ME  G
Sbjct: 730 GFRLMPPIC-NQLLCNLLHLDRKDDALFLANRMEASG 765


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 251/570 (44%), Gaps = 55/570 (9%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D  VF+ LL+++ +  ++ +A E    M +  +        VL+   ++++ V+ A +LF
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 194 DKMTK-----------------------------------SGFASDAAMYDVIIGGLCKN 218
           D+M +                                    G   DAA Y ++I  +C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLC 276
             L++A +L    +  G  P     + +I +C   G     L +K+   D  V     + 
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            S+++     G ++ A  L       + + +VG          V+PN + F ++I    K
Sbjct: 331 TSLIKGYCVRGDVNSALRLF------DEVVEVG----------VTPNVAIFSVLIEWCSK 374

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G ++ A  L+  M  +G    VF+ N L+ G    N LE +Y LL    E+G      T
Sbjct: 375 IGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASV-VT 433

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +   LC    V  A NL  KM  +G  P +     +I   CK G   +A   +  ++
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P+ + Y+  + G       + A  +F  + A G  P    +N II+GLCK  RV+
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA D  N  I +  IP+  TYN +I+G+ K G ID A      M   E  SP+VITYT+L
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEI-SPNVITYTSL 612

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I+G C + + D A+ + ++M+ KG   +   +  LI G CK      A   F  + E G+
Sbjct: 613 INGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            P+  V+  +ISA+ +  N   A  + KEM
Sbjct: 673 TPNTIVYNIMISAYRNLNNMEAALNLHKEM 702



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 163/632 (25%), Positives = 276/632 (43%), Gaps = 70/632 (11%)

Query: 45  LVEEANMLFDQVKRE---GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           +VE+A+ LFD++      G C    Y+   L+ A  K       E    +    G   D 
Sbjct: 202 MVEDAHRLFDEMAERRIYGDC----YTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDA 257

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIER 160
            + + ++Q  C     D A  +     + GWV  E  ++ ++ A  + G   +A  L + 
Sbjct: 258 ASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDE 317

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M D  + +N      LI G+  +  V+ AL+LFD++ + G   + A++ V+I    K   
Sbjct: 318 MVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGN 377

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCN 277
           +E A +LY+ MK  G+ P   IL+ L+     +  L    LL+    E+   + +T   N
Sbjct: 378 VEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTY--N 435

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIA--------------------DVGVEMLMIFK 317
            ++  L   G +++A NL   MI G+ I                     D    M  I +
Sbjct: 436 IVLLWLCELGKVNEACNLWDKMI-GKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIE 494

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
             + PN  ++ I++    K G  + A ++F +M   G +   + +N++I+GLC   R+ E
Sbjct: 495 SGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSE 554

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + + L    +  F PT  T N +     +   +  A ++ R+M      P V   T LI 
Sbjct: 555 ARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLIN 614

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK  K   A +   DM ++G   DI  Y+  I G   ++ ++ A + F  +   G  P
Sbjct: 615 GFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTP 674

Query: 498 DVVAYNIIIS-----------------------------------GLCKAQRVAEAEDLF 522
           + + YNI+IS                                   GL K  +++ A DL+
Sbjct: 675 NTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLY 734

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +EM+ +G++P +  YN+LING C  G ++ A   L  M +  + +P V+ Y TLI G   
Sbjct: 735 SEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEM-DGNNITPTVLLYNTLIAGHFK 793

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            G   +A  L +EM +KG  P+  T+  L+ G
Sbjct: 794 EGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 248/536 (46%), Gaps = 33/536 (6%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++V SR  ++      LI+     G V  A  LFD+V   G+  PN   ++ L+E  
Sbjct: 314 LKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGV-TPNVAIFSVLIEWC 372

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K  +V+        M+  G     + L  LL+ +      + A  + +  +++G     
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVV 432

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++I+L+   + G+V++AC L ++M    I  +  ++  +I G  KK  +D A ++ + +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG   +A  Y +++ G  K    E A  ++ +M  +GI P     + +I      G +
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552

Query: 257 TLLVKEIWEDRD-VNTM--------TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
           +       E RD +NT         ++  N I+   V  G+ID A ++ + M + E    
Sbjct: 553 S-------EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSE---- 601

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                       +SPN  ++  +IN   K  K+DLAL +  +M + G   ++ +Y  LI 
Sbjct: 602 ------------ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIA 649

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C    +E + +   ++ E G  P     N M        ++  ALNL ++M       
Sbjct: 650 GFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPC 709

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            +K  T LI  L K GK   A    ++M+  G +PDI  Y+  I GL +  +++ A ++ 
Sbjct: 710 DLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKIL 769

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           +++  +   P V+ YN +I+G  K   + EA  L +EM+ KGL+P   TY++L+NG
Sbjct: 770 KEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 186/437 (42%), Gaps = 44/437 (10%)

Query: 271 TMTLLCNSIMRILVSNGSID-QAYNLLQAMIKGE--PIADVGVEMLMIFK---GTVSPNT 324
           T  +LC  +++IL SN      A +LL   + G+  P A V VE+L+      G    ++
Sbjct: 94  TADVLC-LLLQILASNPETHGDAKHLLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDS 152

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             F+ ++ + ++  K+  A+  FR M + G +  V   N L+  +   N +E+++ L  E
Sbjct: 153 RVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDE 212

Query: 385 MEESGFKPTHFTLNSMFR-CL----------------------------------CRRQD 409
           M E       +TL  + R CL                                  CR  D
Sbjct: 213 MAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD 272

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  LV      G  P       +I    + G   EA R   +MV      ++   ++
Sbjct: 273 LDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATS 332

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      V+ AL LF ++   G  P+V  ++++I    K   V +A +L+  M   G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P+V   N L+ G+ K   ++ A L L   +  E+G   V+TY  ++  LC  G+ ++A
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENAYLLLDGAV--ENGIASVVTYNIVLLWLCELGKVNEA 450

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             LW++M  KG  P+ +++  +I G CK      A      + E G+KP+   +  L+  
Sbjct: 451 CNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEG 510

Query: 650 FLSELNPPLAFEVLKEM 666
              + +   AF +  +M
Sbjct: 511 SFKKGDCEHAFNMFDQM 527


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 250/573 (43%), Gaps = 59/573 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A+ LF ++   GL  PN  +Y  L+ ALCK   ++       +M+D G     Y    
Sbjct: 355 DDADRLFKEMAGRGL-EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 413

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC  G  D+A  + + ++  G       +S L+    + G++    EL   M +  
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI+GF K  ++D+A +LFDKM  S    +   ++V+I G C    +  A 
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 533

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           QLY +M   G+ PD                                     N   R L+S
Sbjct: 534 QLYDQMVEMGLKPD-------------------------------------NYTYRSLIS 556

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +    +        E +AD+     ++       N  S   ++    ++G+      
Sbjct: 557 GLCLTSGVSKAN-----EFVADLENSYAVL-------NNFSLTALLYGFFREGRFTETYH 604

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+ EM   G   ++  +  ++      +  E+S  L REM+E G KP       M   L 
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + ++++ ALN   +M V G+ P    +T+LI  LCK G    A     +M+    LP+  
Sbjct: 665 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICA---HGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            Y+      +D    +  +E  +D+ +    G    +V++NI+I GLCKA ++ EA DL 
Sbjct: 725 TYNC----FLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +++   G  P   +Y+ +I+  CK G+I++A    + ML K    PDV+ Y   I    +
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPDVVAYNIFIRWCNV 839

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            G  D A+ ++  M   G  PN  T+ AL++G+
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 242/558 (43%), Gaps = 85/558 (15%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+++  S +L +  K  +   A +L ++M    + L+E  +   I  + +   +D A  L
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M   G  + A  Y+V++ GLCKN +++ A+++ + M   G+T D      L+     
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             EL + ++ I  D                                              
Sbjct: 281 MEELEMALR-ITHD---------------------------------------------- 293

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            MI  G V P+ ++   +I+ L K   ++ A SL  ++  +G + NVF YN LID LC +
Sbjct: 294 -MIRLGFV-PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 351

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R +++  L +EM   G +P   T   +   LC+R  +  AL L  KMR +G +  V   
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI   CK G    A   L+ MV+EG  P    YS  I GL     +   +EL R++  
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   +   +  +I+G CK +++ EA  LF++MI   +IP+  T+N++I G+C  GNI +
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIA----------------------------- 583
           A     +M+E     PD  TY +LI GLC+                              
Sbjct: 532 AFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 590

Query: 584 ------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 GR  +   LW+EM  +G   + ++F  ++    K      + V FR MKE+G+K
Sbjct: 591 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 650

Query: 638 PDMFVFVALISAFLSELN 655
           PD   +  +I A   E N
Sbjct: 651 PDDIFYTCMIDALSKEEN 668



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 157/632 (24%), Positives = 279/632 (44%), Gaps = 88/632 (13%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           +  D+++     S     F+I  L    LVEEA  L  ++   G+ VPN ++YN L++ L
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM-VPNVFAYNALIDKL 348

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
           CK+                                    +FD A  +F E+   G   +E
Sbjct: 349 CKN-----------------------------------ERFDDADRLFKEMAGRGLEPNE 373

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             ++IL+ A  K G ++ A  L ++M D  I++    +  LI+G+ K+  +D+A  L   
Sbjct: 374 VTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M K G    AA Y  +I GLC+N  L   ++L+ EM   GI                   
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA------------------ 475

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                   W +    T T L N   +    +  +D+A  L   MI    I          
Sbjct: 476 --------WNNY---TFTALINGFCK----DKKMDEAARLFDKMIDSNVI---------- 510

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 PN  +F+++I      G +  A  L+ +M ++G   + + Y +LI GLC ++ +
Sbjct: 511 ------PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++ E + ++E S     +F+L ++     R        +L  +M V+G +  +   T++
Sbjct: 565 SKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTII 624

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +    K     ++     +M ++G  PD + Y+  I  L   + +  AL  +  +   G 
Sbjct: 625 VYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGY 684

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V + ++I+ LCK+  +  AE L  EM+   ++P+  TYN  ++ +   G++++A  
Sbjct: 685 SPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD 744

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             S ML+    S  ++++  LI GLC AG+  +AI L +++ E G +P+ I++  +I  L
Sbjct: 745 LHSAMLQGHLAS--IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           CK      A   +  M  KG+KPD+  +   I
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 267/601 (44%), Gaps = 65/601 (10%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   ++YT + +L       QF  A  +F++++  G  +DE+V++  + A+ +   +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM+   ++ +   + VL++G  K  RV +A+++ + M   G  +D   Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRD 268
            C+ ++LEMAL++  +M   G  P     S +I    DE     LV+E +       D  
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMI----DELRKKELVEEAFSLACKLGDLG 333

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +       N+++  L  N   D A  L + M      A  G+E          PN  ++ 
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEM------AGRGLE----------PNEVTYA 377

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K G ++ AL LF +M   G    V+ YN+LI+G C    L+ +  LL  M + 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAME 447
           G  PT  + + +   LCR  D+   + L R+M  +G   W  +  T LI   CK  K  E
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA-WNNYTFTALINGFCKDKKMDE 496

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    M+    +P+ V ++  I G   +  +  A +L+  +   G  PD   Y  +IS
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLC-----------------------------------KAQRVAEAEDLFNEMITKGLIP 532
           GLC                                   +  R  E   L++EM  +G+  
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +++    K  + +++ + L R ++++   PD I YT +ID L        A+  
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCV-LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W++M   G +PN +T   LI  LCK     +A +  + M    + P+ F +   +  F +
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 653 E 653
           E
Sbjct: 736 E 736


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 250/573 (43%), Gaps = 59/573 (10%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A+ LF ++   GL  PN  +Y  L+ ALCK   ++       +M+D G     Y    
Sbjct: 378 DDADRLFKEMAGRGL-EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS 436

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC  G  D+A  + + ++  G       +S L+    + G++    EL   M +  
Sbjct: 437 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 496

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI+GF K  ++D+A +LFDKM  S    +   ++V+I G C    +  A 
Sbjct: 497 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAF 556

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           QLY +M   G+ PD                                     N   R L+S
Sbjct: 557 QLYDQMVEMGLKPD-------------------------------------NYTYRSLIS 579

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
              +    +        E +AD+     ++       N  S   ++    ++G+      
Sbjct: 580 GLCLTSGVSK-----ANEFVADLENSYAVL-------NNFSLTALLYGFFREGRFTETYH 627

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+ EM   G   ++  +  ++      +  E+S  L REM+E G KP       M   L 
Sbjct: 628 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 687

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           + ++++ ALN   +M V G+ P    +T+LI  LCK G    A     +M+    LP+  
Sbjct: 688 KEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 747

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICA---HGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            Y+      +D    +  +E  +D+ +    G    +V++NI+I GLCKA ++ EA DL 
Sbjct: 748 TYNC----FLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLM 803

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +++   G  P   +Y+ +I+  CK G+I++A    + ML K    PDV+ Y   I    +
Sbjct: 804 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK-GLKPDVVAYNIFIRWCNV 862

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            G  D A+ ++  M   G  PN  T+ AL++G+
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 242/558 (43%), Gaps = 85/558 (15%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V+++  S +L +  K  +   A +L ++M    + L+E  +   I  + +   +D A  L
Sbjct: 184 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 243

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M   G  + A  Y+V++ GLCKN +++ A+++ + M   G+T D      L+     
Sbjct: 244 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 303

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             EL + ++ I  D                                              
Sbjct: 304 MEELEMALR-ITHD---------------------------------------------- 316

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            MI  G V P+ ++   +I+ L K   ++ A SL  ++  +G + NVF YN LID LC +
Sbjct: 317 -MIRLGFV-PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKN 374

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R +++  L +EM   G +P   T   +   LC+R  +  AL L  KMR +G +  V   
Sbjct: 375 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 434

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI   CK G    A   L+ MV+EG  P    YS  I GL     +   +EL R++  
Sbjct: 435 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 494

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   +   +  +I+G CK +++ EA  LF++MI   +IP+  T+N++I G+C  GNI +
Sbjct: 495 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 554

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIA----------------------------- 583
           A     +M+E     PD  TY +LI GLC+                              
Sbjct: 555 AFQLYDQMVEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL 613

Query: 584 ------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 GR  +   LW+EM  +G   + ++F  ++    K      + V FR MKE+G+K
Sbjct: 614 YGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVK 673

Query: 638 PDMFVFVALISAFLSELN 655
           PD   +  +I A   E N
Sbjct: 674 PDDIFYTCMIDALSKEEN 691



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 173/687 (25%), Positives = 308/687 (44%), Gaps = 69/687 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL--- 61
           L + R+ A  R L   +++S   +        IR       ++ A  L  +++ EG+   
Sbjct: 196 LVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKAS 255

Query: 62  CVPNNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            VP    YN L+  LCK+  V + VE++   M + G   D+ T   L+  +C   + + A
Sbjct: 256 AVP----YNVLMYGLCKNMRVQEAVEVK-NVMVNIGVTADEVTYRTLVYGFCRMEELEMA 310

Query: 121 LSVFNEIIDHGWVDEHVFSILLV-----------AFS---KWGE-------------VDK 153
           L + +++I  G+V        ++           AFS   K G+             +DK
Sbjct: 311 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 370

Query: 154 ACELIERMDDCN----------IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            C+  ER DD +          +  NE T+ +LIH   K+  ++ AL LFDKM   G   
Sbjct: 371 LCK-NERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 429

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LV 260
               Y+ +I G CK   L+ A  L S M   G+TP     S LI      G+L+    L 
Sbjct: 430 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 489

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           +E+ E R +        +++     +  +D+A  L   MI    I               
Sbjct: 490 REMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--------------- 533

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F+++I      G +  A  L+ +M ++G   + + Y +LI GLC ++ + ++ E
Sbjct: 534 -PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
            + ++E S     +F+L ++     R        +L  +M V+G +  +   T+++    
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K     ++     +M ++G  PD + Y+  I  L   + +  AL  +  +   G  P+ V
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            + ++I+ LCK+  +  AE L  EM+   ++P+  TYN  ++ +   G++++A    S M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           L+    S  ++++  LI GLC AG+  +AI L +++ E G +P+ I++  +I  LCK   
Sbjct: 773 LQGHLAS--IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 830

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALI 647
              A   +  M  KG+KPD+  +   I
Sbjct: 831 INKAFELWNEMLYKGLKPDVVAYNIFI 857



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 267/601 (44%), Gaps = 65/601 (10%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   ++YT + +L       QF  A  +F++++  G  +DE+V++  + A+ +   +D A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM+   ++ +   + VL++G  K  RV +A+++ + M   G  +D   Y  ++ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRD 268
            C+ ++LEMAL++  +M   G  P     S +I    DE     LV+E +       D  
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMI----DELRKKELVEEAFSLACKLGDLG 356

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +       N+++  L  N   D A  L + M      A  G+E          PN  ++ 
Sbjct: 357 MVPNVFAYNALIDKLCKNERFDDADRLFKEM------AGRGLE----------PNEVTYA 400

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K G ++ AL LF +M   G    V+ YN+LI+G C    L+ +  LL  M + 
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAME 447
           G  PT  + + +   LCR  D+   + L R+M  +G   W  +  T LI   CK  K  E
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG-IAWNNYTFTALINGFCKDKKMDE 519

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    M+    +P+ V ++  I G   +  +  A +L+  +   G  PD   Y  +IS
Sbjct: 520 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 579

Query: 508 GLC-----------------------------------KAQRVAEAEDLFNEMITKGLIP 532
           GLC                                   +  R  E   L++EM  +G+  
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            + ++ +++    K  + +++ + L R ++++   PD I YT +ID L        A+  
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCV-LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 698

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W++M   G +PN +T   LI  LCK     +A +  + M    + P+ F +   +  F +
Sbjct: 699 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 758

Query: 653 E 653
           E
Sbjct: 759 E 759


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 171/338 (50%), Gaps = 5/338 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESY 379
            P+  S+  +IN L K G++D A  LFR+M   G C  N F YN L+DGLC  +RL+ + 
Sbjct: 43  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            ++ E  +  F P   T N++   L +   V  AL    +M  +G+ P +     +I  L
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+  +  +A     +M+   F P++V YS  I GL    ++D A +L   + + GC PD+
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 222

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           VAY  ++ G   A R+  A  L   M+++G IP V TY ++I+  CK G +D A   + R
Sbjct: 223 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHE-IFR 281

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            L     SP+V+TY+ LI G C A R D+   +  EM    C PN +T+  +I GL   D
Sbjct: 282 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVD 338

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           R   A   FR M E G  PD   +  L  A     +PP
Sbjct: 339 RNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDHPP 376



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 3/304 (0%)

Query: 365 LIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           ++ GLC   R+ ++ E     +E +  +P   +  ++   LC+   V  A +L RKM   
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 424 GH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           G   P       L+  LCK  +   A   + +  +  F PD+V Y+  +  L  + RVD 
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL  F  +   G  P +V++N II+GLC+A+R+A+A ++FNEMI +   P++ TY+++I+
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G CKS  +D+A   L RM+  E   PD++ YT L+ G   AGR D A+ L   M  +GC 
Sbjct: 196 GLCKSDQLDEAQQLLDRMV-SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 254

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T+  +I  LCK  R   A   FR +      P++  + ALI  +          +V
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314

Query: 663 LKEM 666
           ++EM
Sbjct: 315 MREM 318



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 181/409 (44%), Gaps = 54/409 (13%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIE-RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           ++   SI+L    + G V +A E  +  ++  + + +  ++  LI+G  K  RVD A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 193 FDKMTKSGFA-SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           F KM  +G    +A  Y+ ++ GLCK  +L+ A  + +E +     PD            
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPD------------ 116

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                                 +  N++M  L   G +D+A      M +          
Sbjct: 117 ---------------------VVTYNTLMAALFQLGRVDEALATFTQMTE---------- 145

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                +G V P   SF+ II  L +  +L  AL +F EM       N+  Y+ +IDGLC 
Sbjct: 146 -----EGYV-PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 199

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           S++L+E+ +LL  M   G +P       +         +  AL L+R+M  QG  P V  
Sbjct: 200 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 259

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T++I +LCK G+  +A     ++V     P++V YSA IGG     RVD   ++ R++ 
Sbjct: 260 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM- 318

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
              C P+VV YN +I GL    R  EA  +F EM   G +P   TY  L
Sbjct: 319 --ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 130/249 (52%), Gaps = 3/249 (1%)

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAF-RFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M V+G +   +  +++++ LC+ G+  +A   F   +      PD+V Y+  I GL  + 
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 479 RVDLALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           RVD A +LFR  + A GC P+   YN ++ GLCK  R+  A  +  E   +   P V TY
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N L+    + G +D+A+   ++M E E   P ++++  +I GLC A R  DA+ ++NEM 
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTE-EGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           ++   PN +T+  +I GLCK D+   A      M  +G +PD+  +  L+  F +     
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239

Query: 658 LAFEVLKEM 666
            A  +L+ M
Sbjct: 240 SALGLLRRM 248



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 35/377 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV-EMRLKEMQD 94
           L RC    G V +A   FD         P+  SY  L+  LCK   VD   ++  K +  
Sbjct: 20  LCRC----GRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   + +T   L+   C   + D A +V  E     +  + V ++ L+ A  + G VD+
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A     +M +        +F  +I G  +  R+  AL++F++M    F  +   Y V+I 
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWED--R 267
           GLCK+ QL+ A QL   M   G  PD    + L+   S  G L     LL + + +    
Sbjct: 196 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 255

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           DV T T++ + + ++    G +D A+ + + ++  +                 SPN  ++
Sbjct: 256 DVVTYTVVIDKLCKV----GRVDDAHEIFRELVANK----------------CSPNVVTY 295

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I    +  ++D    + REM    C  NV  YN +I GL   +R EE+Y + REM E
Sbjct: 296 SALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352

Query: 388 SGFKPTHFTLNSMFRCL 404
            GF P   T   + R L
Sbjct: 353 CGFVPDARTYRGLKRAL 369


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 246/541 (45%), Gaps = 21/541 (3%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACEL 157
           D +T    +Q    +G  D+A+ +   +   G    + FS  +++    K G    A +L
Sbjct: 151 DTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKL 210

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            + M +  +  N  T+  +I G +KK  ++   +L+ +M + G   +   Y+V++ GLC+
Sbjct: 211 FDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCR 270

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLL 275
             ++     +  EM    + PD    S L    S  G+   ++    E   + V      
Sbjct: 271 AGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYT 330

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           C+ ++  L  +G I +A  +LQ ++              + + TV  NT     +IN   
Sbjct: 331 CSILLNGLCKDGKISKAEEVLQTLVNSG-----------LLQTTVIYNT-----LINGYC 374

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G L+ A S+F++M       +   YN LI+GL    R+ E+++L+ EME++G  P+  
Sbjct: 375 QIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVE 434

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++     R   +     ++  M+ +G +P V     ++   CK+GK +EA   L DM
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
             +  LP    Y+A I   I+    D A  L   + + G  P +V YN++I GLCK  ++
Sbjct: 495 FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQI 554

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
           +EAE+L + +   GL P V +YN LI+  C   N D+A L L + + K    P   TY  
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRA-LELEKEMWKCGIKPSPRTYRM 613

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L   L  AGR  +   L+ +M +K   P    +  ++    KC          + M +KG
Sbjct: 614 LFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673

Query: 636 M 636
           +
Sbjct: 674 I 674



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 228/507 (44%), Gaps = 24/507 (4%)

Query: 149 GEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           G++D+A  ++ RM  D     N  ++ V+I G  K      A++LFD+M +     +   
Sbjct: 166 GDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHIT 225

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+ +I G  K   LE   +L+S+M   G+ P+    + L++     G +           
Sbjct: 226 YNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMG---------- 275

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS-- 325
              T  +L     R +V +G     Y++L     G         ML +F+ +V       
Sbjct: 276 --ETAAVLDEMASRKMVPDGF---TYSIL---FDGHSRTGDSQTMLSLFEESVKKGVKIG 327

Query: 326 --SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +  I++N L KDGK+  A  + + +   G +Q   +YN LI+G C    LE ++ + +
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M+    +P H T N++   L + + +  A +LV +M   G  P V+    LI    + G
Sbjct: 388 QMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAG 447

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  + F  L+DM ++G  P++V Y + +       ++  A+ +  D+      P    YN
Sbjct: 448 QLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYN 507

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            II    +     +A  L  +M + G+ PS+ TYNLLI G CK   I +A   L   L  
Sbjct: 508 AIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS-LRN 566

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +PDVI+Y TLI   C     D A+ L  EM + G  P+  T+  L + L    R   
Sbjct: 567 YGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHE 626

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
               ++ M +K + P   ++  ++ A+
Sbjct: 627 MENLYQQMLDKDVVPCSGIYNIMVDAY 653



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 180/383 (46%), Gaps = 36/383 (9%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            V PN  +++ +I+  +K G L+    L+ +M + G   NV  YN L+ GLC + R+ E+
Sbjct: 218 AVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGET 277

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             +L EM      P  FT + +F    R  D    L+L  +   +G +      ++L+  
Sbjct: 278 AAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNG 337

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK GK  +A   L  +V  G L   V Y+  I G   I  ++ A  +F+ + +    PD
Sbjct: 338 LCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPD 397

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + YN +I+GL K +R+ EA DL  EM   G+ PSV T+N LI+ + ++G +++  + LS
Sbjct: 398 HITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILS 457

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGR--------------------------------- 585
            M EK    P+V++Y ++++  C  G+                                 
Sbjct: 458 DMQEK-GLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIEC 516

Query: 586 --PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
              D A ML  +M+  G  P+ +T+  LI GLCK  +   A      ++  G+ PD+  +
Sbjct: 517 GSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISY 576

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             LISA     N   A E+ KEM
Sbjct: 577 NTLISACCYRSNTDRALELEKEM 599



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 219/523 (41%), Gaps = 53/523 (10%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P A  +  +I  L   G   +A  LFD++  + + VPN+ +YN +++   K   ++   
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAV-VPNHITYNTMIDGHIKKGDLESGF 243

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAF 145
               +M  +G   +  T   LL   C +G+  +  +V +E+     V D   +SIL    
Sbjct: 244 RLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           S+ G+      L E      +++   T  +L++G  K  ++ KA ++   +  SG     
Sbjct: 304 SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            +Y+ +I G C+   LE A  ++ +MK   I PD    + LI            V+ I E
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK-------VERITE 416

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
             D+                                          ++ + K  V+P+  
Sbjct: 417 AHDL------------------------------------------VIEMEKNGVNPSVE 434

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ +I+   + G+L+    +  +M + G   NV  Y ++++  C + ++ E+  +L +M
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 P     N++            A  L  KM+  G  P +    LLIK LCK  + 
Sbjct: 495 FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQI 554

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   L  +   G  PD++ Y+  I         D ALEL +++   G  P    Y ++
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            S L  A RV E E+L+ +M+ K ++P    YN++++ + K G
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCG 657



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 2/346 (0%)

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC-MQNVFLYNN 364
           ADV     ++      P+T +++  +   +  G LD A+ + R M   G    N F YN 
Sbjct: 134 ADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNV 193

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I GL  +    ++ +L  EM E    P H T N+M     ++ D+     L  +M   G
Sbjct: 194 VIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHG 253

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P V    +L+  LC+ G+  E    L +M     +PD   YS    G          L
Sbjct: 254 LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTML 313

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF +    G        +I+++GLCK  ++++AE++   ++  GL+ +   YN LING+
Sbjct: 314 SLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGY 373

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C+ G+++ A     +M  +    PD ITY  LI+GL    R  +A  L  EME+ G  P+
Sbjct: 374 CQIGDLEGAFSIFQQMKSRLI-RPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             TF  LI    +  +     +    M+EKG+KP++  + ++++AF
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAF 478



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%)

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R A+    F  ++     P   T+N  +     +G++D+A+  L RM    + +P+  +Y
Sbjct: 132 RHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSY 191

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +I GL  AG   DA+ L++EM EK   PN IT+  +I G  K     +    +  M  
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251

Query: 634 KGMKPDMFVFVALISAF 650
            G+KP++  +  L+S  
Sbjct: 252 HGLKPNVITYNVLLSGL 268


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 297/655 (45%), Gaps = 75/655 (11%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           Q++  S   +S  A   LI      G+ E+A   F  + R+  C P+ +++N +L  L +
Sbjct: 117 QELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFG-LMRDFDCKPDLFAFNLILHFLVR 175

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
             +  L      +M       D  T   L+   C + +   AL +F+E+ D G + ++ +
Sbjct: 176 KEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQII 235

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +SI+L    +  ++  A  L  +M       +  T+ VL++GF K   +D A  L   +T
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G       Y  +I GL + ++ E A   Y +M    I PD  + + +I   S EG +T
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 258 LLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             +  + E  +R +   T+  N++++     G +D+A +L                 L I
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL----------------RLEI 399

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            K    PN  ++ I+I  + K+G ++ A  +F+EM ++GC+ +V  +N+LI+GLC +NRL
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EE+  L  +ME    KP      S+F  L +  D V  +  ++ M               
Sbjct: 460 EEARLLFYQMEIVR-KP------SLFLRLSQGTDKVFDIASLQVM--------------- 497

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           ++ LC+ G  ++A++ L  +V  G LPDI  Y+  I G      ++ A +LF+++   G 
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH 557

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
            PD V Y  +I GL +A R  +A ++F +M+ KG +P  +TY  ++   C+  NI  A+ 
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617

Query: 555 ------------------------------LCLSRMLEKE--SGSPDVITYTTLIDGLCI 582
                                           + R+LE +  S + D+  YT  + GL  
Sbjct: 618 VWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ 677

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           A R  +A  +++ +++     +  + + LI  LC  +    A+  F    E+G +
Sbjct: 678 AKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFR 732



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 230/511 (45%), Gaps = 33/511 (6%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
             +LF    KS       + D+IIG L K    E+  ++  E+K S I    E  S LI 
Sbjct: 77  GFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIE 136

Query: 249 SCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S+ G  E  +    +  D D        N I+  LV   +   A  +   M+K     
Sbjct: 137 AYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNP 196

Query: 307 DV---GV------------EMLMIFKGT----VSPNTSSFDIIINTLLKDGKLDLALSLF 347
           DV   G+            + L++F       + PN   + I+++ L +  K+  A  LF
Sbjct: 197 DVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLF 256

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   GC +++  YN L++G C S  L++++ LL+ + + G          +   L R 
Sbjct: 257 SKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRA 316

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +    A    +KM  +  +P V   T++I+ L + G+  EA   L +M + G  PD +CY
Sbjct: 317 RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICY 376

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I G  D+  +D A  L  +I  H C P+   Y+I+I G+CK   + +A+ +F EM  
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM---------LEKESGSP---DVITYTT 575
            G +PSV T+N LING CK+  +++A L   +M         L    G+    D+ +   
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +++ LC +G    A  L  ++ + G  P+  T+  LI G CK      A   F+ M+ KG
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             PD   +  LI           A E+ ++M
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 148/637 (23%), Positives = 259/637 (40%), Gaps = 89/637 (13%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
            R+ A L  LA      +C ++P  +  G LI  L      ++A +LFD++   G+ +PN
Sbjct: 174 VRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGI-LPN 232

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
              Y+ +L  LC++  +   +    +M+  G   D  T   LL  +C SG  D A ++  
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 126 EIIDHGWV------------------------------------DEHVFSILLVAFSKWG 149
            +   G +                                    D  +++I++   S+ G
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEG 352

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            V +A  L+  M +  +R +   +  LI GF     +D+A  L  +++K     +   Y 
Sbjct: 353 RVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYS 412

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           ++I G+CKN  +  A  ++ EM+  G  P     + LI        L       ++   V
Sbjct: 413 ILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIV 472

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV-----EMLM-IFKGTVSPN 323
              +L       + +S G+ D+ +++    +  E + + G+     ++LM +    V P+
Sbjct: 473 RKPSLF------LRLSQGT-DKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPD 525

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++I+IN   K G ++ A  LF+EM   G M +   Y  LIDGL  + R E++ E+  
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M + G  P   T  ++    CR  ++  AL++  K  ++    W      ++ E   + 
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKY-LRDFRGWEDEKVRVVAESFDNE 644

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +   A R L +M                    DIK  +                D+  Y 
Sbjct: 645 ELQTAIRRLLEM--------------------DIKSKNF---------------DLAPYT 669

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I + GL +A+R  EA  +F+ +    +  S A+  +LI   C   N+D AM      LE+
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLER 729

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                  I    L+  L    R DDA+ L N ME  G
Sbjct: 730 GFRLMPPIC-NQLLCNLLHLDRKDDALFLANRMEASG 765



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 175/393 (44%), Gaps = 43/393 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+    +G ++EA  L  ++ +   C PNN++Y+ L+  +CK+  ++  +   KEM+  
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHD-CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-----------IDHGW---VDEHVFSIL 141
           G      T   L+   C + + ++A  +F ++           +  G     D     ++
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVM 497

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +    + G + KA +L+ ++ D  +  + +T+ +LI+GF K   ++ A +LF +M   G 
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH 557

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D+  Y  +I GL +  + E AL+++ +M   G  P+      ++T    E  ++L + 
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617

Query: 262 ---------EIWEDRDVNTMT------LLCNSIMRIL---VSNGSIDQA------YNLLQ 297
                      WED  V  +        L  +I R+L   + + + D A        L+Q
Sbjct: 618 VWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ 677

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           A    E  A   V  L  FK  +S  ++S  ++I  L     LD+A+ +F    + G   
Sbjct: 678 AKRDCEAFAIFSV--LKDFKMNIS--SASCVMLIGRLCMVENLDMAMDVFLFTLERGFRL 733

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
              + N L+  L + +R +++  L   ME SG+
Sbjct: 734 MPPICNQLLCNLLHLDRKDDALFLANRMEASGY 766


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 239/509 (46%), Gaps = 28/509 (5%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            LN   F +L+ GF +     KA+ LF  M ++    D   Y+ +I GLCK K+L  A +
Sbjct: 126 HLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKE 185

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILV 284
           L+ EMKG    P+    S LI      G++     + E  E   +     + ++++    
Sbjct: 186 LFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFC 245

Query: 285 SNGSIDQAYNLLQAMIKGEPIADV------------------GVEMLMIFKG-TVSPNTS 325
           S G I++   L   M++     +V                    +ML    G  V P+  
Sbjct: 246 SKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVV 305

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++ ++ + L K+G+   A+ +   M + G   N   YN +I+GLC   R++++  +L  M
Sbjct: 306 AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365

Query: 386 EESGFKPTHFTLNSMFRCLC---RRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCK 441
            + G KP   T +++ + LC   +  + V  LNL+  M  + H +P V    L+I+ELCK
Sbjct: 366 AKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL--MSKEFHIKPDVFAFNLVIQELCK 423

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             +   A R    MV+ GF  +IV Y+  I G +   ++  ALEL++D    G  P+   
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y ++I+GLCK Q ++ A+ LFN+    G  P+V+ YN L+   C+  +++QA      M 
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM- 542

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
              +  PDV+++  +IDG   AG  + A  L  EM      P+ ITF  LI    K  + 
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A   +  M   G  PD  +F +L+  +
Sbjct: 603 DEAASLYERMVSCGHVPDAVLFDSLLKGY 631



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 253/557 (45%), Gaps = 48/557 (8%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+  + Y    LL+ +C SG   KA+ +F  +  +  + + V ++ ++    K   + +A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + M     + N  TF  LI GF K   V++   L ++M K G   D  +Y  +I G
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------- 267
            C    +E   +L++EM    +TP+    S L+ +        L  K+ W++        
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNA--------LCKKQKWKEAAQMLDTM 295

Query: 268 -------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGT 319
                  DV   T+L + + +    NG    A  +L  M+K GE                
Sbjct: 296 TGCKVRPDVVAYTVLADGLSK----NGRASDAIKVLDLMVKRGE---------------- 335

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN  +++ IIN L K+G++D AL +   M + G   +V  Y+ L+ GLC   +++E+ 
Sbjct: 336 -EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 380 ELLREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +LL  +  +E   KP  F  N + + LC+++ +  A  +   M  +G    +    +LI 
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
                GK  +A     D V  G  P+   Y+  I GL  ++ + +A  LF    A G  P
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            V  YN +++ LC+   V +A +LF EM      P V ++N++I+G  K+G+++ A   L
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             ML      PD IT++ LI+     G+ D+A  L+  M   G  P+ + F +L+ G   
Sbjct: 575 LEMLNMNL-VPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSL 633

Query: 618 CDRPRAALVHFRMMKEK 634
             +    +   + M +K
Sbjct: 634 KGKTEKVVSMLQQMADK 650



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 229/487 (47%), Gaps = 36/487 (7%)

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE-------GELTLLVK 261
           + +I  L K K  +  + ++S+M    + P F  LS LI S  +        G L L++K
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSID--------------QAYN-LLQAMIKGEPIA 306
             +   +V    LL     +   S+ ++D               +YN ++  + KG+ + 
Sbjct: 123 RGFH-LNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL- 180

Query: 307 DVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
              VE   +FK    G   PN+ +F  +I+   K+G ++    L  EM ++G   +VF+Y
Sbjct: 181 ---VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVY 237

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + LI G C+   +E   EL  EM      P   T + +   LC++Q    A  ++  M  
Sbjct: 238 SALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTG 297

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
               P V   T+L   L K+G+A +A + L  MV+ G  P+ V Y+A I GL    RVD 
Sbjct: 298 CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDD 357

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK--GLIPSVATYNLL 540
           AL +   +   G  PDVV Y+ ++ GLC   ++ EA DL N +++K   + P V  +NL+
Sbjct: 358 ALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLV 417

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           I   CK   +  A      M+E+  G P +++TY  LIDG   AG+   A+ LW +  + 
Sbjct: 418 IQELCKQRRLRHAKRVYYTMVER--GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G +PN  T+  LI GLCK      A   F   +  G +P +  +  L+++   E +   A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 660 FEVLKEM 666
             + +EM
Sbjct: 536 RNLFQEM 542



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 237/530 (44%), Gaps = 49/530 (9%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  LF ++K  G C PN+ +++ L++  CK+  V+     L+EM+  G   D +  + L
Sbjct: 182 EAKELFKEMK-GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C+ G  ++   +FNE++        V +S L+ A  K  +  +A ++++ M  C +
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           R +   + VL  G  K  R   A+++ D M K G   +   Y+ II GLCK  +++ AL 
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALG 360

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           +   M   G  PD    S L+                           LC          
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKG-------------------------LCGV-------- 387

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G ID+A +LL               +LM  +  + P+  +F+++I  L K  +L  A  +
Sbjct: 388 GKIDEAVDLLN--------------LLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           +  M + G   N+  YN LIDG  ++ +L ++ EL ++  +SG  P   T   +   LC+
Sbjct: 434 YYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK 493

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            Q +  A  L  K R  G  P V     L+  LC+     +A     +M      PD+V 
Sbjct: 494 MQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVS 553

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           ++  I G +    V+ A EL  ++      PD + ++I+I+   K  ++ EA  L+  M+
Sbjct: 554 FNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           + G +P    ++ L+ G+   G  ++ +  L +M +K+      +T T L
Sbjct: 614 SCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 173/405 (42%), Gaps = 60/405 (14%)

Query: 26  CFMSPGALGFLIRC--LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           C + P  + + +    L   G   +A  + D + + G   PNN +YN ++  LCK   VD
Sbjct: 298 CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNAIINGLCKEGRVD 356

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID---HGWVDEHVFSI 140
                L+ M   G   D  T + L++  C  G+ D+A+ + N ++    H   D   F++
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++    K   +  A  +   M +     N  T+ +LI G++   ++ KAL+L+     SG
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
            + +AA Y V+I GLCK + L +A  L+++ + SG  P                     V
Sbjct: 477 ISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPT--------------------V 516

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            E              N++M  L    S++QA NL Q M       DV V   +I  GT+
Sbjct: 517 SEY-------------NTLMASLCRESSVEQARNLFQEMRNANHDPDV-VSFNIIIDGTL 562

Query: 321 S--------------------PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                                P+  +F I+IN  LK G+LD A SL+  M   G + +  
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L+++L+ G     + E+   +L++M +          +++  CLC
Sbjct: 623 LFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 1/275 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P++ + N++   L + +     +++  KM      P     + LI+      K   AF  
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  +++ GF  ++  ++  + G         A++LF  +  +   PD V+YN +I+GLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            +R+ EA++LF EM      P+  T++ LI+G+CK+G++++    L  M EK     DV 
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM-EKMGLEGDVF 235

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y+ LI G C  G  +    L+NEM  K   PN +T+  L+  LCK  + + A      M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               ++PD+  +  L            A +VL  M
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P     +  I  L   K  D  + +   + +    P   + + +I      Q+ + A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM--LCLSRMLEKESGSPDVITYTTLID 578
           +   ++ +G   +V  +NLL+ G+C+SG+  +AM   C   M+++    PD ++Y T+I+
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFC---MMKRNCLIPDCVSYNTVIN 172

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC   R  +A  L+ EM+   C PN +TF ALI G CK             M++ G++ 
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D+FV+ ALIS F S+ +     E+  EM
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEM 260


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 237/504 (47%), Gaps = 49/504 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L  +  +G   +  S+F+ I   D+  V+  +  +L++A++     +   E  +R    
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
             +L+  +   L+   +K++R      ++ +M +     +   ++V+I  LCK  ++  A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             +  +MK  G +P+    + LI      G                              
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLG------------------------------ 272

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG + +A  +L+ M++ +                VSPN ++F+I+I+   KD  L  ++
Sbjct: 273 GNGKMYKADAVLKEMVEND----------------VSPNLTTFNILIDGFWKDDNLPGSM 316

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F+EM       NV  YN+LI+GLCN  ++ E+  +  +M  +G +P   T N++    
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   +  AL++   ++ QG  P  +   +LI   CK GK  + F    +M +EG +PD+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  I GL     ++ A +LF  + + G  PD+V ++I++ G C+     +A  L  E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   GL P   TYN+++ G+CK GN+  A    ++M ++     +V +Y  L+ G    G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
           + +DA ML NEM EKG  PNRIT+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITY 579



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 183/360 (50%), Gaps = 6/360 (1%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+ A++K    ADV      + +  + PN  +F+++IN L K GK++ A  +  +M   G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 355 CMQNVFLYNNLIDGLCN---SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           C  NV  YN LIDG C    + ++ ++  +L+EM E+   P   T N +     +  ++ 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           G++ + ++M  Q  +P V     LI  LC  GK  EA      MV  G  P+++ Y+A I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      +  AL++F  +   G  P    YN++I   CK  ++ +   L  EM  +G++
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P V TYN LI G C++GNI+ A     ++  K  G PD++T+  L++G C  G    A M
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK--GLPDLVTFHILMEGYCRKGESRKAAM 491

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAF 650
           L  EM + G  P  +T+  ++ G CK    +AA  +  +M KE+ ++ ++  +  L+  +
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 204/449 (45%), Gaps = 38/449 (8%)

Query: 222 EMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           ++ L+ YS + K S I+   E+  KL+ S ++    + +                  S +
Sbjct: 82  DLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKI-----------------RSFL 124

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              V NGS  Q +++  A+     + D            V  N+   D+++     + + 
Sbjct: 125 DGFVRNGSDHQVHSIFHAI----SMCD-----------NVCVNSIIADMLVLAYANNSRF 169

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           +L    F+     G   +      L+  L   NR  +   + +EM     +P  FT N +
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVV 229

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTDMVQ 457
              LC+   +  A +++  M+V G  P V     LI   CK   +GK  +A   L +MV+
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
               P++  ++  I G      +  ++++F+++      P+V++YN +I+GLC   +++E
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  + ++M++ G+ P++ TYN LING+CK+  + +A+      ++ +   P    Y  LI
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS-VKGQGAVPTTRMYNMLI 408

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           D  C  G+ DD   L  EME +G  P+  T+  LI GLC+     AA   F  +  KG+ 
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           PD+  F  L+  +  +     A  +LKEM
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEM 496



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 191/418 (45%), Gaps = 55/418 (13%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN---SGQFDKA 120
           PN +++N ++ ALCK+  ++     +++M+ YG   +  +   L+  YC    +G+  KA
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 121 LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +V  E++++        F+IL+  F K   +  + ++ + M D +++ N  ++  LI+G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                ++ +A+ + DKM  +G   +   Y+ +I G CKN  L+ AL ++  +KG G  P 
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP- 399

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                                            T + N ++      G ID  + L + M
Sbjct: 400 --------------------------------TTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            +   + DVG                +++ +I  L ++G ++ A  LF ++T  G + ++
Sbjct: 428 EREGIVPDVG----------------TYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDL 470

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             ++ L++G C      ++  LL+EM + G KP H T N + +  C+  ++  A N+  +
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530

Query: 420 MRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           M  +      V    +L++   + GK  +A   L +M+++G +P+ + Y      ++D
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 196/441 (44%), Gaps = 24/441 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  Y N+ +F+     F     +G+ +       L++A  K         + + M    
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK---NKQLE 222
           I+ N  TF V+I+   K  +++KA  + + M   G + +   Y+ +I G CK   N ++ 
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            A  +  EM  + ++P+    + LI     +  L   +K   E  D+DV    +  NS++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L + G I +A ++   M+                   V PN  +++ +IN   K+  L
Sbjct: 339 NGLCNGGKISEAISMRDKMVSA----------------GVQPNLITYNALINGFCKNDML 382

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             AL +F  +   G +    +YN LID  C   ++++ + L  EME  G  P   T N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              LCR  ++  A  L  ++  +G    V  + +L++  C+ G++ +A   L +M + G 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFH-ILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP-DVVAYNIIISGLCKAQRVAEAE 519
            P  + Y+  + G      +  A  +   +        +V +YN+++ G  +  ++ +A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 520 DLFNEMITKGLIPSVATYNLL 540
            L NEM+ KGL+P+  TY ++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIV 582



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 102/208 (49%), Gaps = 20/208 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +G +++   L ++++REG+ VP+  +YNCL+  LC++ +++  +    ++   
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGI-VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   L++ YC  G+  KA  +  E+   G    H+ ++I++  + K G +  A
Sbjct: 466 GLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524

Query: 155 CELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             +  +M+ +  +R+N  ++ VL+ G+ +K +++ A  L ++M + G   +   Y+++  
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-- 582

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFE 241
                           EM   G  PD E
Sbjct: 583 --------------KEEMVDQGFVPDIE 596



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    LI  L   G +E A  LFDQ+  +GL  P+  +++ L+E  C+        M LK
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLK 494

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKW 148
           EM   G      T   +++ YC  G    A ++  ++     +  +V  +++LL  +S+ 
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV-DKALQLFDKMTKS 199
           G+++ A  L+  M +  +  N  T+ ++    V +  V D    LF+  TKS
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 245/527 (46%), Gaps = 52/527 (9%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKW 148
           ++      G+    +  +    C SG + ++L +   ++  G+  + +  + L+  F   
Sbjct: 78  RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             + KA  ++E ++    + +   +  LI+GF K +R+D A ++ D+M    F+ D   Y
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +++IG LC   +L++AL+               +L++L+   SD  + T++         
Sbjct: 197 NIMIGSLCSRGKLDLALK---------------VLNQLL---SDNCQPTVI--------- 229

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
             T T+L  + M      G +D+A  L+  M+                +G + P+  +++
Sbjct: 230 --TYTILIEATML----EGGVDEALKLMDEMLS---------------RG-LKPDMFTYN 267

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II  + K+G +D A  + R +   G   +V  YN L+  L N  + EE  +L+ +M   
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T + +   LCR   +  A+NL++ M+ +G  P       LI   C+ G+   A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             FL  M+ +G LPDIV Y+  +  L    + D ALE+F  +   GC P+  +YN + S 
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L  +     A  +  EM++ G+ P   TYN +I+  C+ G +D+A   L  M   E   P
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF-HP 506

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            V+TY  ++ G C A R +DAI +   M   GC PN  T+  LI G+
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 209/474 (44%), Gaps = 51/474 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF     + KA+++ + + K G   D   Y+ +I G CK  +++ A ++   M+   
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD                                 T+  N ++  L S G +D A  +
Sbjct: 189 FSPD---------------------------------TVTYNIMIGSLCSRGKLDLALKV 215

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  ++                     P   ++ I+I   + +G +D AL L  EM   G 
Sbjct: 216 LNQLLSD----------------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN +I G+C    ++ ++E++R +E  G +P   + N + R L  +        
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK 319

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ KM  +  +P V   ++LI  LC+ GK  EA   L  M ++G  PD   Y   I    
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R+D+A+E    + + GC PD+V YN +++ LCK  +  +A ++F ++   G  P+ +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +YN + +    SG+  +A+  +  M+      PD ITY ++I  LC  G  D+A  L  +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           M      P+ +T+  ++ G CK  R   A+     M   G +P+   +  LI  
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 222/474 (46%), Gaps = 60/474 (12%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E    P+ ++YN L+   CK   +D     L  M+   +  D  T   ++   C+ G+ D
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            AL V N+++                                 D+C   +   T+ +LI 
Sbjct: 211 LALKVLNQLLS--------------------------------DNCQPTV--ITYTILIE 236

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
             + +  VD+AL+L D+M   G   D   Y+ II G+CK   ++ A ++   ++  G  P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEP 296

Query: 239 D---FEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           D   + IL + + +    +EGE  L+ K   E  D N +T   + ++  L  +G I++A 
Sbjct: 297 DVISYNILLRALLNQGKWEEGE-KLMTKMFSEKCDPNVVTY--SILITTLCRDGKIEEAM 353

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           NLL+               LM  KG ++P+  S+D +I    ++G+LD+A+     M   
Sbjct: 354 NLLK---------------LMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC+ ++  YN ++  LC + + +++ E+  ++ E G  P   + N+MF  L    D + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 414 LNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           L+++ +M   G +P  + +N++ I  LC+ G   EAF  L DM    F P +V Y+  + 
Sbjct: 458 LHMILEMMSNGIDPDEITYNSM-ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           G     R++ A+ +   +  +GC P+   Y ++I G+  A   AEA +L N+++
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 193/404 (47%), Gaps = 20/404 (4%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C++     +L L   M   G  PD  + +KLI     +G  TL        R++      
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLI-----KGFFTL--------RNIPKAV-- 144

Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              +M IL   G  D  AYN L+    K   I D    +  +     SP+T +++I+I +
Sbjct: 145 --RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLDLAL +  ++    C   V  Y  LI+       ++E+ +L+ EM   G KP 
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            FT N++ R +C+   V  A  +VR + ++G EP V    +L++ L   GK  E  + +T
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M  E   P++V YS  I  L    +++ A+ L + +   G  PD  +Y+ +I+  C+  
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+  A +    MI+ G +P +  YN ++   CK+G  DQA+    ++ E    SP+  +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSY 441

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            T+   L  +G    A+ +  EM   G  P+ IT+ ++I+ LC+
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 22/436 (5%)

Query: 27  FMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           F  P    +  LI     +  +++A  + D+++ +    P+  +YN ++ +LC    +DL
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTVTYNIMIGSLCSRGKLDL 211

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLV 143
               L ++          T T L++     G  D+AL + +E++  G   D   ++ ++ 
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
              K G VD+A E++  ++      +  ++ +L+   + + + ++  +L  KM       
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK-- 261
           +   Y ++I  LC++ ++E A+ L   MK  G+TPD      LI +   EG L + ++  
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E           +  N+++  L  NG  DQA  +   +       +VG           S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL------GEVGC----------S 435

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN+SS++ + + L   G    AL +  EM   G   +   YN++I  LC    ++E++EL
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M    F P+  T N +    C+   +  A+N++  M   G  P     T+LI+ +  
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555

Query: 442 HGKAMEAFRFLTDMVQ 457
            G   EA     D+V+
Sbjct: 556 AGYRAEAMELANDLVR 571


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 250/535 (46%), Gaps = 33/535 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +YN +L AL  + S+      L  M  +G   + YT   L++  C  G+ ++A+ 
Sbjct: 115 APSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           V  ++   G     V ++ L+ AF + GE+D A  ++  M ++ N + N  TF  +++G 
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R++ A ++FD+M + G A D   Y+ ++ G CK   L  +L ++SEM   G+ PD 
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDV 293

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + LI +    G L   V  + + R+     L  N +    + +G   + + L  A++
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERG---LRMNEVTFTALIDGFCKKGF-LDDALL 349

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E +   G++          P+   ++ +IN   K G++DLA  L REM       +V 
Sbjct: 350 AVEEMRKCGIQ----------PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ +I G C    L+ +++L ++M + G  P   T +S+ R LC  + +  A  L   M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G +P     T LI   CK G   +A     +M+++G LPD+V YS  I GL    R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 481 DLALELFRDICAHGCCPDVVAYNII---------------ISGLCKAQRVAEAEDLFNEM 525
             A  L   +      PD + Y+ +               + G C    + EA+ ++  M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           + +      + Y++LI+G C+ GN+ +A+    +ML +   SP+  +  +L+ GL
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML-RSGFSPNSTSTISLVRGL 633



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 233/496 (46%), Gaps = 35/496 (7%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +    M + G A +   Y++++  LC   +LE A+ +  +M+G+G  P+    + L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 249 SCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +    GEL     +V  + E+ +     +  NS++  L   G ++ A  +   M++    
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE--- 252

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         ++P+  S++ +++   K G L  +L++F EMTQ G + +V  + +L
Sbjct: 253 -------------GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I   C +  LE++  L+ +M E G +    T  ++    C++  +  AL  V +MR  G 
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +P V     LI   CK G+   A   + +M  +   PD+V YS  I G   +  +D A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L + +   G  PD + Y+ +I GLC+ +R+ +A +LF  M+  G+ P   TY  LI+G C
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K GN+++A+     M+ K    PDV+TY+ LI+GL  + R  +A  L  ++  +   P+ 
Sbjct: 480 KEGNVEKALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 606 ITF---------------MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           I +               +AL+ G C     + A   ++ M ++  K D  V+  LI   
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 651 LSELNPPLAFEVLKEM 666
               N   A    K+M
Sbjct: 599 CRGGNVRKALSFHKQM 614



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 243/528 (46%), Gaps = 42/528 (7%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P A+ +  L+      G ++ A  +   ++ EG   PN  ++N ++  LCK+  ++   
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
               EM   G   D  +   LL  YC  G   ++L+VF+E+   G V + V F+ L+ A 
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G +++A  L+ +M +  +R+NE TF  LI GF KK  +D AL   ++M K G     
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEI 263
             Y+ +I G CK  ++++A +L  EM+   + PD    S +I+     G L     + + 
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              + V    +  +S++R L     ++ A  L + M++      +GV+          P+
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ------LGVQ----------PD 467

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +I+   K+G ++ ALSL  EM + G + +V  Y+ LI+GL  S R +E++ LL 
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--------HEPWVKHN--- 432
           ++      P +   +++  C C + +    + L++   ++G        ++  +  N   
Sbjct: 528 KLYHEDPVPDNIKYDALMLC-CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 433 -----TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                ++LI   C+ G   +A  F   M++ GF P+     + + GL +   V  A    
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 488 RDICAHGCCP--DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           +D+    CCP  D  A   +I    K   V    D+   M   GL+PS
Sbjct: 647 QDLLT--CCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 34/207 (16%)

Query: 494 GCCPDVVA----------------------------------YNIIISGLCKAQRVAEAE 519
           G  P V A                                  YNI++  LC   R+ EA 
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  +M   G  P+  TYN L+  +C++G +D A   +S M E+ +  P+++T+ ++++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC AGR + A  +++EM  +G AP+ +++  L++G CK      +L  F  M ++G+ PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  F +LI A     N   A  ++ +M
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQM 319


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 183/332 (55%), Gaps = 1/332 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  ++  A+SL  +M +IG   ++  YN +ID LC + R+ ++++ 
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            +E+E  G +P   T  ++   LC       A  L+  M  +   P V   + L+    K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +GK +EA     +MV+    PDIV YS+ I GL    R+D A ++F  + + GC  DVV+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CKA+RV +   LF EM  +GL+ +  TYN LI G+ ++G++D+A    S+M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM- 391

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD+ TY  L+ GLC  G  + A++++ +M+++    + +T+  +I G+CK  + 
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A   F  +  KG+KPD+  +  ++S   ++
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 178/334 (53%), Gaps = 1/334 (0%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           T L+D KL+ A+ LF +M +     ++  +N L+  +    + +    L ++ME  G + 
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N +  C C    V  AL+++ KM   G+EP       L+   C+  +  +A   +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV+ G+ PDIV Y+A I  L   KRV+ A + F++I   G  P+VV Y  +++GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R ++A  L ++MI K + P+V TY+ L++ + K+G + +A      M+ + S  PD++T
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVT 297

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++LI+GLC+  R D+A  +++ M  KGC  + +++  LI G CK  R    +  FR M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++G+  +   +  LI  F    +   A E   +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 176/322 (54%), Gaps = 1/322 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+I+IN      ++ LALS+  +M ++G   +     +L++G C  NR+ ++  L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G+KP     N++   LC+ + V  A +  +++  +G  P V   T L+  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A R L+DM+++   P+++ YSA +   +   +V  A ELF ++      PD+V Y+ +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+GLC   R+ EA  +F+ M++KG +  V +YN LING+CK+  ++  M  L R + +  
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK-LFREMSQRG 360

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              + +TY TLI G   AG  D A   +++M+  G +P+  T+  L+ GLC       AL
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 626 VHFRMMKEKGMKPDMFVFVALI 647
           V F  M+++ M  D+  +  +I
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVI 442



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           ++ A +L   M+K  P                 P+   F+ +++ ++K  K D+ +SL +
Sbjct: 66  LNDAIDLFSDMVKSRPF----------------PSIVDFNRLLSAIVKLKKYDVVISLGK 109

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M  +G   +++ +N +I+  C   ++  +  +L +M + G++P   T+ S+    CRR 
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A++LV KM   G++P +     +I  LCK  +  +AF F  ++ ++G  P++V Y+
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A + GL +  R   A  L  D+      P+V+ Y+ ++    K  +V EA++LF EM+  
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            + P + TY+ LING C    ID+A      M+ K     DV++Y TLI+G C A R +D
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVED 348

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            + L+ EM ++G   N +T+  LI G  +      A   F  M   G+ PD++ +  L+ 
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408

Query: 649 AF 650
             
Sbjct: 409 GL 410



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 220/501 (43%), Gaps = 58/501 (11%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  + L +  ++  D VK      P+   +N LL A+ K    D+V    K+M+  G   
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D YT   ++  +C   Q   ALS+  +++  G+  + V                      
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV---------------------- 156

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       T   L++GF +++RV  A+ L DKM + G+  D   Y+ II  LCK K
Sbjct: 157 ------------TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLL 275
           ++  A   + E++  GI P+    + L+    +    +    LL   I +    N +T  
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY- 263

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            ++++   V NG + +A  L + M++                 ++ P+  ++  +IN L 
Sbjct: 264 -SALLDAFVKNGKVLEAKELFEEMVRM----------------SIDPDIVTYSSLINGLC 306

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
              ++D A  +F  M   GC+ +V  YN LI+G C + R+E+  +L REM + G      
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++ +   +  DV  A     +M   G  P +    +L+  LC +G+  +A     DM
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +     DIV Y+  I G+    +V+ A  LF  +   G  PD+V Y  ++SGLC    +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486

Query: 516 AEAEDLFNEMITKGLIPSVAT 536
            E E L+ +M  +GL+ +  T
Sbjct: 487 HEVEALYTKMKQEGLMKNDCT 507



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 215/453 (47%), Gaps = 23/453 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + + A+ +F++++        V F+ LL A  K  + D    L ++M+   IR +  TF 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I+ F    +V  AL +  KM K G+  D      ++ G C+  ++  A+ L  +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 235 GITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G  PD    + +I S C  +   +     KEI E + +    +   +++  L ++     
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  MIK +                ++PN  ++  +++  +K+GK+  A  LF EM 
Sbjct: 244 AARLLSDMIKKK----------------ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           ++    ++  Y++LI+GLC  +R++E+ ++   M   G      + N++    C+ + V 
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347

Query: 412 GALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             + L R+M  +G     V +NT LI+   + G   +A  F + M   G  PDI  Y+  
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNT-LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +GGL D   ++ AL +F D+       D+V Y  +I G+CK  +V EA  LF  +  KGL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            P + TY  +++G C  G + +     ++M ++
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 200/473 (42%), Gaps = 89/473 (18%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  L+   VK  + D  + L  KM   G  +D   ++++I   C   Q+ +AL +  +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
             G  PD   +  L+                             N   R       +  A
Sbjct: 148 KLGYEPDRVTIGSLV-----------------------------NGFCR----RNRVSDA 174

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            +L+  M+      ++G +          P+  +++ II++L K  +++ A   F+E+ +
Sbjct: 175 VSLVDKMV------EIGYK----------PDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   NV  Y  L++GLCNS+R  ++  LL +M +    P   T +++     +   V+ 
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L  +M     +P +   + LI  LC H +  EA +    MV +G L D+V Y+  I 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 473 GLIDIKRVDLALELFRDICAHG-----------------------------------CCP 497
           G    KRV+  ++LFR++   G                                     P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA--ML 555
           D+  YNI++ GLC    + +A  +F +M  + +   + TY  +I G CK+G +++A  + 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           C    L  +   PD++TYTT++ GLC  G   +   L+ +M+++G   N  T 
Sbjct: 459 C---SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +G L+        V +A  L D++   G   P+  +YN ++++LCK+  V+      KE
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           ++  G   +  T T L+   CNS ++  A  + +++I        + +S LL AF K G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A EL E M   +I  +  T+  LI+G     R+D+A Q+FD M   G  +D   Y+ 
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD-- 268
           +I G CK K++E  ++L+ EM   G+  +    + LI      G++    +E +   D  
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK-AQEFFSQMDFF 394

Query: 269 -VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            ++      N ++  L  NG +++A  + + M K E   D+                 ++
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI----------------VTY 438

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I  + K GK++ A SLF  ++  G   ++  Y  ++ GLC    L E   L  +M++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            G      TL+          D+  +  L++KM   G+ P
Sbjct: 499 EGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAP 530


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 220/464 (47%), Gaps = 27/464 (5%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEI 263
           ++ I+G L K K     + L  +M   GI  +   LS LI      G++    +LL K +
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
                 NT+T    ++M+ L   G + +  +    ++                      N
Sbjct: 73  KLGYXPNTITW--TTLMKGLCLKGEVKKLLHFHDKVVAQ----------------AFQTN 114

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+  ++N L K G+   A+ L R +       NV +Y+ +IDGLC    + E+Y+L  
Sbjct: 115 QVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYS 174

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM+     P   T N++    C    ++GA +L+ +M ++   P V   ++LI  LCK G
Sbjct: 175 EMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG 234

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K   A +    MVQ G  P++  Y+  I GL   KRVD A+ L R++      PD V YN
Sbjct: 235 K--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 292

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I GLCK+ R+  A +L NEM  +G    V TY  L++  CK+ N+D+A     +M  K
Sbjct: 293 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM--K 350

Query: 564 ESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           E G  P + TYT LIDGLC  GR  +A  L+  +  KGC  +  T+  +I+GLCK     
Sbjct: 351 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 410

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            AL     M++ G  P+   F  +I +   +     A ++L EM
Sbjct: 411 EALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 212/475 (44%), Gaps = 52/475 (10%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           K+M   G   +  TL+ L+  +C+ GQ   + S+  +I+  G+    + ++ L+      
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GEV K     +++     + N+ ++  L++G  K      A++L   +       +  MY
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             II GLCK+K +  A  LYSEM    I P+    + LI +    G+L            
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLM----------- 202

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                  A++LL  MI                   ++P+  +F 
Sbjct: 203 ----------------------GAFSLLHEMILKN----------------INPDVYTFS 224

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K+GK   A  +F  M Q+G   NV+ YN +I+GLC   R++E+  LLREM   
Sbjct: 225 ILIDALCKEGKN--AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 282

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T NS+   LC+   +  ALNL+ +M  +G    V   T L+  LCK+    +A
Sbjct: 283 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 342

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M + G  P +  Y+A I GL    R+  A ELF+ +   GCC DV  Y ++ISG
Sbjct: 343 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 402

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           LCK     EA  + ++M   G IP+  T+ ++I    +    D+A   L  M+ K
Sbjct: 403 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 170/372 (45%), Gaps = 39/372 (10%)

Query: 65  NNYSYNCLLEALCKS----CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           N  SY  LL  LCK+    C++ L+ M    ++D     +    + ++   C     ++A
Sbjct: 114 NQVSYGTLLNGLCKTGETRCAIKLLRM----IEDRSTRPNVVMYSAIIDGLCKDKLVNEA 169

Query: 121 LSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
             +++E +D   +  +V  ++ L+ AF   G++  A  L+  M   NI  +  TF +LI 
Sbjct: 170 YDLYSE-MDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID 228

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
              K+ +   A Q+F  M + G   +   Y+++I GLCK K+++ A+ L  EM    + P
Sbjct: 229 ALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 286

Query: 239 DFEILSKLITSCSDEGELTL---LVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           D    + LI      G +T    L+ E+    +  DV T T    S++  L  N ++D+A
Sbjct: 287 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT----SLLDALCKNQNLDKA 342

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   M       + G++          P   ++  +I+ L K G+L  A  LF+ +  
Sbjct: 343 TALFMKM------KERGIQ----------PTMYTYTALIDGLCKGGRLKNAQELFQHLLV 386

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC  +V+ Y  +I GLC     +E+  +  +ME++G  P   T   + R L  + +   
Sbjct: 387 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 446

Query: 413 ALNLVRKMRVQG 424
           A  L+ +M  +G
Sbjct: 447 AEKLLHEMIAKG 458



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 5/201 (2%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           + A  +F  + + G+  PN YSYN ++  LCK   VD     L+EM       D  T   
Sbjct: 235 KNAKQIFHAMVQMGV-NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 293

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L+   C SG+   AL++ NE+   G   D   ++ LL A  K   +DKA  L  +M +  
Sbjct: 294 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I+    T+  LI G  K  R+  A +LF  +   G   D   Y V+I GLCK    + AL
Sbjct: 354 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 413

Query: 226 QLYSEMKGSGITPD---FEIL 243
            + S+M+ +G  P+   FEI+
Sbjct: 414 AIKSKMEDNGCIPNAVTFEII 434



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 88/168 (52%), Gaps = 1/168 (0%)

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           ++ +N I+  L K +       L  +M  KG+  ++ T ++LIN +C  G +  +   L 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           ++L K    P+ IT+TTL+ GLC+ G     +   +++  +    N++++  L+ GLCK 
Sbjct: 70  KIL-KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R A+   RM++++  +P++ ++ A+I     +     A+++  EM
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 262/549 (47%), Gaps = 25/549 (4%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E +F  ++ ++ + G  ++A +   RM D  ++   K +  ++   + ++R      ++ 
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M K G   +   Y++++  LCKN +++ A +L  EM   G  PD    + LI+S    G
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230

Query: 255 ELTLLVKEIWEDRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMI-KG---------- 302
           +    VKE  E     T ++ + N+++  +    + ++A+ LL  M+ KG          
Sbjct: 231 K----VKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 303 --EPIADVG-VEMLM-----IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
               ++D G VE+ +     +F    SPN  +F  +I      G    AL  +  M + G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + NV  YN L+ GLC+   L ++  +  +ME +G  P   T +++     +  D+ GA 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +   M   G  P V   T ++  LC++    +A+  + +M  E   P+ V ++  I GL
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               RVD A+++F  +   GC P+   YN ++  L K +R  EA  L  +M  +G+  ++
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN +I G+C +G + +A+  L +M+ + +  PD IT   +ID  C  G+ + AI L +
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGT-KPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            +      P+ I + +LI+G+C       A+V+ R M  +G+ P++  +  L+    S +
Sbjct: 586 RLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645

Query: 655 NPPLAFEVL 663
               A + L
Sbjct: 646 GHSGAVQFL 654



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 58/497 (11%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           N ++  +K++G+  PN ++YN LL+ALCK+  VD     L EM   G   D+ + T L+ 
Sbjct: 166 NPIYSNMKKDGM-EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224

Query: 110 VYCNSGQ------------------------------FDKALSVFNEIIDHGWVDEHV-- 137
             C  G+                              F++A  + +E+++ G +D +V  
Sbjct: 225 SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG-IDPNVIS 283

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++ A S  G V+ +  ++ +M       N  TF  LI GF  K    +AL  +D+M 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G   +   Y+ ++ GLC  + L  A+ ++++M+ +G  P+    S LI   +  G+L 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 258 LLVKEIW-----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
               E+W          N +   C  ++ +L  N   +QAY L++ M          VE 
Sbjct: 404 -GASEVWNWMITHGCHPNVVAYTC--MVDVLCRNSMFNQAYCLIENM---------QVE- 450

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    PNT +F+  I  L   G++D A+ +F +M   GC  N   YN L+D L   
Sbjct: 451 ------NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R  E++ L+++ME  G +    T N++    C    +  AL L+ KM V+G +P     
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++I   CK GK   A + +  +    + PDI+ Y++ I G+     V+ A+   R + +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624

Query: 493 HGCCPDVVAYNIIISGL 509
            G  P+V  +N+++  L
Sbjct: 625 EGISPNVATWNVLVRHL 641



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 180/382 (47%), Gaps = 41/382 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P    ++ I++ LL + +  +   ++  M + G   NVF YN L+  LC +NR++ ++
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM   G  P   +  ++   LC+    +G +   R++ +    P V     LI  +
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCK----LGKVKEARELAMS-FTPSVPVYNALINGV 256

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           CK     EAF+ L +M+ +G  P+++ Y+  I  L D   V+L+L +   + A GC P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VVAYN ++ GLC  + + +A  +FN+
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   G  P+V TY+ LI+G+ K+G++D A    + M+      P+V+ YT ++D LC   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI-THGCHPNVVAYTCMVDVLCRNS 435

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             + A  L   M+ + C PN +TF   I GLC   R   A+  F  M   G  P+   + 
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYN 495

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L+ + L +     AF ++K+M
Sbjct: 496 ELLDSLLKDRRFGEAFGLVKDM 517



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 57/419 (13%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  L D++  +G+  PN  SY  ++ AL  + +V+L    L +M   G   + +T T 
Sbjct: 263 EEAFQLLDEMMNKGI-DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 107 LLQVY-----------------------------------CNSGQFDKALSVFNEIIDHG 131
           L++ +                                   C+      A+SVFN++  +G
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 132 WV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              +   +S L+  ++K G++D A E+   M       N   +  ++    + S  ++A 
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L + M       +   ++  I GLC + +++ A++++ +M  SG  P+    ++L+ S 
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 251 SDE---GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             +   GE   LVK++ E R +    +  N+I+      G + +A  LL  M+       
Sbjct: 502 LKDRRFGEAFGLVKDM-EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV------- 553

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +GT  P+  + +I+I+   K GK+++A+ L   ++      ++  Y +LI 
Sbjct: 554 --------VRGT-KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           G+C    +EE+   LR M   G  P   T N + R L       GA+  +  +   G E
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 220/499 (44%), Gaps = 59/499 (11%)

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
           L  + F  L  G+     ++K+++   +M     A  A+ Y+ +I    K    + AL +
Sbjct: 52  LQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV 111

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           Y  M  SG+ PD                                 T   N +M       
Sbjct: 112 YRVMGQSGLRPD---------------------------------TYTFNVLMNAFKKAK 138

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D  + L + M                     SPN  ++ I+I+ + K G ++ AL +F
Sbjct: 139 RVDSVWKLFEEMQNQ----------------NCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M   GC  N+F Y ++IDGL  S  +++++ L  EM   G   T    NS+   L R 
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                A  L R+M  +G +P     T L+  L   G+A EA R   +    G   D+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I  L   KR+D A E+F ++   G  PDV  +N ++ GLCK+ R+ +A  L  +M  
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  P V  YN LI+G  KSG +++A   L  M +     PDV+TY TLID  C  GR +
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM-QSLGYEPDVVTYNTLIDESCKGGRIE 421

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG----MKPDMFVF 643
           DA+ L+ E+  KG A N +T+  ++ GLC   R   A   F  MK++     + PD   +
Sbjct: 422 DALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTY 480

Query: 644 VALIS----AFLSELNPPL 658
             L++    A LSEL   L
Sbjct: 481 TTLLNGARQAGLSELANSL 499



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 225/482 (46%), Gaps = 29/482 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKR-E 59
           +  +L  ARR      +  +V KSR  + P     L R   S GL+E++    + +KR E
Sbjct: 25  LVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKS---VEALKRME 81

Query: 60  G-LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           G  C     +YN L++A  K+          + M   G   D YT   L+  +  + + D
Sbjct: 82  GHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVD 141

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
               +F E+ +       + +SIL+ A  K G V+KA ++   M     R N  T+  +I
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K   VDKA  LF++MT  G  +   +Y+ +I GL ++ + + A +L+ EM   G+ 
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNL 295
           PD    + L+      G  +   +   E RDV       L N ++  L  +  +D+A+ +
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                 GE   D            + P+  +F+ +++ L K G++  A  L  +M + GC
Sbjct: 322 F-----GELEED-----------GLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V +YN LIDGL  S R+EE+ +LL EM+  G++P   T N++    C+   +  AL 
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE---GFL-PDIVCYSAAI 471
           L  ++  +G    V +NT+L   LC  G+  EA++    M QE   G + PD V Y+  +
Sbjct: 426 LFEEISAKGFANTVTYNTIL-NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484

Query: 472 GG 473
            G
Sbjct: 485 NG 486



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 3/330 (0%)

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G L+ ++   + M    C      YN+LID    +   +++  + R M +SG +P  +T 
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N +     + + V     L  +M+ Q   P V   ++LI  +CK G   +A +   DM  
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P+I  Y++ I GL     VD A  LF ++ + G     V YN +I GL ++ R   
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTL 576
           A  LF EM++KGL P   T+  L+ G   +G   +A         ++ G + DV  Y  L
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA--RDVGCALDVNLYNVL 305

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID LC + R D+A  ++ E+EE G  P+  TF AL+ GLCK  R   A +    MK  G 
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD+ V+  LI           A ++L EM
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 37/221 (16%)

Query: 482 LALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAE-------------------DL 521
           +A + F+ +    G  P V A   ++  L  A+R  EAE                   +L
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIEL 60

Query: 522 FNEMITKGLIP----------------SVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
                + GL+                 + + YN LI+ + K+G   +A L + R++ +  
Sbjct: 61  ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA-LAVYRVMGQSG 119

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD  T+  L++    A R D    L+ EM+ + C+PN IT+  LI  +CKC     AL
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             F  MK +G +P++F + ++I       +   AF + +EM
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM 220


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 255/593 (43%), Gaps = 57/593 (9%)

Query: 52  LFDQVKREG--LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LF+ + R G  +   N Y    L+   C    +DL           GW     TL  L++
Sbjct: 78  LFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIK 137

Query: 110 VYCNSGQFDKALS-VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD---DC 164
             C+  + D A+  VF  + + G+  D   ++ L+       +  +A EL+  M      
Sbjct: 138 GLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGY 197

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N   N  ++  +I GF K+  VDKA  LFD+M   GF  D   Y  +I GLCK + +  A
Sbjct: 198 NCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKA 257

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
             +   M   G+ P                               NT T   N ++R   
Sbjct: 258 EAILQHMFDKGVMP-------------------------------NTRTY--NIMIRGYC 284

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           S G +++A  LL+ M      +  G++          P+  ++ ++I    K G+   A 
Sbjct: 285 SLGQLEEAVRLLKKM------SGSGLQ----------PDVVTYILLIQYYCKIGRCAEAR 328

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           S+F  M + G   N  +Y+ L+ G      L +  +LL  M   G    H   N +    
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +   V  A+    +MR  G  P V   + +I  LCK G+  +A      MV EG  P+I
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + +++ I GL  I       EL  ++   G  PD +  N I+  LCK  RV EA+D F+ 
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 508

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +I  G+ P+V +YN LI+G+C  G +D+++    RM+      PD  TY  L++G    G
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSI-GLRPDSWTYNALLNGYFKNG 567

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           R +DA+ L+ EM  K      IT   ++ GL +  R  AA   +  M ++G +
Sbjct: 568 RVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 275/576 (47%), Gaps = 38/576 (6%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGW--GYDKYTLTP 106
           +M+F ++   G   P+ +SYN L++ LC +  S + +E+ L    D G+    +  + + 
Sbjct: 150 DMVFRRMPELGY-TPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYST 208

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  +   G+ DKA  +F+E+I  G+  + V +S L+    K   ++KA  +++ M D  
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N +T+ ++I G+    ++++A++L  KM+ SG   D   Y ++I   CK  +   A 
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELT-------LLVKE--IWEDRDVNTMTLLC 276
            ++  M   G  P+  I   L+   + +G L        L++++   +E R  N   L+C
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI--LIC 386

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
                    +G++D+A      M                 +  + P+  S+  +I+ L K
Sbjct: 387 -----AYAKHGAVDKAMTAFTEM----------------RQNGLRPDVVSYSTVIHILCK 425

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+++ A+  F +M   G   N+  + +LI GLC+    ++  EL  EM   G  P    
Sbjct: 426 IGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           +N++   LC+   VV A +    +   G +P V     LI   C  GK  E+ +    MV
Sbjct: 486 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD   Y+A + G     RV+ AL L+R++         +  NII+ GL +A R+ 
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIV 605

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +L+ +M+ +G    + TYN ++ G C++  +D+A+     +  KE    DV T+  +
Sbjct: 606 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF-ELDVWTFNIV 664

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           I+ L   GR D+A  L++ M  +G  P+ IT+  +I
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI 700



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 235/532 (44%), Gaps = 35/532 (6%)

Query: 120 ALSVFNEIIDHG----WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           A+S+FN +   G      + ++  IL+  F   G +D A            R+   T   
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 176 LIHGFVKKSRVDKALQL-FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           LI G     R D A+ + F +M + G+  D   Y+ +I GLC  K+ + AL+L   M   
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 235 G---ITPDFEILSKLITSCSDEGELT---LLVKEIWED---RDVNTMTLLCNSIMRILVS 285
           G    +P+    S +I     EGE+     L  E+       DV T + L + + +    
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKA--- 251

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                      QAM K E I      +  +F   V PNT +++I+I      G+L+ A+ 
Sbjct: 252 -----------QAMNKAEAI------LQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVR 294

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L ++M+  G   +V  Y  LI   C   R  E+  +   M   G KP     + +     
Sbjct: 295 LLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 354

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            +  ++   +L+  M   G     +   +LI    KHG   +A    T+M Q G  PD+V
Sbjct: 355 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 414

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            YS  I  L  I RV+ A+  F  + + G  P+++++  +I GLC      + E+L  EM
Sbjct: 415 SYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 474

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           I +G+ P     N +++  CK G + +A      M+      P+V++Y TLIDG C  G+
Sbjct: 475 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD-MVIHIGVKPNVVSYNTLIDGYCFVGK 533

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            D++I  ++ M   G  P+  T+ AL+ G  K  R   AL  +R M  K +K
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 235/504 (46%), Gaps = 19/504 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +PN  +YN ++   C    ++     LK+M   G   D  T   L+Q YC  G+  +A S
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARS 329

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           VF+ ++  G   +  ++ ILL  ++  G +    +L++ M    I    + F +LI  + 
Sbjct: 330 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 389

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   VDKA+  F +M ++G   D   Y  +I  LCK  ++E A+  +++M   G++P+  
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI      GE   + +  +E  +R ++   +  N+IM  L   G + +A +    +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I       +GV+          PN  S++ +I+     GK+D ++  F  M  IG   + 
Sbjct: 510 IH------IGVK----------PNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + YN L++G   + R+E++  L REM     K    T N +   L +   +V A  L  K
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMK 613

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +  ++    ++  LC++    EA R   D+  + F  D+  ++  I  L+ + R
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A  LF  +   G  P V+ Y+++I    +   + E++DLF  M   G        N+
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNV 733

Query: 540 LINGWCKSGNIDQAMLCLSRMLEK 563
           +I    + G++ +A   L+++ EK
Sbjct: 734 IIRRLLEKGDVRRAGTYLTKIDEK 757



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 248/596 (41%), Gaps = 94/596 (15%)

Query: 118 DKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK-------ACELIERMDDCNIRL- 168
           + AL++F+E++        H F+ +L   ++             A  L   M    + + 
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 169 --NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N     +LI  F    R+D A   F    K G+       + +I GLC  K+ + A+ 
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 227 L-YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           + +  M   G TPD                                     N++++ L  
Sbjct: 151 MVFRRMPELGYTPD---------------------------------VFSYNALIKGLCV 177

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
                +A  LL  M      AD G           SPN  S+  II+   K+G++D A  
Sbjct: 178 EKKSQEALELLLHMT-----ADGGY--------NCSPNVVSYSTIIDGFFKEGEVDKAYF 224

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EM   G   +V  Y++LIDGLC +  + ++  +L+ M + G  P   T N M R  C
Sbjct: 225 LFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYC 284

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               +  A+ L++KM   G +P V    LLI+  CK G+  EA      MV++G  P+  
Sbjct: 285 SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 344

Query: 466 CYS------AAIGGLIDIK-----------------------------RVDLALELFRDI 490
            Y       A  G LID++                              VD A+  F ++
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +G  PDVV+Y+ +I  LCK  RV +A   FN+M+++GL P++ ++  LI+G C  G  
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +       M+ +    PD I   T++D LC  GR  +A   ++ +   G  PN +++  
Sbjct: 465 KKVEELAFEMINR-GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNT 523

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI G C   +   ++  F  M   G++PD + + AL++ +        A  + +EM
Sbjct: 524 LIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREM 579



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/507 (23%), Positives = 210/507 (41%), Gaps = 49/507 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+    +G   EA  +FD + R+G   PN+  Y+ LL       ++  V   L  M  
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
            G  ++      L+  Y   G  DKA++ F E+  +G                       
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG----------------------- 408

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
                      +R +  ++  +IH   K  RV+ A+  F++M   G + +   +  +I G
Sbjct: 409 -----------LRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 457

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   + +   +L  EM   GI PD   ++ ++ +   EG +        E +D   M +
Sbjct: 458 LCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV-------EAQDFFDMVI 510

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                  ++  N  ID  Y  +  M +     D  V +       + P++ +++ ++N  
Sbjct: 511 HIGVKPNVVSYNTLID-GYCFVGKMDESIKQFDRMVSI------GLRPDSWTYNALLNGY 563

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K+G+++ AL+L+REM +          N ++ GL  + R+  + EL  +M + G +   
Sbjct: 564 FKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRI 623

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N++   LC    V  AL +   +R +  E  V    ++I  L K G+  EA    + 
Sbjct: 624 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSA 683

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV  G +P ++ YS  I   I+   ++ + +LF  +  +GC  D    N+II  L +   
Sbjct: 684 MVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGD 743

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLI 541
           V  A     ++  K      +T  LLI
Sbjct: 744 VRRAGTYLTKIDEKNFSVEASTAALLI 770


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 262/549 (47%), Gaps = 25/549 (4%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E +F  ++ ++ + G  ++A +   RM D  ++   K +  ++   + ++R      ++ 
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M K G   +   Y++++  LCKN +++ A +L  EM   G  PD    + LI+S    G
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230

Query: 255 ELTLLVKEIWEDRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMI-KG---------- 302
           +    VKE  E     T ++ + N+++  +    + ++A+ LL  M+ KG          
Sbjct: 231 K----VKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 303 --EPIADVG-VEMLM-----IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
               ++D G VE+ +     +F    SPN  +F  +I      G    AL  +  M + G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + NV  YN L+ GLC+   L ++  +  +ME +G  P   T +++     +  D+ GA 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +   M   G  P V   T ++  LC++    +A+  + +M  E   P+ V ++  I GL
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               RVD A+++F  +   GC P+   YN ++  L K +R  EA  L  +M  +G+  ++
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TYN +I G+C +G + +A+  L +M+ + +  PD IT   +ID  C  G+ + AI L +
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGT-KPDAITVNIVIDAYCKQGKVNIAIQLMD 585

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            +      P+ I + +LI+G+C       A+V+ R M  +G+ P++  +  L+    S +
Sbjct: 586 RLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645

Query: 655 NPPLAFEVL 663
               A + L
Sbjct: 646 GHSGAVQFL 654



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 58/497 (11%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           N ++  +K++G+  PN ++YN LL+ALCK+  VD     L EM   G   D+ + T L+ 
Sbjct: 166 NPIYSNMKKDGM-EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224

Query: 110 VYCNSGQ------------------------------FDKALSVFNEIIDHGWVDEHV-- 137
             C  G+                              F++A  + +E+++ G +D +V  
Sbjct: 225 SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG-IDPNVIS 283

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++ A S  G V+ +  ++ +M       N  TF  LI GF  K    +AL  +D+M 
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G   +   Y+ ++ GLC  + L  A+ ++++M+ +G  P+    S LI   +  G+L 
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 258 LLVKEIW-----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
               E+W          N +   C  ++ +L  N   +QAY L++ M          VE 
Sbjct: 404 -GASEVWNWMITHGCHPNVVAYTC--MVDVLCRNSMFNQAYCLIENM---------QVE- 450

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    PNT +F+  I  L   G++D A+ +F +M   GC  N   YN L+D L   
Sbjct: 451 ------NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R  E++ L+++ME  G +    T N++    C    +  AL L+ KM V+G +P     
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++I   CK GK   A + +  +    + PDI+ Y++ I G+     V+ A+   R + +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624

Query: 493 HGCCPDVVAYNIIISGL 509
            G  P+V  +N+++  L
Sbjct: 625 EGISPNVATWNVLVRHL 641



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 180/382 (47%), Gaps = 41/382 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P    ++ I++ LL + +  +   ++  M + G   NVF YN L+  LC +NR++ ++
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM   G  P   +  ++   LC+    +G +   R++ +    P V     LI  +
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCK----LGKVKEARELAMS-FTPSVPVYNALINGV 256

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD- 498
           CK     EAF+ L +M+ +G  P+++ Y+  I  L D   V+L+L +   + A GC P+ 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 499 ----------------------------------VVAYNIIISGLCKAQRVAEAEDLFNE 524
                                             VVAYN ++ GLC  + + +A  +FN+
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   G  P+V TY+ LI+G+ K+G++D A    + M+      P+V+ YT ++D LC   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI-THGCHPNVVAYTCMVDVLCRNS 435

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             + A  L   M+ + C PN +TF   I GLC   R   A+  F  M   G  P+   + 
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYN 495

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            L+ + L +     AF ++K+M
Sbjct: 496 ELLDSLLKDRRFGEAFGLVKDM 517


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 242/536 (45%), Gaps = 27/536 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF  L  A  + G +++A E   +M    +    ++   L+H   K  R D + + F  M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G       Y+++I  LCK   LEMA  L+++MK +G TPD    + LI      G+L
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG---HGKL 303

Query: 257 TLL-----VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
            LL     + E  +D D +   +  N+++        + +A+  L  M            
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN--------- 354

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                   + PN  ++   I+   K+G L  A+  F +M ++    N F Y +LID  C 
Sbjct: 355 -------GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +  L E+ +L+ E+ ++G K    T  ++   LC    +  A  + R M   G  P  + 
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T L+    K  +   A   L +M ++   PD++ Y   + GL +  R++ A  L  +I 
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G   + V Y  ++    K+ +  EA  L  EM+  GLI +  TY  LI+G CKSG + 
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587

Query: 552 QAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           +AM    RM   E G  P+V  YT L+DGLC     + A  L++EM +KG  P++I + A
Sbjct: 588 EAMHHFGRM--SEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI G  K    + AL     M E GM+ D+  + ALI           A  +L EM
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 701



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 164/623 (26%), Positives = 271/623 (43%), Gaps = 64/623 (10%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
             ++ C    G    L   L  +G++EEA+  F ++ R+    P   S N LL  L K  
Sbjct: 176 ATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM-RKFRVFPKPRSCNALLHRLSKVG 234

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
             DL     K+M   G     +T   ++   C  G  + A S+F ++ + G+  + V ++
Sbjct: 235 RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 294

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+    K G +D+   + E+M D +   +  T+  LI+ F K  R+ KA +   +M  +
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT-- 257
           G   +   Y   I   CK   L+ A++ + +M+   +TP+    + LI +    G L   
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414

Query: 258 -LLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             LV+EI +     +V T T L +     L   G + +A  + +AM+             
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDG----LCEEGRMKEAEEVFRAMLNA----------- 459

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                 V+PN  ++  +++  +K  +++ A  + +EM +     ++ LY  ++ GLCN +
Sbjct: 460 -----GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RLEE+  L+ E++ESG                                           T
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIY-----------------------------------T 539

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            L+    K G+A EA   L +M+  G +   V Y A I GL     V  A+  F  +   
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEI 599

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+V  Y  ++ GLCK      A+ LF+EM+ KG++P    Y  LI+G  K GN+ +A
Sbjct: 600 GLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 659

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +    RM+E      D+  YT LI GL  +G+   A  L +EM  KG  P+ + +M LI 
Sbjct: 660 LNLRDRMIEI-GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718

Query: 614 GLCKCDRPRAALVHFRMMKEKGM 636
                 +   AL     M ++GM
Sbjct: 719 KYYALGKVDEALELQNEMAKRGM 741



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 215/503 (42%), Gaps = 51/503 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G +GL++E   +F+Q+K +  C P+  +YN L+   CK   +      L EM+  
Sbjct: 296 LIDGHGKLGLLDECICIFEQMK-DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T +  +  +C  G   +A+  F ++       +E  ++ L+ A  K G + +A
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 414

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E +    I+LN  T+  L+ G  ++ R+ +A ++F  M  +G A +   Y  ++ G
Sbjct: 415 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 474

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             K K++E A  +  EMK   I PD                                  L
Sbjct: 475 FIKAKEMEYAKDILKEMKEKCIKPDL---------------------------------L 501

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L  +I+  L +   +++A  LL   IK               +  ++ N   +  +++  
Sbjct: 502 LYGTILWGLCNESRLEEA-KLLIGEIK---------------ESGINTNAVIYTTLMDAY 545

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G+   AL+L  EM  +G +     Y  LIDGLC S  ++E+      M E G +P  
Sbjct: 546 FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
               ++   LC+      A  L  +M  +G  P     T LI    KHG   EA      
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M++ G   D+  Y+A I GL    +V  A  L  ++   G  PD V Y  +I       +
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGK 725

Query: 515 VAEAEDLFNEMITKGLIPSVATY 537
           V EA +L NEM  +G+I  ++ +
Sbjct: 726 VDEALELQNEMAKRGMITGLSDH 748



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 9/320 (2%)

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           T+  C+    +++ L   L     LEE+ E   +M +    P   + N+    L  R   
Sbjct: 177 TRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNA----LLHRLSK 232

Query: 411 VGALNLVRK----MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
           VG  +L RK    M   G +  V    ++I  LCK G    A    T M + GF PDIV 
Sbjct: 233 VGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVT 292

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y++ I G   +  +D  + +F  +    C PDV+ YN +I+  CK +R+ +A +  +EM 
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 352

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             GL P+V TY+  I+ +CK G + +A+     M  + + +P+  TYT+LID  C AG  
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM-RRVALTPNEFTYTSLIDANCKAGNL 411

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +A+ L  E+ + G   N +T+ AL+ GLC+  R + A   FR M   G+ P+   + AL
Sbjct: 412 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 471

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           +  F+       A ++LKEM
Sbjct: 472 VHGFIKAKEMEYAKDILKEM 491



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 164/350 (46%), Gaps = 2/350 (0%)

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
           P  DV  ++L   +    P    FD + + L++ G L+ A   F +M +          N
Sbjct: 166 PSWDV-FDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCN 224

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+  L    R + S +  ++M  +G K + FT N M   LC+  D+  A +L  +M+  
Sbjct: 225 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 284

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +     LI    K G   E       M      PD++ Y+A I      +R+  A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            E   ++ A+G  P+VV Y+  I   CK   + EA   F +M    L P+  TY  LI+ 
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK+GN+ +A+  +  +L+      +V+TYT L+DGLC  GR  +A  ++  M   G AP
Sbjct: 405 NCKAGNLAEALKLVEEILQA-GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           N+ T+ AL+ G  K      A    + MKEK +KPD+ ++  ++    +E
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 183/332 (55%), Gaps = 1/332 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  ++  A+SL  +M +IG   ++  YN +ID LC + R+ ++++ 
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            +E+E  G +P   T  ++   LC       A  L+  M  +   P V   + L+    K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +GK +EA     +MV+    PDIV YS+ + GL    R+D A ++F  + + GC  DVV+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS 332

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CKA+RV +   LF EM  +GL+ +  TYN LI G+ ++G++D+A    S+M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM- 391

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD+ TY  L+ GLC  G  + A++++ +M+++    + +T+  +I G+CK  + 
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A   F  +  KG+KPD+  +  ++S   ++
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 178/334 (53%), Gaps = 1/334 (0%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           T L+D KL+ A+ LF +M +     ++  +N L+  +    + +    L ++ME  G + 
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N +  C C    V  AL+++ KM   G+EP       L+   C+  +  +A   +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV+ G+ PDIV Y+A I  L   KRV+ A + F++I   G  P+VV Y  +++GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R ++A  L ++MI K + P+V TY+ L++ + K+G + +A      M+ + S  PD++T
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVT 297

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++L++GLC+  R D+A  +++ M  KGC  + +++  LI G CK  R    +  FR M 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++G+  +   +  LI  F    +   A E   +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 176/322 (54%), Gaps = 1/322 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+I+IN      ++ LALS+  +M ++G   +     +L++G C  NR+ ++  L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G+KP     N++   LC+ + V  A +  +++  +G  P V   T L+  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A R L+DM+++   P+++ YSA +   +   +V  A ELF ++      PD+V Y+ +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ++GLC   R+ EA  +F+ M++KG +  V +YN LING+CK+  ++  M  L R + +  
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK-LFREMSQRG 360

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              + +TY TLI G   AG  D A   +++M+  G +P+  T+  L+ GLC       AL
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 626 VHFRMMKEKGMKPDMFVFVALI 647
           V F  M+++ M  D+  +  +I
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVI 442



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 183/362 (50%), Gaps = 17/362 (4%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           ++ A +L   M+K  P                 P+   F+ +++ ++K  K D+ +SL +
Sbjct: 66  LNDAIDLFSDMVKSRPF----------------PSIVDFNRLLSAIVKLKKYDVVISLGK 109

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M  +G   +++ +N +I+  C   ++  +  +L +M + G++P   T+ S+    CRR 
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A++LV KM   G++P +     +I  LCK  +  +AF F  ++ ++G  P++V Y+
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A + GL +  R   A  L  D+      P+V+ Y+ ++    K  +V EA++LF EM+  
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            + P + TY+ L+NG C    ID+A      M+ K     DV++Y TLI+G C A R +D
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVED 348

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            + L+ EM ++G   N +T+  LI G  +      A   F  M   G+ PD++ +  L+ 
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408

Query: 649 AF 650
             
Sbjct: 409 GL 410



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 220/501 (43%), Gaps = 58/501 (11%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  + L +  ++  D VK      P+   +N LL A+ K    D+V    K+M+  G   
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D YT   ++  +C   Q   ALS+  +++  G+  + V                      
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV---------------------- 156

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       T   L++GF +++RV  A+ L DKM + G+  D   Y+ II  LCK K
Sbjct: 157 ------------TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLL 275
           ++  A   + E++  GI P+    + L+    +    +    LL   I +    N +T  
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY- 263

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            ++++   V NG + +A  L + M++                 ++ P+  ++  ++N L 
Sbjct: 264 -SALLDAFVKNGKVLEAKELFEEMVRM----------------SIDPDIVTYSSLVNGLC 306

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
              ++D A  +F  M   GC+ +V  YN LI+G C + R+E+  +L REM + G      
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++ +   +  DV  A     +M   G  P +    +L+  LC +G+  +A     DM
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +     DIV Y+  I G+    +V+ A  LF  +   G  PD+V Y  ++SGLC    +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486

Query: 516 AEAEDLFNEMITKGLIPSVAT 536
            E E L+ +M  +GL+ +  T
Sbjct: 487 HEVEALYTKMKQEGLMKNDCT 507



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 215/453 (47%), Gaps = 23/453 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + + A+ +F++++        V F+ LL A  K  + D    L ++M+   IR +  TF 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I+ F    +V  AL +  KM K G+  D      ++ G C+  ++  A+ L  +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 235 GITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G  PD    + +I S C  +   +     KEI E + +    +   +++  L ++     
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  MIK +                ++PN  ++  +++  +K+GK+  A  LF EM 
Sbjct: 244 AARLLSDMIKKK----------------ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           ++    ++  Y++L++GLC  +R++E+ ++   M   G      + N++    C+ + V 
Sbjct: 288 RMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347

Query: 412 GALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             + L R+M  +G     V +NT LI+   + G   +A  F + M   G  PDI  Y+  
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNT-LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +GGL D   ++ AL +F D+       D+V Y  +I G+CK  +V EA  LF  +  KGL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            P + TY  +++G C  G + +     ++M ++
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 189/444 (42%), Gaps = 31/444 (6%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  L+   VK  + D  + L  KM   G  +D   ++++I   C   Q+ +AL +  +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 233 GSGITPDFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
             G  PD   +  L+         SD   L   + EI    D+    +  N+I+  L   
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI----VAYNAIIDSLCKT 203

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
             ++ A++  +                 I +  + PN  ++  ++N L    +   A  L
Sbjct: 204 KRVNDAFDFFKE----------------IERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +M +     NV  Y+ L+D    + ++ E+ EL  EM      P   T +S+   LC 
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  +   M  +G    V     LI   CK  +  +  +   +M Q G + + V 
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I G      VD A E F  +   G  PD+  YNI++ GLC    + +A  +F +M 
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQA--MLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
            + +   + TY  +I G CK+G +++A  + C    L  +   PD++TYTT++ GLC  G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC---SLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
              +   L+ +M+++G   N  T 
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +G L+        V +A  L D++   G   P+  +YN ++++LCK+  V+      KE
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           ++  G   +  T T L+   CNS ++  A  + +++I        + +S LL AF K G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A EL E M   +I  +  T+  L++G     R+D+A Q+FD M   G  +D   Y+ 
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD-- 268
           +I G CK K++E  ++L+ EM   G+  +    + LI      G++    +E +   D  
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK-AQEFFSQMDFF 394

Query: 269 -VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            ++      N ++  L  NG +++A  + + M K E   D+                 ++
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI----------------VTY 438

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I  + K GK++ A SLF  ++  G   ++  Y  ++ GLC    L E   L  +M++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
            G      TL+          D+  +  L++KM   G+ P
Sbjct: 499 EGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAP 530


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 255/548 (46%), Gaps = 36/548 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  +YN +L AL  + S+      L  M  +G   + YT   L++  C  G+ ++A+ 
Sbjct: 115 APSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGF 180
           V  ++   G     V ++ L+ AF + GE+D A  ++  M ++ N + N  TF  +++G 
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R++ A ++FD+M + G A D   Y+ ++ G CK   L  +L ++SEM   G+ PD 
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDV 293

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + LI +    G L   V  + + R+     L  N +    + +G   + + L  A++
Sbjct: 294 VTFTSLIHATCKAGNLEQAVALVAQMRERG---LRMNEVTFTALIDGFCKKGF-LDDALL 349

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             E +   G++          P+   ++ +IN   K G++DLA  L REM       +V 
Sbjct: 350 AVEEMRKCGIQ----------PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ +I G C    L+ +++L ++M + G  P   T +S+ R LC  + +  A  L   M
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENM 459

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G +P     T LI   CK G   +A     +M+++G LPD+V YS  I GL    R 
Sbjct: 460 LQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSART 519

Query: 481 DLALELFRDICAHGCCPDVVAYNII---------------ISGLCKAQRVAEAEDLFNEM 525
             A  L   +      PD + Y+ +               + G C    + EA+ ++  M
Sbjct: 520 KEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG- 584
           + +      + Y++LI+G C+ GN+ +A+    +ML +   SP+  +  +L+ GL   G 
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML-RSGFSPNSTSTISLVRGLFEEGM 638

Query: 585 --RPDDAI 590
               D+AI
Sbjct: 639 VVEADNAI 646



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 233/496 (46%), Gaps = 35/496 (7%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +    M + G A +   Y++++  LC   +LE A+ +  +M+G+G  P+    + L+ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 249 SCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +    GEL     +V  + E+ +     +  NS++  L   G ++ A  +   M++    
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE--- 252

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         ++P+  S++ +++   K G L  +L++F EMTQ G + +V  + +L
Sbjct: 253 -------------GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I   C +  LE++  L+ +M E G +    T  ++    C++  +  AL  V +MR  G 
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +P V     LI   CK G+   A   + +M  +   PD+V YS  I G   +  +D A +
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L + +   G  PD + Y+ +I GLC+ +R+ +A +LF  M+  G+ P   TY  LI+G C
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K GN+++A+     M+ K    PDV+TY+ LI+GL  + R  +A  L  ++  +   P+ 
Sbjct: 480 KEGNVEKALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 606 ITF---------------MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           I +               +AL+ G C     + A   ++ M ++  K D  V+  LI   
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 651 LSELNPPLAFEVLKEM 666
               N   A    K+M
Sbjct: 599 CRGGNVRKALSFHKQM 614



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 182/376 (48%), Gaps = 2/376 (0%)

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           AYN +   +    +      +  + +  V+PN  +++I++  L   G+L+ A+ +  +M 
Sbjct: 120 AYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDV 410
             GC  N   YN L+   C +  L+ +  ++  M E G  KP   T NSM   LC+   +
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            GA  +  +M  +G  P V     L+   CK G   E+    ++M Q G +PD+V +++ 
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        ++ A+ L   +   G   + V +  +I G CK   + +A     EM   G+
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            PSV  YN LING+CK G +D A   L R +E +   PDV+TY+T+I G C  G  D A 
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARE-LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  +M +KG  P+ IT+ +LI GLC+  R   A   F  M + G++PD F +  LI   
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 651 LSELNPPLAFEVLKEM 666
             E N   A  +  EM
Sbjct: 479 CKEGNVEKALSLHDEM 494



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 229/490 (46%), Gaps = 40/490 (8%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P A+ +  L+      G ++ A  +   ++ EG   PN  ++N ++  LCK+  ++   
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
               EM   G   D  +   LL  YC  G   ++L+VF+E+   G V + V F+ L+ A 
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G +++A  L+ +M +  +R+NE TF  LI GF KK  +D AL   ++M K G     
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEI 263
             Y+ +I G CK  ++++A +L  EM+   + PD    S +I+     G L     + + 
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              + V    +  +S++R L     ++ A  L + M++      +GV+          P+
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ------LGVQ----------PD 467

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +I+   K+G ++ ALSL  EM + G + +V  Y+ LI+GL  S R +E++ LL 
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--------HEPWVKHN--- 432
           ++      P +   +++  C C + +    + L++   ++G        ++  +  N   
Sbjct: 528 KLYHEDPVPDNIKYDALMLC-CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 433 -----TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                ++LI   C+ G   +A  F   M++ GF P+     + + GL +   V  A    
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 488 RDICAHGCCP 497
           +D+    CCP
Sbjct: 647 QDLLT--CCP 654



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 34/207 (16%)

Query: 494 GCCPDVVA----------------------------------YNIIISGLCKAQRVAEAE 519
           G  P V A                                  YNI++  LC   R+ EA 
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  +M   G  P+  TYN L+  +C++G +D A   +S M E+ +  P+++T+ ++++G
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC AGR + A  +++EM  +G AP+ +++  L++G CK      +L  F  M ++G+ PD
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
           +  F +LI A     N   A  ++ +M
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQM 319


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 242/530 (45%), Gaps = 25/530 (4%)

Query: 141  LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKS 199
            L+ A++  G + KA E+ ER+ +    L E T C  L+   V++ R D A +L+D+M   
Sbjct: 913  LVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGK 972

Query: 200  GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGEL 256
               +D     V++ GLC  +++E  L+L     G+G  P     + LI       D G  
Sbjct: 973  DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 1032

Query: 257  TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             LL+ E           +  N  +  LV+ GS      L+  + K   +  +G   L + 
Sbjct: 1033 LLLLGE-----------METNGFLPTLVTYGS------LINWLGKKGDLEKIGSLFLEMR 1075

Query: 317  KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            K   SPN   ++ +I+ L        A+ + ++M   GC  ++  +N LI GLC+   + 
Sbjct: 1076 KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1135

Query: 377  ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            ++   LRE       P   +   +    C R +++ A +L+ +M  +GH P V     LI
Sbjct: 1136 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 1195

Query: 437  KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              L   GK  EA      M +    PD+  Y+  I GL   + +  A  +  ++      
Sbjct: 1196 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1255

Query: 497  PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            PD   Y  +I G  +++ + +A  +F  M  KG+ P + + N +I G+C+ G + +A+LC
Sbjct: 1256 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILC 1315

Query: 557  LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +S M  K    PD  TYTT+I G    G  + A+    +M ++ C PN +T+ +LI G C
Sbjct: 1316 MSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374

Query: 617  KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE---LNPPLAFEVL 663
            K     +A   F  M+ + + P++  +  LI +   +   L   L FE +
Sbjct: 1375 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 1424



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 162/639 (25%), Positives = 281/639 (43%), Gaps = 37/639 (5%)

Query: 33   LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
            LG L+      G++ +A  + ++V+ +   +P     N LL+ L +    D       EM
Sbjct: 910  LGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 969

Query: 93   QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEV 151
                 G D Y+   L++  C   + ++ L +       G +   VF ++L+  + + G++
Sbjct: 970  LGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 1029

Query: 152  DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
             +   L+  M+         T+  LI+   KK  ++K   LF +M K GF+ +  +Y+ +
Sbjct: 1030 GRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSV 1089

Query: 212  IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDV 269
            I  LC  +    A+ +  +M  SG  PD    + LIT    EG +      + E   R++
Sbjct: 1090 IDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 1149

Query: 270  NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            N   L    ++      G +  A +LL             VEM+   +G  +P+  +F  
Sbjct: 1150 NPNQLSYTPLIHGFCMRGELMVASDLL-------------VEMMG--RGH-TPDVVTFGA 1193

Query: 330  IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            +I+ L+  GK+  AL +  +MT+     +V +YN LI GLC    L  +  +L EM E  
Sbjct: 1194 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1253

Query: 390  FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             +P  F   ++     R +++  A  +   M  +G  P +     +IK  C+ G   EA 
Sbjct: 1254 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAI 1313

Query: 450  RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
              +++M + G +PD   Y+  I G      ++ AL    D+    C P+VV Y+ +I+G 
Sbjct: 1314 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 1373

Query: 510  CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            CK      AE LF  M  + L P+V TY +LI    K   + +A L    ML     SP+
Sbjct: 1374 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC-SPN 1432

Query: 570  VITYTTLIDGLC----------------IAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
             +T   L++GL                 + G+ D  ++++ ++      P    + A+I 
Sbjct: 1433 DVTLHYLVNGLTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIF 1491

Query: 614  GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             LC+ +  R AL     M +KG  P+   F++L+  F S
Sbjct: 1492 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 1530



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 1/319 (0%)

Query: 348  REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            R   Q G +  V   N L+  L    R +++ +L  EM        +++   + R LC  
Sbjct: 932  RVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLE 991

Query: 408  QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            + V   L L+      G  P V    +LI   C+ G        L +M   GFLP +V Y
Sbjct: 992  RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTY 1051

Query: 468  SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             + I  L     ++    LF ++   G  P+V  YN +I  LC  +   +A  +  +M  
Sbjct: 1052 GSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFA 1111

Query: 528  KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
             G  P + T+N LI G C  G++ +A   L   + +E  +P+ ++YT LI G C+ G   
Sbjct: 1112 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL-NPNQLSYTPLIHGFCMRGELM 1170

Query: 588  DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             A  L  EM  +G  P+ +TF ALI GL    +   AL+    M E+ + PD+ ++  LI
Sbjct: 1171 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1230

Query: 648  SAFLSELNPPLAFEVLKEM 666
            S    +   P A  +L+EM
Sbjct: 1231 SGLCKKRMLPAAKNILEEM 1249



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 220/551 (39%), Gaps = 40/551 (7%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+R L     VEE   L +     G C+P+   YN L++  C+   +    + L EM+  
Sbjct: 984  LVRGLCLERRVEEGLKLIEARWGAG-CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETN 1042

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
            G+     T   L+      G  +K  S+F E+   G+     +++ ++ A        +A
Sbjct: 1043 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQA 1102

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              ++++M       +  TF  LI G   +  V KA     +  +     +   Y  +I G
Sbjct: 1103 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1162

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
             C   +L +A  L  EM G G TPD      LI      G+++  L+V+E   +R V   
Sbjct: 1163 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1222

Query: 273  TLLCNSIMRILVSNGSIDQAYNLLQAM-------------------IKGEPIADV-GVEM 312
              + N ++  L     +  A N+L+ M                   I+ E + D   +  
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282

Query: 313  LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
             M  KG V P+  S + +I    + G +  A+     M ++GC+ + F Y  +I G    
Sbjct: 1283 FMEHKG-VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341

Query: 373  NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
              L  +   L +M +   KP   T +S+    C+  D   A  L   M+ +   P V   
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401

Query: 433  TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI---------------DI 477
            T+LI  L K  K + A  +   M+     P+ V     + GL                ++
Sbjct: 1402 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 1461

Query: 478  KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
               D  L +F+ +      P   AYN II  LC+   + EA D  N M  KG +P+  T+
Sbjct: 1462 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1521

Query: 538  NLLINGWCKSG 548
              L+ G+C  G
Sbjct: 1522 LSLLYGFCSVG 1532



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 2/288 (0%)

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKE 438
            + L+ M  +G  PT   L ++         +  A  +  ++R Q G  P V H   L+K 
Sbjct: 893  DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKL 952

Query: 439  LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            L +  +  +A +   +M+ +    D       + GL   +RV+  L+L       GC P 
Sbjct: 953  LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1012

Query: 499  VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            VV YN++I G C+   +     L  EM T G +P++ TY  LIN   K G++++ +  L 
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK-IGSLF 1071

Query: 559  RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
              + K   SP+V  Y ++ID LC       A+++  +M   GC P+ ITF  LITGLC  
Sbjct: 1072 LEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 1131

Query: 619  DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               R A    R    + + P+   +  LI  F       +A ++L EM
Sbjct: 1132 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1179



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 51/132 (38%)

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            +D    M   G  P+ A    L+  +  +G + +A     R+ E+    P+V     L+ 
Sbjct: 892  DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLK 951

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
             L    R DDA  L++EM  K    +  +   L+ GLC   R    L         G  P
Sbjct: 952  LLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIP 1011

Query: 639  DMFVFVALISAF 650
             +  +  LI  +
Sbjct: 1012 HVVFYNVLIDGY 1023


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 260/568 (45%), Gaps = 31/568 (5%)

Query: 115 GQFDKALSVFNEIIDHGW---VDEHVFSILLVAFSKWGEVDKACELIERM--DDCNIRLN 169
           G  D+AL+ F+ +  H     V   + ++LL    K G VD A  +++ M   +   R N
Sbjct: 20  GMVDEALAAFSTLDSHAKNTNVRNEIINLLL----KSGRVDNAMNVLDEMLLPESEFRPN 75

Query: 170 EKTFCVLIHGFVK------KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           +KT  ++ +  +K      + + D+   L  K  K     D      +I  LC++    +
Sbjct: 76  DKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNL 135

Query: 224 ALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           A  +   +       D    + L+T      + G++ LL++++ +D ++    +    ++
Sbjct: 136 AWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKM-KDMNIQPTVITFGILI 194

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L     ID A  + + M KGE       E   +F   V+P+T  ++ +I+ L K G+ 
Sbjct: 195 NHLCKFRRIDDALEVFEKM-KGEK------EETKVF---VAPDTIMYNTLIDGLCKVGRQ 244

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + AL L  +M    C      +N LI+G C S  +E +++L  EME +  +P   TLN++
Sbjct: 245 EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              +C+   +  A+   R M+ +G +      T+ I   C      +A  FL +M ++G 
Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC 364

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            PD V Y   I GL    R+D A  +   +   G C D V YN++IS  CK  ++  A++
Sbjct: 365 FPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQE 424

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
             NEM   G+ P   TYN LI+ + K GN   A   + +M E+E  SP V TY  LI   
Sbjct: 425 WLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAY 484

Query: 581 CIAGRPDDAIMLWNEMEE--KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           C+    D+AI ++ EM        PN + +  LI  LCK  +   AL     MK +G+ P
Sbjct: 485 CLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMP 544

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   + ++  A   +     AF+++  M
Sbjct: 545 NTTTYNSIFKALRDKNWLDKAFKLMDRM 572



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 262/572 (45%), Gaps = 44/572 (7%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +I  L   G V+ A N+L + +  E    PN+ +   +   L K   +D +E R+KE + 
Sbjct: 45  IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLK---IDGLEGRVKEDEI 101

Query: 95  YG----WGY-----DKYTLTPLLQVYCNSGQFDKALSVF-NEIIDHGWVDEHVFSILLVA 144
            G    +G      D   LT L+   C SG  + A ++  N ++ +G  D    + LL  
Sbjct: 102 AGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTG 161

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM------TK 198
             K  E  K   L+ +M D NI+    TF +LI+   K  R+D AL++F+KM      TK
Sbjct: 162 LGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETK 221

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
              A D  MY+ +I GLCK  + E AL L  +M+     P     + LI      GE+ +
Sbjct: 222 VFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEV 281

Query: 259 LVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             K     E+  +    +  N+++  +  +  I  A    + M +               
Sbjct: 282 AHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQ--------------- 326

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           KG +  N  ++ + IN       ++ A+    EM++ GC  +  +Y  LI GL  + RL+
Sbjct: 327 KG-LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLD 385

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLL 435
           ++  ++ +++E+GF       N +    C++  +  A   + +M + G +P  V +NTL 
Sbjct: 386 DASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTL- 444

Query: 436 IKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--CA 492
           I    K G    A +F+  M +E G  P +  Y A I        +D A+++F+++   A
Sbjct: 445 ISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVA 504

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P+ V YNI+I  LCK  +V  A  L ++M  +G++P+  TYN +         +D+
Sbjct: 505 SKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDK 564

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           A   + RM+E ++ +PD IT   L + L   G
Sbjct: 565 AFKLMDRMVE-QACNPDYITMEILTEWLSAVG 595



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 21/381 (5%)

Query: 23  KSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +++ F++P  + +  LI  L  VG  EEA  L  ++ R   C P   ++NCL+   C+S 
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKM-RSDQCAPTTATFNCLINGYCRSG 277

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
            +++      EM++     +  TL  L+   C   +   A+  F  +   G    +V ++
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYT 337

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           + + AF     ++KA E ++ M       +   +  LI G  +  R+D A  +  K+ ++
Sbjct: 338 VFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL- 258
           GF  D   Y+V+I   CK  +L+ A +  +EM+ +G+ PD    + LI+  S  G   L 
Sbjct: 398 GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLA 457

Query: 259 --LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
              +K++ E+  ++       +++     N +ID+A  + + M                 
Sbjct: 458 HKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNN--------------V 503

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              V PNT  ++I+I++L K  +++ ALSL  +M   G M N   YN++   L + N L+
Sbjct: 504 ASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLD 563

Query: 377 ESYELLREMEESGFKPTHFTL 397
           ++++L+  M E    P + T+
Sbjct: 564 KAFKLMDRMVEQACNPDYITM 584



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 5/246 (2%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           ++ K  CF        LI  L   G +++A+ +  ++K  G C+ +   YN L+   CK 
Sbjct: 358 EMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCL-DRVCYNVLISEFCKK 416

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS 139
             +D  +  L EM+  G   D  T   L+  +   G F  A     ++ +   +   VF+
Sbjct: 417 NKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFT 476

Query: 140 I--LLVAFSKWGEVDKACELIERMDDCNIRLNEKT--FCVLIHGFVKKSRVDKALQLFDK 195
              L+ A+     +D+A ++ + M++   ++   T  + +LI    K+++V+ AL L D 
Sbjct: 477 YGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDD 536

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   +   Y+ I   L     L+ A +L   M      PD+  +  L    S  GE
Sbjct: 537 MKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGE 596

Query: 256 LTLLVK 261
           +T L K
Sbjct: 597 ITKLKK 602


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/579 (25%), Positives = 269/579 (46%), Gaps = 57/579 (9%)

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH-GWVDEHVFSILLVAFSKWGEVD 152
           D   G     L+ L++  C +G+   A+   +   +  G VD   ++ ++  + + G+V+
Sbjct: 45  DTAVGGGSGRLSALIRSLCVAGRTADAVRALDAAGNAAGVVD---YNAMVAGYCRVGQVE 101

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A  L   +    +  N  T+  ++ G   + R+  AL + D+MT         MY VII
Sbjct: 102 AARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVII 158

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-----CSDEGELTLLVKEIWEDR 267
              C++     AL++   +   G T D    + +I +     C DEG L +L K      
Sbjct: 159 ESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEG-LEMLRKLPLFGC 217

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           + + ++   N++++ L +         L+  M+K      V   +  + +   +P+   +
Sbjct: 218 EADIVSY--NAVLKGLCAAKRWGDVEELMDEMVK------VHEALSQMAQHGCTPDIRMY 269

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             II+ + K+G  ++A  +   M   G   NV  YN ++ G+C+++R E++ ELL EM +
Sbjct: 270 ATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ 329

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
                   T N                                   +L+   C++G    
Sbjct: 330 KNCPLDDVTFN-----------------------------------ILVDFFCQNGLVDR 354

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L  M++ G +PD++ Y+  I G      +D A+ L +++ + GC P+ ++Y I++ 
Sbjct: 355 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLK 414

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLC  +R  +AE+L + MI +G +P+  T+N +IN  CK G ++QA+  L +ML     +
Sbjct: 415 GLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQML-VNGCN 473

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+T+IDGL  AG+ ++A+ L N M  KG  PN IT+ ++   L +  R    +  
Sbjct: 474 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQM 533

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  +++  ++ D  ++ A+IS+        LA + L  M
Sbjct: 534 FDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYM 572



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 140/567 (24%), Positives = 247/567 (43%), Gaps = 39/567 (6%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G L  LIR L   G   +A    D        V     YN ++   C+   V  VE   +
Sbjct: 53  GRLSALIRSLCVAGRTADAVRALDAAGNAAGVV----DYNAMVAGYCR---VGQVEAARR 105

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWG 149
                    + YT  P+++  C  G+   AL+V +E+     V    ++ +++ +  + G
Sbjct: 106 LAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSG 165

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
               A  ++E +      L+     ++I+    +  VD+ L++  K+   G  +D   Y+
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 210 VIIGGLCKNK----------QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELT 257
            ++ GLC  K          ++    +  S+M   G TPD  + + +I     EG  E+ 
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIF 316
             +        +    +  N++++ + S    ++A  LL  M  K  P+ DV   +L+ F
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 317 ---KGTVS---------------PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
               G V                P+  ++  +IN   K+G +D A+ L + M   GC  N
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y  ++ GLC++ R  ++ EL+  M + G  P   T N++   LC++  V  A+ L++
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M V G  P +   + +I  L K GK  EA   L  M+ +G  P+++ YS+    L    
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+D  +++F +I       D V YN +IS LCK +    A D    M++ G +P+ +TY 
Sbjct: 526 RIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYT 585

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKES 565
            LI G    G + +A   LS +  + +
Sbjct: 586 ALIKGLASEGLLCEAQDLLSELCSRRA 612



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 37/216 (17%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L   +++  C  +P     +I  L   GLVE+A  L  Q+   G C P+  SY+ +++ L
Sbjct: 428 LMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG-CNPDLISYSTVIDGL 486

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K                                   +G+ ++AL + N +I+ G     
Sbjct: 487 GK-----------------------------------AGKTEEALELLNVMINKGITPNV 511

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + +S +  A ++ G +DK  ++ + + D  IR +   +  +I    K+   D A+     
Sbjct: 512 ITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAY 571

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           M  +G   + + Y  +I GL     L  A  L SE+
Sbjct: 572 MVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 238/509 (46%), Gaps = 53/509 (10%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
           + ++ +G   D +T   L+  YC+  + + A S+  +I+  G+  D   F+ L+      
Sbjct: 92  RRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLN 151

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+V +A    + +      L++ ++  LI+G  K      ALQ+  K+       +  MY
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + II  LCK+K +  A +LYS+M    I+PD    S LI      G+L            
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL------------ 259

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                ++A+ L + M+                   ++P+  +F+
Sbjct: 260 ---------------------EEAFGLFREMVLK----------------NINPDYYTFN 282

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+++ L K+G L  A ++   M + G M NV  Y++L+DG C  N++ ++  +L  + + 
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAME 447
           G  P   +  +M    C+ + V  AL+L   M+ +G  P  V +N+L I  LCK G+   
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL-IDGLCKSGRISY 401

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A+  + +M   G   +I  Y+  I  L     VD A+ L + I   G  PD+  +NI+I 
Sbjct: 402 AWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIY 461

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLCK  R+  A+D+F ++++KG   +  TYN+++NG CK G  D+A   LS+M +     
Sbjct: 462 GLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM-DDNGII 520

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           PD +TY TLI  L      + A  L  EM
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 226/475 (47%), Gaps = 27/475 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCK--NKQLEMALQLYSEMKGSGITPDFEIL 243
           VD  +  F+ + ++   S    ++ I+G L K  N     A+ L   ++  GITPD    
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 244 SKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + LI       E+    +++ K +    + +T+T   N++++ L  NG + +A +     
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF--NTLIKGLCLNGKVKEALHF---- 160

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
              + +  +G  +          +  S+  +IN L K G+   AL + R++       NV
Sbjct: 161 --HDHVLALGFHL----------DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINV 208

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +YN +ID LC    + ++YEL  +M      P   T +++    C    +  A  L R+
Sbjct: 209 VMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M ++   P      +L+  LCK G    A   L  M++EG +P++V YS+ + G   + +
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V+ A  +   I   G  P+  +Y  +I+G CK + V EA  LFN+M  KG+ P   TYN 
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           LI+G CKSG I  A   +  M   ++G P ++ TY  LID LC     D AI L  ++++
Sbjct: 389 LIDGLCKSGRISYAWELVDEM--HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +G  P+  TF  LI GLCK  R + A   F+ +  KG   + + +  +++    E
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 218/470 (46%), Gaps = 15/470 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ +++N L+   C    ++     + ++   G+  D  T   L++  C +G+  +AL 
Sbjct: 100 TPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALH 159

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             + ++  G+ +D+  +  L+    K GE   A +++ ++D   +++N   +  +I    
Sbjct: 160 FHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLC 219

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   V  A +L+ +M     + D   +  +I G C   QLE A  L+ EM    I PD+ 
Sbjct: 220 KHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYY 279

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + L+ +   EG L        +      + ++   +M  +V+  S+   Y L+  + K
Sbjct: 280 TFNILVDALCKEGNL--------KGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK 331

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + + +   +M        +PN  S+  +IN   K   +D ALSLF +M   G   +   
Sbjct: 332 AKHVLNTISQM------GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LIDGLC S R+  ++EL+ EM ++G     FT N +   LC+   V  A+ LV+K++
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG +P +    +LI  LCK G+   A     D++ +G+  +   Y+  + GL      D
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            A  L   +  +G  PD V Y  +I  L       +AE L  EMI + ++
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 213/403 (52%), Gaps = 8/403 (1%)

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE----PIADVGVEMLMIFKGTVSPN 323
           DV+ +    N ++R   ++ SI +   +L +++K      P A + +   + F G ++P+
Sbjct: 46  DVDNVVSSFNHLLRTKPTS-SIIEFNKILGSLVKSNNNHYPTA-ISLSRRLEFHG-ITPD 102

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +F+I+IN      +++ A S+  ++ ++G   +   +N LI GLC + +++E+     
Sbjct: 103 IFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHD 162

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            +   GF    F+  ++   LC+  +   AL ++RK+  +  +  V     +I  LCKH 
Sbjct: 163 HVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
             ++A+   + M+ +   PD+V +SA I G   + +++ A  LFR++      PD   +N
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I++  LCK   +  A+++   M+ +G++P+V TY+ L++G+C    +++A   L+  + +
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT-ISQ 341

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +P+  +Y T+I+G C     D+A+ L+N+M+ KG AP+++T+ +LI GLCK  R   
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A      M + G   ++F +  LI A     +   A  ++K++
Sbjct: 402 AWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 210/473 (44%), Gaps = 19/473 (4%)

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L  R++   I  +  TF +LI+ +   + ++ A  +  K+ K G+  D   ++ +I 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNT 271
           GLC N +++ AL  +  +   G   D      LI      GE    ++ +   + + V  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKI 206

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++ N+I+  L  +  +  AY L   MI  +                +SP+  +F  +I
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK----------------ISPDVVTFSALI 250

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
                 G+L+ A  LFREM       + + +N L+D LC    L+ +  +L  M + G  
Sbjct: 251 YGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVM 310

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T +S+    C    V  A +++  +   G  P       +I   CK     EA   
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             DM  +G  PD V Y++ I GL    R+  A EL  ++  +G   ++  YN +I  LCK
Sbjct: 371 FNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCK 430

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              V +A  L  ++  +G+ P + T+N+LI G CK G +  A      +L K   S +  
Sbjct: 431 NHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK-GYSVNAW 489

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           TY  +++GLC  G  D+A  L ++M++ G  P+ +T+  LI  L   D    A
Sbjct: 490 TYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 187/390 (47%), Gaps = 17/390 (4%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           S  + + SN  +D   +    +++ +P + + +E   I    V  N + +          
Sbjct: 36  SQFQFVPSNIDVDNVVSSFNHLLRTKPTSSI-IEFNKILGSLVKSNNNHYPT-------- 86

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
                A+SL R +   G   ++F +N LI+  C+   +  ++ ++ ++ + G++P   T 
Sbjct: 87  -----AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           N++ + LC    V  AL+    +   G H     + TL I  LCK G+   A + L  + 
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTL-INGLCKIGETRTALQMLRKID 200

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +    ++V Y+  I  L   K V  A EL+  + A    PDVV ++ +I G C   ++ 
Sbjct: 201 GKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA  LF EM+ K + P   T+N+L++  CK GN+  A   L  M+ KE   P+V+TY++L
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM-KEGVMPNVVTYSSL 319

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +DG C+  + + A  + N + + G APN  ++  +I G CK      AL  F  M+ KG+
Sbjct: 320 MDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI 379

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD   + +LI           A+E++ EM
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEM 409



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 39/262 (14%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
               L+  L   G ++ A  +   + +EG+ +PN  +Y+ L++  C    V+  +  L  
Sbjct: 280 TFNILVDALCKEGNLKGAKNMLVVMMKEGV-MPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI------------------------ 127
           +   G   + ++   ++  +C     D+ALS+FN++                        
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398

Query: 128 IDHGW--VDE----------HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           I + W  VDE            ++ L+ A  K   VD+A  L++++ D  I+ +  TF +
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+G  K  R+  A  +F  +   G++ +A  Y++++ GLCK    + A  L S+M  +G
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518

Query: 236 ITPDFEILSKLITSC--SDEGE 255
           I PD      LI +    DE E
Sbjct: 519 IIPDAVTYETLIQALFHKDENE 540


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 52/519 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E  F +L   ++      +A E  E M+     ++E++  V +    +  +VD  L+ F 
Sbjct: 159 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 218

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M             +++ GLCK   +EM  +L  E+   G+  +               
Sbjct: 219 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKAN--------------- 263

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                      ++  N  I+  +  L        +  V   + +
Sbjct: 264 ---------------------------VVTYNAFIEGYFKRLD-------LGGVAEILTL 289

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K  V+ N  ++ ++I+     GK++ A  LF EM + G   +V++Y ++I   C S  
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
           ++ +  L  EM + G  P+  T  ++   +C+   +  A  LV +M+ +G +   V  NT
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I   C+ G   EA R    M ++G   D+  Y++   GL  + R D A  L   +   
Sbjct: 410 L-IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+ +++  +I   CK     EA+ +F EM  KG +P++ TYN+LI+G+ K GN+ +A
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L   LE     PDV T T+LI G CI G+ D A+ L++EM ++G  PN +T+ A+I+
Sbjct: 529 HK-LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 587

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           GL K  R   A   +  MKE G+ PD  V+ +L+ +  S
Sbjct: 588 GLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHS 626



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 231/520 (44%), Gaps = 63/520 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L +VY ++  F +AL  F  +   G+ +DE    + L+A  + G+VD       RM + +
Sbjct: 165 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 224

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           + +   +  +++ G  K+  V+   +L D++   G  ++   Y+  I G  K   L    
Sbjct: 225 VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVA 284

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           ++ + M+  G+            +C                 +V T TLL +    I   
Sbjct: 285 EILTLMEKEGV------------AC-----------------NVVTYTLLIHGFSNI--- 312

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G I++A  L + M +    ADV V                +  II+   + G +  AL 
Sbjct: 313 -GKIEEAQRLFEEMREKGIEADVYV----------------YTSIISCNCRSGNVKRALV 355

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EMT  G + +   Y  LI G+C + ++E +  L+ EM+  G        N++    C
Sbjct: 356 LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 415

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               V  AL L   M  +G E  V     +   LCK  +  EA   L  MV+ G  P+ +
Sbjct: 416 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475

Query: 466 CYSAAI------GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            ++  I      G  ++ KRV      FR++   G  P+++ YN++I G  K   + EA 
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRV------FREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L +E+  +GLIP V T   LI+G C  G +D A+     M ++    P+V+TYT +I G
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQR-GLVPNVVTYTAMISG 588

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           L   GR ++A  L++EM+E G  P+   + +L+  L   D
Sbjct: 589 LSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAD 628



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 26/484 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL--LEALCKSCSVDLVEMRLKEM 92
            L R      +  EA   F+ ++++G  +      +CL  L AL +   VD      + M
Sbjct: 164 LLFRVYADNKMFGEALEAFEHMEKKGFHIDER---SCLVYLLALRRGGQVDSCLRFFRRM 220

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
            +       Y+LT +L   C  G  +    + +E+   G     V ++  +  + K  ++
Sbjct: 221 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 280

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
               E++  M+   +  N  T+ +LIHGF    ++++A +LF++M + G  +D  +Y  I
Sbjct: 281 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 340

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRD 268
           I   C++  ++ AL L+ EM   G+ P       LI      G++    +LV E+ + + 
Sbjct: 341 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM-QGKG 399

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           ++   ++ N+++     +G +D+A  L               +++M  KG +  +  +++
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRL---------------QVVMEKKG-LESDVFAYN 443

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            I + L K  + D A  L   M + G   N   +  LID  C      E+  + REMEE 
Sbjct: 444 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 503

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T N +     +R ++  A  L  ++  +G  P V   T LI   C  GK   A
Sbjct: 504 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 563

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            +   +M Q G +P++V Y+A I GL    R + A +L+ ++   G  PD   Y+ ++  
Sbjct: 564 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 623

Query: 509 LCKA 512
           L  A
Sbjct: 624 LHSA 627



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           +A ++   ++L  ++      ++P     LI      G+V+EA  L   ++++GL   + 
Sbjct: 381 KAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL-ESDV 439

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YN +   LCK    D  +  L  M + G   +  + T L+ +YC  G F +A  VF E
Sbjct: 440 FAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 499

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           + + G V   + +++L+  +SK G + +A +L + +++  +  +  T   LIHG     +
Sbjct: 500 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 559

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD AL+LFD+M + G   +   Y  +I GL K+ + E A +LY EMK +G+TPD  + S 
Sbjct: 560 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 619

Query: 246 LITSCSDEGE 255
           L+ S     E
Sbjct: 620 LVGSLHSADE 629


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 236/519 (45%), Gaps = 52/519 (10%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           E  F +L   ++      +A E  E M+     ++E++  V +    +  +VD  L+ F 
Sbjct: 155 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 214

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M             +++ GLCK   +EM  +L  E+   G+  +               
Sbjct: 215 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKAN--------------- 259

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                      ++  N  I+  +  L        +  V   + +
Sbjct: 260 ---------------------------VVTYNAFIEGYFKRLD-------LGGVAEILTL 285

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K  V+ N  ++ ++I+     GK++ A  LF EM + G   +V++Y ++I   C S  
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
           ++ +  L  EM + G  P+  T  ++   +C+   +  A  LV +M+ +G +   V  NT
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L I   C+ G   EA R    M ++G   D+  Y++   GL  + R D A  L   +   
Sbjct: 406 L-IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 464

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+ +++  +I   CK     EA+ +F EM  KG +P++ TYN+LI+G+ K GN+ +A
Sbjct: 465 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L   LE     PDV T T+LI G CI G+ D A+ L++EM ++G  PN +T+ A+I+
Sbjct: 525 HK-LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           GL K  R   A   +  MKE G+ PD  V+ +L+ +  S
Sbjct: 584 GLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHS 622



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 223/482 (46%), Gaps = 24/482 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L +VY ++  F +AL  F  +   G+ +DE    + L+A  + G+VD       RM + +
Sbjct: 161 LFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD 220

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           + +   +  +++ G  K+  V+   +L D++   G  ++   Y+  I G  K   L    
Sbjct: 221 VEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVA 280

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           ++ + M+  G+  +    + LI   S+ G   E   L +E+ E + +     +  SI+  
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE-KGIEADVYVYTSIISC 339

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              +G++ +A  L   M                 KG + P+  ++  +I+ + K G+++ 
Sbjct: 340 NCRSGNVKRALVLFDEMTD---------------KGLI-PSAHTYGALIHGVCKAGQMEA 383

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L  EM   G   N  ++N LIDG C S  ++E+  L   ME+ G +   F  NS+  
Sbjct: 384 AQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS 443

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+      A  L+  M  +G  P     T LI   CK G  +EA R   +M ++G +P
Sbjct: 444 GLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP 503

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +I+ Y+  I G      +  A +L  ++   G  PDV     +I G C   +V  A  LF
Sbjct: 504 NIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLF 563

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLC 581
           +EM  +GL+P+V TY  +I+G  K G  ++A      M  KE+G +PD   Y++L+  L 
Sbjct: 564 DEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEM--KETGLTPDDTVYSSLVGSLH 621

Query: 582 IA 583
            A
Sbjct: 622 SA 623



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 213/485 (43%), Gaps = 26/485 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL--LEALCKSCSVDLVEMRLKEM 92
            L R      +  EA   F+ ++++G  +      +CL  L AL +   VD      + M
Sbjct: 160 LLFRVYADNKMFGEALEAFEHMEKKGFHIDER---SCLVYLLALRRGGQVDSCLRFFRRM 216

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
            +       Y+LT +L   C  G  +    + +E+   G     V ++  +  + K  ++
Sbjct: 217 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 276

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
               E++  M+   +  N  T+ +LIHGF    ++++A +LF++M + G  +D  +Y  I
Sbjct: 277 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 336

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRD 268
           I   C++  ++ AL L+ EM   G+ P       LI      G++    +LV E+ + + 
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM-QGKG 395

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           ++   ++ N+++     +G +D+A  L   M K    +DV                 +++
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDV----------------FAYN 439

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            I + L K  + D A  L   M + G   N   +  LID  C      E+  + REMEE 
Sbjct: 440 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 499

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T N +     +R ++  A  L  ++  +G  P V   T LI   C  GK   A
Sbjct: 500 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 559

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            +   +M Q G +P++V Y+A I GL    R + A +L+ ++   G  PD   Y+ ++  
Sbjct: 560 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 619

Query: 509 LCKAQ 513
           L  A+
Sbjct: 620 LHSAE 624


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 166/650 (25%), Positives = 282/650 (43%), Gaps = 81/650 (12%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF ++  +G+C PN  ++N L+  LC   ++      LK+M++ G+     T   LL  Y
Sbjct: 220 LFREMSDKGIC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G++  A+ + + +I  G   D   +++ +          KA  L+++M    I  NE
Sbjct: 279 CKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNE 338

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  LI+GFVK+ ++  A Q+F++M+K   + +   Y+ +IGG C     E AL+L   
Sbjct: 339 VTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDH 398

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNG 287
           M+ +G+              ++ G +T  +K ++   + N        CN ++  L  +G
Sbjct: 399 MEAAGL------------RLNEHGNVTEAMK-VYAVMNCNGHGADHFTCNVLVSSLCRDG 445

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            + +A   L  M +      +G+           PN+ ++D IIN     G    A S F
Sbjct: 446 KLGEAEKFLCHMSR------IGL----------VPNSITYDCIINGYGSIGDPLNAFSFF 489

Query: 348 REMTQIGCMQNVFLYNNLIDGLCN-----------------------------------S 372
            +M + G   + F Y +L+ GLC                                    S
Sbjct: 490 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 549

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKH 431
             L E+  L  +M ++   P  +T +S+   LCR+   V A+ L      +G   P    
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T L+  L K G    AF F  +M+++G  PD V ++A I       ++  A + F  + 
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G CP++  YNI++ G  K Q +     L++ M+ +G+ P   T++ LI G  KSG  D
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729

Query: 552 QAMLCLSRMLEKESGS-----------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
             +  L +M+ +ES             P    Y TLI+G+C  G    A  L +EME  G
Sbjct: 730 LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 789

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              + +   A++ GL  C +   A++    M    + P +  F  L+  F
Sbjct: 790 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRF 839



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 234/555 (42%), Gaps = 73/555 (13%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+  + K G +D A E  E +     + +  T  +++   VK  R +    LF +M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           +  G   +   ++++I GLC    L+ A  L  +M+ +G  P     + L+     +G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 257 TLLVKEI------WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
              ++ I        + DV T  +  ++    L +N    +AY LL+ M K         
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDN----LCTNHRSAKAYLLLKKMRK--------- 331

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           EM       +SPN  +++ +IN  +K+GK+ +A  +F EM++     N   YN LI G C
Sbjct: 332 EM-------ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 384

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           +    EE+  LL  ME +G +            L    +V  A+ +   M   GH     
Sbjct: 385 HVGDFEEALRLLDHMEAAGLR------------LNEHGNVTEAMKVYAVMNCNGHGADHF 432

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +L+  LC+ GK  EA +FL  M + G +P+ + Y   I G   I     A   F D+
Sbjct: 433 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 492

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAED------------------------------ 520
              G  P    Y  ++ GLCK   + EA+                               
Sbjct: 493 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 552

Query: 521 -----LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
                LF++M+   ++P   TY+ L+ G C+ G    A+      + + +  P+ + YT 
Sbjct: 553 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 612

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+DGL  AG P  A   + EM +KG  P+ + F A+I    +  +   A   F  M+  G
Sbjct: 613 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 672

Query: 636 MKPDMFVFVALISAF 650
           + P++  +  L+  F
Sbjct: 673 VCPNLATYNILLHGF 687



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 16/365 (4%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS--PNTSSFDIIINTLLKDGKLDLALS 345
           SI   ++LL  +   E + D  VE   +  G V   P+  + ++I+ +++KD + +L  S
Sbjct: 161 SIPSVFDLLIRVYLKEGMIDYAVETFELV-GLVGFKPSVYTCNMILASMVKDKRTELVWS 219

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LFREM+  G   NV  +N LI+GLC    L+++  LL++MEE+GF PT  T N++    C
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++     A+ L+  M  +G E  V    + I  LC + ++ +A+  L  M +E   P+ V
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I G +   ++ +A ++F ++      P+ V YN +I G C      EA  L + M
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              GL  +            + GN+ +AM   + M     G+ D  T   L+  LC  G+
Sbjct: 400 EAAGLRLN------------EHGNVTEAMKVYAVMNCNGHGA-DHFTCNVLVSSLCRDGK 446

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             +A      M   G  PN IT+  +I G      P  A   F  M + G  P  F + +
Sbjct: 447 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 506

Query: 646 LISAF 650
           L+   
Sbjct: 507 LLKGL 511



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 131/604 (21%), Positives = 248/604 (41%), Gaps = 51/604 (8%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           +A +L  ++++E +  PN  +YN L+    K   + +      EM  +    +  T   L
Sbjct: 321 KAYLLLKKMRKE-MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNAL 379

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C+ G F++AL + + +   G  ++EH            G V +A ++   M+ CN 
Sbjct: 380 IGGHCHVGDFEEALRLLDHMEAAGLRLNEH------------GNVTEAMKVYAVMN-CNG 426

Query: 167 RLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              +   C VL+    +  ++ +A +    M++ G   ++  YD II G         A 
Sbjct: 427 HGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 486

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRIL 283
             + +M   G  P F     L+      G L    K +     +     +++ N+++   
Sbjct: 487 SFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAET 546

Query: 284 VSNGSIDQAYNLLQAMI--------------------KGEPIADVGVEMLMIFKGTVSPN 323
             +G++ +A  L   M+                    KG+ +  V +    + +GT+ PN
Sbjct: 547 CKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPN 606

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              +  +++ L K G    A   F EM + G   +   +N +ID      ++ ++ +   
Sbjct: 607 HVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFS 666

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M   G  P   T N +     ++Q ++  L+L   M  +G  P       LI  L K G
Sbjct: 667 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 726

Query: 444 KA------------MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
                          E+   L +M++ G +P    Y   I G+  +  +  A +L  ++ 
Sbjct: 727 IPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 786

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A G     VA + ++ GL    +  +A  + + M+   L+P++AT+  L++ +C+   I 
Sbjct: 787 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 846

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L L  ++E      DV+ Y  LI G+C  G    A  L+ EM  +   PN  T+  L
Sbjct: 847 EA-LKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 905

Query: 612 ITGL 615
           +  +
Sbjct: 906 VDAI 909



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 213/513 (41%), Gaps = 35/513 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G + EA      + R GL VPN+ +Y+C++                 +M   
Sbjct: 437 LVSSLCRDGKLGEAEKFLCHMSRIGL-VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 495

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKA 154
           G     +T   LL+  C  G   +A    N +    G VD  +++ LL    K G + +A
Sbjct: 496 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEA 555

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK-MTKSGFASDAAMYDVIIG 213
             L ++M   N+  +  T+  L+ G  +K +   A+ LF   M +     +  MY  ++ 
Sbjct: 556 VALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVD 615

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GL K    + A   + EM   G  PD    + +I SCS  G++ +   + +        T
Sbjct: 616 GLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM-MKANDFFS-------T 667

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +    +   L +   +   ++  QA+++   +         + +  + P+  +F  +I  
Sbjct: 668 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST------MMREGIFPDKLTFHSLILG 721

Query: 334 LLKDGKLDLALSLF------------REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           L K G  DL + L              EM + G +     Y  LI+G+C    ++ +++L
Sbjct: 722 LSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 781

Query: 382 LREMEESGFKPTHFTLNSMFRCLC---RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             EME  GF       ++M R L    + +D +  L+ + +MR+    P +   T L+  
Sbjct: 782 KDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL---PTIATFTTLMHR 838

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C+  K  EA +    M   G   D+V Y+  I G+        A EL+ ++     CP+
Sbjct: 839 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 898

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           +  Y +++  +  A  + + E L  ++  +GLI
Sbjct: 899 ITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 1/187 (0%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+E F  +   G  P V   N+I++ + K +R      LF EM  KG+ P+V T+N+
Sbjct: 179 IDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNI 238

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LING C  GN+ +A   L +M E+    P ++TY TL++  C  GR   AI L + M  K
Sbjct: 239 LINGLCVEGNLKKAGNLLKQM-EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICK 297

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G   +  T+   I  LC   R   A +  + M+++ + P+   +  LI+ F+ E    +A
Sbjct: 298 GIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVA 357

Query: 660 FEVLKEM 666
            +V  EM
Sbjct: 358 AQVFNEM 364



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/485 (22%), Positives = 194/485 (40%), Gaps = 58/485 (11%)

Query: 24  SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           SR  + P ++ +  +I   GS+G    A   FD + + G   P+ ++Y  LL+ LCK  +
Sbjct: 458 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ-HPSFFTYGSLLKGLCKGGN 516

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSI 140
           +   +  L  +       D      LL   C SG   +A+++F++++ +  + D + +S 
Sbjct: 517 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 576

Query: 141 LLVAFSKWGE-VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           LL    + G+ V   C     M    +  N   +  L+ G  K      A   F++M K 
Sbjct: 577 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 636

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--- 256
           G   D   ++ II    +  Q+  A   +S M+  G+ P+    + L+   S +  L   
Sbjct: 637 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 696

Query: 257 -----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
                T++ + I+ D+      L  +S++  L  +G  D    LL  MI  E    V  E
Sbjct: 697 LSLYSTMMREGIFPDK------LTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV-VLHE 749

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ML   +  V P  + +  +IN + + G +  A  L  EM  +G   +    + ++ GL +
Sbjct: 750 ML---ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLH 806

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             + E++  +L  M      PT  T  ++    CR   +  AL L   M + G +  V  
Sbjct: 807 CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVA 866

Query: 432 NTLLIKELCKHGKAMEAF-----------------------------------RFLTDMV 456
             +LI  +C +G +  AF                                   + LTD+ 
Sbjct: 867 YNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQ 926

Query: 457 QEGFL 461
           + G +
Sbjct: 927 ERGLI 931



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 26/246 (10%)

Query: 442 HGKAMEAFRFLTDMVQE-----GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG-- 494
           HG+   A +FL  ++++       L  + C +A I  L+  +  D A  + R +C  G  
Sbjct: 89  HGRL--ALKFLKWVIKQPGLELKHLTHMYCLTAHI--LVKARMYDSAKSILRHLCQMGIG 144

Query: 495 --------------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
                         C      ++++I    K   +  A + F  +   G  PSV T N++
Sbjct: 145 SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMI 204

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +    K     + +  L R +  +   P+V T+  LI+GLC+ G    A  L  +MEE G
Sbjct: 205 LASMVKDKRT-ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             P  +T+  L+   CK  R +AA+     M  KG++ D+  +   I    +      A+
Sbjct: 264 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 323

Query: 661 EVLKEM 666
            +LK+M
Sbjct: 324 LLLKKM 329


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 35/502 (6%)

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           LL A  ++ +V +   L+E M     +L+ + F  LIH + + + ++KALQ     TK G
Sbjct: 4   LLGAARRYDDVQR---LVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
               A  Y  +I    K   ++  L +Y +M  +   PD    + LI S +   ++    
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 261 KEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
               +        DV T T+L  S+  I    G ID    L ++M               
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTI----GRIDAVMKLFESMTA------------- 163

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             +G   PN  ++  +++     G++D A  +F++M Q G   +   YN LID    + +
Sbjct: 164 --QG-CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQ 220

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           LE +++ +    +S       T NS+   L R+ D+ G + L  +M+ +G         +
Sbjct: 221 LERAFDFV---GKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAI 277

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI+ L   G+  + ++   +MV      DIV  +  +  L    RV+ A ELF+D+   G
Sbjct: 278 LIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKG 337

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              D V YNI+I+GL +A ++  A  L  EM   G  P++ TYN LI+ + K  N+  A 
Sbjct: 338 LNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAAT 397

Query: 555 LCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                M  KE G +P+V++Y++LI+G   AGR D AI L+ EM+ +GC PN +T+  LI 
Sbjct: 398 RLFLEM--KERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLID 455

Query: 614 GLCKCDRPRAALVHFRMMKEKG 635
            L +  R  AA+ + R M++ G
Sbjct: 456 CLIRAGRFGAAMEYLREMRDAG 477



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 225/542 (41%), Gaps = 54/542 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M ++L  ARR   ++ L + + K R  +       LI   G   ++E+A        +EG
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
              P  Y+Y                                   + ++QV+   G     
Sbjct: 61  -GRPTAYTY-----------------------------------SSMIQVFMKGGDVQNG 84

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           L ++ +++   +V +H  F+IL+ + +K  +V++AC +   M   N+  +  T+ +LI  
Sbjct: 85  LLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRS 144

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                R+D  ++LF+ MT  G   +   Y  ++       +++ A  ++ +M   G+ PD
Sbjct: 145 LGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPD 204

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI +    G+L      + + R   T  +  NS++  L   G I     L   M
Sbjct: 205 AVTYNILIDAFGKTGQLERAFDFVGKSRSF-TNEVTYNSLLSSLGRKGDIQGLMELFGQM 263

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            KG VS N  ++ I+I  L   G+++    L+ EM       ++
Sbjct: 264 KA---------------KGLVS-NELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDI 307

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              NN++D L  + R+E ++EL ++M+  G      T N +   L R   +  A  L+ +
Sbjct: 308 VTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLE 367

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +     LI    K      A R   +M + G  P++V YS+ I G     R
Sbjct: 368 MEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGR 427

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            D A+ LFR++ A GC P+ V YN++I  L +A R   A +   EM   G      T +L
Sbjct: 428 TDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSL 487

Query: 540 LI 541
           L+
Sbjct: 488 LV 489



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 197/428 (46%), Gaps = 26/428 (6%)

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK--GEPIADVGVEMLMIF 316
           LV+ + +DR     T L N+++ I      +++A   L A  K  G P A     M+ +F
Sbjct: 17  LVESMQKDR-TKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVF 75

Query: 317 -----------------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            K    P+ ++F+I+I++L K  +++ A ++F +M ++    +V
Sbjct: 76  MKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDV 135

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + Y  LI  L    R++   +L   M   G +P  FT +S+         V  A ++ ++
Sbjct: 136 YTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQ 195

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +P      +LI    K G+   AF F+    +     + V Y++ +  L     
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVG---KSRSFTNEVTYNSLLSSLGRKGD 252

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +   +ELF  + A G   + + Y I+I  L  A RV +   L+ EM+   +   + T N 
Sbjct: 253 IQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINN 312

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +++   K+G ++ A      M  K  G + D +TY  LI+GL  AG+ D A  L  EMEE
Sbjct: 313 VLDCLSKAGRVEAAFELFQDM--KFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEE 370

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            GCAPN IT+  LI+   K     AA   F  MKE+G+ P++  + +LI  F        
Sbjct: 371 NGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDA 430

Query: 659 AFEVLKEM 666
           A  + +EM
Sbjct: 431 AISLFREM 438



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G  G  + A  LF ++K EG C PN+ +YN L++ L ++         L+EM+D 
Sbjct: 418 LIEGFGKAGRTDAAISLFREMKAEG-CPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDA 476

Query: 96  GWGYDKYTLTPLLQV 110
           G    K T + L+++
Sbjct: 477 GCQMGKVTKSLLVRI 491


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 214/445 (48%), Gaps = 19/445 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWE 265
           Y  I+     N Q   AL L++ M  S   P     ++L++  +      +++   E  +
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              ++ +   CN +M  +  +    +A   L  M+K      +G E          P+  
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMK------LGFE----------PDLV 153

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F  +++      +++ AL+LF ++  +G   NV  Y  LI  LC +  L  + E+  +M
Sbjct: 154 TFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            ++G +P   T NS+   LC       A  L+R M  +G +P V   T LI    K GK 
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           MEA      M+Q    PD+  Y+A I GL    R+D A ++F  + ++G  P+ V Y  +
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I G CK++RV +   +F EM  KGL+ +  TY +LI G+C  G  D A    ++M  + +
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD+ TY  L+DGLC  G  + A+M++  M ++    N +T+  +I G+CK  +   A 
Sbjct: 394 -PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
             F  +  KGMKP++  +  +IS F
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGF 477



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 37/483 (7%)

Query: 173 FCVLIHGFVKKSRV----------DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           FC  I  F    ++          ++AL LF +M  S        +  ++  + K K+ +
Sbjct: 40  FCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFD 99

Query: 223 MALQLYSEMKGSGITPDF---EILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLC 276
           + + L+ +M+  GI+P      I+   +   S     +  + ++ +   + D+ T T   
Sbjct: 100 VVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFT--- 156

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
            S++        I+ A  L   ++             M F+    PN  ++  +I+ L K
Sbjct: 157 -SLLHGFCHWNRIEDALALFDQIVG------------MGFR----PNVVTYTTLIHCLCK 199

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +  L+ A+ +F +M   G   NV  YN+L+ GLC   R  ++  LLR+M + G +P   T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++     +   ++ A  L + M      P V   T LI  LC +G+  EA +    M 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G+ P+ V Y+  I G    KRV+   ++F ++   G   + + Y ++I G C   R  
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A+++FN+M ++   P + TYN+L++G C +G +++A++    M ++E    +++TYT +
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM-DINIVTYTII 438

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I G+C  G+ +DA  L+  +  KG  PN IT+  +I+G C+      A   F+ MKE G 
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGF 498

Query: 637 KPD 639
            P+
Sbjct: 499 LPN 501



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 170/342 (49%), Gaps = 1/342 (0%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           S++  I+   L + + + AL LF  M     + ++  +  L+  +    R +    L  +
Sbjct: 48  SNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQ 107

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M+  G  P  +T N +  C+CR      A   + KM   G EP +   T L+   C   +
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A      +V  GF P++V Y+  I  L   + ++ A+E+F  +  +G  P+VV YN 
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++SGLC+  R ++A  L  +M+ +G+ P+V T+  LI+ + K G I +A   L +++ + 
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKE-LYKVMIQM 286

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           S  PDV TYT LI+GLC  GR D+A  ++  ME  G  PN +T+  LI G CK  R    
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              F  M +KG+  +   +  LI  +     P +A EV  +M
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 213/487 (43%), Gaps = 87/487 (17%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD---------DCN 165
           QF++AL +F  ++    +   V F+ LL   +K    D    L E+M           CN
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 166 IRLN--------------------------EKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           I +N                            TF  L+HGF   +R++ AL LFD++   
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           GF  +   Y  +I  LCKN+ L  A++++++M  +GI P+    + L++   + G     
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGR---- 237

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
               W D                         A  LL+ M+K               +G 
Sbjct: 238 ----WSD-------------------------AAWLLRDMMK---------------RG- 252

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN  +F  +I+  +K GK+  A  L++ M Q+    +VF Y  LI+GLC   RL+E+ 
Sbjct: 253 IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEAR 312

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++   ME +G+ P   T  ++    C+ + V     +  +M  +G        T+LI+  
Sbjct: 313 QMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGY 372

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+   A      M      PDI  Y+  + GL     V+ AL +F+ +       ++
Sbjct: 373 CLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y III G+CK  +V +A DLF  + +KG+ P+V TY  +I+G+C+ G I +A     +
Sbjct: 433 VTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKK 492

Query: 560 MLEKESG 566
           M  KE G
Sbjct: 493 M--KEDG 497



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 206/474 (43%), Gaps = 54/474 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +  LL  + K    D+V    ++MQ  G     YT   ++   C S Q  +A  
Sbjct: 79  LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASC 138

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              +++  G+  + V F+ LL  F  W  ++ A  L +++     R N  T+  LIH   
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   ++ A+++F++M  +G   +   Y+ ++ GLC+  +   A  L  +M   GI P   
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQP--- 255

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                     +V T T L ++ +++    G I +A  L + MI 
Sbjct: 256 --------------------------NVITFTALIDAFVKV----GKIMEAKELYKVMI- 284

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          + +V P+  ++  +IN L   G+LD A  +F  M   G   N   
Sbjct: 285 ---------------QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT 329

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVGALNLVRK 419
           Y  LI G C S R+E+  ++  EM + G      T   + +  CL  R DV  A  +  +
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV--AQEVFNQ 387

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +   P ++   +L+  LC +G   +A      M +     +IV Y+  I G+  + +
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           V+ A +LF  + + G  P+V+ Y  +ISG C+   + EA+ LF +M   G +P+
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 191/454 (42%), Gaps = 63/454 (13%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF+Q++  G+  P  Y+ N ++  +C+S         L +M   G+  D  T T LL  +
Sbjct: 104 LFEQMQILGIS-PVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGF 162

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
           C+  + + AL++F++I+  G+                                  R N  
Sbjct: 163 CHWNRIEDALALFDQIVGMGF----------------------------------RPNVV 188

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  LIH   K   ++ A+++F++M  +G   +   Y+ ++ GLC+  +   A  L  +M
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILV 284
              GI P+    + LI +    G++ +  KE+++         DV T T L N     L 
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKI-MEAKELYKVMIQMSVYPDVFTYTALING----LC 303

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           + G +D+A  +   M                      PN  ++  +I+   K  +++   
Sbjct: 304 TYGRLDEARQMFYLME----------------SNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +F EM+Q G + N   Y  LI G C   R + + E+  +M      P   T N +   L
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C    V  AL + + MR +  +  +   T++I+ +CK GK  +AF     +  +G  P++
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           + Y+  I G      +  A  LF+ +   G  P+
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 2/205 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L + G ++EA  +F  ++  G   PN  +Y  L+   CKS  V+       EM   
Sbjct: 298 LINGLCTYGRLDEARQMFYLMESNGY-YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKA 154
           G   +  T T L+Q YC  G+ D A  VFN++       D   +++LL      G V+KA
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKA 416

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + + M    + +N  T+ ++I G  K  +V+ A  LF  +   G   +   Y  +I G
Sbjct: 417 LMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD 239
            C+   +  A  L+ +MK  G  P+
Sbjct: 477 FCRRGFIHEADALFKKMKEDGFLPN 501


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/668 (23%), Positives = 272/668 (40%), Gaps = 77/668 (11%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF  + R     P   +YN L+ ALC+   +   +  L  M   GW  D +T   L+  Y
Sbjct: 115 LFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C + Q + A  +F ++   G+  + V ++ L+  F + G +D+A EL   M   ++    
Sbjct: 175 CRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDM---- 230

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T   L+ G     R ++ L +  KM + G+      Y  ++   C+ ++ E A ++ +E
Sbjct: 231 YTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNE 290

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR----DVNTMTLLCNSIMRILVSN 286
           M  SG+ P     + ++ +   EG ++  V+     R    + N  T   N+I++   + 
Sbjct: 291 MFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTY--NAIVQGFCNA 348

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G + +A  LL  M       + GVE          P+  +++++I     DG +  A  L
Sbjct: 349 GKVYKAMALLDQM------RECGVE----------PDVVTYNLLIRGQCIDGHIGSAFRL 392

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            R M   G   + + YN LID LC + +++E+  L   +E  G +P   T N++   LC+
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A   +  M   G+ P     +  I+ LCK   + E   F+ +M+Q+   P  V 
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVN 512

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I  L + +   LA  ++  + + GC PDVV Y   +   C   R+ EAE++  EM 
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM-------------------------- 560
               I     YN LI+G    G  D+A+  L  M                          
Sbjct: 573 KCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAE 632

Query: 561 ------------------------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
                                   ++K S      TY ++++G     R D+   L + M
Sbjct: 633 HVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLM 692

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           +E+    N   + AL+   CK      A      M   G  P++  +  L+S   +E   
Sbjct: 693 KEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQA 752

Query: 657 PLAFEVLK 664
             A E+ +
Sbjct: 753 DRAKEIFR 760



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 234/549 (42%), Gaps = 37/549 (6%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACE 156
           + +Y LTPL+            L +F  +  H         ++ L+ A  +  ++  A  
Sbjct: 103 FSRYALTPLM------------LRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQR 150

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            +  M     R +  TF  LI G+ +  +++ A  LF KM   GF+ DA  Y  +I G C
Sbjct: 151 YLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFC 210

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD--EGELTLLVKEIWEDRDVNTMTL 274
           +  +++ AL+L+ EM      PD    + L+    D   GE  L + +  ++      T 
Sbjct: 211 EAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTR 266

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              +++ +       ++A  +L  M                F   + P   +  I++N  
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEM----------------FDSGLMPCVVTCTIVVNAY 310

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            ++G++  A+ +F  M   GC  NV+ YN ++ G CN+ ++ ++  LL +M E G +P  
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N + R  C    +  A  L+R M   G         +LI  LCK GK  EA      
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +   G  P+ V ++  I GL    + D+A     ++ + G  PD   Y+  I  LCK + 
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             E     +EM+ K + PS   Y ++IN      N   A     +M+  +  SPDV+TYT
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV-SQGCSPDVVTYT 549

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T +   C  GR D+A  +  EM++     + + +  LI G     +   A+   + M   
Sbjct: 550 TSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGV 609

Query: 635 GMKPDMFVF 643
              P+ F F
Sbjct: 610 ASMPNHFTF 618



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 221/530 (41%), Gaps = 55/530 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           F  LL  FS++        L   M           T+  LI    +++ +  A +    M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG+  DA  ++ +I G C+ +QLE+A  L+ +M   G + D    + LI     EG  
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALI-----EG-- 208

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                              C +        G ID+A  L + M +               
Sbjct: 209 ------------------FCEA--------GRIDEALELFREMTQ--------------- 227

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +   ++  L   G+ +  L + ++M ++G       Y  L+D  C   + E
Sbjct: 228 -----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAE 282

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ ++L EM +SG  P   T   +    CR   + GA+ +   MR +G EP V     ++
Sbjct: 283 EAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIV 342

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           +  C  GK  +A   L  M + G  PD+V Y+  I G      +  A  L R +  +G  
Sbjct: 343 QGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLA 402

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D   YN++I  LCK  +V EA  LF+ +  +G+ P+  T+N +ING CK+G  D A   
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTF 462

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L  M+     +PD  TY+  I+ LC      + +   +EM +K   P+ + +  +I  L 
Sbjct: 463 LENMISA-GYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                  A   +  M  +G  PD+  +   + A+ +E     A  V+ EM
Sbjct: 522 NERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEM 571



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 141/641 (21%), Positives = 261/641 (40%), Gaps = 53/641 (8%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           P R  +QD V         +   LI      G ++EA  LF ++ +     P+ Y++  L
Sbjct: 191 PFRGFSQDAV---------SYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTHAAL 236

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++ LC +   +     L++M++ GW         L+ ++C   + ++A  + NE+ D G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 133 VDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
           +   V  +I++ A+ + G +  A  + E M       N  T+  ++ GF    +V KA+ 
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L D+M + G   D   Y+++I G C +  +  A +L   M+G+G+  D    + LI +  
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 252 DEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
             G++     + +  E R +   ++  N+++  L   G  D A   L+ MI      D  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 310 -----VEMLMIFKGT--------------VSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                +E L   KG+              V P+T ++ I+IN L  +    LA  ++ +M
Sbjct: 477 TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM 536

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +V  Y   +   CN  RL+E+  ++ EM++          N++          
Sbjct: 537 VSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596

Query: 411 VGALNLVRKMRVQGHEP----------------WVKHNTLLIKELCKHGKAMEAFRFLTD 454
             A+ +++ M      P                  +H  L    + K  +  + F     
Sbjct: 597 DRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFEL 656

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M +         Y + + G  + +R+D    L   +       +   YN +++  CK + 
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRM 716

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
            ++A  L   MI  G +P++  Y  L++G    G  D+A         KE  + D I + 
Sbjct: 717 YSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNT-DEIVWK 775

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            +IDG    G  D    + + +E+  C P+  T+  L   L
Sbjct: 776 VIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 281/650 (43%), Gaps = 94/650 (14%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S  A   LIRC G   +V+E+ +++++                    LC S        
Sbjct: 157 LSVNAATLLIRCFGRAQMVDESFLVYNE--------------------LCPS-------R 189

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW---VDEHVFSILLVA 144
           RL  +++            L+ V    G+ D AL + +E++        + +   I+  A
Sbjct: 190 RLTHIRNI-----------LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSA 238

Query: 145 FSKWGEVDKACE------LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
            SK  +V +A +      L+ +  +  +  N      LI    +  R D+A  +   + K
Sbjct: 239 LSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMK 298

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   +AA  + ++  L + ++ +    L +EMK   I P+                   
Sbjct: 299 LGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPN------------------- 339

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                     V T  +L N + +       +D+A  + + M  GE    +          
Sbjct: 340 ----------VVTFGILINHLCKF----RRVDEALEVFEKMNGGESNGFL---------- 375

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEE 377
            V P+  +++ +I+ L K G+ +  L L   M +Q  CM N   YN LIDG C ++ +E 
Sbjct: 376 -VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEA 434

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + EL  +M + G  P   TLN++   +C+   + GA+    +M+ +G +      T LI+
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C      +A     +M++ G  PD + Y   I GL    ++D A  +   +   G  P
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSP 554

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+V++N++I+G C+  ++ EA ++  EM   G+ P   TYN LI+ + K+G+   A   +
Sbjct: 555 DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLM 614

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG-CAPNRITFMALITGLC 616
            +M+ KE   P V+TY  LI   C+ G  D+A+ ++ +M       PN + +  LI  LC
Sbjct: 615 KKMV-KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLC 673

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + ++   AL     MK KG+KP+   F A+      +     AFE++  M
Sbjct: 674 RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 193/395 (48%), Gaps = 25/395 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  VG  EE   L ++++ +  C+PN  +YNCL++  CK+  ++       +M   
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKD 445

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  TL  L+   C  G+ + A+  FNE+   G     V ++ L+ AF     ++KA
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + M +     +   +  LI G  +  ++D+A  +  KM ++GF+ D   ++V+I G
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNT 271
            C+  +L+ A ++  EM+ +GI PD    + LI+  S  G+ +    L+K++ ++  V T
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           + +   +++     NG++D+A  + + M                    V PNT  ++I+I
Sbjct: 626 V-VTYGALIHAYCLNGNLDEAMKIFRDMSS---------------TSKVPPNTVIYNILI 669

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N+L +  ++DLALSL  +M   G   N   +N +  GL   N L +++EL+  M E    
Sbjct: 670 NSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACN 729

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           P + T+  +   L      VG    ++   VQG+E
Sbjct: 730 PDYITMEILTEWLS----AVGETAKLKSF-VQGYE 759



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%)

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L+LF+   +H     V A  ++I    +AQ V E+  ++NE+     +  +   N+LI+ 
Sbjct: 144 LDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHI--RNILIDV 201

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPD-------VITYTTLIDGLCIAGRPDDAIMLWNEM 596
             + G +D A+  L  ML+ ++  P        V +  +  D +  A   ++ + L ++ 
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKF 261

Query: 597 EEKGCAPNRITFMALITGLCKCDRP-RAALVHFRMMKEKGM 636
            E    PN I    LI+ LC+  R  RA  V   +MK  G+
Sbjct: 262 AEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV 302



 Score = 39.3 bits (90), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 1/158 (0%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S  S+    +    L + +VK     +    G LI      G ++EA  +F  +      
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN   YN L+ +LC+   VDL    + +M+  G   +  T   + +         KA  
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
           + + + +H    +++   IL    S  GE  K    ++
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 258/571 (45%), Gaps = 56/571 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++EA  +  +++ +GL V +  + NC+L+       V++ E    EM   G   D  +
Sbjct: 168 GKLKEAVNMVVEMQNQGL-VXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              ++   CN G+  +A    N +++ G+ VD    ++++ AF + G V++      +M 
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  N   F  LI+G  K+  + +A +L ++M + G+  +   +  +I GLCK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 223 MALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            A +L+ ++ +  G  P+    + +I     E +L                         
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL------------------------- 381

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                   ++A  LL  M +               +G V PNT+++  +I+   K G   
Sbjct: 382 --------NRAEMLLSRMQE---------------QGLV-PNTNTYTTLIDGHCKVGNFV 417

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L   M + G   N++ YN +IDGLC    L+E+Y LL ++   G +    T   + 
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              CR+ D   +L    KM   G  P +   T LI   C+  +  E+ R   + V  G +
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLI 537

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P    Y++ I G        LA++LF+ +  HGC PD + Y  +ISGLCK  ++ +A +L
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           ++ M+ KGL P   T   L   +CK  +   A+  L R+ +++     + T  TL+  LC
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW----IRTVNTLVRKLC 653

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
             G+ D A + ++++ +K    NR+T +  +
Sbjct: 654 SEGKLDMAALFFHKLLDKEPNVNRVTLLGFM 684



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 227/508 (44%), Gaps = 31/508 (6%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           R NE   C++++ F +  ++ +A+ +  +M   G        + ++        +E+A  
Sbjct: 152 RANEVMQCMVMN-FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAEN 210

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW----EDRDVNTMTLLCNSIMRI 282
           ++ EM   G++PD      ++ +C + G +  L  E W     +R        C  I+  
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRV--LEAEKWLNAMVERGFIVDNATCTLIIDA 268

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G +++       M          VEM       ++PN  +F  +IN L K G +  
Sbjct: 269 FCQKGYVNRVVGYFWKM----------VEM------GLAPNVINFTALINGLCKQGSIKQ 312

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL-LREMEESGFKPTHFTLNSMF 401
           A  L  EM + G   NV+ +  LIDGLC     E+++ L L+ +   G+KP   T  +M 
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C+   +  A  L+ +M+ QG  P     T LI   CK G  + A+  +  M +EGF 
Sbjct: 373 NGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS 432

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+I  Y+A I GL     +D A  L   +  HG   D V Y I++S  C+      +   
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG---SPDVITYTTLID 578
           FN+M+  G  P + +Y  LI+ +C+   + ++     R+ E+       P   TYT++I 
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKES----ERLFEEAVSLGLIPTKKTYTSMIC 548

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  G    A+ L+  M   GCAP+ IT+ ALI+GLCK  +   A   +  M +KG+ P
Sbjct: 549 GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
                + L   +  + +   A  VL  +
Sbjct: 609 CEVTRLTLAYEYCKKDDSSTAINVLDRL 636



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 190/374 (50%), Gaps = 8/374 (2%)

Query: 283 LVSNGSIDQAYNLLQAMI-----KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           L+ N ++++A  ++Q M+      G+    V + + M  +G V  +T + + +++  +  
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVX-STQTLNCVLDVAVGM 202

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +++A ++F EM Q G   +   +  ++   CN  R+ E+ + L  M E GF   + T 
Sbjct: 203 GLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATC 262

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             +    C++  V   +    KM   G  P V + T LI  LCK G   +AF  L +MV+
Sbjct: 263 TLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR 322

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            G+ P++  ++  I GL      + A  LF + + + G  P+V  Y  +I+G CK  ++ 
Sbjct: 323 RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLN 382

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE L + M  +GL+P+  TY  LI+G CK GN  +A   L  ++ KE  SP++ TY  +
Sbjct: 383 RAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE-LMDLMGKEGFSPNIYTYNAI 441

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC  G  D+A  L N++   G   + +T+  L++  C+      +LV F  M + G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 637 KPDMFVFVALISAF 650
            PD+  +  LIS F
Sbjct: 502 TPDIHSYTTLISXF 515



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 232/563 (41%), Gaps = 64/563 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +GLVE A  +F ++ + G+  P+  S+  ++ A C    V   E  L  M + G+  D  
Sbjct: 202 MGLVEIAENMFVEMCQRGVS-PDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNA 260

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T T ++  +C  G  ++ +  F ++++ G     + F+ L+    K G + +A EL+E M
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQ 220
                + N  T   LI G  KK   +KA +LF K+ +S G+  +   Y  +I G CK  +
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNS 278
           L  A  L S M+  G+ P+    + LI      G      +  ++      +      N+
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+  L   GS+D+AY LL  +      AD GV               ++ I+++   +  
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQAD-GV---------------TYTILMSVHCRQA 484

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
             + +L  F +M ++G   ++  Y  LI   C   +++ES  L  E    G  PT  T  
Sbjct: 485 DTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           SM    CR  +   A+ L ++M   G  P       LI  LCK  K  +A      M+ +
Sbjct: 545 SMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P             ++ R+ LA E                        CK    + A
Sbjct: 605 GLSP------------CEVTRLTLAYE-----------------------YCKKDDSSTA 629

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++ + +  +  I +V   N L+   C  G +D A L   ++L+KE   P+V   T L  
Sbjct: 630 INVLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAALFFHKLLDKE---PNVNRVTLL-- 681

Query: 579 GLCIAGRPDDAIMLWNEMEEKGC 601
           G        +   L +E+ E+ C
Sbjct: 682 GFMNKCYESNKYGLVSELSERIC 704



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 154/334 (46%), Gaps = 19/334 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G  E+A  LF ++ R     PN ++Y  ++   CK   ++  EM L  MQ+ 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C  G F +A  + + +   G+    + ++ ++    K G +D+A
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ ++    ++ +  T+ +L+    +++  +++L  F+KM K GF  D   Y  +I  
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISX 514

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTM 272
            C+ KQ++ + +L+ E    G+ P  +  + +I      G  +L VK  +   +      
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDII- 330
           ++   +++  L     +D A NL  AM+ KG    +V    L         ++++ +++ 
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 331 ----------INTLLK----DGKLDLALSLFREM 350
                     +NTL++    +GKLD+A   F ++
Sbjct: 635 RLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKL 668


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 246/530 (46%), Gaps = 22/530 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD---YGWGYDKYTLTPLLQVYCNSGQFDK 119
           V +  SYN +L ALC+   +D     L+ M          +  + T L++  C   +  +
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 120 ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           A+ +   + D G   D   +  L+       +VD A EL+  M +  I  N   +  L+H
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+ K  R +   ++F++M+  G   D  MY  +I  LC++ +++ A ++   M   G+ P
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 239 DFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +    + LI S   EG +   L +++   ++ V    +  N+++  L S   +D+A  LL
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M++GE                V P+  +F+ +I+ L K G +  AL +   M + GC 
Sbjct: 293 EEMMQGET--------------RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N+  +N LI GL   ++++++ EL+ EM  SG +P  FT + +    C+ + V  A + 
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + +MR QG EP   H   L+K +C  G   +A     +M +   L D   YS  I G   
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFK 457

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
                +A E  +D+   G  PD V Y+I I+   K+  +A AE +  +M   G +P VA 
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGR 585
           ++ LI G+   G+ ++ +     M  K+    P +I+      G  I G+
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQ 567



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 165/329 (50%), Gaps = 4/329 (1%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMT---QIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           S++ ++  L + G LD AL L R M+   ++    N   Y  L+  LC   R  ++  LL
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R M++ G +P   T  ++ R LC   DV  A+ L+ +M   G EP V   + L+   CK 
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+     +   +M   G  PD+V Y+A I  L    +V  A  +   +   G  P+VV Y
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N++I+ +CK   V EA DL   M  KG+ P V TYN LI G      +D+AM  L  M++
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            E+   PD++T+ ++I GLC  G    A+ +   M E GC  N + F  LI GL +  + 
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKV 357

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + A+     M   G++PD F +  LI+ F
Sbjct: 358 KKAMELMDEMASSGLQPDSFTYSILINGF 386



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 182/378 (48%), Gaps = 20/378 (5%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+++  L   G +D A  LL+ M     +A               PN  S+  ++  L  
Sbjct: 60  NTVLAALCRQGCLDAALFLLRVMSHEPRLAS-------------RPNAISYTTLMRALCA 106

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           D +   A+ L R M   G   +V  Y  LI GLC++  ++ + ELL EM ESG +P    
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166

Query: 397 LNSMFRCLCR--RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            + +    C+  R + VG   +  +M  +G EP V   T LI  LC+HGK  +A R +  
Sbjct: 167 YSCLLHGYCKTGRWESVG--KVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM 224

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M + G  P++V Y+  I  +     V  AL+L +++   G  PDVV YN +I+GL     
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284

Query: 515 VAEAEDLFNEMIT--KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
           + EA  L  EM+     + P + T+N +I+G CK G + QA L +  M+ +     +++ 
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQA-LQVRAMMAENGCRCNLVA 343

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           +  LI GL    +   A+ L +EM   G  P+  T+  LI G CK  +   A  +   M+
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403

Query: 633 EKGMKPDMFVFVALISAF 650
            +GM+P+   ++ L+ A 
Sbjct: 404 HQGMEPEPVHYIPLLKAM 421



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 234/540 (43%), Gaps = 60/540 (11%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDD---CNIRLNEKTFCVLIHGFVKKSRVDKAL 190
           D   ++ +L A  + G +D A  L+  M        R N  ++  L+       R  +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L   M   G   D   Y  +I GLC    ++ A++L +EM  SGI P+  + S L+   
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 251 SDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              G    + K  E    R +    ++  +++  L  +G + +A  ++  M       + 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM------TER 228

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G+E          PN  +++++IN++ K+G +  AL L + M++ G   +V  YN LI G
Sbjct: 229 GLE----------PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITG 278

Query: 369 LCNSNRLEESYELLREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           L +   ++E+  LL EM   E+  +P   T NS                           
Sbjct: 279 LSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS--------------------------- 311

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                   +I  LCK G   +A +    M + G   ++V ++  IGGL+ + +V  A+EL
Sbjct: 312 --------VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMEL 363

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             ++ + G  PD   Y+I+I+G CK ++V  AE   +EM  +G+ P    Y  L+   C 
Sbjct: 364 MDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCD 423

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G + QA    + M    +   D   Y+T+I G   +G    A     +M ++G  P+ +
Sbjct: 424 QGMMGQARDLFNEM--DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAV 481

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+   I    K     AA    + M   G  PD+ VF +LI  + ++ +     E+ +EM
Sbjct: 482 TYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 169/353 (47%), Gaps = 18/353 (5%)

Query: 331 INTLLKDGKLDLALSLFREM------------TQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           +  LL+ G+ + A  L R +            + +  +++   YN ++  LC    L+ +
Sbjct: 16  LAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAA 75

Query: 379 YELLREMEES---GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
             LLR M        +P   +  ++ R LC  +    A+ L+R M+  G  P V     L
Sbjct: 76  LFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTL 135

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I+ LC       A   L +M + G  P++V YS  + G     R +   ++F ++   G 
Sbjct: 136 IRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGI 195

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PDVV Y  +I  LC+  +V +A  + + M  +GL P+V TYN+LIN  CK G++ +A L
Sbjct: 196 EPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREA-L 254

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM--EEKGCAPNRITFMALIT 613
            L + + ++   PDV+TY TLI GL      D+A+ L  EM   E    P+ +TF ++I 
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIH 314

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLCK    R AL    MM E G + ++  F  LI   L       A E++ EM
Sbjct: 315 GLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 220/520 (42%), Gaps = 59/520 (11%)

Query: 14  LRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           LRV++ +    R    P A+ +  L+R L +     +A  L   ++  G+  P+  +Y  
Sbjct: 79  LRVMSHE---PRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGV-RPDVVTYGT 134

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           L+  LC +  VD     L EM + G   +    + LL  YC +G+++    VF E+   G
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              + V ++ L+ +  + G+V KA  +++ M +  +  N  T+ VLI+   K+  V +AL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE-MKG-SGITPDFEILSKLIT 248
            L   M++ G   D   Y+ +I GL    +++ A+ L  E M+G + + PD         
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDL-------- 306

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                  MT   NS++  L   G + QA  +             
Sbjct: 307 -----------------------MTF--NSVIHGLCKIGWMRQALQVRA----------- 330

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                M+ +     N  +F+++I  LL+  K+  A+ L  EM   G   + F Y+ LI+G
Sbjct: 331 -----MMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            C   ++E +   L EM   G +P       + + +C +  +  A +L  +M        
Sbjct: 386 FCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDA 445

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
             ++T +I    K G+   A  FL DM+ EG +PD V YS  I        +  A  + +
Sbjct: 446 AAYST-MIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
            + A G  PDV  ++ +I G        +  +L  EM  K
Sbjct: 505 QMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A   LI  L  V  V++A  L D++   GL  P++++Y+ L+   CK   V+  E  L E
Sbjct: 343 AFNLLIGGLLRVHKVKKAMELMDEMASSGL-QPDSFTYSILINGFCKMRQVERAESYLSE 401

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M+  G   +     PLL+  C+ G   +A  +FNE+  +  +D   +S ++    K GE 
Sbjct: 402 MRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEK 461

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
             A E ++ M D  +  +  T+ + I+ F K   +  A ++  +MT SGF  D A++D +
Sbjct: 462 KIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSL 521

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS--CSDEGE 255
           I G       E  L+L  EM    +  D +I+S ++TS   S EG+
Sbjct: 522 IQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQ 567


>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 883

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 270/603 (44%), Gaps = 42/603 (6%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  ++  LC    ++  E    +M+++G   D Y  + +++ +  +    KA  +FN++
Sbjct: 293 AYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKM 352

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           ++ G  ++  + S +L    + G    A +L E   + NI L+   + V      K  +V
Sbjct: 353 VEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGKV 412

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           ++A++LF +MT  G A D   Y  +IGG C   +   A  L  EM GSG TPD  I + L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIVIYNVL 472

Query: 247 ITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
               +  G  +  L   ++ EDR V    +  N ++  L+  G +D+A    +++     
Sbjct: 473 AGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYESL----- 527

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       +     N +S   ++    + G LD A   F  + +    ++V  Y  
Sbjct: 528 ------------EHKSRENDAS---MVKGYCEAGCLDQAFERFIRL-EFPLPKSV--YFT 569

Query: 365 LIDGLC-NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           L   LC   N + ++ +LL  M E G +P       +    CR  +V  A      +  +
Sbjct: 570 LFTSLCAEKNHISKAQDLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQFFEILVTK 629

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P +   T++I   C+  +  +A+    DM +    PD+V Y+  +         +  
Sbjct: 630 EIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNS-------NPE 682

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L++ R++ A    PDVV Y I+I+  C+   V +A  LF +M  + ++P V TY +L+  
Sbjct: 683 LDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYTVLLK- 741

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
                  +   L L+R ++     PDV  YT LID  C  G   +A  ++++M E G  P
Sbjct: 742 -------NNPELDLTREMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDP 794

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +   + ALI G CK    + A + F +M E G+KPD   +  LI+ F        AF ++
Sbjct: 795 DAAPYTALIAGCCKMGNLKEAKMIFDLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLM 854

Query: 664 KEM 666
           KEM
Sbjct: 855 KEM 857



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 243/579 (41%), Gaps = 37/579 (6%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE------HVFSILLVAFSKWG 149
           GWG D+   T L+++    G   +  SV   +   G +++       V + L+ A++   
Sbjct: 102 GWGLDQKLDTFLVEL-VRKGDAGRGFSVMELLKAIGEMEQSLVLLIRVSTALVKAYANLE 160

Query: 150 EVDKACELIERMDDCNIRLNE-KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             ++A ++  R      R  + K    L++  +   R D  + +F ++ + G  +DA  Y
Sbjct: 161 MFEEAIDIFFRTYHSLGRAPDIKALNFLLNRMIASGRTDMVVGVFWEIERLGLDADAHTY 220

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDFEILSKLITSCSDE--GELTLLVKEIWE 265
            +++  LC+N   E   +L   +  S    P    L+ +   C ++      LL++ +  
Sbjct: 221 VLVVQALCRNDDKEGVDKLLIRLLNSETRNPCVFYLNFIEGLCLNQMASMAYLLLQPL-- 278

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAY-NLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            R+VN           ILV    +  AY  +++ +     I D     L + +  + P+ 
Sbjct: 279 -REVN-----------ILVDMSDLGIAYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDV 326

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             +  II    K   +  A  +F +M + G   N  + ++++   C       +Y+L  E
Sbjct: 327 YVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEE 386

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
             E          N  F  L +   V  A+ L R+M  +G  P V + T LI   C  GK
Sbjct: 387 FRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +AF  + +M   G  PDIV Y+   GGL        ALE  + +   G  P  V +N+
Sbjct: 447 CSDAFDLMIEMDGSGKTPDIVIYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNM 506

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GL  A ++ +AE  +  +  K    S      ++ G+C++G +DQA     R +  E
Sbjct: 507 VIEGLIVAGKLDKAEAFYESLEHK----SRENDASMVKGYCEAGCLDQA---FERFIRLE 559

Query: 565 SGSPDVITYTTLIDGLCI-AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              P  + Y TL   LC        A  L + M E G  P +  +  LI   C+ +  R 
Sbjct: 560 FPLPKSV-YFTLFTSLCAEKNHISKAQDLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRK 618

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLAF 660
           A   F ++  K + PD+F +  +I+ +  L+EL    A 
Sbjct: 619 ARQFFEILVTKEIIPDLFTYTIMINTYCRLNELKQAYAL 657



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 14/248 (5%)

Query: 430 KHNTLLIKELCKHGKA------MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           K +T L+ EL + G A      ME  + + +M Q   L  I   +A +    +++  + A
Sbjct: 108 KLDTFLV-ELVRKGDAGRGFSVMELLKAIGEMEQSLVLL-IRVSTALVKAYANLEMFEEA 165

Query: 484 LELF-RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           +++F R   + G  PD+ A N +++ +  + R      +F E+   GL     TY L++ 
Sbjct: 166 IDIFFRTYHSLGRAPDIKALNFLLNRMIASGRTDMVVGVFWEIERLGLDADAHTYVLVVQ 225

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C++ + +     L R+L  E+ +P V  Y   I+GLC+      A +L   + E    
Sbjct: 226 ALCRNDDKEGVDKLLIRLLNSETRNPCVF-YLNFIEGLCLNQMASMAYLLLQPLREVNIL 284

Query: 603 PNR----ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            +     I +  ++ GLC   R   A   F  M+E G+ PD++V+ A+I      +N P 
Sbjct: 285 VDMSDLGIAYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPK 344

Query: 659 AFEVLKEM 666
           AF++  +M
Sbjct: 345 AFDIFNKM 352


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 257/544 (47%), Gaps = 58/544 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+V  +S   +KA +V+  +I+HG +   + F+ +L +  K G++++  ++   M   N
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +E T+ +LI+GF K  ++++A +    M +SGFA     ++ +I G CK    + A 
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +  EM  +GI P     +  I  C+                       LC+        
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYI--CA-----------------------LCDF------- 356

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G ID A  LL +M                     +P+  S++ +++  +K GK   A  
Sbjct: 357 -GRIDDARELLSSM--------------------AAPDVVSYNTLMHGYIKMGKFVEASL 395

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF ++       ++  YN LIDGLC S  LE +  L  EM      P   T  ++ +   
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMV-QEGFLPD 463
           +  ++  A  +  +M  +G +P    + T  + EL + G + +AFR   +MV  +   PD
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKAFRLHEEMVATDHHAPD 514

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  Y+  I GL  +  +  A+E  R I   G  PD V Y  +I G  +  +   A +L++
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM+ K L PSV TY +LI G  K+G ++QA    + M +K    P+V+T+  L+ G+C A
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKA 633

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D+A     +MEE+G  PN+ ++  LI+  C  ++    +  ++ M +K ++PD +  
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693

Query: 644 VALI 647
            AL 
Sbjct: 694 RALF 697



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 222/493 (45%), Gaps = 31/493 (6%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + KKS  +K L  F+KM + GF       ++++  L  ++ +  A  +Y  M   GI P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 240 FEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQA---- 292
               + ++ SC   G+L   V +IW   + R++    +  N ++     NG +++A    
Sbjct: 238 VITFNTMLDSCFKAGDLER-VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296

Query: 293 --------------YN-LLQAMIKGEPIADV-GVEMLMIFKGTVSPNTSSFDIIINTLLK 336
                         +N L++   K     D  GV   M+  G + P TS+++I I  L  
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCD 355

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G++D A    RE+       +V  YN L+ G     +  E+  L  ++      P+  T
Sbjct: 356 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC   ++ GA  L  +M  Q   P V   T L+K   K+G    A     +M+
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRV 515
           ++G  PD   Y+    G + +   D A  L  ++ A     PD+  YN+ I GLCK   +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A +   ++   GL+P   TY  +I G+ ++G    A      ML K    P VITY  
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL-YPSVITYFV 590

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI G   AGR + A     EM+++G  PN +T  AL+ G+CK      A  +   M+E+G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650

Query: 636 MKPDMFVFVALIS 648
           + P+ + +  LIS
Sbjct: 651 IPPNKYSYTMLIS 663



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 214/487 (43%), Gaps = 33/487 (6%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G +E  + ++ ++KR  +   +  +YN L+    K+  ++       +M+  G+    Y
Sbjct: 251 AGDLERVDKIWLEMKRRNIEF-SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           +  PL++ YC  G FD A  V +E+++ G +     ++I + A   +G +D A EL+  M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
              ++     ++  L+HG++K  +  +A  LFD +           Y+ +I GLC++  L
Sbjct: 370 AAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-------DVNTMTL 274
           E A +L  EM    I PD    + L+      G L++   E++++        D    T 
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM-ATEVYDEMLRKGIKPDGYAYTT 484

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                +R+    G  D+A+ L + M+  +  A               P+ + +++ I+ L
Sbjct: 485 RAVGELRL----GDSDKAFRLHEEMVATDHHA---------------PDLTIYNVRIDGL 525

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G L  A+   R++ ++G + +   Y  +I G   + + + +  L  EM      P+ 
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T   +     +   +  A     +M+ +G  P V  +  L+  +CK G   EA+R+L  
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M +EG  P+   Y+  I    D ++ +  ++L++++      PD   +  +   L K   
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 705

Query: 515 VAEAEDL 521
             E E L
Sbjct: 706 SREVEFL 712


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 240/514 (46%), Gaps = 15/514 (2%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L   F + G +++A E   RM +       ++   L+H   K        + F+ M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A     Y+V+I  LCK   LE + +L+ +M+  G++PD    + LI      G L
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             +     E +DV         +  I+  NG       L+    K E +         + 
Sbjct: 341 EEVASLFNEMKDVGC-------VPDIITYNG-------LINCYCKFEKMPRAFEYFSEMK 386

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  ++  +I+   K+G +  A+ LF +M + G + N F Y +LID  C +  L 
Sbjct: 387 NNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLT 446

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+++LL +M ++G K    T  ++   LC+   ++ A  + R M   G  P  +  T L+
Sbjct: 447 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 506

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               K  +  +A + L  M +    PD++ Y + I G    ++++    +  ++ + G  
Sbjct: 507 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGIS 566

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            + V    II    KA + ++A + F EM   G+  ++ TY +LI+G CK+G ++ A+  
Sbjct: 567 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDY 626

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             RML      P+V  YT+LIDGLC     + A  L++EM+ +G  P+   F ALI G  
Sbjct: 627 FCRMLSL-GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 685

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           K    + ALV    M E  ++ D+ V+ +L+S F
Sbjct: 686 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 140/576 (24%), Positives = 258/576 (44%), Gaps = 17/576 (2%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C    G    L      +GL+EEAN  F ++ R    +P   S N LL  L KS +  LV
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRM-RNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
                +M   G     +T   ++   C  G  + +  +F ++ + G   + V ++ L+  
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + K G +++   L   M D     +  T+  LI+ + K  ++ +A + F +M  +G   +
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +I   CK   ++ A++L+ +M+ +G+ P+    + LI +    G LT    E W
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLT----EAW 449

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           +         L N +++  V    +     LL  + K   + +       + K  +SPN 
Sbjct: 450 K---------LLNDMLQAGVKLNIVTYT-ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             +  +++  +K  +++ A+ + ++MT+     ++ LY ++I G C+  +LEE+  +L E
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M+  G         ++     +      ALN  ++M+  G E  +    +LI  LCK G 
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A  +   M+  G  P++  Y++ I GL     ++ A +LF ++   G  PD+ A+  
Sbjct: 620 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I G  K   + EA  L + M    +   +  Y  L++G+ + G + QA    + M+EK 
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK- 738

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
              P+ +    L+      G+ D+AI L NEME  G
Sbjct: 739 GILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/611 (24%), Positives = 255/611 (41%), Gaps = 91/611 (14%)

Query: 119 KALSVFNEIIDHGWVDEHVFSI-----LLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           K + +F+  +   WV + +  +     L + F KW                  R   +++
Sbjct: 118 KIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAG-----------SQVGFRHTTESY 166

Query: 174 CVLIH----------------GFVKKSRVDKAL---QLFDKM--TKSGFASDAAMYDVII 212
           C+++H                  +  SR+D       +FD +  T++   S + ++DV+ 
Sbjct: 167 CIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLF 226

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDV 269
               +   LE A + +S M+     P     + L+   S  G    LV++ + D     +
Sbjct: 227 SVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGN-GQLVRKFFNDMIGAGI 285

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                  N ++  L   G ++ +  L   M       ++G+          SP+  +++ 
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQM------REMGL----------SPDVVTYNS 329

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+   K G L+   SLF EM  +GC+ ++  YN LI+  C   ++  ++E   EM+ +G
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            KP   T +++    C+   + GA+ L   MR  G  P     T LI   CK G   EA+
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L DM+Q G   +IV Y+A + GL    R+  A E+FR +   G  P+   Y  ++ G 
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE-SGSP 568
            KA+R+ +A  +  +M    + P +  Y  +I G C    +++  L L  M  +  S +P
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569

Query: 569 ---------------------------------DVITYTTLIDGLCIAGRPDDAIMLWNE 595
                                             ++TY  LIDGLC AG  + A+  +  
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M   G  PN   + +LI GLCK +   +A   F  M+ +GM PD+  F ALI   L   N
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689

Query: 656 PPLAFEVLKEM 666
              A  ++  M
Sbjct: 690 LQEALVLISRM 700



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 221/514 (42%), Gaps = 57/514 (11%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + +  LI   G VG +EE   LF+++K  G CVP+  +YN L+   CK   +   
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG-CVPDIITYNGLINCYCKFEKMPRA 378

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
                EM++ G   +  T + L+  +C  G    A+ +F ++   G + +E  ++ L+ A
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDA 438

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G + +A +L+  M    ++LN  T+  L+ G  K  R+ +A ++F  M K G + +
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-TSCSDEG-ELTLLVKE 262
             +Y  ++ G  K +++E A+++  +M    I PD  +   +I   CS    E T L+ E
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             + R +                                                 + +P
Sbjct: 559 EMKSRGI-------------------------------------------------SANP 569

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
             S+   II+   K GK   AL+ F+EM  +G    +  Y  LIDGLC +  +E + +  
Sbjct: 570 VIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M   G +P      S+   LC+   +  A  L  +M+ +G  P +   T LI    KH
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G   EA   ++ M +     D+  Y++ + G      +  A + F ++   G  P+ V  
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 747

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             ++    K  ++ EA +L NEM   GLI   AT
Sbjct: 748 ICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/622 (23%), Positives = 258/622 (41%), Gaps = 74/622 (11%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           GW  D YT   L+  YC + Q D A  +F+++   G+  + V ++ L+    + G +D+A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL   MD  ++ +    +  L+ G     R ++ L +  +M + G+      Y  ++  
Sbjct: 65  VELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
            C+ ++ + A ++  EM   G+ P     + +I +   EG ++  L V E+ + R     
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N++++   + G + +A  LL  M                    V+P+  +++++I 
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKM----------------RACGVNPDAVTYNLLIR 224

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
               DG ++ A  L R M   G + + + YN LI+ LC   R +++  L   +E  G KP
Sbjct: 225 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 284

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T NS+   LC+      A   + KM   G  P     +  I+ LCK   + E   F+
Sbjct: 285 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 344

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+Q+   P  V Y+  I  L+  +   L    + ++ + GC PDVV Y   +   C  
Sbjct: 345 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 404

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------ 560
            R+ EAE++  EM   G+      YN L++G    G  D A+  L +M            
Sbjct: 405 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 464

Query: 561 ---------------------------------------LEKESGSPDVITYTTLIDGLC 581
                                                  ++K    P+  TY+++++G  
Sbjct: 465 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 524

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             GR ++A  L + M+E   + N   + AL+T  CK  R   A V    M + G  P + 
Sbjct: 525 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 584

Query: 642 VFVALISAFLSELNPPLAFEVL 663
            +  L+S  + E     A E+ 
Sbjct: 585 SYQHLLSGLICEGQTDKAKEIF 606



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 268/642 (41%), Gaps = 54/642 (8%)

Query: 13  PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           PLR  AQDVV         +   LI  L   G ++EA  LF ++ +     P+ + Y  L
Sbjct: 37  PLRGFAQDVV---------SYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAAL 82

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           ++ LC +   +   + L+ M++ GW         ++   C   +  +A  +  E+ + G 
Sbjct: 83  VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 142

Query: 133 VDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
               V  + ++ A+ K G +  A  ++E M     + N  T+  L+ GF  + +V KA+ 
Sbjct: 143 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           L +KM   G   DA  Y+++I G C +  +E A +L   M+G G+  D    + LI +  
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 252 DEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
            +G         +  E R +    +  NS++  L  +G  D A+  L+ M+      D  
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 310 -----VEMLMIFKGT--------------VSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
                +E L   KG+              V P+T ++ I+I+ LLK+    L    + EM
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +V  Y   +   C   RL E+  +L EM ++G        N++          
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKH--------------GKAME---AFRFLT 453
             A++++++M      P      +L++ L +                KA+E    F    
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M +  FLP+   YS+ + G  +  R + A  L   +       +   Y  +++  CK++
Sbjct: 503 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R  +A  L   MI  G IP + +Y  L++G    G  D+A         K+  SPD I +
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY-SPDEIVW 621

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             +IDGL   G  D +  +   +E   C P+  T+  L   L
Sbjct: 622 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 206/471 (43%), Gaps = 22/471 (4%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +SG+  DA  ++ +I G C+  Q+++A  L+ +M   G   D    + LI    + G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 256 LTLLVKEIWEDRDVNTMTL-------LCNS--------IMRILVSNG--SIDQAYNLLQA 298
           +   V E++ + D   M +       LCN+        ++R +   G     +AY  +  
Sbjct: 61  IDEAV-ELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD 119

Query: 299 MIKGEPIADVGVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
               E  A    EML  +F+  ++P   +   +IN   K+G++  AL +   M   GC  
Sbjct: 120 FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKP 179

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           NV+ YN L+ G CN  ++ ++  LL +M   G  P   T N + R  C    +  A  L+
Sbjct: 180 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL 239

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           R M   G          LI  LCK G+  +A      +   G  P+ V +++ I GL   
Sbjct: 240 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 299

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            + D+A +    + + GC PD   Y+  I  LCK +   E      EM+ K + PS   Y
Sbjct: 300 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 359

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            ++I+   K  N          M+   SG +PDV+TYTT +   CI GR ++A  +  EM
Sbjct: 360 TIVIHKLLKERNYGLVARTWGEMV--SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            + G   + + +  L+ G     +   A+   + M      P+ F +  L+
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 5/266 (1%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M  SG++P  +T NS+    CR   V  A +L  KM ++G    V     LI+ LC+ G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA     +M Q    PD+  Y+A + GL + +R +  L + R +   G  P   AY  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++   C+ ++  EAE++  EM  KGL P V T   +IN +CK G +  A+  L  +++  
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLR 175

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+V TY  L+ G C  G+   A+ L N+M   G  P+ +T+  LI G C      +A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
               R+M+  G+  D + + ALI+A 
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINAL 261



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 7/213 (3%)

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           MV+ G+ PD   +++ I G     +VD+A +LF  +   G   DVV+Y  +I GLC+A R
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITY 573
           + EA +LF EM      P +  Y  L+ G C +   ++ +L L RM  KE G  P    Y
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRM--KELGWRPSTRAY 114

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             ++D  C   +  +A  +  EM EKG AP  +T  A+I   CK  R   AL    +MK 
Sbjct: 115 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 174

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G KP+++ + AL+  F +E     A  +L +M
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 220/474 (46%), Gaps = 40/474 (8%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP- 238
           F   + V  A  LF ++ +      A  ++ I+G L K+K     L L  +M+  GI P 
Sbjct: 51  FHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPV 110

Query: 239 --DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              F+   +L+    +    T L+K                     L   G I QA    
Sbjct: 111 LFHFQHPHQLMGYHPNTITFTTLIKG--------------------LCLKGQIHQA---- 146

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             ++  + +  +G ++  +  GT          +I+ L K G+   AL L R +      
Sbjct: 147 --LLFHDNVVAMGFQLDQVGYGT----------LIHGLCKVGETRAALDLLRRVDGNLVQ 194

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV +Y+ +IDG+C    + ++++L  EM   G  P   T +++         +  A++L
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             KM ++  +P V    +L+   CK GK  E       M+++G  P++V Y + + G   
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           +K V+ A  +   +   G  PD+ +YNI+I G CK ++V EA +LF EM  K +IP V T
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI+G CK G I  A+  +  M ++    PD+ITY++++D LC   + D AI L  ++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDR-GVPPDIITYSSILDALCKNHQVDKAIALLTKL 433

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +++G  PN  T+  LI GLCK  R   A   F  +  KG    +  +  +I  F
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 212/464 (45%), Gaps = 51/464 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+      G++ +A    + +     +L++  +  LIHG  K      AL L  ++
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +    +  MY  II G+CK+K +  A  LYSEM   GI+P+    S LI+     G  
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS-----GFF 243

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           T+                            G +  A +L   MI         +E     
Sbjct: 244 TV----------------------------GQLKDAIDLFNKMI---------LE----- 261

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + P+  +F+I+++   KDGK+    ++F  M + G   NV  Y +L+DG C    + 
Sbjct: 262 --NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++  +L  M + G  P   + N +    C+ + V  A+NL ++M  +   P V     LI
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLI 379

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK   A + + +M   G  PDI+ YS+ +  L    +VD A+ L   +   G  
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P++  Y I+I GLCK  R+ +A ++F +++ KG   +V TY ++I+G+C  G  D+A+  
Sbjct: 440 PNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 499

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           LS+M +  S  PD +TY  +I  L      D A  L  EM  +G
Sbjct: 500 LSKM-KDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRG 541



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 238/503 (47%), Gaps = 33/503 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM------------- 92
           V +A  LF ++ R+    P    +N +L +L KS     V    ++M             
Sbjct: 57  VVDAFSLFSRLLRQN-PTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ 115

Query: 93  ---QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
              Q  G+  +  T T L++  C  GQ  +AL   + ++  G+ +D+  +  L+    K 
Sbjct: 116 HPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKV 175

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GE   A +L+ R+D   ++ N   +  +I G  K   V+ A  L+ +M   G + +   Y
Sbjct: 176 GETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 235

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             +I G     QL+ A+ L+++M    I PD    + L+     +G++        E + 
Sbjct: 236 SALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK-------EGKT 288

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V  M ++   I   +V+  S+   Y L++ + K + I      +  + +  V+P+  S++
Sbjct: 289 VFAM-MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI------LYTMSQRGVNPDIQSYN 341

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+   K  K+D A++LF+EM     + +V  YN+LIDGLC   ++  + +L+ EM + 
Sbjct: 342 ILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR 401

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T +S+   LC+   V  A+ L+ K++ QG  P +   T+LI  LCK G+  +A
Sbjct: 402 GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 461

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                D++ +G+   +  Y+  I G  +    D AL L   +  + C PD V Y III  
Sbjct: 462 HNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS 521

Query: 509 LCKAQRVAEAEDLFNEMITKGLI 531
           L       +AE L  EMIT+GL+
Sbjct: 522 LFDKDENDKAEKL-REMITRGLL 543



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 72/426 (16%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           +SI     +N  +  A++L   +++  P                +P    F+ I+ +L+K
Sbjct: 45  SSISTTFHNNNDVVDAFSLFSRLLRQNP----------------TPPAIEFNKILGSLVK 88

Query: 337 DGKLDLALSLFREM----------------TQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
                  LSL ++M                  +G   N   +  LI GLC   ++ ++  
Sbjct: 89  SKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL 148

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLIKE 438
               +   GF+       ++   LC+  +   AL+L+R  RV G+  +P V   + +I  
Sbjct: 149 FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR--RVDGNLVQPNVVMYSTIIDG 206

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           +CK     +AF   ++MV +G  P++V YSA I G   + ++  A++LF  +      PD
Sbjct: 207 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPD 266

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT---------------------- 536
           V  +NI++ G CK  ++ E + +F  M+ +G+ P+V T                      
Sbjct: 267 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILY 326

Query: 537 -------------YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
                        YN+LI+G+CK   +D+AM     M  K    PDV+TY +LIDGLC  
Sbjct: 327 TMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI-IPDVVTYNSLIDGLCKL 385

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+   A+ L +EM ++G  P+ IT+ +++  LCK  +   A+     +K++G++P+M+ +
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY 445

Query: 644 VALISA 649
             LI  
Sbjct: 446 TILIDG 451



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKR--EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           G LI  L  VG   E     D ++R    L  PN   Y+ +++ +CK   V+       E
Sbjct: 166 GTLIHGLCKVG---ETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE 222

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGE 150
           M   G   +  T + L+  +   GQ   A+ +FN+ I+++   D + F+IL+  F K G+
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           + +   +   M    I+ N  T+C L+ G+     V+KA  +   M++ G   D   Y++
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           +I G CK K+++ A+ L+ EM    I PD    + LI      G+++  +K + E  DR 
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V    +  +SI+  L  N  +D+A  LL  +       D G+           PN  ++ 
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKL------KDQGIR----------PNMYTYT 446

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I+ L K G+L+ A ++F ++   G    V  Y  +I G CN    +E+  LL +M+++
Sbjct: 447 ILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDN 506

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
              P   T   + R L  + +   A  L R+M  +G
Sbjct: 507 SCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRG 541


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 254/578 (43%), Gaps = 62/578 (10%)

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILL 142
           +E  L+EM+       +  L+ +L  Y + G  DKAL V++ ++   +     +  + LL
Sbjct: 117 IEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLL 176

Query: 143 VAFSKWGEVDKAC----ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
               K   ++ A     E+I+R +  +I ++  T  +++ G   K R++  ++L +    
Sbjct: 177 NLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWG 236

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---E 255
            G   +   Y+ +I G CK  ++E A +L+ ++K  G  P  +    L+      G    
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
           + LL+ E+ +DR ++    + N+I         ID  Y L                    
Sbjct: 297 IDLLLLEM-KDRGLSVNVQMYNNI---------IDARYKL-------------------- 326

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                      FDI     LK            EM++  C  ++  YN LI+  C+   +
Sbjct: 327 ----------GFDIKAKDTLK------------EMSENCCEPDLVTYNTLINHFCSRGEV 364

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EE+ +LL +    G  P   T   +    C++ +   A + + +M   G E  +     L
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  L   G+   A      M+  G LPD   Y+  + GL    ++ +A  +  ++     
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD   Y  ++ G  +   + EA+ LF  +I KGL P V  YN++I G+ KSG +D A+L
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           C+ +M  +    PD+ T++T+IDG       +  + ++  M ++ C PN +T+ +LI G 
Sbjct: 545 CIDKM-RRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGY 603

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           C+    + A   F MM+  G+KP +  +  LI +F  E
Sbjct: 604 CRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKE 641



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 158/647 (24%), Positives = 273/647 (42%), Gaps = 42/647 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL  ++     VGLV++A  ++  V +    +P+ Y+ N LL  L K   ++       E
Sbjct: 135 ALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDE 194

Query: 92  MQDYGWG----YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFS 146
           M D   G     D YT + +++  C  G+ +  + +       G V   VF + L+  + 
Sbjct: 195 MIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYC 254

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K GEV+ A +L +++         +TF  L++GF K    +    L  +M   G + +  
Sbjct: 255 KKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQ 314

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKE 262
           MY+ II    K      A     EM  +   PD    + LI      GE+     LL + 
Sbjct: 315 MYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT 374

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           I      N +T     ++      G   +A + L  M      +  G+E+ MI       
Sbjct: 375 IRRGLAPNKLTY--TPLVHGYCKQGEYTKATDYLIEM------STSGLEVDMI------- 419

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
              S+  +I+ L+  G++D AL++   M   G + +  +YN L++GL    +L  +  +L
Sbjct: 420 ---SYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM +    P  F   ++     R  ++  A  L + +  +G +P V    ++IK   K 
Sbjct: 477 TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 536

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A   +  M +   +PDI  +S  I G +    ++  L++F  +    C P+VV Y
Sbjct: 537 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 596

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I+G C+      AE LF+ M + GL PSV TY++LI  +CK   + +A+     ML 
Sbjct: 597 TSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLI 656

Query: 563 KESGSPDVITYTTLIDGL------CIAGRPDDAIM--------LWNEMEEKGCAPNRITF 608
            +  +P+   +  L++G        ++  P++            ++ M   G       +
Sbjct: 657 NKC-TPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAY 715

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
             ++  LC+    + AL     M   G+  D   FVALI     E N
Sbjct: 716 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGN 762



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 233/548 (42%), Gaps = 34/548 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
             G L+     +G+ E  ++L  ++K  GL V N   YN +++A  K       +  LKE
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSV-NVQMYNNIIDARYKLGFDIKAKDTLKE 338

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M +     D  T   L+  +C+ G+ ++A  +  + I  G   ++  ++ L+  + K GE
Sbjct: 339 MSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGE 398

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
             KA + +  M    + ++  ++  LIHG V    VD AL + D+M   G   DA +Y+V
Sbjct: 399 YTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNV 458

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRD 268
           ++ GL K  +L MA  + +EM    I PD  + + L+      G L    K  ++  ++ 
Sbjct: 459 LMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKG 518

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           ++   +  N +++    +G +D A   +  M +   + D+                 +F 
Sbjct: 519 LDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDI----------------FTFS 562

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II+  +K   ++  L +F  M +  C  NV  Y +LI+G C     + + +L   M   
Sbjct: 563 TIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSH 622

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK------- 441
           G KP+  T + +    C+   +  A++    M +    P       L+            
Sbjct: 623 GLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVS 682

Query: 442 ------HGKAMEAFR-FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
                 H  +   F  F + M+ +G+      Y+  +  L   + V  AL+L   + A G
Sbjct: 683 REPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFG 742

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
            C D V++  +I G+C      E  ++ +  + +G +     Y+L ++ +   G I +A 
Sbjct: 743 LCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEAS 802

Query: 555 LCLSRMLE 562
             L  M++
Sbjct: 803 GILQAMIK 810



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 20/294 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + PG +G+  +I+     G+++ A +  D+++R    VP+ ++++ +++   K  +++ V
Sbjct: 519 LDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRR-AHHVPDIFTFSTIIDGYVKQHNMNAV 577

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
                 M       +  T T L+  YC  G+   A  +F+ +  HG     V +SIL+ +
Sbjct: 578 LKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGS 637

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK-----SRVDKALQ-------- 191
           F K  ++ KA    E M       N+  F  L++GF        SR    L         
Sbjct: 638 FCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFE 697

Query: 192 -LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
             F +M   G+   AA Y+ I+  LC+ + ++ ALQL ++M   G+  D      LI   
Sbjct: 698 DFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGI 757

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI--LVSNGSIDQAYNLLQAMIKG 302
             EG        I  D +   + +     + +   +  G I +A  +LQAMIKG
Sbjct: 758 CLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKG 811



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 39/173 (22%)

Query: 517 EAEDLFNEMITKGLIPS----------------------------------VATY--NLL 540
           E E    EM TK  IP+                                   +TY  N L
Sbjct: 116 EIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSL 175

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSP---DVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           +N   K   I+ A      M+++++G     D  T + ++ GLC+ GR +D I L     
Sbjct: 176 LNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRW 235

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            KGC PN + +  LI G CK     +A   F+ +K KG  P +  F +L++ F
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGF 288


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 242/536 (45%), Gaps = 37/536 (6%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F +    D A  L  +M+   I LN  +F +LI  F    ++  +L  F K+TK GF  D
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEM--KGS--------GITPDFEILSKLITSCSDEG 254
              ++ ++ GLC   ++  AL L+  M   GS        G+TP     + LI     EG
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEG 235

Query: 255 EL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            +     L+ K + +   ++ +T    +I+  +   G    A NLL  M +         
Sbjct: 236 RVLEAAALVNKMVGKGLHIDVVTY--GTIVNGMCKMGDTKSALNLLSKMEETH------- 286

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                    + P+   +  II+ L KDG    A  LF EM + G   NVF YN +IDG C
Sbjct: 287 ---------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 337

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           +  R  ++  LLR+M E    P   T N++     +   +  A  L  +M  +   P   
Sbjct: 338 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 397

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               +I   CKH +  +A + + D++     PD+V ++  I      KRVD  ++L R+I
Sbjct: 398 TYNSMIYGFCKHNRFDDA-KHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREI 453

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G   +   YN +I G C+   +  A+DLF EMI+ G+ P   T N+L+ G+C++  +
Sbjct: 454 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 513

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           ++A L L  +++      D + Y  +I G+C   + D+A  L+  +   G  P+  T+  
Sbjct: 514 EEA-LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 572

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +I+G C       A V F  MK+ G +PD   +  LI   L       + E++ EM
Sbjct: 573 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 628



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 240/547 (43%), Gaps = 51/547 (9%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YS+N L++  C    +        ++   G+  D  T   LL   C   +  +AL++F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             +++ G                         L ++M +  +     TF  LI+G   + 
Sbjct: 200 GYMVETG------------------------SLFDQMVEIGLTPVVITFNTLINGLCLEG 235

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           RV +A  L +KM   G   D   Y  I+ G+CK    + AL L S+M+ + I PD  I S
Sbjct: 236 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 295

Query: 245 KLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            +I     +G  +    L  E+ E + +       N ++    S G    A  LL+ MI+
Sbjct: 296 AIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 354

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E                ++P+  +F+ +I+  +K+GKL  A  L  EM       +   
Sbjct: 355 RE----------------INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 398

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++I G C  NR +++  +   M      P   T N++    CR + V   + L+R++ 
Sbjct: 399 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 454

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G          LI   C+      A     +M+  G  PD +  +  + G  + ++++
Sbjct: 455 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 514

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ALELF  I       D VAYNIII G+CK  +V EA DLF  +   G+ P V TYN++I
Sbjct: 515 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 574

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G+C    I  A +   +M  K++G  PD  TY TLI G   AG  D +I L +EM   G
Sbjct: 575 SGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632

Query: 601 CAPNRIT 607
            + +  T
Sbjct: 633 FSGDAFT 639



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 209/475 (44%), Gaps = 64/475 (13%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEI 242
           +D A+  FD M +S     A   + +IG   +  + ++A+ LY +M+   I  +   F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 243 LSKLITSC-------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           L K    C       S  G+LT    ++    DV T     N+++  L     I +A  L
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLT----KLGFQPDVVTF----NTLLHGLCLEDRISEALAL 198

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              M++   + D  VE+       ++P   +F+ +IN L  +G++  A +L  +M   G 
Sbjct: 199 FGYMVETGSLFDQMVEI------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 252

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  +++G+C     + +  LL +MEE+  KP                DVV    
Sbjct: 253 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP----------------DVVIY-- 294

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                            + +I  LCK G   +A    ++M+++G  P++  Y+  I G  
Sbjct: 295 -----------------SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 337

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R   A  L RD+      PDV+ +N +IS   K  ++ EAE L +EM+ + + P   
Sbjct: 338 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 397

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I G+CK    D A      M      SPDV+T+ T+ID  C A R D+ + L  E
Sbjct: 398 TYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 452

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +  +G   N  T+  LI G C+ D   AA   F+ M   G+ PD      L+  F
Sbjct: 453 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 31/389 (7%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S+D A +    M++  P           F   V  N      +I   ++  + D+A+SL+
Sbjct: 86  SLDDAIDFFDYMVRSRP-----------FYTAVDCNK-----VIGVFVRMNRPDVAISLY 129

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R+M       N++ +N LI   C+ ++L  S     ++ + GF+P   T N++   LC  
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189

Query: 408 QDVVGAL----------NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             +  AL          +L  +M   G  P V     LI  LC  G+ +EA   +  MV 
Sbjct: 190 DRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 249

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G   D+V Y   + G+  +     AL L   +      PDVV Y+ II  LCK    ++
Sbjct: 250 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 309

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+ LF+EM+ KG+ P+V TYN +I+G+C  G    A   L  M+E+E  +PDV+T+  LI
Sbjct: 310 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLTFNALI 368

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 G+  +A  L +EM  +   P+ +T+ ++I G CK +R   A   F +M      
Sbjct: 369 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---- 424

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           PD+  F  +I  +          ++L+E+
Sbjct: 425 PDVVTFNTIIDVYCRAKRVDEGMQLLREI 453



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF ++  +G+  PN ++YNC+++  C        +  L++M +     D  T
Sbjct: 305 GHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 363

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+      G+  +A  + +E++    + D   ++ ++  F K    D A  + + M 
Sbjct: 364 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 423

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             ++     TF  +I  + +  RVD+ +QL  ++++ G  ++   Y+ +I G C+   L 
Sbjct: 424 SPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 479

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  L+ EM   G+ PD                                 T+ CN ++  
Sbjct: 480 AAQDLFQEMISHGVCPD---------------------------------TITCNILLYG 506

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              N  +++A  L +                +I    +  +T +++III+ + K  K+D 
Sbjct: 507 FCENEKLEEALELFE----------------VIQMSKIDLDTVAYNIIIHGMCKGSKVDE 550

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LF  +   G   +V  YN +I G C  + + ++  L  +M+++G +P + T N++ R
Sbjct: 551 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 610

Query: 403 CLCRRQDVVGALNLVRKMRVQG 424
              +  ++  ++ L+ +MR  G
Sbjct: 611 GCLKAGEIDKSIELISEMRSNG 632



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 18/295 (6%)

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL--VRKMRVQGHEPWVKHNTLLIKELC 440
           R++E+   K     LNS  R +  R    G  +L  + ++  +G E  +K  +   K L 
Sbjct: 30  RDIEKKNTKSGGVRLNSR-RLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSL- 87

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
                 +A  F   MV+       V  +  IG  + + R D+A+ L+R +       ++ 
Sbjct: 88  -----DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIY 142

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           ++NI+I   C   +++ +   F ++   G  P V T+N L++G C    I +A+     M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202

Query: 561 LEKES---------GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +E  S          +P VIT+ TLI+GLC+ GR  +A  L N+M  KG   + +T+  +
Sbjct: 203 VETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 262

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + G+CK    ++AL     M+E  +KPD+ ++ A+I     + +   A  +  EM
Sbjct: 263 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 317



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 14/251 (5%)

Query: 53  FDQVKR--EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           FD  K   + +  P+  ++N +++  C++  VD     L+E+   G   +  T   L+  
Sbjct: 412 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 471

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           +C     + A  +F E+I HG   + +  +ILL  F +  ++++A EL E +    I L+
Sbjct: 472 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 531

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              + ++IHG  K S+VD+A  LF  +   G   D   Y+V+I G C    +  A  L+ 
Sbjct: 532 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 591

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRIL 283
           +MK +G  PD    + LI  C   GE+   ++ I E R      D  T+ ++ +     L
Sbjct: 592 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-----L 646

Query: 284 VSNGSIDQAYN 294
           +++G +D++++
Sbjct: 647 ITDGRLDKSFS 657


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 23/484 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +++++    + G    A E+ + M +  +  N  T+  +I G +K   ++   +L D+M 
Sbjct: 18  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 77

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-- 255
             G   +A  Y+V++ GLC+  ++     L  EM    + PD    S L    S  G+  
Sbjct: 78  CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137

Query: 256 --LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             L+L  K +     +   T  C+ ++  L  +G +  A  +LQ+++    +        
Sbjct: 138 AMLSLFGKYLKNGVTIGDYT--CSILLNGLCKDGKVSIAEEVLQSLVNAGLV-------- 187

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P    ++ +IN   + G+L+ A S F +M       +   YN LI+GLC + 
Sbjct: 188 --------PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R+  + +LL EM+++G  PT  T N++     R   +     ++ +M+  G +P V    
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            ++   CK+GK  EA   L DM  +  LP+   Y+A I   ++    D A  L   + ++
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P +V YN++I GLC   +++EAE++ N +    LIP   +YN LI+  C  GNID+A
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 419

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            L L + + K      V TY  LI GL  AGR ++   L+ +M +    P+      ++ 
Sbjct: 420 -LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 478

Query: 614 GLCK 617
              K
Sbjct: 479 AYSK 482



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 226/504 (44%), Gaps = 27/504 (5%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  ++ V+I G  +  R   A+++FD+MT+     +   Y+ +I G  K   LE   +L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 229 SEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRI 282
            +M   G+ P+   + +L   +      GE + L+ E+   +   D  T ++L + + R 
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR- 132

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              NG      +L    +K       GV        T+   T S  I++N L KDGK+ +
Sbjct: 133 ---NGDSKAMLSLFGKYLKN------GV--------TIGDYTCS--ILLNGLCKDGKVSI 173

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  + + +   G +    +YN LI+G C +  LE ++    +M+    KP H T N++  
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+ + +  A +L+ +M+  G  P V+    LI    + G+  + F  L++M + G  P
Sbjct: 234 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++V Y + +       ++  A+ +  D+      P+   YN II    +     +A  L 
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +M + G+ PS+ TYNLLI G C    I +A   ++  L      PD ++Y TLI   C 
Sbjct: 354 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS-LSNHRLIPDAVSYNTLISACCY 412

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G  D A+ L   M + G      T+  LI+GL    R       ++ M +  + P   +
Sbjct: 413 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
              ++ A+    N   A ++ KEM
Sbjct: 473 HNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/523 (22%), Positives = 227/523 (43%), Gaps = 21/523 (4%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           +  ++ R+G   PN +SYN ++  + ++    D VE+   EM +     +  T   ++  
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-FDEMTERAVLPNHITYNTMIDG 59

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           +   G  +    + ++++ HG     + +++LL    + G + +   L++ M    +  +
Sbjct: 60  HIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+ +L  G  +       L LF K  K+G         +++ GLCK+ ++ +A ++  
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
            +  +G+ P   I + LI      GEL        +   R +    +  N+++  L    
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            I  A +LL  M       D GV          +P   +F+ +I+   + G+L+    + 
Sbjct: 240 RITNAQDLLMEM------QDNGV----------NPTVETFNTLIDAYGRTGQLEKCFIVL 283

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM + G   NV  Y ++++  C + ++ E+  +L +M      P     N++       
Sbjct: 284 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 343

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                A  LV KM+  G  P +    LLIK LC   +  EA   +  +     +PD V Y
Sbjct: 344 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 403

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I        +D AL+L + +  +G    V  Y+ +ISGL  A R+ E E L+ +M+ 
Sbjct: 404 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 463

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
             ++PS A +N+++  + K GN  +A      ML+K +   D 
Sbjct: 464 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 506



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 3/350 (0%)

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G   PN  S++++I  + + G+   A+ +F EMT+   + N   YN +IDG      LE 
Sbjct: 9   GAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 68

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            + L  +M   G KP   T N +   LCR   +     L+ +M  Q   P     ++L  
Sbjct: 69  GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 128

Query: 438 ELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
            L ++G +          ++ G  + D  C S  + GL    +V +A E+ + +   G  
Sbjct: 129 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P  V YN +I+G C+   +  A   F +M ++ + P   TYN LING CK+  I  A   
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L  M +    +P V T+ TLID     G+ +   ++ +EM+E G  PN +++ +++   C
Sbjct: 248 LMEM-QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  +   A+     M  K + P+  V+ A+I A++       AF ++++M
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 37/287 (12%)

Query: 416 LVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           ++R+M   G  P    +  ++I  + + G+  +A     +M +   LP+ + Y+  I G 
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           I    ++    L   +  HG  P+ + YN+++SGLC+A R+ E   L +EM ++ ++P  
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 535 ATYNLL-----------------------------------INGWCKSGNIDQAMLCLSR 559
            TY++L                                   +NG CK G +  A   L  
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ++      P  + Y TLI+G C  G  + A   + +M+ +   P+ IT+ ALI GLCK +
Sbjct: 181 LVNA-GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A      M++ G+ P +  F  LI A+         F VL EM
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 241/507 (47%), Gaps = 36/507 (7%)

Query: 118 DKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA----CELIERMDDCNIRLNEKT 172
           + A +VF+E+   G + D   +  ++V + + G V +A    CE++ER       ++  T
Sbjct: 226 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMER----GFVVDNAT 281

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
             ++I  F +KS V++A+  F K+TK G + +   Y  +I GLCK   ++ A +L  EM 
Sbjct: 282 LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 341

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            +G  P+    + LI           L K+ W +R           +   L+ + +    
Sbjct: 342 KNGWKPNVYTHTSLIHG---------LCKKGWTERAFR--------LFLKLIRSDNYKPN 384

Query: 293 YNLLQAMIKGEPIADVGVEMLMIF-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +   AMI G    +      M+F     +G V PNT+++  +I+   K G    A  L 
Sbjct: 385 VHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV-PNTNTYTTLIDGHCKAGNFSKAYELM 443

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M+  G   N   YN+++DGLC   R EE+++LL    ++  +    T   +    C+R
Sbjct: 444 ELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKR 503

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            D+  AL  + KM   G +P +   T LI   C+     ++ +   ++++ G  P    Y
Sbjct: 504 ADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETY 563

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++ I G    K+V LA++ F+ +  HGC PD ++Y  +ISGLCK  R+ EA  L++ MI 
Sbjct: 564 TSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 623

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KGL P   T   L   +CK+ +   AM+ L R+ +K      + T  TLI  LC   +  
Sbjct: 624 KGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW----IRTVHTLIRKLCCEKKVA 679

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITG 614
            A + ++++ +K    +R+T  A  T 
Sbjct: 680 LAALFFHKLLDKEVNVDRVTLAAFNTA 706



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 227/498 (45%), Gaps = 30/498 (6%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F++ G++ +A ++I  M +  + L  +    +I    +   V+ A  +FD+M+  G   D
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           +  Y  II G C+N  +  A +   EM   G   D   L+ +IT+  ++   +L+ + +W
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEK---SLVNRAVW 300

Query: 265 EDRDVNTMTLLCN-----SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
               V  M L  N     S++  L   GS+ QA+ LL+ M+K                  
Sbjct: 301 FFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN----------------G 344

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEES 378
             PN  +   +I+ L K G  + A  LF ++ +    + NV  Y  +I G C   +L  +
Sbjct: 345 WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA 404

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             L   M+E G  P   T  ++    C+  +   A  L+  M  +G  P       ++  
Sbjct: 405 EMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDG 464

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL--ALELFRDICAHGCC 496
           LCK G+A EAF+ L    Q     D V Y+  I      KR D+  AL     +   G  
Sbjct: 465 LCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE--QCKRADMNQALVFLNKMFKVGFQ 522

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD+  Y  +I+  C+   + ++E LF+E+I  GL P+  TY  +I G+C+   +  A+  
Sbjct: 523 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 582

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             +M +    +PD I+Y  LI GLC   R D+A  L++ M +KG +P  +T + L    C
Sbjct: 583 FQKMSD-HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYC 641

Query: 617 KCDRPRAALVHFRMMKEK 634
           K +   +A+V    + +K
Sbjct: 642 KTEDFASAMVILERLNKK 659



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 3/341 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +G V  N ++  +II    +   ++ A+  F ++T++G   N+  Y+++I GLC   
Sbjct: 270 MMERGFVVDN-ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 328

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHN 432
            +++++ELL EM ++G+KP  +T  S+   LC++     A  L  K+ R   ++P V   
Sbjct: 329 SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 388

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T +I   CK  K   A      M ++G +P+   Y+  I G         A EL   +  
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  P+   YN I+ GLCK  R  EA  L N      +     TY +LI+  CK  +++Q
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 508

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A++ L++M  K    PD+  YTTLI   C      D+  L++E+ + G AP + T+ ++I
Sbjct: 509 ALVFLNKMF-KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMI 567

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            G C+  +   A+  F+ M + G  PD   + ALIS    E
Sbjct: 568 CGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKE 608



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 2/312 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A ++F EM+  G   +   Y  +I G C +  + E+   + EM E GF   + TL  
Sbjct: 225 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTL 284

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C +  V  A+    K+   G  P + + + +I  LCK G   +AF  L +MV+ G
Sbjct: 285 IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 344

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           + P++  +++ I GL      + A  LF + I +    P+V  Y  +ISG CK ++++ A
Sbjct: 345 WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA 404

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           E LF  M  +GL+P+  TY  LI+G CK+GN  +A   L  ++  E   P+  TY +++D
Sbjct: 405 EMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE-LMELMSNEGFFPNTCTYNSIVD 463

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  GR ++A  L N   +     + +T+  LI+  CK      ALV    M + G +P
Sbjct: 464 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 523

Query: 639 DMFVFVALISAF 650
           D+ ++  LI+AF
Sbjct: 524 DIHLYTTLIAAF 535



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 223/524 (42%), Gaps = 59/524 (11%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           LVE A  +FD++   G+  P++ +Y  ++   C++ +V   +  + EM + G+  D  TL
Sbjct: 224 LVEYAGNVFDEMSARGV-YPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATL 282

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
           T ++  +C     ++A+  F+++   G     + +S ++    K G V +A EL+E M  
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 342

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLE 222
              + N  T   LIHG  KK   ++A +LF K+ +S  +  +   Y  +I G CK ++L 
Sbjct: 343 NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 402

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIM 280
            A  L+  MK  G+ P+    + LI      G  +   +  E+  +      T   NSI+
Sbjct: 403 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G  ++A+ LL    + +  AD GV               ++ I+I+   K   +
Sbjct: 463 DGLCKRGRAEEAFKLLNTGFQNQIEAD-GV---------------TYTILISEQCKRADM 506

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + AL    +M ++G   ++ LY  LI   C  N +++S +L  E+ + G  PT  T  SM
Sbjct: 507 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 566

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               CR + V  A+   +KM   G  P       LI  LCK  +  EA +    M+ +G 
Sbjct: 567 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 626

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P             ++ RV L  E                        CK +  A A  
Sbjct: 627 SP------------CEVTRVTLTYE-----------------------YCKTEDFASAMV 651

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +   +  K  I +V T   LI   C    +  A L   ++L+KE
Sbjct: 652 ILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKE 692



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 205/462 (44%), Gaps = 20/462 (4%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
             L  +I       LV  A   F +V + GL  PN  +Y+ ++  LCK  SV      L+
Sbjct: 280 ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS-PNLINYSSMISGLCKRGSVKQAFELLE 338

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKW 148
           EM   GW  + YT T L+   C  G  ++A  +F ++I  D+   + H ++ ++  + K 
Sbjct: 339 EMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKE 398

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            ++ +A  L ERM +  +  N  T+  LI G  K     KA +L + M+  GF  +   Y
Sbjct: 399 EKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 458

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + I+ GLCK  + E A +L +    +G     E         +D    T+L+ E  +  D
Sbjct: 459 NSIVDGLCKRGRAEEAFKLLN----TGFQNQIE---------ADGVTYTILISEQCKRAD 505

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +N   +  N + ++      I     L+ A  +   + D       + K  ++P   ++ 
Sbjct: 506 MNQALVFLNKMFKVGF-QPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYT 564

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I    ++ K+ LA+  F++M+  GC  +   Y  LI GLC  +RL+E+ +L   M + 
Sbjct: 565 SMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 624

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G  P   T  ++    C+ +D   A+ ++ ++     + W++    LI++LC   K   A
Sbjct: 625 GLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKKVALA 681

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             F   ++ +    D V  +A     I+  +  L  +L   I
Sbjct: 682 ALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERI 723



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 142/290 (48%)

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +L+E+ +++ +M   G   T   +N +       + V  A N+  +M  +G  P      
Sbjct: 189 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 248

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I   C++G  +EA R++ +M++ GF+ D    +  I    +   V+ A+  F  +   
Sbjct: 249 YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 308

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+++ Y+ +ISGLCK   V +A +L  EM+  G  P+V T+  LI+G CK G  ++A
Sbjct: 309 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 368

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                +++  ++  P+V TYT +I G C   +   A ML+  M+E+G  PN  T+  LI 
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 428

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           G CK      A     +M  +G  P+   + +++           AF++L
Sbjct: 429 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 478



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 1/153 (0%)

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ EA D+  +M  +GL+ +    N +I    +   ++ A      M       PD  TY
Sbjct: 189 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM-SARGVYPDSCTY 247

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +I G C  G   +A     EM E+G   +  T   +IT  C+      A+  F  + +
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G+ P++  + ++IS      +   AFE+L+EM
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 340


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 151/595 (25%), Positives = 269/595 (45%), Gaps = 55/595 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCK---SCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           A  +F+++KR     PN  + N L+ +L +   S S+ L    LK+    G   +  +  
Sbjct: 159 ATQIFNKMKRLNY-RPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFN 217

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+  YC   +   AL   N++ + G V + V ++ +L A  K   + +A +L+  M   
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  N+ T+ +L+ G+ +   + +A ++ + MT++        Y++++ G C + +++ A
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            ++  EM+   + PD    + LI  CS            W D                  
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQ-----------WRDSS---------------- 370

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                 + Y+L++ M K               KG V  N  +++II+  + K G +  A 
Sbjct: 371 ------EVYSLIEEMDK---------------KG-VKCNAVTYNIILKWMCKKGNMTEAT 408

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           +   +M + G   +   YN LI   C + ++ +++ ++ EM   G K   +TLN++  CL
Sbjct: 409 TTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCL 468

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C  + +  A NL+     +G+        +LI    K  K   A     +M +   +P  
Sbjct: 469 CVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPST 528

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           + Y++ IGGL   ++VD A++   ++  +G  PD   YNIII G C    V +A    NE
Sbjct: 529 ITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           MI     P V T N+L+ G C+ G +++A+   + ++ K     DV+TY T+I  LC  G
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK-GKDIDVVTYNTIISSLCKEG 647

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           + ++A  L  EME K   P++ T+  +I  L    R + A      M E G+  D
Sbjct: 648 KFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 234/518 (45%), Gaps = 87/518 (16%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  +F +LI+G+  +S+V  AL   +KM++ G   D   Y+ I+  L K + L+ A  L 
Sbjct: 212 NTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLL 271

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            +MK  G++P+    + L+      G    L+KE                ++ I+  N  
Sbjct: 272 LDMKSKGLSPNKHTYNMLVCGYCRLG----LLKE-------------ATKVIEIMTRN-- 312

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                NLL                         P   ++++++N    DGK+D A  +  
Sbjct: 313 -----NLL-------------------------PTVWTYNMLVNGFCNDGKIDEAFRIRD 342

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM ++  + +V  YN LIDG        E Y L+ EM++ G K    T N + + +C++ 
Sbjct: 343 EMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKG 402

Query: 409 DVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMV----------- 456
           ++  A   + KM   G  P  V +NT LI   CK GK  +AFR + +M            
Sbjct: 403 NMTEATTTLDKMEENGLSPDCVTYNT-LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 457 ------------------------QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
                                   + G++ D V Y   I G    ++ D AL L+ ++  
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKE 521

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P  + YN +I GLC++++V +A D  NEM+  GL+P   TYN++I+G+C  GN+++
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEK 581

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A    + M+E     PDV T   L+ GLC  G  + A+ L+N +  KG   + +T+  +I
Sbjct: 582 AFQFHNEMIE-NLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + LCK  +   A      M+ K + PD + +  +I+A 
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 220/528 (41%), Gaps = 86/528 (16%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+  F+   R  +  +L    T+        + D  IG   +  Q  +A Q++++MK   
Sbjct: 111 LLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLN 170

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV---SNGSIDQA 292
             P+                                  L CN++M  LV   S+ SI  A
Sbjct: 171 YRPNL---------------------------------LTCNTLMNSLVRYPSSSSILLA 197

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             +L+  IK      +GV           PNT+SF+I+I     + K+  AL    +M++
Sbjct: 198 RQVLKDSIK------LGV----------VPNTNSFNILIYGYCLESKVKDALDWVNKMSE 241

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC+ +   YN ++D L     L+E+ +LL +M+  G  P   T N +    CR   +  
Sbjct: 242 FGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKE 301

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  ++  M      P V    +L+   C  GK  EAFR   +M +   LPD+V Y+  I 
Sbjct: 302 ATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLID 361

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G    +       L  ++   G   + V YNII+  +CK   + EA    ++M   GL P
Sbjct: 362 GCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSP 421

Query: 533 SVATYNLLINGWCKSGNIDQAM------------------------LCLSRMLEKE---- 564
              TYN LI  +CK+G + +A                         LC+ + L++     
Sbjct: 422 DCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLL 481

Query: 565 -SGSP-----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            S S      D ++Y  LI G     + D A+ LW+EM+E+   P+ IT+ ++I GLC+ 
Sbjct: 482 CSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQS 541

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +   A+     M E G+ PD   +  +I  F  E N   AF+   EM
Sbjct: 542 RKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEM 589


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 242/530 (45%), Gaps = 25/530 (4%)

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKS 199
           L+ A++  G + KA ++ ER+ +    L E T C  L+   V++ R D A +L+D+M   
Sbjct: 139 LVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGE 198

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT-- 257
              +D     V++ GLC   ++E  L+L     G+G  P     + LI      G++   
Sbjct: 199 DSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 258

Query: 258 -LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            LL+ E           +     +  LV+ GS      L+  + K   +  +G   L + 
Sbjct: 259 LLLLGE-----------MEAKGFLPTLVTYGS------LINCLGKKGDLEKIGSLFLEMR 301

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K  +SPN   ++ +I+ L K      A+ + ++M   GC  ++  +N LI GLC+   + 
Sbjct: 302 KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 361

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++   LRE       P   +   +    C R +++ A +L+ +M  +GH P V     LI
Sbjct: 362 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALI 421

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             L   GK  EA      M +    PD+  Y+  I GL     +  A  +  ++      
Sbjct: 422 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQ 481

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD   Y  +I G  +++ + +A  +F  M  KG+ P + + N +I G+C+ G + +A+LC
Sbjct: 482 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILC 541

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           +S M  K    PD  TYTT+I G    G  + A+    +M ++ C PN +T+ +LI G C
Sbjct: 542 MSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 600

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE---LNPPLAFEVL 663
           K     +A   F  M+ + + P++  +  LI +   +   L   L FE +
Sbjct: 601 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 650



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 281/639 (43%), Gaps = 37/639 (5%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           LG L+      G++ +A  + ++++ +   +P     N LL+ L +    D       EM
Sbjct: 136 LGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 195

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEV 151
                G D Y+   L++  C  G+ ++ L +       G +   VF ++L+  + + G++
Sbjct: 196 LGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 255

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +   L+  M+         T+  LI+   KK  ++K   LF +M K G + +  +Y+ +
Sbjct: 256 GRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSV 315

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDV 269
           I  LCK      A+ +  +M  SG  PD    + LIT    EG +      + E   R++
Sbjct: 316 IDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 375

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           N   L    ++      G +  A +LL               M M+ +G  +P+  +F  
Sbjct: 376 NPNQLSYTPLIHGFCMRGELMAASDLL---------------MEMMGRGH-TPDVVTFGA 419

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ L+  GK+  AL +  +MT+     +V +YN LI GLC  + L  +  +L EM E  
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P  F   ++     R +++  A  +   M  +G  P +     +IK  C+ G   EA 
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 539

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +++M + G +PD   Y+  I G      ++ AL    D+    C P+VV Y+ +I+G 
Sbjct: 540 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 599

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           CK      AE LF  M  + L P+V TY +LI    K   + +A L    ML     SP+
Sbjct: 600 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC-SPN 658

Query: 570 VITYTTLIDGLC----------------IAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            +T   L++GL                 + G+ D  ++++ ++      P    + A+I 
Sbjct: 659 DVTLHYLVNGLTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIF 717

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            LC+ +  R AL     M +KG  P+   F++L+  F S
Sbjct: 718 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 756



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 220/551 (39%), Gaps = 40/551 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L   G VEE   L +     G C+P+   YN L++  C+   +    + L EM+  
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAG-CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAK 268

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G+     T   L+      G  +K  S+F E+   G      +++ ++ A  K     +A
Sbjct: 269 GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQA 328

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++++M       +  TF  LI G   +  V KA     +  +     +   Y  +I G
Sbjct: 329 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 388

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
            C   +L  A  L  EM G G TPD      LI      G+++  L+V+E   +R V   
Sbjct: 389 FCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 448

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAM-------------------IKGEPIADV-GVEM 312
             + N ++  L     +  A N+L+ M                   I+ E + D   +  
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M  KG V P+  S + +I    + G +  A+     M ++GC+ + F Y  +I G    
Sbjct: 509 FMEHKG-VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             L  +   L +M +   KP   T +S+    C+  D   A  L   M+ +   P V   
Sbjct: 568 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 627

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI---------------DI 477
           T+LI  L K  K + A  +   M+     P+ V     + GL                ++
Sbjct: 628 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 687

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              D  L +F+ +      P   AYN II  LC+   + EA D  N M  KG +P+  T+
Sbjct: 688 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 747

Query: 538 NLLINGWCKSG 548
             L+ G+C  G
Sbjct: 748 LSLLYGFCSVG 758



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 149/321 (46%), Gaps = 5/321 (1%)

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM--EESGFKPTHFTLNSMFRCLC 405
           R   Q G +  V   N L+  L    R +++ +L  EM  E+SG    +++   + R LC
Sbjct: 158 RLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSG--ADNYSTCVLVRGLC 215

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
               V   L L+      G  P V    +LI   C+ G        L +M  +GFLP +V
Sbjct: 216 LEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y + I  L     ++    LF ++   G  P+V  YN +I  LCK     +A  +  +M
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P + T+N LI G C  G++ +A   L   + +E  +P+ ++YT LI G C+ G 
Sbjct: 336 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL-NPNQLSYTPLIHGFCMRGE 394

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A  L  EM  +G  P+ +TF ALI GL    +   AL+    M E+ + PD+ ++  
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LIS    +   P A  +L+EM
Sbjct: 455 LISGLCKKHMLPAAKNILEEM 475



 Score = 39.3 bits (90), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 51/132 (38%)

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +D    M   G  P+ A    L+  +  +G + +A     R+ E+    P+V     L+ 
Sbjct: 118 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLK 177

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            L    R DDA  L++EM  +    +  +   L+ GLC   R    L         G  P
Sbjct: 178 LLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIP 237

Query: 639 DMFVFVALISAF 650
            +  +  LI  +
Sbjct: 238 HVVFYNVLIDGY 249


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 168/632 (26%), Positives = 278/632 (43%), Gaps = 43/632 (6%)

Query: 16  VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
            L +++V S  F      G ++  L   G + E  +L  ++ + G+ + NN SY  LL+A
Sbjct: 10  TLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNL-NNVSYTILLDA 68

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           L K+  V    M L  M   G  +D    T L+     SGQ  +A  +F  +     V  
Sbjct: 69  LFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPN 128

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           ++ +S L+    K G+++ A   +  M++ +   N  T+  LI+G+VK+  +  A ++  
Sbjct: 129 YITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLR 188

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           KM       +   Y +++ G  K    ++AL LYS+MK  G+  +  IL   + +    G
Sbjct: 189 KMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSG 248

Query: 255 ELTLLVKEIWEDRDVNTMTLLCN--SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            +    + + +         L N  ++M   + +G +  A NL Q M     + D+    
Sbjct: 249 RMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFN 308

Query: 313 LMI---FK---------------GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++I   FK                 +SP+ ++++ ++N   K G    AL L+ EM    
Sbjct: 309 VLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRK 368

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVG 412
            + N    N +I+GLC + R+E + ++L+EM   G  PT  T   +       RR D + 
Sbjct: 369 LIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTI- 427

Query: 413 ALNLVRKMRVQGHEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
                    +Q HE  V            +LI  LCK G   +A   L DM + G + D 
Sbjct: 428 ---------LQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADT 478

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+A I G      +  A   +  + +    PD+  YN+++ GL KA  + EA+DL +E
Sbjct: 479 TTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSE 538

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +  +GL+P+  TY  L+ G CK  N  + +     M+ K    P    Y  LI      G
Sbjct: 539 IKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIK-GFIPKPRAYNMLIGYFSKMG 597

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           +   A  L NEM+ KG +P   T+  LI G C
Sbjct: 598 KMKQAKELMNEMQTKGVSPTCTTYDILICGWC 629



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 36/438 (8%)

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCN 277
           LE AL LY EM GSGI PD      ++      G+L+   LL++E+ +      M +  N
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGK------MGMNLN 58

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDII-----I 331
           ++   +           LL A+ K   +A+  + +  MI +G      ++FD+I     I
Sbjct: 59  NVSYTI-----------LLDALFKAGKVAEALMTLACMIVRG------NNFDVIACTVLI 101

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K G++  A  LF  + Q+  + N   Y+ LIDG C    +  +   L EMEE    
Sbjct: 102 DGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCV 161

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T +S+     ++  +  A  ++RKM  +   P +    +L+    K G    A   
Sbjct: 162 PNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDL 221

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
            + M Q G   ++    A +  +    R++ A EL   + + G  PD+V Y  ++ G  K
Sbjct: 222 YSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLK 281

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDV 570
           + +V+ A +L  EM +K ++  + T+N+LIN   K G  D   +  S M  +E G SPD+
Sbjct: 282 SGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESI-YSAM--REMGLSPDL 338

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TY T+++G    G    A+ LWNEM+ +   PN IT   +I GLC+  R   A+   + 
Sbjct: 339 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 398

Query: 631 MKEKGMKPDMFVFVALIS 648
           M   G+ P    +  L++
Sbjct: 399 MVLMGLYPTSTTYRILLN 416



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 147/633 (23%), Positives = 264/633 (41%), Gaps = 79/633 (12%)

Query: 5   LSRARRIA-PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           L +A ++A  L  LA  +V+   F    A   LI  L   G ++EA  LF  + +  L V
Sbjct: 69  LFKAGKVAEALMTLACMIVRGNNF-DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL-V 126

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +Y+ L++  CK   ++  E  L EM++     +  T + L+  Y   G    A  V
Sbjct: 127 PNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 186

Query: 124 FNEIIDH-------------------GWVD---------------EHVFSILLVAF---- 145
             +++                     GW D               ++VF  +L AF    
Sbjct: 187 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF--ILDAFVNNM 244

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            + G +++A EL+ +M    ++ +   +  L+ GF+K  +V  AL L  +MT      D 
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             ++V+I  L K  + +    +YS M+  G++PD    + ++     +G  T  + E+W 
Sbjct: 305 VTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSAL-ELWN 362

Query: 266 D---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIFKGTV 320
           +   R +    + CN ++  L   G ++ A ++L+ M+     P +     +L I   + 
Sbjct: 363 EMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSR 422

Query: 321 SPNT-----------------SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
             +T                   ++I+I+ L K G    A ++ ++M + G + +   YN
Sbjct: 423 RADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYN 482

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI G C S+ L+ ++     M      P   T N +   L +   +  A +L+ +++ +
Sbjct: 483 ALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKR 542

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       L+   CK     E  R   +MV +GF+P    Y+  IG    + ++  A
Sbjct: 543 GLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQA 602

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLC------------KAQRVAEAEDLFNEMITKGLI 531
            EL  ++   G  P    Y+I+I G C            K    AEA+ LF EM  +G +
Sbjct: 603 KELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFV 662

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           P  +T   + + +   G    A + L    +++
Sbjct: 663 PCESTQACISSTFAAPGKKADARMLLKSTYKRK 695



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 165/361 (45%), Gaps = 35/361 (9%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L+ AL+L+ EM   G   +V  + +++ GLC   +L E   LLREM + G    + +   
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L +   V  AL  +  M V+G+   V   T+LI  L K G+  EA     ++ Q  
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +P+ + YSA I G   +  ++ A     ++    C P+V+ Y+ +I+G  K   + +A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE----------------- 562
            +  +M+ K  +P++ TY +L++G  K+G  D A+   S+M +                 
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 563 KESG-----------------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K SG                  PD++ YT L+DG   +G+   A+ L  EM  K    + 
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +TF  LI  L K  +     + +  M+E G+ PD+  +  +++    + N   A E+  E
Sbjct: 305 VTFNVLINCLFKLGKSDTESI-YSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 666 M 666
           M
Sbjct: 364 M 364



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 1/294 (0%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N LEE+  L  EM  SG  P   T  S+   LC+   +     L+R+M   G        
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T+L+  L K GK  EA   L  M+  G   D++  +  I GL    ++  A  LF ++  
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P+ + Y+ +I G CK   +  AE   +EM  K  +P+V TY+ LING+ K G +  
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A   L +M+ K +  P++ TY  L+DG   AG  D A+ L+++M++ G   N     A +
Sbjct: 183 AFKVLRKMVHKNA-MPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             + +  R   A      M   G+KPD+  +  L+  FL       A  + +EM
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 295


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 220/480 (45%), Gaps = 39/480 (8%)

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L +  + GE+D+A  L+        R +  T   LI       R  +A ++      +  
Sbjct: 72  LRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVL-----AAC 122

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---L 258
             D   Y+ ++ G C   QL+ A +L +EM    + PD    + LI      G       
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 259 LVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
           ++ E+   R   DV T T+L  +  +         QA  LL  M       D G      
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCK----RSGYKQAMKLLDEM------RDKGC----- 224

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                +P+  ++++++N + ++G++D A+   + +   GC  N   YN ++ GLC + R 
Sbjct: 225 -----TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 279

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           E++ EL+ EM + G  P   T N +   LCR+  V  AL ++ ++   G  P       L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   CK  K  +A  FL  MV  G  PDIV Y+  +  L     VD+A+EL   +   GC
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P +++YN +I GL KA +  EA +L NEM++KGL P + TY+ +  G C+   I+ A+ 
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              + ++     P+ + Y  +I GLC       AI L+  M   GC PN  T+  LI GL
Sbjct: 460 AFGK-VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 215/433 (49%), Gaps = 27/433 (6%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L +  +L+ AL+L     GS   PD    + LI   S  G          E R       
Sbjct: 75  LVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTA-------EAR------- 116

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                 R+L + G    AYN + A   G    D    +  + +  V P+  +++ +I  L
Sbjct: 117 ------RVLAACGPDVMAYNAMVAGYCGAGQLDAARRL--VAEMPVEPDAYTYNTLIRGL 168

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G+   AL++  EM +  C+ +V  Y  L++  C  +  +++ +LL EM + G  P  
Sbjct: 169 CGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI 228

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +   +C+   V  A+  ++ +   G EP      +++K LC   +  +A   + +
Sbjct: 229 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 288

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M Q+G  P++V ++  I  L     V+ ALE+   I  +GC P+ ++YN ++   CK ++
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A    + M+++G  P + +YN L+   C+SG +D A+  L ++ +K   +P +I+Y 
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC-APVLISYN 407

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T+IDGL  AG+  +A+ L NEM  KG  P+ IT+  +  GLC+ DR   A+  F  +++ 
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467

Query: 635 GMKPDMFVFVALI 647
           G++P+  ++ A+I
Sbjct: 468 GIRPNTVLYNAII 480



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 180/356 (50%), Gaps = 9/356 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           E L +      P+  +   +I  L   G+   A  +        C  +V  YN ++ G C
Sbjct: 83  EALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMVAGYC 137

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            + +L+ +  L+ EM     +P  +T N++ R LC R     AL ++ +M  +   P V 
Sbjct: 138 GAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVV 194

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T+L++  CK     +A + L +M  +G  PDIV Y+  + G+    RVD A+E  +++
Sbjct: 195 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 254

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            ++GC P+ V+YNI++ GLC A+R  +AE+L  EM  KG  P+V T+N+LI+  C+ G +
Sbjct: 255 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 314

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           + A+  L + + K   +P+ ++Y  L+   C   + D A+   + M  +GC P+ +++  
Sbjct: 315 EPALEVLEQ-IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+T LC+      A+     +K+KG  P +  +  +I           A E+L EM
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 208/455 (45%), Gaps = 23/455 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D  T   L++    SG+  +A  V          D   ++ ++  +   G++D A  L+ 
Sbjct: 95  DAGTCAALIKKLSASGRTAEARRVLAAC----GPDVMAYNAMVAGYCGAGQLDAARRLVA 150

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M    +  +  T+  LI G   + R   AL + D+M +     D   Y +++   CK  
Sbjct: 151 EMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             + A++L  EM+  G TPD    + ++     EG +   ++ +   +++ +     N++
Sbjct: 208 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL---KNLPSYGCEPNTV 264

Query: 280 MRILVSNGSIDQAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                       +YN+ L+ +   E   D    M  + +    PN  +F+++I+ L + G
Sbjct: 265 ------------SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 312

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            ++ AL +  ++ + GC  N   YN L+   C   +++++   L  M   G  P   + N
Sbjct: 313 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 372

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LCR  +V  A+ L+ +++ +G  P +     +I  L K GK  EA   L +MV +
Sbjct: 373 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 432

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PDI+ YS    GL    R++ A+  F  +   G  P+ V YN II GLCK +    A
Sbjct: 433 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 492

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            DLF  MI  G +P+ +TY +LI G    G I +A
Sbjct: 493 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 221/502 (44%), Gaps = 59/502 (11%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    LI+ L + G   EA  +         C P+  +YN ++   C +  +D     + 
Sbjct: 97  GTCAALIKKLSASGRTAEARRVL------AACGPDVMAYNAMVAGYCGAGQLDAARRLVA 150

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           EM       D YT   L++  C  G+   AL+V +E++    V + V ++ILL A  K  
Sbjct: 151 EMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
              +A +L++ M D     +  T+ V+++G  ++ RVD A++    +   G   +   Y+
Sbjct: 208 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 267

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +++ GLC  ++ E A +L  EM   G  P+    + LI+                     
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS--------------------- 306

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                        L   G ++ A  +L+                 I K   +PN+ S++ 
Sbjct: 307 ------------FLCRKGLVEPALEVLE----------------QIPKYGCTPNSLSYNP 338

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++   K  K+D A++    M   GC  ++  YN L+  LC S  ++ + ELL ++++ G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   + N++   L +      AL L+ +M  +G +P +   + +   LC+  +  +A 
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R    +   G  P+ V Y+A I GL   +    A++LF  +  +GC P+   Y I+I GL
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518

Query: 510 CKAQRVAEAEDLFNEMITKGLI 531
                + EA DL +E+ ++G++
Sbjct: 519 AYEGLIKEARDLLDELCSRGVV 540



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 13/336 (3%)

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           + +L++ G+LD AL L     +     +      LI  L  S R  E+  +L     +  
Sbjct: 72  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AAC 122

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N+M    C    +  A  LV +M V   EP       LI+ LC  G+   A  
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALA 179

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M++   +PD+V Y+  +           A++L  ++   GC PD+V YN++++G+C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +  RV +A +    + + G  P+  +YN+++ G C +   + A   +  M +K    P+V
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC-PPNV 298

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +T+  LI  LC  G  + A+ +  ++ + GC PN +++  L+   CK  +   A+    +
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M  +G  PD+  +  L++A        +A E+L ++
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 169/683 (24%), Positives = 293/683 (42%), Gaps = 60/683 (8%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           M P     L+       +V E+  L+  +K++G+ +P+  S N  LE+L  +   +    
Sbjct: 110 MKPLFSDMLLSICSESKMVSESAELYMLMKKDGV-LPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAF 145
              E+ + G   D++     +Q     G   +A+ +    +  G V   VF  ++++   
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMT-CMKRGGVSPGVFVYNVVIGGL 227

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K   +  A +L + M D  +  N  T+  LI G+ K  ++++A  + ++M         
Sbjct: 228 CKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTI 287

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEI 263
             ++ ++ GLC+ + +E A ++  EM+  G  PD    + L       G +  ++ + E 
Sbjct: 288 ITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEE 347

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG----- 318
              + V  +   C+ ++  L   G++++A  +L+  ++   +A VGV    I  G     
Sbjct: 348 AVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN-GLAPVGVFFNTIVNGYCQVG 406

Query: 319 ---------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                           + PN  +++ ++    +   ++ A    ++M + G + NV  YN
Sbjct: 407 DINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYN 466

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LIDG   S   +  +++L EME+ G KP   +   +  CLC+  +++ A  ++  M  +
Sbjct: 467 TLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR 526

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P  +   +LI   C  GK  +AFRF  +MV    +P +V Y+  I GL    +V  A
Sbjct: 527 GVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEA 586

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             L  +I   G   DV+ YN +ISG   A  V +A +L+  M   G+ P++ TY+ LI G
Sbjct: 587 ENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG 646

Query: 544 WCKSG-----NIDQAML----------------------------CLSRMLEKESGSPDV 570
             K G      I Q ML                             L   +E +   PD 
Sbjct: 647 CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDK 706

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY  LI G    GR      L N+M+ +G  P   T+  LI G CK      A V +R 
Sbjct: 707 MTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYRE 766

Query: 631 MKEKGMKPDMFVFVALISAFLSE 653
           M E G  P + +   LI+    E
Sbjct: 767 MFENGFTPSVSICDNLITGLREE 789



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 275/597 (46%), Gaps = 41/597 (6%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
           RR+AP R+    ++   C                VG +EEA  + +++K E +  P   +
Sbjct: 246 RRVAPNRITYNTLIDGYC---------------KVGQLEEAFNIRERMKVENV-EPTIIT 289

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           +N LL  LC++  ++  +  L+EM+ YG+  D++T T L   +   G  D ++++  E +
Sbjct: 290 FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAV 349

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             G  + ++  SILL A  K G ++KA E++++  +  +      F  +++G+ +   ++
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           KA    +KM   G   +   Y+ ++   C+ K +E A +   +M   G+ P+ E  + LI
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 248 ----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                SC  +    +L  E  E + +    +    ++  L  + +I +A      +I G+
Sbjct: 470 DGYGRSCLFDRCFQIL--EEMEKKGLKPNVISYGCLINCLCKDANILEA-----EVILGD 522

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                     M+ +G V PN   ++++I+     GKL  A   F EM     +  +  YN
Sbjct: 523 ----------MVHRGVV-PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI+GLC   ++ E+  L  E+   G      T NS+        +V  AL L   M+  
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P +     LI    K G  +   +   +M+Q   +PD V Y+A I   ++   V  A
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA 690

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             L   + A G  PD + YN +I G  K  R+ + ++L N+M  +GLIP   TY++LI G
Sbjct: 691 CSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            CK  + D A +    M E    +P V     LI GL   GR  DA ++ +EM  KG
Sbjct: 751 HCKLKDFDGAYVWYREMFEN-GFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 232/517 (44%), Gaps = 52/517 (10%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V ++ +L+  M K G     A  ++ +  L   K+ E  LQL+SE+  SG+ PD  +  K
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEP 304
            I +    G+L          R +  MT +     R  VS G     YN+ +  + K + 
Sbjct: 188 AIQAAVKLGDL---------KRAIELMTCM----KRGGVSPGVF--VYNVVIGGLCKEKR 232

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           + D       +    V+PN  +++ +I+   K G+L+ A ++   M        +  +N+
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L++GLC +  +EE+  +L EME  GF P  FT  ++F    +  +V  ++ L  +   +G
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +      ++L+  LCK G   +A   L   ++ G  P  V ++  + G   +  ++ A 
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
                + A G  P+ V YN ++   C+ + + EAE    +M+ KG++P+V TYN LI+G+
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472

Query: 545 -----------------------------------CKSGNIDQAMLCLSRMLEKESGSPD 569
                                              CK  NI +A + L  M+ +    P+
Sbjct: 473 GRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHR-GVVPN 531

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
              Y  LIDG CIAG+  DA   ++EM  +   P  +T+  LI GLCK  +   A     
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  KG+  D+  + +LIS + S  N   A E+ + M
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 224/499 (44%), Gaps = 51/499 (10%)

Query: 177 IHGFVKKSRVDKALQLFDKM--TKSGFASDAAMYDVIIGGLCKNKQL--EMALQLYSEMK 232
           +   +++ R + A +L   M   KS F+S + +Y +        K L  +M L + SE  
Sbjct: 67  LQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSE-- 124

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
                      SK++   S+  EL +L+K+      V ++ L   S    LVS    +  
Sbjct: 125 -----------SKMV---SESAELYMLMKKDGVLPSVASLNLFLES----LVSTKRYEDT 166

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   +++                  + P+   +   I   +K G L  A+ L   M +
Sbjct: 167 LQLFSEIVES----------------GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKR 210

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G    VF+YN +I GLC   R++++ +L  EM +    P   T N++    C+   +  
Sbjct: 211 GGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEE 270

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A N+  +M+V+  EP +     L+  LC+     EA R L +M   GF+PD   Y+    
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD 330

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAY--NIIISGLCKAQRVAEAEDLFNEMITKGL 530
           G +    VD ++ L  +    G    ++ Y  +I+++ LCK   + +AE++  + +  GL
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGV--QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGL 388

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P    +N ++NG+C+ G+I++A   + +M E     P+ +TY +L+   C     ++A 
Sbjct: 389 APVGVFFNTIVNGYCQVGDINKAYTTIEKM-EAVGLRPNHVTYNSLVKKFCEMKNMEEAE 447

Query: 591 MLWNEMEEKGCAPNRITFMALITGL---CKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
               +M EKG  PN  T+  LI G    C  DR    L     M++KG+KP++  +  LI
Sbjct: 448 KCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL---EEMEKKGLKPNVISYGCLI 504

Query: 648 SAFLSELNPPLAFEVLKEM 666
           +    + N   A  +L +M
Sbjct: 505 NCLCKDANILEAEVILGDM 523


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 237/525 (45%), Gaps = 53/525 (10%)

Query: 114 SGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           + Q+  ALS+  ++  +G   + +  ++L+  FS+ G +  +  +  ++       +  T
Sbjct: 71  AKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVT 130

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F +LI G   K  V KAL   DK+   GF  D   Y  +I GLC+  + + A+QL   + 
Sbjct: 131 FTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD 190

Query: 233 GSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           G  + P+  + S +I S C D+                                   ++ 
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDK----------------------------------LVND 216

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A++L   M+                   +SP+  ++  +I+     GKL  A+ LF  M 
Sbjct: 217 AFDLYCEMVSKR----------------ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
                 NV+ ++ LIDG C   ++ E+  +L  M +   K    T NS+    C  + V 
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A +L   M  +G  P V   +++I   CK     EA +   +M  +   P++V Y++ +
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL    R   ALEL  ++   G   +++ YN I+  +CK   V +A  L  ++  KG+ 
Sbjct: 381 DGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQ 440

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + TY +LING CK G +D A      +L K   SP++ TYT+LI+G C  G  D+ + 
Sbjct: 441 PDIFTYTVLINGLCKVGRLDDAQKVFEDLLVK-GYSPNIYTYTSLINGFCNKGFFDEGLA 499

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + ++M++ GC PN IT+  LI  L + D    A    R M  +G+
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 240/500 (48%), Gaps = 29/500 (5%)

Query: 192 LFDKM-TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           LF+++  K+     A  +  I+G L K KQ + AL L  +M+ +GI PDF   + L+   
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 251 SDEGELTL-------LVKEIWEDRDVNTMTLLCNSIM-------------RILVSNGSID 290
           S  G +         ++K+ +   D  T T+L   +              +++     +D
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHP-DAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLD 162

Query: 291 QAY--NLLQAMIK-GEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSL 346
           Q     L+  + + GE  A   V++L    G  V PN   +  II+++ KD  ++ A  L
Sbjct: 163 QVSYGTLINGLCRVGETKA--AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDL 220

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           + EM       +V  Y++LI G C   +L+ + +L   M      P  +T + +    C+
Sbjct: 221 YCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCK 280

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A N++  M  +  +  V     L+   C   +  +A      M Q G  PD+  
Sbjct: 281 EGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YS  I G   IK VD A++LF ++      P+VV YN ++ GLCK+ R + A +L +EM 
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMH 400

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            +G   ++ TYN +++  CK+ ++D+A++ L+++ EK    PD+ TYT LI+GLC  GR 
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK-GIQPDIFTYTVLINGLCKVGRL 459

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           DDA  ++ ++  KG +PN  T+ +LI G C        L     MK+ G  P+   +  L
Sbjct: 460 DDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEIL 519

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I +   +     A ++L+EM
Sbjct: 520 IHSLFEKDENDKAEKLLREM 539



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 216/437 (49%), Gaps = 15/437 (3%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G+  D  T T L++  C  G+  KAL   ++++  G+ +D+  +  L+    + GE   A
Sbjct: 123 GYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAA 182

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+ R+D   +R N   +  +I    K   V+ A  L+ +M     + D   Y  +I G
Sbjct: 183 VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   +L+ A+ L++ M    I P+    S LI     EG+       + E ++V  + +
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK-------VREAKNVLAVMM 295

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N  + ++  N  +D  Y L++ + K + + +V     M  +G V+P+  S+ I+IN  
Sbjct: 296 KKNVKLDVVTYNSLMD-GYCLVKQVNKAKSLFNV-----MAQRG-VTPDVWSYSIMINGF 348

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   +D A+ LF EM       NV  YN+L+DGLC S R   + EL+ EM + G     
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T NS+   +C+   V  A+ L+ K++ +G +P +   T+LI  LCK G+  +A +   D
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           ++ +G+ P+I  Y++ I G  +    D  L +   +  +GC P+ + Y I+I  L +   
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528

Query: 515 VAEAEDLFNEMITKGLI 531
             +AE L  EMI +GL+
Sbjct: 529 NDKAEKLLREMIARGLL 545



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 166/384 (43%), Gaps = 68/384 (17%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           ++RI+P      DVV     +S    GF +     VG ++ A  LF+++  + +  PN Y
Sbjct: 226 SKRISP------DVVTYSSLIS----GFCV-----VGKLKYAVDLFNRMISDNIN-PNVY 269

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +++ L++  CK   V   +  L  M       D  T   L+  YC   Q +KA S+FN +
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM 329

Query: 128 IDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G   D   +SI++  F K   VD+A +L E M    I  N  T+  L+ G  K  R 
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT 389

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             AL+L D+M   G  S+   Y+ I+  +CKN  ++ A+ L +++K  GI P        
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP-------- 441

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ-AMIKGEPI 305
                                D+ T T+L N + ++    G +D A  + +  ++KG   
Sbjct: 442 ---------------------DIFTYTVLINGLCKV----GRLDDAQKVFEDLLVKG--- 473

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                          SPN  ++  +IN     G  D  L++  +M   GC+ N   Y  L
Sbjct: 474 --------------YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEIL 519

Query: 366 IDGLCNSNRLEESYELLREMEESG 389
           I  L   +  +++ +LLREM   G
Sbjct: 520 IHSLFEKDENDKAEKLLREMIARG 543



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 10/210 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK----SCSVDLVEM 87
           +   +I     + +V+EA  LF+++  + +  PN  +YN L++ LCK    SC+++LV+ 
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLFEEMHCKQI-FPNVVTYNSLVDGLCKSGRTSCALELVD- 397

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFS 146
              EM D G   +  T   +L   C +   DKA+ +  +I + G   D   +++L+    
Sbjct: 398 ---EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLC 454

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G +D A ++ E +       N  T+  LI+GF  K   D+ L +  KM  +G   +A 
Sbjct: 455 KVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAI 514

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
            Y+++I  L +  + + A +L  EM   G+
Sbjct: 515 TYEILIHSLFEKDENDKAEKLLREMIARGL 544


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 243/511 (47%), Gaps = 36/511 (7%)

Query: 120  ALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA----CELIERMDDCNIRLNEKTFC 174
            A +VF+E+   G + D   +  ++V + + G V +A    CE++ER       ++  T  
Sbjct: 815  AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMER----GFVVDNATLT 870

Query: 175  VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            ++I  F +KS V++A+  F K+TK G + +   Y  +I GLCK   ++ A +L  EM  +
Sbjct: 871  LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 930

Query: 235  GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            G  P+    + LI           L K+ W +R           +   L+ + +     +
Sbjct: 931  GWKPNVYTHTSLIHG---------LCKKGWTERAFR--------LFLKLIRSDNYKPNVH 973

Query: 295  LLQAMIKGEPIADVGVEMLMIF-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
               AMI G    +      M+F     +G V PNT+++  +I+   K G    A  L   
Sbjct: 974  TYTAMISGYCKEEKLSRAEMLFERMKEQGLV-PNTNTYTTLIDGHCKAGNFSKAYELMEL 1032

Query: 350  MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
            M+  G   N   YN+++DGLC   R EE+++LL    ++  +    T   +    C+R D
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 1092

Query: 410  VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
            +  AL  + KM   G +P +   T LI   C+     ++ +   ++++ G  P    Y++
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 1152

Query: 470  AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
             I G    K+V LA++ F+ +  HGC PD ++Y  +ISGLCK  R+ EA  L++ MI KG
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212

Query: 530  LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            L P   T   L   +CK+ +   AM+ L R+ +K      + T  TLI  LC   +   A
Sbjct: 1213 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW----IRTVHTLIRKLCCEKKVALA 1268

Query: 590  IMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             + ++++ +K    +R+T  A  T   + ++
Sbjct: 1269 ALFFHKLLDKEVNVDRVTLAAFNTACIESNK 1299



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 230/507 (45%), Gaps = 32/507 (6%)

Query: 137  VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            V   ++  F++ G++ +A ++I  M +  + L  +    +I    +   V+ A  +FD+M
Sbjct: 763  VVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM 822

Query: 197  TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGE 255
            +  G   D+  Y  II G C+N  +  A +   EM   G   D   L+ +IT+ C    E
Sbjct: 823  SARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC----E 878

Query: 256  LTLLVKEIWEDRDVNTMTLLCN-----SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             +L+ + +W    V  M L  N     S++  L   GS+ QA+ LL+ M+K         
Sbjct: 879  KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN-------- 930

Query: 311  EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGL 369
                       PN  +   +I+ L K G  + A  LF ++ +    + NV  Y  +I G 
Sbjct: 931  --------GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGY 982

Query: 370  CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
            C   +L  +  L   M+E G  P   T  ++    C+  +   A  L+  M  +G  P  
Sbjct: 983  CKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNT 1042

Query: 430  KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL--ALELF 487
                 ++  LCK G+A EAF+ L    Q     D V Y+  I      KR D+  AL   
Sbjct: 1043 CTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE--QCKRADMNQALVFL 1100

Query: 488  RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
              +   G  PD+  Y  +I+  C+   + ++E LF+E+I  GL P+  TY  +I G+C+ 
Sbjct: 1101 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 1160

Query: 548  GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
              +  A+    +M +    +PD I+Y  LI GLC   R D+A  L++ M +KG +P  +T
Sbjct: 1161 KKVSLAVKFFQKMSD-HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVT 1219

Query: 608  FMALITGLCKCDRPRAALVHFRMMKEK 634
             + L    CK +   +A+V    + +K
Sbjct: 1220 RVTLTYEYCKTEDFASAMVILERLNKK 1246



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 3/341 (0%)

Query: 314  MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            M+ +G V  N ++  +II    +   ++ A+  F ++T++G   N+  Y+++I GLC   
Sbjct: 857  MMERGFVVDN-ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 915

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHN 432
             +++++ELL EM ++G+KP  +T  S+   LC++     A  L  K+ R   ++P V   
Sbjct: 916  SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 975

Query: 433  TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            T +I   CK  K   A      M ++G +P+   Y+  I G         A EL   +  
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 493  HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             G  P+   YN I+ GLCK  R  EA  L N      +     TY +LI+  CK  +++Q
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 1095

Query: 553  AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            A++ L++M  K    PD+  YTTLI   C      D+  L++E+ + G AP + T+ ++I
Sbjct: 1096 ALVFLNKMF-KVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMI 1154

Query: 613  TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             G C+  +   A+  F+ M + G  PD   + ALIS    E
Sbjct: 1155 CGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKE 1195



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 161/312 (51%), Gaps = 2/312 (0%)

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            ++ A ++F EM+  G   +   Y  +I G C +  + E+   + EM E GF   + TL  
Sbjct: 812  VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTL 871

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            +    C +  V  A+    K+   G  P + + + +I  LCK G   +AF  L +MV+ G
Sbjct: 872  IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 931

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
            + P++  +++ I GL      + A  LF + I +    P+V  Y  +ISG CK ++++ A
Sbjct: 932  WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA 991

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            E LF  M  +GL+P+  TY  LI+G CK+GN  +A   L  ++  E   P+  TY +++D
Sbjct: 992  EMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE-LMELMSNEGFFPNTCTYNSIVD 1050

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            GLC  GR ++A  L N   +     + +T+  LI+  CK      ALV    M + G +P
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110

Query: 639  DMFVFVALISAF 650
            D+ ++  LI+AF
Sbjct: 1111 DIHLYTTLIAAF 1122



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 223/524 (42%), Gaps = 59/524 (11%)

Query: 45   LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
            LVE A  +FD++   G+  P++ +Y  ++   C++ +V   +  + EM + G+  D  TL
Sbjct: 811  LVEYAGNVFDEMSARGV-YPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATL 869

Query: 105  TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
            T ++  +C     ++A+  F+++   G     + +S ++    K G V +A EL+E M  
Sbjct: 870  TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 929

Query: 164  CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLE 222
               + N  T   LIHG  KK   ++A +LF K+ +S  +  +   Y  +I G CK ++L 
Sbjct: 930  NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 989

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIM 280
             A  L+  MK  G+ P+    + LI      G  +   +  E+  +      T   NSI+
Sbjct: 990  RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049

Query: 281  RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              L   G  ++A+ LL    + +  AD GV               ++ I+I+   K   +
Sbjct: 1050 DGLCKRGRAEEAFKLLNTGFQNQIEAD-GV---------------TYTILISEQCKRADM 1093

Query: 341  DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
            + AL    +M ++G   ++ LY  LI   C  N +++S +L  E+ + G  PT  T  SM
Sbjct: 1094 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 1153

Query: 401  FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                CR + V  A+   +KM   G  P       LI  LCK  +  EA +    M+ +G 
Sbjct: 1154 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 1213

Query: 461  LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             P             ++ RV L  E                        CK +  A A  
Sbjct: 1214 SP------------CEVTRVTLTYE-----------------------YCKTEDFASAMV 1238

Query: 521  LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            +   +  K  I +V T   LI   C    +  A L   ++L+KE
Sbjct: 1239 ILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKE 1279



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 205/462 (44%), Gaps = 20/462 (4%)

Query: 31   GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
              L  +I       LV  A   F +V + GL  PN  +Y+ ++  LCK  SV      L+
Sbjct: 867  ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS-PNLINYSSMISGLCKRGSVKQAFELLE 925

Query: 91   EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKW 148
            EM   GW  + YT T L+   C  G  ++A  +F ++I  D+   + H ++ ++  + K 
Sbjct: 926  EMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKE 985

Query: 149  GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             ++ +A  L ERM +  +  N  T+  LI G  K     KA +L + M+  GF  +   Y
Sbjct: 986  EKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 1045

Query: 209  DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
            + I+ GLCK  + E A +L +    +G     E         +D    T+L+ E  +  D
Sbjct: 1046 NSIVDGLCKRGRAEEAFKLLN----TGFQNQIE---------ADGVTYTILISEQCKRAD 1092

Query: 269  VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
            +N   +  N + ++      I     L+ A  +   + D       + K  ++P   ++ 
Sbjct: 1093 MNQALVFLNKMFKVGF-QPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYT 1151

Query: 329  IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
             +I    ++ K+ LA+  F++M+  GC  +   Y  LI GLC  +RL+E+ +L   M + 
Sbjct: 1152 SMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDK 1211

Query: 389  GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
            G  P   T  ++    C+ +D   A+ ++ ++     + W++    LI++LC   K   A
Sbjct: 1212 GLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIRTVHTLIRKLCCEKKVALA 1268

Query: 449  FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              F   ++ +    D V  +A     I+  +  L  +L   I
Sbjct: 1269 ALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERI 1310



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 142/290 (48%)

Query: 374  RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            +L+E+ +++ +M   G   T   +N +       + V  A N+  +M  +G  P      
Sbjct: 776  KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 835

Query: 434  LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             +I   C++G  +EA R++ +M++ GF+ D    +  I    +   V+ A+  F  +   
Sbjct: 836  YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 895

Query: 494  GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            G  P+++ Y+ +ISGLCK   V +A +L  EM+  G  P+V T+  LI+G CK G  ++A
Sbjct: 896  GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 955

Query: 554  MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 +++  ++  P+V TYT +I G C   +   A ML+  M+E+G  PN  T+  LI 
Sbjct: 956  FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 1015

Query: 614  GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
            G CK      A     +M  +G  P+   + +++           AF++L
Sbjct: 1016 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 1065



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 1/153 (0%)

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ EA D+  +M  +GL+ +    N +I    +   ++ A      M  +    PD  TY
Sbjct: 776 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSAR-GVYPDSCTY 834

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +I G C  G   +A     EM E+G   +  T   +IT  C+      A+  F  + +
Sbjct: 835 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G+ P++  + ++IS      +   AFE+L+EM
Sbjct: 895 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/653 (24%), Positives = 283/653 (43%), Gaps = 61/653 (9%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           L  L++    VG+ +EA     Q KR G  VP+  S N L+  L +   +D+     + +
Sbjct: 160 LDMLVKAYVRVGMFDEAIDALFQTKRRGF-VPHIMSCNFLMNRLIEHGKIDMAVAIYRHL 218

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEV 151
           +  G   + YT    ++  C  G F++A+ VF E+ + G     V  S  +         
Sbjct: 219 KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRS 278

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D   E +  +   N  ++   +  +I GF  + ++ +A  +F  M   G A D  +Y  +
Sbjct: 279 DLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGAL 338

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I   CK   L  A+ L+++M  +GI  +  I+S ++    + G  + +V +  E RD   
Sbjct: 339 IHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGI 398

Query: 272 M--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT---------- 319
               +L N ++  L   G +++A  LL  M KG  ++   V    +  G           
Sbjct: 399 FLDEVLYNIVVDALCKLGKVEEAVELLNEM-KGRRMSLDVVHYTTLIAGYCLQGKLVDAK 457

Query: 320 ----------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                     + P+  +++I++    ++G    AL L   +   G   N   +N +I+GL
Sbjct: 458 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 517

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C + +++E+   L  +E+   +      ++M    C+      A  L  ++  QG     
Sbjct: 518 CMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKK 573

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI---DIKRVDLALEL 486
           K    L+  LC  G+  +A   L  M+     P+ + Y   IG      D+KR  L  ++
Sbjct: 574 KSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDM 633

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              +   G  PDV+ Y ++I+G C+   + EA D+FN+M  +G+ P V TY ++++G  K
Sbjct: 634 ---LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 690

Query: 547 SGNIDQAMLCLSRMLEKESGS--------------------PDVITYTTLIDGLCIAGRP 586
                   L ++R L+   GS                    PDV+ YT LID  C     
Sbjct: 691 VN------LKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNL 744

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            DAI L++EM  +G  P+ +T+ AL++  C       A+     M  KG++PD
Sbjct: 745 QDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPD 797



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 270/618 (43%), Gaps = 53/618 (8%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G  I+ L   G  EEA  +F +++  G+  PN  + +  +E LC     DL    L+ ++
Sbjct: 231 GIFIKALCRKGNFEEAVDVFREMEEAGVN-PNAVTCSTYIEGLCSHKRSDLGYEALRALR 289

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
              W  D +  T +++ +C+  +  +A  VF ++++ G   D +++  L+ A+ K G + 
Sbjct: 290 AANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L   M    I+ N      ++    +     + +  F +   SG   D  +Y++++
Sbjct: 350 QAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL------VKEIWED 266
             LCK  ++E A++L +EMKG  ++ D    + LI     +G+L         +KE   +
Sbjct: 410 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 469

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            D+ T  +L     R    NG   +A  LL           +G + L        PN+++
Sbjct: 470 PDIVTYNILVGGFSR----NGLKKEALELLDC---------IGTQGL-------KPNSAT 509

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            + II  L   GK+  A   F    +  C++N   Y+ ++DG C +N   ++YEL   + 
Sbjct: 510 HNRIIEGLCMAGKVKEA-EAFLNTLEDKCLEN---YSAMVDGYCKANFTRKAYELFSRLS 565

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G      +   +   LC   +   AL L+ +M     EP       LI   C+ G   
Sbjct: 566 KQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMK 625

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      +V+ G  PD++ Y+  I G   +  +  A ++F D+   G  PDV+ Y +++
Sbjct: 626 RAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685

Query: 507 SGLCKA---------------QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G  K                +   +A   ++EM   G+ P V  Y +LI+  CK+ N+ 
Sbjct: 686 DGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQ 745

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A+     M+ +    PD++TYT L+   C  G  D AI L NEM  KG  P+      L
Sbjct: 746 DAINLYDEMIAR-GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL 804

Query: 612 ITGLCKCDRPRAALVHFR 629
             G+ K     A  V FR
Sbjct: 805 HRGILK-----ARKVQFR 817



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 243/593 (40%), Gaps = 93/593 (15%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L  L++ Y   G FD+A+    +    G+V  H+ S                        
Sbjct: 160 LDMLVKAYVRVGMFDEAIDALFQTKRRGFV-PHIMS------------------------ 194

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           CN  +N           ++  ++D A+ ++  + + G   +   Y + I  LC+    E 
Sbjct: 195 CNFLMNR---------LIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN--TMTLLCNSIMR 281
           A+ ++ EM+ +G+ P+    S  I          L  + +   R  N    T    +++R
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIR 305

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
              S   + +A              DV ++M+      ++P+   +  +I+   K G L 
Sbjct: 306 GFCSEMKLKEA-------------EDVFIDMV---NEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A++L  +M   G   N  + ++++  LC      E  +  +E  +SG        N + 
Sbjct: 350 QAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             LC+   V  A+ L+ +M+ +     V H T LI   C  GK ++A     +M + G  
Sbjct: 410 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 469

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDIV Y+  +GG         ALEL   I   G  P+   +N II GLC A +V EAE  
Sbjct: 470 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 529

Query: 522 FNEMITKGLIPSVATYNLLINGWCKS---------------------------------- 547
            N +  K L      Y+ +++G+CK+                                  
Sbjct: 530 LNTLEDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCM 585

Query: 548 -GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G  D+A++ L RML  +   P+ I Y  LI   C  G    A ++++ + E+G  P+ I
Sbjct: 586 EGEYDKALILLERMLALDV-EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 644

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           T+  +I G C+ +  R A   F  MKE+G+KPD+  +  ++    S++N  +A
Sbjct: 645 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGH-SKVNLKMA 696



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 223/518 (43%), Gaps = 86/518 (16%)

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ-LYSEMKGS------- 234
           K+  + A   F ++ +SGF  +   Y  +I  LC+ + LE  LQ L SE+ GS       
Sbjct: 74  KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWR-LERKLQSLLSEIVGSKESVLGF 132

Query: 235 GITPDFEILSKLITSCSDEGE------LTLLVKEIWE----DRDVNTM-----------T 273
            IT  F++L +       E        L +LVK        D  ++ +            
Sbjct: 133 DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHI 192

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           + CN +M  L+ +G ID A  + + + +      +G+          +PN  ++ I I  
Sbjct: 193 MSCNFLMNRLIEHGKIDMAVAIYRHLKR------LGL----------NPNDYTYGIFIKA 236

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L + G  + A+ +FREM + G   N    +  I+GLC+  R +  YE LR +  + +   
Sbjct: 237 LCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPID 296

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            F   ++ R  C    +  A ++   M  +G  P       LI   CK G  ++A     
Sbjct: 297 TFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHN 356

Query: 454 DMVQ-----------------------------------EGFLPDIVCYSAAIGGLIDIK 478
           DMV                                     G   D V Y+  +  L  + 
Sbjct: 357 DMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLG 416

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +V+ A+EL  ++       DVV Y  +I+G C   ++ +A+++F EM  +G+ P + TYN
Sbjct: 417 KVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYN 476

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +L+ G+ ++G   +A+  L   +  +   P+  T+  +I+GLC+AG+  +A    N +E+
Sbjct: 477 ILVGGFSRNGLKKEALELLD-CIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 535

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           K C  N   + A++ G CK +  R A   F  + ++G+
Sbjct: 536 K-CLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGI 569


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 165/674 (24%), Positives = 300/674 (44%), Gaps = 64/674 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GLV++   L  ++ + GLC  ++ + N L++  C+   V   E  +  + D G   D   
Sbjct: 176 GLVDQGFGLLSEMVKRGLCF-DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIG 234

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-----VDEHVFSILLVAFSKWGEVDKACELI 158
           L  L+  YC +G   +A     E+I++ W     +D   ++ LL AF K G++ +A  L 
Sbjct: 235 LNTLIDGYCEAGLMSQA----TELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLF 290

Query: 159 ERM-----DDCNIRLNEK--------------TFCVLIHGFVKKSRVDKALQLFDKMTKS 199
             +     D+  ++ N+               T+  LI  + K   V+++  L+ KM  +
Sbjct: 291 NEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMN 350

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--T 257
           G   D      I+ G C++ +L  A  L+ EM   G+ P+    + +I S    G +   
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK---------------- 301
             ++     R ++   + C ++M  L   G   +A  + + ++K                
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470

Query: 302 ----GE-PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
               G+  +A++ ++ +   K  V PN  +F  IIN   K G L  A+ + REM Q   M
Sbjct: 471 YCKLGKMELAELVLQKME--KEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVM 528

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N  +Y  LIDG   +   + + +  +EM+    + ++   + +   L R   +  A +L
Sbjct: 529 PNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSL 588

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M  +G +P + +   LI    K G  + A   + +M ++    D+V Y+A I GL+ 
Sbjct: 589 IIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLR 648

Query: 477 IKRVDLALELFRDICAH----GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           + + D      R +C+     G  PD + YN II+  C   +  +A D+ NEM + G++P
Sbjct: 649 LGKYDP-----RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMP 703

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           +  TYN+LI G CK+G +++A   L  ML  E   P  IT+  L+     + + D  + +
Sbjct: 704 NAVTYNILIGGLCKTGAVEKAESALDEMLVMEF-VPTPITHKFLVKAYSRSEKADKILQI 762

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             ++   G   +   +  LIT  C+    R A V    M ++G+  D+  + ALI  + +
Sbjct: 763 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 822

Query: 653 ELNPPLAFEVLKEM 666
             +   A +   +M
Sbjct: 823 GSHVEKALKTYSQM 836



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 281/615 (45%), Gaps = 32/615 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   +Y  L+ A CK   V+      K+M   G   D  T + +L  +C  G+  +A  +
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL 378

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F E+ + G    HV ++ ++ +  K G V +A  L  +M    I  +  T   ++ G  K
Sbjct: 379 FREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFK 438

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +  +A ++F+ + K   A +   Y  ++ G CK  ++E+A  +  +M+   + P+   
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498

Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S +I   + +G L+  V  + E   R+V   T++   ++      G  D A +  + M 
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMK 558

Query: 301 -----KGEPIADVGVEML---------------MIFKGTVSPNTSSFDIIINTLLKDGKL 340
                +   I D+ +  L               M  KG + P+  ++  +I+   K+G  
Sbjct: 559 SRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG-IDPDIVNYASLIDGYFKEGNQ 617

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             ALS+ +EM +     +V  YN LI GL    + +  Y   R M E G  P   T N++
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR-MIELGLAPDCITYNTI 676

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C +     AL+++ +M+  G  P      +LI  LCK G   +A   L +M+   F
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF 736

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P  + +   +      ++ D  L++   + A G    +  YN +I+  C+     +A+ 
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           + +EM+ +G+   + TYN LI G+C   ++++A+   S+M   +  +P++ TY TL+ GL
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFV-DGIAPNITTYNTLLGGL 855

Query: 581 CIAG----RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC-DRPRAALVHFRMMKEKG 635
             AG      ++   L +EM E+G  PN  T+  L++G  +  +R +  ++H  M+  KG
Sbjct: 856 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMI-TKG 914

Query: 636 MKPDMFVFVALISAF 650
             P +  +  LIS +
Sbjct: 915 FVPTLKTYNVLISDY 929



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 258/580 (44%), Gaps = 57/580 (9%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  VG  +EA  +F+ + +  L  PN  +Y+ LL+  CK   ++L E+ L++M+      
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLA-PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELI 158
           +  T + ++  Y   G   KA+ V  E++    + +  V++IL+  + K GE D A +  
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + M    +  +   F +L++   +  R+D+A  L   M   G   D   Y  +I G  K 
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
                AL +  EMK   I   F++++                                N+
Sbjct: 615 GNQLAALSIVQEMKEKNIR--FDVVA-------------------------------YNA 641

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +++ L+  G  D  Y                V   MI  G ++P+  +++ IINT    G
Sbjct: 642 LIKGLLRLGKYDPRY----------------VCSRMIELG-LAPDCITYNTIINTYCIKG 684

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K + AL +  EM   G M N   YN LI GLC +  +E++   L EM    F PT  T  
Sbjct: 685 KTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHK 744

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            + +   R +     L +  K+   G E  +     LI   C+ G   +A   L +MV+ 
Sbjct: 745 FLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKR 804

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA----QR 514
           G   D+V Y+A I G      V+ AL+ +  +   G  P++  YN ++ GL  A    + 
Sbjct: 805 GISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEM 864

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + E E L +EM  +GL+P+ ATY++L++G+ + GN  + ++    M+ K    P + TY 
Sbjct: 865 MEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK-GFVPTLKTYN 923

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            LI     +G+  +A  L N++  KG  PN  T+  L  G
Sbjct: 924 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 162/677 (23%), Positives = 275/677 (40%), Gaps = 89/677 (13%)

Query: 6   SRARRI---APL-RVLAQDVVKSRCFMSPGALGF-------LIRCLGSVGLVEEANMLFD 54
           +R RR     P+ R  +  + K   F+ P            LIR   +      A+  F 
Sbjct: 24  TRLRRFFYPTPITRTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFS 83

Query: 55  QVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNS 114
            ++  GL VP    +N LL     S  V  V++   +M   G   D +++  L+   C  
Sbjct: 84  HMRALGL-VPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKV 142

Query: 115 GQFDKALSVF--NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           G  D AL     N+++D                                      ++  T
Sbjct: 143 GDLDLALGYLRNNDVVD--------------------------------------IDNVT 164

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           +  +I GF +K  VD+   L  +M K G   D+   ++++ G C+   ++ A  +   + 
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 233 GSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
             G+T D   L+ LI    + G   + T L++  W   DV    +  N++++     G +
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRS-DVKIDIVTYNTLLKAFCKTGDL 283

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A +L               E+L  +K        + D++    +K+ +  L       
Sbjct: 284 TRAESLFN-------------EILGFWKD--EDRLKNNDVVTQNEIKNLQPTLVT----- 323

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
                       Y  LI   C    +EES+ L ++M  +G  P   T +S+    CR   
Sbjct: 324 ------------YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L R+M   G +P       +I  L K G+ MEAF   + MV  G   DIV  + 
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + GL  + +   A E+F  I      P+ V Y+ ++ G CK  ++  AE +  +M  + 
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+V T++ +ING+ K G + +A+  L  M+++    P+ I Y  LIDG   AG  D A
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV-MPNTIVYAILIDGYFKAGEQDVA 550

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
                EM+ +    + + F  L+  L +  R   A      M  KG+ PD+  + +LI  
Sbjct: 551 DDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610

Query: 650 FLSELNPPLAFEVLKEM 666
           +  E N   A  +++EM
Sbjct: 611 YFKEGNQLAALSIVQEM 627



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 148/629 (23%), Positives = 276/629 (43%), Gaps = 58/629 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV--EMRLKEMQ 93
           L+    + GLV +  +++  +   G+ VP+ +S N L+ +LCK   +DL    +R  ++ 
Sbjct: 100 LLYQFNASGLVSQVKLMYSDMLFCGV-VPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV 158

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVD 152
           D     D  T   ++  +C  G  D+   + +E++  G   D    +IL+  + + G V 
Sbjct: 159 DI----DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A  ++  + D  +  +      LI G+ +   + +A +L +   +S    D   Y+ ++
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274

Query: 213 GGLCKNKQLEMALQLYSE----------MKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
              CK   L  A  L++E          +K + +    EI +   T  +    +    K 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 263 IW-EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           +  E+       ++ N IM  +V+  SI      L    +   + +  V    +++  + 
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSI------LYGFCRHGKLTEAAVLFREMYEMGLD 388

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  S+  IIN+L K G++  A +L  +M   G   ++     ++DGL    + +E+ E+
Sbjct: 389 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 448

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              + +    P   T +++    C+   +  A  +++KM  +   P V   + +I    K
Sbjct: 449 FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAK 508

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G   +A   L +MVQ   +P+ + Y+  I G       D+A +  +++ +       V 
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           ++I+++ L +  R+ EA  L  +M +KG+ P +  Y  LI+G+ K GN   A+  +  M 
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628

Query: 562 EK--------------------------------ESG-SPDVITYTTLIDGLCIAGRPDD 588
           EK                                E G +PD ITY T+I+  CI G+ +D
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTED 688

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCK 617
           A+ + NEM+  G  PN +T+  LI GLCK
Sbjct: 689 ALDILNEMKSYGIMPNAVTYNILIGGLCK 717



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 157/344 (45%), Gaps = 29/344 (8%)

Query: 64  PNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  +YN ++   C K  + D +++ L EM+ YG   +  T   L+   C +G  +KA S
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDI-LNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAES 726

Query: 123 VFNEIIDHGWVDEHVFSILLV-AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             +E++   +V   +    LV A+S+  + DK  ++ E++    + L+   +  LI  F 
Sbjct: 727 ALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +     KA  + D+M K G ++D   Y+ +I G C    +E AL+ YS+M   GI P+  
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 846

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + L+   S+ G        + E+    T  L+     R LV N +    Y++L +   
Sbjct: 847 TYNTLLGGLSNAG--------LMEEMMEETEKLVSEMNERGLVPNAA---TYDILVSGYG 895

Query: 302 --GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
             G     + + + MI KG V P   +++++I+   K GK+  A  L  ++   G + N 
Sbjct: 896 RVGNRKKTIILHIEMITKGFV-PTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 954

Query: 360 FLYNNLIDGLCN-------SNRLEESYE-----LLREMEESGFK 391
           F Y+ L  G  N          L+ SYE     LL EM   G K
Sbjct: 955 FTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLK 998


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 257/544 (47%), Gaps = 58/544 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+V  +S   +KA +V+  +I+HG +   + F+ +L +  K G++++  ++   M   N
Sbjct: 246 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 305

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  +E T+ +LI+GF K  ++++A +    M +SGFA     ++ +I G CK    + A 
Sbjct: 306 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 365

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            +  EM  +GI P     +  I  C+                       LC+        
Sbjct: 366 GVTDEMLNAGIYPTTSTYNIYI--CA-----------------------LCDF------- 393

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G ID A  LL +M                     +P+  S++ +++  +K GK   A  
Sbjct: 394 -GRIDDARELLSSM--------------------AAPDVVSYNTLMHGYIKMGKFVEASL 432

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF ++       ++  YN LIDGLC S  LE +  L  EM      P   T  ++ +   
Sbjct: 433 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 492

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMV-QEGFLPD 463
           +  ++  A  +  +M  +G +P    + T  + EL + G + +AFR   +MV  +   PD
Sbjct: 493 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKAFRLHEEMVATDHHAPD 551

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +  Y+  I GL  +  +  A+E  R I   G  PD V Y  +I G  +  +   A +L++
Sbjct: 552 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 611

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM+ K L PSV TY +LI G  K+G ++QA    + M +K    P+V+T+  L+ G+C A
Sbjct: 612 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKA 670

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  D+A     +MEE+G  PN+ ++  LI+  C  ++    +  ++ M +K ++PD +  
Sbjct: 671 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 730

Query: 644 VALI 647
            AL 
Sbjct: 731 RALF 734



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 220/493 (44%), Gaps = 31/493 (6%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + KKS  +K L  F+KM + GF       ++++  L  ++ +  A  +Y  M   GI P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 240 FEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + ++ SC   G+L   V +IW   + R++    +  N ++     NG +++A    
Sbjct: 275 VITFNTMLDSCFKAGDLER-VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 333

Query: 297 QAMIKG---------EPIAD-----------VGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
             M +           P+ +            GV   M+  G + P TS+++I I  L  
Sbjct: 334 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCD 392

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G++D A    RE+       +V  YN L+ G     +  E+  L  ++      P+  T
Sbjct: 393 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 448

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++   LC   ++ GA  L  +M  Q   P V   T L+K   K+G    A     +M+
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRV 515
           ++G  PD   Y+    G + +   D A  L  ++ A     PD+  YN+ I GLCK   +
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 568

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A +   ++   GL+P   TY  +I G+ ++G    A      ML K    P VITY  
Sbjct: 569 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL-YPSVITYFV 627

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI G   AGR + A     EM+++G  PN +T  AL+ G+CK      A  +   M+E+G
Sbjct: 628 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 687

Query: 636 MKPDMFVFVALIS 648
           + P+ + +  LIS
Sbjct: 688 IPPNKYSYTMLIS 700



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 193/478 (40%), Gaps = 95/478 (19%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G +E  + ++ ++KR  +   +  +YN L+    K+  ++       +M+  G+    Y
Sbjct: 288 AGDLERVDKIWLEMKRRNIEF-SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 346

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           +  PL++ YC  G FD A  V +E+++ G +     ++I + A   +G +D A EL+  M
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC----- 216
              ++     ++  L+HG++K  +  +A  LFD +           Y+ +I GLC     
Sbjct: 407 AAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 462

Query: 217 ------------------------------KNKQLEMALQLYSEMKGSGITPD------- 239
                                         KN  L MA ++Y EM   GI PD       
Sbjct: 463 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 522

Query: 240 -------------FEILSKLITSCSDEGELTL-------------LVKEIWEDRDVNTMT 273
                        F +  +++ +     +LT+             LVK I   R +  + 
Sbjct: 523 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 582

Query: 274 LLCN-----SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           L+ +     +++R  + NG    A NL   M++                  + P+  ++ 
Sbjct: 583 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR----------------LYPSVITYF 626

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I    K G+L+ A     EM + G   NV  +N L+ G+C +  ++E+Y  L +MEE 
Sbjct: 627 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 686

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           G  P  ++   +    C  +     + L ++M  +  EP    +  L K L K  ++M
Sbjct: 687 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESM 744


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 217/452 (48%), Gaps = 42/452 (9%)

Query: 252 DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           D   +T LVK +W +  +     L + +    +   +  + Y +L   +       + ++
Sbjct: 76  DAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDA--KTYGILINGLCKARKTGLAIK 133

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           +    KG    +  ++ +II++L KDG    AL +F EM   G + +V +Y++L+DGLC 
Sbjct: 134 LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPW 428
             RL+E+ E  +EME  G     +T NS+   L R    ++V   LNL   M  +G  P 
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL---MVDRGFSPD 250

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+LI  LCK GK  EA + L  M  +G  PDI+ Y+  + GL  + +++ A +LF 
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G   +V +YNI+I+G CK Q++ EA  LF EM  KGL PS  TYN LI   C+SG
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 549 NIDQAM------------------------LCLSRMLE----------KESGSPDVITYT 574
            +  A                         LC +  LE          K    P++  ++
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            L+DG+C AG+ ++A   ++E+ + G  P+ I +  LI GLC       A+     M+EK
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  PD   F  +I   L E     A ++L+EM
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 522



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 243/497 (48%), Gaps = 36/497 (7%)

Query: 96  GWGYDKYTLTPLLQ-VYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDK 153
           G+  D  T+T L++ V+  +G  D A+ +F+E+ + G + D   + IL+    K  +   
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L E+M   N + +  T+ ++I    K     +AL +F +M  +G   D  +Y  ++ 
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR--- 267
           GLC+  +L+ AL+ + EM+G GI+ D    + LI   S  G   E+T  +  +  DR   
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN-LMVDRGFS 248

Query: 268 -DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            D  T T+L +     L   G + +A  +L+               LM  KG   P+  +
Sbjct: 249 PDAFTFTILIDG----LCKEGKVGEAQQILE---------------LMHHKGK-EPDILT 288

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ ++N L   G+L+ A  LF  +   G   NVF YN LI+G C   +++E++ L  EM 
Sbjct: 289 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR 348

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G KP+  T N++   LC+   V  A  L  +M+  G    +    +L+  LCK+G   
Sbjct: 349 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLE 408

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA      + +    P+I  +S  + G+    +++ A + F +I  +G  PD +AYNI+I
Sbjct: 409 EAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILI 468

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +GLC    ++EA  L  +M  KG +P   T+N++I    K   I +A+  L  M  + + 
Sbjct: 469 NGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR-NF 527

Query: 567 SPDVITYTTLIDGLCIA 583
           SPD    + L   LC+A
Sbjct: 528 SPDEAVTSML---LCLA 541



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 200/426 (46%), Gaps = 21/426 (4%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +AR+   L +   + +K  C       G +I  L   G+  EA  +F ++   G+ +P
Sbjct: 122 LCKARKTG-LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGI-LP 179

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y+ L++ LC+   +       KEM+  G   D YT   L+     +G + +     
Sbjct: 180 DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFL 239

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N ++D G+  D   F+IL+    K G+V +A +++E M       +  T+  L++G    
Sbjct: 240 NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLV 299

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            +++ A +LF+ +   G   +   Y+++I G CK+++++ A +L+ EM+  G+ P     
Sbjct: 300 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTY 359

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS--IMRILVSNGSIDQAYNLLQAMIK 301
           + LI +    G +    K   E +       L     ++  L  NG +++A +L Q++ K
Sbjct: 360 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKK 419

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E                  PN   F I+++ + + GKL+ A   F E+++ G   +   
Sbjct: 420 TEH----------------KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIA 463

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+GLCN   L E+ +LL +MEE G  P   T N + + L +  ++  A+ L+ +MR
Sbjct: 464 YNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 523

Query: 422 VQGHEP 427
            +   P
Sbjct: 524 NRNFSP 529



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%)

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PD V    ++ G+     + +A  LF+EM  KGL     TY +LING CK+     
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A+    +M  K +   DV TY  +ID LC  G   +A+ +++EM   G  P+ + + +L+
Sbjct: 131 AIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            GLC+  R + AL  F+ M+ +G+  D++ + +LI   
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 226



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 4/204 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  LF++++ +GL  P+  +YN L+ ALC+S  V   +    EMQ  G      T  
Sbjct: 337 IDEAFRLFEEMRPKGL-KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395

Query: 106 PLLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
            LL   C +G  ++A+ +F  I   +H   +  VFSILL    + G++++A +  + +  
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHK-PNIEVFSILLDGMCRAGKLEEAWKQFDEISK 454

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  +   + +LI+G   K  + +A++L  +M + G   D+  ++VII  L K  ++  
Sbjct: 455 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 514

Query: 224 ALQLYSEMKGSGITPDFEILSKLI 247
           A+QL  EM+    +PD  + S L+
Sbjct: 515 AIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G +EEA   FD++ + GL  P+  +YN L+  LC    +      L +M++ G   D  
Sbjct: 439 AGKLEEAWKQFDEISKNGL-EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 497

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
           T   ++Q      +  +A+ +  E+ +  +  DE V S+LL
Sbjct: 498 TFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 171/671 (25%), Positives = 285/671 (42%), Gaps = 66/671 (9%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K+  F+     GF+  C+ S+ + ++A     Q +R G+ +P+  + N L   L +   V
Sbjct: 154 KNNYFLLRAFNGFVKTCV-SLNMFDKAIDFLFQTRRRGI-LPDVLTCNFLFNRLVEHGEV 211

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
           D      ++++ +G+  + YT   +++  C  G   + L VF E+   G +   + F+  
Sbjct: 212 DKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAY 271

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +         D   E+++     N  L    +  ++ GF  + ++D+A  +FD M + G 
Sbjct: 272 IEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGV 331

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D  +Y  +I G CK+  L  AL L+ EM   G+  +  ++S  I  C  E  +TL V 
Sbjct: 332 VPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVS-CILHCLGEMGMTLEVV 390

Query: 262 EIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           + +++   + M L     N +   L   G ++ A  +++ M       DV          
Sbjct: 391 DQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDV---------- 440

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                   +  +IN     G L  A ++F+EM + G   ++  YN L  GL  +    E+
Sbjct: 441 ------KHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARET 494

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA------------------------L 414
            +LL  ME  G KP   T   +   LC    V+ A                         
Sbjct: 495 VKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCET 554

Query: 415 NLVRK-------MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +LV+K       +  QG          L+ +LC  G   +A + L  M+     P  + Y
Sbjct: 555 DLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMY 614

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  +  L     +  A  LF      G  PDVV Y I+I+  C+   + EA DLF +M  
Sbjct: 615 SKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKR 674

Query: 528 KGLIPSVATYNLLINGWCK---------SGNIDQAMLCLS---RMLEKESGSPDVITYTT 575
           +G+ P V T+ +L++G  K          G      L +S   R +E+   +PDV+ YT 
Sbjct: 675 RGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTV 734

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+DG         A+ L+++M E G  P+ IT+ AL++GLC       A+     M  KG
Sbjct: 735 LMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKG 794

Query: 636 MKPDMFVFVAL 646
           M PD+ +  AL
Sbjct: 795 MTPDVHIISAL 805



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 278/608 (45%), Gaps = 48/608 (7%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
             +I+ L   G +++   +F++++R G+ +P++Y +   +E LC +   DL    L+  +
Sbjct: 234 AIVIKALCKKGDLKQPLCVFEEMERVGV-IPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
                 + Y  T +++ +CN  + D+A  VF+++   G V D +V+S L+  + K   + 
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLL 352

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L + M    ++ N      ++H   +     + +  F ++ +SG   D   Y+++ 
Sbjct: 353 RALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVF 412

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWED--- 266
             LC   ++E A+++  EMK   +  D +  + LI     +G+L     + KE+ E    
Sbjct: 413 DALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLK 472

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            D+ T  +L   + R    NG   +   LL  M         G++          PN+++
Sbjct: 473 PDIVTYNVLAAGLSR----NGHARETVKLLDFM------ESQGMK----------PNSTT 512

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
             +II  L   GK+  A   F  +      +N+ +Y+ +++G C ++ +++SYE+  ++ 
Sbjct: 513 HKMIIEGLCSGGKVLEAEVYFNSLED----KNIEIYSAMVNGYCETDLVKKSYEVFLKLL 568

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G      +   +   LC   D+  A+ L+ +M +   EP     + ++  LC+ G   
Sbjct: 569 NQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMK 628

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A       V  GF PD+V Y+  I     +  +  A +LF+D+   G  PDV+ + +++
Sbjct: 629 NARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLL 688

Query: 507 SGLCK---AQRVAE----------AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            G  K    +R +              +  +M    + P V  Y +L++G  K+ N  QA
Sbjct: 689 DGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQA 748

Query: 554 MLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           +    +M+  ESG  PD ITYT L+ GLC  G  + A+ L NEM  KG  P+     AL 
Sbjct: 749 VSLFDKMI--ESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALK 806

Query: 613 TGLCKCDR 620
            G+ K  +
Sbjct: 807 RGIIKARK 814



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 233/572 (40%), Gaps = 124/572 (21%)

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           DKA + + +     I  +  T   L +  V+   VDKAL +++++ + GF  +   Y ++
Sbjct: 177 DKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIV 236

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I  LCK   L+  L ++ EM+  G+ P     +  I     EG                 
Sbjct: 237 IKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYI-----EG----------------- 274

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
              LCN        N   D  Y +LQA  KG    +V                 ++  ++
Sbjct: 275 ---LCN--------NHRSDLGYEVLQAFRKGNAPLEV----------------YAYTAVV 307

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL---------- 381
                + KLD A  +F +M + G + +V++Y++LI G C S+ L  +  L          
Sbjct: 308 RGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVK 367

Query: 382 -------------------------LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
                                     +E++ESG        N +F  LC    V  A+ +
Sbjct: 368 TNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEM 427

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           V +M+ +     VKH T LI   C  G  + AF    +M ++G  PDIV Y+    GL  
Sbjct: 428 VEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR 487

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
                  ++L   + + G  P+   + +II GLC   +V EAE  FN +  K    ++  
Sbjct: 488 NGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDK----NIEI 543

Query: 537 YNLLINGWCKS-----------------------------------GNIDQAMLCLSRML 561
           Y+ ++NG+C++                                   G+I++A+  L RML
Sbjct: 544 YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRML 603

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
              +  P  I Y+ ++  LC AG   +A  L++    +G  P+ +T+  +I   C+ +  
Sbjct: 604 -LSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCL 662

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + A   F+ MK +G+KPD+  F  L+   L E
Sbjct: 663 QEAHDLFQDMKRRGIKPDVITFTVLLDGSLKE 694



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 227/523 (43%), Gaps = 41/523 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +FD ++R+G+ VP+ Y Y+ L+   CKS ++        EM   G   +   ++
Sbjct: 316 LDEAQGVFDDMERQGV-VPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVS 374

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            +L      G   + +  F E+ + G ++D   ++I+  A    G+V+ A E++E M   
Sbjct: 375 CILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSK 434

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            + L+ K +  LI+G+  +  +  A  +F +M + G   D   Y+V+  GL +N      
Sbjct: 435 RLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARET 494

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW----EDRDVNTMTLLCNSIM 280
           ++L   M+  G+ P+      +I      G++  L  E++    ED+++   + + N   
Sbjct: 495 VKLLDFMESQGMKPNSTTHKMIIEGLCSGGKV--LEAEVYFNSLEDKNIEIYSAMVNGYC 552

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              +   S +    LL                    +G ++   S F ++ + L   G +
Sbjct: 553 ETDLVKKSYEVFLKLLN-------------------QGDMAKKASCFKLL-SKLCMTGDI 592

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A+ L   M       +  +Y+ ++  LC +  ++ +  L       GF P   T   M
Sbjct: 593 EKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIM 652

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI---------KELCKHGK----AME 447
               CR   +  A +L + M+ +G +P V   T+L+         K    HGK    ++ 
Sbjct: 653 INSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLY 712

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
               L DM Q    PD+VCY+  + G +       A+ LF  +   G  PD + Y  ++S
Sbjct: 713 VSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVS 772

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
           GLC    V +A  L NEM +KG+ P V   + L  G  K+  +
Sbjct: 773 GLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKV 815



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 37/330 (11%)

Query: 357 QNVFL---YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            N FL   +N  +    + N  +++ + L +    G  P   T N +F  L    +V  A
Sbjct: 155 NNYFLLRAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKA 214

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L +  +++  G  P      ++IK LCK G   +      +M + G +P   C++A I G
Sbjct: 215 LAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEG 274

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L +  R DL  E+ +         +V AY  ++ G C   ++ EA+ +F++M  +G++P 
Sbjct: 275 LCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPD 334

Query: 534 VATYNLLINGWCKSGNIDQAML----------------------CLSRM---LE------ 562
           V  Y+ LI+G+CKS N+ +A+                       CL  M   LE      
Sbjct: 335 VYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFK 394

Query: 563 --KESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
             KESG   D + Y  + D LC+ G+ +DA+ +  EM+ K    +   +  LI G C   
Sbjct: 395 ELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQG 454

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISA 649
               A   F+ MKEKG+KPD+  +  L + 
Sbjct: 455 DLVTAFNMFKEMKEKGLKPDIVTYNVLAAG 484



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 154/350 (44%), Gaps = 31/350 (8%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L   G   E   L D ++ +G+  PN+ ++  ++E LC    V   E+    ++D     
Sbjct: 485 LSRNGHARETVKLLDFMESQGM-KPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE- 542

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI-LLVAFSKWGEVDKACELI 158
                + ++  YC +    K+  VF ++++ G + +      LL      G+++KA +L+
Sbjct: 543 ---IYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           +RM   N+  ++  +  ++    +   +  A  LFD     GF  D   Y ++I   C+ 
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659

Query: 219 KQLEMALQLYSEMKGSGITPDF------------EILSKLITSCSDEGELTLLVKEIWED 266
             L+ A  L+ +MK  GI PD             E L K  +S       +L V  I   
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTIL-- 717

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           RD+  M +  + +   ++ +G + +  N  QA+   + + + G+E          P+T +
Sbjct: 718 RDMEQMKINPDVVCYTVLMDGHM-KTDNFQQAVSLFDKMIESGLE----------PDTIT 766

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           +  +++ L   G ++ A++L  EM+  G   +V + + L  G+  + +++
Sbjct: 767 YTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 251/545 (46%), Gaps = 54/545 (9%)

Query: 120 ALSVFNEIIDHG----WVDEHVFSILLVAFSKWGEVDKACELIERM----------DDCN 165
           A+S+FN +   G      D   F IL+  F   G +D A E   R           D  N
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK------ 219
              N  ++ ++I+G  K+  VDKA  LF +M   GF  +   Y+ +I GLCK +      
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 220 ----------QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--- 266
                     QLE A++L  +M G G+ PD    S LI      G  T   + I++    
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTE-ARNIFDSMVR 253

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM----------- 314
           R  N       +++    + G++   ++LL  MI+ G P+ D    +L+           
Sbjct: 254 RGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDK 313

Query: 315 -------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                  + +   SPN  ++  +I+ L K G+++ A+S F +M   G   ++  + +LI 
Sbjct: 314 AMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIH 373

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC     ++  +L  EM   G  P    LN++   LC+   V+ A +   ++   G +P
Sbjct: 374 GLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKP 433

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   T+LI   C  GK  E+ + L  MV  G  PD V YSA + G     RVD AL L+
Sbjct: 434 DVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALY 493

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           R++ +    P+ + YNII+ GL  A RV  A + + +++  G+   + TYN+++ G C++
Sbjct: 494 REMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCEN 553

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
             +D+A+     +  KE    +V T+  +I GL   GR  DA  L++ +   G  P+ I 
Sbjct: 554 SFVDEALRMFQGLRSKEF-QLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAII 612

Query: 608 FMALI 612
           +  +I
Sbjct: 613 YGLMI 617



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 237/504 (47%), Gaps = 27/504 (5%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA---LQLFDKMTKSG---FASDAAMYD 209
           EL+ R    ++    +   V+ HG    S+   A   + LF+ M + G    A+DA  + 
Sbjct: 39  ELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATDACTFG 98

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGIT------------PDFEILSKLITSCSDEGEL- 256
           ++I   C    L+ AL+   E +GS               P+    + +I     EGE+ 
Sbjct: 99  ILIRCFCNVGLLDFALE--EESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVD 156

Query: 257 ---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
              TL  + + +    N +T   NS++  L    ++D+A  +LQ M     + +    + 
Sbjct: 157 KAYTLFHEMLGQGFPPNIVTY--NSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLK 214

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            +  G + P+  ++ ++I+   K G+   A ++F  M + G   + + Y  L+ G     
Sbjct: 215 KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            L + ++LL  M + G        N + R   + + +  A+    +MR +G  P V   T
Sbjct: 275 ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYT 334

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I  LCK G+  +A    + MV EG  PDI+ +++ I GL  I       +L  ++   
Sbjct: 335 TVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+ +  N I+  LCK  RV EA D F+++I  G+ P V +Y +LI+G+C  G +D++
Sbjct: 395 GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L RM+      PD +TY+ L++G C  GR DDA+ L+ EM  K   PN IT+  ++ 
Sbjct: 455 IKLLGRMVSI-GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILH 513

Query: 614 GLCKCDRPRAALVHFRMMKEKGMK 637
           GL    R  AA   +  + + G++
Sbjct: 514 GLFHAGRVVAAREFYMKIVDSGIQ 537



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 156/638 (24%), Positives = 271/638 (42%), Gaps = 105/638 (16%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P  L +  +I  L   G V++A  LF ++  +G   PN  +YN +++ LCK+ ++D  E 
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFP-PNIVTYNSVIDGLCKAQAMDKAEA 195

Query: 88  RLKEMQDYGW----------------GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
            L++M D G                   D  T + L+  YC  G+  +A ++F+ ++  G
Sbjct: 196 VLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 132 W-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              D + +  LL  ++  G +    +L+  M    I L +  F +LI  + K   +DKA+
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
             F +M + GF+ +   Y  +I  LCK  ++E A+  +S+M   G++PD    + LI   
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
              GE   + K  +E                                             
Sbjct: 376 CTIGEWKKVEKLSFE--------------------------------------------- 390

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
              MI +G + PN    + I+++L K+G++  A   F ++  +G   +V  Y  LIDG C
Sbjct: 391 ---MINRG-IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYC 446

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              +++ES +LL  M   G +P + T +++    C+   V  AL L R+M  +  +P   
Sbjct: 447 LDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAI 506

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +++  L   G+ + A  F   +V  G    I  Y+  +GGL +   VD AL +F+ +
Sbjct: 507 TYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGL 566

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            +     +V  +NI+I GL K  R+ +A+ LF+ ++  GL+P    Y L+I    + G +
Sbjct: 567 RSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLL 626

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           +++                                  D + L   ME+ GC  N  T  A
Sbjct: 627 EES----------------------------------DELFL--SMEKNGCTANSRTLNA 650

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           ++  L +    R A  +   + EK    +    V LIS
Sbjct: 651 IVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS 688



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 32/335 (9%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  S++++IN L K+G++D A +LF EM   G   N+  YN++IDGLC +  ++++  +
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L++M + G                    +  A+ L++KM   G +P V   +LLI   CK
Sbjct: 197 LQQMFDKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCK 237

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYS------AAIGGLIDIKRVDLALELFRDICAHGC 495
            G+  EA      MV+ G  PD   Y       A  G L+D+   DL   + +D    G 
Sbjct: 238 IGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMH--DLLALMIQD----GI 291

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             +   +NI+I    K + + +A   F EM  KG  P+V TY  +I+  CK+G ++ A+ 
Sbjct: 292 PLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVS 351

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             S+M+  E  SPD+IT+T+LI GLC  G       L  EM  +G  PN I    ++  L
Sbjct: 352 HFSQMV-SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           CK  R   A   F  +   G+KPD+  +  LI  +
Sbjct: 411 CKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGY 445


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 254/557 (45%), Gaps = 23/557 (4%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACELIE 159
           ++ T  +      GQ++KAL +  EI +   V  +VF  +  + A     + + A  L+ 
Sbjct: 145 HSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLR 204

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            M D  +  +E ++   I    +  + ++ + L  +M   G   DA  Y+ +I G  K  
Sbjct: 205 EMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEG 264

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLC 276
           Q + AL + +EM   G+TP+    +  I +C   G   E   +++++ E + V    +  
Sbjct: 265 QWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQM-ESQGVTPDVISY 323

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           ++ ++     G  + + +LL  M      A  GV          +PNT  F+  I    K
Sbjct: 324 DAAIKACGGGGQWETSVDLLDEM------AGRGV----------APNTIHFNSAIVACGK 367

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+ + A+ L RE+T +G   +   +N+ I     S R +E+ ELL+EM     KP   +
Sbjct: 368 GGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAIS 427

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            NS      +      AL L R+M  +G  P V  + + I+   + G+  E    L  M 
Sbjct: 428 YNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMP 487

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +G  P+++ Y++AI       + + AL+L   +      PD + YN  I+   K  R  
Sbjct: 488 AQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWK 547

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA  L  EM  +GL P V +Y   I+ + K+G  ++A+  L +M  K   +P+VITY ++
Sbjct: 548 EAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGL-TPNVITYNSV 606

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I      G  + A+ L  E++E   AP+ +++   I+   K  R   AL   R M  +G+
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGL 666

Query: 637 KPDMFVFVALISAFLSE 653
            PD+  + + I A  +E
Sbjct: 667 TPDVISYTSAIRACNAE 683



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 152/607 (25%), Positives = 257/607 (42%), Gaps = 28/607 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I   G  G  E+A  L  ++  +    PN + YN  +EA       ++    L+EM D  
Sbjct: 151 ITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADRE 210

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKAC 155
              D+ +    ++     GQ+++ + +  E+   G   D   ++ ++    K G+  +A 
Sbjct: 211 VVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEAL 270

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            ++  M    +     ++ + I    +  R  +A+++  +M   G   D   YD  I   
Sbjct: 271 SVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKAC 330

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
               Q E ++ L  EM G G+ P+    +  I +C   G+    V+ +   R+V  + L 
Sbjct: 331 GGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL---REVTALGLT 387

Query: 276 C-----NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                 NS +     +G   +A  LL+ M                    + P+  S++  
Sbjct: 388 PDATSFNSAIAACTKSGRWKEALELLKEMPAKR----------------LKPDAISYNSA 431

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K G+ ++AL L R+M   G   NV   N  I       R +E  ELLR+M   G 
Sbjct: 432 IEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGL 491

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAF 449
            P   T NS  +   +      AL+L+ KM+     P  + +N+  I    K G+  EA 
Sbjct: 492 TPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSA-IAACSKRGRWKEAV 550

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             L +M  +G  PD++ Y+AAI       + + A+EL R +   G  P+V+ YN +I   
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            +     +A DL  E+    + P + +YNL I+   K G  ++A L L R +  E  +PD
Sbjct: 611 GRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA-LDLLREMPAEGLTPD 669

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           VI+YT+ I      G  + A+ L N M   G +P   ++   I    K  R   A+   R
Sbjct: 670 VISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVR 729

Query: 630 MMKEKGM 636
            M ++G+
Sbjct: 730 EMAQRGL 736



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 240/542 (44%), Gaps = 21/542 (3%)

Query: 112 CNSG-QFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           C SG Q++ A+S+  E+ D   V DE  ++  + A  + G+ ++   L+  M    +  +
Sbjct: 190 CGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPD 249

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  +I G  K+ +  +AL +  +M+  G   +   Y++ I    ++ + + A+++  
Sbjct: 250 AITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLR 309

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNG 287
           +M+  G+TPD       I +C   G+    V  + E   R V   T+  NS +      G
Sbjct: 310 QMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGG 369

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
             ++A  LL+       +  +G+          +P+ +SF+  I    K G+   AL L 
Sbjct: 370 QWEKAVELLRE------VTALGL----------TPDATSFNSAIAACTKSGRWKEALELL 413

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           +EM       +   YN+ I+      + E + EL R+M   G  P   + N   R    R
Sbjct: 414 KEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGER 473

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
                 L L+R+M  QG  P V      IK   K G+  +A   L  M +    PD + Y
Sbjct: 474 GRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITY 533

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++AI       R   A+ L R++   G  PDV++Y   I    K  +   A +L  +M T
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPT 593

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KGL P+V TYN +I    + G  ++A L L + L++ + +PD+++Y   I      GR +
Sbjct: 594 KGLTPNVITYNSVIKACGRGGEWEKA-LDLLKELKETAVAPDLMSYNLAISACGKRGRWE 652

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A+ L  EM  +G  P+ I++ + I           AL    +M   G+ P    +   I
Sbjct: 653 EALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAI 712

Query: 648 SA 649
            A
Sbjct: 713 EA 714



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 241/555 (43%), Gaps = 29/555 (5%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           ++L +   RE   VP+  SYN  ++A  +    + V   L+EM   G   D  T   ++ 
Sbjct: 201 SLLREMADRE--VVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVIT 258

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
                GQ+ +ALSV  E+   G   E + +++ + A  + G   +A E++ +M+   +  
Sbjct: 259 GCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTP 318

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  ++   I       + + ++ L D+M   G A +   ++  I    K  Q E A++L 
Sbjct: 319 DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL 378

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            E+   G+TPD    +  I +C+  G   E   L+KE+   R +    +  NS +     
Sbjct: 379 REVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR-LKPDAISYNSAIEACGK 437

Query: 286 NGSIDQAYNLLQAMIKGEPIADV------------------GVEML--MIFKGTVSPNTS 325
            G  + A  L + M       +V                  G+E+L  M  +G ++PN  
Sbjct: 438 GGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG-LTPNVI 496

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +++  I T  K G+ + AL L  +M ++    +   YN+ I       R +E+  LLREM
Sbjct: 497 TYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREM 556

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P   +  +      +      A+ L+R+M  +G  P V     +IK   + G+ 
Sbjct: 557 PGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEW 616

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A   L ++ +    PD++ Y+ AI       R + AL+L R++ A G  PDV++Y   
Sbjct: 617 EKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSA 676

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I          +A  L N M   G+ P+  +Y+L I   C  G   +  +CL R + +  
Sbjct: 677 IRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA-CGKGGRREEAVCLVREMAQRG 735

Query: 566 GSPDVITYTTLIDGL 580
            S   I+ + +++ L
Sbjct: 736 LSHRNISNSLIVEAL 750



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 221/483 (45%), Gaps = 23/483 (4%)

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKL 246
           +AL + D+M + G    A  Y   I    +  Q E AL+L  E+ +  G++P+    +  
Sbjct: 128 EALGILDEMKEGGVVC-AHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSA 186

Query: 247 ITSCS--DEGELTL-LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           I +C   D+ E+ + L++E+  DR+V    +  NS ++     G  ++   LL+ M    
Sbjct: 187 IEACGSGDQWEIAVSLLREM-ADREVVPDEISYNSAIKACGRGGQWERVIGLLREM---- 241

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
               VG+          +P+  +++ +I    K+G+   ALS+  EM+  G       YN
Sbjct: 242 --PSVGL----------TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYN 289

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
             I     S R +E+ E+LR+ME  G  P   + ++  +          +++L+ +M  +
Sbjct: 290 MAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGR 349

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P   H    I    K G+  +A   L ++   G  PD   +++AI       R   A
Sbjct: 350 GVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEA 409

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           LEL +++ A    PD ++YN  I    K  +   A +L  +M TKGL P+V + N+ I  
Sbjct: 410 LELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRA 469

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            C      Q  L L R +  +  +P+VITY + I      G+ + A+ L  +M+E    P
Sbjct: 470 -CGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTP 528

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           + IT+ + I    K  R + A+   R M  +G+ PD+  + A I A+        A E+L
Sbjct: 529 DSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELL 588

Query: 664 KEM 666
           ++M
Sbjct: 589 RQM 591



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 217/529 (41%), Gaps = 64/529 (12%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P A+ +  +I   G  G  +EA  +  ++  +GL  P   SYN  + A  +S      
Sbjct: 246 LTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGL-TPETISYNMAIRACGRSGRWKEA 304

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L++M+  G   D  +    ++     GQ++ ++ + +E+   G     + F+  +VA
Sbjct: 305 VEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVA 364

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G+ +KA EL+  +    +  +  +F   I    K  R  +AL+L  +M       D
Sbjct: 365 CGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPD 424

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLV 260
           A  Y+  I    K  Q EMAL+L  +M   G+TP+    +  I +C + G     L LL 
Sbjct: 425 AISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR 484

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV------------ 308
           +   +    N +T   NS ++     G  ++A +LL  M +     D             
Sbjct: 485 QMPAQGLTPNVITY--NSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSK 542

Query: 309 ------GVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                  V +L    G  ++P+  S+   I+   K+G+ + A+ L R+M   G   NV  
Sbjct: 543 RGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVIT 602

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++I         E++ +LL+E++E+   P   + N       +R     AL+L+R+M 
Sbjct: 603 YNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMP 662

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                                               EG  PD++ Y++AI         +
Sbjct: 663 A-----------------------------------EGLTPDVISYTSAIRACNAEGEWE 687

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
            AL L   + AHG  P   +Y++ I    K  R  EA  L  EM  +GL
Sbjct: 688 KALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 229/493 (46%), Gaps = 40/493 (8%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTK--SGF---------ASDAAMYDVIIGGLCKNKQLEMA 224
           LIH F   S    +  L+ ++    S F               +  I+G L K     + 
Sbjct: 29  LIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIV 88

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTL-------LVKEIWEDRDVNTMTLLCN 277
           + L+ +M+ +GI  +   LS LI   S  G  +L       ++K+ +E   +   TL+  
Sbjct: 89  VSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLI-- 146

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
              + L   G I +A +        + +  +G ++          N  S+  +IN L K 
Sbjct: 147 ---KGLCLKGDIHKALHF------HDKVLALGFQL----------NQVSYRTLINGLCKV 187

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+   AL + R +       +V +YN +IDG+C    + ++++   EM      PT  T 
Sbjct: 188 GQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTY 247

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++   LC    +  A+ L+ KM ++   P V   ++L+   CK GK  EA      M++
Sbjct: 248 NTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +   P+IV Y++ + G   +  V+ A  +F  +   G  PDV +Y+I+ISG CK + V E
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  LF EM  K + P V TYN LI+G CKSG I  A+  +  M ++    P++ITY +L+
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR-GQPPNIITYNSLL 426

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           D LC     D AI L  ++++    P+  T+  LI GLCK  R + A   F  +   G  
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486

Query: 638 PDMFVFVALISAF 650
            D++ +  +I  F
Sbjct: 487 IDVYTYNTMIKGF 499



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 240/556 (43%), Gaps = 65/556 (11%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVK------ 57
           + SR+R +A   V   +    + F++P    FLI C  S      +  L+ Q+       
Sbjct: 2   LFSRSRFVA-FSVFITNFPNFQ-FLNPI---FLIHCFTSYSSFSNSTTLYSQLHNLVSSF 56

Query: 58  ----REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN 113
                +    P+   +  +L +L K+    +V    ++M+  G   +  TL+ L+  +  
Sbjct: 57  NHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQ 116

Query: 114 SGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
            G    + SVF+ I+  G+  D    + L+      G++ KA    +++     +LN+ +
Sbjct: 117 LGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVS 176

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           +  LI+G  K  +   AL++  ++       D  MY+ II G+CK+K +  A   YSEM 
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMV 236

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
              I P                              V   TL+C      L   G +  A
Sbjct: 237 AKRICPTV----------------------------VTYNTLICG-----LCIMGQLKDA 263

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL  MI                   ++P   +F I+++   K+GK+  A ++F  M +
Sbjct: 264 IGLLHKMILEN----------------INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                N+  YN+L++G C  N + ++  +   M + G  P   + + M    C+ + V  
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ L  +M  +   P V     LI  LCK G+   A + + +M   G  P+I+ Y++ + 
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLD 427

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            L     VD A+EL   +  H   P V  YNI+I+GLCK+ R+ +A+ +F +++  G   
Sbjct: 428 ALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNI 487

Query: 533 SVATYNLLINGWCKSG 548
            V TYN +I G+CK G
Sbjct: 488 DVYTYNTMIKGFCKKG 503



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 188/383 (49%), Gaps = 9/383 (2%)

Query: 288 SIDQAYNLLQAMIKGEPIA-DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           SI Q   +L +++K    +  V +   M F G ++ N  +  I+IN   + G   L+ S+
Sbjct: 68  SIIQFGKILGSLVKANHYSIVVSLHRQMEFNG-IASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  + + G   +      LI GLC    + ++     ++   GF+    +  ++   LC+
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 407 RQDVVGALNLVRKMRVQG---HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                 AL ++R  R+ G       V +NT+ I  +CK     +AF F ++MV +   P 
Sbjct: 187 VGQTKAALEMLR--RIDGKLVRLDVVMYNTI-IDGVCKDKLVNDAFDFYSEMVAKRICPT 243

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y+  I GL  + ++  A+ L   +      P V  ++I++   CK  +V EA+++F 
Sbjct: 244 VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV 303

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+ K + P++ TYN L+NG+C    +++A    + M  +   +PDV +Y+ +I G C  
Sbjct: 304 VMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM-AQIGVAPDVHSYSIMISGFCKI 362

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
              D+A+ L+ EM  K   P+ +T+ +LI GLCK  R   AL     M ++G  P++  +
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            +L+ A     +   A E+L ++
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKL 445



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 25/278 (8%)

Query: 8   ARRIAPLRVLAQDVVKSRCFM------------------SPGALGF--LIRCLGSVGLVE 47
           A+RI P  V    ++   C M                  +P    F  L+      G V+
Sbjct: 237 AKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVK 296

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  +F  + ++ +  PN  +YN L+   C    V+  E     M   G   D ++ + +
Sbjct: 297 EAKNVFVVMMKKDV-KPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIM 355

Query: 108 LQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C     D+A+ +F E+     + D   ++ L+    K G +  A +LI  M D   
Sbjct: 356 ISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ 415

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  T+  L+    K   VDKA++L  K+           Y+++I GLCK+ +L+ A +
Sbjct: 416 PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQK 475

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           ++ ++  +G   D    + +I     +G    ++ + W
Sbjct: 476 VFEDVLVNGYNIDVYTYNTMIKGFCKKG---FVIPQFW 510


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 260/549 (47%), Gaps = 34/549 (6%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           TL+ +++ Y N G F     + + I +++  + E  F ++  A+ K    +KA +L  RM
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG----FASDAAMYDVIIGGLC 216
            D+   + + K+F  +++  + +    + L+ +D +  S      + +   ++++I  LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMT 273
           K   ++ A++++  M      PD      L+   C +E   E  LL+ E+ +    +   
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSPSP 257

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ N ++  L   G + +   L+  M                 KG   PN  +++ +I+ 
Sbjct: 258 VIYNVLIDGLCKKGDLSRVTKLVDNMF---------------LKGCF-PNEVTYNTLIHG 301

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLD A+SL   M    C+ N   Y  LI+GL    R  +   LL  MEE G++  
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               + +   L +      A+ L +KM  +G  P +   + +I  LC+ GK  EA   L 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+  G LP++  YS+ + G       + A++++R++   GC  +   Y+++I GLC   
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML--EKESGSPDVI 571
           RV EA  ++++M+T G+ P    Y+ +I G C  G++D A+     ML  E+    PDV+
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK----CDRPRAALVH 627
           TY  L+DGLC+      A+ L N M ++GC P+ IT    +  L +    C+  R+ L  
Sbjct: 542 TYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEE 601

Query: 628 F--RMMKEK 634
              R++K +
Sbjct: 602 LVARLLKRQ 610



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 177/334 (52%), Gaps = 5/334 (1%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            +SPN  SF+++I  L K G +D A+ +FR M +  C+ + + Y  L+DGLC   R++E+
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIK 437
             LL EM+  G  P+    N +   LC++ D+     LV  M ++G  P  V +NTL I 
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL-IH 300

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC  GK  +A   L  MV    +P+ V Y   I GL+  +R      L   +   G   
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL 360

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           +   Y+++ISGL K  +  EA  L+ +M  KG  P++  Y+ +I+G C+ G  ++A   L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420

Query: 558 SRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           + M+   SG  P+V TY++L+ G    G  ++AI +W EM+E GC+ N   +  LI GLC
Sbjct: 421 NGMIS--SGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              R + A++ +  M   G+KPD   + ++I   
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 226/551 (41%), Gaps = 106/551 (19%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  L F  +I+ L  +G V+ A  +F  +  E  C+P+ Y+Y  L++ LCK   +D  
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMP-EKKCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
            + L EMQ  G          L+   C  G   +   + + +   G + +E  ++ L+  
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHG 301

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               G++DKA  L+ERM       N+ T+  LI+G VK+ R     +L   M + G+  +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
             +Y V+I GL K  + E A+ L+ +M   G  P+  + S +I                 
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDG--------------- 406

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                             L   G  ++A  +L  MI    +                PN 
Sbjct: 407 ------------------LCREGKPNEAKEILNGMISSGCL----------------PNV 432

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  ++    K G  + A+ ++REM + GC +N F Y+ LIDGLC   R++E+  +  +
Sbjct: 433 YTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSK 492

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G KP     +SM + LC    +  AL L  +M  Q  EP  +              
Sbjct: 493 MLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQ-EEPKSQ-------------- 537

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
                            PD+V Y+  + GL   K V  A++L   +   GC PDV+  N 
Sbjct: 538 -----------------PDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNT 580

Query: 505 ---------------------IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
                                +++ L K QRV+ A  +   M+ K L P  +T+ +++  
Sbjct: 581 FLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPE 640

Query: 544 WCKSGNIDQAM 554
            CK   I+ A+
Sbjct: 641 ICKPKKINAAI 651



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 8/347 (2%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           SF ++     K    + A+ LF  M  +  C ++V  +N++++ + N        E    
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 385 MEESG----FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +  S       P   + N + + LC+   V  A+ + R M  +   P       L+  LC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  +  EA   L +M  EG  P  V Y+  I GL     +    +L  ++   GC P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN-IDQAMLCLSR 559
            YN +I GLC   ++ +A  L   M++   IP+  TY  LING  K    +D A L +S 
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS- 352

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +E+     +   Y+ LI GL   G+ ++A+ LW +M EKGC PN + + A+I GLC+  
Sbjct: 353 -MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +P  A      M   G  P+++ + +L+  F        A +V +EM
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREM 458


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 236/520 (45%), Gaps = 39/520 (7%)

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           S W    KA E      + NI+L    +  +IH  V    +  A  L + + ++   S  
Sbjct: 42  SPW----KALEFFNAAPEKNIQL----YSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHK 93

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +             ++A    S +K S  TP+  +  +LI     + EL      ++ 
Sbjct: 94  PYH-----------ACQLAFSELSRLKSSKFTPN--VYGELIIVLC-KMELVEEALSMYH 139

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                     CN ++ +LV  G  +  + + + MI                   +SP+  
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISN----------------GLSPSVI 183

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F  +I+   + G L  A  +F EM   G +  V +Y  LI GLC+ N++EE+  + R M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G  P  +T N++    C+  +   AL L + M  +G  P V    +LI  LCK G+ 
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A     +M++    P+I  Y++ I     +  V  A+ LF ++      PDV  Y+I+
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I GLC   R  EA ++F +M  +G++ +  TYN LI+G CK G +D+A+   S+M E   
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN-G 422

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             P+VIT++TLIDG C       A+ +++EM  K  +P+ +T+ A+I G CK    + AL
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             +  M + G+ P+ +    L+     +     A E+  E
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 247/506 (48%), Gaps = 42/506 (8%)

Query: 167 RLNEKTFCVLIHG-----FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           RL    F   ++G       K   V++AL ++ K+   G A      +V++  L K  + 
Sbjct: 107 RLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRF 163

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSI 279
           E+  ++Y EM  +G++P       LI  C  +G+L L  +E++++  V  +  T++  +I
Sbjct: 164 ELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL-LRAQEMFDEMRVKGIVPTVIVYTI 222

Query: 280 M-RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           + R L S+  I++A ++ +AM       +VGV           PN  +++ +++   K  
Sbjct: 223 LIRGLCSDNKIEEAESMHRAM------REVGV----------YPNVYTYNTLMDGYCKLA 266

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
               AL L+++M   G + +V  +  LIDGLC    ++ +  L   M +    P     N
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C+  DV  A+ L  ++      P V   ++LI+ LC   +  EA      M +E
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G L + V Y++ I G     ++D ALE+   +  +G  P+V+ ++ +I G CK + +  A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             +++EM+ K L P V TY  +I+G CK G++ +A+   S ML+    +P+  T + L+D
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN-GITPNCYTISCLLD 505

Query: 579 GLCIAGRPDDAIMLWNE----------MEEKGCAP---NRITFMALITGLCKCDRPRAAL 625
           GLC  G+  DA+ L+ E          ++  G  P   N + + ALI GLC+  +   A+
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFL 651
             F  M+  G++PD  ++V ++    
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGLF 591



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 199/400 (49%), Gaps = 14/400 (3%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKG-----EPIADVGV---EMLMIFKGTVSPNTSS 326
           L ++I+ +LV +  +  A  LL  +++      +P     +   E+  +     +PN   
Sbjct: 60  LYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYG 119

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
             II+  L K   ++ ALS++    ++G    +   N L+  L  + R E  + +  EM 
Sbjct: 120 ELIIV--LCKMELVEEALSMYH---KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMI 174

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
            +G  P+  T  ++    CR+ D++ A  +  +MRV+G  P V   T+LI+ LC   K  
Sbjct: 175 SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIE 234

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA      M + G  P++  Y+  + G   +     AL L++D+   G  PDVV + I+I
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            GLCK   +  A +LF  MI   + P++A YN LI+ +CK G++ +AM  L   LE+   
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM-ALFLELERFEV 353

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           SPDV TY+ LI GLC   R ++A  ++ +M ++G   N +T+ +LI G CK  +   AL 
Sbjct: 354 SPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALE 413

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               M E G++P++  F  LI  +    N   A  +  EM
Sbjct: 414 ICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM 453



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 226/496 (45%), Gaps = 35/496 (7%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            PN Y      E +   C ++LVE  L      G          LL V   +G+F+    
Sbjct: 114 TPNVYG-----ELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWR 168

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           ++ E+I +G     + F  L+    + G++ +A E+ + M    I      + +LI G  
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
             +++++A  +   M + G   +   Y+ ++ G CK    + AL+LY +M G G+ PD  
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVV 288

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMI 300
               LI      GE+                 L  N I   +  N ++   YN L+ A  
Sbjct: 289 TFGILIDGLCKFGEMK------------AARNLFVNMIKFSVTPNIAV---YNSLIDAYC 333

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K   +++     L + +  VSP+  ++ I+I  L    + + A ++F +MT+ G + N  
Sbjct: 334 KVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSV 393

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN+LIDG C   +++++ E+  +M E+G +P   T +++    C+ +++  A+ +  +M
Sbjct: 394 TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM 453

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            ++   P V   T +I   CK+G   EA +  +DM+  G  P+    S  + GL    ++
Sbjct: 454 VIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKI 513

Query: 481 DLALELFRD----------ICAHGCCPDV---VAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             ALELF +          + A G  P +   VAY  +I GLC+  + ++A  LF++M  
Sbjct: 514 SDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRR 573

Query: 528 KGLIPSVATYNLLING 543
            GL P    Y +++ G
Sbjct: 574 YGLQPDEVIYVVMLRG 589



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 210/494 (42%), Gaps = 68/494 (13%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP  + F  LI      G +  A  +FD+++ +G+ VP    Y  L+  LC    ++  
Sbjct: 178 LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI-VPTVIVYTILIRGLCSDNKIEEA 236

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           E   + M++ G   + YT   L+  YC      +AL ++ +++  G V + V F IL+  
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K+GE+  A  L   M   ++  N   +  LI  + K   V +A+ LF ++ +   + D
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y ++I GLC   + E A  ++ +M   GI  +    + LI  C  EG++        
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKM-------- 408

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                                    D+A  +   M +       GVE          PN 
Sbjct: 409 -------------------------DKALEICSQMTEN------GVE----------PNV 427

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F  +I+   K   L  A+ ++ EM       +V  Y  +IDG C    ++E+ +L  +
Sbjct: 428 ITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSD 487

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNL-VRKMRVQ---------GHEPWVKHN-- 432
           M ++G  P  +T++ +   LC+   +  AL L   K+  Q         G +P + ++  
Sbjct: 488 MLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVA 547

Query: 433 -TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T LI  LC+ G+  +A +  +DM + G  PD V Y   + GL  +K + + L    D+ 
Sbjct: 548 YTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLH--ADML 605

Query: 492 AHGCCPDVVAYNII 505
             G  P+   + I+
Sbjct: 606 KFGVIPNSAVHVIL 619


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 257/546 (47%), Gaps = 13/546 (2%)

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
           Q  C     D A+++F+ ++D   +   V F+ +L   +K      A +L   M+   + 
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
               TF +LI+ F    ++D A  +  K+ K G   +   +  ++ G C N ++  AL +
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 228 YSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           Y EM    I  D  +   LI     +          L++++ E + V    ++ N+++  
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +G+I++A  L   MI      D+     +I+    +        ++N    + K+D 
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDE 266

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LF  M + G   ++  YN L++G C +N++ E+ +L   M E G +P   T   +  
Sbjct: 267 ARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMH 326

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C    V  A NL   M  +G  P V    +LIK  CK  +  EA   L DM  +  +P
Sbjct: 327 GYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVP 386

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC---PDVVAYNIIISGLCKAQRVAEAE 519
           +I+ Y++ + GL     +  A +L  ++  H CC   PDV  YNI++  LC+ + V +A 
Sbjct: 387 NIITYNSVVDGLCKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRIECVEKAI 444

Query: 520 DLFNEMI-TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             F  +I  +   P+V +YN+LI+G CK+  +D+A+   + M  K    PD++TY  L+D
Sbjct: 445 AFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNL-VPDIVTYNILLD 503

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            L    + D AI L  ++ ++G +PN  T+  LI GL K  RP+ A      +  +G  P
Sbjct: 504 ALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHP 563

Query: 639 DMFVFV 644
           D+  ++
Sbjct: 564 DVKTYI 569



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 234/508 (46%), Gaps = 47/508 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T   L+  +C+ GQ D A SV  +I+  G     V F+ L+  F    ++  A  + + M
Sbjct: 91  TFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEM 150

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDK---ALQLFDKMTKSGFAS-DAAMYDVIIGGLCK 217
               IR ++  +  LI+G  K S++ K   A+QL  KM +      +  MY+ ++ GLCK
Sbjct: 151 VARRIRFDDVLYGTLINGLCK-SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
           +  +  A  L S+M   GI PD    S LI      G+     KE+              
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQR----KEV-------------T 252

Query: 278 SIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLM--------------IFKGTV-- 320
           S++     N  +D+A  L   MI +GE    +   +LM              +F   V  
Sbjct: 253 SLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVER 312

Query: 321 --SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P+T ++ I+++      K+D A +LF  M + G + +V+ YN LI G C   R+ E+
Sbjct: 313 GEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEA 372

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTLLIK 437
             LL +M      P   T NS+   LC+   ++ A  LV +M      P  V    +L++
Sbjct: 373 MNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLE 432

Query: 438 ELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
            LC+     +A  F   ++ E  F P++  Y+  I G    +R+D A+ LF  +C     
Sbjct: 433 SLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLV 492

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD+V YNI++  L   Q++ +A  L  +++ +G+ P++ TYN+LING  K G    A   
Sbjct: 493 PDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQK- 551

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +S  L      PDV TY  +I+ LC  G
Sbjct: 552 ISLYLSIRGYHPDVKTY--IINELCKGG 577



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 20/334 (5%)

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K   +D A++LF  M  +  + ++  +  ++  +        + +L   ME  G  P   
Sbjct: 31  KFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTV 90

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +  C C    +  A +++ K+   G  P V   T L+K  C + K ++A     +M
Sbjct: 91  TFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEM 150

Query: 456 VQEGFLPDIVCYSAAIGGLID--IKRVDLALELFRDICAHGCC-PDVVAYNIIISGLCKA 512
           V      D V Y   I GL    I +   A++L + +       P+++ YN ++ GLCK 
Sbjct: 151 VARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKD 210

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN----------------IDQAMLC 556
             + EA  L ++MI +G+ P + TY+ LI G C++G                 +D+A   
Sbjct: 211 GNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAREL 270

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            + M+E+     D+I Y  L++G C+  +  +A  L++ M E+G  P+ IT+  L+ G C
Sbjct: 271 FNVMIERGE-QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             D+   A   F  M E+G+ PD++ +  LI  +
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGY 363



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 195/429 (45%), Gaps = 45/429 (10%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           C   +G    A  L  +++   L  PN   YN ++  LCK  +++   +   +M   G  
Sbjct: 170 CKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIF 229

Query: 99  YDKYTLTPLLQVYCNSGQ----------------FDKALSVFNEIIDHGWVDEHV-FSIL 141
            D +T + L+   C +GQ                 D+A  +FN +I+ G   + + ++IL
Sbjct: 230 PDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNIL 289

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  +    +V +A +L   M +   + +  T+ +L+HG+    +VD+A  LF  M + G 
Sbjct: 290 MNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGL 349

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTL-- 258
             D   Y+++I G CK +++  A+ L  +M    + P+    + ++   C   G L    
Sbjct: 350 VPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWK 409

Query: 259 LVKEIW----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           LV E+        DV T  +L  S+ RI     +I        A  K            +
Sbjct: 410 LVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAI--------AFFKH-----------L 450

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           IF+ + +PN  S++I+I+   K+ +LD A++LF  M     + ++  YN L+D L N  +
Sbjct: 451 IFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQ 510

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L+++  LL ++ + G  P   T N +   L +      A  +   + ++G+ P VK  T 
Sbjct: 511 LDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVK--TY 568

Query: 435 LIKELCKHG 443
           +I ELCK G
Sbjct: 569 IINELCKGG 577



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 36/182 (19%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +  VE+A   F  +  E    PN +SYN L+   CK+  +D        M   
Sbjct: 430 LLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFK 489

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
               D  T   LL    N  Q DKA+++  +I+D G                        
Sbjct: 490 NLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQG------------------------ 525

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
                     I  N +T+ +LI+G  K  R   A ++   ++  G+  D   Y  II  L
Sbjct: 526 ----------ISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINEL 573

Query: 216 CK 217
           CK
Sbjct: 574 CK 575


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 260/616 (42%), Gaps = 91/616 (14%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L+RA   A   +L + +++ R   +    G   R L  +G   +A  L   + R G C
Sbjct: 153 STLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHG-C 211

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+   Y  ++ AL     V      L EM   G   D  T   ++   C  G   +A  
Sbjct: 212 VPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAAR 271

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + + ++ HG     V +  LL    +  + D+A  ++ R+ + N+ +       +I G +
Sbjct: 272 LVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM----LNTVIRGCL 327

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            + ++ +A +L++ M   G   D   Y++++ GLCK  +   A+++  EM+  G  P+  
Sbjct: 328 AEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIV 387

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S L+ S    G        +W+D                  +   +DQ          
Sbjct: 388 TYSTLLHSFCRNG--------MWDD------------------ARAMLDQ---------- 411

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                       M  KG  S N+  ++ II  L KDGKLD A+ L +EM   GC  ++  
Sbjct: 412 ------------MSAKG-FSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +I  LCN+++++E+  +   + E G      T N+                      
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT---------------------- 496

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                        LI  L   G+  E  R   +MV  G   D+V Y+  I  L     VD
Sbjct: 497 -------------LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ++ L  ++   G  P+  +YN++I+ LCKA +V +A +L  EM+ +GL P + TYN LI
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           NG CK G    A L L   L  E+  PD++TY  LI   C     DDA ML ++    G 
Sbjct: 604 NGLCKVG-WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 602 APNRITFMALITGLCK 617
            PN  T+  ++    +
Sbjct: 663 VPNERTWGMMVQNFVR 678



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 245/598 (40%), Gaps = 90/598 (15%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           L DQ+ R     P+  SYN +L  L ++ C  D + +  + ++D       +T     + 
Sbjct: 131 LLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDR-VPPTTFTFGVAARA 189

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
            C  G+   AL++   +  HG V + V                                 
Sbjct: 190 LCRLGRARDALALLRGMARHGCVPDAVL-------------------------------- 217

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             +  +IH  V +  V +A  L D+M   G A+D   ++ ++ GLC    +  A +L   
Sbjct: 218 --YQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDR 275

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G TP       L+                                 R L      D
Sbjct: 276 MMMHGCTPSVVTYGFLL---------------------------------RGLCRTRQAD 302

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY +L        + +V V ML              + +I   L +GKL  A  L+  M
Sbjct: 303 EAYAMLGR------VPEVNVVML--------------NTVIRGCLAEGKLARATELYEMM 342

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +V  YN L+ GLC   R   +  +L EMEE G  P   T +++    CR    
Sbjct: 343 GSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 402

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  ++ +M  +G     +    +I  L K GK  EA R + +M  +G  PDI  Y+  
Sbjct: 403 DDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTI 462

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L +  ++D A  +F ++   G   + + YN +I  L  + R  E   L NEM+  G 
Sbjct: 463 IYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGC 522

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              V +YN LI   CK GN+D++M+ L  M+ K    P+  +Y  LI+ LC AG+  DA+
Sbjct: 523 PLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK-GIKPNNFSYNMLINELCKAGKVRDAL 581

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  EM  +G  P+ +T+  LI GLCK     AAL     +  + + PD+  +  LIS
Sbjct: 582 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 183/413 (44%), Gaps = 43/413 (10%)

Query: 291 QAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++YN +L  + + +  AD  +    + +  V P T +F +    L + G+   AL+L R 
Sbjct: 146 RSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRG 205

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC+ +  LY  +I  L     + E+  LL EM   G      T N +   LC    
Sbjct: 206 MARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGH 265

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI--VCY 467
           V  A  LV +M + G  P V     L++ LC+  +A EA+  L      G +P++  V  
Sbjct: 266 VREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML------GRVPEVNVVML 319

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I G +   ++  A EL+  + + GC PDV  YNI++ GLCK  R   A  + +EM  
Sbjct: 320 NTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM--------------------------- 560
           KG  P++ TY+ L++ +C++G  D A   L +M                           
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439

Query: 561 -------LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                  ++ +   PD+ TY T+I  LC   + D+A  ++  + E+G   N IT+  LI 
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            L    R +  L     M   G   D+  +  LI A   E N   +  +L+EM
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 171/378 (45%), Gaps = 20/378 (5%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           L  +IR   + G +  A  L++ +  +G C P+ ++YN L+  LCK          L EM
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKG-CPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEV 151
           ++ G   +  T + LL  +C +G +D A ++ +++   G+ ++   ++ ++ A  K G++
Sbjct: 378 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A  L++ M     + +  T+  +I+      ++D+A  +F  + + G  ++   Y+ +
Sbjct: 438 DEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTL 497

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
           I  L  + + +  L+L +EM   G   D    + LI +   EG +  ++++ E    + +
Sbjct: 498 IHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGI 557

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                  N ++  L   G +  A  L + M+                +G ++P+  +++ 
Sbjct: 558 KPNNFSYNMLINELCKAGKVRDALELSKEMLN---------------QG-LTPDIVTYNT 601

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN L K G    AL+L  ++       ++  YN LI   C    L+++  LL +    G
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGG 661

Query: 390 FKPTHFTLNSMFRCLCRR 407
             P   T   M +   R+
Sbjct: 662 IVPNERTWGMMVQNFVRQ 679



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 51/115 (44%)

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A+  L +M  + + +P   +Y  ++  L  A    DA++L+  M      P   TF   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              LC+  R R AL   R M   G  PD  ++  +I A +++     A  +L EM
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM 241


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 250/548 (45%), Gaps = 56/548 (10%)

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           ++ ++  G V D    + LLV  ++      A  L + M       + K + V+I   V+
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++LFD+M  +G   D  +Y + I GLCK +  + ALQ+  +M+ +G  P    
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP---- 253

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-- 300
                                WE        L  +S++ +LV  G +D+A  L   M+  
Sbjct: 254 ---------------------WE--------LTYSSVVDVLVKVGRMDEALRLKDQMLLA 284

Query: 301 KGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKDGKLDL 342
            G+ +  V   MLM                  +    V+P   ++ ++I     +G  D 
Sbjct: 285 TGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDE 344

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
              L R+M + G + + + +N +I GL    R +++  LL  + ++G  P  FT   +  
Sbjct: 345 TYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIH 403

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+ Q +  A+NL  KM+  G +P +     L+   C+ G+  EA +  ++M  +GF P
Sbjct: 404 WLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPP 463

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V Y+  + G I  K  D A  L  ++  +G       YNI+I+GL    RV E +++ 
Sbjct: 464 NEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEML 523

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
              +++G +P+  TYN +ING+ K+G +  A   + R + K+  +P+++TYT+ IDG C 
Sbjct: 524 KRFLSEGFVPTTMTYNSIINGFVKAGMMGSA-FGMYRQMRKKGITPNIVTYTSFIDGYCR 582

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
               D A+ L   +   G  P+   + A I   CK      AL    ++ + G+ PD+ V
Sbjct: 583 TNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTV 642

Query: 643 FVALISAF 650
           + + ++ +
Sbjct: 643 YNSFVTGY 650



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 251/556 (45%), Gaps = 24/556 (4%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE--MQDYGWGYDKYTLTPLLQVYCNSG 115
           RE    P   +Y+ +++ L K   +D   +RLK+  +   G   D    T L+  YC  G
Sbjct: 247 REAGFEPWELTYSSVVDVLVKVGRMDEA-LRLKDQMLLATGKKMDVVLATMLMHGYCLHG 305

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +  KAL +F+E++  G    +V + +L+      G  D+  +L  +M +  + L+   F 
Sbjct: 306 EVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFN 365

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I G ++  R   A+ L + +  +G   D   Y  +I  LCK+++L  A+ L+ +MK +
Sbjct: 366 LVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEA 424

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G+ P       L+    ++G +   +K   E  D+      +   ++M+  +   + D A
Sbjct: 425 GVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNA 484

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           Y LL  M                 +  VS    +++I+IN L    ++     + +    
Sbjct: 485 YALLNEM----------------RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G +     YN++I+G   +  +  ++ + R+M + G  P   T  S     CR      
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ L+  +R  G +P +      I   CK G    A  FL  ++++G  PD+  Y++ + 
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  ++K +  A + +  +       D   Y  +I G  K   VA A +L++EM+   +IP
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
              T+  L +G C+SG+ID A   L  M  +   SP+++TY  LI+     G+  +A  L
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDM-RRLDVSPNIVTYNMLINACVRDGKLQEAFQL 767

Query: 593 WNEMEEKGCAPNRITF 608
            +EM   G  P+  T+
Sbjct: 768 HDEMLSSGVVPDDTTY 783



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 6/355 (1%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +G V    S  D+++ T       D AL+LF EM   GC  +  +Y+ +I       
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAAD-ALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
              ++  L  EM  +G KP           LC+ +D   AL ++ KMR  G EPW    +
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 434 LLIKELCKHGKAMEAFRFLTDMV-QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++  L K G+  EA R    M+   G   D+V  +  + G      V  AL+LF ++ +
Sbjct: 260 SVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVS 319

Query: 493 HGCCPDVVAYNIIISGLCKAQRVA-EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G  P  V Y ++I G C A+ ++ E   L  +MI +GL+ S   +NL+I G  +     
Sbjct: 320 DGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A+  L   L  ++G PDV TY  LI  LC   +  +A+ LW++M+E G  P+ +T+ +L
Sbjct: 379 DAIGLLE--LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + G C+  R   AL  +  M +KG  P+   +  L+  ++ +     A+ +L EM
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 33/396 (8%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L     + EA  L+D++K  G+  P+  +Y+ LL   C+   +D       EM 
Sbjct: 399 GCLIHWLCKHQKLHEAVNLWDKMKEAGV-KPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
           D G+  ++ T T L++ Y     FD A ++ NE+  +G    ++ ++IL+        V 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +  E+++R           T+  +I+GFVK   +  A  ++ +M K G   +   Y   I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-------LTLLVKEIWE 265
            G C+    ++A++L   ++  GI PD    +  I +   +G        L LL+K+   
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD--- 634

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---------- 315
              +     + NS +    +   + +A     +MIK   +AD  +   +I          
Sbjct: 635 --GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVA 692

Query: 316 ---------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        V P+  +F  + + L + G +D A  L  +M ++    N+  YN LI
Sbjct: 693 FALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLI 752

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           +      +L+E+++L  EM  SG  P   T + + R
Sbjct: 753 NACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           ++ M+T+G++P   +   L+    +  +   A+     M  K   + D   Y  +I    
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYA-DAKMYDVVIRACV 196

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G   DA+ L++EM   G  P+   +   I+GLCK      AL     M+E G +P   
Sbjct: 197 RGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 642 VFVALISAFL 651
            + +++   +
Sbjct: 257 TYSSVVDVLV 266


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 256/587 (43%), Gaps = 57/587 (9%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKRE-GLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           GAL   I      G  + A   F + + + G   P    YN LL+AL +   V  V    
Sbjct: 91  GALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVY 150

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKW 148
             M+  G   + YT   L++  C + +   A  + +E+   G   DE   + ++ A  K 
Sbjct: 151 DNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKL 210

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             +D+A  ++  M       N      ++H    + R+ +   + D+M   G   D   Y
Sbjct: 211 DRLDEARGILAEMTPVGASYN-----AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAY 265

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             I+G  CK ++L MA  + + M   G  P+ +               T+LVK  ++D  
Sbjct: 266 TSIVGAFCKARELRMACAILARMVTEGCVPNVQTF-------------TVLVKGFFDD-- 310

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                             G +  A               +G+   M+ +G  +P+T S++
Sbjct: 311 ------------------GKVHDA---------------LGMWNWMVAEGW-APSTISYN 336

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I  L   G L  AL +F  M +  C+ +V  Y+ LIDG   +  L+ +  +  +M  +
Sbjct: 337 VLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G KP      +M   LC++     A NL+ KM ++   P       LI+ LC  G+A  A
Sbjct: 397 GCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRA 456

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M + G  P+   Y+  + GL      + AL +  ++  HG    +V+YN  ISG
Sbjct: 457 LNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISG 516

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC+ + + EA  L   MI +G+ P   T+N +I+ +CK GN+  A   L RM +  +   
Sbjct: 517 LCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRM-DAVNCPR 575

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           +++ YT+L+ GLC   + DDA++   +M  +G  PN  T+  L+ G+
Sbjct: 576 NIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 182/377 (48%), Gaps = 7/377 (1%)

Query: 291 QAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           + YN LL A+++   +A V      + K  V PN  +++++I  L ++ ++  A  +  E
Sbjct: 128 RVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDE 187

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC  +   +  +I  LC  +RL+E+  +L EM      P   + N++   LC +  
Sbjct: 188 MARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCGQFR 242

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +     +V +M  +G  P     T ++   CK  +   A   L  MV EG +P++  ++ 
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + G  D  +V  AL ++  + A G  P  ++YN++I GLC    +  A  +F+ M    
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            +P V TY+ LI+G+ K+G++D AM   + M       P+V+ YT ++D LC     D A
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDM-TNAGCKPNVVVYTNMVDVLCKKVMFDQA 421

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L ++M  + C PN +TF  LI  LC   R   AL  F  M+  G  P+   +  L+  
Sbjct: 422 ENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHG 481

Query: 650 FLSELNPPLAFEVLKEM 666
              E N   A  +L EM
Sbjct: 482 LFREGNCEDALRMLTEM 498



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 228/555 (41%), Gaps = 92/555 (16%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAA- 206
           G++D     ++ M    +   E      I  F +    D+AL+ F +     G A+    
Sbjct: 69  GDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVR 128

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+ ++  L +   +   + +Y  M+ +G+ P+                           
Sbjct: 129 VYNHLLDALLRENLVAAVVPVYDNMRKAGVEPN--------------------------- 161

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             V T  LL    ++ L  N  +  A  +L  M +               KG   P+  S
Sbjct: 162 --VYTYNLL----IKALCQNDRVGAARRMLDEMAR---------------KG-CRPDEVS 199

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
              II+ L K  +LD A  +  EMT +G       YN ++  LC   R+ E + ++ EM 
Sbjct: 200 HTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHALCGQFRMREVFLVVDEMV 254

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G +P      S+    C+ +++  A  ++ +M  +G  P V+  T+L+K     GK  
Sbjct: 255 HRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVH 314

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +A      MV EG+ P  + Y+  I GL  I  +  AL +F  +    C PDV  Y+ +I
Sbjct: 315 DALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLI 374

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G  KA  +  A  ++N+M   G  P+V  Y  +++  CK    DQA   + +M   E+ 
Sbjct: 375 DGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKM-SLENC 433

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK--------- 617
            P+ +T+ TLI  LC  GR   A+ +++ M   GC PN  T+  L+ GL +         
Sbjct: 434 PPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALR 493

Query: 618 ----------------CDRPRAALVHFRMMKE----------KGMKPDMFVFVALISAFL 651
                            +   + L   RM+KE          +G++PD F F A+I A+ 
Sbjct: 494 MLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC 553

Query: 652 SELNPPLAFEVLKEM 666
            E N   A  +L  M
Sbjct: 554 KEGNVRAAAWMLGRM 568



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/478 (22%), Positives = 193/478 (40%), Gaps = 104/478 (21%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+ L     V  A  + D++ R+G C P+  S+  ++ ALCK   +D     L EM  
Sbjct: 167 LLIKALCQNDRVGAARRMLDEMARKG-CRPDEVSHTTIISALCKLDRLDEARGILAEMTP 225

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G  Y+      ++   C   +  +   V +E++  G   + V ++ ++ AF K  E+  
Sbjct: 226 VGASYNA-----VVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRM 280

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           AC ++ RM       N +TF VL+ GF    +V  AL +++ M   G+A     Y+V+I 
Sbjct: 281 ACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIR 340

Query: 214 GLC-----------------------------------KNKQLEMALQLYSEMKGSGITP 238
           GLC                                   K   L++A+ ++++M  +G  P
Sbjct: 341 GLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKP 400

Query: 239 DFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI---- 289
           +  + + ++   C     D+ E  L+ K   E+   NT+T   N+++R L   G      
Sbjct: 401 NVVVYTNMVDVLCKKVMFDQAE-NLIDKMSLENCPPNTLTF--NTLIRSLCDLGRAGRAL 457

Query: 290 --------------DQAYN-LLQAMIKGEPIADV----------GVEMLMIFKGT----- 319
                         D+ YN LL  + +     D           G E+ ++   T     
Sbjct: 458 NVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGL 517

Query: 320 --------------------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                               + P+  +F+ II+   K+G +  A  +   M  + C +N+
Sbjct: 518 CQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNI 577

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
             Y +L+ GLC+ ++L+++   L +M   G  P   T N + R +      +G ++L+
Sbjct: 578 VAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLI 635


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 274/557 (49%), Gaps = 22/557 (3%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L   +VK     SP  + +  +I      G V +A  LF ++ ++G+ VP+  +Y+  ++
Sbjct: 212 LLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGV-VPDVVTYSSYID 270

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV- 133
           ALCK+ ++D  E+ L++M   G+  DK T   ++  Y   GQ+ +   +F E+   G + 
Sbjct: 271 ALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMP 330

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D    +  + +  K G+  +A E  + M     + +  T+ VL+HG+  +  V   L LF
Sbjct: 331 DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLF 390

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + M  +G  +D ++Y+++I    K   ++ A+ ++++M+  G+ PD      +I + S  
Sbjct: 391 NSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRM 450

Query: 254 GELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           G L   + +  +     +   T++ NS+++    +G++ +A  L+  M+           
Sbjct: 451 GRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS---------- 500

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                +G   PNT  F+ IIN+L K+G++  A  +F  +  IG   +V  +N+LIDG   
Sbjct: 501 -----RGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGL 555

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             ++E+++ +L  M   G +P   T +++    CR   +   L L R+M  +G +P    
Sbjct: 556 VGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTIT 615

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +++  L   G+ + A +   +M++ G   DI      +GGL      D A+ LF+ + 
Sbjct: 616 YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLG 675

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A     ++   N +I  + K ++  EA +LF+ +   GL+P+ +TY ++I    K G+++
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVE 735

Query: 552 QAMLCLSRMLEKESGSP 568
           +A    S ++EK   +P
Sbjct: 736 EADNMFS-LMEKSGCAP 751



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 289/629 (45%), Gaps = 33/629 (5%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLK 90
           L++CL      ++A N+L  ++   G+  P+  SY+ +L++LC+      ++DL+   +K
Sbjct: 160 LLKCLCHAKRSDDAVNVLLHRMPELGV-EPDTISYSTVLKSLCEDSRSQRALDLLHTMVK 218

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
             +  G   +  +   ++  +   G+  KA ++F+E++  G V + V +S  + A  K  
Sbjct: 219 --KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKAR 276

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +DKA  ++ +M       ++ T+  +IHG+    +  +   +F +MT+ G   D    +
Sbjct: 277 AMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             +  LCK+ + + A + +  M   G  PD    S L+   + EG +            V
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYV------------V 384

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTS 325
           + + L  +     +V++ S+   YN+L        + D   E ++IF    +  V P+  
Sbjct: 385 DMLNLFNSMEGNGIVADHSV---YNILIDAYGKRGMMD---EAMLIFTQMQERGVMPDAW 438

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I    + G+L  A+  F +M  +G   +  +YN+LI G C    L ++ EL+ EM
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 386 EESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
              G  +P     NS+   LC+   VV A ++   +   G  P V     LI      GK
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +AF  L  M+  G  PD+V YSA + G     R+D  L LFR++ + G  P  + Y I
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           I+ GL    R   A+ + +EMI  G    ++T  +++ G C++ N D   + L + L   
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN-NCDDEAIALFKKLGAM 677

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           +   ++    T+ID +    + ++A  L++ +   G  PN  T+  +IT L K      A
Sbjct: 678 NVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEA 737

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              F +M++ G  P   +   +I   L +
Sbjct: 738 DNMFSLMEKSGCAPSSRLLNNIIRVLLEK 766



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 149/633 (23%), Positives = 274/633 (43%), Gaps = 33/633 (5%)

Query: 52  LFDQVKRE----GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           LF+++ RE     + +P   +YN L++  C++    +           G   D      L
Sbjct: 101 LFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANIL 160

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERM--DD 163
           L+  C++ + D A++V    +    V  D   +S +L +  +     +A +L+  M    
Sbjct: 161 LKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS 220

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
                N  ++  +IHGF ++  V KA  LF +M + G   D   Y   I  LCK + ++ 
Sbjct: 221 GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDK 280

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIM 280
           A  +  +M  +G  PD    + +I   S  G   E   + +E+   R +      CNS M
Sbjct: 281 AELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR-RGLMPDIFTCNSYM 339

Query: 281 RILVSNGSIDQAYNLLQAM---------------IKGEPIADVGVEMLMIFKGT----VS 321
             L  +G   +A     +M               + G       V+ML +F       + 
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIV 399

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            + S ++I+I+   K G +D A+ +F +M + G M + + Y  +I       RL ++ + 
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELC 440
             +M   G KP     NS+ +  C   ++V A  L+ +M  +G   P       +I  LC
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLC 519

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+ +EA      ++  G  PD++ +++ I G   + +++ A  +   + + G  PDVV
Sbjct: 520 KEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVV 579

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y+ ++ G C+  R+ +   LF EM++KG+ P+  TY ++++G    G    A      M
Sbjct: 580 TYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM 639

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +E  + + D+ T   ++ GLC     D+AI L+ ++       N      +I  + K  +
Sbjct: 640 IESGT-TMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              A   F  +   G+ P+   +  +I+  L E
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKE 731



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 162/345 (46%), Gaps = 8/345 (2%)

Query: 329 IIINTLLK----DGKLDLALS-LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           I+ N LLK      + D A++ L   M ++G   +   Y+ ++  LC  +R + + +LL 
Sbjct: 155 IVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLH 214

Query: 384 EM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            M  +  G  P   + N++     R  +V  A NL  +M  QG  P V   +  I  LCK
Sbjct: 215 TMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCK 274

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                +A   L  M+  GF PD V Y+  I G   + +      +FR++   G  PD+  
Sbjct: 275 ARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFT 334

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            N  +S LCK  +  EA + F+ M  KG  P + TY++L++G+   G +   ML L   +
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD-MLNLFNSM 393

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           E      D   Y  LID     G  D+A++++ +M+E+G  P+  T+  +I    +  R 
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A+  F  M   G+KPD  V+ +LI  F    N   A E++ EM
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 157/358 (43%), Gaps = 45/358 (12%)

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFL-----YNNLIDGLCNSNRLEESYELLREMEESGF 390
           +DG   LA++LF  + +      V L     YN L+D  C ++R    + L     ++G 
Sbjct: 92  RDGP-SLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGL 150

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALN-LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           K      N + +CLC  +    A+N L+ +M   G EP     + ++K LC+  ++  A 
Sbjct: 151 KTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRAL 210

Query: 450 RFLTDMVQE--GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
             L  MV++  G  P++V Y+  I G      V  A  LF ++   G  PDVV Y+  I 
Sbjct: 211 DLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYID 270

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW----------------------- 544
            LCKA+ + +AE +  +MI+ G  P   TYN +I+G+                       
Sbjct: 271 ALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMP 330

Query: 545 ------------CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
                       CK G   +A      M  K    PD++TY+ L+ G    G   D + L
Sbjct: 331 DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAK-GHKPDLVTYSVLLHGYAAEGYVVDMLNL 389

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +N ME  G   +   +  LI    K      A++ F  M+E+G+ PD + +  +I+AF
Sbjct: 390 FNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAF 447



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 171/375 (45%), Gaps = 26/375 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G  G+++EA ++F Q++  G+ +P+ ++Y  ++ A  +   +     +  +M   
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGV-MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G   D      L+Q +C  G   KA  + +E++  G    +   F+ ++ +  K G V +
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A ++ + +     R +  TF  LI G+    +++KA  + D M   G   D   Y  ++ 
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G C+N +++  L L+ EM   G+ P       ++    ++G  T+  K++  +   +  T
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR-TVGAKKMCHEMIESGTT 645

Query: 274 L---LCNSIMRILVSNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFK---------- 317
           +    C  I+  L  N   D+A  L   L AM     IA +   +  ++K          
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705

Query: 318 -GTVS-----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
             ++S     PN S++ ++I  LLK+G ++ A ++F  M + GC  +  L NN+I  L  
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765

Query: 372 SNRLEESYELLREME 386
              + ++   L +++
Sbjct: 766 KGEISKAGNYLSKVD 780



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 7/192 (3%)

Query: 482 LALELFRDICAHGC-----CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           LA+ LF  IC          P V  YNI++   C+A R      LF   +  GL   V  
Sbjct: 97  LAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIV 156

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+L+   C +   D A+  L   + +    PD I+Y+T++  LC   R   A+ L + M
Sbjct: 157 ANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTM 216

Query: 597 EEK--GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            +K  GC+PN +++  +I G  +      A   F  M ++G+ PD+  + + I A     
Sbjct: 217 VKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKAR 276

Query: 655 NPPLAFEVLKEM 666
               A  VL++M
Sbjct: 277 AMDKAELVLRQM 288


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 233/540 (43%), Gaps = 55/540 (10%)

Query: 117 FDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           FD+  S  N  +    V + +FS+L+      G +++A +   +M    +    ++   L
Sbjct: 49  FDELWSTRNVCVPGFGVFDALFSVLI----DLGMLEEATQCFSKMKRFRVFPKTRSCNGL 104

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +H F K  + D   + F  M  +G       Y+++I  + K   +E A  L+ EMK  G+
Sbjct: 105 LHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGL 164

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD                                 T+  NS++      G +D      
Sbjct: 165 IPD---------------------------------TVTYNSMIDGYGKVGRLDDTVYFF 191

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M                   +  P+  +++ +IN   K GKL   L  +REM Q G  
Sbjct: 192 EEMKSM----------------SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLK 235

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV  Y+ L+D  C  + ++++ +   +M   G  P  FT  S+    C+  ++  A  L
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M   G E  V   T LI  LC   +  EA +    MV  G +P++  Y+A I G + 
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            K +D ALEL  ++   G  PD++ Y   I GLC  +++  A+ + NEM   G+  +   
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  L++ + KSGN  + +  L  M E +     V+T+  LIDGLC       AI  +  M
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDH-EVTVVTFCVLIDGLCKNKLVSKAIDYFGRM 474

Query: 597 EEK-GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
               G  PN   + A+I GLCK ++ +AA   F  M ++G+ PD   + +L+   L + N
Sbjct: 475 SNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGN 534



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 236/551 (42%), Gaps = 29/551 (5%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
            ++ C    G    L   L  +G++EEA   F ++KR  +  P   S N LL    K   
Sbjct: 55  TRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRV-FPKTRSCNGLLHKFAKLGK 113

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
            D V+   K+M   G     +T   ++      G  + A  +F E+   G + + V ++ 
Sbjct: 114 TDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNS 173

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++  + K G +D      E M   +   +  T+  LI+ F K  ++ K L+ + +M +SG
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFEILSKLITSC-----SDEG 254
              +   Y  ++   CK   ++ A++ Y +M+  G  P +F   S +  +C     SD  
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAF 293

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
            L   + E+  + +V T T L +     L     + +A  L   M+              
Sbjct: 294 RLANEMLEVGVEWNVVTYTALIDG----LCDAERMKEAEKLFGKMVTA------------ 337

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                V PN +S++ +I+  +K   +D AL L  E+   G   ++ LY   I GLC   +
Sbjct: 338 ----GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +E +  ++ EM+E+G K       ++     +  +    L+L+ +M+   HE  V    +
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453

Query: 435 LIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           LI  LCK+    +A  +   M  + G  P+   Y+A I GL    +V  A  LF  +   
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD  AY  ++ G  K   + EA  L ++M   G+   +  Y  L+ G+ +   + +A
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573

Query: 554 MLCLSRMLEKE 564
              L  M+ +E
Sbjct: 574 RSFLEEMIGEE 584



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 182/406 (44%), Gaps = 18/406 (4%)

Query: 262 EIWEDRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           E+W  R+V      + +++  +L+  G +++A      M +              F+  V
Sbjct: 51  ELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKR--------------FR--V 94

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P T S + +++   K GK D     F++M   G    VF YN +ID +     +E +  
Sbjct: 95  FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARG 154

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM+  G  P   T NSM     +   +   +    +M+    EP V     LI   C
Sbjct: 155 LFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFC 214

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K GK  +   F  +M Q G  P++V YS  +        +  A++ + D+   G  P+  
Sbjct: 215 KSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF 274

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  ++   CK   +++A  L NEM+  G+  +V TY  LI+G C +  + +A     +M
Sbjct: 275 TYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           +      P++ +Y  LI G   A   D A+ L NE++ +G  P+ + +   I GLC  ++
Sbjct: 335 V-TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             AA V    M+E G+K +  ++  L+ A+    NP     +L+EM
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 204/469 (43%), Gaps = 56/469 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I C+   G +E A  LF+++K  GL +P+  +YN +++   K   +D      +EM+  
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFRGL-IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSM 197

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG------------------------ 131
               D  T   L+  +C SG+  K L  + E+   G                        
Sbjct: 198 SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 132 ---WVD---------EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
              +VD         E  ++ L+ A  K G +  A  L   M +  +  N  T+  LI G
Sbjct: 258 IKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                R+ +A +LF KM  +G   + A Y+ +I G  K K ++ AL+L +E+KG GI PD
Sbjct: 318 LCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPD 377

Query: 240 FEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             +    I   C  E  E   +V    ++  +   TL+  ++M     +G+  +  +LL+
Sbjct: 378 LLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCM 356
            M       ++  E+ ++          +F ++I+ L K+  +  A+  F  M+   G  
Sbjct: 438 EM------QELDHEVTVV----------TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQ 481

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            N  +Y  +IDGLC  N+++ +  L  +M + G  P      S+     ++ +++ AL L
Sbjct: 482 PNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALAL 541

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             KM   G +  +   T L+    +  +  +A  FL +M+ E  LPD V
Sbjct: 542 RDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 217/429 (50%), Gaps = 19/429 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+++   LCK    ++A Q++  MK  G++P+  +L  L++S +++G+L      + +  
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V    ++ NS++  LV    ++ A  L    ++ +   D                T +F
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND----------------TKTF 209

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I  L   GK + AL L   M+  GC  ++  YN LI G C SN L ++ E+ ++++ 
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269

Query: 388 SGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                P   T  SM    C+   +  A +L+  M   G  P      +L+    K G+ +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      M+  G  PD+V +++ I G   + +V     L+ ++ A G  P+   Y+I+I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + LC   R+ +A +L  ++ +K +IP    YN +I+G+CK+G +++A + +  M EK+  
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM-EKKKC 448

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD IT+T LI G C+ GR  +A+ ++++M   GC+P++IT  +L++ L K    + A  
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY- 507

Query: 627 HFRMMKEKG 635
           H   +  KG
Sbjct: 508 HLNQIARKG 516



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 163/337 (48%), Gaps = 6/337 (1%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           FK  +  +  +++++  +L K G  DLA  +F  M   G   N  L   L+       +L
Sbjct: 95  FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHEPWVKHNTL 434
             +  LL +  E   +     +NS+   L +   V  A+ L    +R Q        N +
Sbjct: 155 HFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN-I 211

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI+ LC  GKA +A   L  M   G  PDIV Y+  I G      ++ A E+F+D+ +  
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271

Query: 495 -CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C PDVV Y  +ISG CKA ++ EA  L ++M+  G+ P+  T+N+L++G+ K+G +  A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                +M+      PDV+T+T+LIDG C  G+      LW EM  +G  PN  T+  LI 
Sbjct: 332 EEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            LC  +R   A      +  K + P  F++  +I  F
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 202/468 (43%), Gaps = 60/468 (12%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YN L  +LCK+   DL     + M+  G   +   L  L+  +   G+   A ++  +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163

Query: 127 IID-HGWVDEHVFSILLVAFSKWGEVDKACELIE---RMDDCNIRLNEKTFCVLIHGFVK 182
             +  G     V + LL    K   V+ A +L +   R   CN   + KTF +LI G   
Sbjct: 164 SFEVEGCC--MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN---DTKTFNILIRGLCG 218

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFE 241
             + +KAL+L   M+  G   D   Y+ +I G CK+ +L  A +++ ++K GS  +PD  
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + +I+                           C +        G + +A +LL  M++
Sbjct: 279 TYTSMISG-------------------------YCKA--------GKMREASSLLDDMLR 305

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                      L I+     P   +F+++++   K G++  A  +  +M   GC  +V  
Sbjct: 306 -----------LGIY-----PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           + +LIDG C   ++ + + L  EM   G  P  FT + +   LC    ++ A  L+ ++ 
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P       +I   CK GK  EA   + +M ++   PD + ++  I G     R+ 
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            A+ +F  + A GC PD +  + ++S L KA    EA  L N++  KG
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 25/352 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +  VE+A  LFD+  R   C  +  ++N L+  LC     +     L  M  +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSILLVAFSKWGEVD 152
           G   D  T   L+Q +C S + +KA  +F ++   G V   D   ++ ++  + K G++ 
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMR 294

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L++ M    I     TF VL+ G+ K   +  A ++  KM   G   D   +  +I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WEDRDV 269
            G C+  Q+    +L+ EM   G+ P+    S LI +  +E  L L  +E+      +D+
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL-LKARELLGQLASKDI 413

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                + N ++      G +++A  +++ M K +                  P+  +F I
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK----------------CKPDKITFTI 457

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           +I      G++  A+S+F +M  IGC  +    ++L+  L  +   +E+Y L
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 217/429 (50%), Gaps = 19/429 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+++   LCK    ++A Q++  MK  G++P+  +L  L++S +++G+L      + +  
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +V    ++ NS++  LV    ++ A  L    ++ +   D                T +F
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND----------------TKTF 209

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I  L   GK + AL L   M+  GC  ++  YN LI G C SN L ++ E+ ++++ 
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269

Query: 388 SGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                P   T  SM    C+   +  A +L+  M   G  P      +L+    K G+ +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      M+  G  PD+V +++ I G   + +V     L+ ++ A G  P+   Y+I+I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + LC   R+ +A +L  ++ +K +IP    YN +I+G+CK+G +++A + +  M EK+  
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM-EKKKC 448

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD IT+T LI G C+ GR  +A+ ++++M   GC+P++IT  +L++ L K    + A  
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY- 507

Query: 627 HFRMMKEKG 635
           H   +  KG
Sbjct: 508 HLNQIARKG 516



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 163/337 (48%), Gaps = 6/337 (1%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           FK  +  +  +++++  +L K G  DLA  +F  M   G   N  L   L+       +L
Sbjct: 95  FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHEPWVKHNTL 434
             +  LL +  E   +     +NS+   L +   V  A+ L    +R Q        N +
Sbjct: 155 HFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN-I 211

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI+ LC  GKA +A   L  M   G  PDIV Y+  I G      ++ A E+F+D+ +  
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271

Query: 495 -CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C PDVV Y  +ISG CKA ++ EA  L ++M+  G+ P+  T+N+L++G+ K+G +  A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                +M+      PDV+T+T+LIDG C  G+      LW EM  +G  PN  T+  LI 
Sbjct: 332 EEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            LC  +R   A      +  K + P  F++  +I  F
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 202/468 (43%), Gaps = 60/468 (12%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           ++YN L  +LCK+   DL     + M+  G   +   L  L+  +   G+   A ++  +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163

Query: 127 IID-HGWVDEHVFSILLVAFSKWGEVDKACELIE---RMDDCNIRLNEKTFCVLIHGFVK 182
             +  G     V + LL    K   V+ A +L +   R   CN   + KTF +LI G   
Sbjct: 164 SFEVEGCC--MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN---DTKTFNILIRGLCG 218

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFE 241
             + +KAL+L   M+  G   D   Y+ +I G CK+ +L  A +++ ++K GS  +PD  
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + +I+                           C +        G + +A +LL  M++
Sbjct: 279 TYTSMISG-------------------------YCKA--------GKMREASSLLDDMLR 305

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                      L I+     P   +F+++++   K G++  A  +  +M   GC  +V  
Sbjct: 306 -----------LGIY-----PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           + +LIDG C   ++ + + L  EM   G  P  FT + +   LC    ++ A  L+ ++ 
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P       +I   CK GK  EA   + +M ++   PD + ++  I G     R+ 
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            A+ +F  + A GC PD +  + ++S L KA    EA  L N++  KG
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 25/352 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +  VE+A  LFD+  R   C  +  ++N L+  LC     +     L  M  +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSILLVAFSKWGEVD 152
           G   D  T   L+Q +C S + +KA  +F ++   G V   D   ++ ++  + K G++ 
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMR 294

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L++ M    I     TF VL+ G+ K   +  A ++  KM   G   D   +  +I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WEDRDV 269
            G C+  Q+    +L+ EM   G+ P+    S LI +  +E  L L  +E+      +D+
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL-LKARELLGQLASKDI 413

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                + N ++      G +++A  +++ M K +                  P+  +F I
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK----------------CKPDKITFTI 457

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           +I      G++  A+S+F +M  IGC  +    ++L+  L  +   +E+Y L
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 234/507 (46%), Gaps = 66/507 (13%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +F +LI  F   S++  AL  F K+TK GF      ++ ++ GLC   ++  AL L+ +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                             C                 +V T T L N + R     G + +
Sbjct: 77  ------------------CKP---------------NVVTFTTLMNGLCR----EGRVVE 99

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M++                  + PN  ++  I++ + K G    AL+L R+M 
Sbjct: 100 AVALLDRMVED----------------GLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 352 QIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           ++  ++ +V +Y+ +IDGL    R  ++  L  EM++ G  P   T + M    C     
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  L+++M V+   P V   + LI  L K G    A   L +M+  G  P++V  +  
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 471 IGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIISGLCKAQRVAEAE 519
           + GL D  ++  ALE+F+       DI A    +G  PDV  YNI+ISGL    +  EAE
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L+ EM  +G++P   TY+ +ING CK   +D+A      M  K S SP+++T+ TLI G
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPNIVTFNTLITG 382

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C AG  DD + L+ EM  +G   N IT++ LI G  K      +L  F+ M   G+ PD
Sbjct: 383 YCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
                 +++   S+     A  +L+E+
Sbjct: 443 TITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 238/505 (47%), Gaps = 55/505 (10%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D Y+   L++ +C+  +   ALS F ++   G+    V F+ LL        V +A +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            +M     + N  TF  L++G  ++ RV +A+ L D+M + G   +   Y  I+ G+CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 219 KQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMT 273
                AL L  +M+  S I PD  I S +I     +G  T    L ++   +D+ +    
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE--MQDKGIFPDI 187

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  + ++    S+G   +A  LLQ M+  +                +SP+  +F  +IN 
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRK----------------ISPDVVTFSGLINA 231

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L+K+G L+ A  L +EM   G   NV   N L+DGLC+S +L+++ E+ + M++S     
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI- 290

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
                          D   A N        G EP V+   +LI  L   GK +EA     
Sbjct: 291 ---------------DATHAFN--------GVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M   G +PD V YS+ I GL    R+D A ++F  + +    P++V +N +I+G CKA 
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVIT 572
            V +  +LF EM  +G++ +  TY  LI G+ K GNI+ ++     M+   SG  PD IT
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI--SSGVYPDTIT 445

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEME 597
              ++ GL        A+ +  E++
Sbjct: 446 IRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/482 (21%), Positives = 194/482 (40%), Gaps = 80/482 (16%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA  LF Q     +C PN  ++  L+  LC+   V      L  M + G   ++ T  
Sbjct: 66  VSEALDLFHQ-----MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 106 PLLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
            ++   C  G    AL++  ++  + H   D  ++S ++    K G    A  L   M D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  +  T+  +I+GF    +  +A +L  +M     + D   +  +I  L K   L  
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A  L  EM  SG+ P+                                  + CN+++  L
Sbjct: 241 AQDLLQEMISSGVCPN---------------------------------VVTCNTLLDGL 267

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             +G +  A  + +AM K    + + ++    F G V P+  +++I+I+ L+ +GK   A
Sbjct: 268 CDSGKLKDALEMFKAMQK----SMMDIDATHAFNG-VEPDVQTYNILISGLINEGKFLEA 322

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L+ EM   G + +   Y+++I+GLC  +RL+E+ ++   M    F P   T N+    
Sbjct: 323 EELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT---- 378

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                                          LI   CK G   +      +M + G + +
Sbjct: 379 -------------------------------LITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            + Y   I G   +  ++ +L++F+++ + G  PD +    +++GL   + + +A  +  
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLE 467

Query: 524 EM 525
           E+
Sbjct: 468 EL 469


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 247/524 (47%), Gaps = 41/524 (7%)

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N+ LNE ++  +I    K  +VD   ++  ++ ++G       Y+V++  LCK+ ++E A
Sbjct: 6   NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 65

Query: 225 LQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            +L   M+  G+TP    F IL   +      GE+ ++++E+ E   V+   ++ N ++ 
Sbjct: 66  FRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEM-EQLGVSPNEVIYNELIG 124

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G   QA  L   M+  +                + P   ++++I   L K+G+++
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKK----------------MKPTAVTYNLIAKALCKEGEME 168

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCN-SNRLEESYELLREMEESGFKPTHFTLNSM 400
            A  +  +M  IG   +  L+N ++  L   + RLE    +  EM   G +P    + + 
Sbjct: 169 RAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTAC 228

Query: 401 FRCLC---RRQDVVG--------------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            R LC   + Q+ VG              A  +++ M  +G E       ++I+  CK  
Sbjct: 229 MRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDS 288

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA +   DM + GF PD+  ++  +    ++ +++    L   +   G  PD+V+Y 
Sbjct: 289 KMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYG 348

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            II G CKA+ + +A++   E++ +GL P+V  YN LI G+ ++G+I  A+  +  M  K
Sbjct: 349 TIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETM--K 406

Query: 564 ESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            +G  P  +TY +L+  +C AG  ++A  ++++  E       I +  +I G CK  +  
Sbjct: 407 SNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMV 466

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+ +F  M+ +G+ P+   +  L+ A+    N   A ++  EM
Sbjct: 467 EAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEM 510



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 12/521 (2%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YSY  +++ALCK+  VD     L E+   G      T   L+   C SG+ ++A  + 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +   G     V F IL+   ++     +   +++ M+   +  NE  +  LI    +K
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
               +AL+LFD+M        A  Y++I   LCK  ++E A ++  +M   G+T     F
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAM 299
             +   +   +   E  + +      R +     L  + MR L   G   +A  +  + +
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            KG+ + +    +  +    +  ++ +++I+I    KD K++ A+ L  +MT+ G   ++
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F +N L+   CN  ++EE++ LL +M+  G +P   +  ++    C+ +D+  A   + +
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +  +G +P V     LI    ++G    A   +  M   G  P  V Y + +  +     
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGL 429

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V+ A  +F     +     V+ Y I+I G CK  ++ EA   F EM ++G+ P+  TY  
Sbjct: 430 VEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTT 489

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGS---PDVITYTTLI 577
           L+  + KSGN ++A    S++ ++  GS   PD ITY TLI
Sbjct: 490 LMYAYSKSGNSEEA----SKLFDEMVGSGVIPDNITYGTLI 526



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 240/522 (45%), Gaps = 46/522 (8%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           ++E+ ++ ++ A  K G+VD   E++  +    ++    T+ VL+    K  RV++A +L
Sbjct: 9   LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 68

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
             +M + G       + ++I GL + ++      +  EM+  G++P+  I ++LI     
Sbjct: 69  KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR 128

Query: 253 EGELTLLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI---------- 300
           +G  +  ++   E   + +    +  N I + L   G +++A  +L+ M+          
Sbjct: 129 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 188

Query: 301 -------------KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                        + E +  +  E  M+ +G + PN       +  L K GK   A+ ++
Sbjct: 189 FNTVVAWLLQRTRRLESVVSITNE--MVTRG-MRPNDPLMTACMRELCKGGKHQEAVGIW 245

Query: 348 ----------REMTQI-------GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
                     +E T++       G   +   YN +I G C  +++EE+ +L  +M   GF
Sbjct: 246 FKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGF 305

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           KP  FT N++    C    +    +L+ +M+ +G +P +     +I   CK     +A  
Sbjct: 306 KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 365

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           +LT+++  G  P++  Y+A IGG      +  A++    + ++G  P  V Y  ++  +C
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
            A  V EA+ +F++     +   V  Y ++I G+CK G + +A+     M  +   SP+ 
Sbjct: 426 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSR-GISPNK 484

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           +TYTTL+     +G  ++A  L++EM   G  P+ IT+  LI
Sbjct: 485 LTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/506 (21%), Positives = 219/506 (43%), Gaps = 40/506 (7%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R  + P  + +  L+  L   G VEEA  L  ++++ G+  P+  ++  L+  L +    
Sbjct: 39  RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM-TPSVVTFGILINGLARGERF 97

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
             V + L+EM+  G   ++     L+  +C  G   +AL +F+E++        V ++++
Sbjct: 98  GEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLI 157

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR-VDKALQLFDKMTKSG 200
             A  K GE+++A  ++E M    + ++   F  ++   ++++R ++  + + ++M   G
Sbjct: 158 AKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRG 217

Query: 201 FASD-----AAMYDVIIGG------------LCKNKQLEMALQLYSEMKGSGITPDFEIL 243
              +     A M ++  GG            L K K ++ A ++   M   GI  D    
Sbjct: 218 MRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITY 277

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + +I  C  + ++   +K   +   R         N+++    + G +++ ++LL  M K
Sbjct: 278 NIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM-K 336

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E +                P+  S+  II+   K   +  A     E+   G   NVF+
Sbjct: 337 TEGL---------------QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFI 381

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI G   +  +  + + +  M+ +G +PT+ T  S+   +C    V  A  +  + R
Sbjct: 382 YNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAR 441

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               +  V   T++I+  CK GK +EA  +  +M   G  P+ + Y+  +         +
Sbjct: 442 ENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSE 501

Query: 482 LALELFRDICAHGCCPDVVAYNIIIS 507
            A +LF ++   G  PD + Y  +I+
Sbjct: 502 EASKLFDEMVGSGVIPDNITYGTLIA 527



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 2/223 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+    ++G +EE   L DQ+K EGL  P+  SY  +++  CK+  +   +  L E+ D 
Sbjct: 315 LLHAYCNLGKMEETFHLLDQMKTEGL-QPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDR 373

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + +    L+  Y  +G    A+     +  +G    +V +  L+      G V++A
Sbjct: 374 GLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEA 433

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +  +  + N+ L    + ++I G+ K  ++ +A+  F++M   G + +   Y  ++  
Sbjct: 434 KTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYA 493

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             K+   E A +L+ EM GSG+ PD      LI  CS++G  T
Sbjct: 494 YSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKT 536



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%)

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M E  + + +  +YT +I  LC AG+ D    +  E+   G  P  +T+  L+  LCK  
Sbjct: 1   MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           R   A      M++ GM P +  F  LI+  
Sbjct: 61  RVEEAFRLKGRMEQGGMTPSVVTFGILINGL 91


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 234/507 (46%), Gaps = 66/507 (13%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +F +LI  F   S++  AL  F K+TK GF      ++ ++ GLC   ++  AL L+ +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                             C                 +V T T L N + R     G + +
Sbjct: 77  ------------------CKP---------------NVVTFTTLMNGLCR----EGRVVE 99

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M++                  + PN  ++  I++ + K G    AL+L R+M 
Sbjct: 100 AVALLDRMVED----------------GLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 352 QIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           ++  ++ +V +Y+ +IDGL    R  ++  L  EM++ G  P   T + M    C     
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  L+++M V+   P V   + LI  L K G    A   L +M+  G  P++V  +  
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 471 IGGLIDIKRVDLALELFR-------DICA----HGCCPDVVAYNIIISGLCKAQRVAEAE 519
           + GL D  ++  ALE+F+       DI A    +G  PDV  YNI+ISGL    +  EAE
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L+ EM  +G++P   TY+ +ING CK   +D+A      M  K S SP+++T+ TLI G
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK-SFSPNIVTFNTLITG 382

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C AG  DD + L+ EM  +G   N IT++ LI G  K      +L  F+ M   G+ PD
Sbjct: 383 YCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
                 +++   S+     A  +L+E+
Sbjct: 443 TITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 232/488 (47%), Gaps = 55/488 (11%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D Y+   L++ +C+  +   ALS F ++   G+    V F+ LL        V +A +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            +M     + N  TF  L++G  ++ RV +A+ L D+M + G   +   Y  I+ G+CK 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 219 KQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMT 273
                AL L  +M+  S I PD  I S +I     +G  T    L ++   +D+ +    
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE--MQDKGIFPDI 187

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  + ++    S+G   +A  LLQ M+  +                +SP+  +F  +IN 
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRK----------------ISPDVVTFSGLINA 231

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L+K+G L+ A  L +EM   G   NV   N L+DGLC+S +L+++ E+ + M++S     
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI- 290

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
                          D   A N        G EP V+   +LI  L   GK +EA     
Sbjct: 291 ---------------DATHAFN--------GVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M   G +PD V YS+ I GL    R+D A ++F  + +    P++V +N +I+G CKA 
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVIT 572
            V +  +LF EM  +G++ +  TY  LI G+ K GNI+ ++     M+   SG  PD IT
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMI--SSGVYPDTIT 445

Query: 573 YTTLIDGL 580
              ++ GL
Sbjct: 446 IRNMLTGL 453



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/482 (21%), Positives = 193/482 (40%), Gaps = 80/482 (16%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA  LF Q     +C PN  ++  L+  LC+   V      L  M + G   ++ T  
Sbjct: 66  VSEALDLFHQ-----MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 106 PLLQVYCNSGQFDKALSVFNEI--IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
            ++   C  G    AL++  ++  + H   D  ++S ++    K G    A  L   M D
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             I  +  T+  +I+GF    +  +A +L  +M     + D   +  +I  L K   L  
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A  L  EM  SG+ P+                                  + CN+++  L
Sbjct: 241 AQDLLQEMISSGVCPN---------------------------------VVTCNTLLDGL 267

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             +G +  A  + +AM K    + + ++    F G V P+  +++I+I+ L+ +GK   A
Sbjct: 268 CDSGKLKDALEMFKAMQK----SMMDIDATHAFNG-VEPDVQTYNILISGLINEGKFLEA 322

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L+ EM   G + +   Y+++I+GLC  +RL+E+ ++   M    F P   T N+    
Sbjct: 323 EELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT---- 378

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                                          LI   CK G   +      +M + G + +
Sbjct: 379 -------------------------------LITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            + Y   I G   +  ++ +L++F+++ + G  PD +    +++GL   + +  A  +  
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLE 467

Query: 524 EM 525
           E+
Sbjct: 468 EL 469


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 227/491 (46%), Gaps = 32/491 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL-YSE 230
           T+ ++I    +   +D A     ++ ++G+ + A  +  ++ GLC +K+   A+ +    
Sbjct: 98  TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRR 157

Query: 231 MKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDR------DVNTMTLLCNSIM 280
           M   G TP+    + L+    DE      L LL   + +D       DV + T + N ++
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R     G +D+AY L   M+      D G+          SPN  +++ +++     GK 
Sbjct: 218 R----EGQLDKAYCLFDEML------DQGM----------SPNCITYNCLLHGYCSSGKP 257

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A+ +FR+M + G   +V  YN L+  LC + R  E+ ++   M + G KP      ++
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                    +V    L+  M   G +P      +LI    KHG   EA    + M Q+G 
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P+IV Y   +  L  + +VD A+  F  + + G  P+ V +  +I GLC   +  +AE+
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L  EMI +G+ P+   +N L+N  CK G + +A      M+  +    DVITYTTLIDG 
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDV-QCDVITYTTLIDGY 496

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C+ G+ D+A  L   M   G  PN +T+  +I G CK  R   A   FR M  KG+ P +
Sbjct: 497 CLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGI 556

Query: 641 FVFVALISAFL 651
            ++  ++    
Sbjct: 557 VIYSTILHGLF 567



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 272/597 (45%), Gaps = 44/597 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQD 94
           +I C    G ++ A     +V R G       +++ LL+ LC    + D +++ L+ M  
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGW-TAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA 160

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII---DHGWVDEHVFSILLV--AFSKWG 149
            G   + ++   LL+  C+  +  +AL + + ++     G     V S   V     + G
Sbjct: 161 LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREG 220

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++DKA  L + M D  +  N  T+  L+HG+    +  +A+ +F KM + G   D   Y+
Sbjct: 221 QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYN 280

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            ++  LCKN +   A +++  M   G  PD  I   L+   + EG L  +          
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQM---------- 330

Query: 270 NTMTLLCNSIMRILVSNGSIDQAY--NLLQAMIKGEPIADVGVEMLMIF----KGTVSPN 323
                  + ++ ++V NG+    Y  N+L        + D   E ++ F    +  + PN
Sbjct: 331 -------HQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVD---EAMLAFSKMRQQGLHPN 380

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +++ L + GK+D A+S F  +   G   N  ++  LI GLC  ++ +++ EL  
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G  P     N++   LC+   V  A N+   M     +  V   T LI   C  G
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA + L  MV +G  P+ V Y+  I G     R++ A  LFR + + G  P +V Y+
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYS 560

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-----LCLS 558
            I+ GL + +R+A A++L+  MI  G+   + TYN+++ G C++   D A+     LCL 
Sbjct: 561 TILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLI 620

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               +        T+  +ID L   GR D+A  L+  +  +G  PN +T+  ++  L
Sbjct: 621 DFHLQNR------TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 671



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/560 (23%), Positives = 252/560 (45%), Gaps = 27/560 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +++A  LFD++  +G+  PN  +YNCLL   C S          ++M   G   D  T
Sbjct: 220 GQLDKAYCLFDEMLDQGMS-PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVT 278

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+   C +G+  +A  VF+ ++  G   D  ++  LL  ++  G + +  +L++ M 
Sbjct: 279 YNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMV 338

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               + +   F +LI  + K   VD+A+  F KM + G   +   Y  ++  LC+  +++
Sbjct: 339 RNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398

Query: 223 MALQLYSEMKGSGITPDFEILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            A+  +  +   G+TP+  +   LI    +C    +   L  E+   R +   T+  N++
Sbjct: 399 DAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMI-GRGICPNTIFFNTL 457

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L   G + +A N+   M++     DV  +++            ++  +I+    DGK
Sbjct: 458 LNHLCKEGMVTRAKNIFDLMVR----VDVQCDVI------------TYTTLIDGYCLDGK 501

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A  L   M   G   N   YN +I+G C + R+E++  L R+M   G  P     ++
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L + + +  A  L   M   G +  +    ++++ LC++    +A R   ++    
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID 621

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F      ++  I  L+   R D A +LF  + A G  P+VV Y +++  L +   + E +
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 681

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DLF  +   G        N L+    + G + +A + LS+ +++ + S +  T  +L+  
Sbjct: 682 DLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSK-IDENNFSLEASTAESLV-F 739

Query: 580 LCIAGRPDDAIMLWNEMEEK 599
           L  +G+ D  I   N + EK
Sbjct: 740 LVSSGKYDQHI---NSIPEK 756



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 15/266 (5%)

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC--KHGKAMEAFRFL 452
           F LNS    + R    V AL+L  +M      P     T  I   C  + G    AF  L
Sbjct: 67  FDLNSALSAVARESPAV-ALSLFNRM------PRADLCTYSIVIGCCSRAGHLDLAFAAL 119

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL-FRDICAHGCCPDVVAYNIIISGLCK 511
             +++ G+    + +S  + GL   KR   A+++  R + A GC P+  +YNI++ GLC 
Sbjct: 120 GRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCD 179

Query: 512 AQRVAEAEDLFNEMITK----GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
             R  +A  L + M+      G  P V +Y  +ING  + G +D+A      ML+ +  S
Sbjct: 180 ENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLD-QGMS 238

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+ ITY  L+ G C +G+P +AI ++ +M   G  P+ +T+  L+  LCK  R   A   
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
           F  M +KG KPD  ++  L+  + +E
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATE 324



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 26/373 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G ++  L  VG V++A   FD++  EGL  PN   +  L+  LC     D  E    EM 
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGL-TPNGVVFRTLIHGLCACDKWDKAEELAVEMI 443

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVD 152
             G   +      LL   C  G   +A ++F+ ++      D   ++ L+  +   G+VD
Sbjct: 444 GRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L+E M    ++ NE T+  +I+G+ K  R++ A  LF +M   G      +Y  I+
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDR 267
            GL + +++  A +LY  M   GI       + ++      +C+D+  L +       D 
Sbjct: 564 HGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA-LRMFHNLCLIDF 622

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            +   T   N ++  L+  G  D+A +L  +++                +G V PN  ++
Sbjct: 623 HLQNRTF--NIMIDALLKGGRHDEAKDLFASLLA---------------RGLV-PNVVTY 664

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            +++ +L++ G L+    LF  + + GC  +  + N L+  L     + ++   L +++E
Sbjct: 665 WLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDE 724

Query: 388 SGFKPTHFTLNSM 400
           + F     T  S+
Sbjct: 725 NNFSLEASTAESL 737


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 214/438 (48%), Gaps = 30/438 (6%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           FV   R     + +       +A +   Y +++ G CK  + + AL+L  EMK +G+ P+
Sbjct: 5   FVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 240 FEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
             I + +I      G+++   L  + I ED   N  T   ++++  L  +G   +AY L+
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTY--STLVDALCKSGQPHEAYGLV 122

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M+K               KG  SPN  +++ +I+   K  +LD  L L +EM+Q GC 
Sbjct: 123 TEMVK---------------KG-CSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCR 166

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD--VVGAL 414
            +V  Y  ++D  C +N ++E+Y LL  +E    K    T NS+F  L   +      AL
Sbjct: 167 ADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEAL 222

Query: 415 NLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           +L+ KM  +G  P  V + T+L+  LCK+ +  EA++ L  M  +G   D V Y   +  
Sbjct: 223 SLLEKMIQEGTRPNQVNYRTVLLM-LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVA 281

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
             +  R   +LEL   +   G   D    N++I   CKA  + EA  LF  M  +G IPS
Sbjct: 282 FANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPS 341

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TYN LI  +CK+   D A+  L +M++ +   P+VITY ++I   C   R ++A  ++
Sbjct: 342 NVTYNTLIGAFCKAQQPDTAVKLLHQMIQADF-KPNVITYNSIIKSFCREQREEEARGIF 400

Query: 594 NEMEEKGCAPNRITFMAL 611
             M + GC P+R+++  L
Sbjct: 401 QMMVDNGCFPDRVSYTTL 418



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 160/342 (46%), Gaps = 20/342 (5%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN      II  L   GK+  AL  FR + +  C  NV+ Y+ L+D LC S +  E+Y
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-DCAPNVYTYSTLVDALCKSGQPHEAY 119

Query: 380 ELLREMEESGFKPTHFTLNSM---FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            L+ EM + G  P   T N++   FR L R  +V   L L+++M  +G    V   T+++
Sbjct: 120 GLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEV---LMLLKEMSQRGCRADVITYTMIL 176

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK--RVDLALELFRDICAHG 494
              CK+    EA+R L  + +     ++V Y++    L   +  R   AL L   +   G
Sbjct: 177 DIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEG 232

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+ V Y  ++  LCK  R+ EA  +   M ++G      +Y +L+  +  +G    ++
Sbjct: 233 TRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSL 292

Query: 555 LCLSRMLEKESGSP---DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             L RML    GS    D  T   +I   C AG   +A  L+  M ++G  P+ +T+  L
Sbjct: 293 ELLGRML----GSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTL 348

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           I   CK  +P  A+     M +   KP++  + ++I +F  E
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCRE 390



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 150/344 (43%), Gaps = 39/344 (11%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   Y  L+ G C +   +++ ELL EM+ +G +P      ++ R LC    V  AL   
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 418 RKMRVQGHE--PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           R++   G +  P V   + L+  LCK G+  EA+  +T+MV++G  P++V Y+A I G  
Sbjct: 89  RRI---GEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK------------------------ 511
            ++R+D  L L +++   GC  DV+ Y +I+   CK                        
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNS 205

Query: 512 ---------AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                      R  EA  L  +MI +G  P+   Y  ++   CK+  +D+A   L  M  
Sbjct: 206 LFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS 265

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +   + DV +Y  L+     AGR  D++ L   M   G   +  T   +I   CK     
Sbjct: 266 QGCKTDDV-SYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLH 324

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A   F+ M ++G  P    +  LI AF     P  A ++L +M
Sbjct: 325 EAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 180/413 (43%), Gaps = 22/413 (5%)

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           G    N  SY  L++  CK+         L EM+  G   +    T +++  C +G+  +
Sbjct: 24  GSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQ 83

Query: 120 ALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           AL  F  I +    + + +S L+ A  K G+  +A  L+  M       N  T+  LI G
Sbjct: 84  ALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDG 143

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K  R+D+ L L  +M++ G  +D   Y +I+   CKN  ++ A +L + ++   +   
Sbjct: 144 FRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTY 203

Query: 240 FEILSKLITSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + + L T+  D     L+LL K I E    N +     +++ +L  N  +D+AY +L 
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNY--RTVLLMLCKNSRLDEAYQVLL 261

Query: 298 AMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +M  +G    DV                 S+ I++      G+   +L L   M   G +
Sbjct: 262 SMYSQGCKTDDV-----------------SYKILVVAFANAGRTYDSLELLGRMLGSGYI 304

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +    N +I   C +  L E+++L + M + G  P++ T N++    C+ Q    A+ L
Sbjct: 305 LDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKL 364

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           + +M     +P V     +IK  C+  +  EA      MV  G  PD V Y+ 
Sbjct: 365 LHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTT 417



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 2/193 (1%)

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +D KR     E +R         + V+Y I++ G CKA    +A +L +EM + G+ P+
Sbjct: 5   FVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  +  +I G C +G + QA+L   R+   E  +P+V TY+TL+D LC +G+P +A  L 
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRI--GEDCAPNVYTYSTLVDALCKSGQPHEAYGLV 122

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM +KGC+PN +T+ ALI G  K +R    L+  + M ++G + D+  +  ++  F   
Sbjct: 123 TEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKN 182

Query: 654 LNPPLAFEVLKEM 666
            +   A+ +L  +
Sbjct: 183 NSIDEAYRLLNAL 195



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 165/370 (44%), Gaps = 27/370 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR L + G V +A + F ++  +  C PN Y+Y+ L++ALCKS         + EM   
Sbjct: 71  IIRGLCTAGKVSQALLHFRRIGED--CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKK 128

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+  +    + D+ L +  E+   G   D   ++++L  F K   +D+A
Sbjct: 129 GCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA 188

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  ++  N+      F  L     +  R  +AL L +KM + G   +   Y  ++  
Sbjct: 189 YRLLNALEKRNVVTYNSLFTAL--STAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLM 246

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVN 270
           LCKN +L+ A Q+   M   G   D      L+ + ++ G     L LL + +     ++
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILD 306

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T T+  N ++      G + +A+ L ++M +               +G++ P+  +++ +
Sbjct: 307 TKTM--NVVIHKFCKAGDLHEAHQLFKSMYQ---------------RGSI-PSNVTYNTL 348

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K  + D A+ L  +M Q     NV  YN++I   C   R EE+  + + M ++G 
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGC 408

Query: 391 KPTHFTLNSM 400
            P   +  ++
Sbjct: 409 FPDRVSYTTL 418


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 223/503 (44%), Gaps = 49/503 (9%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  SY  L+ ALC     D     L+ M+  G   D  T   L++  C++ + DKA+
Sbjct: 111 CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV 170

Query: 122 SVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +  E+ + G   +  V+S LL  + K G  +   ++   M +  I  +   +  LI   
Sbjct: 171 ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  +  KA  + D M + G   +   Y+V+I  +CK   ++ A+ +  +M   G+ PD 
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + LI   SD  E+                                 D+A  LL+ M+
Sbjct: 291 VTYNTLIKGLSDVLEM---------------------------------DEAMWLLEEMV 317

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +G              K  V PN  +F+ +I  L   G++  A  +   M + GCM N+ 
Sbjct: 318 RG--------------KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI GL   +++ ++ EL+ EM   G +P  FT + + +  C+   V  A +L+  M
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G EP + H   L+  +C+ G  ME  R L + +   F  D+V YS  I G      +
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQG-MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDL 482

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A EL + I   G  PD V Y+I+I+   K+  +  A  +  +M   G +P VA ++ L
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 541 INGWCKSGNIDQAMLCLSRMLEK 563
           I G+   G I++ +  +  M+ K
Sbjct: 543 IQGYSTKGEINKVLELIREMITK 565



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 239/502 (47%), Gaps = 25/502 (4%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS---DAAMYDVIIGGLCKNKQLEMALQLY 228
           ++  ++    ++   D+A  L   M+     +   +A  Y V++  LC ++  + A+ L 
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M+ +G+  D      LI    D  E+         D+ V  M  +C S +   V   S
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEV---------DKAVELMGEMCESGIEPNVVVYS 189

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                +LLQ   K     DVG   + + +  + P+   +  +I++L K GK   A  +  
Sbjct: 190 -----SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M + G   NV  YN LI+ +C    ++E+  +L++M E G  P   T N++ + L    
Sbjct: 245 MMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 409 DVVGALNLVRKMRVQGH---EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  A+ L+ +M V+G    +P V     +I+ LC  G+  +AF+    M + G + ++V
Sbjct: 305 EMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  IGGL+ + +V  A+EL  ++ + G  PD   Y+I+I G CK  +V  AEDL + M
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM 423

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAG 584
             +G+ P +  Y  L+   C+ G +++A    + M   ++  P DV+ Y+T+I G C AG
Sbjct: 424 RDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM---DNNFPLDVVAYSTMIHGACKAG 480

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
               A  L   + ++G  P+ +T+  +I    K     AA    + M   G  PD+ VF 
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFD 540

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           +LI  + ++       E+++EM
Sbjct: 541 SLIQGYSTKGEINKVLELIREM 562



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 6/256 (2%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           + R R+   +R + ++   + C ++      LI  L  V  V +A  L D++   GL  P
Sbjct: 340 IGRMRQAFQVRAMMEE---TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL-EP 395

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           ++++Y+ L++  CK   VD  E  L  M+D G   + +   PLL   C  G  ++A ++F
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF 455

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           NE+ ++  +D   +S ++    K G++  A EL++ + D  +  +  T+ ++I+ F K  
Sbjct: 456 NEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++ A  +  +MT SGF  D A++D +I G     ++   L+L  EM    I  D +I+S
Sbjct: 516 DMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIS 575

Query: 245 KLITS--CSDEGELTL 258
            L TS   S+EG+  L
Sbjct: 576 TLSTSLVASNEGKALL 591



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEME---EKGCAPNRITFMALITGLCKCDRPRAAL 625
           D ++Y T++  LC  G  D A  L   M       C PN +++  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R M+  G++ D+  +  LI           A E++ EM
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 281/597 (47%), Gaps = 56/597 (9%)

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
            L +P   S + L E+   +         L  M   G+G + Y L  +L+ +C SGQ DK
Sbjct: 71  ALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDK 130

Query: 120 ALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           A+S+F++                               ++R  DC +  +  T+  L++G
Sbjct: 131 AMSLFSQ-------------------------------MKRNYDCVVP-DCVTYNTLVNG 158

Query: 180 FVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           F K  R+ +A  LF+ M K G    +   Y V+I   CK+ ++   L L  EM+  G+  
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D  + S LI++   EG++    +E++++   R V+   +  + +M+ L   G   +A  +
Sbjct: 219 DVFVYSSLISAFCGEGDIE-TGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ M                 +G V P+  ++ ++ + L K+G+   A+ +   M Q G 
Sbjct: 278 LKDMTA---------------RG-VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE 321

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
                 YN +++GLC  +R+++++ ++  M + G KP   T N++ + LC    +  A++
Sbjct: 322 EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD 381

Query: 416 LVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L + +  +    +P V     LI+ LCK G+  +A R  + MV+ G   +IV Y+  I G
Sbjct: 382 LWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEG 441

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +  +++  AL+L++     G  P+ + Y+++I+GLCK Q ++ A  LF +M   G+ P+
Sbjct: 442 YLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPT 501

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  YN L+   C+  +++QA      M    + + DV+++  +IDG   AG    A  L 
Sbjct: 502 VIDYNALMTSLCREDSLEQARSLFQEM-RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +EM      P+ +TF  LI    K      A+  +  M   G  P + VF +L+  +
Sbjct: 561 SEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGY 617



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 242/554 (43%), Gaps = 56/554 (10%)

Query: 120 ALSVFNEIIDHGWVD---EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           A+S+F+  ID+       E   S L+    K  + D    +  +M    +     +   L
Sbjct: 24  AVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSAL 83

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG- 235
              FV       A  +   MTK GF  +    ++++ G C++ Q + A+ L+S+MK +  
Sbjct: 84  TESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYD 143

Query: 236 -ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            + PD    + L+        L                                  +A  
Sbjct: 144 CVVPDCVTYNTLVNGFCKAKRLA---------------------------------EARV 170

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L +AM KG               G   PN  ++ ++I+   K G++   L L  EM + G
Sbjct: 171 LFEAMKKG---------------GDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              +VF+Y++LI   C    +E   EL  EM      P   T + + + L R      A 
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +++ M  +G  P V   T+L   LCK+G+A +A + L  MVQ+G  P  + Y+  + GL
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGL 335

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG--LIP 532
               R+D A  +   +   G  PD V YN ++ GLC A ++ EA DL+  ++++   + P
Sbjct: 336 CKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKP 395

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V T N LI G CK G +  A    S M+E      +++TY  LI+G   A +  +A+ L
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVEM-GLQGNIVTYNFLIEGYLAARKLIEALKL 454

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           W    E G +PN +T+  +I GLCK      A   F  MK+ G++P +  + AL+++   
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514

Query: 653 ELNPPLAFEVLKEM 666
           E +   A  + +EM
Sbjct: 515 EDSLEQARSLFQEM 528



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 233/530 (43%), Gaps = 48/530 (9%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA +LF+ +K+ G C PN  +Y+ L++  CKS  V      L+EM+  G   D +  + L
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C  G  +    +F+E++        V +S L+    + G   +A E+++ M    +
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           R +   + VL  G  K  R   A+++ D M + G       Y+V++ GLCK  +++ A  
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           +   M   G  PD                                  +  N++++ L   
Sbjct: 347 VVEMMVKKGKKPD---------------------------------AVTYNTLLKGLCGA 373

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I +A +L +              +L+  K  V P+  + + +I  L K+G++  A  +
Sbjct: 374 GKIHEAMDLWK--------------LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI 419

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M ++G   N+  YN LI+G   + +L E+ +L +   ESGF P   T + M   LC+
Sbjct: 420 HSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCK 479

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            Q +  A  L  KM+  G  P V     L+  LC+     +A     +M       D+V 
Sbjct: 480 MQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVS 539

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           ++  I G +    V  A EL  ++      PD V ++I+I+   K   + EA  L+ +M+
Sbjct: 540 FNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMV 599

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           + G +P V  ++ L+ G+   G  ++ +  L +M +K+      +T T L
Sbjct: 600 SCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/532 (22%), Positives = 219/532 (41%), Gaps = 60/532 (11%)

Query: 7   RARRIAPLRVLAQDVVKS-RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
           +A+R+A  RVL + + K   C  +      LI C    G V E   L ++++REGL    
Sbjct: 161 KAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL---- 216

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
                                             D +  + L+  +C  G  +    +F+
Sbjct: 217 --------------------------------KADVFVYSSLISAFCGEGDIETGRELFD 244

Query: 126 EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           E++        V +S L+    + G   +A E+++ M    +R +   + VL  G  K  
Sbjct: 245 EMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNG 304

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R   A+++ D M + G       Y+V++ GLCK  +++ A  +   M   G  PD    +
Sbjct: 305 RAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYN 364

Query: 245 KLITSCSDEGELTLLVKEIW-----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            L+      G++   + ++W     E   V      CN++++ L   G +  A  +  +M
Sbjct: 365 TLLKGLCGAGKIHEAM-DLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSM 423

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++            M  +G    N  +++ +I   L   KL  AL L++   + G   N 
Sbjct: 424 VE------------MGLQG----NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNS 467

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ +I+GLC    L  +  L  +M++SG +PT    N++   LCR   +  A +L ++
Sbjct: 468 MTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQE 527

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           MR   H   V    ++I    K G    A   L++M     +PD V +S  I     +  
Sbjct: 528 MRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGM 587

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           +D A+ L+  + + G  P VV ++ ++ G        +   L ++M  K ++
Sbjct: 588 LDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVV 639


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 237/489 (48%), Gaps = 21/489 (4%)

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            + + R ++  +   I   VK S V K L+LF++M     +    +Y+V+I GLCK +Q++
Sbjct: 545  ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMK 604

Query: 223  MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
             A QL+ EM    + P     + LI     +G  E +  V+E  +  ++    +  N+++
Sbjct: 605  DAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLL 664

Query: 281  RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
            + L   G ++ A N+L  M       D G            P+  +F I+ +    + K 
Sbjct: 665  KGLFKAGMVEDAENVLTEM------KDQGF----------VPDAFTFSILFDGYSSNDKA 708

Query: 341  DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNS 399
            D AL ++      G   N +  + L++ LC   ++E++ E+L REM + G  P     N+
Sbjct: 709  DAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK-GLVPNEVLYNT 767

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            M     R+ D+VGA   +  M  QG +P       LI+  C+ G    A + +  M  +G
Sbjct: 768  MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              P +  Y+  IGG       D   +L +++  +G  P+VV+Y  +I+ LCK  ++ EA+
Sbjct: 828  VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 887

Query: 520  DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             +  +M  +G+ P+V  YN+LI+G C  G I+ A      M  K+    +++TY TLIDG
Sbjct: 888  IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF-KKGIELNLVTYNTLIDG 946

Query: 580  LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            L + G+  +A  +  E+  KG  P+  T+ +LI+G       +  +  +  MK  G+KP 
Sbjct: 947  LSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006

Query: 640  MFVFVALIS 648
            +  +  LIS
Sbjct: 1007 LKTYHLLIS 1015



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 171/681 (25%), Positives = 299/681 (43%), Gaps = 57/681 (8%)

Query: 40   LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
            L    ++ EA  LF  ++ EG+  P++ S   LL+ L K+    +       + +  +  
Sbjct: 492  LNESKMISEAADLFFALRNEGI-FPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 550

Query: 100  DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACEL 157
             K+     +Q         K L +FN +  H  +   VF  ++L+    K  ++  A +L
Sbjct: 551  SKFMYGKAIQAAVKLSDVGKGLELFNRM-KHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609

Query: 158  IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
             + M    +  +  T+  LI G+ K    +K+ ++ ++M           ++ ++ GL K
Sbjct: 610  FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669

Query: 218  NKQLEMALQLYSEMKGSGITPDFEILSKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLL 275
               +E A  + +EMK  G  PD    S L    S +D+ +  L V E   D  +      
Sbjct: 670  AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729

Query: 276  CNSIMRILVSNGSIDQAYNLL-----QAMIKGEPIAD------------VGVEMLM--IF 316
            C+ ++  L   G I++A  +L     + ++  E + +            VG  M +  + 
Sbjct: 730  CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789

Query: 317  KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            K  + P+  +++ +I T  + G ++ A     +M   G   +V  YN LI G       +
Sbjct: 790  KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849

Query: 377  ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + ++LL+EME++G  P   +  ++  CLC+   ++ A  + R M  +G  P V+   +LI
Sbjct: 850  KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909

Query: 437  KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               C  GK  +AFRF  +M ++G   ++V Y+  I GL    ++  A ++  +I   G  
Sbjct: 910  DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLK 969

Query: 497  PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI--------------- 541
            PDV  YN +ISG   A  V     L+ EM T G+ P++ TY+LLI               
Sbjct: 970  PDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIF 1029

Query: 542  ------------NG----WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
                        NG    +   G++D+A     +M+EK  G  D  TY +LI G    G+
Sbjct: 1030 GEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGL-DKTTYNSLILGQLKVGK 1088

Query: 586  PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              +   L +EM+ +   P   T+  ++ G C+      A V +R M+EKG+  D+ +   
Sbjct: 1089 LCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDE 1148

Query: 646  LISAFLSELNPPLAFEVLKEM 666
            L+S    E     A  V+ EM
Sbjct: 1149 LVSGLKEEWRSKEAENVISEM 1169



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 242/544 (44%), Gaps = 56/544 (10%)

Query: 64   PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
            P+  ++N LL+ L K+  V+  E  L EM+D G+  D +T + L   Y ++ + D AL V
Sbjct: 655  PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714

Query: 124  FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +   +D G  ++ +  SILL A  K G+++KA E++ R     +  NE  +  +I G+ +
Sbjct: 715  YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774

Query: 183  KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            K  +  A    D M K G   D   Y+ +I   C+   +E A Q  ++MK  G++P  E 
Sbjct: 775  KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVET 834

Query: 243  LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID----QAYNLLQA 298
             + LI     + E       + E  D        N  M  +VS G++     +   LL+A
Sbjct: 835  YNILIGGYGRKYEFDKCFDLLKEMED--------NGTMPNVVSYGTLINCLCKGSKLLEA 886

Query: 299  MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
             I    + D GV          SPN   ++++I+     GK++ A     EM + G   N
Sbjct: 887  QIVKRDMEDRGV----------SPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELN 936

Query: 359  VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
            +  YN LIDGL  + +L E+ ++L E+   G KP  FT NS+        +V   + L  
Sbjct: 937  LVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYE 996

Query: 419  KMRVQGHEPWVKHNTLLIK-------ELCK------------------------HGKAME 447
            +M+  G +P +K   LLI        EL K                        HG   +
Sbjct: 997  EMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDK 1056

Query: 448  AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            AF     M+++    D   Y++ I G + + ++     L  ++ A    P+   Y+II+ 
Sbjct: 1057 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVK 1116

Query: 508  GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            G C+ +    A   + EM  KGL+  V   + L++G  +     +A   +S M  ++ G 
Sbjct: 1117 GHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLG- 1175

Query: 568  PDVI 571
             DVI
Sbjct: 1176 -DVI 1178



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 164/378 (43%), Gaps = 2/378 (0%)

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           D +Y LL  ++    +     ++    +   + P++ S  ++++ L+K  +  + +++F 
Sbjct: 482 DFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFL 541

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            + +     + F+Y   I      + + +  EL   M+     PT F  N +   LC+ +
Sbjct: 542 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVR 601

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A  L  +M  +   P +     LI   CK G   ++F+    M  +   P ++ ++
Sbjct: 602 QMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFN 661

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             + GL     V+ A  +  ++   G  PD   ++I+  G     +   A  ++   +  
Sbjct: 662 TLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDS 721

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL  +  T ++L+N  CK G I++A   L R + K    P+ + Y T+IDG    G    
Sbjct: 722 GLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK-GLVPNEVLYNTMIDGYSRKGDLVG 780

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A M  + ME++G  P+ + +  LI   C+      A      MK KG+ P +  +  LI 
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIG 840

Query: 649 AFLSELNPPLAFEVLKEM 666
            +  +      F++LKEM
Sbjct: 841 GYGRKYEFDKCFDLLKEM 858



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 16/224 (7%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI  L   G + EA  +  ++ R+GL  P+ ++YN L+     + +V       +EM+  
Sbjct: 943  LIDGLSMNGKLAEAEDMLLEISRKGL-KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTS 1001

Query: 96   GWGYDKYTLTPLLQVY------CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWG 149
            G       + P L+ Y      C     +    +F E+      D  V++ +L  ++  G
Sbjct: 1002 G-------IKPTLKTYHLLISLCTKEGIELTKKIFGEM--SLQPDLLVYNGVLHCYAVHG 1052

Query: 150  EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            ++DKA  L ++M + +I L++ T+  LI G +K  ++ +   L D+M       +A  YD
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYD 1112

Query: 210  VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +I+ G C+ K    A   Y EM+  G+  D  I  +L++   +E
Sbjct: 1113 IIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEE 1156


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 285/629 (45%), Gaps = 38/629 (6%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           GAL   +    + G+  EA  +  +V+R G   P+  +   LL  L +S  V       +
Sbjct: 150 GALRLALHAFLAAGMAAEALDVLTRVRRSGK-TPSLSALAALLRLLFRSGEVHAAWNVFE 208

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
           EM   G      T   ++  +C+ G    A  +   + + G V     ++IL+     +G
Sbjct: 209 EMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFG 268

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
               A +L E M          T+ +L+     + R+ +A +LFD+M + G  ++   ++
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFN 328

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           V+I G  K  +++ A   Y EMK  G+ PD    + +       G    LV     D D+
Sbjct: 329 VLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLV----HDHDM 384

Query: 270 NTMTLLCNSIMRILVS----NGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNT 324
               +L +  M +LV     +  +D A+ LL+  I +G P++  G               
Sbjct: 385 FGSHMLADG-MDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTG--------------- 428

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             F+ +I    K+G  + A  L+R M ++G   +   +N LI GLCN  RL+E+  LL  
Sbjct: 429 --FNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEH 486

Query: 385 MEESGF-KPTHFT--LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           M   G+   T FT  L++ FR      + V AL     M   G +P     +  I  LC+
Sbjct: 487 MVSKGYCLSTSFTICLDASFR----EGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCR 542

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                EA++   +M   G +P+   Y++ I  L     +  AL+L +++  +G  PD+  
Sbjct: 543 LDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYT 602

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
            NI+I GLC+  ++   ++L  +M + GL P   TYN +IN +C++ +++ AM  +++ML
Sbjct: 603 SNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKML 662

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 PD+ TY   +  LC     + A  + +E+   GC P+ +T+  L+ G+C     
Sbjct: 663 AAGC-EPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLD 721

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
           RA ++  R++K    +P+       +S F
Sbjct: 722 RAMILTGRLIK-MAFQPNTITLNVFLSHF 749



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 227/556 (40%), Gaps = 91/556 (16%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + GEV  A  + E M     R +  TF  +I GF  +  V  A  L   M + G   +  
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y+++I G C       A +L+ EM  SG  P                  T++   I  D
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEP------------------TVVTYNILVD 297

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                          +L   G + +A  L   M      A VG++           NT +
Sbjct: 298 ---------------VLCHEGRMPEARRLFDEM------AQVGIQ----------ANTIT 326

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIG-----CMQNV--------------------FL 361
           F+++I+   K G++D A + +REM   G     C  N+                    F 
Sbjct: 327 FNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFG 386

Query: 362 YNNLIDG-------LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + L DG       LC   RL++++ELLR   E G   +    N++     +      A 
Sbjct: 387 SHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAF 446

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L R M   G  P       LI  LC  G+  EA   L  MV +G+     C S +    
Sbjct: 447 ELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY-----CLSTSFTIC 501

Query: 475 IDIK----RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +D          AL+ + D+   G  PD +A++  I+GLC+   V EA   F EM  +G+
Sbjct: 502 LDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGI 561

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           +P+  TYN +I+  C++GN+ +A L L + + +    PD+ T   LIDGLC  G+ +   
Sbjct: 562 VPNNFTYNSIISALCRAGNMTEA-LKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVD 620

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L  +M   G  P+ +T+  +I   C+     +A+     M   G +PD+F +   + + 
Sbjct: 621 NLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSL 680

Query: 651 LSELNPPLAFEVLKEM 666
            S      A +VL E+
Sbjct: 681 CSNHMLNQAGKVLDEL 696



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 208/483 (43%), Gaps = 31/483 (6%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +H F+      +AL +  ++ +SG     +    ++  L ++ ++  A  ++ EM   G 
Sbjct: 156 LHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGP 215

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--AYN 294
            P     + +I      G    LV+             + + ++ I+   G +    +YN
Sbjct: 216 RPSLATFNAMILGFCHRG----LVR-------------VASGLLGIMGEFGIVPNVCSYN 258

Query: 295 LLQAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +L   IKG  +     +   +F    +    P   +++I+++ L  +G++  A  LF EM
Sbjct: 259 IL---IKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q+G   N   +N LIDG   + R++++    REM+  G  P   T N +          
Sbjct: 316 AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNII---AAGAYKF 372

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  LV    + G         +L+  LC   +  +A+  L   +++G    +  ++A 
Sbjct: 373 GHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNAL 432

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I         + A EL+R +   G  P    +N +I GLC   R+ EA+ L   M++KG 
Sbjct: 433 IAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGY 492

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
             S  ++ + ++   + GN   A+ C   M  K    PD I ++  I+GLC     ++A 
Sbjct: 493 CLST-SFTICLDASFREGNAVCALKCWDDM-GKLGLQPDFIAFSAYINGLCRLDYVNEAY 550

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             + EM  +G  PN  T+ ++I+ LC+      AL   + M++ G+ PD++    LI   
Sbjct: 551 QAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGL 610

Query: 651 LSE 653
             E
Sbjct: 611 CRE 613



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 220/510 (43%), Gaps = 49/510 (9%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +++ +S C  +      L+  L   G + EA  LFD++ + G+   N  ++N L++  
Sbjct: 276 LFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQA-NTITFNVLIDGY 334

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K+  +D      +EM+  G   D  T      +   + +F  A  +   + DH     H
Sbjct: 335 AKTGRMDQACAAYREMKARGLVPDSCTFN---IIAAGAYKFGHAAQL---VHDHDMFGSH 388

Query: 137 VFS---ILLVAFSKWG-EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           + +    +LV    W   +D A EL+    +    L+   F  LI  + K+   ++A +L
Sbjct: 389 MLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFEL 448

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +  M K G A  ++ ++ +I GLC   +L+ A  L   M   G       LS   T C D
Sbjct: 449 YRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC-----LSTSFTICLD 503

Query: 253 ----EGELTLLVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
               EG     +K  W+D        D    +   N + R+      +++AY     M  
Sbjct: 504 ASFREGNAVCALK-CWDDMGKLGLQPDFIAFSAYINGLCRL----DYVNEAYQAFAEMTA 558

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          +G V PN  +++ II+ L + G +  AL L + M Q G + +++ 
Sbjct: 559 ---------------RGIV-PNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYT 602

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
            N LIDGLC   +LE    LL +M  +G  P   T N++    CR +D+  A+N + KM 
Sbjct: 603 SNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKML 662

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G EP +    + +  LC +    +A + L ++V  G  PD V Y+  + G+     +D
Sbjct: 663 AAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICS-DVLD 721

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCK 511
            A+ L   +      P+ +  N+ +S  CK
Sbjct: 722 RAMILTGRLIKMAFQPNTITLNVFLSHFCK 751



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/329 (19%), Positives = 126/329 (38%), Gaps = 54/329 (16%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S     +LI  L + G ++EA +L + +  +G C+  +++  CL  +  +  +V  ++  
Sbjct: 460 SSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTI-CLDASFREGNAVCALKC- 517

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
             +M   G   D    +  +   C     ++A   F E+   G V +   ++ ++ A  +
Sbjct: 518 WDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCR 577

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G + +A +L + M    +  +  T  +LI G  ++ +++    L   M  +G   D   
Sbjct: 578 AGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVT 637

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+ II   C+ K +  A+   ++M  +G  PD                  +    IW   
Sbjct: 638 YNTIINAYCRAKDMNSAMNFMNKMLAAGCEPD------------------IFTYNIW--- 676

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLM------------ 314
                       M  L SN  ++QA  +L  ++  G P   V    LM            
Sbjct: 677 ------------MHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAM 724

Query: 315 -----IFKGTVSPNTSSFDIIINTLLKDG 338
                + K    PNT + ++ ++   K G
Sbjct: 725 ILTGRLIKMAFQPNTITLNVFLSHFCKQG 753


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/572 (25%), Positives = 249/572 (43%), Gaps = 86/572 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL+++A  +FD++ +   C   +  YN  +  L      DL      +M   G+    +T
Sbjct: 23  GLIDKAVQVFDEMSQSN-CRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFT 81

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
            +  +   C    F          ID                          EL+  M+ 
Sbjct: 82  YSRFITGLCKVKNF--------TFID--------------------------ELLHDMET 107

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            N   +   F + +H    + R+D AL++F+K+ K+G   D   Y +II G+CK K+ + 
Sbjct: 108 LNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDT 167

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A+Q + +M   G +PD                                    C +I+  L
Sbjct: 168 AIQFWRDMIHKGFSPD---------------------------------NKACGAIVVGL 194

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                +D AY L+  ++K                G V  +T  ++ +I+   + G++D A
Sbjct: 195 CDGRKVDLAYELIIDVMKS---------------GRVKLSTLVYNALISGFCRAGRIDKA 239

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++   M + GC  ++  YN  ++  C+   L+++ +LL+ ME SG +P  ++ N + + 
Sbjct: 240 QAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKG 299

Query: 404 LCRRQDVVGA-LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           +C+      A L +  KM  +G    V +NT+ IK  CK G    A++   +M Q+G  P
Sbjct: 300 ICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTI-IKAFCKIGDTTSAYKLFEEMGQKGIPP 358

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+V ++  I   +     ++A +L   +   G  PD + Y  II  LCK+ +V  A  +F
Sbjct: 359 DVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIF 418

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +M+ +G+ P V ++N LING+CK   + +AM     M  + S  PD +TY  +I GL  
Sbjct: 419 CDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGS-YPDEVTYKLIIGGLIE 477

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             +   A M+W +M +KG   +R     LI G
Sbjct: 478 EKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 232/499 (46%), Gaps = 32/499 (6%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G+VK   +DKA+Q+FD+M++S     +  Y+  IG L  + + ++A   YS+M   G 
Sbjct: 16  IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-------NSIMRILVSNGSI 289
           +      S+ IT        T  + E+  D +    TL C       N  + +L   G I
Sbjct: 76  SLSSFTYSRFITGLCKVKNFTF-IDELLHDME----TLNCLPDIWAFNIYLHLLFVEGRI 130

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D A  + + ++K                    P+  ++ III+ + K  K D A+  +R+
Sbjct: 131 DLALEVFEKIVKNGR----------------KPDVVTYTIIIHGVCKIKKFDTAIQFWRD 174

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQ 408
           M   G   +      ++ GLC+  +++ +YEL+ ++ +SG  K +    N++    CR  
Sbjct: 175 MIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAG 234

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A  +   MR  G EP +    + +   C      +A + L  M + G  PD+  Y+
Sbjct: 235 RIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYN 294

Query: 469 AAIGGLIDIKRVDLALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             + G+      D A  L  + +   G C DVV+YN II   CK      A  LF EM  
Sbjct: 295 QLLKGICKGNCPDKAYLLMTNKMWPKGLC-DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQ 353

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG+ P V T+ + I  +   G+ + A   L +M E    SPD I YTT+ID LC +G+ +
Sbjct: 354 KGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEM-GLSPDCIFYTTIIDHLCKSGKVE 412

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A  ++ +M E+G +P+ I+F ALI G CKC R   A+  +  M+ +G  PD   +  +I
Sbjct: 413 MAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLII 472

Query: 648 SAFLSELNPPLAFEVLKEM 666
              + E    +A  V  +M
Sbjct: 473 GGLIEEKKISIACMVWGQM 491



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 155/352 (44%), Gaps = 35/352 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKS-RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           L   R++     L  DV+KS R  +S      LI      G +++A  +   ++R G C 
Sbjct: 194 LCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNG-CE 252

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA-LS 122
           P+  +YN  L   C    +D  +  LK M+  G   D Y+   LL+  C     DKA L 
Sbjct: 253 PDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL 312

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           + N++   G  D   ++ ++ AF K G+   A +L E M    I  +  TF + I  F+ 
Sbjct: 313 MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLG 372

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K   + A +L D+MT+ G + D   Y  II  LCK+ ++EMA  ++ +M   GI+PD   
Sbjct: 373 KGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVIS 432

Query: 243 LSKLIT----------------------SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
            + LI                       S  DE    L++  + E++ ++   ++   +M
Sbjct: 433 FNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMM 492

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK--GTVSPNTSSFDII 330
                  ++D+A  + Q +I+G  I +      + FK     SP   SF II
Sbjct: 493 D---KGFTLDRA--IAQTLIRGNSIENASTSRCLDFKFHQNYSP---SFRII 536


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 226/532 (42%), Gaps = 100/532 (18%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           +  +I+GF K  +VD+A +L D+M + G   D  ++  +I GLC+  +++ AL+ +  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G   +P                               N +T   N+++  L     ID+ 
Sbjct: 61  GEECSP-------------------------------NVITY--NTVVNGLCKANRIDEG 87

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L   M K    A  G E          P+  S+  +I+ L K  ++D A   F+ M  
Sbjct: 88  LELFDDMEKRYE-ASHGCE----------PDVISYSTVIDALCKAQRVDKAYEYFKRMRA 136

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESY--------------------------------- 379
           +GC  NV  Y++LIDGLC  +R++E+Y                                 
Sbjct: 137 VGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSE 196

Query: 380 --ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
             ELL  M+E GF       N+M   L +  +   A     ++   G +P V    + + 
Sbjct: 197 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH 256

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK GK  EA+R L +MV+    PD++ YS+ I G     R+D A ++F  +  H C P
Sbjct: 257 GLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 316

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
             V +  ++ G  + ++  EA  +  +M+  G IP + TYN+L++  C + +++ A+   
Sbjct: 317 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 376

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL-- 615
            +M  K+   PD  TY  LI  LC A R D+A    + ME     PN     AL+  L  
Sbjct: 377 HKMKRKKR-QPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435

Query: 616 -----------------CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                            CK   P  A+     M  KG++PD   +VA++ + 
Sbjct: 436 QGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 230/551 (41%), Gaps = 104/551 (18%)

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV---KEI 263
           MY  +I G CK  Q++ A +L  EMK  G+  D  + S LI     +G +   +   K +
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
            E+   N +T   N+++  L     ID+   L   M K    A  G E          P+
Sbjct: 61  GEECSPNVITY--NTVVNGLCKANRIDEGLELFDDMEKRYE-ASHGCE----------PD 107

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY---- 379
             S+  +I+ L K  ++D A   F+ M  +GC  NV  Y++LIDGLC  +R++E+Y    
Sbjct: 108 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLM 167

Query: 380 -------------------------------ELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
                                          ELL  M+E GF       N+M   L +  
Sbjct: 168 QLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 227

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +   A     ++   G +P V    + +  LCK GK  EA+R L +MV+    PD++ YS
Sbjct: 228 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYS 287

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I G     R+D A ++F  +  H C P  V +  ++ G  + ++  EA  +  +M+  
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAM------------------------LCLSRMLEKE 564
           G IP + TYN+L++  C + +++ A+                        LC +R +++ 
Sbjct: 348 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEA 407

Query: 565 SGSPDVITYTTLIDG-----------------------------LCIAGRPDDAIMLWNE 595
               DV+    ++                               +C AG PD+A+ +  +
Sbjct: 408 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQ 467

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M  KG  P+  T++A++  LC  DR  +A+  F  M  +G  P +  +  LI    S   
Sbjct: 468 MVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADM 527

Query: 656 PPLAFEVLKEM 666
              AF + + M
Sbjct: 528 ADDAFRIFEAM 538



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 139/579 (24%), Positives = 239/579 (41%), Gaps = 55/579 (9%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  ++   CK+  VD     L EM++ G   D    + L+Q  C  G+ D+AL  F  + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC--------VLIHGF 180
           +    +   ++ ++    K   +D+  EL    DD   R      C         +I   
Sbjct: 62  EECSPNVITYNTVVNGLCKANRIDEGLELF---DDMEKRYEASHGCEPDVISYSTVIDAL 118

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  RVDKA + F +M   G A +   Y  +I GLCK  +++ A  L  ++KG  + P  
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178

Query: 241 EILSKLITSCSDEG------ELTLLVKE----------------IWEDRDVNTMTLLCNS 278
              + ++     +G      EL L +KE                +W++   +     C  
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKN---DEQEKACQF 235

Query: 279 IMRILVSNGSID-QAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
             R+L S    +   YN+ +  + K   + +    +L + +  V+P+  ++  II+   K
Sbjct: 236 FERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 295

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G++D A  +F  M    C+ +   +  L+ G     +  E++ +  +M  +GF P   T
Sbjct: 296 AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 355

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +  C+C    V  AL +  KM+ +  +P       LI+ LC+  +  EA  FL  M 
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +  +P+     A +  L     VD A  +  ++                  +CKA    
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPD 459

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA ++  +M+ KG+ P  ATY  ++   C    +D A+    +M  +   +P ++TYT L
Sbjct: 460 EAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASR-GCAPGLVTYTLL 518

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           I   C A   DDA  ++  M   G  P   T   L + L
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCL 557



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 226/527 (42%), Gaps = 53/527 (10%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKRE----GLCVPNNYSYNCLLEALCKSCSV 82
           SP  + +  ++  L     ++E   LFD +++       C P+  SY+ +++ALCK+  V
Sbjct: 65  SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRV 124

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILL 142
           D      K M+  G   +  T + L+   C   + D+A S+  ++     V   ++   +
Sbjct: 125 DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAV 184

Query: 143 V-AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           V  F + G+  +  EL+  M +    +N   F  ++H   K    +KA Q F+++ KSG 
Sbjct: 185 VNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK 244

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----- 256
             +   Y+V + GLCK  +++ A ++  EM  S +TPD    S +I      G +     
Sbjct: 245 KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADD 304

Query: 257 ---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
               ++V E      V  MTLL          +    +A+ + + M+    I        
Sbjct: 305 VFTRMMVHECIP-HPVTFMTLLHG-----FSEHKKSREAFRVHEDMVNAGFI-------- 350

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P   +++++++ +     ++ AL ++ +M +     +   Y  LI  LC + 
Sbjct: 351 --------PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR 402

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R++E+ E L  ME     P     +++   LC++ +V  A +++                
Sbjct: 403 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN-------------- 448

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             + E+CK G+  EA   +  MV +G  PD   Y A +  L  + RVD A+  F  + + 
Sbjct: 449 --VVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASR 506

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           GC P +V Y ++I   C A    +A  +F  M+  G  P   T   L
Sbjct: 507 GCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 173/360 (48%), Gaps = 15/360 (4%)

Query: 55  QVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNS 114
            +K +G  + N   +N +L AL K+   +      + +   G   +  T    +   C +
Sbjct: 203 HMKEKGFGI-NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 261

Query: 115 GQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G+ D+A  +  E+++     D   +S ++  F K G +DKA ++  RM       +  TF
Sbjct: 262 GKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 321

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             L+HGF +  +  +A ++ + M  +GF      Y+V++  +C    +E AL++Y +MK 
Sbjct: 322 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 381

Query: 234 SGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
               PD    + LI   C     DE +  L   ++ E  +V     +C++++ +L   G 
Sbjct: 382 KKRQPDANTYAPLIQCLCRARRVDEAKEFL---DVMEADNVVPNGAICHALVEVLCKQGE 438

Query: 289 IDQAYNLLQAMIK----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +D+A ++L  +++    GEP   V V   M+ KG V P+ +++  ++ +L    ++D A+
Sbjct: 439 VDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKG-VRPDEATYVAVLRSLCGLDRVDSAI 497

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           + F +M   GC   +  Y  LI   C+++  ++++ +   M  +GF P   T+ ++  CL
Sbjct: 498 AEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCL 557



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 30  PG--ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           PG      L+ C+     VE A  ++ ++KR+    P+  +Y  L++ LC++  VD  + 
Sbjct: 351 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR-QPDANTYAPLIQCLCRARRVDEAKE 409

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK 147
            L  M+      +      L++V C  G+ D+A SV + +++                 K
Sbjct: 410 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE---------------ICK 454

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            GE D+A E+IE+M    +R +E T+  ++       RVD A+  F+KM   G A     
Sbjct: 455 AGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVT 514

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           Y ++IG  C     + A +++  M  +G TP  + +  L +   D G   LLV++
Sbjct: 515 YTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVRQ 569


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 167/627 (26%), Positives = 276/627 (44%), Gaps = 43/627 (6%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V S  F      G ++  L   G + E  +L  ++ + G+ + NN SY  LL+AL K+ 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNL-NNVSYTILLDALFKAG 59

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
            V    M L  M   G  +D    T L+     SGQ  +A  +F  +     V  ++ +S
Sbjct: 60  KVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYS 119

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+ +  K G+++ A   +  M++ +   N  T+  LI+G+VK+  +  A ++  KM   
Sbjct: 120 ALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHK 179

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
               +   Y +++ G  K    ++AL LYS+MK  G+  +  IL   + +    G +   
Sbjct: 180 NAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEA 239

Query: 260 VKEIWEDRDVNTMTLLCN--SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI-- 315
            + + +         L N  ++M   + +G +  A NL Q M     + D+    ++I  
Sbjct: 240 EELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINC 299

Query: 316 -FK---------------GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            FK                 +SP+ ++++ ++N   K G    AL L+ EM     + N 
Sbjct: 300 LFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNA 359

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVGALNLV 417
              N +I+GLC + R+E + ++L+EM   G  PT  T   +       RR D +      
Sbjct: 360 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTI------ 413

Query: 418 RKMRVQGHEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
               +Q HE  V            +LI  LCK G   +A   L DM + G + D   Y+A
Sbjct: 414 ----LQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 469

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G      +  A   +  + +    PD+  YN+++ GL KA  + EA+DL +E+  +G
Sbjct: 470 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG 529

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L+P+  TY  L+ G CK  N  + +     M+ K    P    Y  LI      G+   A
Sbjct: 530 LVPNACTYETLMCGHCKVRNTKECLRIYCEMVIK-GFIPKPRAYNMLIGYFSKMGKMKQA 588

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLC 616
             L NEM+ KG +P   T+  LI G C
Sbjct: 589 KELMNEMQTKGVSPTCTTYDILICGWC 615



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 197/428 (46%), Gaps = 36/428 (8%)

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M GSGI PD      ++      G+L+   LL++E+ +      M +  N++   +    
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGK------MGMNLNNVSYTI---- 50

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDII-----INTLLKDGKLD 341
                  LL A+ K   +A+  + +  MI +G      ++FD+I     I+ L K G++ 
Sbjct: 51  -------LLDALFKAGKVAEALMTLACMIVRG------NNFDVIACTVLIDGLFKSGQIK 97

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  LF  + Q+  + N   Y+ LID  C    +  +   L EMEE    P   T +S+ 
Sbjct: 98  EAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLI 157

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
               ++  +  A  ++RKM  +   P +    +L+    K G    A    + M Q G  
Sbjct: 158 NGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLK 217

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            ++    A +  +    R++ A EL   + + G  PD+V Y  ++ G  K+ +V+ A +L
Sbjct: 218 DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNL 277

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGL 580
             EM +K ++  + T+N+LIN   K G  D   +  S M  +E G SPD+ TY T+++G 
Sbjct: 278 AQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESI-YSAM--REMGLSPDLATYNTMLNGN 334

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G    A+ LWNEM+ +   PN IT   +I GLC+  R   A+   + M   G+ P  
Sbjct: 335 FKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTS 394

Query: 641 FVFVALIS 648
             +  L++
Sbjct: 395 TTYRILLN 402



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 147/633 (23%), Positives = 265/633 (41%), Gaps = 79/633 (12%)

Query: 5   LSRARRIA-PLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           L +A ++A  L  LA  +V+   F    A   LI  L   G ++EA  LF  + +  L V
Sbjct: 55  LFKAGKVAEALMTLACMIVRGNNF-DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL-V 112

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +Y+ L+++ CK   ++  E  L EM++     +  T + L+  Y   G    A  V
Sbjct: 113 PNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 172

Query: 124 FNEIIDH-------------------GWVD---------------EHVFSILLVAF---- 145
             +++                     GW D               ++VF  +L AF    
Sbjct: 173 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF--ILDAFVNNM 230

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            + G +++A EL+ +M    ++ +   +  L+ GF+K  +V  AL L  +MT      D 
Sbjct: 231 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 290

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             ++V+I  L K  + +    +YS M+  G++PD    + ++     +G  T  + E+W 
Sbjct: 291 VTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSAL-ELWN 348

Query: 266 D---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIFKGTV 320
           +   R +    + CN ++  L   G ++ A ++L+ M+     P +     +L I   + 
Sbjct: 349 EMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSR 408

Query: 321 SPNT-----------------SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
             +T                   ++I+I+ L K G    A ++ ++M + G + +   YN
Sbjct: 409 RADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYN 468

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI G C S+ L+ ++     M      P   T N +   L +   +  A +L+ +++ +
Sbjct: 469 ALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKR 528

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P       L+   CK     E  R   +MV +GF+P    Y+  IG    + ++  A
Sbjct: 529 GLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQA 588

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLC------------KAQRVAEAEDLFNEMITKGLI 531
            EL  ++   G  P    Y+I+I G C            K    AEA+ LF EM  +G +
Sbjct: 589 KELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFV 648

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           P  +T   + + +   G    A + L    +++
Sbjct: 649 PCESTQACISSTFAAPGKKADARMLLKSTYKRK 681



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 35/351 (9%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +V  + +++ GLC   +L E   LLREM + G    + +   +   L +   
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           V  AL  +  M V+G+   V   T+LI  L K G+  EA     ++ Q   +P+ + YSA
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I     +  ++ A     ++    C P+V+ Y+ +I+G  K   + +A  +  +M+ K 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE-----------------KESG------ 566
            +P++ TY +L++G  K+G  D A+   S+M +                 K SG      
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 567 -----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
                       PD++ YT L+DG   +G+   A+ L  EM  K    + +TF  LI  L
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            K  +     + +  M+E G+ PD+  +  +++    + N   A E+  EM
Sbjct: 301 FKLGKSDTESI-YSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEM 350


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 272/608 (44%), Gaps = 25/608 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  +  +++ LL+ L        +E+ L+ M+       +   + L+  Y  SG  D+AL
Sbjct: 91  CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRAL 150

Query: 122 SVFNEIID-HGWVDEHVFS-ILLVAFSKWGEVDKACELIERM----DDCNIRLNEKTFCV 175
            +F+ + + H      V S +LL    K G+VD A +L ++M    D     ++  T  +
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 210

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++ G     ++++  +L               Y++II G CK   L+ A +  +E+K  G
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           + P  E    LI      GE   + + + E   R +N    + N+++      G + +A 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +L+ M      A++G            P+ ++++I+IN   K G+++ A  L  +  + 
Sbjct: 331 EMLRRM------AEMGC----------GPDITTYNIMINFSCKGGRIEEADELLEKAKER 374

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + N F Y  L+   C      ++  +L  + E G K    +  +    +    ++  A
Sbjct: 375 GLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVA 434

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L +  KM  +G  P  +   +L+  LCK G+       L++M+     PD+  ++  I G
Sbjct: 435 LMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDG 494

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            I    +D A+++F+ I   G  P +V YN +I G CK  ++ +A    NEM +    P 
Sbjct: 495 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPD 554

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TY+ +I+G+ K  ++  A+    +M+ K    P+VITYT+LI+G C       A  ++
Sbjct: 555 EYTYSTVIDGYVKQHDMSSALKMFGQMM-KHKFKPNVITYTSLINGFCKKADMIRAEKVF 613

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           + M+     PN +T+  L+ G  K  +P  A   F +M   G  P+   F  LI+   + 
Sbjct: 614 SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNT 673

Query: 654 LNPPLAFE 661
              P+  E
Sbjct: 674 ATSPVLIE 681



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 153/652 (23%), Positives = 271/652 (41%), Gaps = 83/652 (12%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL-VEMRLK 90
           A   LI      G ++ A  LF  V+    C P   + N LL  L KS  VD+ +++  K
Sbjct: 132 AFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDK 191

Query: 91  EMQ-DYGWG--YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD---EHV--FSILL 142
            +Q D G G   D YT + +++  CN G+ ++       +I H W      HV  +++++
Sbjct: 192 MLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEG----RRLIKHRWGKCCVPHVVFYNMII 247

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
             + K G++  A   +  +    +    +T+  LI+GF K    +   QL  +M   G  
Sbjct: 248 DGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 307

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----L 258
            +  +++ +I    K   +  A ++   M   G  PD    + +I      G +     L
Sbjct: 308 MNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADEL 367

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L K   ++R +         +M      G   +A  +L        IA++G +  ++   
Sbjct: 368 LEKA--KERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFR------IAEIGEKSDLV--- 416

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                  S+   I+ ++  G++D+AL +  +M + G   +  +YN L+ GLC   R+   
Sbjct: 417 -------SYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAM 469

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             LL EM +   +P  +   ++     R  ++  A+ + + +  +G +P +     +IK 
Sbjct: 470 KLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG 529

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK GK  +A   L +M      PD   YS  I G +    +  AL++F  +  H   P+
Sbjct: 530 FCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPN 589

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           V+ Y  +I+G CK   +  AE +F+ M +  L+P+V TY  L+ G+ K+G  ++A     
Sbjct: 590 VITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFE 649

Query: 559 RML-----------------------------EKESGSPD-------------------V 570
            ML                             EK+S   +                   +
Sbjct: 650 LMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVI 709

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             Y ++I  LC  G  D A +L  +M  KG   + + F AL+ GLC   + +
Sbjct: 710 AAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSK 761



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/624 (21%), Positives = 252/624 (40%), Gaps = 108/624 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLC-VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           +++ L ++G +EE   L     R G C VP+   YN +++  CK   +      L E++ 
Sbjct: 211 MVKGLCNLGKIEEGRRLIKH--RWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKM 268

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKA---------------LSVFNEIID----HGWVDE 135
            G      T   L+  +C +G+F+                 + VFN +ID    +G V E
Sbjct: 269 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTE 328

Query: 136 H-----------------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                              ++I++    K G +++A EL+E+  +  +  N+ ++  L+H
Sbjct: 329 AAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMH 388

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            + KK    KA  +  ++ + G  SD   Y   I G+    ++++AL +  +M   G+ P
Sbjct: 389 AYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFP 448

Query: 239 DFEILSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           D +I + L++    +G    + LL+ E+  DR+V     +  +++   + NG +D+A  +
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEML-DRNVQPDVYVFATLIDGFIRNGELDEAIKI 507

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + +I+               KG V P    ++ +I    K GK+  ALS   EM  +  
Sbjct: 508 FKVIIR---------------KG-VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHH 551

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             + + Y+ +IDG    + +  + ++  +M +  FKP   T  S+    C++ D++ A  
Sbjct: 552 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEK 611

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +   M+     P V   T L+    K GK   A      M+  G LP+   +   I GL 
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLT 671

Query: 476 DIKRVDLALE----------LFRD-----------------------ICAHGCCP----- 497
           +     + +E          L  D                       +C HG        
Sbjct: 672 NTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLL 731

Query: 498 -----------DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
                      D V +  ++ GLC   +  E  ++ +  + K  + +   Y+L ++ +  
Sbjct: 732 LTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLY 791

Query: 547 SGNIDQAMLCLSRMLEKESGSPDV 570
            G + +A + L  ++E    S  V
Sbjct: 792 QGRLSEASVILQTLVEDSKFSDQV 815


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 171/645 (26%), Positives = 279/645 (43%), Gaps = 49/645 (7%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +  +   LI+ L     V EA +L   + ++G C  N ++Y  L++ LCK   +   
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDG-CSLNLHTYTLLIKGLCKEGRIHGA 214

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
              L+EM   G     +T   ++  YC SG+   AL +   +  +G   D+  ++IL+  
Sbjct: 215 RRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYG 274

Query: 145 FSKWGEVDKACELIERMDDCNIR---LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
               GE  K  E  E ++D  +R       TF  +I+G+ K  R+D AL++   M  S  
Sbjct: 275 LC--GE--KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNC 330

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   Y V+I  L K  + + A +  SEM  +G+ P+  I + +I      G++   ++
Sbjct: 331 KLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALE 390

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY---NLLQAMIKGEPIADVGVEMLMIFKG 318
                            + R++   G    A+   +L+  +I+ + +      +  + + 
Sbjct: 391 -----------------VFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            ++P   ++  +I    K  + D A  LF  M Q G   +   YN L   LC S R EE+
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA 493

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           Y  L      G   T  T  S+     +  +   A  L+ KM  +G +      ++L++ 
Sbjct: 494 YSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQA 550

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK  K  EA   L  M   G   +IV Y+  I  +I   + D A  +F ++ + G  P 
Sbjct: 551 LCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 610

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              Y + IS  CK  ++ EAE L  EM   G+ P V TYN+ ING    G +D+A   L 
Sbjct: 611 ATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLK 670

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPD----DAIMLWNEME------------EKGCA 602
           RM++  S  P+  TY  L+         D    D   +WN +E            + G  
Sbjct: 671 RMIDA-SCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLN 729

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           P  +T+ ++I G CK  R   A V F  M+ K + P+  ++  LI
Sbjct: 730 PTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 244/540 (45%), Gaps = 28/540 (5%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +E+ ++IL+    +   V +A  L+  M      LN  T+ +LI G  K+ R+  A ++ 
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           ++M   G       Y+ +I G CK+ +++ AL + + M+ +G  PD    + LI      
Sbjct: 219 EEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-- 276

Query: 254 GELTLLVKEIWEDRDVN-------TMTLLCNSIMR-------------ILVSNGSID-QA 292
           GE     +E+  D  V        T T + N   +             +L SN  +D QA
Sbjct: 277 GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQA 336

Query: 293 YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           Y  L+  +IK     +    +  +F   ++PN   +  II+   K GK+  AL +FR M 
Sbjct: 337 YGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLME 396

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  N + Y++LI GL    +L ++  L+ +M+E G  P   T  ++ +  C++ +  
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 456

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  L   M   G  P  +   +L   LCK G+A EA+ FL   V++G +   V Y++ +
Sbjct: 457 NAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLV 513

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G       D A  L   +   GC  D   Y++++  LCK +++ EA  + ++M   G+ 
Sbjct: 514 DGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVK 573

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
            ++  Y ++I+   K G  D A    + M+      P   TYT  I   C  G+ ++A  
Sbjct: 574 CNIVAYTIIISEMIKEGKHDHAKSMFNEMI-SSGHKPSATTYTVFISSYCKIGQIEEAEH 632

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L  EME  G AP+ +T+   I G         A    + M +   +P+ + +  L+  FL
Sbjct: 633 LIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFL 692



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 229/506 (45%), Gaps = 27/506 (5%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++ KAC L+  M     R NE ++ +LI G  +   V +AL L   M + G + +   Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWED 266
            ++I GLCK  ++  A ++  EM   G+ P     + +I      G +   L +K + E 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNT 324
              N                   D  YN+L   + GE   D   E+L   I +G  +P  
Sbjct: 259 NGCN-----------------PDDWTYNILIYGLCGEK-PDEAEELLNDAIVRG-FTPTV 299

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F  IIN   K  ++D AL +   M    C  ++  Y  LI+ L    R +E+ E + E
Sbjct: 300 ITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSE 359

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M  +G  P      S+    C+   V  AL + R M  +G  P     + LI  L +  K
Sbjct: 360 MFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQK 419

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A   +T M ++G  P ++ Y+  I G       D A  LF  +  +G  PD  AYN+
Sbjct: 420 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 479

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +   LCK+ R   AE+ ++ ++ KG++ +  TY  L++G+ K+GN D A + + +M+  E
Sbjct: 480 LTHALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV-NE 535

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
               D  TY+ L+  LC   + ++A+ + ++M   G   N + +  +I+ + K  +   A
Sbjct: 536 GCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHA 595

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
              F  M   G KP    +   IS++
Sbjct: 596 KSMFNEMISSGHKPSATTYTVFISSY 621



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 167/711 (23%), Positives = 285/711 (40%), Gaps = 111/711 (15%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L   R +    VL   +V+  C ++      LI+ L   G +  A  + +++   G+ VP
Sbjct: 170 LCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGV-VP 228

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++YN +++  CKS  +         M+  G   D +T   L+   C   + D+A  + 
Sbjct: 229 SVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELL 287

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N+ I  G+    + F+ ++  + K   +D A  +   M   N +L+ + + VLI+  +KK
Sbjct: 288 NDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKK 347

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R  +A +   +M  +G A +  +Y  II G CK  ++  AL+++  M+  G  P+    
Sbjct: 348 CRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTY 407

Query: 244 SKLITSCSDEGELT---LLVKEIWED---RDVNTMTLLCNS------------IMRILVS 285
           S LI     + +L     L+ ++ ED     V T T L               +  ++  
Sbjct: 408 SSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467

Query: 286 NGSI--DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           NG    +QAYN+L   +     A+     L + KG V    + +  +++   K G  D A
Sbjct: 468 NGLTPDEQAYNVLTHALCKSGRAEEAYSFL-VRKGVVLTKVT-YTSLVDGFSKAGNTDFA 525

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L  +M   GC  + + Y+ L+  LC   +L E+  +L +M  SG K        +   
Sbjct: 526 AVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISE 585

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           + +      A ++  +M   GH+P     T+ I   CK G+  EA   + +M ++G  PD
Sbjct: 586 MIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPD 645

Query: 464 IVCYSAAIGG----------------------------------------LIDIKRVDLA 483
           +V Y+  I G                                        L+D   VD +
Sbjct: 646 VVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTS 705

Query: 484 -----------LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN--------- 523
                       +L   +  HG  P  V Y+ II+G CKA R+ EA  LF+         
Sbjct: 706 GMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISP 765

Query: 524 --------------------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
                                     +MI  G  P + +Y+ LI G C  G+ D+A    
Sbjct: 766 NEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLF 825

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
             +L  E  + + + +  L DGL  AG  D    L + ME + C  +  T+
Sbjct: 826 CDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETY 876



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 177/385 (45%), Gaps = 35/385 (9%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M  +G V P+  +++ +I+   K G++  AL +   M + GC  + + YN LI GLC   
Sbjct: 221 MPLRGVV-PSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-E 278

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           + +E+ ELL +    GF PT  T  ++    C+ + +  AL +   M     +  ++   
Sbjct: 279 KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYG 338

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI  L K  +  EA   +++M   G  P++V Y++ I G   + +V  ALE+FR +   
Sbjct: 339 VLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE 398

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC P+   Y+ +I GL + Q++ +A  L  +M   G+ P V TY  LI G CK    D A
Sbjct: 399 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 458

Query: 554 MLCLSRMLEKESGSPD--------------------------------VITYTTLIDGLC 581
              L  M+E+   +PD                                 +TYT+L+DG  
Sbjct: 459 FR-LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFS 517

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
            AG  D A +L  +M  +GC  +  T+  L+  LCK  +   AL     M   G+K ++ 
Sbjct: 518 KAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIV 577

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  +IS  + E     A  +  EM
Sbjct: 578 AYTIIISEMIKEGKHDHAKSMFNEM 602



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 162/363 (44%), Gaps = 70/363 (19%)

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G L  A  L   M  +GC +N + Y  LI GLC +  + E+  LL  M + G        
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDG-------- 190

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
                  C       +LNL                TLLIK LCK G+   A R L +M  
Sbjct: 191 -------C-------SLNL-------------HTYTLLIKGLCKEGRIHGARRVLEEMPL 223

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +P +  Y+A I G     R+  AL +   +  +GC PD   YNI+I GLC  ++  E
Sbjct: 224 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDE 282

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE--------------- 562
           AE+L N+ I +G  P+V T+  +ING+CK+  ID A+   + ML                
Sbjct: 283 AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLIN 342

Query: 563 -----------KESGS--------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
                      KE+ S        P+V+ YT++IDG C  G+   A+ ++  ME +GC P
Sbjct: 343 VLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRP 402

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N  T+ +LI GL +  +   A+     M+E G+ P +  +  LI     +     AF + 
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462

Query: 664 KEM 666
           + M
Sbjct: 463 EMM 465


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 241/541 (44%), Gaps = 42/541 (7%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F +    D A  L  +M+   I LN  +F +LI  F    ++  +L  F K+TK GF  D
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGS---------------GITPDFEILSKLITS 249
              ++ ++ GLC   ++  AL L+  M  +               G+TP     + LI  
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235

Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              EG +     L+ K + +   ++ +T    +I+  +   G    A NLL  M +    
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTY--GTIVNGMCKMGDTKSALNLLSKMEETH-- 291

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         + P+   +  II+ L KDG    A  LF EM + G   NVF YN +
Sbjct: 292 --------------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           IDG C+  R  ++  LLR+M E    P   T N++     +   +  A  L  +M  +  
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P       +I   CKH +  +A + + D++     PD+V ++  I      KRVD  ++
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQ 453

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L R+I   G   +   YN +I G C+   +  A+DLF EMI+ G+ P   T N+L+ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           ++  +++A L L  +++      D + Y  +I G+C   + D+A  L+  +   G  P+ 
Sbjct: 514 ENEKLEEA-LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            T+  +I+G C       A V F  MK+ G +PD   +  LI   L       + E++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 666 M 666
           M
Sbjct: 633 M 633



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 244/547 (44%), Gaps = 46/547 (8%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YS+N L++  C    +        ++   G+  D  T   LL   C   +  +AL++F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             +++ G+++                   A  L ++M +  +     TF  LI+G   + 
Sbjct: 200 GYMVETGFLE-------------------AVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           RV +A  L +KM   G   D   Y  I+ G+CK    + AL L S+M+ + I PD  I S
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300

Query: 245 KLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            +I     +G  +    L  E+ E + +       N ++    S G    A  LL+ MI+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E                ++P+  +F+ +I+  +K+GKL  A  L  EM       +   
Sbjct: 360 RE----------------INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++I G C  NR +++  +   M      P   T N++    CR + V   + L+R++ 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G          LI   C+      A     +M+  G  PD +  +  + G  + ++++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ALELF  I       D VAYNIII G+CK  +V EA DLF  +   G+ P V TYN++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G+C    I  A +   +M  K++G  PD  TY TLI G   AG  D +I L +EM   G
Sbjct: 580 SGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 601 CAPNRIT 607
            + +  T
Sbjct: 638 FSGDAFT 644



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 210/475 (44%), Gaps = 59/475 (12%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEI 242
           +D A+  FD M +S     A   + +IG   +  + ++A+ LY +M+   I  +   F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 243 LSKLITSC-------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           L K    C       S  G+LT L  +     DV T     N+++  L     I +A  L
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQ----PDVVTF----NTLLHGLCLEDRISEALAL 198

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              M++   +  V +   M+  G ++P   +F+ +IN L  +G++  A +L  +M   G 
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIG-LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  +++G+C     + +  LL +MEE+  KP                DVV    
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP----------------DVVIY-- 299

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                            + +I  LCK G   +A    ++M+++G  P++  Y+  I G  
Sbjct: 300 -----------------SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R   A  L RD+      PDV+ +N +IS   K  ++ EAE L +EM+ + + P   
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I G+CK    D A      M      SPDV+T+ T+ID  C A R D+ + L  E
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +  +G   N  T+  LI G C+ D   AA   F+ M   G+ PD      L+  F
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 179/394 (45%), Gaps = 36/394 (9%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S+D A +    M++  P           F   V  N      +I   ++  + D+A+SL+
Sbjct: 86  SLDDAIDFFDYMVRSRP-----------FYTAVDCNK-----VIGVFVRMNRPDVAISLY 129

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R+M       N++ +N LI   C+ ++L  S     ++ + GF+P   T N++   LC  
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189

Query: 408 QDVVGALNLVRKMRVQGH---------------EPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +  AL L   M   G                 P V     LI  LC  G+ +EA   +
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV +G   D+V Y   + G+  +     AL L   +      PDVV Y+ II  LCK 
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
              ++A+ LF+EM+ KG+ P+V TYN +I+G+C  G    A   L  M+E+E  +PDV+T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLT 368

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           +  LI      G+  +A  L +EM  +   P+ +T+ ++I G CK +R   A   F +M 
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                PD+  F  +I  +          ++L+E+
Sbjct: 429 ----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 168/369 (45%), Gaps = 24/369 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF ++  +G+  PN ++YNC+++  C        +  L++M +     D  T
Sbjct: 310 GHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+      G+  +A  + +E++    + D   ++ ++  F K    D A  + + M 
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             ++     TF  +I  + +  RVD+ +QL  ++++ G  ++   Y+ +I G C+   L 
Sbjct: 429 SPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIM 280
            A  L+ EM   G+ PD    + L+   C +E  E  L + E+ +   ++  T+  N I+
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             +     +D+A++L  ++    PI   GVE          P+  +++++I+       +
Sbjct: 545 HGMCKGSKVDEAWDLFCSL----PIH--GVE----------PDVQTYNVMISGFCGKSAI 588

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  LF +M   G   +   YN LI G   +  +++S EL+ EM  +GF    FT+   
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648

Query: 401 FRCLCRRQD 409
              +CR  D
Sbjct: 649 EEIICRVSD 657



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 171/365 (46%), Gaps = 25/365 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   Y+ +++ LCK       +    EM + G   + +T   ++  +C+ G++  A  +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             ++I+     D   F+ L+ A  K G++ +A +L + M    I  +  T+  +I+GF K
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            +R D A  +FD M     + D   ++ II   C+ K+++  +QL  E+   G+  +   
Sbjct: 414 HNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469

Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI    +   L    ++++++     V   T+ CN ++     N  +++A  L +  
Sbjct: 470 YNTLIHGFCEVDNLN-AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE-- 526

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                         +I    +  +T +++III+ + K  K+D A  LF  +   G   +V
Sbjct: 527 --------------VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +I G C  + + ++  L  +M+++G +P + T N++ R   +  ++  ++ L+ +
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 420 MRVQG 424
           MR  G
Sbjct: 633 MRSNG 637



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 16/264 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  +FD      +  P+  ++N +++  C++  VD     L+E+   G   +  T   
Sbjct: 418 DDAKHMFDL-----MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCN 165
           L+  +C     + A  +F E+I HG   + +  +ILL  F +  ++++A EL E +    
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I L+   + ++IHG  K S+VD+A  LF  +   G   D   Y+V+I G C    +  A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSI 279
            L+ +MK +G  PD    + LI  C   GE+   ++ I E R      D  T+ +    I
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652

Query: 280 MRILVSNGSIDQAYNLLQAMIKGE 303
            R  VS+  I + Y  L+  I GE
Sbjct: 653 CR--VSDEEIIENY--LRPKINGE 672


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 242/517 (46%), Gaps = 50/517 (9%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ L+    K G++D A  L+++M D     N  T+  LI G  K  R   A+Q   +M
Sbjct: 12  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT-SCSDEGE 255
            +SG   D   Y+ +I GLC   +++ A  +  E+  +G  P+    S L+  +C     
Sbjct: 72  LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR--- 128

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI-ADVGVEMLM 314
                + + + R +    +L  S+  ++V    ID  +   +A  +        G EM  
Sbjct: 129 -----RRLDQARGLIREMILRGSVCNLVVY---IDCIFGFCEARCQSSRYECRDGDEM-- 178

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           I  G + P+  +++  I+ L K GKLD  L +  EM + G   +V  + ++I GLC +NR
Sbjct: 179 IESGRI-PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +++++++ + M E G  P   T + M              NL R  R+            
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLD------------NLSRANRLD----------- 274

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            + E+ +H +AM+A          G + ++  ++A IG L    +  LA  +   +   G
Sbjct: 275 TVDEVLEHMQAMKA----------GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 324

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-PSVATYNLLINGWCKSGNIDQA 553
             P++++YN +I GLCK+  V +A  L  +M+  G   P V  +N LI+G+CK+G + QA
Sbjct: 325 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 384

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L  M  K    PDV+TY TLIDG    G    A +L  EM+  GC PN +T+ ALI 
Sbjct: 385 HQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALIN 444

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G  K      A   F  M  KG  PD+  +  ++SAF
Sbjct: 445 GYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 174/657 (26%), Positives = 277/657 (42%), Gaps = 98/657 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G ++ A  L  ++   G C PN  +Y  L++ LCK+         +K M   
Sbjct: 16  LIDGLCKSGDLDAAQALLQKMADAG-CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRS 74

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   L+   C + + D A  V  E++ +G+   H+ +S L++   +   +D+A
Sbjct: 75  GCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQA 134

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFV----KKSRVDKALQLFDKMTKSGFASDAAMYDV 210
             LI  M       N   +   I GF     + SR +   +  D+M +SG   D   Y+ 
Sbjct: 135 RGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYE--CRDGDEMIESGRIPDVVTYNT 192

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
            I GLCK  +L+  L++  EM   GI PD      ++T CS                   
Sbjct: 193 FISGLCKAGKLDKGLEMLEEMDRGGIPPD------VVTFCS------------------- 227

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                   I+  L     ID A+ + + M++               +G V P++ ++ I+
Sbjct: 228 --------IISGLCKANRIDDAFQVFKGMLE---------------RGCV-PDSLTYSIM 263

Query: 331 INTLLKDGKLDLALSLFREMT--QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++ L +  +LD    +   M   + GC+  V+ +N  I  LC S +   +  +L  M ES
Sbjct: 264 LDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIES 323

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAME 447
           G  P   + N +   LC+  +V  A  L RKM   G  +P V     LI   CK G+  +
Sbjct: 324 GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQ 383

Query: 448 AFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           A + L +M  +   +PD+V Y+  I G      +  A  L +++ A GC P+VV Y  +I
Sbjct: 384 AHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALI 443

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G  K     EAE LF+EM  KG  P + TYN +++ + K+G + +A     ++  K S 
Sbjct: 444 NGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSY 503

Query: 567 -SPDVITYTTLIDGLCIAGR------------------------------------PDDA 589
            SPD ITY  LIDG C A                                      P  A
Sbjct: 504 CSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKA 563

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           + ++ +M ++ C P+   F +L+    +     +A    + M EKG   D     AL
Sbjct: 564 LAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEAL 620



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 162/323 (50%), Gaps = 9/323 (2%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +V  Y  LIDGLC S  L+ +  LL++M ++G  P   T  ++   LC+ + 
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              A+  V++M   G EP +     LI  LC   +  +A   L ++V+ GF P+ + YS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ---RVAEAEDLFNEMI 526
            +      +R+D A  L R++   G   ++V Y   I G C+A+      E  D  +EMI
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD-GDEMI 179

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G IP V TYN  I+G CK+G +D+ +  L  M ++    PDV+T+ ++I GLC A R 
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM-DRGGIPPDVVTFCSIISGLCKANRI 238

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA---ALVHFRMMKEKGMKPDMFVF 643
           DDA  ++  M E+GC P+ +T+  ++  L + +R       L H + MK  G   +++  
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMK-AGCVMEVYTH 297

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
            A I A       PLA  +L  M
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGM 320



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 7/197 (3%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           ++L Q++    C  +      LI      G+ EEA  LFD++  +G C P+  +YN +L 
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKG-CFPDIITYNTVLS 479

Query: 75  ALCKS---CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           A  K+      + V  +LK    Y    D  T   L+  YC +   ++ L++  E+   G
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSY-CSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG 538

Query: 132 W-VDEHVFSILLVAFSKWGEV-DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           W  D + +++L+   ++  EV  KA  + ++M D +   +   F  L+  F++   V+ A
Sbjct: 539 WSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSA 598

Query: 190 LQLFDKMTKSGFASDAA 206
             +  +M + G   DA+
Sbjct: 599 RSMVQEMNEKGHLVDAS 615


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 6/347 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++P  S ++  ++ L K GK+  A+ + + M    C  +V  +N LI GLC + RL+E+ 
Sbjct: 50  MAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQ 109

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++L EME SGF     T N++   L        A+ +++ M      P  +    +I   
Sbjct: 110 QVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGF 166

Query: 440 CKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRD-ICAHGCCP 497
           CK G+   A+ FL +M Q  G  PD   YS  I GL     +  A EL ++ I    CC 
Sbjct: 167 CKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCA 226

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VVA+N ++ G CKAQ +  A +L + M+  G  P V TY+ +I+G C+ G++D+    L
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M+ +    PDV+TYT L+ GLC AG+  +A  L   M E GC PN +T+  +  GLCK
Sbjct: 287 EKMVSR-GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            D+   A      +++KG   D+  F AL+ +    L    AF+  K
Sbjct: 346 IDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRAAFQKWK 392



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 194/411 (47%), Gaps = 54/411 (13%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACE 156
           +D YT   L++ +C +G+   A+ +  E+     +     +++  + A  K G+V +A E
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +++ M D   + +  TF  LI G  K  R+D+A Q+ D+M +SGFA++   Y+ +I GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL- 134

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
                                          +S    GE  L+++ +    D  T     
Sbjct: 135 -------------------------------SSAGRSGEAVLVMQGMTTTPDTQTY---- 159

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+I+     +G ID+AY  L+ M +               +   SP+T ++ I+IN L K
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQ---------------RAGCSPDTFTYSILINGLCK 204

Query: 337 DGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
              L  A  L +EM  +  C  +V  +N L+DG C +  L+ + ELL  M E G  P   
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   LCR  DV     L+ KM  +G +P V   T+L+  LCK GK +EA R +  M
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +++G  P+ V YS    GL  I ++D+A +L   I   G   DVVA+  ++
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 5/293 (1%)

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           + Y  L+   C +  L+ + +LLREME+  G  PT    N     LC+   V  A+ +V+
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M+    +P V     LI  LCK G+  EA + L +M + GF  ++V Y+  I GL    
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATY 537
           R   A+ + + +      PD   YN II G CK+  +  A     EM  + G  P   TY
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++LING CKS N+ +A   L  M+ ++     V+ + TL+DG C A   D A  L + M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           E GCAP+ +T+  +I GLC+C            M  +G KPD+  +  L++  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 179/410 (43%), Gaps = 58/410 (14%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           T+ VL+        +  A+ L  +M +  G A   +MY+  +  LCK+ ++  A+++   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           MK     PD    + LI                           LC +        G +D
Sbjct: 80  MKDGACKPDVVTFNTLIAG-------------------------LCKA--------GRLD 106

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +L  M                 +   + N  +++ +IN L   G+   A+ + + M
Sbjct: 107 EAQQVLDEM----------------ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE-SGFKPTHFTLNSMFRCLCRRQD 409
           T     Q    YN +I G C S  ++ +Y  L EM++ +G  P  FT + +   LC+  +
Sbjct: 151 TTTPDTQT---YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 410 VVGALNLVRKM--RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +  A  L+++M  R       V  NTL +   CK      A   L+ M++ G  PD+V Y
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTL-VDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  I GL     VD    L   + + GC PDVV Y ++++GLCKA ++ EA  L   M+ 
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
            G  P+  TY+L+ +G CK   +D A   L+ + +K   + DV+ +  L+
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRIT-DVVAFEALL 375



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 177/410 (43%), Gaps = 58/410 (14%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +NY+Y  L+ A                                   +C +G+   A+ + 
Sbjct: 17  DNYTYFVLVRA-----------------------------------HCLAGELQAAMDLL 41

Query: 125 NEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            E+     +     +++  + A  K G+V +A E+++ M D   + +  TF  LI G  K
Sbjct: 42  REMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCK 101

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+D+A Q+ D+M +SGFA++   Y+ +I GL    +   A+ +   M+G   TPD + 
Sbjct: 102 AGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTTPDTQT 158

Query: 243 LSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + +I      GE+      ++E+ +    +  T   + ++  L  + ++ +A  LLQ M
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I                +     +  +F+ +++   K   LD A  L   M + GC  +V
Sbjct: 219 IG---------------RKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ +IDGLC    +++ + LL +M   G KP   T   +   LC+   +V A  LV++
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           M   G  P     +L+   LCK  K   A   LT +  +G + D+V + A
Sbjct: 324 MLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 168/392 (42%), Gaps = 53/392 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R     G ++ A  L  +++++    P    YN  + ALCKS  V      +K M+D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D  T   L+   C +G+ D+A  V +E+   G+    V ++ L+   S  G   +A
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIG 213
             +++ M       + +T+  +IHGF K   +D+A    ++M  ++G + D   Y ++I 
Sbjct: 144 VLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK+  L  A +L  EM G                                 +D     
Sbjct: 201 GLCKSSNLRKADELLQEMIGR--------------------------------KDCCASV 228

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N+++        +D+A  LL +M+                +   +P+  ++  II+ 
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSML----------------EHGCAPDVVTYSTIIDG 272

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L + G +D   +L  +M   GC  +V  Y  L+ GLC + ++ E+  L++ M E G  P 
Sbjct: 273 LCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPN 332

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
             T + +F  LC+   +  A +L+  +R +G 
Sbjct: 333 AVTYSLVFDGLCKIDKLDMANDLLTSIRDKGR 364



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEK-GCAPNRITFMALITGLCKCDRPRAALVH 627
           D  TY  L+   C+AG    A+ L  EME++ G AP    +   +  LCK  +   A+  
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + MK+   KPD+  F  LI+          A +VL EM
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM 115


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 241/541 (44%), Gaps = 42/541 (7%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F +    D A  L  +M+   I LN  +F +LI  F    ++  +L  F K+TK GF  D
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGS---------------GITPDFEILSKLITS 249
              ++ ++ GLC   ++  AL L+  M  +               G+TP     + LI  
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235

Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
              EG +     L+ K + +   ++ +T    +I+  +   G    A NLL  M +    
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTY--GTIVNGMCKMGDTKSALNLLSKMEETH-- 291

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         + P+   +  II+ L KDG    A  LF EM + G   NVF YN +
Sbjct: 292 --------------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           IDG C+  R  ++  LLR+M E    P   T N++     +   +  A  L  +M  +  
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P       +I   CKH +  +A + + D++     PD+V ++  I      KRVD  ++
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQ 453

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L R+I   G   +   YN +I G C+   +  A+DLF EMI+ G+ P   T N+L+ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           ++  +++A L L  +++      D + Y  +I G+C   + D+A  L+  +   G  P+ 
Sbjct: 514 ENEKLEEA-LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            T+  +I+G C       A V F  MK+ G +PD   +  LI   L       + E++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632

Query: 666 M 666
           M
Sbjct: 633 M 633



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 244/547 (44%), Gaps = 46/547 (8%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N YS+N L++  C    +        ++   G+  D  T   LL   C   +  +AL++F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             +++ G+++                   A  L ++M +  +     TF  LI+G   + 
Sbjct: 200 GYMVETGFLE-------------------AVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           RV +A  L +KM   G   D   Y  I+ G+CK    + AL L S+M+ + I PD  I S
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300

Query: 245 KLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            +I     +G  +    L  E+ E + +       N ++    S G    A  LL+ MI+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            E                ++P+  +F+ +I+  +K+GKL  A  L  EM       +   
Sbjct: 360 RE----------------INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN++I G C  NR +++  +   M      P   T N++    CR + V   + L+R++ 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G          LI   C+      A     +M+  G  PD +  +  + G  + ++++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ALELF  I       D VAYNIII G+CK  +V EA DLF  +   G+ P V TYN++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G+C    I  A +   +M  K++G  PD  TY TLI G   AG  D +I L +EM   G
Sbjct: 580 SGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637

Query: 601 CAPNRIT 607
            + +  T
Sbjct: 638 FSGDAFT 644



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 210/475 (44%), Gaps = 59/475 (12%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEI 242
           +D A+  FD M +S     A   + +IG   +  + ++A+ LY +M+   I  +   F I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 243 LSKLITSC-------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           L K    C       S  G+LT    ++    DV T     N+++  L     I +A  L
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLT----KLGFQPDVVTF----NTLLHGLCLEDRISEALAL 198

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              M++   +  V +   M+  G ++P   +F+ +IN L  +G++  A +L  +M   G 
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIG-LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  +++G+C     + +  LL +MEE+  KP                DVV    
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP----------------DVVIY-- 299

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                            + +I  LCK G   +A    ++M+++G  P++  Y+  I G  
Sbjct: 300 -----------------SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R   A  L RD+      PDV+ +N +IS   K  ++ EAE L +EM+ + + P   
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN +I G+CK    D A      M      SPDV+T+ T+ID  C A R D+ + L  E
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +  +G   N  T+  LI G C+ D   AA   F+ M   G+ PD      L+  F
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 179/394 (45%), Gaps = 36/394 (9%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           S+D A +    M++  P           F   V  N      +I   ++  + D+A+SL+
Sbjct: 86  SLDDAIDFFDYMVRSRP-----------FYTAVDCNK-----VIGVFVRMNRPDVAISLY 129

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R+M       N++ +N LI   C+ ++L  S     ++ + GF+P   T N++   LC  
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189

Query: 408 QDVVGALNLVRKMRVQGH---------------EPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +  AL L   M   G                 P V     LI  LC  G+ +EA   +
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV +G   D+V Y   + G+  +     AL L   +      PDVV Y+ II  LCK 
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
              ++A+ LF+EM+ KG+ P+V TYN +I+G+C  G    A   L  M+E+E  +PDV+T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLT 368

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           +  LI      G+  +A  L +EM  +   P+ +T+ ++I G CK +R   A   F +M 
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                PD+  F  +I  +          ++L+E+
Sbjct: 429 ----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G   +A  LF ++  +G+  PN ++YNC+++  C        +  L++M +     D  T
Sbjct: 310 GHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+      G+  +A  + +E++    + D   ++ ++  F K    D A  + + M 
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             ++     TF  +I  + +  RVD+ +QL  ++++ G  ++   Y+ +I G C+   L 
Sbjct: 429 SPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  L+ EM   G+ PD                                 T+ CN ++  
Sbjct: 485 AAQDLFQEMISHGVCPD---------------------------------TITCNILLYG 511

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              N  +++A  L +                +I    +  +T +++III+ + K  K+D 
Sbjct: 512 FCENEKLEEALELFE----------------VIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LF  +   G   +V  YN +I G C  + + ++  L  +M+++G +P + T N++ R
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 403 CLCRRQDVVGALNLVRKMRVQG 424
              +  ++  ++ L+ +MR  G
Sbjct: 616 GCLKAGEIDKSIELISEMRSNG 637



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 14/251 (5%)

Query: 53  FDQVKR--EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           FD  K   + +  P+  ++N +++  C++  VD     L+E+   G   +  T   L+  
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           +C     + A  +F E+I HG   + +  +ILL  F +  ++++A EL E +    I L+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              + ++IHG  K S+VD+A  LF  +   G   D   Y+V+I G C    +  A  L+ 
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRIL 283
           +MK +G  PD    + LI  C   GE+   ++ I E R      D  T+ ++ +     L
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-----L 651

Query: 284 VSNGSIDQAYN 294
           +++G +D++++
Sbjct: 652 ITDGRLDKSFS 662


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 261/577 (45%), Gaps = 30/577 (5%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMR 88
           P       + L   GL+ EA  +F+++   GL +  + S N  L  L K C       + 
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD-SCNVYLTRLSKDCYKTATAIIV 233

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            +E  + G  ++  +   ++   C  G+  +A  +   +   G+  + + +S ++  + +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           +GE+DK  +LIE M    ++ N   +  +I    +  ++ +A + F +M + G   D  +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
           Y  +I G CK   +  A + + EM    ITPD    + +I+     G++    K   E  
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413

Query: 266 ----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
               + D  T T L N   +     G +  A+ +   MI+                   S
Sbjct: 414 CKGLEPDSVTFTELINGYCKA----GHMKDAFRVHNHMIQA----------------GCS 453

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++  +I+ L K+G LD A  L  EM +IG   N+F YN++++GLC S  +EE+ +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           + E E +G      T  ++    C+  ++  A  ++++M  +G +P +    +L+   C 
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           HG   +  + L  M+ +G  P+   +++ +        +  A  +++D+C+ G  PD   
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  ++ G CKA+ + EA  LF EM  KG   SV+TY++LI G+ K     +A     +M 
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM- 692

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +E  + D   +    D      RPD  +   +E+ E
Sbjct: 693 RREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 243/573 (42%), Gaps = 89/573 (15%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           WG D        QV  + G   +A  VF +++++G                         
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG------------------------- 205

Query: 157 LIERMDDCNI---RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           L+  +D CN+   RL++  +           +   A+ +F +  + G   + A Y+++I 
Sbjct: 206 LVLSVDSCNVYLTRLSKDCY-----------KTATAIIVFREFPEVGVCWNVASYNIVIH 254

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            +C+  +++ A  L   M+  G TPD                             V + +
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPD-----------------------------VISYS 285

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
            + N   R     G +D+ + L++ M +               KG + PN+  +  II  
Sbjct: 286 TVVNGYCRF----GELDKVWKLIEVMKR---------------KG-LKPNSYIYGSIIGL 325

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L +  KL  A   F EM + G + +  +Y  LIDG C    +  + +   EM      P 
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T  ++    C+  D+V A  L  +M  +G EP     T LI   CK G   +AFR   
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+Q G  P++V Y+  I GL     +D A EL  ++   G  P++  YN I++GLCK+ 
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + EA  L  E    GL     TY  L++ +CKSG +D+A   L  ML K    P ++T+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTF 564

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             L++G C+ G  +D   L N M  KG APN  TF +L+   C  +  +AA   ++ M  
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G+ PD   +  L+       N   A+ + +EM
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 229/506 (45%), Gaps = 24/506 (4%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
            +   +I  +  +G ++EA+ L   ++ +G   P+  SY+ ++   C+   +D V   ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-TPDVISYSTVVNGYCRFGELDKVWKLIE 305

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
            M+  G   + Y    ++ + C   +  +A   F+E+I  G + D  V++ L+  F K G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++  A +    M   +I  +  T+  +I GF +   + +A +LF +M   G   D+  + 
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWE- 265
            +I G CK   ++ A ++++ M  +G +P+    + LI     EG+L     L+ E+W+ 
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
               N  T   NSI+  L  +G+I++A  L+     GE  A             ++ +T 
Sbjct: 486 GLQPNIFTY--NSIVNGLCKSGNIEEAVKLV-----GEFEA-----------AGLNADTV 527

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +++   K G++D A  + +EM   G    +  +N L++G C    LE+  +LL  M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P   T NS+ +  C R ++  A  + + M  +G  P  K    L+K  CK    
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA+    +M  +GF   +  YS  I G +  K+   A E+F  +   G   D   ++  
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLI 531
                K +R     D  +E+I   L+
Sbjct: 708 SDTKYKGKRPDTIVDPIDEIIENYLV 733


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 219/463 (47%), Gaps = 23/463 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
           ++ I+  L  NK     + L+ + + +GITPD   LS LI     +  +TL         
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQA-YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            R  +   +  N++++ L   G I +A Y   Q + +G  +  V                
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQV---------------- 163

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+  +IN L K G+      L R++       +V +YN +I+ LC +  L ++ ++  E
Sbjct: 164 -SYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSE 222

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G  P   T  ++    C    +  A +L+ +M+++   P V    +LI  L K GK
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L  M++    PD+  Y++ I G   +  V  A  +F  +   G  PDV  Y  
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+GLCK + V EA  LF EM  K +IP + TYN LI+G CK+ ++++A+    RM  KE
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM--KE 400

Query: 565 SG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            G  PDV +YT L+DGLC +GR +DA  ++  +  KG   N   +  LI  LCK      
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDE 460

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           AL     M++KG  PD   F  +I A   +     A ++L+EM
Sbjct: 461 ALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 213/471 (45%), Gaps = 19/471 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + +N +L +L  +     V    K+ +  G   D  TL+ L+  +C+      A SV
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F  I+  G+    +  + L+      GE+ KA    +++     +L++ ++  LI+G  K
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                   +L  K+       D  MY+ II  LCKNK L  A  +YSEM   GI+PD   
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAMI 300
            + LI      G L      + E +  N    +C  N ++  L   G + +A  LL  M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           K                  + P+  +++ +I+      ++  A  +F  M Q G   +V 
Sbjct: 295 KA----------------CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQ 338

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y N+I+GLC +  ++E+  L  EM+     P   T NS+   LC+   +  A+ L ++M
Sbjct: 339 CYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM 398

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           + QG +P V   T+L+  LCK G+  +A      ++ +G+  ++  Y+  I  L      
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           D AL+L   +   GC PD V ++III  L +     +AE +  EMI +GL+
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 150/339 (44%), Gaps = 34/339 (10%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A++ F  M  +      F +NN++  L N+        L ++ E +G  P   TL+ +  
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           C C +  +  A ++   +  +G  P       LIK LC  G+  +A  F   +V +GF  
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V Y   I GL           L R +  H   PDVV YN II+ LCK + + +A D++
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------------LEKE 564
           +EMI KG+ P V TY  LI+G+C  G++ +A   L+ M                  L KE
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 565 SG----------------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                              PDV TY +LIDG  +      A  ++  M ++G  P+   +
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             +I GLCK      A+  F  MK K M PD+  + +LI
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 379



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 121/260 (46%), Gaps = 1/260 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  F  N++   L   +     ++L ++    G  P +   ++LI   C       AF  
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             ++++ GF P+ +  +  I GL     +  AL     + A G   D V+Y  +I+GLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
                    L  ++    + P V  YN +IN  CK+  +  A    S M+ K   SPDV+
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK-GISPDVV 233

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TYTTLI G CI G   +A  L NEM+ K   PN  TF  LI  L K  + + A +   +M
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 632 KEKGMKPDMFVFVALISAFL 651
            +  +KPD+F + +LI  + 
Sbjct: 294 MKACIKPDVFTYNSLIDGYF 313


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 169/668 (25%), Positives = 290/668 (43%), Gaps = 50/668 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    + GLV +   L+ ++   G+ +PN +++N L+ A CK   + L    L  +++ 
Sbjct: 17  LIYQFNATGLVSQVWDLYSEMLSCGV-LPNVFTHNILVHAWCKMGHLSLA---LDLIRNV 72

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               D  T    +  +C  G  ++     + ++    + D    +IL+  F + G V   
Sbjct: 73  DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYG 132

Query: 155 ----CELIERMDD----CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
                 LI+ M+D     N+  N  T+  LI  + K+  + +AL L+++M   GF  D  
Sbjct: 133 EWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVV 192

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y  II GLCK   L  A  L  EM   G+ P+  + + L+ S    G         WE 
Sbjct: 193 TYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG-------SAWES 245

Query: 267 RDVNTMTL---------LCNSIMRILVSNGSIDQAYNLL---------------QAMIKG 302
               +  +         +C +++  L   G  D+A  +                 AMI G
Sbjct: 246 FIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDG 305

Query: 303 E-PIADV-GVEMLM--IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
              + D+ G E L+  + K  V PN  ++  IIN   K G LD+A+ + ++M     M N
Sbjct: 306 YCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPN 365

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
            ++Y  LIDG   + + + + +L  EM+ +G +   F +++    L R + +  A  L +
Sbjct: 366 AYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCK 425

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M  +G      + T L+    K G+   AF     M + G   D+V Y+  I GL+ + 
Sbjct: 426 YMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLG 485

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           + D A  ++  I   G  PD   YN +I+  CK  ++  A  L+NEM    ++P+  T N
Sbjct: 486 KYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCN 544

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           +L+ G  K+G  ++A+  L+ ML      P+V  +  L++      R D  + +   +  
Sbjct: 545 ILVGGLSKAGETERAIDVLNEML-LWGICPNVTIHRALLNACSKCERADTILQMHKRLVG 603

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G   NR  + +LIT LC     + A +    M ++G+  D   + ALI       +   
Sbjct: 604 MGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEK 663

Query: 659 AFEVLKEM 666
           A     +M
Sbjct: 664 ALATYTQM 671



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 291/640 (45%), Gaps = 43/640 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G++ EA  L  ++ + G+  PN+  Y  L+++L K+ S     +   +M   
Sbjct: 197 IINGLCKRGMLTEAKALLREMDKMGVN-PNHVVYAILVDSLFKAGSAWESFIYQSQMIVC 255

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G  +D    T L+     +G+ D+A ++F  +     +  ++ ++ ++  + K G++D A
Sbjct: 256 GVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGA 315

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M+   +  N  T+  +I+G+ KK  +D A+++  KM       +A +Y  +I G
Sbjct: 316 ESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDG 375

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS-----DEGE---LTLLVKEIWED 266
             K  + + A+ LY+EMK +G+  +  I+   I +       +E E     ++ K +  D
Sbjct: 376 HLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLD 435

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA-DVGVEMLM---------IF 316
           R VN  +L+ +   +    + +   A  + +  IK + +A +V +  L+         ++
Sbjct: 436 R-VNYTSLM-DGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVY 493

Query: 317 KGT----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            G     ++P+ ++++ +IN   K GKL+ A+ L+ EM     M N    N L+ GL  +
Sbjct: 494 SGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKA 553

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCL--CRRQDVVGALNLVRKMRVQGHEPWVK 430
              E + ++L EM   G  P      ++      C R D +  L + +++   G +   +
Sbjct: 554 GETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTI--LQMHKRLVGMGLKANRE 611

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI  LC  G    A   L +M +EG   D V Y+A I G      ++ AL  +  +
Sbjct: 612 VYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQM 671

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  P +  YN+++ GL  A  +++A ++ ++M   GL P  + YN LI+G  K GN 
Sbjct: 672 LNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNK 731

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A+     M+ K    P   TY  LI+     G+ D A  L NEM+ +   PN  T+  
Sbjct: 732 KEAIKFYCEMVTK-GLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDI 790

Query: 611 LITGLCKCDRP------------RAALVHFRMMKEKGMKP 638
           LI G C   +               A   F  M EKG  P
Sbjct: 791 LICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           I  H   P +  +N +I        V++  DL++EM++ G++P+V T+N+L++ WCK G+
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +  A L L R ++ +    D +TY T I G C  G  +      + M +K    +  T  
Sbjct: 62  LSLA-LDLIRNVDIDV---DTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCN 117

Query: 610 ALITGLCKCDRPR-AALVHFRMMKE-------KGMKPDMFVFVALISAFLSELNPPLAFE 661
            L+ G C+    +    V   ++ +         ++P++  +  LISA+  +     A  
Sbjct: 118 ILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALS 177

Query: 662 VLKEM 666
           + +EM
Sbjct: 178 LYEEM 182


>gi|359490245|ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 254/592 (42%), Gaps = 61/592 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V+EA  +FD ++         + Y  L   LC+   V+  E+ + EM+  
Sbjct: 204 LIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESE 263

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   DK   T L+  YC   +   A+ VF  ++  G   D + ++ L+  F K G  DK 
Sbjct: 264 GHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKG 323

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L  +M +  ++ N  T+ ++I  + ++ +VD AL L   M+          Y V+I  
Sbjct: 324 WILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITA 383

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L K  +L    +LY +M   G+ PD  +   L+       EL L +K             
Sbjct: 384 LYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALK------------- 430

Query: 275 LCNSIMRILVSNG-SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS----SFDI 329
               I++ +  NG ++D    LL       P  DV  E+  +    V  N +    +F I
Sbjct: 431 ----ILQAIAKNGCNLDLC--LLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGI 484

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            I+ L   GK D AL    +M  +GC                                  
Sbjct: 485 FISALCAAGKTDAALLFMDKMVSLGC---------------------------------- 510

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P   T NS+ +CL + + V  A +L+  M+  G  P +    +++ E C HG    AF
Sbjct: 511 -RPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAF 569

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             L  M + G  P +  Y + IG L   KR+  A  +F+ +   G  PD + Y  +ISG 
Sbjct: 570 GLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGY 629

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            K +R  EA  LF++MI  G  PS  +Y  +I+G  K   ID+    LS ML K+   P+
Sbjct: 630 SKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDML-KDGFVPN 688

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            + YT+LI+     G  + A  L + M+      + IT +AL++G+ +   P
Sbjct: 689 TVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITP 740



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 153/608 (25%), Positives = 265/608 (43%), Gaps = 60/608 (9%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELI 158
           D  TL  ++  YCN G+ ++A++ F+ + +   +  +   + +L        V +A +  
Sbjct: 127 DSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYF 186

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCK 217
            R++D  I +    F  LI G   K  VD+A  +FD M  ++G  +   +Y  +  GLC+
Sbjct: 187 VRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCR 246

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELT---LLVKEIWEDRDVNTMT 273
            +++E A     EM+  G   D  + + LI   C  +   T   + ++ +    D +T T
Sbjct: 247 QERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYT 306

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N+++   V  G  D+ + L   M      ++ G++          PN  ++ I+I  
Sbjct: 307 Y--NTLIHGFVKLGLFDKGWILHNQM------SEWGLQ----------PNVVTYHIMIRR 348

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             ++GK+D AL+L   M+      +V  Y  LI  L   NRL E  EL ++M + G  P 
Sbjct: 349 YCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPD 408

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-------------HEPW------------ 428
           H    ++ +   +  ++  AL +++ +   G             H P             
Sbjct: 409 HVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLG 468

Query: 429 --VKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             V+ N         + I  LC  GK   A  F+  MV  G  P +  Y++ I  L   +
Sbjct: 469 EIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQER 528

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            V+ A  L   +  +G  PD+  Y I++   C    +A A  L ++M  +GL PSVA Y+
Sbjct: 529 LVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYD 588

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +I    +   I +A      MLE     PD I Y T+I G     R  +A  L+++M E
Sbjct: 589 SIIGCLSRRKRILEAENVFKMMLEA-GVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIE 647

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G  P+  ++ A+I+GL K +       +   M + G  P+  ++ +LI+ FL +     
Sbjct: 648 HGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEF 707

Query: 659 AFEVLKEM 666
           AF ++  M
Sbjct: 708 AFRLVDLM 715



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 154/694 (22%), Positives = 275/694 (39%), Gaps = 94/694 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +GL ++  +L +Q+   GL  PN  +Y+ ++   C+   VD     L  M  +
Sbjct: 310 LIHGFVKLGLFDKGWILHNQMSEWGL-QPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSF 368

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
                 ++ T L+       +  +   ++ +++D G V +HV F  L+    K  E+  A
Sbjct: 369 NLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLA 428

Query: 155 CELIE-------RMDDC----------------------------NIRLNEKTFCVLIHG 179
            ++++        +D C                            N  L +  F + I  
Sbjct: 429 LKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISA 488

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                + D AL   DKM   G     + Y+ +I  L + + +E A  L   M+ +GI PD
Sbjct: 489 LCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPD 548

Query: 240 FEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
                 ++    + G+L     + +   +R +     + +SI+  L     I +A N+ +
Sbjct: 549 LATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFK 608

Query: 298 AMIKG--EPIADVGVEML------------------MIFKGTVSPNTSSFDIIINTLLKD 337
            M++   +P A + V M+                  MI  G   P++ S+  +I+ L+K+
Sbjct: 609 MMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHG-FQPSSHSYTAVISGLVKE 667

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +D   S   +M + G + N  LY +LI+       LE ++ L+  M+ +  +      
Sbjct: 668 NMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIE------ 721

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH--------------- 442
             M  C+     V   +  VR+         VK  +  ++E+  H               
Sbjct: 722 CDMITCIALVSGVSRNITPVRRRWYH-----VKSGSARVREILLHLLHQSFVIPRENNLS 776

Query: 443 ---GKAMEAFRFLTDMVQE----GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
              G   +   F  +++Q+     F+P++  Y+  I G      +  A   F  +   G 
Sbjct: 777 FPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGV 836

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           CP+ V + I+I+G  +   +  A  LFN+M   GL P   TYN LI G CK+G +  A L
Sbjct: 837 CPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDA-L 895

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            +S  + K    P+  +Y  L+  LC +     A  ++ EM      P       L+  L
Sbjct: 896 SVSHTMHKRGLFPNKSSYEKLLKCLCASHLGVHAFKIFEEMLSHDYVPCWYNCNWLLCIL 955

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           C+  R   A + F +M ++   PD      L+ A
Sbjct: 956 CEEHRWHEAHIVFDVMLKQRKYPDELTKRLLVEA 989



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 159/382 (41%), Gaps = 39/382 (10%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEP-IADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           LC ++   L+  G +     +++ MIK  P ++D  + +       +  ++  + +++  
Sbjct: 42  LCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDSCGYGVLLRK 101

Query: 334 LLKDGKLDLALSLFRE-MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           L+  G+   A +++R+ +   G + +    N+++   CN  +LEE+      + E    P
Sbjct: 102 LVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFP 161

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                N+M R LC R+ V                                   +EAF + 
Sbjct: 162 CKPACNAMLRELCARERV-----------------------------------LEAFDYF 186

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA-YNIIISGLCK 511
             +   G L  + C++  I GL D   VD A  +F  +      P  +  Y  +  GLC+
Sbjct: 187 VRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCR 246

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            +RV EAE    EM ++G       Y  LI+G+C+   +  AM    RML K    PD  
Sbjct: 247 QERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRML-KMGCDPDTY 305

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY TLI G    G  D   +L N+M E G  PN +T+  +I   C+  +   AL     M
Sbjct: 306 TYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSM 365

Query: 632 KEKGMKPDMFVFVALISAFLSE 653
               + P +  +  LI+A   E
Sbjct: 366 SSFNLTPSVHSYTVLITALYKE 387


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 249/551 (45%), Gaps = 53/551 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           D+  SV+ E++D   V  ++F++  ++  + K G V +A   + ++    + L+  T+  
Sbjct: 186 DEMKSVYLEMLD-DMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI G+ +   VD A  +F  M   G   +   Y  +I G C+ ++++ AL+L+S+M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             P                              V T T++  ++ ++    G   +A N+
Sbjct: 305 CWPT-----------------------------VRTYTVIIFALCQL----GRKTEALNM 331

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + M +                    PN  ++ ++I +L +D   D A  +   M + G 
Sbjct: 332 FKEMTEKH----------------CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGL 375

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +V  YN LIDG C       + E+L  ME +   P   T N +    CR +++  A++
Sbjct: 376 IPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMS 435

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+ KM  +  +P V    +LI   CK G    A++ L+ M + G +PD   YS  I  L 
Sbjct: 436 LLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               V+ A  LF  +   G   + V Y+ +I G CK  +V++   L ++M++ G +P+  
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN LI+G+CK  N  +A L +  M++++   P   TYT LID L      D A  ++++
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDI-EPAADTYTILIDNLLKDDEFDQAHDMFDQ 614

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M   G  P+   + A I   C   R + A V    M  KG+ PD  ++   I A+    +
Sbjct: 615 MLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGS 674

Query: 656 PPLAFEVLKEM 666
              AF +LK M
Sbjct: 675 IDGAFGILKRM 685



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 276/640 (43%), Gaps = 91/640 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +G V EA +   ++ + GL + + ++Y  L+   C++ +VD        M + G   ++ 
Sbjct: 217 LGNVVEAELYVSKIVQAGLSL-DTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEV 275

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           + T L+  +C + + D+AL +F+++  D+ W     +++++ A  + G   +A  + + M
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            + + + N  T+ VLI    + S  D A ++ + M + G       Y+ +I G CK    
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITS-CSDEG---ELTLLVKEIWEDRDVNTMTLLCN 277
             AL++ S M+ +  +P+    ++LI   C  +     ++LL K +      N +T   N
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTY--N 453

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++      G +  AY LL                LM   G V P+  ++ + I+TL K 
Sbjct: 454 ILIHGQCKEGDLGSAYKLLS---------------LMNESGLV-PDEWTYSVFIDTLCKR 497

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G ++ A SLF  + + G   N  +Y+ LIDG C   ++ +   LL +M  +G  P   T 
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITY 557

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           NS+    C+ ++   A  LV  M  +  EP     T+LI  L K  +  +A      M+ 
Sbjct: 558 NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLS 617

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  PD+  Y+A I                   C+HG                   R+ +
Sbjct: 618 TGSHPDVFIYTAFIHAY----------------CSHG-------------------RLKD 642

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           AE L  +M  KG++P    Y L I+ + + G+ID A   L RM E     P   TY+ LI
Sbjct: 643 AEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEV-GCEPSYYTYSCLI 701

Query: 578 DGLCIAGRPDD------------------------------AIMLWNEMEEKGCAPNRIT 607
             L  A +P +                               + L+ +M E GCAPN  T
Sbjct: 702 KHLSNA-KPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANT 760

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +   ITGLCK      A   F  MKEKG  P+  ++ +L+
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 164/651 (25%), Positives = 268/651 (41%), Gaps = 72/651 (11%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           ARR+     L   + +  C+ +      +I  L  +G   EA  +F ++  E  C PN +
Sbjct: 287 ARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT-EKHCQPNVH 345

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  L+ +LC+  + D  +  L  M + G      T   L+  YC  G    AL + + +
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 128 IDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
             +    +   ++ L++ F +   + KA  L+ +M +  ++ N  T+ +LIHG  K+  +
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A +L   M +SG   D   Y V I  LCK   +E A  L+  +K  GI  +  I S L
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 247 ITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           I      G+++    LL K +      N++T   NS++       +  +A  L+  MIK 
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITY--NSLIDGYCKEKNFKEARLLVDIMIKR 583

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           +                + P   ++ I+I+ LLKD + D A  +F +M   G   +VF+Y
Sbjct: 584 D----------------IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
              I   C+  RL+++  L+ +M   G  P             R   + GA  ++++M  
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV--CYSAAIGGLIDIKRV 480
            G EP     + LIK L        +       +  G   +    C+          +RV
Sbjct: 688 VGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCW----------RRV 737

Query: 481 D--LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           D    L+LF  +  HGC P+   Y   I+GLCK   +  A  LF+ M  KG  P+   YN
Sbjct: 738 DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYN 797

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEK-----------------ESGSP------------- 568
            L+   C+ G   +A+  L  M+E                  + G+              
Sbjct: 798 SLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQC 857

Query: 569 ----DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               D + +  LIDGL   G  D    L+  ME +GC  +  T+  LI G 
Sbjct: 858 EYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 175/389 (44%), Gaps = 28/389 (7%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           S++ ILV NG +  A N+   MIK                   S ++S   + +  +L+ 
Sbjct: 115 SMLNILVPNGYLRIAENMRILMIK-------------------STDSSENALFVLEMLR- 154

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             ++  +  F+    + C      YN L+  L     ++E   +  EM +    P  FTL
Sbjct: 155 -SMNRRVDAFKFKLTLRC------YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTL 207

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N+M    C+  +VV A   V K+   G        T LI   C++     A      M  
Sbjct: 208 NTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPN 267

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G L + V Y+  I G  + +RVD AL+LF  +    C P V  Y +II  LC+  R  E
Sbjct: 268 KGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTE 327

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A ++F EM  K   P+V TY +LI   C+  N D A   L+ MLEK    P V+TY  LI
Sbjct: 328 ALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK-GLIPSVVTYNALI 386

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DG C  G    A+ + + ME   C+PN  T+  LI G C+      A+     M E+ ++
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P++  +  LI     E +   A+++L  M
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLM 475



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 8/166 (4%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +    G  I  L  VG +E A+ LFD +K +G   PN   YN LL     SC + L 
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQS-PNEDIYNSLLGC---SCQLGLY 809

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYC---NSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
              ++ +           L     + C   + G  +KA  VF   +   +  DE V+ +L
Sbjct: 810 GEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVL 869

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           +    K G  DK  +L   M+    +++ KT+ +LI GF     +D
Sbjct: 870 IDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 228/505 (45%), Gaps = 53/505 (10%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GE+++    +E M +     +      LI  F K  R   A Q+   + +SG   D   Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +V+I G CK+ ++E AL++   M   G++P+      ++ S  D G+L            
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKL------------ 197

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                 QA  +L   ++ +                  P+  +  
Sbjct: 198 ---------------------KQAMQVLGRQLQSK----------------CYPDVVTCT 220

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I+   K+  +  A+ LF EM   GC  +V  YN LI G C   RL+E+   L+++   
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY 280

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G +P   + N + R LC     + A+ L+  M  +G  P V    +LI  LC+ G   +A
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L  M + G  P+   ++  I G  + K +D A+E    + + GC PD+V YNI+++ 
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  +V +A  + +++ +KG  PS+ +YN +I+G  K G  + A+  L  M  K    P
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKP 459

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D+IT T+++ GL   G+  +A+  ++ ++     PN   + ++ITGLCK  +   A+   
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519

Query: 629 RMMKEKGMKPDMFVFVALISAFLSE 653
             M  KG KP    +  LI     E
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYE 544



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 227/456 (49%), Gaps = 26/456 (5%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-DRDVNTMT 273
           L +N +LE   +    M   G +PD       + +C      T L++E  +  R  N   
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPD-------VIAC------TALIREFCKIGRTKNA-- 133

Query: 274 LLCNSIMRILVSNGSI--DQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              + IM IL  +G++    +YN L+    K   I +    + ++ +  VSPN +++D +
Sbjct: 134 ---SQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAV 187

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           + +L   GKL  A+ +     Q  C  +V     LID  C  + + ++ +L  EM   G 
Sbjct: 188 LCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGC 247

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           KP   T N + +  C+   +  A+  ++K+   G +P V  + ++++ LC  G+ M+A +
Sbjct: 248 KPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMK 307

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L  M+++G LP +V ++  I  L     +  AL +   +  HG  P+  ++N +I G C
Sbjct: 308 LLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 367

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
             + +  A +    M+++G  P + TYN+L+   CK G +D A++ LS+ L  +  SP +
Sbjct: 368 NGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ-LSSKGCSPSL 426

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           I+Y T+IDGL   G+ + A+ L  EM  KG  P+ IT  +++ GL +  + R A+  F  
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +K   ++P+ F++ ++I+         LA + L +M
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 221/464 (47%), Gaps = 22/464 (4%)

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + L+  F K G    A +++  +++    ++  ++ VLI G+ K   +++AL++ D+M  
Sbjct: 118 TALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-- 175

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G + +AA YD ++  LC   +L+ A+Q+      S   PD    + LI +   E  +  
Sbjct: 176 -GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ 234

Query: 259 LVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            +K   E R+       +  N +++     G +D+A   L+ +         G +     
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL------PSYGCQ----- 283

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  S ++I+ +L   G+   A+ L   M + GC+ +V  +N LI+ LC    L 
Sbjct: 284 -----PDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLG 338

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++  +L  M + G  P   + N + +  C  + +  A+  +  M  +G  P +    +L+
Sbjct: 339 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILL 398

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK GK  +A   L+ +  +G  P ++ Y+  I GL+ + + +LA+EL  ++C  G  
Sbjct: 399 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 458

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD++    ++ GL +  +V EA   F+ +    + P+   YN +I G CKS     A+  
Sbjct: 459 PDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDF 518

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           L+ M+ K    P   TYTTLI G+   G  +DA  L NE+  +G
Sbjct: 519 LADMVAKGC-KPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 220/492 (44%), Gaps = 25/492 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +EE +   + +  +G   P+  +   L+   CK          +  +++ G   D  +
Sbjct: 93  GELEEGSRFLEYMTNKGKS-PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTS 151

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
              L+  YC SG+ ++AL V + +      +   +  +L +    G++ +A +++ R   
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM--GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
                +  T  VLI    K+S V +A++LF++M   G   D   Y+V+I G CK  +L+ 
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSI 279
           A++   ++   G  PD    + ++ S    G     + LL   + +    + +T   N +
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF--NIL 327

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L   G + +A N+L+                M+ K   +PN+ SF+ +I        
Sbjct: 328 INFLCQKGLLGKALNVLE----------------MMPKHGHTPNSRSFNPLIQGFCNGKG 371

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A+     M   GC  ++  YN L+  LC   +++++  +L ++   G  P+  + N+
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   L +      A+ L+ +M  +G +P +   T ++  L + GK  EA +F   + +  
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P+   Y++ I GL   ++  LA++   D+ A GC P    Y  +I G+       +A 
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDAS 551

Query: 520 DLFNEMITKGLI 531
            L NE+ ++GL+
Sbjct: 552 KLSNELYSRGLV 563



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 141/300 (47%), Gaps = 21/300 (7%)

Query: 350 MTQIGCMQNVF-LYNNLID-----GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           M  + C  +VF LY+ +ID     G  +   L      + + E SG K  +   +  F  
Sbjct: 1   MYNVACKFHVFGLYDGVIDFRKPKGTWSRKHLGNCVFAVSKYENSGLK-GNLQHSERFS- 58

Query: 404 LCRRQDVVGALNLVRKM--RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                   GALN V     RV     + +     ++ L ++G+  E  RFL  M  +G  
Sbjct: 59  -------KGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKS 111

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD++  +A I     I R   A ++   +   G   DV +YN++ISG CK+  + EA  +
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
            + M   G+ P+ ATY+ ++   C  G + QAM  L R L+ +   PDV+T T LID  C
Sbjct: 172 LDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKC-YPDVVTCTVLIDATC 227

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                  A+ L+NEM  KGC P+ +T+  LI G CK  R   A+   + +   G +PD+ 
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVI 287


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 236/515 (45%), Gaps = 58/515 (11%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L +RM+   I+ N  T  +LI+ +    +++ A  +F K+ K G+  D   Y  +I GL
Sbjct: 70  HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGL 129

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTM 272
           C N Q++ +L  +  +   GI  D      LI         G    L+++I E       
Sbjct: 130 CLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI-EGEICRPD 188

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            ++ N+I+  L  +  +  A++L   M                F+  V PN  ++  +I 
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEM----------------FEKRVFPNVVTYTSLIY 232

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
                G+LD A  L  EM       NV  +N L+DGLC   ++ E+  L+  M + G  P
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             FT N++                     + G+         L+KE    GKA   F   
Sbjct: 293 DVFTYNAL---------------------MDGY--------FLVKEA---GKAKNVFNI- 319

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M Q G   D+  YS  I GL  +K +D A++LF  +      PDVVAY+ +I GLCK+
Sbjct: 320 --MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKS 377

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVI 571
            R+  A    +EM  +G  P+V TY  LI+  CKS  +D+A+  L ++  K+ G   ++ 
Sbjct: 378 GRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI--KDQGIQANMY 435

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY  L+DGLC  GR  DA  ++ ++  KG   + +T+  +I GLCK      AL     M
Sbjct: 436 TYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKM 495

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++KG  PD   +  +I+AF  +     A ++L+EM
Sbjct: 496 EDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 27/480 (5%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F     ++ A+  F++M +         +  I+G L K K   + + L+  M+  GI  +
Sbjct: 24  FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83

Query: 240 FEILSKLITSCSD----EGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           +  L+ LI S           ++  K  ++    D+ T T    +++R L  NG + ++ 
Sbjct: 84  YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYT----TLIRGLCLNGQVKESL 139

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           N    ++        G+++  +  GT          +IN L K G+   AL L R++   
Sbjct: 140 NFHDRLVSQ------GIKLDHVSYGT----------LINGLCKIGQTGPALRLLRKIEGE 183

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            C  +V +YN +IDGLC    + ++++L  EM E    P   T  S+    C    +  A
Sbjct: 184 ICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKA 243

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L+ +M ++   P V     L+  LCK GK  EA   +  M++EG  PD+  Y+A + G
Sbjct: 244 FGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDG 303

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
              +K    A  +F  +   G   DV +Y+++ISGL K + + EA DLF  M  + +IP 
Sbjct: 304 YFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD 363

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  Y+ LI+G CKSG I+ A+  +  M ++    P+VITYT+LID LC + + D AI L 
Sbjct: 364 VVAYSSLIDGLCKSGRINSALKYVDEMHDR-GQPPNVITYTSLIDALCKSHQVDKAIALL 422

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            +++++G   N  T+  L+ GLCK  R   A   F+ +  KG   D+  +  +I+    E
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 244/534 (45%), Gaps = 51/534 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    +  +L +L K+    +V    + M+ +G   +  TL  L+  YC+  Q + A SV
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F +I+  G+  + + ++ L+      G+V ++    +R+    I+L+  ++  LI+G  K
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +   AL+L  K+       D  MY+ II GLCK+K +  A  LY EM    + P+   
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI      G+L                                 D+A+ LL  M+  
Sbjct: 227 YTSLIYGFCIVGQL---------------------------------DKAFGLLNEMVLK 253

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            V+PN  +F+ +++ L K+GK+  A SL   M + G   +VF Y
Sbjct: 254 ----------------NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 297

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L+DG        ++  +   M + G      + + M   L + + +  A++L   MR 
Sbjct: 298 NALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN 357

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P V   + LI  LCK G+   A +++ +M   G  P+++ Y++ I  L    +VD 
Sbjct: 358 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDK 417

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ L + I   G   ++  YNI++ GLCK  R+ +A+ +F +++ KG    V TY+++IN
Sbjct: 418 AIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMIN 477

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           G CK    D+A+  LS+M E +   PD I Y T+I+        D A  L  EM
Sbjct: 478 GLCKESLFDEALTLLSKM-EDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 180/393 (45%), Gaps = 22/393 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  +G    A  L  +++ E +C P+   YN +++ LCK   V        E
Sbjct: 156 SYGTLINGLCKIGQTGPALRLLRKIEGE-ICRPDVVMYNTIIDGLCKDKLVRDAFDLYCE 214

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWG 149
           M +     +  T T L+  +C  GQ DKA  + NE++    V+ +V  F+ L+    K G
Sbjct: 215 MFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN-VNPNVCTFNTLVDGLCKEG 273

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++ +A  L+  M    +  +  T+  L+ G+       KA  +F+ M + G   D   Y 
Sbjct: 274 KMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYS 333

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DR 267
           V+I GL K K L+ A+ L+  M+   + PD    S LI      G +   +K + E  DR
Sbjct: 334 VMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDR 393

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 +   S++  L  +  +D+A  LL+       I D G++           N  ++
Sbjct: 394 GQPPNVITYTSLIDALCKSHQVDKAIALLKK------IKDQGIQ----------ANMYTY 437

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+++ L KDG+L  A  +F+++   G   +V  Y+ +I+GLC  +  +E+  LL +ME+
Sbjct: 438 NILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMED 497

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            G  P      ++      +     A  L+R+M
Sbjct: 498 KGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L     V++A  L  ++K +G+   N Y+YN L++ LCK   +   +   +++   
Sbjct: 405 LIDALCKSHQVDKAIALLKKIKDQGI-QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK 463

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  T + ++   C    FD+AL++ +++ D G V D   +  ++ AF +    DKA
Sbjct: 464 GHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKA 523

Query: 155 CELIERMDDC 164
            +L+  M DC
Sbjct: 524 EKLLREMIDC 533


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 174/683 (25%), Positives = 286/683 (41%), Gaps = 86/683 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVV-KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKRE 59
           +A IL  A+    +  L Q ++ + R F  P     L+R L  +GL+E A   F  ++  
Sbjct: 52  IARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFS-LVRTLADLGLLENAISQFRSLRDR 110

Query: 60  GLCVPNNYS-YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
               P   S YN L     K   VD V    K+M         YT               
Sbjct: 111 FPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYT--------------- 155

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                              F++L+ A  + G ++ A E+ ++M +   + NE +  +L+ 
Sbjct: 156 -------------------FNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVR 196

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+ +       + L D+M  SG   +   Y+ +I  LC   Q   A +L  +M+  G++P
Sbjct: 197 GYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSP 256

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVN-------TMTLLCNSIMRILVSNGSIDQ 291
           D    +  I +    G++ L    I+ D  ++         T+  N ++    S G  ++
Sbjct: 257 DIVTFNCRIAALCKSGQI-LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  +  +M   E ++                   S++I +  L++ GKL  A  +  EM 
Sbjct: 316 ARAIFDSMKNSETLS-----------------LRSYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +     N++ YN L+ GLC      ++  +L  M ESG  P   T +++    CRR  ++
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  ++R+M   G  P +    +L+  L K G+A EA   L  M + G+  D V  +  I
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 472 GGLIDIKRVDLALELFRDICAHG-----------------------CCPDVVAYNIIISG 508
            GL     +D A+E+   +   G                       C PD + Y  II G
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGG 538

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  RV EA+    EMI K L P    ++  I  +CK G +  A   L  M EK+  + 
Sbjct: 539 LCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM-EKKGCNK 597

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
            + TY +LI GL    +  +   L +EM+E+G  PN  T+  +I+ L +  + + A    
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLL 657

Query: 629 RMMKEKGMKPDMFVFVALISAFL 651
             M +KG+ P+++ F  LI AF 
Sbjct: 658 DEMLQKGISPNIYTFRILIGAFF 680



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 243/574 (42%), Gaps = 75/574 (13%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFS---KWGEVDKACELIERMDD 163
           L++   + G  + A+S F  + D    D    S   + F    K   VD    L + M  
Sbjct: 87  LVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAV 146

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             ++    TF +LI    +   ++ A ++FDKM++ G   +     +++ G C+      
Sbjct: 147 AKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSH 206

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI- 282
            + L  EM+ SG  P+    + +I+S   EG+     K + + R+V     +     RI 
Sbjct: 207 GIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIA 266

Query: 283 -LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +G I +A  + + M        +  EM     G   PNT ++++++     +G  +
Sbjct: 267 ALCKSGQILEASRIFRDM-------QIDEEM-----GLPKPNTVTYNLMLEGFCSEGMFE 314

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A ++F  M     + ++  YN  + GL  S +L E++ +L EM E   KP  ++ N   
Sbjct: 315 EARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYN--- 370

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                                           +L+  LCK+G   +A   L  M + G  
Sbjct: 371 --------------------------------ILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD V YS  + G     ++  A  + R++   GC P++   NI++  L K  R +EAEDL
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-------------- 567
              M  +G      T N +ING CK+GN+D+A+  +S M  + S S              
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 568 --------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
                   PD ITY T+I GLC  GR D+A     EM  K  +P+ + F   I   CK  
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +  +A    + M++KG    +  + +LI    SE
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSE 612



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 259/571 (45%), Gaps = 16/571 (2%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A   +I  L   G   EA  L ++++  GL  P+  ++NC + ALCKS  +       ++
Sbjct: 225 AYNTVISSLCGEGQTVEAEKLVEKMREVGLS-PDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 92  MQ-DYGWGYDK---YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK 147
           MQ D   G  K    T   +L+ +C+ G F++A ++F+ + +   +    ++I ++   +
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVR 343

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++ +A  ++  M + NI+ N  ++ +L+HG  K      A  +   M +SG A D   
Sbjct: 344 SGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVT 403

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWE 265
           Y  ++ G C+  ++  A  +  EM   G  P+    + L+ S   EG  +    + ++  
Sbjct: 404 YSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMN 463

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGE-PIADVGVEMLMIFK-----G 318
           +R      + CN+++  L   G++D+A  ++  M  +G   + ++G   + +F       
Sbjct: 464 ERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P++ ++  II  L K G++D A     EM       +  +++  I   C   +L  +
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSA 583

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + +L+EME+ G   +  T NS+ + L     +     L+ +M+ +G  P V     +I  
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L + GK  +A   L +M+Q+G  P+I  +   IG          A ELF +I    C   
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHK 702

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              Y+ + + L       +A++LF   + + L      Y  LI   CK G +D A   L 
Sbjct: 703 ESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILH 762

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           +M++K+  S D  ++  +ID L   G    A
Sbjct: 763 KMMDKQY-SFDPASFMPVIDELGKRGSKHAA 792



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 8/352 (2%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P T +F+++I+ L + G L+ A  +F +M++ GC  N F    L+ G C +       
Sbjct: 149 VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGI 208

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM  SG  P     N++   LC     V A  LV KMR  G  P +      I  L
Sbjct: 209 DLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAAL 268

Query: 440 CKHGKAMEAFRFLTDMVQEGFL----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           CK G+ +EA R   DM  +  +    P+ V Y+  + G       + A  +F D   +  
Sbjct: 269 CKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSE 327

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              + +YNI + GL ++ ++ EA  + NEM  K + P++ +YN+L++G CK G    A  
Sbjct: 328 TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARS 387

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            L  M  +ESG +PD +TY+TL+ G C  G+  +A  +  EM + GC PN  T   L+  
Sbjct: 388 ILGLM--RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L K  R   A    +MM E+G   D      +I+      N   A E++  M
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 8/350 (2%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P  S ++++    LK+ ++D  + L+++M         + +N LI  LC    LE + E+
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELC 440
             +M E G KP  F+L  + R  CR       ++L+ +MR  G  P  V +NT +I  LC
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNT-VISSLC 234

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG----CC 496
             G+ +EA + +  M + G  PDIV ++  I  L    ++  A  +FRD+          
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+ V YN+++ G C      EA  +F+ M     + S+ +YN+ + G  +SG + +A L 
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L+ M EK    P++ +Y  L+ GLC  G   DA  +   M E G AP+ +T+  L+ G C
Sbjct: 354 LNEMAEKNI-KPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +   A    R M + G  P+M+    L+ +   E     A ++L+ M
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 2/229 (0%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           +  RVL +++ K  C  S      LI+ LGS   + E   L D++K  G+  PN Y+YN 
Sbjct: 582 SAFRVL-KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI-FPNVYTYNN 639

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           ++  L +   +      L EM   G   + YT   L+  +  +  F  A  +F   +   
Sbjct: 640 IISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLC 699

Query: 132 WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
              E ++S +       GE  KA EL E   D ++ L    +  LI    K  ++D A  
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +  KM    ++ D A +  +I  L K      A +    M       DF
Sbjct: 760 ILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDF 808


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 242/530 (45%), Gaps = 25/530 (4%)

Query: 141  LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKS 199
            L+ A++  G + KA ++ ER+ +    L E T C  L+   V++ R D A +L+D+M   
Sbjct: 1082 LVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGK 1141

Query: 200  GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT-- 257
               +D     V++ GLC  +++E  L+L     G+G  P     + LI      G++   
Sbjct: 1142 DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 1201

Query: 258  -LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             LL+ E           +     +  LV+ GS      L+  + K   +  +G   L + 
Sbjct: 1202 LLLLGE-----------METKGFLPTLVTYGS------LINWLGKKGDLEKIGSLFLEMR 1244

Query: 317  KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            K   SPN   ++ +I+ L K      A+ + ++M   GC  ++  +N LI GLC+   + 
Sbjct: 1245 KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304

Query: 377  ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            ++   LRE       P   +   +    C R +++ A +L+ +M  +GH P V     LI
Sbjct: 1305 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 1364

Query: 437  KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              L   GK  EA      M +    PD+  Y+  I GL   + +  A  +  ++      
Sbjct: 1365 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1424

Query: 497  PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            PD   Y  +I G  +++ + +A  +F  M  KG+ P + + N +I G+C+ G + +A+LC
Sbjct: 1425 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILC 1484

Query: 557  LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            +S M  K    PD  TYTT+I G    G  + A+    +M ++ C PN +T+ +LI G C
Sbjct: 1485 MSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 617  KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE---LNPPLAFEVL 663
            K      A   F  M+ + + P++  +  LI +   +   L   L FE +
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 1593



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 282/639 (44%), Gaps = 37/639 (5%)

Query: 33   LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
            LG L+      G++ +A  + ++V+ +   +P     N LL+ L +    D       EM
Sbjct: 1079 LGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEM 1138

Query: 93   QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEV 151
                 G D Y+   L++  C   + ++ L +       G +   VF ++L+  + + G++
Sbjct: 1139 LGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDM 1198

Query: 152  DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
             +   L+  M+         T+  LI+   KK  ++K   LF +M K GF+ +  +Y+ +
Sbjct: 1199 GRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSV 1258

Query: 212  IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDV 269
            I  LCK +    A+ +  +M  SG  PD    + LIT    EG +      + E   R++
Sbjct: 1259 IDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 1318

Query: 270  NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            N   L    ++      G +  A +LL             VEM+   +G  +P+  +F  
Sbjct: 1319 NPNQLSYTPLIHGFCMRGELMVASDLL-------------VEMMG--RGH-TPDVVTFGA 1362

Query: 330  IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            +I+ L+  GK+  AL +  +MT+     +V +YN LI GLC    L  +  +L EM E  
Sbjct: 1363 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN 1422

Query: 390  FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             +P  F   ++     R +++  A  +   M  +G  P +     +IK  C+ G   EA 
Sbjct: 1423 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAI 1482

Query: 450  RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
              +++M + G +PD   Y+  I G      ++ AL    D+    C P+VV Y+ +I+G 
Sbjct: 1483 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 1542

Query: 510  CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            CK      AE LF  M  + L P+V TY +LI    K   + +A L    ML     SP+
Sbjct: 1543 CKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC-SPN 1601

Query: 570  VITYTTLIDGLC----------------IAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
             +T   L++GL                 + G+ D  ++++ ++      P    + A+I 
Sbjct: 1602 DVTLHYLVNGLTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIF 1660

Query: 614  GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             LC+ +  R AL     M +KG  P+   F++L+  F S
Sbjct: 1661 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 1699



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 1/319 (0%)

Query: 348  REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            R   Q G +  V   N L+  L    R +++ +L  EM        +++   + R LC  
Sbjct: 1101 RVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLE 1160

Query: 408  QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            + V   L L+      G  P V    +LI   C+ G        L +M  +GFLP +V Y
Sbjct: 1161 RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTY 1220

Query: 468  SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
             + I  L     ++    LF ++   G  P+V  YN +I  LCK +   +A  +  +M  
Sbjct: 1221 GSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFA 1280

Query: 528  KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
             G  P + T+N LI G C  G++ +A   L   + +E  +P+ ++YT LI G C+ G   
Sbjct: 1281 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL-NPNQLSYTPLIHGFCMRGELM 1339

Query: 588  DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
             A  L  EM  +G  P+ +TF ALI GL    +   AL+    M E+ + PD+ ++  LI
Sbjct: 1340 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1399

Query: 648  SAFLSELNPPLAFEVLKEM 666
            S    +   P A  +L+EM
Sbjct: 1400 SGLCKKRMLPAAKNILEEM 1418



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 221/551 (40%), Gaps = 40/551 (7%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            L+R L     VEE   L +     G C+P+   YN L++  C+   +    + L EM+  
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAG-CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETK 1211

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
            G+     T   L+      G  +K  S+F E+   G+     +++ ++ A  K     +A
Sbjct: 1212 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQA 1271

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              ++++M       +  TF  LI G   +  V KA     +  +     +   Y  +I G
Sbjct: 1272 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1331

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
             C   +L +A  L  EM G G TPD      LI      G+++  L+V+E   +R V   
Sbjct: 1332 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1391

Query: 273  TLLCNSIMRILVSNGSIDQAYNLLQAM-------------------IKGEPIADV-GVEM 312
              + N ++  L     +  A N+L+ M                   I+ E + D   +  
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451

Query: 313  LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
             M  KG + P+  S + +I    + G +  A+     M ++GC+ + F Y  +I G    
Sbjct: 1452 FMEHKG-ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510

Query: 373  NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
              L  +   L +M +   KP   T +S+    C+  D   A  L   M+ +   P V   
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTY 1570

Query: 433  TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI---------------DI 477
            T+LI  L K  K + A  +   M+     P+ V     + GL                ++
Sbjct: 1571 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 1630

Query: 478  KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
               D  L +F+ +      P   AYN II  LC+   + EA D  N M  KG +P+  T+
Sbjct: 1631 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1690

Query: 538  NLLINGWCKSG 548
              L+ G+C  G
Sbjct: 1691 LSLLYGFCSVG 1701



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 2/288 (0%)

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKE 438
            + L+ M  +G  PT   L ++         +  A  +  ++R Q G  P V H   L+K 
Sbjct: 1062 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKL 1121

Query: 439  LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            L +  +  +A +   +M+ +    D       + GL   +RV+  L+L       GC P 
Sbjct: 1122 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1181

Query: 499  VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            VV YN++I G C+   +     L  EM TKG +P++ TY  LIN   K G++++ +  L 
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK-IGSLF 1240

Query: 559  RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
              + K   SP+V  Y ++ID LC       A+++  +M   GC P+ ITF  LITGLC  
Sbjct: 1241 LEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 1300

Query: 619  DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               R A    R    + + P+   +  LI  F       +A ++L EM
Sbjct: 1301 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 51/132 (38%)

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            +D    M   G  P+ A    L+  +  +G + +A     R+ E+    P+V     L+ 
Sbjct: 1061 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLK 1120

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
             L    R DDA  L++EM  K    +  +   L+ GLC   R    L         G  P
Sbjct: 1121 LLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIP 1180

Query: 639  DMFVFVALISAF 650
             +  +  LI  +
Sbjct: 1181 HVVFYNVLIDGY 1192


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 257/571 (45%), Gaps = 34/571 (5%)

Query: 30   PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMR 88
            P       + L   GL+ EA  +F+++   GL +  + S N  L  L K C       + 
Sbjct: 618  PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD-SCNVYLTRLSKDCYKTATAIIV 676

Query: 89   LKEMQDYG--WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
             +E  + G  W    Y +  ++   C  G+  +A  +   +   G+  + + +S ++  +
Sbjct: 677  FREFPEVGVCWNVASYNI--VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 734

Query: 146  SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
             ++GE+DK  +LIE M    ++ N   +  +I    +  ++ +A + F +M + G   D 
Sbjct: 735  CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794

Query: 206  AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +Y  +I G CK   +  A + + EM    ITPD    + +I+     G++    K   E
Sbjct: 795  VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854

Query: 266  ------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                  + D  T T L N   +     G +  A+ +   MI+                  
Sbjct: 855  MFCKGLEPDSVTFTELINGYCKA----GHMKDAFRVHNHMIQA----------------G 894

Query: 320  VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             SPN  ++  +I+ L K+G LD A  L  EM +IG   N+F YN++++GLC S  +EE+ 
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L+ E E +G      T  ++    C+  ++  A  ++++M  +G +P +    +L+   
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 440  CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            C HG   +  + L  M+ +G  P+   +++ +        +  A  +++D+C+ G  PD 
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 500  VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
              Y  ++ G CKA+ + EA  LF EM  KG   SV+TY++LI G+ K     +A     +
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134

Query: 560  MLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            M  +E  + D   +    D      RPD  +
Sbjct: 1135 M-RREGLAADKEIFDFFSDTKYKGKRPDTIV 1164



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 243/573 (42%), Gaps = 89/573 (15%)

Query: 97   WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
            WG D        QV  + G   +A  VF +++++G                         
Sbjct: 614  WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG------------------------- 648

Query: 157  LIERMDDCNI---RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
            L+  +D CN+   RL++  +           +   A+ +F +  + G   + A Y+++I 
Sbjct: 649  LVLSVDSCNVYLTRLSKDCY-----------KTATAIIVFREFPEVGVCWNVASYNIVIH 697

Query: 214  GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
             +C+  +++ A  L   M+  G TPD                             V + +
Sbjct: 698  FVCQLGRIKEAHHLLLLMELKGYTPD-----------------------------VISYS 728

Query: 274  LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
             + N   R     G +D+ + L++ M +               KG + PN+  +  II  
Sbjct: 729  TVVNGYCRF----GELDKVWKLIEVMKR---------------KG-LKPNSYIYGSIIGL 768

Query: 334  LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            L +  KL  A   F EM + G + +  +Y  LIDG C    +  + +   EM      P 
Sbjct: 769  LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 828

Query: 394  HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
              T  ++    C+  D+V A  L  +M  +G EP     T LI   CK G   +AFR   
Sbjct: 829  VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888

Query: 454  DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
             M+Q G  P++V Y+  I GL     +D A EL  ++   G  P++  YN I++GLCK+ 
Sbjct: 889  HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 948

Query: 514  RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
             + EA  L  E    GL     TY  L++ +CKSG +D+A   L  ML K    P ++T+
Sbjct: 949  NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTF 1007

Query: 574  TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
              L++G C+ G  +D   L N M  KG APN  TF +L+   C  +  +AA   ++ M  
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 634  KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +G+ PD   +  L+       N   A+ + +EM
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 229/506 (45%), Gaps = 24/506 (4%)

Query: 31   GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
             +   +I  +  +G ++EA+ L   ++ +G   P+  SY+ ++   C+   +D V   ++
Sbjct: 690  ASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-TPDVISYSTVVNGYCRFGELDKVWKLIE 748

Query: 91   EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
             M+  G   + Y    ++ + C   +  +A   F+E+I  G + D  V++ L+  F K G
Sbjct: 749  VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808

Query: 150  EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            ++  A +    M   +I  +  T+  +I GF +   + +A +LF +M   G   D+  + 
Sbjct: 809  DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868

Query: 210  VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWE- 265
             +I G CK   ++ A ++++ M  +G +P+    + LI     EG+L     L+ E+W+ 
Sbjct: 869  ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928

Query: 266  DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                N  T   NSI+  L  +G+I++A  L+     GE  A             ++ +T 
Sbjct: 929  GLQPNIFTY--NSIVNGLCKSGNIEEAVKLV-----GEFEA-----------AGLNADTV 970

Query: 326  SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            ++  +++   K G++D A  + +EM   G    +  +N L++G C    LE+  +LL  M
Sbjct: 971  TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030

Query: 386  EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
               G  P   T NS+ +  C R ++  A  + + M  +G  P  K    L+K  CK    
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090

Query: 446  MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             EA+    +M  +GF   +  YS  I G +  K+   A E+F  +   G   D   ++  
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 1150

Query: 506  ISGLCKAQRVAEAEDLFNEMITKGLI 531
                 K +R     D  +E+I   L+
Sbjct: 1151 SDTKYKGKRPDTIVDPIDEIIENYLV 1176


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++ I+I     +  +  A+ L  EM   GC  +V  YN L++G+C   RL+E+ + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L  M   G +P   T N + R +C     + A  L+ +M  +G  P V    +LI  LC+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A   L  M   G  P+ + Y+  + G    K++D A++    + + GC PD+V 
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +++ LCK  +V  A +L N++ +KG  P + TYN +I+G  K G  DQA+  L  M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    PDVITY++LI GL   G+ ++AI  ++++E  G  PN  T+ +++ GLCK  + 
Sbjct: 254 GK-GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A+     M  KG KP    +  LI    +E     A E+L E+
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 187/405 (46%), Gaps = 55/405 (13%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ +LI     +S V +A++L D+M   G   D   Y+V++ G+CK  +L+ A++  + M
Sbjct: 18  TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSM 77

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G  P+      +IT                            N I+R + S G    
Sbjct: 78  PSYGSQPN------VITH---------------------------NIILRSMCSTGRWMD 104

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M++               KG  SP+  +F+I+IN L + G L  A+ +  +M 
Sbjct: 105 AEKLLTEMVR---------------KG-CSPSVVTFNILINFLCRKGLLGRAIDILEKMP 148

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  N   YN L+ G C   +++ + + L  M   G  P   T N+M   LC+   V 
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+ L+ ++  +G  P +     +I  L K GK  +A   L +M  +G  PD++ YS+ I
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL    +V+ A++ F D+   G  P+   YN I+ GLCKAQ+   A D    MI+KG  
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCK 328

Query: 532 PSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVI 571
           P+  +Y +LI G    G   +A+     LC SR + K+S +  V+
Sbjct: 329 PTEVSYTILIEGIANEGLAKEALELLNELC-SRGVVKKSSAEQVV 372



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 145/271 (53%), Gaps = 2/271 (0%)

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R++E+  + P   T   +    C    V  A+ L+ +M  +G +P V    +L+  +CK 
Sbjct: 6   RQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKE 64

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  EA +FL  M   G  P+++ ++  +  +    R   A +L  ++   GC P VV +
Sbjct: 65  GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           NI+I+ LC+   +  A D+  +M T G  P+  +YN L++G+CK   +D+A+  L  M+ 
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVS 184

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +    PD++TY T++  LC  G+ D A+ L N++  KGC+P  IT+  +I GL K  +  
Sbjct: 185 R-GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTD 243

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            A+     M+ KG+KPD+  + +LI+    E
Sbjct: 244 QAVELLHEMRGKGLKPDVITYSSLIAGLSRE 274



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 172/380 (45%), Gaps = 51/380 (13%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V +A  L D++   G C P+  +YN L+  +CK   +D     L  M  YG   +  T  
Sbjct: 32  VGQAMKLLDEMGSRG-CKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHN 90

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            +L+  C++G++  A  +  E++  G     V F+IL+    + G + +A +++E+M   
Sbjct: 91  IILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTH 150

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               N  ++  L+HGF K+ ++D+A+Q  + M   G   D   Y+ ++  LCK+ +++ A
Sbjct: 151 GCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAA 210

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           ++L +++   G +P       LIT                            N+++  L 
Sbjct: 211 VELLNQLSSKGCSP------VLITY---------------------------NTVIDGLS 237

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G  DQA  LL  M +G              KG + P+  ++  +I  L ++GK++ A+
Sbjct: 238 KVGKTDQAVELLHEM-RG--------------KG-LKPDVITYSSLIAGLSREGKVEEAI 281

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
             F ++   G   N F YN+++ GLC + + + + + L  M   G KPT  +   +   +
Sbjct: 282 KFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341

Query: 405 CRRQDVVGALNLVRKMRVQG 424
                   AL L+ ++  +G
Sbjct: 342 ANEGLAKEALELLNELCSRG 361



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 102/256 (39%), Gaps = 37/256 (14%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++V+  C  S      LI  L   GL+  A  + +++   G C PN+ SYN LL   
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG-CTPNSLSYNPLLHGF 166

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA---------------L 121
           CK   +D     L+ M   G   D  T   +L   C  G+ D A               L
Sbjct: 167 CKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVL 226

Query: 122 SVFNEIIDH----GWVDEHV-----------------FSILLVAFSKWGEVDKACELIER 160
             +N +ID     G  D+ V                 +S L+   S+ G+V++A +    
Sbjct: 227 ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD 286

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           ++   ++ N  T+  ++ G  K  + D+A+     M   G       Y ++I G+     
Sbjct: 287 VEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346

Query: 221 LEMALQLYSEMKGSGI 236
            + AL+L +E+   G+
Sbjct: 347 AKEALELLNELCSRGV 362



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 2/170 (1%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+ A  L +Q+  +G C P   +YN +++ L K    D     L EM+  G   D  T
Sbjct: 205 GKVDAAVELLNQLSSKG-CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVIT 263

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L+      G+ ++A+  F+++   G   +   ++ ++    K  + D+A + +  M 
Sbjct: 264 YSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMI 323

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
               +  E ++ +LI G   +    +AL+L +++   G    ++   V++
Sbjct: 324 SKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LI  L   G VEEA   F  V  EG  V PN ++YN ++  LCK+   D     L  M  
Sbjct: 267 LIAGLSREGKVEEAIKFFHDV--EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMIS 324

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
            G    + + T L++   N G   +AL + NE+   G V +
Sbjct: 325 KGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKK 365


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 282/627 (44%), Gaps = 32/627 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL   +    + G+  EA ++   + R G   P+  +   LL  L ++  V        E
Sbjct: 142 ALRLALHAFLAAGMASEALVVLAHI-RCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVE 200

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G          ++  +C+ G     L +   +     + D   ++IL+  +S +G+
Sbjct: 201 MTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQ 260

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A +L++ M +   +    T+ +L++       +  A +LFD+M K G  ++   ++V
Sbjct: 261 AGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNV 320

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR 267
           ++ G  K  +++ A     EMK  G+ PD   F ILS          +L    +E+ E  
Sbjct: 321 LVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMF 380

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                    + ++  L  +G +D A+ L+  A+ +G P++  G                 
Sbjct: 381 GSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAG----------------- 423

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ ++    K+G  + AL ++  M +IG + +   +N LI GLCN  RL+++  LL  M 
Sbjct: 424 FNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMI 483

Query: 387 ESGF-KPTHFT--LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             G+   T FT  ++S FR      +V GAL     M   G +P     +  I  LC+  
Sbjct: 484 CKGYCVGTSFTIYMDSYFR----SGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLD 539

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EA++   +M   GF+P+ + Y++ I     +  V  AL+L + +   G  PDV   N
Sbjct: 540 HVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSN 599

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I G CK  R+      F +M   GL P V TYN +IN +C + ++  AM+ +++ML  
Sbjct: 600 ILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKML-A 658

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   PD+ TY   +  LC     + A+ + +E+   GC PN +T+  L+ G+C     RA
Sbjct: 659 DGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDVLDRA 718

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++  +++K    +P+        S F
Sbjct: 719 MILTGKLIK-MAFQPNTVTVNVFFSHF 744



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 245/574 (42%), Gaps = 65/574 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI+     G   +A  L D+++  G C P   +YN L+  LC   ++        EM   
Sbjct: 251 LIKGYSVFGQAGDAFQLLDEMRESG-CQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKV 309

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+  Y  +G+ D+A +   E+   G V D   F+IL     K+G   KA
Sbjct: 310 GIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFG---KA 366

Query: 155 CELIERMDDCN----IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
            +L     + +     R++  +  +++       R+D A +L     + G     A ++ 
Sbjct: 367 VQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNA 426

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++    K    E AL++YS M   G+ P     + LI                       
Sbjct: 427 LVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMG--------------------- 465

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               LCN         G +D A  LL+ MI KG  +                   +SF I
Sbjct: 466 ----LCN--------QGRLDDAQLLLEHMICKGYCVG------------------TSFTI 495

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            +++  + G ++ AL  + +M ++G   +   ++  I GLC  + + E+Y+   EM   G
Sbjct: 496 YMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRG 555

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-MEA 448
           F P + T NS+    CR   V  AL L +KMR  G  P V  + +LI   CK G+  M  
Sbjct: 556 FVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMN 615

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            RFL DM   G  PD+V Y+  I      + +  A+     + A GC PD+  YNI +  
Sbjct: 616 KRFL-DMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHS 674

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC    +  A  + +E++  G +P+  TYN L++G C S  +D+AM+   +++ K +  P
Sbjct: 675 LCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGIC-SDVLDRAMILTGKLI-KMAFQP 732

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           + +T        C  G    A++   +++E   A
Sbjct: 733 NTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVA 766



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 210/483 (43%), Gaps = 27/483 (5%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +H F+      +AL +   +   G     +    ++  L +  ++  A +++ EM   G 
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206

Query: 237 TPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQ 291
            P   I + +I      G + +   L+  +W     N +   C  N +++     G    
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWR---FNVIPDACSYNILIKGYSVFGQAGD 263

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A+ LL  M +                    P   +++I++N L  DG +  A  LF EM 
Sbjct: 264 AFQLLDEMRES----------------GCQPTVVTYNILVNVLCHDGNMVDARRLFDEMV 307

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           ++G   N   +N L+DG   + R++E+Y   REM+  G  P   T N +     +    V
Sbjct: 308 KVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAV 367

Query: 412 GALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
              +  +++  + G         +++  LC  G+  +A++ +   +++G    +  ++A 
Sbjct: 368 QLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNAL 427

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +         + ALE++  +   G  P    +N +I GLC   R+ +A+ L   MI KG 
Sbjct: 428 VAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGY 487

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
                ++ + ++ + +SGN++ A+ C   M+ K    PD I ++  I GLC     ++A 
Sbjct: 488 CVGT-SFTIYMDSYFRSGNVEGALKCWDDMV-KVGVQPDFIAFSAYISGLCRLDHVNEAY 545

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             + EM  +G  PN IT+ +LI+  C+      AL   + M++ G+ PD+F    LI  F
Sbjct: 546 QAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGF 605

Query: 651 LSE 653
             E
Sbjct: 606 CKE 608



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 223/511 (43%), Gaps = 47/511 (9%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++ +S C  +      L+  L   G + +A  LFD++ + G+   N  ++N L++  
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGI-EANTITFNVLVDGY 325

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K+  +D      +EM+  G   D  T   L      + +F KA+      + HG  + H
Sbjct: 326 AKAGRMDEAYAACREMKARGLVPDCCTFNIL---SAGAYKFGKAVQ-----LAHGQQELH 377

Query: 137 -VFSILLVAFSK--------W-GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            +F   + A S         W G +D A +L+    +  + ++   F  L+  + K+   
Sbjct: 378 EMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFD 437

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFEI-L 243
           ++AL+++  M K G    +  ++ +I GLC   +L+ A  L   M  KG  +   F I +
Sbjct: 438 EQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYM 497

Query: 244 SKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                S + EG L     + W+D     V    +  ++ +  L     +++AY   QA +
Sbjct: 498 DSYFRSGNVEGAL-----KCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAY---QAFV 549

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +            M  +G V PN  +++ +I+   + G +  AL L ++M Q G + +VF
Sbjct: 550 E------------MTGRGFV-PNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVF 596

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             N LIDG C   RL+   +   +M  SG  P   T N++    C  QD+  A+  + KM
Sbjct: 597 TSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKM 656

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G EP +    + +  LC +     A + L ++V  G +P+ V Y+  + G+     +
Sbjct: 657 LADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS-DVL 715

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           D A+ L   +      P+ V  N+  S  CK
Sbjct: 716 DRAMILTGKLIKMAFQPNTVTVNVFFSHFCK 746


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/599 (25%), Positives = 269/599 (44%), Gaps = 57/599 (9%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   D++T + +L       QF  A  +F+ ++  G  +DE+V++  + A+ +   +D A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM D   +++   + VLI+G  K  RV +A+ + + M   G A+D      ++ G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNT 271
            C+ ++L+MAL++  +M   G  P     S ++     +G   E   L  ++ E R V  
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           +    N+++  +  NG   +A  L+  M      +D G+E          PN  ++ I+I
Sbjct: 337 I-FAYNALLNNMCKNGMFSEADRLVNEM------SDKGLE----------PNEVTYAILI 379

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           ++L K G +D AL +   M + G    V+ YN+LI+  C  + L+ +   L EM E G  
Sbjct: 380 HSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLT 439

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFR 450
           P   + + +   LCR+ D+ GA+ L RKM  +G   W  +  T LI   CK  K  EA R
Sbjct: 440 PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKG-VAWNTYTFTALINGFCKAKKMDEASR 498

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M +    P+ V ++A I G   +  +  A +L+  +   G  PD   Y  +ISGLC
Sbjct: 499 LFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLC 558

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM---------------- 554
                ++A++   ++     + +  +   L++G+C+ G + +A                 
Sbjct: 559 LTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLI 618

Query: 555 ------------------LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
                               L R ++++   PD + +T +I+     G    A+  W+EM
Sbjct: 619 SFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEM 678

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
              G  PN +T+ AL+  LCK     +A +  + M      P+ + F   +  F +E N
Sbjct: 679 IADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGN 737



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 247/573 (43%), Gaps = 55/573 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+  EA+ L +++  +GL  PN  +Y  L+ +LCK   +D     L  M++ G     Y 
Sbjct: 351 GMFSEADRLVNEMSDKGL-EPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYP 409

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+   C     D A+   +E+++ G   +   +S ++    + G++  A EL  +M 
Sbjct: 410 YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMA 469

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  N  TF  LI+GF K  ++D+A +LF+KMT+S    +   ++ +I G C    + 
Sbjct: 470 EKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIR 529

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
            A QLY +M   G+TPD      LI+  C  +G      KE   D + N   L       
Sbjct: 530 KAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASK--AKEFVADLENNCSVL------- 580

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                                                    N  S   +++   ++G+L 
Sbjct: 581 -----------------------------------------NKFSLTALLHGFCREGRLT 599

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  ++ EM   G   ++  +  ++      +  E+S  L REM+E G +P +     M 
Sbjct: 600 EAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMI 659

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
               +  ++V ALN   +M   GH P     T L+  LCK      A     +M+   FL
Sbjct: 660 NMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFL 719

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P+   ++  +        ++ A +L+  +   G   ++V+ N +I G CK  ++ EA DL
Sbjct: 720 PNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDL 778

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
            +     G  P   +Y+ +I+  CK G+I++A+   + ML K    PD++ Y  LI    
Sbjct: 779 ISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYK-GVKPDIVAYNILIRWCN 837

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           I G  D  + ++ +M +KG  PN  T  AL  G
Sbjct: 838 IHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 241/568 (42%), Gaps = 85/568 (14%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D+H  S +L +  K  +   A  L + M    + L+E  +   I  + +   +D A  L 
Sbjct: 161 DQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLV 220

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +M   G    A  Y+V+I GLCKN+++  A+ + + M   G+  D              
Sbjct: 221 ARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAAD-------------- 266

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
            E+T                  C +++        +D A  +   M      A +G    
Sbjct: 267 -EVT------------------CRTLVYGFCRTEELDMALEMTGDM------ARLGF--- 298

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                   P+ ++   +++ L K G+++ A  L  ++ ++  + N+F YN L++ +C + 
Sbjct: 299 -------VPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNG 351

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
              E+  L+ EM + G +P   T   +   LC+R  +  AL ++ +MR +G    V    
Sbjct: 352 MFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYN 411

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK      A  FL++MV+ G  P+   YS  I GL     +  A+EL R +   
Sbjct: 412 SLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEK 471

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   +   +  +I+G CKA+++ EA  LFN+M    L P+  T+N +I G+C  G+I +A
Sbjct: 472 GVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKA 531

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIA------------------------------ 583
                +M+ +   +PD  TY +LI GLC+                               
Sbjct: 532 FQLYDQMMCR-GLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLH 590

Query: 584 -----GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                GR  +A  +WNEM   G   + I+F  ++    K      + V FR MKEKG++P
Sbjct: 591 GFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRP 650

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D      +I+ +  E N   A     EM
Sbjct: 651 DNVFHTCMINMYSKEGNMVQALNCWDEM 678



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 275/658 (41%), Gaps = 61/658 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP-- 106
           A  LFD +   G+ + + Y Y   + A C+  ++D  +  +  MQD G   DK +  P  
Sbjct: 181 ARHLFDGMLHSGVLL-DEYVYTAGIRAYCEVRNLDGAKGLVARMQDEG---DKVSAVPYN 236

Query: 107 -LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C + +  +A+ V N ++  G   DE     L+  F +  E+D A E+   M   
Sbjct: 237 VLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARL 296

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +E     ++ G  KK RV++A +L  ++ +     +   Y+ ++  +CKN     A
Sbjct: 297 GFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEA 356

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRI 282
            +L +EM   G+ P+    + LI S    G +   L + +   ++ V       NS++  
Sbjct: 357 DRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC 416

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
                 +D A   L  M+      ++G          ++PN +S+  +I  L + G L  
Sbjct: 417 CCKKDDLDMAMGFLSEMV------EIG----------LTPNAASYSPVIAGLCRKGDLSG 460

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ L R+M + G   N + +  LI+G C + +++E+  L  +M ES  +P   T N++  
Sbjct: 461 AVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIE 520

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C   D+  A  L  +M  +G  P       LI  LC    A +A  F+ D+     + 
Sbjct: 521 GYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVL 580

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +    +A + G     R+  A  ++ ++   G   D++++ II+    K     ++  LF
Sbjct: 581 NKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLF 640

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  KG+ P    +  +IN + K GN+ QA+ C   M+  +   P+ +TYT L++ LC 
Sbjct: 641 REMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMI-ADGHLPNTVTYTALVNNLCK 699

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITF---------------------------------- 608
           +     A +L  EM      PN  TF                                  
Sbjct: 700 SWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSV 759

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LI G CK  + + A+       E G  PD   +  +I     + +   A E+  EM
Sbjct: 760 NTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEM 817



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 172/717 (23%), Positives = 300/717 (41%), Gaps = 94/717 (13%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + R+ A  R L   ++ S   +        IR    V  ++ A  L  +++ EG  V 
Sbjct: 172 LVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKV- 230

Query: 65  NNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           +   YN L+  LCK+  V + V+++   M   G   D+ T   L+  +C + + D AL +
Sbjct: 231 SAVPYNVLIYGLCKNQRVREAVDVK-NSMLARGVAADEVTCRTLVYGFCRTEELDMALEM 289

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA----CEL--------------------- 157
             ++   G+V  E   S +L    K G V++A    C+L                     
Sbjct: 290 TGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCK 349

Query: 158 ----------IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                     +  M D  +  NE T+ +LIH   K+  +D AL + D+M + G       
Sbjct: 350 NGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYP 409

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWE 265
           Y+ +I   CK   L+MA+   SEM   G+TP+    S +I     +G+L+  V+      
Sbjct: 410 YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMA 469

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           ++ V   T    +++        +D+A  L   M                 +  + PN  
Sbjct: 470 EKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMT----------------ESNLEPNEV 513

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ +I      G +  A  L+ +M   G   + + Y +LI GLC ++   ++ E + ++
Sbjct: 514 TFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVV-------------GALNLV--------------- 417
           E +      F+L ++    CR   +              G L+L+               
Sbjct: 574 ENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDS 633

Query: 418 -------RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                  R+M+ +G  P    +T +I    K G  ++A     +M+ +G LP+ V Y+A 
Sbjct: 634 EKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTAL 693

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +  L     +  A  L +++ A    P+   +N  +        +  A+DL+  M+ +G 
Sbjct: 694 VNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGF 752

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           + ++ + N LI G+CK G I +A+  +SR  E     PD I+Y+T+I  LC  G  ++AI
Sbjct: 753 LANIVSVNTLIKGFCKVGQIQEAIDLISRSTEN-GFFPDCISYSTVIHELCKKGDINEAI 811

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            LWNEM  KG  P+ + +  LI            L  +  M +KG++P+     AL 
Sbjct: 812 ELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALF 868



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 1/193 (0%)

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +  G  PD    S  +  L+ I++  LA  LF  +   G   D   Y   I   C+ + +
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A+ L   M  +G   S   YN+LI G CK+  + +A+   + ML +   + D +T  T
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAA-DEVTCRT 272

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+ G C     D A+ +  +M   G  P+      ++ GL K  R   A      + E  
Sbjct: 273 LVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELR 332

Query: 636 MKPDMFVFVALIS 648
           M P++F + AL++
Sbjct: 333 MVPNIFAYNALLN 345


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 242/552 (43%), Gaps = 86/552 (15%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKM 196
            S ++ A+   G V++A EL     D +  L +   C  L++  +++ +V+ A +++++M
Sbjct: 137 LSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEM 196

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            K     D     +++ GLCK +++E   +L ++  G G  P+    + L+         
Sbjct: 197 VKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDG------- 249

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                  W+                     G +++A  L +             E+ M  
Sbjct: 250 ------YWK--------------------RGDVERANGLFK-------------ELKM-- 268

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           KG + P T ++ I+IN L K         L  EM + G   NV +YN+++D         
Sbjct: 269 KGFL-PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKI 327

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E  + LR + E+G +P   T N++    CR   V  A  L+     +G  P     T LI
Sbjct: 328 EVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLI 387

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK GK + AF     M ++G   D+V Y A + GL+    VD+AL +   +   G  
Sbjct: 388 HVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVL 447

Query: 497 PDVVAYNIIISGLCKAQRVA-----------------------------------EAEDL 521
           PD   YN++++GLCK  R++                                   EA+ L
Sbjct: 448 PDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKL 507

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F   I KG+ P V  YN +I G+CK G ++ A+ C+ RM + +  SPD  TY+T+IDG  
Sbjct: 508 FELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDH-SPDEFTYSTIIDGYV 566

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                 +A+ L+ +M ++ C PN +T+ +LI G C+      A   F  M+  G+KP++ 
Sbjct: 567 KQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVV 626

Query: 642 VFVALISAFLSE 653
            +  LI  F  E
Sbjct: 627 TYTILIGCFCKE 638



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 154/636 (24%), Positives = 275/636 (43%), Gaps = 40/636 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL F++      GLV  A  L+         +P+  + N LL AL +   V++     +E
Sbjct: 136 ALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEE 195

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV-AFSKWGE 150
           M      +D Y++  +++  C   + ++   + N+    G +   VF   LV  + K G+
Sbjct: 196 MVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGD 255

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V++A  L + +         +T+ ++I+G  KK        L  +M + G   +  +Y+ 
Sbjct: 256 VERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNS 315

Query: 211 IIGGLCKNK-QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--- 266
           I+    K+  ++E+   L   +  +G  PD    + LI+    +G++    +E+ E    
Sbjct: 316 IVDAQIKHGCKIEVGKTL-RWITENGCEPDITTYNTLISGSCRDGKVHE-AEELLEHAIK 373

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTS 325
           R ++   L    ++ +    G   +A++L   M  KG P+  V                 
Sbjct: 374 RGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLV----------------- 416

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +++ L+  G++D+AL++  +M + G + +  +YN L++GLC   RL  +  LL EM
Sbjct: 417 AYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEM 476

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                    F   ++     R   +  A  L      +G +P V     +IK  CK G  
Sbjct: 477 LHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMM 536

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A   +  M      PD   YS  I G +    +  AL+LF  +    C P+VV Y  +
Sbjct: 537 NDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSL 596

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+G C+    + AE  F EM + GL P+V TY +LI  +CK G I +A      ML    
Sbjct: 597 INGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRC 656

Query: 566 GSPDVITYTTLIDGL------CIAGRPDDAIML--------WNEMEEKGCAPNRITFMAL 611
             P+ +T+  LI+GL       ++ + ++++ +        +  M   G       + ++
Sbjct: 657 -IPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSV 715

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +  LC      AAL     M  KG+ PD   F AL+
Sbjct: 716 LICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALV 751



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/623 (23%), Positives = 247/623 (39%), Gaps = 106/623 (17%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M   L + R++   R L  D     C  +      L+      G VE AN LF ++K +G
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
             +P   +Y  ++  LCK C+   V+  L EM++ G                     D  
Sbjct: 271 F-LPTTETYGIMINGLCKKCNFKAVDGLLVEMKERG--------------------VDVN 309

Query: 121 LSVFNEIID----HG----------WVDEH-------VFSILLVAFSKWGEVDKACELIE 159
           + V+N I+D    HG          W+ E+        ++ L+    + G+V +A EL+E
Sbjct: 310 VQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLE 369

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                 +  N+ ++  LIH + K+ +  +A  LF  MT+ G   D   Y  ++ GL    
Sbjct: 370 HAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAG 429

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++++AL +  +M   G+ PD  +                                  N +
Sbjct: 430 EVDVALTVRDKMVERGVLPDANVY---------------------------------NVL 456

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M  L   G +  A  LL  M+      D  V                   +++  ++ GK
Sbjct: 457 MNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSA----------------TLVDGFIRHGK 500

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD A  LF      G    V  YN +I G C    + ++   ++ M++    P  FT ++
Sbjct: 501 LDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYST 560

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +     ++ D+  AL L  +M  Q  +P V   T LI   C+ G +  A +   +M   G
Sbjct: 561 IIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSG 620

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC--------- 510
             P++V Y+  IG      ++  A   F  +  + C P+ V +N +I+GL          
Sbjct: 621 LKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSN 680

Query: 511 KAQRVAEAE-----DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           KA    E +     D F  MI+ G    VA YN ++   C    ++ A+    +M  K  
Sbjct: 681 KANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGK-G 739

Query: 566 GSPDVITYTTLIDGLCIAGRPDD 588
             PD +++  L+ GLC+ GR  +
Sbjct: 740 IFPDPVSFAALVYGLCLEGRSKE 762



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 5/295 (1%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           NR  E Y +  ++    + P     N++   L +++ V  A  +  +M V+    W  ++
Sbjct: 151 NRALELYHIAYDIHN--YLPDVIACNALLNALIQQKKVEIARKVYEEM-VKRDGCWDNYS 207

Query: 433 T-LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++++ LCK  K  E  + + D   +G +P+IV Y+  + G      V+ A  LF+++ 
Sbjct: 208 VCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELK 267

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  P    Y I+I+GLCK       + L  EM  +G+  +V  YN +++   K G   
Sbjct: 268 MKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKI 327

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +    L R + +    PD+ TY TLI G C  G+  +A  L     ++G +PN++++  L
Sbjct: 328 EVGKTL-RWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPL 386

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I   CK  +   A   F  M EKG   D+  + AL+   ++     +A  V  +M
Sbjct: 387 IHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKM 441


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 225/504 (44%), Gaps = 51/504 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  SY  L+ ALC     D     L+ M+  G   D  T   L++  C++ + DKA+
Sbjct: 111 CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV 170

Query: 122 SVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +  E+ + G ++ +V  +S LL  + K G  +   ++   M +  I  +   +  LI  
Sbjct: 171 ELMGEMCESG-IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             K  +  KA  + D M + G   +   Y+V+I  +CK   ++ A+ +  +M   G+ PD
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI   SD  E+                                 D+A  LL+ M
Sbjct: 290 VVTYNTLIKGLSDVLEM---------------------------------DEAMWLLEEM 316

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++G              K  V PN  +F+ +I  L   G++  A  +   M + GCM N+
Sbjct: 317 VRG--------------KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI GL   +++ ++ EL+ EM   G +P  FT + + +  C+   V  A +L+  
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           MR +G EP + H   L+  +C+ G  ME  R L + +   F  D+V YS  I G      
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQG-MMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGD 481

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A EL + I   G  PD V Y+I+I+   K+  +  A  +  +M   G +P VA ++ 
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 540 LINGWCKSGNIDQAMLCLSRMLEK 563
           LI G+   G I++ +  +  M+ K
Sbjct: 542 LIQGYSTKGEINKVLELIREMITK 565



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 243/536 (45%), Gaps = 60/536 (11%)

Query: 138 FSILLVAFSKWGEVDKACELIERMD---DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           ++ +L A  + G  D+A  L+  M        R N  ++ VL+         D+A+ L  
Sbjct: 80  YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
            M  +G  +D   Y  +I GLC   +++ A++L  EM  SGI P+  + S          
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS---------- 189

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                                  +LLQ   K     DVG   + 
Sbjct: 190 ---------------------------------------SLLQGYCKSGRWEDVGKVFVE 210

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + +  + P+   +  +I++L K GK   A  +   M + G   NV  YN LI+ +C    
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH---EPWVKH 431
           ++E+  +L++M E G  P   T N++ + L    ++  A+ L+ +M V+G    +P V  
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVT 329

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              +I+ LC  G+  +AF+    M + G + ++V Y+  IGGL+ + +V  A+EL  ++ 
Sbjct: 330 FNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMT 389

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           + G  PD   Y+I+I G CK  +V  AEDL + M  +G+ P +  Y  L+   C+ G ++
Sbjct: 390 SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449

Query: 552 QAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           +A    + M   ++  P DV+ Y+T+I G C AG    A  L   + ++G  P+ +T+  
Sbjct: 450 RARNLFNEM---DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +I    K     AA    + M   G  PD+ VF +LI  + ++       E+++EM
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 4/329 (1%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMT---QIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           S++ ++  L + G  D A +L R M+      C  N   Y  L+  LC     +++  LL
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R M  +G +    T  ++ R LC   +V  A+ L+ +M   G EP V   + L++  CK 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  +  +   +M ++G  PD+V Y+  I  L  + +   A  +   +   G  P+VV Y
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N++I+ +CK   V EA  +  +M  KG+ P V TYN LI G      +D+AM  L  M+ 
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 563 -KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    P+V+T+ ++I GLC  GR   A  +   MEE GC  N +T+  LI GL +  + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
           R A+     M   G++PD F +  LI  F
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGF 407



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 6/256 (2%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           + R R+   +R + ++   + C ++      LI  L  V  V +A  L D++   GL  P
Sbjct: 340 IGRMRQAFQVRAMMEE---TGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL-EP 395

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           ++++Y+ L++  CK   VD  E  L  M+D G   + +   PLL   C  G  ++A ++F
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF 455

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           NE+ ++  +D   +S ++    K G++  A EL++ + D  +  +  T+ ++I+ F K  
Sbjct: 456 NEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            ++ A  +  +MT SGF  D A++D +I G     ++   L+L  EM    I  D +I+S
Sbjct: 516 DMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIS 575

Query: 245 KLITS--CSDEGELTL 258
            L TS   S+EG+  L
Sbjct: 576 TLSTSLVASNEGKALL 591



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEME---EKGCAPNRITFMALITGLCKCDRPRAAL 625
           D ++Y T++  LC  G  D A  L   M       C PN +++  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R M+  G++ D+  +  LI           A E++ EM
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 238/534 (44%), Gaps = 51/534 (9%)

Query: 134  DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK-SRVDKALQL 192
            D  VF +      ++G + +A ++ E+M +  + L+  +  V +    K  ++   A+ +
Sbjct: 597  DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 193  FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
            F +  + G   + A Y+++I  +C+  ++  A  L   M+  G TPD    S +I     
Sbjct: 657  FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 253  EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             GEL                                 D+ + L++ M +           
Sbjct: 717  FGEL---------------------------------DKVWKLIEKMKQ----------- 732

Query: 313  LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                KG + PN+ ++  II  L +  KL  A   F EM   G + +  +Y  L+DG C  
Sbjct: 733  ----KG-LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787

Query: 373  NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
              +  + +   EM      P   T  ++    C+  D+V A  L  +M  +G EP +   
Sbjct: 788  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847

Query: 433  TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            T L+   CK G   +AFR    M+Q G  P++V Y+  I GL     +D A EL  ++  
Sbjct: 848  TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907

Query: 493  HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             G  P++  YN I++GLCK+  + EA  L  E    GL     TY  L++ +CKSG +D+
Sbjct: 908  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967

Query: 553  AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
            A   L+ ML K    P ++T+  L++G C+ G  +D   L N M  KG APN  TF  L+
Sbjct: 968  AQEILTEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 613  TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               C  +  +AA   ++ M  +G++PD   +  L+    +  N   A+ + +EM
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 258/571 (45%), Gaps = 34/571 (5%)

Query: 30   PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM-R 88
            P       + L   G++ EA  +F+++   GL +  + S N  L  L K C+     +  
Sbjct: 598  PRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVD-SCNVYLARLSKDCNKTATAIIV 656

Query: 89   LKEMQDYG--WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
             +E  + G  W    Y +  ++   C  G+ ++A  +   +   G+  + + +S ++  +
Sbjct: 657  FREFPEVGVCWNVASYNI--VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGY 714

Query: 146  SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
             ++GE+DK  +LIE+M    ++ N  T+  +I    +  ++ +A + F +M   G   D 
Sbjct: 715  CRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774

Query: 206  AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +Y  ++ G CK   +  A + + EM    ITPD    + +I+     G++    K   E
Sbjct: 775  IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 266  ------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                  + D+ T T L N   +     G I  A+ +   MI+                  
Sbjct: 835  MLCRGLEPDIITFTELMNGYCKA----GHIKDAFRVHNHMIQA----------------G 874

Query: 320  VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             SPN  ++  +I+ L K+G LD A  L  EM +IG   N+F YN++++GLC S  +EE+ 
Sbjct: 875  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 380  ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L+ E E +G      T  ++    C+  ++  A  ++ +M  +G +P +    +L+   
Sbjct: 935  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994

Query: 440  CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            C HG   +  + L  M+ +G  P+   ++  +        +  A  +++D+C+ G  PD 
Sbjct: 995  CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDG 1054

Query: 500  VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
              Y  ++ G C A+ + EA  LF EM  KG   SV+TY++LI G+ K     +A     +
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114

Query: 560  MLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            M  ++  + D   +    D      RPD  +
Sbjct: 1115 M-RRDGLAADKEIFDFFSDTKYKGKRPDTIV 1144



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 226/506 (44%), Gaps = 24/506 (4%)

Query: 31   GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
             +   +I  +  +G + EA+ L   ++ +G   P+  SY+ ++   C+   +D V   ++
Sbjct: 670  ASYNIVIHFVCQLGRINEAHHLLLLMELKGY-TPDVISYSTVINGYCRFGELDKVWKLIE 728

Query: 91   EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
            +M+  G   + YT   ++ + C   +  +A   F+E+I  G + D  V++ L+  F K G
Sbjct: 729  KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 150  EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            ++  A +    M   +I  +  T+  +I GF +   + +A +LF +M   G   D   + 
Sbjct: 789  DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848

Query: 210  VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWE- 265
             ++ G CK   ++ A ++++ M  +G +P+    + LI     EG+L     L+ E+W+ 
Sbjct: 849  ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908

Query: 266  DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                N  T   NSI+  L  +G+I++A  L+     GE  A             ++ +T 
Sbjct: 909  GLQPNIFTY--NSIVNGLCKSGNIEEAVKLV-----GEFEA-----------AGLNADTV 950

Query: 326  SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            ++  +++   K G++D A  +  EM   G    +  +N L++G C    LE+  +LL  M
Sbjct: 951  TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010

Query: 386  EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
               G  P   T N + +  C R ++  A  + + M  +G EP  K    L+K  C     
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070

Query: 446  MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             EA+    +M  +GF   +  YS  I G    K+   A E+F  +   G   D   ++  
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFF 1130

Query: 506  ISGLCKAQRVAEAEDLFNEMITKGLI 531
                 K +R     D  +E+I   L+
Sbjct: 1131 SDTKYKGKRPDTIVDPIDEIIENYLV 1156


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 174/683 (25%), Positives = 286/683 (41%), Gaps = 86/683 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVV-KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKRE 59
           +A IL  A+    +  L Q ++ + R F  P     L+R L  +GL+E A   F  ++  
Sbjct: 52  IARILITAKMHPQIDHLHQLLLSQHRDFAHPSGFS-LVRTLADLGLLENAISQFRSLRDR 110

Query: 60  GLCVPNNYS-YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
               P   S YN L     K   VD V    K+M         YT               
Sbjct: 111 FPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYT--------------- 155

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
                              F++L+ A  + G ++ A E+ ++M +   + NE +  +L+ 
Sbjct: 156 -------------------FNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVR 196

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+ +       + L D+M  SG   +   Y+ +I  LC   Q   A +L  +M+  G++P
Sbjct: 197 GYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSP 256

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVN-------TMTLLCNSIMRILVSNGSIDQ 291
           D    +  I +    G++ L    I+ D  ++         T+  N ++    S G  ++
Sbjct: 257 DIVTFNCRIAALCKSGQI-LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  +  +M   E ++                   S++I +  L++ GKL  A  +  EM 
Sbjct: 316 ARAIFDSMKNSETLS-----------------LRSYNIWMLGLVRSGKLLEAHLILNEMA 358

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +     N++ YN L+ GLC      ++  +L  M ESG  P   T +++    CRR  ++
Sbjct: 359 EKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKIL 418

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A  ++R+M   G  P +    +L+  L K G+A EA   L  M + G+  D V  +  I
Sbjct: 419 EANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMI 478

Query: 472 GGLIDIKRVDLALELFRDICAHG-----------------------CCPDVVAYNIIISG 508
            GL     +D A+E+   +   G                       C PD + Y  II G
Sbjct: 479 NGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGG 538

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  RV EA+    EMI K L P    ++  I  +CK G +  A   L  M EK+  + 
Sbjct: 539 LCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM-EKKGCNK 597

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
            + TY +LI GL    +  +   L +EM+E+G  PN  T+  +I+ L +  + + A    
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLL 657

Query: 629 RMMKEKGMKPDMFVFVALISAFL 651
             M +KG+ P+++ F  LI AF 
Sbjct: 658 DEMLQKGISPNIYTFRILIGAFF 680



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 243/574 (42%), Gaps = 75/574 (13%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFS---KWGEVDKACELIERMDD 163
           L++   + G  + A+S F  + D    D    S   + F    K   VD    L + M  
Sbjct: 87  LVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAV 146

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             ++    TF +LI    +   ++ A ++FDKM++ G   +     +++ G C+      
Sbjct: 147 ARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSH 206

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI- 282
            + L  EM+ SG  P+    + +I+S   EG+     K + + R+V     +     RI 
Sbjct: 207 GIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIA 266

Query: 283 -LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +G I +A  + + M        +  EM     G   PNT ++++++     +G  +
Sbjct: 267 ALCKSGQILEASRIFRDM-------QIDEEM-----GLPKPNTVTYNLMLEGFCSEGMFE 314

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A ++F  M     + ++  YN  + GL  S +L E++ +L EM E   KP  ++ N   
Sbjct: 315 EARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYN--- 370

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                                           +L+  LCK+G   +A   L  M + G  
Sbjct: 371 --------------------------------ILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD V YS  + G     ++  A  + R++   GC P++   NI++  L K  R +EAEDL
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-------------- 567
              M  +G      T N +ING CK+GN+D+A+  +S M  + S S              
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 568 --------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
                   PD ITY T+I GLC  GR D+A     EM  K  +P+ + F   I   CK  
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +  +A    + M++KG    +  + +LI    SE
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSE 612



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 139/571 (24%), Positives = 259/571 (45%), Gaps = 16/571 (2%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A   +I  L   G   EA  L ++++  GL  P+  ++NC + ALCKS  +       ++
Sbjct: 225 AYNTVISSLCGEGQTVEAEKLVEKMREVGLS-PDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 92  MQ-DYGWGYDK---YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK 147
           MQ D   G  K    T   +L+ +C+ G F++A ++F+ + +   +    ++I ++   +
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVR 343

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G++ +A  ++  M + NI+ N  ++ +L+HG  K      A  +   M +SG A D   
Sbjct: 344 SGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVT 403

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEIWE 265
           Y  ++ G C+  ++  A  +  EM   G  P+    + L+ S   EG  +    + ++  
Sbjct: 404 YSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMN 463

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGE-PIADVGVEMLMIFK-----G 318
           +R      + CN+++  L   G++D+A  ++  M  +G   + ++G   + +F       
Sbjct: 464 ERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P++ ++  II  L K G++D A     EM       +  +++  I   C   +L  +
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSA 583

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + +L+EME+ G   +  T NS+ + L     +     L+ +M+ +G  P V     +I  
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L + GK  +A   L +M+Q+G  P+I  +   IG          A ELF +I    C   
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHK 702

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              Y+ + + L       +A++LF   + + L      Y  LI   CK G +D A   L 
Sbjct: 703 ESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILH 762

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           +M++K+  S D  ++  +ID L   G    A
Sbjct: 763 KMMDKQY-SFDPASFMPVIDELGKRGSKHAA 792



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 8/352 (2%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P T +F+++I+ L + G L+ A  +F +M++ GC  N F    L+ G C +       
Sbjct: 149 VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGI 208

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM  SG  P     N++   LC     V A  LV KMR  G  P +      I  L
Sbjct: 209 DLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAAL 268

Query: 440 CKHGKAMEAFRFLTDMVQEGFL----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           CK G+ +EA R   DM  +  +    P+ V Y+  + G       + A  +F D   +  
Sbjct: 269 CKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSE 327

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
              + +YNI + GL ++ ++ EA  + NEM  K + P++ +YN+L++G CK G    A  
Sbjct: 328 TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARS 387

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            L  M  +ESG +PD +TY+TL+ G C  G+  +A  +  EM + GC PN  T   L+  
Sbjct: 388 ILGLM--RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L K  R   A    +MM E+G   D      +I+      N   A E++  M
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 8/350 (2%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P  S ++++    LK+ ++D  + L+++M         + +N LI  LC    LE + E+
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELC 440
             +M E G KP  F+L  + R  CR       ++L+ +MR  G  P  V +NT +I  LC
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNT-VISSLC 234

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG----CC 496
             G+ +EA + +  M + G  PDIV ++  I  L    ++  A  +FRD+          
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+ V YN+++ G C      EA  +F+ M     + S+ +YN+ + G  +SG + +A L 
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L+ M EK    P++ +Y  L+ GLC  G   DA  +   M E G AP+ +T+  L+ G C
Sbjct: 354 LNEMAEKNI-KPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +   A    R M + G  P+M+    L+ +   E     A ++L+ M
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 2/229 (0%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           +  RVL +++ K  C  S      LI+ LGS   + E   L D++K  G+  PN Y+YN 
Sbjct: 582 SAFRVL-KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI-FPNVYTYNN 639

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           ++  L +   +      L EM   G   + YT   L+  +  +  F  A  +F   +   
Sbjct: 640 IISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLC 699

Query: 132 WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
              E ++S +       GE  KA EL E   D ++ L    +  LI    K  ++D A  
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +  KM    ++ D A +  +I  L K      A +    M       DF
Sbjct: 760 ILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDF 808


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 238/491 (48%), Gaps = 43/491 (8%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS----CSDEGELTLLVKEI 263
           ++ I+  L K    ++A+    +M+  GI P+    + LI      C      +++ K +
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GE 303
                 +T+T+  N+++R L  NG + +A N    +I+                    GE
Sbjct: 116 KLGYQPDTVTV--NTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGE 173

Query: 304 PIADVGVEMLMIFKGT--VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
             A   +++L   +G   V P+   +  II++  KD  +  A  L+ EM       NV  
Sbjct: 174 TRA--ALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVT 231

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N+LI G C   +L+E+  LL EM  +   P  +T N +   LC+  +V  A +++  M 
Sbjct: 232 FNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMI 291

Query: 422 VQGHEPWVKHNT------LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
            QG EP V   T       L+KE+    KA   F  ++     G  P++  YS  I GL 
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEV---NKAKHVFNTIS---LRGVTPNVHSYSVMINGLC 345

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             K VD A++LF+++      P+ V Y+ +I GLCK+ R+++  DL +E+  +G   ++ 
Sbjct: 346 KNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANII 405

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN L+NG CK+  +D+A+  L++M + E   PD+ TYTTL+DGLC  GR  DA  ++ +
Sbjct: 406 TYNSLLNGLCKNHQVDKAIALLTKM-KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +  KG   N   +  +I GLCK      AL     M++ G  PD   +  LISA      
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNK 524

Query: 656 PPLAFEVLKEM 666
              A ++L+EM
Sbjct: 525 NGKAVKLLREM 535



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 246/525 (46%), Gaps = 30/525 (5%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-----FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
             D A+S FN I+    ++ H      F+ +L +  K      A    ++M+   I+   
Sbjct: 32  NLDDAVSSFNHIL---HMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEM 88

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            TF +LI+ F    +++ A  +  K+ K G+  D    + ++ GLC N +++ AL  +  
Sbjct: 89  FTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDH 148

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           +       D      LI      GE      L+++I     V    ++  +I+     + 
Sbjct: 149 VIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDK 208

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +  AY+L   MI  +                + PN  +F+ +I      G+L  A+ L 
Sbjct: 209 LVIDAYDLYSEMIVKK----------------IYPNVVTFNSLIYGFCIVGQLKEAVGLL 252

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM+      NV+ +N LIDGLC    ++++  +L  M + G +P   T  S+       
Sbjct: 253 NEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLV 312

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           ++V  A ++   + ++G  P V   +++I  LCK+    EA +   +M  +   P+ V Y
Sbjct: 313 KEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTY 372

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S+ I GL    R+    +L  +I   G   +++ YN +++GLCK  +V +A  L  +M  
Sbjct: 373 SSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKD 432

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRP 586
           +G+ P ++TY  L++G CK+G +  A      +L K  G P ++  YT +I+GLC  G  
Sbjct: 433 EGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK--GYPLNIRMYTVMINGLCKEGFF 490

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           D+A+ L ++ME+ GC P+ +T+  LI+ L K ++   A+   R M
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 226/474 (47%), Gaps = 30/474 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  +++N L+      C ++     + ++   G+  D  T+  LL+  C +G+  +AL+ 
Sbjct: 86  PEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNF 145

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN-IRLNEKTFCVLIHGFV 181
            + +I   + +D+  +  L+    K GE   A +L+ +++    +R +   +  +I  F 
Sbjct: 146 HDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFC 205

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   V  A  L+ +M       +   ++ +I G C   QL+ A+ L +EM  + + P+  
Sbjct: 206 KDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVY 265

Query: 242 ILSKLITSCSDEGE-------LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             + LI     EGE       L++++K+  E   V   +L+                 Y 
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLM---------------DGYF 310

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L++ + K + + +      +  +G V+PN  S+ ++IN L K+  +D A+ LF+EM    
Sbjct: 311 LVKEVNKAKHVFNT-----ISLRG-VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN 364

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              N   Y++LIDGLC S R+ + ++L+ E+   G      T NS+   LC+   V  A+
Sbjct: 365 MTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAI 424

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+ KM+ +G +P +   T L+  LCK+G+  +A R   D++ +G+  +I  Y+  I GL
Sbjct: 425 ALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
                 D AL L   +  +GC PD V Y  +IS L K  +  +A  L  EMI +
Sbjct: 485 CKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 227/477 (47%), Gaps = 34/477 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+IL+  FS   +++ A  ++ ++     + +  T   L+ G     +V +AL   D +
Sbjct: 90  TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG-ITPDFEILSKLITS-CSDEG 254
            +  F  D   Y  +I GLCK+ +   ALQL  +++G   + PD  + + +I S C D+ 
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 255 EL-------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
            +        ++VK+I+     N +T   NS++      G + +A  LL  M        
Sbjct: 210 VIDAYDLYSEMIVKKIYP----NVVTF--NSLIYGFCIVGQLKEAVGLLNEMSLN----- 258

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                       V+PN  +F+I+I+ L K+G++  A S+   M + G   NV  Y +L+D
Sbjct: 259 -----------NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G      + ++  +   +   G  P   + + M   LC+ + V  A+ L ++M ++   P
Sbjct: 308 GYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP 367

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                + LI  LCK G+  + +  + ++   G   +I+ Y++ + GL    +VD A+ L 
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  PD+  Y  ++ GLCK  R+ +A+ ++ +++ KG   ++  Y ++ING CK 
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM--EEKGCA 602
           G  D+A+  LS+M E     PD +TY TLI  L    +   A+ L  EM   E  C+
Sbjct: 488 GFFDEALSLLSQM-EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCS 543



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 9/332 (2%)

Query: 340 LDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           LD A+S F  +  +      +F +N ++  L   N  + +    ++ME  G +P  FT N
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            +  C      +  A ++V K+   G++P  V  NTLL + LC +GK  EA  F   +++
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLL-RGLCLNGKVKEALNFHDHVIR 151

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC---PDVVAYNIIISGLCKAQR 514
           + F  D V Y   I GL        AL+L R I   G     PDV+ Y  II   CK + 
Sbjct: 152 KRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V +A DL++EMI K + P+V T+N LI G+C  G + +A+  L+ M    + +P+V T+ 
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM-SLNNVNPNVYTFN 268

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LIDGLC  G    A  + + M ++G  PN +T+ +L+ G         A   F  +  +
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+ P++  +  +I+          A ++ KEM
Sbjct: 329 GVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 248/579 (42%), Gaps = 80/579 (13%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P   S+  LL  L K      V     +M+  G   D  TL  LL   CN  +  + L+
Sbjct: 93  TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           V   I+  G++ + V                                  T+  LI G   
Sbjct: 153 VMAGILRRGYIPDIV----------------------------------TYTTLIKGLCM 178

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + R+ KA  LF +M K G   +A  Y  ++ GLC+   + +AL+L+ EM           
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IK 301
              +I+        ++++  + +DR                      D+A +L + M ++
Sbjct: 239 KPVVIS-------YSIIIDALCKDRRE--------------------DEARDLFEEMKVQ 271

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G                 ++P   S+  +I+     GK + A  LF EM   G   NV  
Sbjct: 272 G-----------------MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LID LC   ++ E+ +LL  M + G  P   T NS+    C   D+  A  L   M 
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G EP V   T+LI   CK  K  EA +    M+Q G  PD+  Y A + GL    +V 
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A +LF  +  +G   D+  Y I ++GLCK   + EA +LFN++ +  +   +  +N LI
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLI 494

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +G CK+G ++ A     + L +E   PDV+TY  +I   C  G+   A +L+ +ME+ GC
Sbjct: 495 DGLCKAGKLETAWELFEK-LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
            P++IT+  LI G  +  +    +    MM ++ +  D+
Sbjct: 554 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 233/529 (44%), Gaps = 44/529 (8%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ LL   +K     +   L  +M    I  +  T  +L++     +RV + L +   + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G+  D   Y  +I GLC   ++  A  L++ M+  G TP                   
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP------------------- 199

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                       N +T    ++M+ L   G+I  A  L Q M+    +  +  + ++I  
Sbjct: 200 ------------NAITY--GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI-- 243

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                   S+ III+ L KD + D A  LF EM   G    V  Y +LI G C   + EE
Sbjct: 244 --------SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEE 295

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +  L  EM   G +P   T N +   LC+   V+ A +L+  M  +G  P +     LI+
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIE 355

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C  G    A      M  +G  PD++CY+  I G     +V+ A++L+  +   G  P
Sbjct: 356 GFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DV  Y  +++GL +  +V +A+ LF  M   G+   +  Y + +NG CK+G + +AM   
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           ++ L+  +   D+  +  LIDGLC AG+ + A  L+ ++ ++   P+ +T+  +I   C+
Sbjct: 476 NK-LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 534

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   A + F+ M++ G  PD   +  LI  F          E+L  M
Sbjct: 535 GGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 176/374 (47%), Gaps = 23/374 (6%)

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             N +  QA+     M+   P                +P  SSF  +++ L K       
Sbjct: 72  TGNITATQAFQFFHLMMYSNP----------------TPPLSSFTHLLSGLAKIKHYSQV 115

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L+ +M   G   +    N L++ LCN NR+ E   ++  +   G+ P   T  ++ + 
Sbjct: 116 FYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKG 175

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG---- 459
           LC    +  A  L  +M+  G  P       L+K LC+ G    A +   +M+ +     
Sbjct: 176 LCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYG 235

Query: 460 --FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
             F P ++ YS  I  L   +R D A +LF ++   G  P V++Y  +I G C   +  E
Sbjct: 236 INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEE 295

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+ LFNEM+ +G+ P+V T+N+LI+  CK G + +A   L  M+++    P+++TY +LI
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR-GIVPNLLTYNSLI 354

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           +G C+ G  + A  L+  M  KGC P+ I +  LI G CK  +   A+  +  M + G +
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414

Query: 638 PDMFVFVALISAFL 651
           PD+  + AL++   
Sbjct: 415 PDVKTYGALLTGLF 428



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 15/340 (4%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE-- 376
           T SP   S +   ++ +    L+++   F          ++FL+N      C +  +   
Sbjct: 25  THSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHN------CKTGNITAT 78

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++++    M  S   P   +   +   L + +       L  +MR+ G  P      +L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC   +  E    +  +++ G++PDIV Y+  I GL    R+  A  LF  +   GC 
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI------PSVATYNLLINGWCKSGNI 550
           P+ + Y  ++ GLC+   ++ A  L  EM+    +      P V +Y+++I+  CK    
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A      M + +  +P VI+YT+LI G C  G+ ++A  L+NEM  +G  PN +TF  
Sbjct: 259 DEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNV 317

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           LI  LCK  +   A     +M ++G+ P++  + +LI  F
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 357



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 205/471 (43%), Gaps = 36/471 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            L  L+ CL +V  V E   +   + R G  +P+  +Y  L++ LC    +    +    
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGY-IPDIVTYTTLIKGLCMEHRISKAALLFTR 191

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID----HGWVDEHV---FSILLVA 144
           MQ  G   +  T   L++  C +G    AL +  E+++    +G   + V   +SI++ A
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K    D+A +L E M    +     ++  LIHGF    + ++A +LF++M   G   +
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              ++V+I  LCK  ++  A  L   M   GI P+    + LI      G+L    +E++
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN-SARELF 370

Query: 265 E-------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                   + DV   T+L N   +       +++A  L   M++      VG        
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCK----TSKVEEAMKLYNGMLQ------VGKR------ 414

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  ++  ++  L + GK+  A  LF  M   G   ++++Y   ++GLC +  L E
Sbjct: 415 ----PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 470

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + EL  +++    K      N +   LC+   +  A  L  K+  +  +P V    ++I 
Sbjct: 471 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           E C+ G+ ++A      M + G  PD + Y+  I G  + K+++  +EL  
Sbjct: 531 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 193/463 (41%), Gaps = 57/463 (12%)

Query: 9   RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY- 67
            RI+   +L   + K  C  +    G L++ L   G +  A  L  ++  +      N+ 
Sbjct: 180 HRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK 239

Query: 68  ----SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
               SY+ +++ALCK    D      +EM+  G      + T L+  +C  G++++A  +
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL 299

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           FNE+++ G     V F++L+    K G+V +A +L+E M    I  N  T+  LI GF  
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              ++ A +LF  M   G   D   Y V+I G CK  ++E A++LY+ M   G  PD + 
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IK 301
              L+T                                  L   G +  A  L   M + 
Sbjct: 420 YGALLTG---------------------------------LFQGGKVGDAKKLFGVMKVY 446

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           G P  D+ +                + I +N L K+G L  A+ LF ++       ++  
Sbjct: 447 GIP-GDLYI----------------YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +N LIDGLC + +LE ++EL  ++ +   +P   T N M    CR   VV A  L +KM 
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
             G  P       LI+   +  K  +    L  MVQ     D+
Sbjct: 550 KNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 116/262 (44%), Gaps = 7/262 (2%)

Query: 399 SMFRCLCRRQDVVG--ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           SMF   C+  ++    A      M      P +   T L+  L K     + F     M 
Sbjct: 64  SMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD    +  +  L ++ RV   L +   I   G  PD+V Y  +I GLC   R++
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES-----GSPDVI 571
           +A  LF  M   G  P+  TY  L+ G C++GNI  A+     ML   S       P VI
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           +Y+ +ID LC   R D+A  L+ EM+ +G  P  I++ +LI G C   +   A   F  M
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 632 KEKGMKPDMFVFVALISAFLSE 653
             +G++P++  F  LI     E
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKE 325



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 2/199 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VEEA  L++ + + G   P+  +Y  LL  L +   V   +     M+ YG   D Y   
Sbjct: 398 VEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 456

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
             L   C +G   +A+ +FN++  +   +D   F+ L+    K G+++ A EL E++   
Sbjct: 457 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 516

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            ++ +  T+ ++IH F +  +V KA  LF KM K+G   D   Y  +I G  ++K+LE  
Sbjct: 517 ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKV 576

Query: 225 LQLYSEMKGSGITPDFEIL 243
           ++L   M    ++ D  IL
Sbjct: 577 VELLHMMVQRDVSLDVNIL 595


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 251/527 (47%), Gaps = 28/527 (5%)

Query: 130 HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           H   D   ++IL+     +G+ + A  L + M          T+ +L++   ++ R+ +A
Sbjct: 256 HVVPDACSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEA 315

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             LFD+M ++G   +   ++V+I G  K  Q+E A    +EMK  G+ PD    + L   
Sbjct: 316 RMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAG 375

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI---LVSNGSIDQAYNLLQAMIKGEPIA 306
               G+  L V +  +  ++    L  + I  +   L  +G +D A+ LL + I+     
Sbjct: 376 AYKFGKAALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIE----- 430

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                     KG V  + S F+ +I    K+G  + A  L++ M ++G   +    N LI
Sbjct: 431 ----------KG-VQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLI 479

Query: 367 DGLCNSNRLEESYELLREMEESGF-KPTHFT--LNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            GLCN  RL+++   L  M   G+     FT  L+S FR      DV+GAL     M++ 
Sbjct: 480 MGLCNRGRLDQARLFLEYMVRMGYCVIASFTIYLDSSFRA----GDVLGALKCWDDMKIV 535

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P     +  +  LC+     EA+    +M++ G +P+   Y++ I        V  A
Sbjct: 536 GLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEA 595

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
           L+L + +   G  PD+   NI+I G C+   +  A +LF  M + GL P V TYN ++N 
Sbjct: 596 LKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNA 655

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +C+S +I+ AM+ +++ML  +   PD+ TY   +  LC     + A+ML +E+    CAP
Sbjct: 656 YCRSKDINGAMIFMNKML-ADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAP 714

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           N +T+  L+ G+C     RA ++  R++K    +P+      L S F
Sbjct: 715 NSVTYNTLMDGICSDVLDRAMILTGRLIK-LAFQPNTVTINILFSHF 760



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 245/574 (42%), Gaps = 33/574 (5%)

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFS-KWGEVDKACELIERMDDCNI 166
           L  +  +G  D+AL V   +   G          L+    + GEV  A ++ E M     
Sbjct: 163 LHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGP 222

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           R N   F  +I G   +  V  +  L   M +     DA  Y++++ G C   Q E A  
Sbjct: 223 RPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFN 282

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE-DRDVNTMTLLCNSIMRI 282
           L+ EM+ +G  P     + L+     EG   E  +L  E+ +   +VNT+T   N ++  
Sbjct: 283 LFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITF--NVLIDG 340

Query: 283 LVSNGSIDQA------------------YNLLQAMIKGEPIADVGV----EMLMIFKGTV 320
               G ++ A                  +N+L A       A + V    ++  +F   +
Sbjct: 341 YAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQL 400

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           S  T   D++I  L  DG+LD A  L     + G   +V  +N LI         EE++E
Sbjct: 401 S--TDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFE 458

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L + M + G  P+  TLN +   LC R  +  A   +  M   G+   +   T+ +    
Sbjct: 459 LYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGY-CVIASFTIYLDSSF 517

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G  + A +   DM   G  PD V +SA + GL  +  +D A   F ++   G  P+  
Sbjct: 518 RAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNF 577

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +IS  C+A  V+EA  L  +M   GL+P + T N+LI+G+C+ G ++ A      M
Sbjct: 578 TYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGM 637

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                 +PDV+TY T+++  C +   + A++  N+M   GC P+  T+   +  LC    
Sbjct: 638 YSI-GLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHL 696

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
              A++    +      P+   +  L+    S++
Sbjct: 697 LNRAMMLLDELAATDCAPNSVTYNTLMDGICSDV 730



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 251/591 (42%), Gaps = 60/591 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V  A  +F+++   G   PN   +N ++  LC    V +    L  M  +    D  +
Sbjct: 205 GEVRAAWKVFEEMAARGP-RPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACS 263

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L++ +C  GQ + A ++F+E+   G     V ++IL+    + G + +A  L + M 
Sbjct: 264 YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              + +N  TF VLI G+ K  +++ A     +M   G   D   ++++  G  K  +  
Sbjct: 324 QAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAA 383

Query: 223 MAL---QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           + +   Q   EM GS ++ D              G   L+ +  W+ R  +   LLC++I
Sbjct: 384 LFVLDQQQLHEMFGSQLSTD--------------GIDMLICRLCWDGRLDDAWELLCSAI 429

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF-KGTVSPNTSSFDIIINTLLKDG 338
            + +  + S    +N L A    E   +   E+     K  ++P++S+ + +I  L   G
Sbjct: 430 EKGVQVSVS---GFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRG 486

Query: 339 KLDLA----------------------------------LSLFREMTQIGCMQNVFLYNN 364
           +LD A                                  L  + +M  +G   +   ++ 
Sbjct: 487 RLDQARLFLEYMVRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSA 546

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            ++GLC  + L+E+Y    EM   G  P +FT NS+    CR  +V  AL L +KMR  G
Sbjct: 547 YVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSG 606

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P +    +LI   C+ G    A      M   G  PD+V Y+  +      K ++ A+
Sbjct: 607 LVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAM 666

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
                + A GC PD+  YNI +  LC    +  A  L +E+      P+  TYN L++G 
Sbjct: 667 IFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGI 726

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           C S  +D+AM+   R++ K +  P+ +T   L    C  G    A ++W E
Sbjct: 727 C-SDVLDRAMILTGRLI-KLAFQPNTVTINILFSHFCKNGFGKRA-LVWAE 774



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 204/498 (40%), Gaps = 66/498 (13%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +H F+     D+AL +  ++ ++G     +    ++  L +  ++  A +++ EM   G 
Sbjct: 163 LHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGP 222

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P+  I + +I      G    LV+                      VS G       LL
Sbjct: 223 RPNLAIFNAMIFGLCHRG----LVR----------------------VSGG-------LL 249

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M +                  V P+  S++I++      G+ + A +LF EM   GC 
Sbjct: 250 GVMGRFH----------------VVPDACSYNILMKGHCLYGQAEDAFNLFDEMRVTGCC 293

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             +  YN L++ LC   R+ E+  L  EM ++G +    T N +     +   +  A   
Sbjct: 294 PTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMA 353

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M+  G  P      +L     K GKA     F+ D  Q   L ++     +  G ID
Sbjct: 354 CAEMKAMGLMPDCCTFNILSAGAYKFGKAA---LFVLDQQQ---LHEMFGSQLSTDG-ID 406

Query: 477 I--------KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           +         R+D A EL       G    V  +N +I+   K     EA +L+  M   
Sbjct: 407 MLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKL 466

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL PS +T N LI G C  G +DQA L L  M+    G   + ++T  +D    AG    
Sbjct: 467 GLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRM--GYCVIASFTIYLDSSFRAGDVLG 524

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+  W++M+  G  P+ + F A + GLC+ D    A   F  M  +G+ P+ F + +LIS
Sbjct: 525 ALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLIS 584

Query: 649 AFLSELNPPLAFEVLKEM 666
           AF    N   A ++ ++M
Sbjct: 585 AFCRAGNVSEALKLEQKM 602



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 24/314 (7%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L +LI  L + G +++A +  + + R G CV    S+   L++  ++  V      
Sbjct: 471 SSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIA--SFTIYLDSSFRAGDVLGALKC 528

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
             +M+  G   D    +  +   C     D+A + F E+I  G V +   ++ L+ AF +
Sbjct: 529 WDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCR 588

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G V +A +L ++M    +  +  T  +LI GF ++  ++ A  LF  M   G   D   
Sbjct: 589 AGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVT 648

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIW 264
           Y+ ++   C++K +  A+   ++M   G  PD    +  + S CS+       +L+ E+ 
Sbjct: 649 YNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDEL- 707

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
              D    ++  N++M  + S+  +D+A  L   +IK            + F+    PNT
Sbjct: 708 AATDCAPNSVTYNTLMDGICSD-VLDRAMILTGRLIK------------LAFQ----PNT 750

Query: 325 SSFDIIINTLLKDG 338
            + +I+ +   K+G
Sbjct: 751 VTINILFSHFCKNG 764


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/587 (25%), Positives = 256/587 (43%), Gaps = 25/587 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+  S N L EAL  + +V   +M ++++   G+  D  +L   ++  C  G  ++A+
Sbjct: 120 CTPDPISSNMLFEALLDAKAVRAAKM-VRDIA--GFIPDSASLEQYVKCLCGVGFIEEAI 176

Query: 122 SVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR--LNEKTFCVLIH 178
            V+ ++ + G  +     + +L    K G+ +   E  + M         N +T   LI 
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            F    +V +  +L ++  K+G       Y+ +I G C+ K      ++   M      P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296

Query: 239 DFEILSKLITS-CSDEGEL-TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
                 ++I   C +E  L    V    +DR      ++  +++  L   GS  +A  L 
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M+      D G++          PN  +++ +++  LK G  + A  L+ EM   G  
Sbjct: 357 FEMM------DKGMQ----------PNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG 400

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
                 N +I  LC+  + +E++E+ ++M E+G +    T NS+ R  C+   V   +NL
Sbjct: 401 TTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNL 460

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + ++  Q  +P V    LLI + CK G    A R L DM  +G  P+   Y   + G + 
Sbjct: 461 LNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLK 520

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
               +   EL+ + C  G        N IIS LC   +  EA ++F +M   G+     T
Sbjct: 521 SGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAIT 580

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI G+CK G + ++M  L+ ++  +   P   +Y +LI  LC  G  + A  LW +M
Sbjct: 581 YNSLIRGFCKEGKVGKSMNLLNELV-AQGLQPSASSYASLIIQLCQNGDAESAKRLWGDM 639

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
             KG  P+      LI+GLCK  R    +     M E  +KP    F
Sbjct: 640 VSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAF 686



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 235/533 (44%), Gaps = 22/533 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           ++CL  VG +EEA  ++ Q+K  G+ + +  + N +L    K+   +L+    +EM   G
Sbjct: 163 VKCLCGVGFIEEAIEVYFQLKEAGIRI-SIVACNSILSGCLKAGKTELLFEFYQEMIKAG 221

Query: 97  WGYDKYTLTP--LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
              D  T T   L+Q +C+SGQ  +   + N+ +  G       ++ L+  F +      
Sbjct: 222 TASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYAS 281

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             E++  M   N      T+  +I+G  K     +A ++F+ +   G+A D  MY  +I 
Sbjct: 282 MSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIH 341

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNT 271
           GLC+      A +L+ EM   G+ P+    + ++      G+     +   E  ++   T
Sbjct: 342 GLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGT 401

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            T+ CN I+  L S G  D+A+ + + M      ++ G++   I          +++ +I
Sbjct: 402 TTVTCNKIISELCSRGKSDEAFEVFKKM------SETGIQADAI----------TYNSLI 445

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
               K+GK+D  ++L  E+       +V LY  LI   C     E +  LL +M   G  
Sbjct: 446 RGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLH 505

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  +T ++M     +  D      L  +   +G+         +I ELC  GK+ EA   
Sbjct: 506 PNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEM 565

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M + G   D + Y++ I G     +V  ++ L  ++ A G  P   +Y  +I  LC+
Sbjct: 566 FKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQ 625

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
                 A+ L+ +M++KG+ P       LI+G CK G   + M  L  MLE +
Sbjct: 626 NGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENK 678



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 220/512 (42%), Gaps = 63/512 (12%)

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
           +GF  D+A  +  +  LC    +E A+++Y ++K +GI       + +++ C   G+  L
Sbjct: 150 AGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTEL 209

Query: 259 LVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-----GEPIA 306
           L  E +++        D NT T+ C  +++    +G + + Y LL   +K     G P  
Sbjct: 210 LF-EFYQEMIKAGTASDANTETVGC--LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTY 266

Query: 307 DVGVEMLMIFKGTVS--------------PNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           +  +      K   S              P   ++  IIN L K+ +   A  +F ++  
Sbjct: 267 NKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKD 326

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +  +Y  +I GLC      E+ +L  EM + G +P  +T N+M     +  D   
Sbjct: 327 RGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFER 386

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L  +M  +G+         +I ELC  GK+ EAF     M + G   D + Y++ I 
Sbjct: 387 ACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIR 446

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G     +VD  + L  ++ A    P V  Y ++I   CK      A+ L  +M +KGL P
Sbjct: 447 GFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHP 506

Query: 533 SVATYNLLINGWCKSGNIDQ------------------------AMLC-------LSRML 561
           +  TY+ +++G  KSG+ +                         + LC        S M 
Sbjct: 507 NAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMF 566

Query: 562 EK--ESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           +K  E+G   D ITY +LI G C  G+   ++ L NE+  +G  P+  ++ +LI  LC+ 
Sbjct: 567 KKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQN 626

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
               +A   +  M  KG++P   +   LIS  
Sbjct: 627 GDAESAKRLWGDMVSKGIEPHANLREHLISGL 658



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 145/335 (43%), Gaps = 6/335 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  S +++   LL D K   A  + R++   G + +       +  LC    +EE+ E
Sbjct: 121 TPDPISSNMLFEALL-DAKAVRAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAIE 177

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL--LIKE 438
           +  +++E+G + +    NS+     +           ++M   G        T+  LI+ 
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQA 237

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C  G+    +  L   ++ G  P    Y+  I G    K      E+   + A    P 
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +  Y  II+GLCK +   EA  +FN++  +G  P    Y  +I+G C+ G+  +A     
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWF 357

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M++K    P+  TY T++ G   +G  + A  L+NEM  KG     +T   +I+ LC  
Sbjct: 358 EMMDK-GMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            +   A   F+ M E G++ D   + +LI  F  E
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKE 451



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 9/329 (2%)

Query: 342 LALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           L+L  F+ + T   C  +    N L + L ++  +  + +++R++  +GF P   +L   
Sbjct: 106 LSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAVRAA-KMVRDI--AGFIPDSASLEQY 162

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            +CLC    +  A+ +  +++  G    +     ++    K GK    F F  +M++ G 
Sbjct: 163 VKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGT 222

Query: 461 LPDIVCYSAA--IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             D    +    I    D  +V    EL       G  P    YN +I+G C+A+  A  
Sbjct: 223 ASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASM 282

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLI 577
            ++ + MI +  +P++ TY  +ING CK+    +A    + +  K+ G +PD + YTT+I
Sbjct: 283 SEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL--KDRGYAPDRVMYTTMI 340

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
            GLC  G   +A  LW EM +KG  PN  T+  ++ G  K      A   +  M  KG  
Sbjct: 341 HGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG 400

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
                   +IS   S      AFEV K+M
Sbjct: 401 TTTVTCNKIISELCSRGKSDEAFEVFKKM 429


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 215/440 (48%), Gaps = 34/440 (7%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           FV   R     + +       +A +   Y +++ G CK  + + AL+L  EMK +G+ P+
Sbjct: 5   FVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 240 FEILSKLITSCSDEGELT---LLVKEIWED--RDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             I + +I      G+++   L  + I ED   +V T ++L ++    L  +G   +AY 
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSILVDA----LCKSGQPHEAYG 120

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+  M+K               KG  SPN  +++ +I+   K  +LD  L L +EM+Q G
Sbjct: 121 LVTEMVK---------------KG-CSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRG 164

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD--VVG 412
           C  +V  Y  ++D  C +N ++E+Y LL  +E    K    T NS+F  L   +      
Sbjct: 165 CRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTE 220

Query: 413 ALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           AL+L+ KM  +G  P  V + T+L+  LCK+ +  EA++ L  M  +G   D V Y   +
Sbjct: 221 ALSLLEKMIQEGTRPNQVNYRTVLLM-LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILV 279

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
                  R   +LEL   +   G   D    N++I   CKA  + EA  LF  M  +G I
Sbjct: 280 VAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSI 339

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           PS  TYN LI  +CK+   D A+  L +M++ +   P+VITY ++I   C   R ++A  
Sbjct: 340 PSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADF-KPNVITYNSIIKSFCREQREEEARG 398

Query: 592 LWNEMEEKGCAPNRITFMAL 611
           ++  M + GC P+R+++  L
Sbjct: 399 IFQMMVDSGCFPDRVSYTTL 418



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 164/355 (46%), Gaps = 20/355 (5%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN      II  L   GK+  AL  FR + +  C  NV+ Y+ L+D LC S +  E+Y
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-DCAPNVYTYSILVDALCKSGQPHEAY 119

Query: 380 ELLREMEESGFKPTHFTLNSM---FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            L+ EM + G  P   T N++   FR L R  +V   L L+++M  +G    V   T+++
Sbjct: 120 GLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEV---LMLLKEMSQRGCRADVITYTMIL 176

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK--RVDLALELFRDICAHG 494
              CK+    EA+R L  + +     ++V Y++    L   +  R   AL L   +   G
Sbjct: 177 DIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEG 232

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+ V Y  ++  LCK  R+ EA  +   M ++G      +Y +L+  +  +G    ++
Sbjct: 233 TRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSL 292

Query: 555 LCLSRMLEKESGSP---DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             L RML    GS    D  T   +I   C AG   +A  L+  M ++G  P+ +T+  L
Sbjct: 293 ELLGRML----GSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTL 348

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I   CK  +P  A+     M +   KP++  + ++I +F  E     A  + + M
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMM 403



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 39/344 (11%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   Y  L+ G C +   +++ ELL EM+ +G +P      ++ R LC    V  AL   
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 418 RKMRVQGHE--PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           R++   G +  P V   ++L+  LCK G+  EA+  +T+MV++G  P++V Y+A I G  
Sbjct: 89  RRI---GEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFR 145

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK------------------------ 511
            ++R+D  L L +++   GC  DV+ Y +I+   CK                        
Sbjct: 146 KLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNS 205

Query: 512 ---------AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
                      R  EA  L  +MI +G  P+   Y  ++   CK+  +D+A   L  M  
Sbjct: 206 LFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS 265

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           +   + DV +Y  L+     AGR  D++ L   M   G   +  T   +I   CK     
Sbjct: 266 QGCKTDDV-SYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLH 324

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A   F+ M ++G  P    +  LI AF     P  A ++L +M
Sbjct: 325 EAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 24/396 (6%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  SY  L++  CK+         L EM+  G   +    T +++  C +G+  +AL  F
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
             I +    + + +SIL+ A  K G+  +A  L+  M       N  T+  LI GF K  
Sbjct: 89  RRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLE 148

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R+D+ L L  +M++ G  +D   Y +I+   CKN  ++ A +L + ++   +     + +
Sbjct: 149 RLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFT 208

Query: 245 KLITSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-K 301
            L T+  D     L+LL K I E    N +     +++ +L  N  +D+AY +L +M  +
Sbjct: 209 ALSTAEGDRTTEALSLLEKMIQEGTRPNQVNY--RTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 302 GEPIADVGVEMLMIFKGTVSP------------------NTSSFDIIINTLLKDGKLDLA 343
           G    DV  ++L++   +                     +T + +++I+   K G L  A
Sbjct: 267 GCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LF+ M Q G + +   YN LI   C + + + + +LL +M ++ FKP   T NS+ + 
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 404 LCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKE 438
            CR Q    A  + + M   G  P  V + TL I +
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTLKISK 422



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 2/193 (1%)

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +D KR     E +R         + V+Y I++ G CKA    +A +L +EM + G+ P+
Sbjct: 5   FVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPN 64

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  +  +I G C +G + QA+L   R+   E  +P+V TY+ L+D LC +G+P +A  L 
Sbjct: 65  VVIHTTIIRGLCTAGKVSQALLHFRRI--GEDCAPNVYTYSILVDALCKSGQPHEAYGLV 122

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM +KGC+PN +T+ ALI G  K +R    L+  + M ++G + D+  +  ++  F   
Sbjct: 123 TEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKN 182

Query: 654 LNPPLAFEVLKEM 666
            +   A+ +L  +
Sbjct: 183 NSIDEAYRLLNAL 195



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 164/370 (44%), Gaps = 27/370 (7%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR L + G V +A + F ++  +  C PN Y+Y+ L++ALCKS         + EM   
Sbjct: 71  IIRGLCTAGKVSQALLHFRRIGED--CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKK 128

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+  +    + D+ L +  E+   G   D   ++++L  F K   +D+A
Sbjct: 129 GCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA 188

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  ++  N+      F  L     +  R  +AL L +KM + G   +   Y  ++  
Sbjct: 189 YRLLNALEKRNVVTYNSLFTAL--STAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLM 246

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVN 270
           LCKN +L+ A Q+   M   G   D      L+ + +  G     L LL + +     ++
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILD 306

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T T+  N ++      G + +A+ L ++M +               +G++ P+  +++ +
Sbjct: 307 TKTM--NVVIHKFCKAGDLHEAHQLFKSMCQ---------------RGSI-PSNVTYNTL 348

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I    K  + D A+ L  +M Q     NV  YN++I   C   R EE+  + + M +SG 
Sbjct: 349 IGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGC 408

Query: 391 KPTHFTLNSM 400
            P   +  ++
Sbjct: 409 FPDRVSYTTL 418


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 234/512 (45%), Gaps = 52/512 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ ++ +  K GEV +A E+++ M       N+ ++ VL++G   K   D+A +L ++M
Sbjct: 209 TFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM 268

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           +  G    A  Y+ +I G CK +  E A  L  EM G G  P                  
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP------------------ 310

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                            +  N+IM  L   G +  A   L  M+          E LM  
Sbjct: 311 ---------------TVVTYNTIMYSLCRLGRVSDARRYLDVMVN---------EDLM-- 344

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  S++ +I    + G    AL LF E+     + +V  YN LIDG C +  L+
Sbjct: 345 -----PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD 399

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLL 435
            +  +  +M + G  P   T   + R  C+  ++  A  L  +M  +G +P  + + T +
Sbjct: 400 IAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRI 459

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           + EL K G   +AF    +M  EGF PD++ Y+  I GL  +   D A EL + +   G 
Sbjct: 460 VGEL-KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD V Y  II     +  + +AE++F++M+ KG+ PSV TY +LI+ +   G +D A  
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M +K   SP+VITY  LI GLC     D A  L+ EME KG +PN+ T+  LI   
Sbjct: 579 YFDEMQDK-GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                 + AL  ++ M ++ +KPD     AL+
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 226/512 (44%), Gaps = 85/512 (16%)

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           + D++I    K   LE  L ++ +M  +G+ PD    ++++    D+     +V E+ E 
Sbjct: 139 LLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKS----MVNEVEE- 193

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             V ++ + C     I+  N  +D          +GE    V V  +M   G   PN  S
Sbjct: 194 --VYSVMIKCQIRPTIVTFNTMMDSRCK------EGEVGRAVEVLDVMRMFGC-DPNDVS 244

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +++++N L   G+ D A  L  +M+ +G   +   YN LI G C     EE+ +L REM 
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA 445
             G  PT  T N++   LCR   V  A   +  M  +   P  V +NTL I    + G  
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL-IYGYSRLGNF 363

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA    +++  +  +P +V Y+  I G      +D+A  +  D+  HG CPDVV + I+
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGL----------------------------------- 530
           + G C+   +  A++LF+EM+++GL                                   
Sbjct: 424 VRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRM------------------------------ 560
            P + TYN+LING CK GN D A   + +M                              
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE 543

Query: 561 ----LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
               + K+   P V+TYT LI    + GR D A   ++EM++KG +PN IT+ ALI GLC
Sbjct: 544 VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLC 603

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           K +    A   F  M+ KG+ P+ + +  LI+
Sbjct: 604 KENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 184/376 (48%), Gaps = 17/376 (4%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN ++++L     +++   +   MIK +                + P   +F+ ++++  
Sbjct: 175 CNRVLKLLKDKSMVNEVEEVYSVMIKCQ----------------IRPTIVTFNTMMDSRC 218

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G++  A+ +   M   GC  N   YN L++GL      + + EL+ +M   G K +  
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N + R  C+++    A +L R+M  +G  P V     ++  LC+ G+  +A R+L  M
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V E  +PD+V Y+  I G   +     AL LF ++ +    P VV YN +I G C+   +
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A+ + ++MI  GL P V T+ +L+ G+C+ GN+  A      ML +    PD I YTT
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR-GLKPDCIAYTT 457

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            I G    G P  A  +  EM+ +G  P+ IT+  LI GLCK      A    + M+ +G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 636 MKPDMFVFVALISAFL 651
           + PD   + ++I A L
Sbjct: 518 IVPDHVTYTSIIHAHL 533



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 187/392 (47%), Gaps = 6/392 (1%)

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS---FDIIINTL 334
           +I+ IL  NG +  AY +++  I  E   D GV  +++  G    +  S    D++I   
Sbjct: 90  AILDILAKNGFMKPAYWVMEKAI--EVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVF 147

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   L+  L +F +M   G + +V   N ++  L + + + E  E+   M +   +PT 
Sbjct: 148 AKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTI 207

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N+M    C+  +V  A+ ++  MR+ G +P      +L+  L   G+   A   +  
Sbjct: 208 VTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQ 267

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G       Y+  I G    +  + A +L R++   G  P VV YN I+  LC+  R
Sbjct: 268 MSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGR 327

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           V++A    + M+ + L+P + +YN LI G+ + GN  +A+L  S  L  ++  P V+TY 
Sbjct: 328 VSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSE-LRSKNLVPSVVTYN 386

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TLIDG C  G  D A  + ++M + G  P+ +TF  L+ G C+      A   F  M  +
Sbjct: 387 TLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR 446

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G+KPD   +   I   L   NP  AF + +EM
Sbjct: 447 GLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 212/500 (42%), Gaps = 54/500 (10%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN+ SYN L+  L      D  +  +++M   G     +T  PL++ +C    F++A 
Sbjct: 238 CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +  E++  G +   V ++ ++ +  + G V  A   ++ M + ++  +  ++  LI+G+
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +     +AL LF ++           Y+ +I G C+   L++A  +  +M   G+ PD 
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDV 417

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              + L+      G L +  KE++++     +   C            I     ++  + 
Sbjct: 418 VTFTILVRGFCQMGNLPM-AKELFDEMLSRGLKPDC------------IAYTTRIVGELK 464

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            G P    G++  M  +G   P+  +++++IN L K G  D A  L ++M   G + +  
Sbjct: 465 LGNPSKAFGMKEEMKAEG-FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHV 523

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y ++I     S  L ++ E+  +M + G  P+  T                        
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY----------------------- 560

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                       T+LI      G+   A ++  +M  +G  P+++ Y+A I GL     +
Sbjct: 561 ------------TVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMM 608

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D+A  LF ++ + G  P+   Y I+I+     Q   +A  L+ +M+ + + P   T++ L
Sbjct: 609 DVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSAL 668

Query: 541 INGWCKSGNIDQAMLCLSRM 560
           +    K    D  +L + R+
Sbjct: 669 MKHLSK----DYKLLAVLRL 684



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 187/432 (43%), Gaps = 28/432 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++  L  +G V +A    D +  E L +P+  SYN L+    +  +     +   E++  
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDL-MPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK 376

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
                  T   L+   C +G  D A  + +++I HG   + V F+IL+  F + G +  A
Sbjct: 377 NLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMA 436

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL + M    ++ +   +   I G +K     KA  + ++M   GF  D   Y+V+I G
Sbjct: 437 KELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLING 496

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNT 271
           LCK    + A +L  +M+  GI PD    + +I +    G L    +E++ D   + ++ 
Sbjct: 497 LCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG-LLRKAEEVFSDMLKKGIHP 555

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +    ++      G +D A      M       D GV          SPN  +++ +I
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEM------QDKGV----------SPNVITYNALI 599

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L K+  +D+A +LF EM   G   N + Y  LI+   N    +++ +L ++M +   K
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNL--VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           P   T +++ + L +   ++  L L  +    V+ +  W+    + ++E     K    F
Sbjct: 660 PDSCTHSALMKHLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEE----SKNNSHF 715

Query: 450 RFLTDMVQEGFL 461
           R +    + GFL
Sbjct: 716 RAIHVFEKGGFL 727



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 4/237 (1%)

Query: 28  MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + +  R +G   +G   +A  + +++K EG   P+  +YN L+  LCK  + D  
Sbjct: 448 LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP-PDLITYNVLINGLCKLGNFDDA 506

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              +++M+  G   D  T T ++  +  SG   KA  VF++++  G     V +++L+ +
Sbjct: 507 NELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHS 566

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           ++  G +D A +  + M D  +  N  T+  LI+G  K++ +D A  LF +M   G + +
Sbjct: 567 YAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPN 626

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
              Y ++I      +  + AL+LY +M    I PD    S L+   S + +L  +++
Sbjct: 627 KYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLR 683


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 232/484 (47%), Gaps = 24/484 (4%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL LFD+M   G  +DA MYDV+I    +      A++L+ EM G+G+ PD  + +  I+
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 249 SCSD--EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGEP 304
                 + +  L V     +       L  +S++ +LV    +D+A  L   M+   G+ 
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKK 288

Query: 305 IADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           +  V   MLM                  +    V+P   ++ ++I     +G  D    L
Sbjct: 289 MDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKL 348

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            R+M + G + + + +N +I GL    R +++  LL+ + ++G  P  FT   +   LC+
Sbjct: 349 CRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCK 407

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            Q +  A+NL  KM+  G +P +     L+   C+ G+  EA +  ++M  +GF P+ V 
Sbjct: 408 HQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  + G I  K  D A  L  ++  +G       YNI+I+GL    RV E +++    +
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL 527

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           ++G +P+  TYN +ING+ K+G +  A   + R + K+  +P+++TYT+ IDG C     
Sbjct: 528 SEGFVPTTMTYNSIINGFVKAGMMGSA-FGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D A+ L   +   G  P+   + A I   CK      AL    ++ + G+ PD+ V+ + 
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 647 ISAF 650
           ++ +
Sbjct: 647 VTGY 650



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 250/556 (44%), Gaps = 24/556 (4%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE--MQDYGWGYDKYTLTPLLQVYCNSG 115
           RE    P   +Y+ +++ L K   +D   +RLK+  +   G   D    T L+  YC +G
Sbjct: 247 REAGFEPWELTYSSVVDVLVKVRRMDEA-LRLKDQMLLATGKKMDVVLATMLMHGYCLNG 305

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +  KAL +F+E++  G    +V + +L+      G  D+  +L  +M +  +  +   F 
Sbjct: 306 EVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFN 365

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I G ++  R   A+ L   +  +G   D   Y  +I  LCK+++L  A+ L+ +MK +
Sbjct: 366 LVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEA 424

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G+ P       L+    ++G +   +K   E  D+      +   ++M+  +   + D A
Sbjct: 425 GVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNA 484

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           Y LL  M                 +  VS    +++I+IN L    ++     + +    
Sbjct: 485 YALLNEM----------------RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G +     YN++I+G   +  +  ++ + R+M + G  P   T  S     CR      
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ L+  +R  G +P +      I   CK G    A  FL  ++++G  PD+  Y++ + 
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G  ++K +  A + +  +       D   Y  +I G  K   VA A +L++EM+   +IP
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
              T+  L +G C+SG+ID A   L  M  +   SP+++TY  LI+     G+  +A  L
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDM-RRLDVSPNIVTYNMLINACVRDGKLQEAFQL 767

Query: 593 WNEMEEKGCAPNRITF 608
            +EM   G  P+  T+
Sbjct: 768 HDEMLSSGVVPDDTTY 783



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 6/355 (1%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +G V    S  D+++ T L     D AL+LF EM   GC  +  +Y+ +I       
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAAD-ALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
              ++  L  EM  +G KP           LC+ +D   AL ++ KMR  G EPW    +
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 434 LLIKELCKHGKAMEAFRFLTDMV-QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            ++  L K  +  EA R    M+   G   D+V  +  + G      V  AL+LF ++ +
Sbjct: 260 SVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVS 319

Query: 493 HGCCPDVVAYNIIISGLCKAQRVA-EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G  P  V Y ++I G C A+ +  E   L  +MI +GL+PS   +NL+I G  +     
Sbjct: 320 DGVTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A+  L   L  ++G PDV TY  LI  LC   +  +A+ LW++M+E G  P+ +T+ +L
Sbjct: 379 DAIGLLK--LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + G C+  R   AL  +  M +KG  P+   +  L+  ++ +     A+ +L EM
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 33/396 (8%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L     + EA  L+D++K  G+  P+  +Y+ LL   C+   +D       EM 
Sbjct: 399 GCLIHWLCKHQKLHEAVNLWDKMKEAGV-KPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
           D G+  ++ T T L++ Y     FD A ++ NE+  +G    ++ ++IL+        V 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +  E+++R           T+  +I+GFVK   +  A  ++ +M K G   +   Y   I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-------LTLLVKEIWE 265
            G C+    ++A++L   ++  GI PD    +  I +   +G        L LL+K+   
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD--- 634

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---------- 315
              +     + NS +    +   + +A     +MIK   +AD  +   +I          
Sbjct: 635 --GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVA 692

Query: 316 ---------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        V P+  +F  + + L + G +D A  L  +M ++    N+  YN LI
Sbjct: 693 FALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLI 752

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           +      +L+E+++L  EM  SG  P   T + + R
Sbjct: 753 NACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 1/130 (0%)

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           ++ M+T+G++P   +   L+       +   A+     M  K   + D   Y  +I    
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYA-DAKMYDVVIRACV 196

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G   DA+ L++EM   G  P+   +   I+GLCK      AL     M+E G +P   
Sbjct: 197 RGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWEL 256

Query: 642 VFVALISAFL 651
            + +++   +
Sbjct: 257 TYSSVVDVLV 266


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 196/423 (46%), Gaps = 82/423 (19%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN ++F I+I+ L K G +  AL LF EMTQ G + + F Y  +I GLC S R++++Y L
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH---------------- 425
             +M++SG  P   T N++    C    V  A +L+R     G+                
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313

Query: 426 -------------------EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                              +P V   T+++K L + GK  +A   L +M + G +PD VC
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I G  D+  +  A  L  +I  H C P+V  Y+I+ISG+C+     +A+++FNEM 
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAML----------------------------CLS 558
             G  PS  T+N LI+G CK+G +++A L                             L 
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493

Query: 559 RMLEK------------------ESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +M+E+                  +SG +P + TY  L++G C  G  + A  L+ EM+ K
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G +P+ +T+  LI GL +  R   A   F  M++ G  PD  V+  +++     +  P A
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613

Query: 660 FEV 662
           F +
Sbjct: 614 FSL 616



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 252/580 (43%), Gaps = 73/580 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L++VY   G  DKA+  F  + D     D + ++++L    +   +  A  +  RM   N
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN 191

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  TF +LI G  K   V  AL LFD+MT+ G   DA  Y V+I GLC++K+++ A 
Sbjct: 192 CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAY 251

Query: 226 QLYSEMKGSGITPDFEILSKLIT------------------------------SCSDEG- 254
           +L+ +MK SG+ PDF   + L+                               SC   G 
Sbjct: 252 RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGL 311

Query: 255 -------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                  ++ LL +++ ED +V     L   +M+ L   G +  A  LL  M        
Sbjct: 312 FRAKRYEDVQLLYRKMIED-NVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT------- 363

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +  V P+T  ++++I      G L  A SL  E+++  C  NV  Y+ LI 
Sbjct: 364 ---------ESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV----- 422
           G+C +    ++ E+  EME+ G  P+  T NS+   LC+   +  A  L  KM +     
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPS 474

Query: 423 ------QGHEPWVKHNTL--LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                 QG    +   +L  ++++LC  G   +A+R L  +   G  P I  Y+  + G 
Sbjct: 475 LFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGF 534

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             +   + A +LFR++   G  PD V Y  +I+GL + QR  +A  +F++M   G  P  
Sbjct: 535 CKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDA 594

Query: 535 ATYNLLINGWCKSGNIDQAM-LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           A Y  ++   C+   + +A  L L  +    S   + I     I+G       + A+   
Sbjct: 595 AVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAI---KAIEGYFEKQEVEKAVRGL 651

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            EM+ K    +   +   + GLC+  R   AL  F +++E
Sbjct: 652 LEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEE 691


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 239/514 (46%), Gaps = 15/514 (2%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L   F + G +++A E   RM +       ++   L+H   K        + F+ M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A     Y+V+I  LCK   LE + +L+ +M+  G++PD    + LI      G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             +     E +DV         +  I+  NG       L+    K E +         + 
Sbjct: 282 EEVASLFNEMKDVGC-------VPDIITYNG-------LINCYCKFEKMPRAFEYFSEMK 327

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              + PN  ++  +I+   K+G +  A+ L  +M + G + N F Y +LID  C +  L 
Sbjct: 328 NNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLT 387

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+++LL +M ++G K    T  ++   LC+   ++ A  + R M   G  P  +  T L+
Sbjct: 388 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 447

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               K  +  +A + L  M +    PD++ Y + I G    ++++    +  ++ + G  
Sbjct: 448 HGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGIS 507

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            + V    II    KA + ++A + F EM   G+  ++ TY +LI+G C++G ++ A+  
Sbjct: 508 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDY 567

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             RML      P+V  YT+LIDGLC     + A  L++EM+ +G  P+   F ALI G  
Sbjct: 568 FCRMLSL-GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNL 626

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           K    + ALV    M E  ++ D+ V+ +L+S F
Sbjct: 627 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 258/577 (44%), Gaps = 17/577 (2%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
            ++ C    G    L      +GL+EEAN  F ++ R    +P   S N LL  L KS +
Sbjct: 152 TRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM-RNFRTLPKARSCNFLLHRLSKSGN 210

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
             LV     +M   G     +T   ++   C  G  + +  +F ++ + G   + V ++ 
Sbjct: 211 GQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNS 270

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K G +++   L   M D     +  T+  LI+ + K  ++ +A + F +M  +G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              +   Y  +I   CK   ++ A++L  +M+ +G+ P+    + LI +    G LT   
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLT--- 387

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            E W+         L N +++  V    +     LL  + K   + +       + K  +
Sbjct: 388 -EAWK---------LLNDMLQAGVKLNIVTYT-ALLDGLCKAGRMIEAEEVFRSMLKDGI 436

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SPN   +  +++  +K  +++ A+ + ++MT+     ++ LY ++I G C+  +LEE+  
Sbjct: 437 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L EM+  G         ++     +      ALN  ++M+  G E  +    +LI  LC
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G    A  +   M+  G  P++  Y++ I GL     ++ A +LF ++   G  PD+ 
Sbjct: 557 EAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDIT 616

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           A+  +I G  K   + EA  L + M    +   +  Y  L++G+ + G + QA    + M
Sbjct: 617 AFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 676

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           +EK    P+ +    L+      G+ D+AI L NEME
Sbjct: 677 IEK-GILPEEVLCICLLREYYKRGQLDEAIELKNEME 712



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/611 (24%), Positives = 255/611 (41%), Gaps = 91/611 (14%)

Query: 119 KALSVFNEIIDHGWVDEHVFSI-----LLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           K + +F+  +   WV + +  +     L + F KW                  R   +++
Sbjct: 59  KIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAG-----------SQVGFRHTTESY 107

Query: 174 CVLIH----------------GFVKKSRVDKAL---QLFDKM--TKSGFASDAAMYDVII 212
           C+++H                  +  SR+D       +FD +  T++   S + ++DV+ 
Sbjct: 108 CIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLF 167

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDV 269
               +   LE A + +S M+     P     + L+   S  G    LV++ + D     +
Sbjct: 168 SVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGN-GQLVRKFFNDMIGAGI 226

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                  N ++  L   G ++ +  L   M       ++G+          SP+  +++ 
Sbjct: 227 APSVFTYNVMIDYLCKEGDLENSRRLFVQM------REMGL----------SPDVVTYNS 270

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+   K G L+   SLF EM  +GC+ ++  YN LI+  C   ++  ++E   EM+ +G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            KP   T +++    C+   + GA+ L+  MR  G  P     T LI   CK G   EA+
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L DM+Q G   +IV Y+A + GL    R+  A E+FR +   G  P+   Y  ++ G 
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE-SGSP 568
            KA+R+ +A  +  +M    + P +  Y  +I G C    +++  L L  M  +  S +P
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510

Query: 569 ---------------------------------DVITYTTLIDGLCIAGRPDDAIMLWNE 595
                                             ++TY  LIDGLC AG  + A+  +  
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M   G  PN   + +LI GLC  +   +A   F  M+ +GM PD+  F ALI   L   N
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630

Query: 656 PPLAFEVLKEM 666
              A  ++  M
Sbjct: 631 LQEALVLISRM 641



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 231/524 (44%), Gaps = 20/524 (3%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS++     +R    D++ +    S      +I  L   G +E +  LF Q++  GL  P
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLS-P 263

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN L++   K  S++ V     EM+D G   D  T   L+  YC   +  +A   F
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+ ++G     V +S L+ AF K G +  A +L+  M    +  NE T+  LI    K 
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +A +L + M ++G   +   Y  ++ GLCK  ++  A +++  M   GI+P+ ++ 
Sbjct: 384 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 443

Query: 244 SKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + L+     ++  E  + + +   + ++    +L  SI+    S   +++   +L+ M  
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          +G +S N      II+   K GK   AL+ F+EM  +G    +  
Sbjct: 504 ---------------RG-ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 547

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y  LIDGLC +  +E + +    M   G +P      S+   LC    +  A  L  +M+
Sbjct: 548 YCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ 607

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G  P +   T LI    KHG   EA   ++ M +     D+  Y++ + G      + 
Sbjct: 608 CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 667

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            A + F ++   G  P+ V    ++    K  ++ EA +L NEM
Sbjct: 668 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 175/413 (42%), Gaps = 60/413 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI C      +  A   F ++K  GL  PN  +Y+ L++A CK   +      L +M+  
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGL-KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   +++T T L+   C +G   +A  + N+++  G  ++   ++ LL    K G + +A
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 424

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+   M    I  N++ +  L+HG++K  R++ A+++  +MT+     D  +Y  II G
Sbjct: 425 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 484

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C  ++LE    +  EMK  GI+ +  I + +I +    G+ +  +    E +DV     
Sbjct: 485 HCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 544

Query: 275 LCNSIMRI--LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI----------------- 315
           +    + I  L   G ++ A +    M+      +V V   +I                 
Sbjct: 545 IVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFD 604

Query: 316 ---FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG---- 368
               +G ++P+ ++F  +I+  LK G L  AL L   MT++    ++ +Y +L+ G    
Sbjct: 605 EMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 369 -----------------------LC--------NSNRLEESYELLREMEESGF 390
                                  LC           +L+E+ EL  EME   +
Sbjct: 664 GELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAY 716



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  L++ LC++  V+L       M   G   +    T L+   C +   + A  +F+E+
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606

Query: 128 IDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G   D   F+ L+    K G + +A  LI RM +  I  +   +  L+ GF +   +
Sbjct: 607 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 666

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            +A + F++M + G   +  +   ++    K  QL+ A++L +EM+    + +F+
Sbjct: 667 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFD 721


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 278/621 (44%), Gaps = 50/621 (8%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L  LI+   S  ++ +A  +F Q K+ G+ + N  S N LL+ L +   ++ V   
Sbjct: 114 SATVLSLLIKVFASNKMLADAKDVFMQAKKIGVEL-NISSCNFLLKCLAEGDKLEAVRSL 172

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
             ++++ G   + YT T ++  YC                     + H  +I        
Sbjct: 173 FDDLKNSGPSPNVYTYTIMINFYCK--------------------ERHGQNI-------- 204

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            ++++A  ++E M++        T+ V IHG  +   ++ A      +  S    +   Y
Sbjct: 205 -DMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCY 263

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + +I G C+  + + AL+L  EMK  GI+PD    S L+ +   EG++   +  I E   
Sbjct: 264 NALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEH 323

Query: 269 VNTMTLL--CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            N    L  C S++  L + G ++   N    +      +  G +  +I          S
Sbjct: 324 CNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHEL------SAKGYKHDLI----------S 367

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+  LK   +  A +L  EM + G + +  +Y +LI   C    L+E+ +    M 
Sbjct: 368 YSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTML 427

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           + G +P   T N +    C R     AL  + +M+ Q   P     +++I  LCK+    
Sbjct: 428 QDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVE 487

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLI-DIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +A+  L  M ++   P ++ Y+  + G     K    A +L+R +   GC PD V   ++
Sbjct: 488 KAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVL 547

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           +    K  ++++A +LF EM  +GL      +  +I+G+C+ GN+ +A     +M ++ +
Sbjct: 548 VDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKM-KRNN 606

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            +P+V TYT L+DG C   R D A ML ++M+     P+  T+ ALI G  + +    A 
Sbjct: 607 VTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAY 666

Query: 626 VHFRMMKEKGMKPDMFVFVAL 646
             F  MK+KG  PD   ++ L
Sbjct: 667 EVFDEMKKKGTLPDHIAYLTL 687



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 222/521 (42%), Gaps = 23/521 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V S+L+  F+    +  A ++  +     + LN  +   L+    +  +++    LFD +
Sbjct: 117 VLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDL 176

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQ-----LEMALQLYSEMKGSGITPDFEILSKLITSCS 251
             SG + +   Y ++I   CK +      +E A  +  EM+  G  P        I    
Sbjct: 177 KNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLC 236

Query: 252 DEGELTLLVKEIWEDRDVNT-MTLLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
             G +     +I + R  N  + + C N++++     G  D+A  LL+ M       D G
Sbjct: 237 RVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEM------KDEG 290

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           +          SP+  S+ I++N    +G ++  ++L +EM        +    +++ GL
Sbjct: 291 I----------SPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGL 340

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
                + +      E+   G+K    + +++     +  +V  A NLV +MR  G  P  
Sbjct: 341 RTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDY 400

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                LI+E C+ G   EA +    M+Q+G  PDI+  +  +       + + AL     
Sbjct: 401 IIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQ 460

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +      P+   Y++II+ LCK Q V +A ++   M    + PSV  Y  +++G+ K   
Sbjct: 461 MKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFK 520

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
                  L R + K    PD +T T L+D     G+   A+ L+ EM E+G + +   F 
Sbjct: 521 NPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFT 580

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+I G C+    + A   ++ MK   + P++  +  L+  F
Sbjct: 581 AIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGF 621



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 222/507 (43%), Gaps = 64/507 (12%)

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A +  ++I     NK L  A  ++ + K  G+  +    + L+  C  EG+    V+ ++
Sbjct: 115 ATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLL-KCLAEGDKLEAVRSLF 173

Query: 265 ED-------RDVNTMTLLCNSIMRILV-SNGSIDQAYNLLQAMI-KGEPIADVGVEMLMI 315
           +D        +V T T++ N   +     N  ++QA  +L+ M  KGE            
Sbjct: 174 DDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGE------------ 221

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                +P   ++ + I+ L + G ++ A +  +++       N++ YN LI G C   R 
Sbjct: 222 -----NPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRP 276

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +E+ +LL EM++ G  P  ++ + +    C   D+   +NL+++M     +P +   T +
Sbjct: 277 DEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSV 336

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA------------ 483
           +  L   G   +   F  ++  +G+  D++ YS  I G +    V  A            
Sbjct: 337 LMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396

Query: 484 -------LELFRDICAHGCC----------------PDVVAYNIIISGLCKAQRVAEAED 520
                  + L R+ C  GC                 PD++  N I+   C   +  EA  
Sbjct: 397 VPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALI 456

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
             N+M  + ++P+  TY+++IN  CK   +++A   L  M  K++  P VI YTT++DG 
Sbjct: 457 YINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMF-KDNIFPSVIHYTTIMDGY 515

Query: 581 CIAGR-PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
               + P  A  L+ +M + GC P+ +T   L+    K  +   AL  F+ M E+G+  D
Sbjct: 516 AKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRD 575

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
            F F A+I  +    N   A+ + K+M
Sbjct: 576 EFAFTAIIDGYCRVGNVKRAWSMYKKM 602



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 6/338 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V  + +   ++I     +  L  A  +F +  +IG   N+   N L+  L   ++LE   
Sbjct: 111 VGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVR 170

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQ-----DVVGALNLVRKMRVQGHEPWVKHNTL 434
            L  +++ SG  P  +T   M    C+ +     D+  A  ++ +M  +G  P V    +
Sbjct: 171 SLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGV 230

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            I  LC+ G   +A+  + D+       +I CY+A I G     R D AL+L  ++   G
Sbjct: 231 YIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEG 290

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD+ +Y+I+++  C    +    +L  EM      P +     ++ G    G ++   
Sbjct: 291 ISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDC- 349

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           L     L  +    D+I+Y+TLI G         A  L +EM + G  P+ I +++LI  
Sbjct: 350 LNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIRE 409

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            C+    + AL +F  M + G++PD+     ++  + S
Sbjct: 410 YCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCS 447


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 6/347 (1%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           ++P  S ++  ++ L K GK+  A+ + + M    C  +V  +N LI GLC + RL+E+ 
Sbjct: 50  MAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQ 109

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           ++L EME SGF     T N++   L        A+ +++ M      P  +    +I   
Sbjct: 110 QVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGF 166

Query: 440 CKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVDLALELFRD-ICAHGCCP 497
           CK G+   A+ FL +M Q  G  PD   YS  I GL     +  A EL ++ I    CC 
Sbjct: 167 CKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCA 226

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VVA+N ++ G CKAQ +  A +L + M+  G  P V TY+ +I+G C+ G++D+    L
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M+ +    PDV+TYT L+ GLC AG+  +A  L   M E GC PN +T+  +  GLCK
Sbjct: 287 EKMVSR-GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            D+   A      +++KG   D+  F  L+ +    L    AF+  K
Sbjct: 346 IDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAFQKWK 392



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 194/411 (47%), Gaps = 54/411 (13%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACE 156
           +D YT   L++ +C +G+   A+ +  E+     +     +++  + A  K G+V +A E
Sbjct: 16  FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           +++ M D   + +  TF  LI G  K  R+D+A Q+ D+M +SGFA++   Y+ +I GL 
Sbjct: 76  VVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL- 134

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
                                          +S    GE  L+++ +    D  T     
Sbjct: 135 -------------------------------SSAGRSGEAVLVMQGMTTTPDTQTY---- 159

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+I+     +G ID+AY  L+ M +               +   SP+T ++ I+IN L K
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQ---------------RAGCSPDTFTYSILINGLCK 204

Query: 337 DGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
              L  A  L +EM  +  C  +V  +N L+DG C +  L+ + ELL  M E G  P   
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T +++   LCR  DV     L+ KM  +G +P V   T+L+  LCK GK +EA R +  M
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +++G  P+ V YS    GL  I ++D+A +L   I   G   DVVA+  ++
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 5/293 (1%)

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           + Y  L+   C +  L+ + +LLREME+  G  PT    N     LC+   V  A+ +V+
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            M+    +P V     LI  LCK G+  EA + L +M + GF  ++V Y+  I GL    
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATY 537
           R   A+ + + +      PD   YN II G CK+  +  A     EM  + G  P   TY
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++LING CKS N+ +A   L  M+ ++     V+ + TL+DG C A   D A  L + M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           E GCAP+ +T+  +I GLC+C            M  +G KPD+  +  L++  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 180/410 (43%), Gaps = 58/410 (14%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           T+ VL+        +  A+ L  +M +  G A   +MY+  +  LCK+ ++  A+++   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           MK     PD    + LI                           LC +        G +D
Sbjct: 80  MKDGACKPDVVTFNTLIAG-------------------------LCKA--------GRLD 106

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +L  M                 +   + N  +++ +IN L   G+   A+ + + M
Sbjct: 107 EAQQVLDEM----------------ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE-SGFKPTHFTLNSMFRCLCRRQD 409
           T     Q    YN +I G C S  ++ +Y  L EM++ +G  P  FT + +   LC+  +
Sbjct: 151 TTTPDTQT---YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207

Query: 410 VVGALNLVRKM--RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +  A  L+++M  R       V  NTL +   CK      A   L+ M++ G  PD+V Y
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTL-VDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S  I GL     VD    L   + + GC PDVV Y ++++GLCKA ++ EA  L   M+ 
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
            G  P+  TY+L+ +G CK   +D A   L+ + +K   + DV+ + TL+
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVT-DVVAFETLL 375



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 176/408 (43%), Gaps = 58/408 (14%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +NY+Y  L+ A                                   +C +G+   A+ + 
Sbjct: 17  DNYTYFVLVRA-----------------------------------HCLAGELQAAMDLL 41

Query: 125 NEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            E+     +     +++  + A  K G+V +A E+++ M D   + +  TF  LI G  K
Sbjct: 42  REMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCK 101

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+D+A Q+ D+M +SGFA++   Y+ +I GL    +   A+ +   M+G   TPD + 
Sbjct: 102 AGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTTPDTQT 158

Query: 243 LSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + +I      GE+      ++E+ +    +  T   + ++  L  + ++ +A  LLQ M
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I                +     +  +F+ +++   K   LD A  L   M + GC  +V
Sbjct: 219 IG---------------RKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y+ +IDGLC    +++ + LL +M   G KP   T   +   LC+   +V A  LV++
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           M   G  P     +L+   LCK  K   A   LT +  +G + D+V +
Sbjct: 324 MLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 173/404 (42%), Gaps = 54/404 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R     G ++ A  L  +++++    P    YN  + ALCKS  V      +K M+D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               D  T   L+   C +G+ D+A  V +E+   G+    V ++ L+   S  G   +A
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIG 213
             +++ M       + +T+  +IHGF K   +D+A    ++M  ++G + D   Y ++I 
Sbjct: 144 VLVMQGM---TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK+  L  A +L  EM G                                 +D     
Sbjct: 201 GLCKSSNLRKADELLQEMIGR--------------------------------KDCCASV 228

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N+++        +D+A  LL +M+                +   +P+  ++  II+ 
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSML----------------EHGCAPDVVTYSTIIDG 272

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L + G +D   +L  +M   GC  +V  Y  L+ GLC + ++ E+  L++ M E G  P 
Sbjct: 273 LCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPN 332

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLI 436
             T + +F  LC+   +  A +L+  +R +G     V   TLL+
Sbjct: 333 AVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLL 376



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEK-GCAPNRITFMALITGLCKCDRPRAALVH 627
           D  TY  L+   C+AG    A+ L  EME++ G AP    +   +  LCK  +   A+  
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + MK+   KPD+  F  LI+          A +VL EM
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM 115


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 181/332 (54%), Gaps = 1/332 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  ++  A+SL  +M +IG   ++  YN +ID LC + R+ ++ + 
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF 212

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            +E+   G +P   T  ++   LC       A  L+R M  +   P V   + L+    K
Sbjct: 213 FKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVK 272

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +GK +EA     +MV+    PDIV YS+ I GL    R+D A ++F  + + GC PDVV+
Sbjct: 273 NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CKA+RV +   LF +M  +GL+ +  TYN LI G+ + G++D+A    S+M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM- 391

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD+ TY  L+ GLC  G  + A++++ +M++     + +T+  +I G+CK  + 
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             A   F  +  KG+KPD+  +  ++S   ++
Sbjct: 452 EDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTK 483



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 179/334 (53%), Gaps = 1/334 (0%)

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           T L+D KL  A++LFREM +     ++  +N L+  +    + +    L ++ME  G + 
Sbjct: 59  TRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRN 118

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +T N +  C C    V  AL+++ KM   G+EP       L+   C+  +  +A   +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             MV+ G+ PDIV Y+A I  L   +RV+ AL+ F++I   G  P+VV Y  +++GLC +
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R  +A  L  +MI + + P+V TY+ L++ + K+G + +A      M+ + S  PD++T
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV-RMSIDPDIVT 297

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y++LI+GLC+  R D+A  +++ M  KGC P+ +++  LI G CK  R    +  FR M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++G+  +   +  LI  F    +   A E   +M
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 184/362 (50%), Gaps = 17/362 (4%)

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +  A NL + M+K  P                 P+   F+ +++ ++K  K D+ +SL +
Sbjct: 66  LHDAINLFREMVKTRPF----------------PSIVDFNRLLSAIVKMKKYDVVISLGK 109

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M  +G   +++ +N +I+  C   ++  +  +L +M + G++P   T+ S+    CRR 
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRN 169

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V  A++LV KM   G+ P +     +I  LCK  +  +A  F  ++ ++G  P++V Y+
Sbjct: 170 RVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYT 229

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A + GL +  R + A  L RD+      P+V+ Y+ ++    K  +V EA+++F EM+  
Sbjct: 230 ALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
            + P + TY+ LING C    ID+A      M+ K    PDV++Y TLI+G C A R +D
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCFPDVVSYNTLINGFCKAKRVED 348

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            + L+ +M ++G   N +T+  LI G  +      A   F  M   G+ PD++ +  L+ 
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408

Query: 649 AF 650
             
Sbjct: 409 GL 410



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 174/324 (53%), Gaps = 1/324 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+I+IN      ++ LALS+  +M ++G   +     +L++G C  NR+ ++  L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E G++P     N++   LC+ + V  AL+  +++  +G  P V   T L+  LC  G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            +A R L DM++    P+++ YSA +   +   +V  A E+F ++      PD+V Y+ +
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+GLC   R+ EA  +F+ M++KG  P V +YN LING+CK+  ++  M  L R + +  
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK-LFRKMSQRG 360

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              + +TY TLI G    G  D A   +++M+  G +P+  T+  L+ GLC       AL
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420

Query: 626 VHFRMMKEKGMKPDMFVFVALISA 649
           V F  M++  M  D+  +  +I  
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQG 444



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 224/510 (43%), Gaps = 87/510 (17%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  + L +  N+  + VK      P+   +N LL A+ K    D+V    K+M+  G   
Sbjct: 61  LRDIKLHDAINLFREMVKTRPF--PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRN 118

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D YT   ++  +C   Q   ALSV  +++  G+  + V                      
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRV---------------------- 156

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                       T   L++GF +++RV  A+ L DKM + G+  D   Y+ II  LCK +
Sbjct: 157 ------------TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTR 204

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++  AL  + E+   GI P+    + L+                           LCNS 
Sbjct: 205 RVNDALDFFKEIGRKGIRPNVVTYTALVNG-------------------------LCNS- 238

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                  G  + A  LL+ MIK +                ++PN  ++  +++  +K+GK
Sbjct: 239 -------GRWNDAARLLRDMIKRK----------------ITPNVITYSALLDAFVKNGK 275

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A  +F EM ++    ++  Y++LI+GLC  +R++E+ ++   M   G  P   + N+
Sbjct: 276 VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNT 335

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +    C+ + V   + L RKM  +G     V +NT LI+   + G   +A  F + M   
Sbjct: 336 LINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNT-LIQGFFQVGDVDKAQEFFSQMDSF 394

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PDI  Y+  +GGL D   ++ AL +F D+       D+V Y  +I G+CK  +V +A
Sbjct: 395 GVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA 454

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSG 548
             LF  +  KGL P + TY  +++G C  G
Sbjct: 455 WGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 190/440 (43%), Gaps = 31/440 (7%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  L+   VK  + D  + L  KM   G  +D   ++++I   C   Q+ +AL +  +M 
Sbjct: 88  FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147

Query: 233 GSGITPDFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
             G  PD   +  L+         SD   L   + EI    D+    +  N+I+  L   
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI----VAYNAIIDSLCKT 203

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
             ++ A +  +                 I +  + PN  ++  ++N L   G+ + A  L
Sbjct: 204 RRVNDALDFFKE----------------IGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            R+M +     NV  Y+ L+D    + ++ E+ E+  EM      P   T +S+   LC 
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  +   M  +G  P V     LI   CK  +  +  +    M Q G + + V 
Sbjct: 308 HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I G   +  VD A E F  + + G  PD+  YNI++ GLC    + +A  +F +M 
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQA--MLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
              +   + TY  +I G CK+G ++ A  + C    L  +   PD++TYTT++ GLC  G
Sbjct: 428 KSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC---SLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 585 RPDDAIMLWNEMEEKGCAPN 604
              +   L+ +M+++G   N
Sbjct: 485 LQHEVEALYTKMKQEGLMKN 504



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            +G L+        V +A  L D++   G   P+  +YN ++++LCK+  V+      KE
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-RPDIVAYNAIIDSLCKTRRVNDALDFFKE 215

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           +   G   +  T T L+   CNSG+++ A  +  ++I        + +S LL AF K G+
Sbjct: 216 IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A E+ E M   +I  +  T+  LI+G     R+D+A Q+FD M   G   D   Y+ 
Sbjct: 276 VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNT 335

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I G CK K++E  ++L+ +M   G+                                 N
Sbjct: 336 LINGFCKAKRVEDGMKLFRKMSQRGLVN-------------------------------N 364

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T+T   N++++     G +D+A      M         G          VSP+  +++I+
Sbjct: 365 TVTY--NTLIQGFFQVGDVDKAQEFFSQM------DSFG----------VSPDIWTYNIL 406

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +  L  +G L+ AL +F +M +     ++  Y  +I G+C + ++E+++ L   +   G 
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGL 466

Query: 391 KPTHFTLNSMFRCLCRR--QDVVGALNLVRKMRVQG 424
           KP   T  +M   LC +  Q  V A  L  KM+ +G
Sbjct: 467 KPDIVTYTTMMSGLCTKGLQHEVEA--LYTKMKQEG 500


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 281/618 (45%), Gaps = 85/618 (13%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A  F  LI    S G   EA   F +++ E  C P  + YN +L  L  S  V  +
Sbjct: 133 LQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPL 192

Query: 86  EMRL-KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV 143
            + L   M   G   ++ T   L+   C  G    AL +F+E++  G   +    +ILL 
Sbjct: 193 ALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLS 252

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FA 202
           +    G++ +A  L+  M+D     +E T+   + G  K  RVD+A++  + + ++G F 
Sbjct: 253 SMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFV 312

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSE-MKGSGITPDFEILSKLITSCSDEGELT---L 258
                Y  +I GL    + E   Q Y E ++ +  +PD  + + +I  C++ G +     
Sbjct: 313 LGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFA 372

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
              E+ E R     T   N++++ L  +G +D A +L+  M +   + D           
Sbjct: 373 FFDEMKEKR-FTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLD----------- 420

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
                T++  I+I+ L K   +D A+ +F  M ++GC   V  YN LIDGL  ++RLEE+
Sbjct: 421 -----TNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEA 475

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             L  +ME  G  P+ F            +  +GA       +V+  E   K    L+  
Sbjct: 476 RMLFYKME-VGNNPSLFL-----------RLTLGA------NQVKDSESLQK----LVDS 513

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           +C+ G+ ++A++ L  ++  G +PD+V Y+  + GL  ++ +D AL LFR++   G   D
Sbjct: 514 MCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLD 573

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK------------ 546
            + Y  +I  L +A R  +A  LF +++  G  PS++ YN ++   C+            
Sbjct: 574 EITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWF 633

Query: 547 ------------------------SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
                                    G++D+A+  L + +++E GS +   YT  + GL  
Sbjct: 634 DHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIK-IDQEYGSVNSCPYTIWLIGLIQ 692

Query: 583 AGRPDDAIMLWNEMEEKG 600
           A R DDA+ +++ +EE G
Sbjct: 693 ARRIDDALKIFHILEESG 710



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 227/535 (42%), Gaps = 119/535 (22%)

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLL 259
           +DAAMYD I                 ++ + +G+ P       LI + +  G   E    
Sbjct: 117 ADAAMYDAI-----------------ADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDA 159

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
              +  +      T + N+++R+LV++G +              P+A + +   M+  G 
Sbjct: 160 FSRMEGEFGCRPTTFVYNAVLRVLVASGGV-------------VPLA-LALYNRMVAAGC 205

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + PN ++++++++ L K G    AL LF EM Q G   NV  +  L+  +CN+ +L+E+ 
Sbjct: 206 L-PNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAE 264

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--------------- 424
            LL  ME+ G  P   T N+    LC+   V  A+  +  +R  G               
Sbjct: 265 NLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDG 324

Query: 425 ----------------------HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
                                   P +   T++I+   + G+  +AF F  +M ++ F P
Sbjct: 325 LFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTP 384

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D  CY+  +  L D   +D A  L  ++  +    D   + I+I GLCK Q V EA  +F
Sbjct: 385 DTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVF 444

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM---------------------- 560
           + M+  G  P+V TYN+LI+G  ++  +++A +   +M                      
Sbjct: 445 DGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDS 504

Query: 561 --LEK------ESGS-----------------PDVITYTTLIDGLCIAGRPDDAIMLWNE 595
             L+K      +SG                  PDV+TY TL++GLC     D A+ L+ E
Sbjct: 505 ESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRE 564

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           ++ KG + + IT+  LI  L +  R   A+  F+ +   G  P + ++ +++ + 
Sbjct: 565 LQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSL 619



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 42/403 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +IR     G +++A   FD++K E    P+ + YN LL+ALC S  +D     + EM   
Sbjct: 357 MIRGCAEAGRIDDAFAFFDEMK-EKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQN 415

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               D  T T ++   C     D+A+ VF+ +++ G       +++L+    +   +++A
Sbjct: 416 NVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEA 475

Query: 155 CELIERMDDCN-----IRL--------NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
             L  +M+  N     +RL        + ++   L+    +  +V KA +L   +  SG 
Sbjct: 476 RMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGV 535

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTL 258
             D   Y+ ++ GLCK + L+ AL+L+ E++  G + D      LI S        +   
Sbjct: 536 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMT 595

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEPIADVGVEMLMIFK 317
           L ++I       ++++  NSIMR L     + QA N     ++K                
Sbjct: 596 LFQDILHIGGTPSLSIY-NSIMRSLCRMNKLSQAINFWFDHLLK---------------- 638

Query: 318 GTVSPNTSSFDIIINTLLK---DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                N S+ D +I +  K   +G LD A+    ++ Q     N   Y   + GL  + R
Sbjct: 639 ---KYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARR 695

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           ++++ ++   +EESG   T      + + LC  +++  A++++
Sbjct: 696 IDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVM 738


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 205/460 (44%), Gaps = 50/460 (10%)

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +YD++I   C+ K+ + A + +  MKG G+ P                            
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHA------------------------ 158

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                    CN ++ + + +   ++A+ L   M                F+  +  +  +
Sbjct: 159 ---------CNDMLSLFLKSNRTEKAWVLYAEM----------------FRMRIKSSVVT 193

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+I+IN L K+GKL  A      M  +G   NV  YN +I G C+  R+E +  +   M+
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G KP  +T  S    +C+   +  A  ++ KM+  G  P       LI   C  G   
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLE 313

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            AF +   MV+EG +P +  Y+  I  L    ++D A  + +++   G  PD V YNI+I
Sbjct: 314 MAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILI 373

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G C+   V +A  L +EMI+KG+ P+  TY  LI    K G + QA     +++ K   
Sbjct: 374 NGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK-GI 432

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD+I +  LIDG C  G  D A  +  EM++    P+ +TF  L+ G C+  +  AA  
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               MK +G+KPD   +  LIS +    +   AF V  EM
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 532



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 226/520 (43%), Gaps = 52/520 (10%)

Query: 98  GYDKYTLTPLL-QVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKAC 155
           G   Y L  LL +  C   + D A   F+ +   G +   H  + +L  F K    +KA 
Sbjct: 117 GIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAW 176

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L   M    I+ +  TF ++I+   K+ ++ KA +    M   G   +   Y+ II G 
Sbjct: 177 VLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGY 236

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           C   ++E A  ++  MK  G+ PD       I+    EG+L                   
Sbjct: 237 CSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKL------------------- 277

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
                         ++A  +L+ M       ++G+           P   +++ +I+   
Sbjct: 278 --------------EEASGMLEKM------KEIGLR----------PTAVTYNTLIDGYC 307

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G L++A     +M + G M  V  YN LI  L    +++E+  +++EM E G  P   
Sbjct: 308 NKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSV 367

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +    CR  +V  A  L  +M  +G +P     T LI  L K G+  +A      +
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V++G  PD++ ++A I G      +D A  + +++      PD V +N ++ G C+  +V
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A +L  EM ++G+ P   +YN LI+G+ K G++  A      ML     +P ++TY  
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI-GFNPTLLTYNA 546

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           LI GLC     D A  L  EM  KG  PN  T+++LI G+
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 195/415 (46%), Gaps = 21/415 (5%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N ++  LCK   +   +  +  M+  G   +  T   ++  YC+ G+ + A  +F+ +
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G   D + +   +    K G++++A  ++E+M +  +R    T+  LI G+  K  +
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEIL 243
           + A    DKM + G     + Y+++I  L  + +++ A  +  EM   G+ PD   + IL
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                 C +  +   L  E+   + +    +   S++ +L   G + QA +L + +++  
Sbjct: 373 INGYCRCGNVKKAFTLHDEMIS-KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVR-- 429

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        KG + P+   F+ +I+    +G +D A ++ +EM Q+  + +   +N
Sbjct: 430 -------------KG-IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+ G C   ++E + EL+ EM+  G KP H + N++     +R D+  A  +  +M   
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI 535

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           G  P +     LI+ LCK+ +   A + L +M+ +G  P+   Y + I G+ +++
Sbjct: 536 GFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 195/436 (44%), Gaps = 32/436 (7%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S+  ++ R     VL  ++ + R   S      +I  L   G +++A      ++  G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  PN  +YN ++   C    V+   M    M+  G   D YT    +   C  G+ ++A
Sbjct: 222 I-KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEA 280

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +  ++ + G     V ++ L+  +   G ++ A +  ++M    +     T+ +LIH 
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHA 340

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                ++D+A  +  +M++ G   D+  Y+++I G C+   ++ A  L+ EM   GI P 
Sbjct: 341 LFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400

Query: 240 FEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
               + LI   S  G +         ++ K I+ D       ++ N+++    +NG++D+
Sbjct: 401 RVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD------LIMFNALIDGHCANGNMDR 454

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A+ +L+ M + +                V P+  +F+ ++    ++GK++ A  L  EM 
Sbjct: 455 AFAMLKEMDQMK----------------VVPDEVTFNTLMQGRCREGKVEAARELIEEMK 498

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   +   YN LI G      +++++ +  EM   GF PT  T N++ + LC+ ++  
Sbjct: 499 SRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGD 558

Query: 412 GALNLVRKMRVQGHEP 427
            A  L+++M  +G  P
Sbjct: 559 HAEQLLKEMISKGITP 574



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 515 VAEAEDLFNEM-ITKGL--IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           V    ++FNE+ + +G+  I +   Y+LLI   C+    D A  C   M++ +   P V 
Sbjct: 99  VYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFD-MMKGKGVIPHVH 157

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
               ++     + R + A +L+ EM       + +TF  +I  LCK  + + A     +M
Sbjct: 158 ACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM 217

Query: 632 KEKGMKPDMFVFVALISAFLS 652
           +  G+KP++  +  +I  + S
Sbjct: 218 EALGIKPNVVTYNTIIHGYCS 238


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 143/586 (24%), Positives = 260/586 (44%), Gaps = 55/586 (9%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G    +YT + +L       QF  A  +F+E++   + +DE+V++  + A+ +   +D A
Sbjct: 155 GIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGA 214

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ RM+   ++ +   + VL++G  + +RV +A+++ + M + G  +D   Y  ++ G
Sbjct: 215 RGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYG 274

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C+ ++LEMAL++  +M      P     S ++      G +    +      ++  +  
Sbjct: 275 FCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPN 334

Query: 275 L--CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           L  CN+++  L  +    +A  L + M      A+ G+E          PN  ++ I+I+
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGM------ANRGLE----------PNEVTYAILIH 378

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           +L K G +D AL +F  M + G    V+ YN+LI+G C  +   ++  LL EM E G  P
Sbjct: 379 SLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAP 438

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
           +  + + +   LCR+ D+  A+ L R+M   G    V   T LI   CK G   EA R  
Sbjct: 439 SAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS----- 507
             M+    +P+ V ++  I G   +  V  A +L+  +   G  PD   Y  +IS     
Sbjct: 499 DKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLT 558

Query: 508 ------------------------------GLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
                                         G CK  R+ E   +++EM  +G+   + ++
Sbjct: 559 LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISF 618

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
            +++    K  + ++  +    M EK    PD + +T +ID          A+  W++M 
Sbjct: 619 TVIVYAALKLHDGEKISVLFREMKEK-GVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
             GC+PN +T+  LI  LCK     +A +    M      P+ F +
Sbjct: 678 ADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTY 723



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 231/552 (41%), Gaps = 55/552 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
            EA  LF  +   GL  PN  +Y  L+ +LCK   +D        M++ G     Y    
Sbjct: 352 REAERLFRGMANRGL-EPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNS 410

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  YC    F +A  + NE+++ G       +S L+    + G++  A EL   M    
Sbjct: 411 LINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNG 470

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N  TF  LI GF K   +D+A +LFDKM  S    +   ++V+I G C+   +  A 
Sbjct: 471 VSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAF 530

Query: 226 QLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           QLY +M   G+TPD      LI+  C   G +    KE  +D + N + L          
Sbjct: 531 QLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK--AKEFVDDLENNCVVL---------- 578

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
                                                 N+ S   ++    K+G+L    
Sbjct: 579 --------------------------------------NSFSLTTLMYGFCKEGRLTETY 600

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            ++ EM   G   ++  +  ++      +  E+   L REM+E G KP +     M    
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            + +++V ALN   KM   G  P V   T+LI  LCK G    A     +M+   FLP+ 
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  +  L +   ++ A  L   I   GC  + V +N +I G CKA ++  A DL   
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
               G  P   +Y+ +IN  CK G+I++A    + ML K    PD++ Y  LI    I G
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK-GLKPDIVAYNILIRWCNIHG 838

Query: 585 RPDDAIMLWNEM 596
             D  + ++++M
Sbjct: 839 EFDKGLGIYSDM 850



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 153/640 (23%), Positives = 272/640 (42%), Gaps = 56/640 (8%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + Y Y   + A C+  ++D     L  M+  G          L+   C + +  +A+ V 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N +++ G V DE  +  L+  F +  E++ A E+ + M   +   +  +   ++ G  K+
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +DKA +L   + + G   +    + +I  LCK+++   A +L+  M   G+ P+    
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 244 SKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + LI S    G +   L + +   ++ +       NS++     + +  QA  LL  M++
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG ++P+ +S+  +I  L + G L  A+ L REM + G   NV+ 
Sbjct: 434 ---------------KG-LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +  LI G C    ++E+  L  +M +S   P   T N M    CR  +V  A  L  +M 
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537

Query: 422 VQGHEPW--------------------------VKHN---------TLLIKELCKHGKAM 446
            +G  P                           +++N         T L+   CK G+  
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           E +    +M   G   D++ ++  +   + +   +    LFR++   G  PD V +  +I
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
               K + + +A + +++MI  G  P+V TY +LIN  CKSG +  A +    ML     
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF- 716

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P+  TY   +D L   G  + A +L   + E GC  N +TF  LI G CK  + + A+ 
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAID 775

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   E G  PD   +  +I+      +   AF++  EM
Sbjct: 776 LMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEM 815



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 225/527 (42%), Gaps = 54/527 (10%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I + + T   ++   +K  +   A  LFD+M +  F  D  +Y   I   C+ + L+ A 
Sbjct: 156 IAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGAR 215

Query: 226 QLYSEMKGSGITPDFEILSKLITS-CSDEGELTLL-VKEIWEDRDVNTMTLLCNSIMRIL 283
            L + M+  G+       + L+   C +   L  + VK    +R +    +   +++   
Sbjct: 216 GLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGF 275

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                ++ A  +   M+    +                P+ +S   +++ L K G +D A
Sbjct: 276 CRTEELEMALEMTDDMLSLHFV----------------PSVASCSFMVDGLRKRGHIDKA 319

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             L   + ++G + N+F  N LID LC   R  E+  L R M   G +P   T   +   
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+R  +  AL +  +MR +G    V     LI   C+H    +A   L +MV++G  P 
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS 439

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              YS  I GL     +  A+EL R++  +G   +V  +  +ISG CK   + EA  LF+
Sbjct: 440 AASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD 499

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY---------- 573
           +MI   ++P+  T+N++I G+C+ GN+ +A     +M+++   +PD  TY          
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR-GLTPDNYTYRSLISVLCLT 558

Query: 574 -------------------------TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
                                    TTL+ G C  GR  +   +W+EM  +G   + I+F
Sbjct: 559 LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISF 618

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
             ++    K        V FR MKEKG+KPD      +I     E N
Sbjct: 619 TVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 209/488 (42%), Gaps = 61/488 (12%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
             LI  L   G++++A  +FD+++ +G+ V   Y YN L+   C+  +       L EM 
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRV-TVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
           + G      + +PL+   C  G    A+ +  E+  +G   + + F+ L+  F K G +D
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L ++M D ++  NE TF V+I G+ +   V KA QL+D+M   G   D   Y  +I
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 213 G-----------------------------------GLCKNKQLEMALQLYSEMKGSGIT 237
                                               G CK  +L     ++ EM+  G+ 
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 238 PD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
            D   F ++        D  ++++L +E+ E + V    +    ++ +     +I QA N
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKE-KGVKPDNVFHTCMIDVHSKEENIVQALN 671

Query: 295 LLQAMIKGEPIADVGVEMLMI-------------------FKGTVSPNTSSFDIIINTLL 335
               MI      +V    ++I                     G   PN+ +++  ++ L 
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
            +G+L+ A  L   + + GC+ N   +N LI G C + +++ + +L++   ESGF P   
Sbjct: 732 NEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + +++   LC+  D+  A  L  +M  +G +P +    +LI+    HG+  +     +DM
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850

Query: 456 VQEGFLPD 463
           V   +  D
Sbjct: 851 VNLKYADD 858



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 144/322 (44%), Gaps = 36/322 (11%)

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L  EM +  F    +   +  R  C  +++ GA  L+ +M  +G +       +L+  L
Sbjct: 181 DLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGL 240

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--------- 490
           C++ + +EA      MV+ G + D V Y   + G    + +++ALE+  D+         
Sbjct: 241 CRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSV 300

Query: 491 --CAH------------------------GCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             C+                         G  P++ A N +I  LCK +R  EAE LF  
Sbjct: 301 ASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  +GL P+  TY +LI+  CK G +D A+    RM EK      V  Y +LI+G C   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK-GIRVTVYPYNSLINGYCQHD 419

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
               A  L NEM EKG AP+  ++  LI GLC+     +A+   R M   G+  +++ F 
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFT 479

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LIS F  + N   A  +  +M
Sbjct: 480 TLISGFCKDGNMDEAARLFDKM 501


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 258/581 (44%), Gaps = 122/581 (20%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E   +P+   +  LL  + K    D+V    K +Q  G   D YT   L+  +C S Q  
Sbjct: 64  ESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPC 123

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A S   +++  G+ +  +F                                 TF  LI+
Sbjct: 124 LASSFLGKLMKLGF-EPDIF---------------------------------TFTSLIN 149

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF   +R+++A+ + ++M + G   D  +Y  II  LCKN  ++ AL L+++M+  GI P
Sbjct: 150 GFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  + + L+    + G         W D D+                         LL+ 
Sbjct: 210 DVVMYTSLVNGLCNSGR--------WRDADL-------------------------LLRG 236

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M+K +                + P+  +F+ +I+  +K+GKL  A  L+ EM Q+    N
Sbjct: 237 MMKRK----------------IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +F Y +LI+GLC   RL+E+ ++   ME  G  P                DVV       
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFP----------------DVVAY----- 319

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
                         T LI   CK  K  +A +   +M Q+G   + + Y+  I G   + 
Sbjct: 320 --------------TSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK---GLIPSVA 535
           + ++A E+F  + + G  P++  YN+++  LC   +V +A  +F +M  +   G+ P++ 
Sbjct: 366 KPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIR 425

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN+L++G C +G +++A++    M +K      +ITYT +I G+C AG+  DA+ L+  
Sbjct: 426 TYNVLLHGLCYNGKLEKALMVFGDM-QKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCS 484

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           +  KG  PN +T+  +I+GL +      A V FR MKE G+
Sbjct: 485 LPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 243/493 (49%), Gaps = 33/493 (6%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           + ++AL LF  M +S        +  ++  + K K+ ++ + L   ++  G++ D    +
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 245 KLIT-------SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
            L+         C     L  L+K  +E  D+ T T L N           I++A +++ 
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEP-DIFTFTSLING----FCLGNRIEEAMSMVN 165

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M          VEM       + P+   +  II++L K+G +D ALSLF +M   G   
Sbjct: 166 QM----------VEM------GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V +Y +L++GLCNS R  ++  LLR M +   KP   T N++     +   ++ A  L 
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELY 269

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M      P +   T LI  LC  G+  EA +    M  +G  PD+V Y++ I G    
Sbjct: 270 NEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 329

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           K+V+ A+++F ++   G   + + Y  +I G     +   A+++F  M+++G+ P++ TY
Sbjct: 330 KKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTY 389

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKE--SGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           N+L++  C +G +++A++    M ++E     P++ TY  L+ GLC  G+ + A+M++ +
Sbjct: 390 NVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGD 449

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE-- 653
           M+++      IT+  +I G+CK  + + AL  F  +  KG+KP++  +  +IS    E  
Sbjct: 450 MQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGL 509

Query: 654 -LNPPLAFEVLKE 665
            L   + F  +KE
Sbjct: 510 MLEAHVLFRKMKE 522



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           I+   L   + + AL LF  M +   + ++  +  L++ +    + +    L + ++  G
Sbjct: 42  ILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG 101

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                +T N +  C C+      A + + K+   G EP +   T LI   C   +  EA 
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +  MV+ G  PD+V Y+  I  L     VD AL LF  +  +G  PDVV Y  +++GL
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C + R  +A+ L   M+ + + P V T+N LI+ + K G +  A    + M++  S +P+
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM-SIAPN 280

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           + TYT+LI+GLC+ GR D+A  ++  ME KGC P+ + + +LI G CKC +   A+  F 
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M +KG+  +   +  LI  F     P +A EV   M
Sbjct: 341 EMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 5/216 (2%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           CF    A   LI        VE+A  +F ++ ++GL   N  +Y  L++        ++ 
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL-TGNTITYTTLIQGFGLVGKPNVA 370

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSIL 141
           +     M   G   +  T   LL   C +G+ +KAL +F ++    ID    +   +++L
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L      G+++KA  +   M   ++ +   T+ ++I G  K  +V  AL LF  +   G 
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGV 490

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             +   Y  +I GL +   +  A  L+ +MK  G++
Sbjct: 491 KPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 207/437 (47%), Gaps = 12/437 (2%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           T   ++  YC+ G+ D A SV  +I+  G+  D    + L+      G+V +A    + +
Sbjct: 85  TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                RLNE ++ +LI+G  K      ALQ+  K+      ++  MY  II  LCK K +
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLV 204

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLL 275
             A +LYS+M    ++PD    S LI      G+         E      + DV T  +L
Sbjct: 205 TEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNIL 264

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIIINTL 334
            ++    L   GS  +  N+L  M+K     +    +  +I K  V+P+  S+ III  L
Sbjct: 265 VDA----LCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K   +D ALSLF EM   G   +   Y++LIDGLC S R+  ++ELL +M   G     
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADV 380

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  S    LC+   V  A+ LV+K++ QG +P +    +LI  LCK G+   A     D
Sbjct: 381 ITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQD 440

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           ++ +G+   +  Y+  I GL      D A+ L   +  +GC PDVV Y  II  L K   
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDE 500

Query: 515 VAEAEDLFNEMITKGLI 531
             +AE L  EMI +GL+
Sbjct: 501 NHKAEKLLREMIARGLL 517



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 226/528 (42%), Gaps = 69/528 (13%)

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           V  N+  +  A+S+++ +  +      V F+ ++  +   GE+D A  ++ ++       
Sbjct: 57  VKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHP 116

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  T   LI G     +V +AL   D +   GF  +   Y ++I GLCK  +   ALQ+ 
Sbjct: 117 DTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVL 176

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            ++ G                                 + VNT  ++ ++I+  L     
Sbjct: 177 RKIDG---------------------------------KLVNTNVVMYSTIIDSLCKEKL 203

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +AY L   MI  +                VSP+  +F  +I      G+   A  LF 
Sbjct: 204 VTEAYELYSQMIVKK----------------VSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM       +V  +N L+D LC               +E   K T   L  M + + +  
Sbjct: 248 EMVLTNINPDVCTFNILVDALC---------------KEGSTKETKNVLAVMMKEVNQVN 292

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
                 N++ K RV    P V   T++IK LCK     EA     +M  +G  PD V YS
Sbjct: 293 KAKHVFNIIGKRRVT---PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYS 349

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I GL   +R+  A EL   + A G   DV+ Y   +  LCK  +V +A  L  ++  +
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQ 409

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P++ TYN+LI+G CK G  + A +    +L K      V TY  +I+GLC+ G  D+
Sbjct: 410 GIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIK-GYKVTVWTYNIMINGLCLEGLFDE 468

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           A+ L  +ME+ GC P+ +T+  +I  L K D    A    R M  +G+
Sbjct: 469 AMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 229/504 (45%), Gaps = 42/504 (8%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCK--NKQLEMALQLYSEMKGSGITPDFEIL 243
           V  A+  F +M +   +     ++ I+G L K  N    +A+ LY  ++ + ITP     
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 244 SKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + +I      GE+    ++L K +      +T+TL   ++++ L  NG + +A +    +
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITL--TTLIKGLCLNGKVHEALHFHDHV 144

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I        G  +          N  S+ I+IN L K G+   AL + R++       NV
Sbjct: 145 IAR------GFRL----------NEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNV 188

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y+ +ID LC    + E+YEL  +M      P   T +++    C       A  L  +
Sbjct: 189 VMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHE 248

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-----------------GFLP 462
           M +    P V    +L+  LCK G   E    L  M++E                    P
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTP 308

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+  Y+  I  L  IK VD AL LF ++   G  PD V Y+ +I GLCK++R++ A +L 
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELL 368

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           ++M  +G    V TY   ++  CK+  +D+A + L + ++ +   P++ TY  LIDGLC 
Sbjct: 369 DQMHARGQPADVITYTSFLHALCKNHQVDKA-VALVKKIKDQGIQPNINTYNILIDGLCK 427

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            GR ++A +++ ++  KG      T+  +I GLC       A+     M++ G  PD+  
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  +I A         A ++L+EM
Sbjct: 488 YETIIRALFKNDENHKAEKLLREM 511



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 189/419 (45%), Gaps = 57/419 (13%)

Query: 19  QDVVKSRCF-MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC 77
            D V +R F ++  + G LI  L  +G    A  +  ++  + L   N   Y+ ++++LC
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGK-LVNTNVVMYSTIIDSLC 199

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEH 136
           K   V        +M       D  T + L+  +C  GQF +A  +F+E ++ +   D  
Sbjct: 200 KEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVC 259

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+IL+ A  K G   +   ++  M                    + ++V+KA  +F+ +
Sbjct: 260 TFNILVDALCKEGSTKETKNVLAVM------------------MKEVNQVNKAKHVFNII 301

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGE 255
            K     D   Y +II  LCK K ++ AL L++EM+  GITPD    S LI   C  E  
Sbjct: 302 GKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER- 360

Query: 256 LTLLVKEIWE----------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
               +   WE            DV T T    S +  L  N  +D+A  L++       I
Sbjct: 361 ----ISHAWELLDQMHARGQPADVITYT----SFLHALCKNHQVDKAVALVK------KI 406

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            D G++          PN ++++I+I+ L K+G+ + A  +F+++   G    V+ YN +
Sbjct: 407 KDQGIQ----------PNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIM 456

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           I+GLC     +E+  LL +ME++G  P   T  ++ R L +  +   A  L+R+M  +G
Sbjct: 457 INGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +A ++    ++   + +   + K R      +   +I+ L  + +V+EA  LF++++ +G
Sbjct: 281 LAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKG 340

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  P+  +Y+ L++ LCKS  +      L +M   G   D  T T  L   C + Q DKA
Sbjct: 341 I-TPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKA 399

Query: 121 LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +++  +I D G   + + ++IL+    K G  + A  + + +     ++   T+ ++I+G
Sbjct: 400 VALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMING 459

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
              +   D+A+ L +KM  +G   D   Y+ II  L KN +   A +L  EM   G+
Sbjct: 460 LCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 245/542 (45%), Gaps = 37/542 (6%)

Query: 121 LSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           L+ F E+  HG   ++ E   +++L A       D    +   M    I  +  T+  L+
Sbjct: 181 LAAFREMAHHGVPPFIKE--CNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 178 HGFVKKSRVDKALQLFDKM--TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
             F ++ RVD+A +L  +M     G       Y+V+I GL +  +LE A QL   M+ S 
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 236 ITPDFEILSKLIT------SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
               F   + LIT      S    G L L +    E+  +    +  N+I+  +  +G++
Sbjct: 299 KASAF-TFNPLITGYFARGSVEKAGALQLEM----ENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           + A                 VEM  +    + P+  +++ +IN   K G L  AL LF +
Sbjct: 354 EAARMKF-------------VEMRAM---GLLPDLITYNSLINGYCKAGNLKEALWLFGD 397

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           + + G   +V  YN L+DG C    LEE+    +EM E G +P   T   +     + ++
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457

Query: 410 VVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +        +M  +G +P    +NT +  EL   G   EAF+    M+  G   D V Y+
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELIL-GSTSEAFQLTEVMISRGISSDTVTYN 516

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             + GL     +  A  L+  + + G  PD + Y  +I   C+  R+ EA D+F+ M+  
Sbjct: 517 IFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVS 576

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL PS  TY + I+ +C+ GN+  A     +MLE E   P+ +TY  LI  LC  GR + 
Sbjct: 577 GLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLE-EGVRPNEVTYNVLIHALCRMGRTNL 635

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A   ++EM E+G +PN+ T+  LI G CK      A+  +  M + G+ PD     AL  
Sbjct: 636 AYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFK 695

Query: 649 AF 650
            F
Sbjct: 696 GF 697



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 212/489 (43%), Gaps = 28/489 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFDKAL 121
           P+  +YN LL++  +   VD     L+EM+    G      T   ++      G+ +KA 
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            + + +          F+ L+  +   G V+KA  L   M++  I     T+  +IHG  
Sbjct: 289 QLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMF 348

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
           +   V+ A   F +M   G   D   Y+ +I G CK   L+ AL L+ ++K +G+ P   
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVL 408

Query: 240 -FEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            + IL        D  E     +E+ E     DV+T T+L N   ++           NL
Sbjct: 409 TYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV----------RNL 458

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
             AM++     +   EML   KG + P+  +++  I+  L  G    A  L   M   G 
Sbjct: 459 --AMVR-----EFFDEMLS--KG-LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +   YN  +DGLC S  L+++Y L  +M   G +P   T   +    C R  +  A +
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARD 568

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +   M V G  P     T+ I   C+ G    A+ +   M++EG  P+ V Y+  I  L 
Sbjct: 569 IFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALC 628

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            + R +LA + F ++   G  P+   Y ++I G CK     EA  L++EM   G+ P   
Sbjct: 629 RMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHC 688

Query: 536 TYNLLINGW 544
           T+N L  G+
Sbjct: 689 THNALFKGF 697



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 194/438 (44%), Gaps = 67/438 (15%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           R   L   AQ V + R      A  F  LI    + G VE+A  L  +++ EG+ VP   
Sbjct: 280 RKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGI-VPTVV 338

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN ++  + +S +V+   M+  EM+  G   D  T   L+  YC +G   +AL +F ++
Sbjct: 339 TYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL 398

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG------- 179
              G     + ++ILL  + + G++++A    + M +   + +  T+ +L++G       
Sbjct: 399 KRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNL 458

Query: 180 -------------------FVKKSRV---------DKALQLFDKMTKSGFASDAAMYDVI 211
                              F   +R+          +A QL + M   G +SD   Y++ 
Sbjct: 459 AMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIF 518

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN- 270
           + GLCK+  L+ A  L+ +M   G+ PD    + LI +  + G L    ++I++   V+ 
Sbjct: 519 LDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR-EARDIFDGMLVSG 577

Query: 271 ------TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                 T T+  ++  R     G++  AY   Q M+                +  V PN 
Sbjct: 578 LPPSAVTYTVFIHAYCR----RGNLYSAYGWFQKML----------------EEGVRPNE 617

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +++++I+ L + G+ +LA   F EM + G   N + Y  LIDG C     EE+  L  E
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677

Query: 385 MEESGFKPTHFTLNSMFR 402
           M + G  P H T N++F+
Sbjct: 678 MHQHGIHPDHCTHNALFK 695



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 35/204 (17%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           L L  FR++  HG  P +   N+++  L    R  +   ++ EM+  G+ PS+ TYN L+
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWN------ 594
           + + + G +DQA   L  M  +  G  P  +TY  +I+GL   G  + A  L +      
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 595 ----------------------------EMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
                                       EME +G  P  +T+  +I G+ +     AA +
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F  M+  G+ PD+  + +LI+ +
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGY 382


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 35/488 (7%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G+  +  T++ L++  C  G+   AL +F+++   G+  D  ++  L+ A  K  +  +A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL  RM       N  T+ ++I    K     K L++F +M   G   +  +Y  +I G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWED---RD 268
           LC+  +L  A+ L+ EM   GI  +    + LI +    G   E T    ++  +    D
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSF 327
           V T T L +     L   G + +AY + + MIK GE                 +PN  ++
Sbjct: 184 VVTFTTLIDH----LSKKGKVQEAYKIFELMIKQGE-----------------APNIVTY 222

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + ++N L    ++D A+ LF  M + G   +V  YN LI+G C S + EE+  L R+M+ 
Sbjct: 223 NSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQY 282

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG---K 444
               P+  T   + + L +   +  A  L   M++ G  P +   T+L+  LCK+G   +
Sbjct: 283 EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A++ FR L  +    + P I  YS  IGG+   +R + A+E+F +I   G  P++V YNI
Sbjct: 343 AIDVFRSLKSI---KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+GLCK  ++ EAE LF +M   G      ++N +I G+ +   + +AM  L RM EK 
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459

Query: 565 SGSPDVIT 572
               D +T
Sbjct: 460 FSPNDSVT 467



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 181/381 (47%), Gaps = 36/381 (9%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           S N  ++ ++I++L KDG     L +FREM  +G   NV +Y++LI+GLC   +L E+  
Sbjct: 76  SGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVN 135

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM   G K    T NS+    CR      A     +M  +G  P V   T LI  L 
Sbjct: 136 LFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLS 195

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K GK  EA++    M+++G  P+IV Y++ + GL    ++D A+ LF  +   G   DV+
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           +YN +I+G C + +  EA  LF +M  + L PS+ TY +L+    ++G I  A    + M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 561 LEKESGSPDVITYTTLIDGLCIAG-----------------------------------R 585
            +    SP + TYT L+DGLC  G                                   R
Sbjct: 316 -QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            + A+ +++E+   G  PN +T+  +I GLCK  +   A   F  M+E G + D   F  
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           +I  FL E     A E LK M
Sbjct: 435 IIRGFLQENQVQKAMEFLKRM 455



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 173/385 (44%), Gaps = 36/385 (9%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K    PN  +   ++  +  +GK+  AL LF +MT+ G   ++ LY  LI+ L  + +  
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + EL R M         FT   +   LC+    +  L + R+M   G  P V   + LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 437 KELCKHGKAMEAF-----------------------------------RFLTDMVQEGFL 461
             LC+ GK  EA                                    R  + MV EG L
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+V ++  I  L    +V  A ++F  +   G  P++V YN +++GLC   ++  A  L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F  M+ +G+   V +YN LING+C SG  ++AM  L R ++ E  +P + TYT L+  L 
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAM-TLFRKMQYEELTPSITTYTILLKALY 300

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             GR   A  L+N M+  G +P+  T+  L+ GLCK      A+  FR +K    KP + 
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
           ++  LI           A E+  E+
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEI 385



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 213/456 (46%), Gaps = 34/456 (7%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-SCSVDLVEMRLKEM 92
           G+LI  L        A  L  ++  E +C  N ++Y  ++++LCK   ++  ++M  +EM
Sbjct: 48  GYLINALRKTRQARRAVELHRRMLSE-ICSGNFFTYGLVIDSLCKDGLAIKGLKM-FREM 105

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEV 151
            + G   +    + L+   C  G+  +A+++F+E++  G   +   ++ L+ A  ++G  
Sbjct: 106 INMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLW 165

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A     +M    I  +  TF  LI    KK +V +A ++F+ M K G A +   Y+ +
Sbjct: 166 KEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSL 225

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI----TSCSDEGELTLLVKEIWED- 266
           + GLC + Q++ A++L+  M   GI  D    + LI    TS   E  +TL  K  +E+ 
Sbjct: 226 LNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEEL 285

Query: 267 -RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGE-PIADVGV------------- 310
              + T T+L    ++ L  NG I  A  L   M I G+ P  D                
Sbjct: 286 TPSITTYTIL----LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIE 341

Query: 311 EMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           E + +F+   S    P+   + I+I  + +  + + A+ +F E+  +G + N+  YN +I
Sbjct: 342 EAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMI 401

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +GLC   +L E+  L  +MEESG +    + N + R   +   V  A+  +++MR +   
Sbjct: 402 NGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFS 461

Query: 427 PWVKHNTLLIKELCKHGKAME-AFRFLTDMVQEGFL 461
           P      +L+       ++ E    FL ++VQ+  L
Sbjct: 462 PNDSVTLMLVNLYAADAQSSELPNNFLHELVQKKTL 497



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 1/211 (0%)

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           ++ G+ P++V  S  + G+    +V  ALELF  +   G   D++ Y  +I+ L K ++ 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             A +L   M+++    +  TY L+I+  CK G   + +     M+      P+VI Y++
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM-GICPNVIVYSS 119

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI+GLC  G+  +A+ L++EM  +G   N IT+ +LI   C+    + A   F  M  +G
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + PD+  F  LI     +     A+++ + M
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 169/337 (50%), Gaps = 8/337 (2%)

Query: 323 NTSSFDII-----INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           N+   D+I     IN L K G++  A+ +FREM + G   + F YN LI+GLC   +LE 
Sbjct: 85  NSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEM 144

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
              L+ EM+  GF PT  T  ++    C    V  A++++ +M  +G  P     T LI+
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204

Query: 438 ELCKHGKAMEAFRFLTDMVQEGF--LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
            LC  G+   A   L +M   G    P++V Y+  I GL      ++ +E   ++   GC
Sbjct: 205 GLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGC 264

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+   Y  +I GLC+     EA  L NEM+  G    V  YN LI+G CK G +D A  
Sbjct: 265 FPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFARE 324

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M+EK   +PDV TYT+LI GLC AG  D+A+ L  EM  KG  PN +T+  LI G 
Sbjct: 325 MQILMVEK-GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            + DR   AL     MK  G+ P   ++  L  +  S
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLYS 420



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 161/311 (51%), Gaps = 3/311 (0%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  Y+  I+GLC   ++ E+ E+ REMEE G  P  FT N +   LC+   +   ++L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M+ +G  P V   T LI   C  G+   A   L +M   G  P+ V Y+A I GL D 
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 478 KRVDLALELFRDICAHG--CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             V+ A+ + +++   G  CCP+VV Y  +I GLC+        +  +EMI  G  P+ A
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY  LI+G C+ G+  +A + L+ M+       DV+ Y +LIDGLC  G  D A  +   
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAI-GCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M EKG AP+  T+ +LI GLC       AL   + M+ KG+ P+   +  LI+ F     
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388

Query: 656 PPLAFEVLKEM 666
              A +++ EM
Sbjct: 389 TDHALQLVNEM 399



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 170/366 (46%), Gaps = 51/366 (13%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I+G  KK ++ +A+++F +M + G A D+  Y+++I GLCK+ QLEM + L  EM+  G 
Sbjct: 98  INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           +P     + LI                            C +        G +D A ++L
Sbjct: 158 SPTVVTYTTLIHG-------------------------FCTA--------GRVDAAMDIL 184

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-- 354
             M                 +G ++PNT ++  +I  L   G+++ A+ + +EM   G  
Sbjct: 185 DEMEH---------------RG-ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE 228

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  NV  Y  LI GLC     E   E L EM  SG  P + T  ++   LC++   + A 
Sbjct: 229 CCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAA 288

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+ +M   G E  V     LI  LCK G+   A      MV++G  PD+  Y++ I GL
Sbjct: 289 VLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGL 348

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
            D   +D AL L +++ A G  P+ V Y  +I+G  +A R   A  L NEM + GL+P+ 
Sbjct: 349 CDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAG 408

Query: 535 ATYNLL 540
             Y +L
Sbjct: 409 DIYKIL 414



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 123/246 (50%), Gaps = 1/246 (0%)

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           RR+ +  +L + R   +   +  V   +  I  LCK G+  EA     +M ++G  PD  
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I GL    ++++ + L  ++ A G  P VV Y  +I G C A RV  A D+ +EM
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM-LEKESGSPDVITYTTLIDGLCIAG 584
             +G+ P+  TY  LI G C  G +++A+L L  M L      P+V+TYT LI GLC  G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             +  +   +EM   GC PN  T+ ALI GLC+      A V    M   G + D+ ++ 
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307

Query: 645 ALISAF 650
           +LI   
Sbjct: 308 SLIDGL 313



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 38/281 (13%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           KG+ +P++ +++I+IN L KD +L++ +SL  EM   G    V  Y  LI G C + R++
Sbjct: 120 KGS-APDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVD 178

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE---------- 426
            + ++L EME  G  P   T  ++ + LC   +V  A+ ++++M+++G+E          
Sbjct: 179 AAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQ 238

Query: 427 ---------------------------PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                                      P     T LI  LC+ G  +EA   L +MV  G
Sbjct: 239 LIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG 298

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D+V Y++ I GL  +  +D A E+   +   G  PDV  Y  +I GLC A  + EA 
Sbjct: 299 CELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEAL 358

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            L  EM  KG++P+  TY  LING+ ++   D A+  ++ M
Sbjct: 359 GLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM 399



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 155/327 (47%), Gaps = 16/327 (4%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +S  +    K G++ +A E+   M++     +  T+ +LI+G  K ++++  + L D+M 
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             GF+     Y  +I G C   +++ A+ +  EM+  GITP+    + LI    D GE+ 
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML--MI 315
             +  + E      M L  N     +V+       Y  L   +  + + ++G+E L  MI
Sbjct: 214 RAILVLKE------MKLRGNECCPNVVT-------YTQLIHGLCQKGLFEMGMEFLDEMI 260

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G   PN +++  +I+ L + G    A  L  EM  IGC  +V +YN+LIDGLC    L
Sbjct: 261 ISGCF-PNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGEL 319

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           + + E+   M E G  P  FT  S+ + LC    +  AL L+++MR +G  P     T L
Sbjct: 320 DFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTL 379

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLP 462
           I    +  +   A + + +M   G +P
Sbjct: 380 INGFTQADRTDHALQLVNEMKSNGLMP 406



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 29/346 (8%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SY+  +  LCK   +       +EM++ G   D +T   L+   C   Q +  +S+ +E+
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G+    V ++ L+  F   G VD A ++++ M+   I  N  T+  LI G      V
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 187 DKALQLFDKMTKSGFA--SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           ++A+ +  +M   G     +   Y  +I GLC+    EM ++   EM  SG  P+    +
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272

Query: 245 KLITSCSDEG---ELTLLVKE---IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            LI     +G   E  +L+ E   I  + DV    ++ NS++  L   G +D A  +   
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDV----VIYNSLIDGLCKMGELDFAREM--- 325

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                       ++LM+ KG V+P+  ++  +I  L   G LD AL L +EM   G + N
Sbjct: 326 ------------QILMVEKG-VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPN 372

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
              Y  LI+G   ++R + + +L+ EM+ +G  P       +F+ L
Sbjct: 373 SVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 36/338 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  +F +++ +G   P++++YN L+  LCK   +++    + EMQ  G+     T
Sbjct: 105 GQIAEAMEIFREMEEKG-SAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVT 163

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L+  +C +G+ D A+ + +E+   G     V ++ L+      GEV++A  +++ M 
Sbjct: 164 YTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM- 222

Query: 163 DCNIRLNE-----KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              +R NE      T+  LIHG  +K   +  ++  D+M  SG   + A Y  +I GLC+
Sbjct: 223 --KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL------TLLVKEIWEDRDVNT 271
                 A  L +EM   G   D  I + LI      GEL       +L+ E     DV T
Sbjct: 281 KGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFT 340

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            T    S+++ L   G +D+A  L+Q M                 KG V PN+ ++  +I
Sbjct: 341 YT----SLIQGLCDAGLLDEALGLMQEMRA---------------KGIV-PNSVTYTTLI 380

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           N   +  + D AL L  EM   G M    +Y  L   L
Sbjct: 381 NGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 255/559 (45%), Gaps = 60/559 (10%)

Query: 5   LSRARRIAPLR-VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           L RARR A  R ++ +D V    F      G   R L  +G  +EA  L   + R G CV
Sbjct: 137 LPRARRFALYRRMVHRDRVPPTTF----TFGVAARALCRLGRADEALALLRGMARHG-CV 191

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   Y  ++ ALC    V      L EM   G   D  T   +++  C  G+  +A  +
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARL 251

Query: 124 FNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + ++  G +     +  LL    +  + D+A  ++ R+ + N+ L    F  +I G + 
Sbjct: 252 VDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL----FNTVIGGCLA 307

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + ++ +A +L++ M   G   DA  Y +++ GLCK  ++  A++L  EM+  G  P+   
Sbjct: 308 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN--- 364

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                     V T T++ +S  +    NG  D    LL+ M   
Sbjct: 365 --------------------------VVTYTIVLHSFCK----NGMWDDTRALLEEMSA- 393

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG ++ N+  ++ +I  L KDG++D A+ L +EM   GC  ++  Y
Sbjct: 394 --------------KG-LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 438

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I  LCN+ ++EE+  +   + E G      T N++   L R      A+ L ++M +
Sbjct: 439 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G    V     LIK +CK G    +   L +M ++G  P+ V Y+  I  L   +RV  
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 558

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           ALEL + +   G  PD+V YN +I+GLCK   +  A +L  ++  + + P + TYN+LI+
Sbjct: 559 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618

Query: 543 GWCKSGNIDQAMLCLSRML 561
             CK   +D A + L+R +
Sbjct: 619 WHCKVRLLDDAAMLLNRAM 637



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 240/505 (47%), Gaps = 40/505 (7%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
           +T     +  C  G+ D+AL++   +  HG V + V +  ++ A    G V +A  L+  
Sbjct: 160 FTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNE 219

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M       +  TF  ++ G     RV +A +L D+M   G       Y  ++ GLC+ +Q
Sbjct: 220 MLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ 279

Query: 221 LEMALQLYSEMKGSGITPDFEIL--SKLITSCSDEGELTLLVKEIWE-------DRDVNT 271
            + A  +       G  P+  ++  + +I  C  EG+L     E++E         D +T
Sbjct: 280 ADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAE-ATELYETMGLKGCQPDAHT 332

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++L + + ++    G I  A  LL+ M K               KG  +PN  ++ I++
Sbjct: 333 YSILMHGLCKL----GRIGSAVRLLREMEK---------------KG-FAPNVVTYTIVL 372

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           ++  K+G  D   +L  EM+  G   N   YN +I  LC   R++E+  L++EM   G  
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFR 450
           P   + N++   LC  + +  A ++   +  +G     + +NT+ I  L + G+  +A R
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI-IHALLRDGRWQDAVR 491

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +M+  G   D+V Y+  I  +     VD +L L  ++   G  P+ V+YNI+IS LC
Sbjct: 492 LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 551

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K +RV +A +L  +M+ +GL P + TYN LING CK G +  A+  L + L  E+  PD+
Sbjct: 552 KERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK-LHNENVHPDI 610

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNE 595
           ITY  LI   C     DDA ML N 
Sbjct: 611 ITYNILISWHCKVRLLDDAAMLLNR 635



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 210/478 (43%), Gaps = 21/478 (4%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF V      +  R D+AL L   M + G   DA +Y  +I  LC    +  A  L +EM
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G   D      ++      G              V     L + +M      G +  
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGR-------------VREAARLVDRMMTKGCMPGVMTY 267

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSSFDIIINTLLKDGKLDLALSLFREM 350
            + LLQ + +    AD    ML    G V   N   F+ +I   L +GKL  A  L+  M
Sbjct: 268 GF-LLQGLCRVR-QADEARAML----GRVPELNVVLFNTVIGGCLAEGKLAEATELYETM 321

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              GC  +   Y+ L+ GLC   R+  +  LLREME+ GF P   T   +    C+    
Sbjct: 322 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 381

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                L+ +M  +G     +    +I  LCK G+  EA   + +M  +G  PDI  Y+  
Sbjct: 382 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L + ++++ A  +F ++   G   + + YN II  L +  R  +A  L  EMI  G 
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
              V +YN LI   CK GN+D++++ L  M EK    P+ ++Y  LI  LC   R  DA+
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI-KPNNVSYNILISELCKERRVRDAL 560

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            L  +M  +G AP+ +T+  LI GLCK     AAL     +  + + PD+  +  LIS
Sbjct: 561 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 182/425 (42%), Gaps = 79/425 (18%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +  V P T +F +    L + G+ D AL+L R M + GC+ +  LY  +I  LC+  
Sbjct: 149 MVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQG 208

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            + E+  LL EM   G      T + + R +C    V  A  LV +M  +G  P V    
Sbjct: 209 GVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG 268

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPD--IVCYSAAIGGLIDIKRVDLALELFRDIC 491
            L++ LC+  +A EA   L      G +P+  +V ++  IGG +   ++  A EL+  + 
Sbjct: 269 FLLQGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMG 322

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS---- 547
             GC PD   Y+I++ GLCK  R+  A  L  EM  KG  P+V TY ++++ +CK+    
Sbjct: 323 LKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWD 382

Query: 548 -------------------------------GNIDQAMLCLSRMLEKESGSPDV------ 570
                                          G +D+AM  +  M   +  +PD+      
Sbjct: 383 DTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYNTI 441

Query: 571 -----------------------------ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
                                        ITY T+I  L   GR  DA+ L  EM   GC
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
           + + +++  LI  +CK      +LV    M EKG+KP+   +  LIS    E     A E
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 561

Query: 662 VLKEM 666
           + K+M
Sbjct: 562 LSKQM 566



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 28/58 (48%)

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           RM+ ++   P   T+      LC  GR D+A+ L   M   GC P+ + +  +I  LC
Sbjct: 148 RMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALC 205


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 267/588 (45%), Gaps = 47/588 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P   + N L++ LC    +   E  L+ ++  G   D  +   L+  YC  G    A  V
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                  G  +   ++ L+  + + G +  A  LI  M    +  +  T+  ++ G    
Sbjct: 176 LEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFA 232

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            + ++A +L  +M ++    +   +   I   C+N  L+ A++L  +M   G  PD  I 
Sbjct: 233 KQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIY 292

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-------NSIMRILVSNGSIDQAYNLL 296
           S L+   S+ G +   +K +         T+LC       N+ ++ L   G  D+   L+
Sbjct: 293 STLVNGFSEHGRVDDALKLL--------STMLCRPNTVCYNAALKGLCIAGRWDEVGELI 344

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             M++ +                  PN ++F  +IN+L ++   + A+ +  +M + G M
Sbjct: 345 AEMVRKD----------------CPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYM 388

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN +I         +++ +LL  M     KP   + N++ +CLCR +    A  L
Sbjct: 389 PDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAEL 445

Query: 417 VRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           + KM +   H   +  N +LI  LC++G+  +A      M +    PDIV YS+ I G  
Sbjct: 446 MAKMLKEDCHTNEMTFN-ILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFS 504

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           +     +A +LFR +    C  D+ +YN  + GLC A R  +A +L  +M+TK  +P+  
Sbjct: 505 EQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEV 561

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           T+N+LIN  C+ G +++A+    +M  K   +PD+ TY  LI+G    G  DDA+   + 
Sbjct: 562 TFNILINSLCQKGLVNRAIEVYEQM-PKYGITPDIFTYNALINGYSEQGCLDDALKFLST 620

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           M    C P+ I++ +++ GLC+ +R + A      M  K   P+   F
Sbjct: 621 MP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 237/510 (46%), Gaps = 62/510 (12%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           +LI     + R+  A ++ + +  SG A+DA  ++ ++ G C++  L  A ++    + S
Sbjct: 124 ILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERVLEAARAS 182

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G   +    + LI      G LT  ++ I     V   T   N++++ L      ++A  
Sbjct: 183 GAA-NVVTYTALIDGYCRSGRLTDALRLI-ASMPVAPDTYTYNTVLKGLCFAKQWEEAEE 240

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L++ MI+                    PN  +F   I    ++G LD A+ L  +M + G
Sbjct: 241 LMREMIRN----------------NCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG 284

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVG 412
           CM +V +Y+ L++G     R++++ +LL  M     +P     N+  +  C+  R D VG
Sbjct: 285 CMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVG 341

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
              L+ +M  +   P     + LI  LC++  A  A   L  M + G++PD+V Y+  I 
Sbjct: 342 --ELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIIS 399

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
              +    D AL+L   +    C PD +++N ++  LC+A+R  +A +L  +M+ +    
Sbjct: 400 CFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHT 456

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG------------- 579
           +  T+N+LI+  C++G +  A+  +  ++ K   +PD++TY++LI+G             
Sbjct: 457 NEMTFNILIDSLCQNGQVKDAIE-MFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDL 515

Query: 580 -------------------LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
                              LC+A R DDA  L  +M  K C PN +TF  LI  LC+   
Sbjct: 516 FRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGL 575

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              A+  +  M + G+ PD+F + ALI+ +
Sbjct: 576 VNRAIEVYEQMPKYGITPDIFTYNALINGY 605



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 175/350 (50%), Gaps = 10/350 (2%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           + + + N  ++  +I+   + G+L  AL L   M       + + YN ++ GLC + + E
Sbjct: 180 RASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWE 236

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ EL+REM  +   P   T  +  R  C+   +  A+ L+ +M   G  P V   + L+
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLV 296

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               +HG+  +A + L+ M+     P+ VCY+AA+ GL    R D   EL  ++    C 
Sbjct: 297 NGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCP 353

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+   ++ +I+ LC+ +    A ++  +M   G +P V +YN +I+ + +    D A+  
Sbjct: 354 PNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKL 413

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L+ ML K    PD I++  ++  LC A R  DA  L  +M ++ C  N +TF  LI  LC
Sbjct: 414 LNSMLCK----PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLC 469

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  + + A+  F +M +    PD+  + +LI+ F  +    +AF++ + M
Sbjct: 470 QNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM 519



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 9/308 (2%)

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V   N LI  LC   RL ++  +L  ++ SG      + N++    CR   +  A  ++ 
Sbjct: 119 VITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERVLE 177

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             R  G    V + T LI   C+ G+  +A R +  M      PD   Y+  + GL   K
Sbjct: 178 AARASGAANVVTY-TALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCFAK 233

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           + + A EL R++  + C P+ V +   I   C+   +  A +L  +M   G +P V  Y+
Sbjct: 234 QWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYS 293

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L+NG+ + G +D A+  LS ML +    P+ + Y   + GLCIAGR D+   L  EM  
Sbjct: 294 TLVNGFSEHGRVDDALKLLSTMLCR----PNTVCYNAALKGLCIAGRWDEVGELIAEMVR 349

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           K C PN  TF  LI  LC+      A+     M++ G  PD+  +  +IS F  +     
Sbjct: 350 KDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADD 409

Query: 659 AFEVLKEM 666
           A ++L  M
Sbjct: 410 ALKLLNSM 417



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 197/459 (42%), Gaps = 32/459 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           EEA  L  ++ R   C PN  ++   + A C++  +D     L++M  YG   D    + 
Sbjct: 236 EEAEELMREMIRNN-CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYST 294

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+  +   G+ D AL + + ++     +   ++  L      G  D+  ELI  M   + 
Sbjct: 295 LVNGFSEHGRVDDALKLLSTMLCRP--NTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N+ TF  LI+   +    + A+++ ++M K G+  D   Y+ II    +    + AL+
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412

Query: 227 LYSEMKGSGITPDFEILSKLITSCS---DEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           L + M     T  F  + K +       D  E  L+ K + ED   N MT   N ++  L
Sbjct: 413 LLNSMLCKPDTISFNAVLKCLCRAERWYDAAE--LMAKMLKEDCHTNEMTF--NILIDSL 468

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
             NG +  A  + + M K                   +P+  ++  +IN   + G   +A
Sbjct: 469 CQNGQVKDAIEMFELMPKYR----------------CTPDIVTYSSLINGFSEQGLDKVA 512

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LFR M    C  ++F YN  + GLC + R +++ EL+ +M      P   T N +   
Sbjct: 513 FDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINS 569

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC++  V  A+ +  +M   G  P +     LI    + G   +A +FL+ M  E   PD
Sbjct: 570 LCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PD 626

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            + Y++ + GL   +R   A +L  ++    C P+ V +
Sbjct: 627 TISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 10/172 (5%)

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P V+  NI+I  LC  +R+A+AE +   + T G   +V ++N L+ G+C+ G++  A   
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAADAV-SHNTLVAGYCRDGSLWDA--- 172

Query: 557 LSRMLE--KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             R+LE  + SG+ +V+TYT LIDG C +GR  DA+ L   M     AP+  T+  ++ G
Sbjct: 173 -ERVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKG 228

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LC   +   A    R M      P+   F   I AF        A E+L++M
Sbjct: 229 LCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 280



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           +   ++ D V ++  C+PN  ++N L+ +LC+   V+      ++M  YG   D +T   
Sbjct: 543 DAGELIADMVTKD--CLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNA 600

Query: 107 LLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L+  Y   G  D AL   + +  +   +  +     L    +W + +K   L+  M   N
Sbjct: 601 LINGYSEQGCLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEK---LVTEMLRKN 657

Query: 166 IRLNEKTFCVLIHGFVK 182
              NE TF      F+K
Sbjct: 658 CTPNEVTFKYANQLFIK 674


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 270/583 (46%), Gaps = 40/583 (6%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           P       + L   GL+ EA   FD++   G+ +    + +C L   C S   D++ M L
Sbjct: 39  PHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALS---AGSCNLYLTCLSSKRDMLGMVL 95

Query: 90  KEMQDYG-----WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLV 143
           K   ++      W  + Y +  L+      G+  +A  +   +   G + + V ++ ++ 
Sbjct: 96  KVFSEFPQLGVCWNTESYNI--LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            +   GE+ K  +L++ M    ++ N  T+  +I    K  +V +  ++  +M K G   
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL------- 256
           D  +Y  +I G CK    + A +L+SEM+   I PD    S LI   S  G++       
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             ++K+ +E  +V T T L +   ++    G + +A+ L   M++      +G+      
Sbjct: 274 NEMIKKGFEPDEV-TYTALIDGYCKL----GEMKKAFFLHNQMVQ------IGL------ 316

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
               +PN  ++  + + L K G+LD A  L  EM + G   N+  YN +++GLC +  + 
Sbjct: 317 ----TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ +L+ EM+E+G  P   T  ++     +  ++V A  L+R+M  +G +P V    +L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC  GK  +  R L  M+++G +P+   Y++ +        + ++ E++R +CA G  
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD   YNI+I G CKA+ + EA  L  EM+ K    + ++YN LI G+ K   + +A   
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
              M  +E        Y   +D     G  +  + L +E  EK
Sbjct: 553 FEEM-RREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 174/327 (53%), Gaps = 1/327 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L + L +F E  Q+G   N   YN L++ L    ++ E++ LL  ME  G  P   +  +
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C   ++   + LV++M+++G +P +   + +I  LCK GK +E  + L +M++ G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD V Y+  I G   +     A +LF ++ A    PD +A++ +I GL  + +V EA+
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LFNEMI KG  P   TY  LI+G+CK G + +A    ++M++    +P+V+TYT L DG
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQI-GLTPNVVTYTALADG 329

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC +G  D A  L +EM  KG   N  T+  ++ GLCK      A+     MKE G+ PD
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  L+ A+        A E+L+EM
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREM 416



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 172/328 (52%), Gaps = 1/328 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           NT S++I++N+L + GK+  A  L   M   GC+ +V  Y  +IDG C+   L++  +L+
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           +EM+  G KP  +T +S+   LC+   VV    ++R+M  +G  P     T LI   CK 
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A++  ++M     +PD + +SA I GL    +V  A +LF ++   G  PD V Y
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I G CK   + +A  L N+M+  GL P+V TY  L +G CKSG +D A   L  M  
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           K     ++ TY T+++GLC AG    A+ L  EM+E G  P+ IT+  L+    K     
Sbjct: 349 K-GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAF 650
            A    R M ++G++P +  F  L++  
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGL 435



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 225/515 (43%), Gaps = 56/515 (10%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC-KNKQLEMALQLYSEM 231
           F V     V+   +++A + FDK+   G A  A   ++ +  L  K   L M L+++SE 
Sbjct: 42  FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEF 101

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G+                           W     N   +L NS+ R+    G I +
Sbjct: 102 PQLGVC--------------------------WNTESYN---ILMNSLFRL----GKIRE 128

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGT--------------------VSPNTSSFDIII 331
           A++LL  M     I DV V    I  G                     + PN  ++  II
Sbjct: 129 AHHLLMRMEFKGCIPDV-VSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSII 187

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L K GK+     + REM + G   +  +Y  LIDG C     + +Y+L  EME     
Sbjct: 188 LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P     +++   L     VV A  L  +M  +G EP     T LI   CK G+  +AF  
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              MVQ G  P++V Y+A   GL     +D A EL  ++C  G   ++  YN I++GLCK
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A  + +A  L  EM   GL P   TY  L++ + K+G + +A   L  ML++    P V+
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR-GLQPTVV 426

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           T+  L++GLC++G+ +D   L   M EKG  PN  T+ +++   C  +  R +   +R M
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +G+ PD   +  LI       N   A+ + KEM
Sbjct: 487 CAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 251/573 (43%), Gaps = 21/573 (3%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFS-KWGEVDKA 154
           WG D +      QV   +G  ++A   F++++++G  +     ++ L   S K   +   
Sbjct: 35  WGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMV 94

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++        +  N +++ +L++   +  ++ +A  L  +M   G   D   Y  II G
Sbjct: 95  LKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDG 154

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
            C   +L+  +QL  EM+  G+ P+    S +I      G++    K + E   R V   
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            ++  +++      G+   AY L   M   E                + P++ +F  +I 
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEARE----------------IVPDSIAFSALIC 258

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L   GK+  A  LF EM + G   +   Y  LIDG C    +++++ L  +M + G  P
Sbjct: 259 GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP 318

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T  ++   LC+  ++  A  L+ +M  +G +  +     ++  LCK G  ++A + +
Sbjct: 319 NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M + G  PD + Y+  +        +  A EL R++   G  P VV +N++++GLC +
Sbjct: 379 EEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMS 438

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            ++ + E L   M+ KG++P+ ATYN ++  +C   N+ +    + R +  +   PD  T
Sbjct: 439 GKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM-RISTEIYRGMCAQGVVPDSNT 497

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y  LI G C A    +A  L  EM EK       ++ ALI G  K  +   A   F  M+
Sbjct: 498 YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557

Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
            +G+     ++   +     E N     E+  E
Sbjct: 558 REGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 234/508 (46%), Gaps = 24/508 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +G + EA+ L  +++ +G C+P+  SY  +++  C    +  V   +KEMQ  
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKG-CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + YT + ++ + C SG+  +   V  E++  G   +HV ++ L+  F K G    A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L   M+   I  +   F  LI G     +V +A +LF++M K GF  D   Y  +I G
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVN 270
            CK  +++ A  L+++M   G+TP+    + L       GEL     LL +   +   +N
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             T   N+I+  L   G+I QA  L++ M       + G+           P+T ++  +
Sbjct: 355 ISTY--NTIVNGLCKAGNILQAVKLMEEM------KEAGLH----------PDTITYTTL 396

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           ++   K G++  A  L REM   G    V  +N L++GLC S +LE+   LL+ M E G 
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T NS+ +  C R ++  +  + R M  QG  P      +LIK  CK     EA+ 
Sbjct: 457 MPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWF 516

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
              +MV++ F      Y+A I G    K++  A +LF ++   G       YN+ +    
Sbjct: 517 LHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNY 576

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +   +    +L +E I K L+      N
Sbjct: 577 EEGNMETTLELCDEAIEKCLLDKARNGN 604


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 66/614 (10%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA-CELIER 160
           +T   L+  Y    + D  L++   ++ +G   +     L+  F K GEVDKA C  +E 
Sbjct: 177 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEM 236

Query: 161 MDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           M+     L +   C  +I    K   +DKA  +  KM  SG A D   Y +II GLCK+K
Sbjct: 237 MEQG--VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CN 277
            ++ A ++  +M  +G  P+    + LI   S  G     V+   +      +  +  CN
Sbjct: 295 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------------GVEMLMI 315
           S +  L  +G  ++A  +  +M+   P  D+                       +  LM+
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 414

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG ++PN   F+I+IN   + G +D A+ +F +M   G + +   +  +I  LC   RL
Sbjct: 415 TKG-IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 473

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTL 434
           +++      M + G  P+      + +  C   ++V A  L+ +M  +    P VK+ + 
Sbjct: 474 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 533

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS----------------------AAIG 472
           +I  LCK G+  E    +  MVQ G  P++V ++                      A+IG
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593

Query: 473 -------------GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                        G     R+D AL +FRD+   G  P  V Y+II+ GL +A+R   A+
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F+EMI  G   S+ TY +++ G C++   D+A + L ++        D+IT+  +I  
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV-KFDIITFNIVISA 712

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   GR  +A  L++ +   G  PN  T+  +IT L K +    A   F  +++ G   D
Sbjct: 713 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 772

Query: 640 MFVFVALISAFLSE 653
             +   ++   L++
Sbjct: 773 SRLLNHIVRMLLNK 786



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 225/525 (42%), Gaps = 68/525 (12%)

Query: 154 ACELIERMDDCNIRLNE----KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           A EL +RMD      +      T+ +LI  + +  R D  L +  ++ K+G   D   Y 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +I G   K+ +++ A  L+ EM   G+ P                               
Sbjct: 216 LIYG-FVKDGEVDKAHCLFLEMMEQGVLPKI----------------------------- 245

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               L+CNSI++ L     +D+A +++Q M+      D G+          +P+  ++ +
Sbjct: 246 ----LICNSIIKELCKMKEMDKAESIVQKMV------DSGI----------APDLFTYSL 285

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           II+ L K   +D A  +  +M + G   N   YN+LI G   S    ES  + ++M   G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEA 448
             PT    NS    L +      A  +   M ++G +P  + ++T+L      HG A   
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML------HGYATAT 399

Query: 449 FRFLTD-------MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
              L D       M+ +G  P+   ++  I        +D A+ +F D+   G  PD V 
Sbjct: 400 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 459

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +IS LC+  R+ +A   FN M+  G+ PS A Y  LI G C  G + +A   +S M+
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 519

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K+   P V  ++++I+ LC  GR  +   + + M + G  PN +TF +L+ G C     
Sbjct: 520 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 579

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A      M   G++P+ +++  L+  +        A  V ++M
Sbjct: 580 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 624



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 244/535 (45%), Gaps = 26/535 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A+ LF ++  +G+ +P     N +++ LCK   +D  E  +++M D G   D +T
Sbjct: 224 GEVDKAHCLFLEMMEQGV-LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 282

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C S   DKA  V  ++++ G     + ++ L+  +S  G  +++  + ++M 
Sbjct: 283 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 342

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-- 220
            C +          IH   K  R ++A  +FD M   G   D   Y  ++ G        
Sbjct: 343 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 402

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L     +++ M   GI P+  + + LI + +  G +   +L+ E  +++ +   T+   +
Sbjct: 403 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 462

Query: 279 IMRILVSNGSIDQAYNLLQAMIK-GEPIADV-----------------GVEML--MIFKG 318
           ++  L   G +D A +    M+  G P ++                    E++  M+ K 
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P    F  IIN L K+G++     +   M Q G   NV  +N+L++G C    +EE+
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + LL  M   G +P  +   ++    C+   +  AL + R M  +G +P     ++++  
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L +  +   A +   +M++ G    I  Y   +GGL      D A  L   + A     D
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           ++ +NI+IS + K  R  EA++LF+ + T GL+P++ TY+++I    K  + ++A
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 757



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/502 (22%), Positives = 219/502 (43%), Gaps = 59/502 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ ++Y+ +++ LCKS ++D  E  L++M + G   +  T   L+  Y  SG +++++ 
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336

Query: 123 VFNE-------------------IIDHGWVDEH--VFSILLVAFSK------------WG 149
           VF +                   +  HG  +E   +F  +++   K            + 
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 396

Query: 150 EVDKAC-----ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               +C      +   M    I  N+  F +LI+ + +   +DKA+ +F+ M   G   D
Sbjct: 397 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 456

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              +  +I  LC+  +L+ AL  ++ M   G+ P   +   LI  C + GEL    + I 
Sbjct: 457 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 516

Query: 265 E--DRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTV 320
           E  ++D+    +   +SI+  L   G + +  +++  M++ G+                 
Sbjct: 517 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ----------------- 559

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F+ ++      G ++ A +L   M  IG   N ++Y  L+DG C + R++++  
Sbjct: 560 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 619

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           + R+M   G KPT    + +   L + +    A  +  +M   G    +    +++  LC
Sbjct: 620 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 679

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           ++    EA   L  +       DI+ ++  I  +  + R   A ELF  I  +G  P++ 
Sbjct: 680 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 739

Query: 501 AYNIIISGLCKAQRVAEAEDLF 522
            Y+++I+ L K +   EA++LF
Sbjct: 740 TYSMMITNLIKEESYEEADNLF 761



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/427 (22%), Positives = 187/427 (43%), Gaps = 23/427 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M D 
Sbjct: 428 LINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G V +
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 546

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  ++ 
Sbjct: 547 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 606

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +  T
Sbjct: 607 GYCKNGRIDDALTVFRDMLHKGVKPT-SVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 665

Query: 274 LLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           +  ++   ++  L  N   D+A  LL+ +                F   V  +  +F+I+
Sbjct: 666 VSIHTYGVVLGGLCRNNCTDEANMLLEKL----------------FAMNVKFDIITFNIV 709

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ + K G+   A  LF  ++  G + N+  Y+ +I  L      EE+  L   +E+SG 
Sbjct: 710 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                 LN + R L  + +V  A N +  +            +LL     + GK  E  +
Sbjct: 770 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIK 829

Query: 451 FLTDMVQ 457
            L    Q
Sbjct: 830 LLPAKYQ 836


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 66/614 (10%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA-CELIER 160
           +T   L+  Y    + D  L++   ++ +G   +     L+  F K GEVDKA C  +E 
Sbjct: 157 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEM 216

Query: 161 MDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           M+     L +   C  +I    K   +DKA  +  KM  SG A D   Y +II GLCK+K
Sbjct: 217 MEQG--VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 274

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CN 277
            ++ A ++  +M  +G  P+    + LI   S  G     V+   +      +  +  CN
Sbjct: 275 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 334

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------------GVEMLMI 315
           S +  L  +G  ++A  +  +M+   P  D+                       +  LM+
Sbjct: 335 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 394

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG ++PN   F+I+IN   + G +D A+ +F +M   G + +   +  +I  LC   RL
Sbjct: 395 TKG-IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTL 434
           +++      M + G  P+      + +  C   ++V A  L+ +M  +    P VK+ + 
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS----------------------AAIG 472
           +I  LCK G+  E    +  MVQ G  P++V ++                      A+IG
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 473 -------------GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                        G     R+D AL +FRD+   G  P  V Y+II+ GL +A+R   A+
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 633

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F+EMI  G   S+ TY +++ G C++   D+A + L ++        D+IT+  +I  
Sbjct: 634 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF-DIITFNIVISA 692

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   GR  +A  L++ +   G  PN  T+  +IT L K +    A   F  +++ G   D
Sbjct: 693 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 752

Query: 640 MFVFVALISAFLSE 653
             +   ++   L++
Sbjct: 753 SRLLNHIVRMLLNK 766



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 225/525 (42%), Gaps = 68/525 (12%)

Query: 154 ACELIERMDDCNIRLNE----KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           A EL +RMD      +      T+ +LI  + +  R D  L +  ++ K+G   D   Y 
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +I G   K+ +++ A  L+ EM   G+ P                               
Sbjct: 196 LIYG-FVKDGEVDKAHCLFLEMMEQGVLPKI----------------------------- 225

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               L+CNSI++ L     +D+A +++Q M+      D G+          +P+  ++ +
Sbjct: 226 ----LICNSIIKELCKMKEMDKAESIVQKMV------DSGI----------APDLFTYSL 265

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           II+ L K   +D A  +  +M + G   N   YN+LI G   S    ES  + ++M   G
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 325

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEA 448
             PT    NS    L +      A  +   M ++G +P  + ++T+L      HG A   
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML------HGYATAT 379

Query: 449 FRFLTD-------MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
              L D       M+ +G  P+   ++  I        +D A+ +F D+   G  PD V 
Sbjct: 380 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 439

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +IS LC+  R+ +A   FN M+  G+ PS A Y  LI G C  G + +A   +S M+
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 499

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K+   P V  ++++I+ LC  GR  +   + + M + G  PN +TF +L+ G C     
Sbjct: 500 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 559

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A      M   G++P+ +++  L+  +        A  V ++M
Sbjct: 560 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 604



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 244/535 (45%), Gaps = 26/535 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A+ LF ++  +G+ +P     N +++ LCK   +D  E  +++M D G   D +T
Sbjct: 204 GEVDKAHCLFLEMMEQGV-LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 262

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C S   DKA  V  ++++ G     + ++ L+  +S  G  +++  + ++M 
Sbjct: 263 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 322

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-- 220
            C +          IH   K  R ++A  +FD M   G   D   Y  ++ G        
Sbjct: 323 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 382

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L     +++ M   GI P+  + + LI + +  G +   +L+ E  +++ +   T+   +
Sbjct: 383 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 442

Query: 279 IMRILVSNGSIDQAYNLLQAMIK-GEPIADV-----------------GVEML--MIFKG 318
           ++  L   G +D A +    M+  G P ++                    E++  M+ K 
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P    F  IIN L K+G++     +   M Q G   NV  +N+L++G C    +EE+
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + LL  M   G +P  +   ++    C+   +  AL + R M  +G +P     ++++  
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L +  +   A +   +M++ G    I  Y   +GGL      D A  L   + A     D
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           ++ +NI+IS + K  R  EA++LF+ + T GL+P++ TY+++I    K  + ++A
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 737



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/502 (22%), Positives = 219/502 (43%), Gaps = 59/502 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ ++Y+ +++ LCKS ++D  E  L++M + G   +  T   L+  Y  SG +++++ 
Sbjct: 257 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 316

Query: 123 VFNE-------------------IIDHGWVDEH--VFSILLVAFSK------------WG 149
           VF +                   +  HG  +E   +F  +++   K            + 
Sbjct: 317 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 376

Query: 150 EVDKAC-----ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               +C      +   M    I  N+  F +LI+ + +   +DKA+ +F+ M   G   D
Sbjct: 377 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 436

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              +  +I  LC+  +L+ AL  ++ M   G+ P   +   LI  C + GEL    + I 
Sbjct: 437 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 496

Query: 265 E--DRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTV 320
           E  ++D+    +   +SI+  L   G + +  +++  M++ G+                 
Sbjct: 497 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ----------------- 539

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F+ ++      G ++ A +L   M  IG   N ++Y  L+DG C + R++++  
Sbjct: 540 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 599

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           + R+M   G KPT    + +   L + +    A  +  +M   G    +    +++  LC
Sbjct: 600 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 659

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           ++    EA   L  +       DI+ ++  I  +  + R   A ELF  I  +G  P++ 
Sbjct: 660 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 719

Query: 501 AYNIIISGLCKAQRVAEAEDLF 522
            Y+++I+ L K +   EA++LF
Sbjct: 720 TYSMMITNLIKEESYEEADNLF 741



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 23/385 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M D 
Sbjct: 408 LINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G V +
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 526

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  ++ 
Sbjct: 527 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +  T
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPT-SVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 645

Query: 274 LLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           +  ++   ++  L  N   D+A  LL+ +                F   V  +  +F+I+
Sbjct: 646 VSIHTYGVVLGGLCRNNCTDEANMLLEKL----------------FAMNVKFDIITFNIV 689

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ + K G+   A  LF  ++  G + N+  Y+ +I  L      EE+  L   +E+SG 
Sbjct: 690 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 749

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALN 415
                 LN + R L  + +V  A N
Sbjct: 750 ASDSRLLNHIVRMLLNKAEVAKASN 774



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 37/248 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG +EEA  L D +   G+  PN Y Y  L++  CK+  +D      ++M   G      
Sbjct: 556 VGNMEEAFALLDAMASIGI-EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 614

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
             + +L     + +   A  +F+E+I+ G  V  H + ++L    +    D+A  L+E++
Sbjct: 615 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT------------------------ 197
              N++ +  TF ++I    K  R  +A +LFD ++                        
Sbjct: 675 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 734

Query: 198 -----------KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
                      KSG ASD+ + + I+  L    ++  A    S +  + +T +   +S L
Sbjct: 735 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 794

Query: 247 ITSCSDEG 254
            +  S EG
Sbjct: 795 ASLFSREG 802


>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Brachypodium distachyon]
          Length = 926

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 168/737 (22%), Positives = 317/737 (43%), Gaps = 109/737 (14%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRLKEMQ 93
           FLI  L S G V++A  LFD +   GL  P    Y  L+   CK+  S++  EM    ++
Sbjct: 118 FLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRV-YKSLVFTYCKARRSLEADEMCCLMVK 176

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHG-WVDEHVFSILLVAFSKWGEV 151
           + G   D+   T L++  C  G+ + A+ VFN + ++ G  +D + ++ ++    + G V
Sbjct: 177 N-GMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYV 235

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D   EL + M D  +     T+ V++  + K   V  A++L++ M + G + D   Y ++
Sbjct: 236 DHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTML 295

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEI----------------------------- 242
           +  LCK  +L  A QL+++M   G+ PD  +                             
Sbjct: 296 MTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDC 355

Query: 243 ------LSKLITSCSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
                 LS L + CS+   + E   L+ E+    ++  +  + N ++  + S G +D +Y
Sbjct: 356 SGELLELSSLASGCSNMSLQQEAERLLDEMMRS-NLLPIDAILNMMIIAMCSEGRLDVSY 414

Query: 294 NLLQAMI-------------------KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
            LL  ++                   + + + D    + ++    V P+ S+  I++   
Sbjct: 415 YLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAY 474

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G ++ ALSLF EM + G   ++ +Y+++I  LC     +E+   LR+M E+G  P  
Sbjct: 475 CKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDE 534

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
               ++       +    A  +  +M  +G +P       LI  L K  K  +A  +L  
Sbjct: 535 VIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLER 594

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK--- 511
           M++EGF    V Y+  I          L L+L   +  +   PD++ Y  +++G+C+   
Sbjct: 595 MLEEGFATQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNID 654

Query: 512 ------------------------------------------AQRVAEAEDLFNEMITKG 529
                                                      +++  A+++  +++  G
Sbjct: 655 RRDMRPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESG 714

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           ++P +  YN ++NG C++  +D A   LS ++E+    P+ +TYT L++     G  + A
Sbjct: 715 MMPDLHIYNGMLNGLCRAQKMDDAYNLLS-LMEQSGVLPNHVTYTILMNNDIRLGDSNRA 773

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           I L+N +   G   + + +   I GL    R + AL  F MM+++G  P    +  ++  
Sbjct: 774 IQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQ 833

Query: 650 FLSELNPPLAFEVLKEM 666
            L+E +  LA  +  +M
Sbjct: 834 LLAENSTDLALNIFDDM 850



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 164/651 (25%), Positives = 285/651 (43%), Gaps = 40/651 (6%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS-YNCLLEALCKS 79
           +++SR   SP +   L+R + +  +  E   LF  V  EG   P   S +  L+  LC  
Sbjct: 69  LIESRYVPSPASSAALLRAMCAASMYSEVVDLF--VLWEGAPSPLPVSKFPFLIHGLCSK 126

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVF 138
            +VD        M   G          L+  YC + +  +A  +   ++ +G ++D  + 
Sbjct: 127 GAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLG 186

Query: 139 SILLVAFSKWGEVDKACELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           + L+    + G ++ A ++  RM  +   +L+   +  +I G  +   VD   +L+ +M 
Sbjct: 187 TALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMK 246

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             G       Y+V++   CKNK +  A++LY+ M   G++PD    + L+TS   EG+L 
Sbjct: 247 DRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLV 306

Query: 258 ----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
               L  K +  +R V    +L  SI R       +      L+A+ K     D   E+L
Sbjct: 307 EAEQLFTKML--ERGVFPDHVLFISIARFFPKGWEVVFVRKALKAVAK----LDCSGELL 360

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            +   +++   S+  +             A  L  EM +   +    + N +I  +C+  
Sbjct: 361 EL--SSLASGCSNMSLQQE----------AERLLDEMMRSNLLPIDAILNMMIIAMCSEG 408

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL+ SY LL ++   G++P+  T N + + LCR++ +  A  L+  M+ +G  P +  N+
Sbjct: 409 RLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNS 468

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +++   CK G    A     +M ++G  P I  Y + I  L  +     A    R +   
Sbjct: 469 IMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEA 528

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD V Y  +++G    +    A  +F+EM+ +GL P    Y  LING  K   I +A
Sbjct: 529 GLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKA 588

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L RMLE+   +  VI YT LI+     G     + L + M +    P+ IT+ AL+T
Sbjct: 589 LHYLERMLEEGFATQTVI-YTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVT 647

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           G+C            R +  + M+P +   +      L  L P ++F   K
Sbjct: 648 GIC------------RNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRK 686



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 37/570 (6%)

Query: 110 VYCNS--GQFDKALSVFNEIIDHGWVDEHVFSILLV----AFSKWGEVDKACELIERMDD 163
           V C+S  G    AL+ F+ +I+  +V     S  L+    A S + EV    +L    + 
Sbjct: 50  VACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEV---VDLFVLWEG 106

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
               L    F  LIHG   K  VDKA  LFD M   G A    +Y  ++   CK ++   
Sbjct: 107 APSPLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLE 166

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL----CNSI 279
           A ++   M  +G+  D  + + L+     EG L L + +++    VN    L      ++
Sbjct: 167 ADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAM-DVFNRMRVNEGAQLDAYAYTTM 225

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L  +G +D  + L Q M       D G+E          P   ++++++    K+  
Sbjct: 226 IGGLFEHGYVDHGWELYQEM------KDRGME----------PTPVTYNVMMWWYCKNKW 269

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A+ L+  M + G   ++  Y  L+  LC   +L E+ +L  +M E G  P H    S
Sbjct: 270 VGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFIS 329

Query: 400 MFRCLCRRQDVV---GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           + R   +  +VV    AL  V K+   G    +   + L           EA R L +M+
Sbjct: 330 IARFFPKGWEVVFVRKALKAVAKLDCSGE---LLELSSLASGCSNMSLQQEAERLLDEMM 386

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +   LP     +  I  +    R+D++  L   + A+G  P V+ YNI+I  LC+ +R+ 
Sbjct: 387 RSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMD 446

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +A  L N M ++G+ P ++T ++++  +CK G+I+ A+     M  K+   P +  Y ++
Sbjct: 447 DARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEM-AKDGLEPSIAVYDSI 505

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I  LC  G   +A     +M E G  P+ + +  L+ G       +AA   F  M E+G+
Sbjct: 506 IACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGL 565

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +P    + ALI+  + +     A   L+ M
Sbjct: 566 QPGSHAYGALINGLVKDNKIRKALHYLERM 595



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 241/543 (44%), Gaps = 16/543 (2%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++++S        L  +I  + S G ++ +  L D++   G   P+  +YN +++ L
Sbjct: 381 LLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGY-EPSVLTYNIVIKYL 439

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE- 135
           C+   +D     +  MQ  G   D  T + ++  YC  G  + ALS+F+E+   G     
Sbjct: 440 CRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSI 499

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
            V+  ++    + G   +A   + +M +  +  +E  +  L++G+        A ++FD+
Sbjct: 500 AVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDE 559

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M + G    +  Y  +I GL K+ ++  AL     M   G      I + LI     +GE
Sbjct: 560 MLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGE 619

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY--NLLQAMIKGEPIADVGVEML 313
                   W   D+  + ++ N +   L++ G++      N+ +  ++    A +     
Sbjct: 620 -------EWLGLDLVDL-MMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARY 671

Query: 314 MIFK--GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           M+F+    +S  T         +  + K+DLA ++ +++ + G M ++ +YN +++GLC 
Sbjct: 672 MLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCR 731

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVK 430
           + +++++Y LL  ME+SG  P H T   +     R  D   A+ L   +   GH    V 
Sbjct: 732 AQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVV 791

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           +NT  IK L    +  EA  F   M + GF+P    Y   +  L+     DLAL +F D+
Sbjct: 792 YNTF-IKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDM 850

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             HG  P    Y+ ++  L K  +  E + +F  M+ KG      T  LL     K G +
Sbjct: 851 FCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLLEELCYKQGEL 910

Query: 551 DQA 553
           D A
Sbjct: 911 DLA 913



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 213/498 (42%), Gaps = 50/498 (10%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C+ G+ D +  + ++++ +G+    + ++I++    +   +D A  LI  M    +R + 
Sbjct: 405 CSEGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDM 464

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T  +++  + K   ++ AL LFD+M K G     A+YD II  LC+    + A     +
Sbjct: 465 STNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQ 524

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGS 288
           M  +G+ PD  I + L+   S         +   E  +R +   +    +++  LV +  
Sbjct: 525 MIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNK 584

Query: 289 IDQAYNLLQAMI--------------------KGEPIADVGVEML-MIFKGTVSPNTSSF 327
           I +A + L+ M+                    KGE    +G++++ ++ K  V P+  ++
Sbjct: 585 IRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEW--LGLDLVDLMMKNHVEPDLITY 642

Query: 328 DIIINTLLKD-----------GKLDLA-LSLFREMTQI--GCMQNVFLYNNLIDGLCNSN 373
             ++  + ++            KLD A   LFR + QI  G  +           + +  
Sbjct: 643 GALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQISFGTRKG----KQKKKRMSSEE 698

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +++ +  +++++ ESG  P     N M   LCR Q +  A NL+  M   G  P     T
Sbjct: 699 KIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYT 758

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+    + G +  A +    +  +G + D V Y+  I GL   +R   AL  F  +   
Sbjct: 759 ILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKR 818

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI------NGWCKS 547
           G  P   AY+ I+  L        A ++F++M   G IP  + Y+ L+      N W + 
Sbjct: 819 GFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREV 878

Query: 548 GNIDQAMLCLSRMLEKES 565
             +   ML   R L+ E+
Sbjct: 879 DRVFMMMLEKGRSLDTET 896



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 39/301 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMR------LKEMQDYGWGYDKYTLTPLLQVYCNSGQ- 116
           P+  +Y  L+  +C++  +D  +MR      L E +     Y  + L P +      G+ 
Sbjct: 637 PDLITYGALVTGICRN--IDRRDMRPSLAAKLDEAR-----YMLFRLLPQISFGTRKGKQ 689

Query: 117 ----------FDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
                      D A ++  ++++ G + D H+++ +L    +  ++D A  L+  M+   
Sbjct: 690 KKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSG 749

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N  T+ +L++  ++    ++A+QLF+ +   G   D  +Y+  I GL   ++ + AL
Sbjct: 750 VLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEAL 809

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
             +  M+  G  P      K++     E   T L   I++D       + C+  +    S
Sbjct: 810 SFFLMMQKRGFVPSKAAYDKIMEQLLAENS-TDLALNIFDD-------MFCHGYIP-RYS 860

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           N S     +LL  + K     +V    +M+ +   S +T +  ++     K G+LDLA  
Sbjct: 861 NYS-----SLLLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLLEELCYKQGELDLAFE 915

Query: 346 L 346
           L
Sbjct: 916 L 916


>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 176/715 (24%), Positives = 302/715 (42%), Gaps = 85/715 (11%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS-CSVDLVEMRLKE 91
              LI  L S G V++A  LFD + R GL  P    Y  L  A CK+  S+D  +M  + 
Sbjct: 120 FALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRV-YRSLAFAYCKARRSLDASDM-CQL 177

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWG 149
           M   G   D+   T L++V+C  G+ + AL VF  +   +H  +D + ++ ++    + G
Sbjct: 178 MLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHG 237

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL------------QLFDKMT 197
            VD   ++   M D  I+ +  T+ V+I  + K   V  A+             LFDKM 
Sbjct: 238 RVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKML 297

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD---EG 254
           +SG   D  M+  I     K   +    +    +           LS L   CS+   + 
Sbjct: 298 ESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQK 357

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG--EP-------- 304
           E   L+ EI    +V  + ++ N ++  + S G +D +Y LL  ++    EP        
Sbjct: 358 EADHLLDEIVTS-NVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIV 416

Query: 305 ---------IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                    + D    + ++    V P+ S+  I++    K G+++ AL LF EM + G 
Sbjct: 417 IKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGI 476

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++ +Y+++I  LC   RL+E+   LR+M   G  P      S+       +       
Sbjct: 477 EPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCR 536

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  +M  +G +P       LI  L K  K  +A  +L  M++EG  P  V Y+  I    
Sbjct: 537 IFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFF 596

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK-----------AQRVAEAEDLFNE 524
               V L L+L   +      PD++ Y  +++G+C+           A+++ EA  +   
Sbjct: 597 RKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFR 656

Query: 525 MITK---------------------------------GLIPSVATYNLLINGWCKSGNID 551
           M+ +                                 G++P +  YN +ING C++  +D
Sbjct: 657 MLPQIIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMD 716

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
            A   LS M ++    P+ +TYT L++     G  + AI L+N +   GC  ++IT+   
Sbjct: 717 DAYSLLSVM-DQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTF 775

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GL    R + AL    MM ++G  P    +  L+   L+E    +  ++ ++M
Sbjct: 776 IKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDM 830



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 224/507 (44%), Gaps = 43/507 (8%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C+ G+ D +  +  +++ +G     + ++I++    +   +D A  LI  M    +R + 
Sbjct: 386 CSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDM 445

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T  +++  + K   ++ AL LF +M K G     A+YD II  LC+ ++L+ A     +
Sbjct: 446 STNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQ 505

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G+ PD  I + LI   S    LT         R    +  + + +++  +  G   
Sbjct: 506 MIREGLAPDEIIYTSLINGYS----LT---------RQTRNVCRIFDEMLKRGLQPGP-- 550

Query: 291 QAY-NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            AY +L+  ++KG  I      +  + +  ++P T  + ++IN   + G + L L L   
Sbjct: 551 HAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVL 610

Query: 350 MTQIGCMQNVFLYNNLIDGLC-NSNRLEESYELLREMEESGFKPTHFTLNSMFRCL---- 404
           M +     ++  Y  L+ G+C N  R      L ++++E+ +         +FR L    
Sbjct: 611 MMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYM--------LFRMLPQII 662

Query: 405 ------------CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                       C  + +  A  +++ +   G  P +     +I  LC+  K  +A+  L
Sbjct: 663 DTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLL 722

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
           + M Q G LP+ V Y+  +   I +  ++ A++LF  + + GC  D + YN  I GL  A
Sbjct: 723 SVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLA 782

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ EA      M  +G +PS A+Y+ L+        ID  +     ML  +  +P    
Sbjct: 783 GRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDML-FQGYTPRYAN 841

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           YT+L+  L   GR  +A  ++  M +K
Sbjct: 842 YTSLLLVLAKDGRWSEADRIFTMMLKK 868



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 170/414 (41%), Gaps = 86/414 (20%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-------------------------- 354
           +P+ +  D ++    + G +  ALS F  + Q G                          
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 355 ----CMQN-----VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
                M N     V  +  LI GLC+   ++++  L   M  SG  P      S+    C
Sbjct: 104 VLVLSMGNPSPLPVSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK---AMEAFRFLTDMVQEGFLP 462
           + +  + A ++ + M ++G     + +T LI+  C+ G+   A++ FR +     E    
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKG--DEHVQL 221

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ--------- 513
           D   Y+  I GL +  RVD  L+++ ++   G  PD   YN++I   CK++         
Sbjct: 222 DAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIY 281

Query: 514 ---RVAEAEDLFNEMITKGLIPS----VATYNLLINGW----------------CKSGNI 550
              ++ EAE+LF++M+  GL P     ++       GW                C +  +
Sbjct: 282 KDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWVVLFVRKALKAVAKLDCGAKLL 341

Query: 551 DQAML---CLSRMLEKESGS-----------PDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           + + L   C +  L+KE+             P  I    +I  +C  GR D +  L  ++
Sbjct: 342 ELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKL 401

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              GC P+ +T+  +I  LC+ +R   A     +M+ +G++PDM     +++A+
Sbjct: 402 VAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAY 455



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 1/171 (0%)

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD    + +++   +   ++ A   F+ ++  G  PS A+   L+   C +    +AM 
Sbjct: 44  APDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMD 103

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L   +   S  P V  +  LI GLC  G  D A  L++ M   G  P    + +L    
Sbjct: 104 VLVLSMGNPSPLP-VSDFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAY 162

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  R   A    ++M  KGM  D  +  ALI  F  E     A +V + M
Sbjct: 163 CKARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRM 213


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 251/585 (42%), Gaps = 103/585 (17%)

Query: 121 LSVFNEIIDHGWVDE-----HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           LS F E+  HG   +     HV   L  A ++W   D  C + E M    I  +  T+  
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDA-ARW---DDICAVHEEMLQLGIEPSIVTYNT 209

Query: 176 LIHGFVKKSRVDKALQLFDKMTK--SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
           L+  F+K+ R DK   L  +M    SG   +   Y+V+I GL +   LE A +L   M+ 
Sbjct: 210 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR- 268

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
                    LSK  +S                           N ++  L++ G + + Y
Sbjct: 269 ---------LSKKASS------------------------FTYNPLITGLLARGCVKKVY 295

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +L Q  ++ E I                P   +++ +I+ LL+ G ++ A   F EM  +
Sbjct: 296 DL-QLEMENEGIM---------------PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 339

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + +V  YN+L++G C +  L+E+  L  ++  +G  PT  T N      CR  D+  A
Sbjct: 340 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA 399

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIK---ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             L  +M  QG  P V   T+L+K    +C    A E   F  +M+ +G  PD   Y+  
Sbjct: 400 RILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMARE---FFDEMLSKGLQPDCFAYNTR 456

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL--------- 521
           I   + +  +  ALEL   +   G   D V YNI+I GLCK   + +A++L         
Sbjct: 457 ICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 516

Query: 522 --------------------------FNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
                                     FN MI+ GL+PS  T+ ++I+ +C+ GN+  A  
Sbjct: 517 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 576

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              +MLE E   P+ ITY  LI  LC  GR   A   ++EM E+G   N+ T+  LI G 
Sbjct: 577 WFRKMLE-EGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGN 635

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           CK      A+  +  M + G+ PD     AL+  F   ++  + +
Sbjct: 636 CKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFDGHVHHTIEY 680



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 211/484 (43%), Gaps = 28/484 (5%)

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           L  F +M   G A D    + ++  L    + +    ++ EM   GI P     + L+ S
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 250 CSDEG---ELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
              EG   ++ +L+KE+ E R    +   +  N ++  L   G +++A  L++ M     
Sbjct: 214 FLKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM----- 267

Query: 305 IADVGVEMLMIFKGTVSPNTSSF--DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                          +S   SSF  + +I  LL  G +     L  EM   G M  V  Y
Sbjct: 268 --------------RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 313

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N +I GL  S  +E +     EM   G  P   T NS+    C+  ++  AL L   +R 
Sbjct: 314 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 373

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P V    + I   C+ G   EA     +M ++G LP++  Y+  + G +++  + +
Sbjct: 374 AGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAM 433

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A E F ++ + G  PD  AYN  I        +A A +L   ++ +G+     TYN+LI+
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G CK+GN+  A     +M+      PD ITYT LI   C  G   +A  ++N M   G  
Sbjct: 494 GLCKTGNLKDAKELQMKMVSN-GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 552

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +TF  +I   C+     +A   FR M E+G++P+   +  LI A        LA   
Sbjct: 553 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHH 612

Query: 663 LKEM 666
             EM
Sbjct: 613 FHEM 616



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 226/538 (42%), Gaps = 34/538 (6%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           F ++   G+  P+    N +L AL  +   D +    +EM   G      T   LL  + 
Sbjct: 157 FREMASHGV-APDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFL 215

Query: 113 NSGQFDKALSVFNEIIDHG---WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
             G+ DK   +  E+   G     ++  +++++   ++ G++++A EL+E M     RL+
Sbjct: 216 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-----RLS 270

Query: 170 EK----TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +K    T+  LI G + +  V K   L  +M   G       Y+ +I GL ++  +E A 
Sbjct: 271 KKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 330

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
             ++EM+  G+ PD    + L+      G L   +    + R              +L  
Sbjct: 331 VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT-------VLTY 383

Query: 286 NGSID---QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           N  ID   +  +L +A I  E + + G            PN  ++ I++   L    L +
Sbjct: 384 NIRIDGYCRLGDLEEARILKEEMGEQGC----------LPNVCTYTILMKGSLNVCSLAM 433

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A   F EM   G   + F YN  I        +  + EL   +   G      T N +  
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+  ++  A  L  KM   G +P     T LI   C+ G   EA +   +M+ +G LP
Sbjct: 494 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 553

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
             V ++  I        +  A   FR +   G  P+ + YN++I  LC+  R   A   F
Sbjct: 554 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 613

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +EM+ +GL+ +  TY LLI+G CK GN + AM     M  +    PD +T+  L+ G 
Sbjct: 614 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM-HQNGIHPDYLTHKALVKGF 670



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 209/476 (43%), Gaps = 33/476 (6%)

Query: 44  GLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSC----SVDLVE-MRLKEMQDYGW 97
           G  ++  ML  +++  G  C+PN+ +YN ++  L +      + +LVE MRL + +   +
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSF 276

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACEL 157
            Y+   +T LL   C    +D  L + NE I    V    ++ ++    + G V+ A   
Sbjct: 277 TYNPL-ITGLLARGCVKKVYDLQLEMENEGIMPTVV---TYNAMIHGLLQSGLVEAAQVK 332

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              M    +  +  T+  L++G+ K   + +AL LF  + ++G A     Y++ I G C+
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
              LE A  L  EM   G  P+    + L+    +   L  + +E +++           
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLA-MAREFFDE----------- 440

Query: 278 SIMRILVSNGSIDQ--AYN--LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                ++S G      AYN  +   +I G+    + +  +++ +G +S +T +++I+I+ 
Sbjct: 441 -----MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEG-ISSDTVTYNILIHG 494

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G L  A  L  +M   G   +   Y  LI   C    L E+ ++   M   G  P+
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T   +    CRR ++  A    RKM  +G EP      +LI  LC+ G+   A     
Sbjct: 555 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 614

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           +M++ G + +   Y+  I G   +   + A+  + ++  +G  PD + +  ++ G 
Sbjct: 615 EMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 176/444 (39%), Gaps = 59/444 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L + G V++   L  +++ EG+ +P   +YN ++  L +S  V+  +++  EM+  
Sbjct: 281 LITGLLARGCVKKVYDLQLEMENEGI-MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 339

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   LL  YC +G   +AL +F ++   G     + ++I +  + + G++++A
Sbjct: 340 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA 399

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L E M +     N  T+ +L+ G +    +  A + FD+M   G   D   Y+  I  
Sbjct: 400 RILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICA 459

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVN 270
                 +  AL+L   +   GI+ D    + LI      G L     L +K +      +
Sbjct: 460 ELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
            +T  C  ++      G + +A  +   MI                   + P+  +F +I
Sbjct: 520 CITYTC--LIHAHCERGLLREARKIFNNMISD----------------GLLPSAVTFTVI 561

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   + G L  A   FR+M + G   N   YN LI  LC   R + +     EM E G 
Sbjct: 562 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGL 621

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
               +T                                    TLLI   CK G   +A R
Sbjct: 622 VANKYTY-----------------------------------TLLIDGNCKVGNWEDAMR 646

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGL 474
           F  +M Q G  PD + + A + G 
Sbjct: 647 FYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 35/204 (17%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           L L  FR++ +HG  PDV   N ++  L  A R  +   +  EM+  G+ PS+ TYN L+
Sbjct: 152 LCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLL 211

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIML-------- 592
           + + K G  D+  + L  M  + SG  P+ +TY  +I GL   G  ++A  L        
Sbjct: 212 DSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK 271

Query: 593 ------WN--------------------EMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
                 +N                    EME +G  P  +T+ A+I GL +     AA V
Sbjct: 272 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F  M+  G+ PD+  + +L++ +
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGY 355


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 66/614 (10%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA-CELIER 160
           +T   L+  Y    + D  L++   ++ +G   +     L+  F K GEVDKA C  +E 
Sbjct: 15  HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEM 74

Query: 161 MDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           M+     L +   C  +I    K   +DKA  +  KM  SG A D   Y +II GLCK+K
Sbjct: 75  MEQG--VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CN 277
            ++ A ++  +M  +G  P+    + LI   S  G     V+   +      +  +  CN
Sbjct: 133 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 192

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------------GVEMLMI 315
           S +  L  +G  ++A  +  +M+   P  D+                       +  LM+
Sbjct: 193 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG ++PN   F+I+IN   + G +D A+ +F +M   G + +   +  +I  LC   RL
Sbjct: 253 TKG-IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 311

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTL 434
           +++      M + G  P+      + +  C   ++V A  L+ +M  +    P VK+ + 
Sbjct: 312 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 371

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS----------------------AAIG 472
           +I  LCK G+  E    +  MVQ G  P++V ++                      A+IG
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431

Query: 473 -------------GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                        G     R+D AL +FRD+   G  P  V Y+II+ GL +A+R   A+
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 491

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F+EMI  G   S+ TY +++ G C++   D+A + L ++        D+IT+  +I  
Sbjct: 492 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV-KFDIITFNIVISA 550

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   GR  +A  L++ +   G  PN  T+  +IT L K +    A   F  +++ G   D
Sbjct: 551 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 610

Query: 640 MFVFVALISAFLSE 653
             +   ++   L++
Sbjct: 611 SRLLNHIVRMLLNK 624



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 241/535 (45%), Gaps = 26/535 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A+ LF ++  +G+ +P     N +++ LCK   +D  E  +++M D G   D +T
Sbjct: 62  GEVDKAHCLFLEMMEQGV-LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 120

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C S   DKA  V  ++++ G     + ++ L+  +S  G  +++  + ++M 
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-- 220
            C +          IH   K  R ++A  +FD M   G   D   Y  ++ G        
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L     +++ M   GI P+  + + LI + +  G +   +L+ E  +++ +   T+   +
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300

Query: 279 IMRILVSNGSIDQAYNLLQAMI--------------------KGEPIADVGVEMLMIFKG 318
           ++  L   G +D A +    M+                     GE +    +   M+ K 
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P    F  IIN L K+G++     +   M Q G   NV  +N+L++G C    +EE+
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + LL  M   G +P  +   ++    C+   +  AL + R M  +G +P     ++++  
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L +  +   A +   +M++ G    I  Y   +GGL      D A  L   + A     D
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           ++ +NI+IS + K  R  EA++LF+ + T GL+P++ TY+++I    K  + ++A
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 595



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 64/503 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ +LI  + +  R D  L +  ++ K+G   D   Y +I G   K+ +++ A  L+ EM
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCLFLEM 74

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G+ P                                   L+CNSI++ L     +D+
Sbjct: 75  MEQGVLPKI---------------------------------LICNSIIKELCKMKEMDK 101

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A +++Q M+      D G+          +P+  ++ +II+ L K   +D A  +  +M 
Sbjct: 102 AESIVQKMV------DSGI----------APDLFTYSLIIDGLCKSKAMDKAERVLEQMV 145

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + G   N   YN+LI G   S    ES  + ++M   G  PT    NS    L +     
Sbjct: 146 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 205

Query: 412 GALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTD-------MVQEGFLPD 463
            A  +   M ++G +P  + ++T+L      HG A      L D       M+ +G  P+
Sbjct: 206 EAKCIFDSMVLKGPKPDIISYSTML------HGYATATDSCLADVHNIFNLMLTKGIAPN 259

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              ++  I        +D A+ +F D+   G  PD V +  +IS LC+  R+ +A   FN
Sbjct: 260 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 319

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+  G+ PS A Y  LI G C  G + +A   +S M+ K+   P V  ++++I+ LC  
Sbjct: 320 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 379

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR  +   + + M + G  PN +TF +L+ G C       A      M   G++P+ +++
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 439

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             L+  +        A  V ++M
Sbjct: 440 GTLVDGYCKNGRIDDALTVFRDM 462



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/500 (22%), Positives = 217/500 (43%), Gaps = 57/500 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++Y+ +++ LCKS ++D  E  L++M + G   +  T   L+  Y  SG +++++ V
Sbjct: 116 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 175

Query: 124 FNE-------------------IIDHGWVDEH--VFSILLVAFSK------------WGE 150
           F +                   +  HG  +E   +F  +++   K            +  
Sbjct: 176 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 235

Query: 151 VDKAC-----ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
              +C      +   M    I  N+  F +LI+ + +   +DKA+ +F+ M   G   D 
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 295

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +  +I  LC+  +L+ AL  ++ M   G+ P   +   LI  C + GEL    + I E
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355

Query: 266 --DRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             ++D+    +   +SI+  L   G + +  +++  M++                    P
Sbjct: 356 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ----------------RP 399

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  +F+ ++      G ++ A +L   M  IG   N ++Y  L+DG C + R++++  + 
Sbjct: 400 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 459

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           R+M   G KPT    + +   L + +    A  +  +M   G    +    +++  LC++
Sbjct: 460 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 519

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               EA   L  +       DI+ ++  I  +  + R   A ELF  I  +G  P++  Y
Sbjct: 520 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 579

Query: 503 NIIISGLCKAQRVAEAEDLF 522
           +++I+ L K +   EA++LF
Sbjct: 580 SMMITNLIKEESYEEADNLF 599



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 186/425 (43%), Gaps = 23/425 (5%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
              LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M
Sbjct: 263 FNILINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHM 321

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGE 150
            D G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G 
Sbjct: 322 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 381

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +  ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  
Sbjct: 382 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 441

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +
Sbjct: 442 LVDGYCKNGRIDDALTVFRDMLHKGVKPT-SVLYSIILHGLFQARRTTAAKKMFHEMIES 500

Query: 271 TMTLLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
             T+  ++   ++  L  N   D+A  LL+ +                F   V  +  +F
Sbjct: 501 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL----------------FAMNVKFDIITF 544

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I+ + K G+   A  LF  ++  G + N+  Y+ +I  L      EE+  L   +E+
Sbjct: 545 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEK 604

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           SG       LN + R L  + +V  A N +  +            +LL     + GK  E
Sbjct: 605 SGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 664

Query: 448 AFRFL 452
             + L
Sbjct: 665 HIKLL 669



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 488 RDICAHGCCPDVVAYNIIIS----------------------------------GLCKAQ 513
           R  C     P +  YNI+I                                   G  K  
Sbjct: 3   RWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDG 62

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVIT 572
            V +A  LF EM+ +G++P +   N +I   CK   +D+A   + +M+  +SG +PD+ T
Sbjct: 63  EVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV--DSGIAPDLFT 120

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y+ +IDGLC +   D A  +  +M E G  PN IT+ +LI G         ++  F+ M 
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180

Query: 633 EKGMKP 638
             G+ P
Sbjct: 181 SCGVIP 186



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P++ TYN+LI+ + +    D  +  + R+L+   G PD  +Y +LI G    G  D A  
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-PDDFSY-SLIYGFVKDGEVDKAHC 69

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+ EM E+G  P  +   ++I  LCK      A    + M + G+ PD+F +  +I    
Sbjct: 70  LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129

Query: 652 SELNPPLAFEVLKEM 666
                  A  VL++M
Sbjct: 130 KSKAMDKAERVLEQM 144


>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g57250, mitochondrial; Flags: Precursor
 gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 971

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 305/681 (44%), Gaps = 65/681 (9%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +G  E A   F+     G+ VPN  +Y  L+ ALC+   VD V   ++ ++D G+ +D  
Sbjct: 184 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 243

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
             +  +  Y   G    AL    E+++ G   + V +SIL+   SK G V++A  L+ +M
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  N  T+  +I G  K  ++++A  LF+++   G   D  +Y  +I G+C+   L
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNSI 279
             A  +  +M+  GI P     + +I      G ++    E+ +    DV T + L +S 
Sbjct: 364 NRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS-EADEVSKGVVGDVITYSTLLDSY 422

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM--------------IFKGT----VS 321
           +++   +  ++     L+A I   P+  V   +L+              +++      ++
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKI---PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+T+++  +I    K G+++ AL +F E+ +   +     YN +ID LC    L+ + E+
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTATEV 538

Query: 382 LREMEESG-FKPTHFT----------------------------------LNSMFRCLCR 406
           L E+ E G +   H +                                  LN     LC+
Sbjct: 539 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCK 598

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP-DIV 465
           R     A+ +   MR +G    V   + ++K L  + ++++A+  + +  +      D++
Sbjct: 599 RGSFEAAIEVYMIMRRKG--LTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 656

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I GL     +  AL L     + G   + + YN +I+GLC+   + EA  LF+ +
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              GL+PS  TY +LI+  CK G    A   L  M+ K    P++I Y +++DG C  G+
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNIIIYNSIVDGYCKLGQ 775

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            +DA+ + +        P+  T  ++I G CK      AL  F   K+K +  D F F+ 
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  F ++     A  +L+EM
Sbjct: 836 LIKGFCTKGRMEEARGLLREM 856



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 216/488 (44%), Gaps = 28/488 (5%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD-KMTKSGFASDAAMYDVIIGG 214
           +   ++D   I +N + + ++   F+  +R + A +  +  ++K+       M D +I G
Sbjct: 47  QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 106

Query: 215 --LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVN 270
             + ++   +  L L   ++  G  P       LI    ++GE+   + V E+  +++VN
Sbjct: 107 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166

Query: 271 TM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                 +C++++      G  + A    ++ +                 G + PN  ++ 
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVD---------------SGVLVPNLVTYT 211

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +++ L + GK+D    L R +   G   +   Y+N I G      L ++    REM E 
Sbjct: 212 TLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEK 271

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G      + + +   L +  +V  AL L+ KM  +G EP +   T +I+ LCK GK  EA
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F     ++  G   D   Y   I G+     ++ A  +  D+   G  P ++ YN +I+G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC A RV+EA++     ++KG++  V TY+ L++ + K  NID  +    R LE +    
Sbjct: 392 LCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI-PM 445

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D++    L+    + G   +A  L+  M E    P+  T+  +I G CK  +   AL  F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505

Query: 629 RMMKEKGM 636
             +++  +
Sbjct: 506 NELRKSSV 513



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 212/476 (44%), Gaps = 32/476 (6%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R    L     + KSGF+      D  +  L + ++    LQ YS++    I  +  I S
Sbjct: 6   RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
             I S +       L    +ED +           + I +S  SI    ++L ++I G  
Sbjct: 66  --IVSWA------FLNLNRYEDAE---------KFINIHISKASIFPRTHMLDSLIHGFS 108

Query: 305 IA-DVGVEMLMIFKGTVS-----PNTSSFDIIINTLLKDGKLDLALSLFREMT--QIGCM 356
           I  D   + L+I +  +      P++ +F  +I   ++ G++D A+ +   MT   +   
Sbjct: 109 ITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYP 168

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDVVGALN 415
            + F+ + +I G C   + E +        +SG   P   T  ++   LC+   V    +
Sbjct: 169 FDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           LVR++  +G E      +  I    K G  ++A     +MV++G   D+V YS  I GL 
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 288

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               V+ AL L   +   G  P+++ Y  II GLCK  ++ EA  LFN +++ G+     
Sbjct: 289 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            Y  LI+G C+ GN+++A   L  M E+    P ++TY T+I+GLC+AGR  +A     +
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCMAGRVSEA-----D 402

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
              KG   + IT+  L+    K     A L   R   E  +  D+ +   L+ AFL
Sbjct: 403 EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 458


>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
          Length = 1012

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 305/681 (44%), Gaps = 65/681 (9%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +G  E A   F+     G+ VPN  +Y  L+ ALC+   VD V   ++ ++D G+ +D  
Sbjct: 225 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 284

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
             +  +  Y   G    AL    E+++ G   + V +SIL+   SK G V++A  L+ +M
Sbjct: 285 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 344

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               +  N  T+  +I G  K  ++++A  LF+++   G   D  +Y  +I G+C+   L
Sbjct: 345 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 404

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNSI 279
             A  +  +M+  GI P     + +I      G ++    E+ +    DV T + L +S 
Sbjct: 405 NRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS-EADEVSKGVVGDVITYSTLLDSY 463

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM--------------IFKGT----VS 321
           +++   +  ++     L+A I   P+  V   +L+              +++      ++
Sbjct: 464 IKVQNIDAVLEIRRRFLEAKI---PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 520

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+T+++  +I    K G+++ AL +F E+ +   +     YN +ID LC    L+ + E+
Sbjct: 521 PDTATYATMIKGYCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTATEV 579

Query: 382 LREMEESG-FKPTHFT----------------------------------LNSMFRCLCR 406
           L E+ E G +   H +                                  LN     LC+
Sbjct: 580 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCK 639

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP-DIV 465
           R     A+ +   MR +G    V   + ++K L  + ++++A+  + +  +      D++
Sbjct: 640 RGSFEAAIEVYMIMRRKGLT--VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 697

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  I GL     +  AL L     + G   + + YN +I+GLC+   + EA  LF+ +
Sbjct: 698 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 757

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              GL+PS  TY +LI+  CK G    A   L  M+ K    P++I Y +++DG C  G+
Sbjct: 758 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNIIIYNSIVDGYCKLGQ 816

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            +DA+ + +        P+  T  ++I G CK      AL  F   K+K +  D F F+ 
Sbjct: 817 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 876

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  F ++     A  +L+EM
Sbjct: 877 LIKGFCTKGRMEEARGLLREM 897



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 216/488 (44%), Gaps = 28/488 (5%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD-KMTKSGFASDAAMYDVIIGG 214
           +   ++D   I +N + + ++   F+  +R + A +  +  ++K+       M D +I G
Sbjct: 88  QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 147

Query: 215 --LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVN 270
             + ++   +  L L   ++  G  P       LI    ++GE+   + V E+  +++VN
Sbjct: 148 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 207

Query: 271 TM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                 +C++++      G  + A    ++ +                 G + PN  ++ 
Sbjct: 208 YPFDNFVCSAVISGFCKIGKPELALGFFESAVD---------------SGVLVPNLVTYT 252

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +++ L + GK+D    L R +   G   +   Y+N I G      L ++    REM E 
Sbjct: 253 TLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEK 312

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G      + + +   L +  +V  AL L+ KM  +G EP +   T +I+ LCK GK  EA
Sbjct: 313 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 372

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F     ++  G   D   Y   I G+     ++ A  +  D+   G  P ++ YN +I+G
Sbjct: 373 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 432

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC A RV+EA++     ++KG++  V TY+ L++ + K  NID  +    R LE +    
Sbjct: 433 LCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI-PM 486

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D++    L+    + G   +A  L+  M E    P+  T+  +I G CK  +   AL  F
Sbjct: 487 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 546

Query: 629 RMMKEKGM 636
             +++  +
Sbjct: 547 NELRKSSV 554



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 212/476 (44%), Gaps = 32/476 (6%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R    L     + KSGF+      D  +  L + ++    LQ YS++    I  +  I S
Sbjct: 47  RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 106

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
             I S +       L    +ED +           + I +S  SI    ++L ++I G  
Sbjct: 107 --IVSWA------FLNLNRYEDAE---------KFINIHISKASIFPRTHMLDSLIHGFS 149

Query: 305 IA-DVGVEMLMIFKGTVS-----PNTSSFDIIINTLLKDGKLDLALSLFREMT--QIGCM 356
           I  D   + L+I +  +      P++ +F  +I   ++ G++D A+ +   MT   +   
Sbjct: 150 ITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYP 209

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDVVGALN 415
            + F+ + +I G C   + E +        +SG   P   T  ++   LC+   V    +
Sbjct: 210 FDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 269

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           LVR++  +G E      +  I    K G  ++A     +MV++G   D+V YS  I GL 
Sbjct: 270 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 329

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               V+ AL L   +   G  P+++ Y  II GLCK  ++ EA  LFN +++ G+     
Sbjct: 330 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 389

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            Y  LI+G C+ GN+++A   L  M E+    P ++TY T+I+GLC+AGR  +A     +
Sbjct: 390 LYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCMAGRVSEA-----D 443

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
              KG   + IT+  L+    K     A L   R   E  +  D+ +   L+ AFL
Sbjct: 444 EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 499


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 237/535 (44%), Gaps = 23/535 (4%)

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           LS F+E+  HG   D    + +L   S     D  C +   M    I  +  T+  L+  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 180 FVKKSRVDKALQLFDKMTK--SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           F+K+ R DK   L  +M    SG   +   ++V+I GL +   LE A ++   M+ S   
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LL 296
             F   + LIT         LL K   +  D   + +    IM  +V+       YN ++
Sbjct: 307 SSF-TYNPLITG--------LLAKGFVKKADDLQLEMENEGIMPTVVT-------YNAMI 350

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             +++   +    V+ + +    + P+  +++ ++N   K G L  AL LF ++   G  
Sbjct: 351 HGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLA 410

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
             V  YN LIDG C    LEE+  L  EM E G  P   T   + +       +  A   
Sbjct: 411 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREF 470

Query: 417 VRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
             +M  +G +P    +NT +  EL   G   +AFR    M+ EG   D V Y+  I GL 
Sbjct: 471 FDEMLSKGLQPDCFAYNTRIRAELTL-GAIAKAFRLREVMMLEGISSDTVTYNILIDGLC 529

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               ++ A +L   +  +G  PD + Y  +I   C+   + EA   F +MI+ GL PS  
Sbjct: 530 KTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAV 589

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY + I+ +C+ GN+  A     +MLE E   P+ ITY  LI  LC  GR   A   ++E
Sbjct: 590 TYTVFIHAYCRRGNLYSAYGWFRKMLE-EGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           M E+G  PN+ T+  LI G CK      A+  +  M + G+ PD     AL   F
Sbjct: 649 MLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 208/499 (41%), Gaps = 29/499 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFDKAL 121
           P+  +YN LL++  K    D V M LKEM+  G G   +  T   ++      G  ++A 
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            +   +          ++ L+      G V KA +L   M++  I     T+  +IHG +
Sbjct: 295 EMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
           +  +V+ A   F +M   G   D   Y+ ++ G CK   L+ AL L+ +++ +G+ P   
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414

Query: 240 -FEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            + IL        D  E   L +E+ E     DV T T+L    M+   +  S+  A   
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL----MKGSHNACSLAMAREF 470

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              M+                KG + P+  +++  I   L  G +  A  L   M   G 
Sbjct: 471 FDEMLS---------------KG-LQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +   YN LIDGLC +  L ++ +L  +M  +G +P   T   +    C R  +  A  
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
             + M   G  P     T+ I   C+ G    A+ +   M++EG  P+ + Y+  I  L 
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R  LA   F ++   G  P+   Y ++I G CK     +A   + EM   G+ P   
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYL 694

Query: 536 TYNLLINGWCKSGNIDQAM 554
           T+  L  G+   G+++ A+
Sbjct: 695 THKALFKGF-DEGHMNHAI 712



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 35/204 (17%)

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           L L  F ++ +HG  PDV   N ++  L  A R  +   +  EM+  G+ PS+ TYN L+
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIML-------- 592
           + + K G  D+  + L  M  + SG  P+ +T+  +I GL   G  ++A  +        
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 593 ------WN--------------------EMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
                 +N                    EME +G  P  +T+ A+I GL +  +  AA V
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F  M+  G++PD+  + +L++ +
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGY 388


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 251/572 (43%), Gaps = 52/572 (9%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSK-WGEVDKA 154
           WG          QV   +G   +A  +F++++++G  V     ++ L   S  +  +  A
Sbjct: 177 WGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTA 236

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +     +  +  N  ++ +++H   +  +V +A  L  +M   G   D   Y VI+ G
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C+ +QL   L+L  E++  G+ P                               N  T 
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKP-------------------------------NQYTY 325

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+  L   G + +A  +L+ M K + I                P+   +  +I+  
Sbjct: 326 --NSIISFLCKTGRVVEAEQVLRVM-KNQRIF---------------PDNVVYTTLISGF 367

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G + +   LF EM +   + +   Y ++I GLC + ++ E+ +L  EM   G KP  
Sbjct: 368 GKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  ++    C+  ++  A +L  +M  +G  P V   T L+  LCK G+   A   L +
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M ++G  P++  Y+A I GL  +  ++ A++L  ++   G  PD + Y  I+   CK   
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +A+A +L   M+ KGL P++ T+N+L+NG+C SG ++     +  ML+K    P+  T+ 
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK-GIMPNATTFN 606

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           +L+   CI       I ++  M  +G  P+  T+  LI G CK    + A    + M EK
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G       + +LI  F        A ++ +EM
Sbjct: 667 GFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 238/527 (45%), Gaps = 51/527 (9%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FL R   S   +  A  +F +    G+C  N  SYN +L  LC+   V      L +M+ 
Sbjct: 222 FLARLSNSFDGIRTAFRVFREYSEVGVCW-NTVSYNIILHLLCQLGKVKEAHSLLIQMEF 280

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
            G   D  + + ++  YC   Q  K L +  E+   G   +++ ++ ++    K G V +
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVE 340

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +++  M +  I  +   +  LI GF K   V    +LFD+M +     D   Y  +I 
Sbjct: 341 AEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC+  ++  A +L+SEM   G+ PD    + LI      GE+                 
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM----------------- 443

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                            +A++L   M++               KG ++PN  ++  +++ 
Sbjct: 444 ----------------KEAFSLHNQMVE---------------KG-LTPNVVTYTALVDG 471

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G++D+A  L  EM++ G   NV  YN LI+GLC    +E++ +L+ EM+ +GF P 
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T  ++    C+  ++  A  L+R M  +G +P +    +L+   C  G   +  R + 
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M+ +G +P+   +++ +        +   +E+++ + A G  PD   YNI+I G CKA+
Sbjct: 592 WMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            + EA  L  EM+ KG   + A+YN LI G+ K    ++A      M
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 249/573 (43%), Gaps = 53/573 (9%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           P       + L   GL+ EA  LFD++   G+ V  + S N  L  L  S        R+
Sbjct: 181 PLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVD-SCNLFLARLSNSFDGIRTAFRV 239

Query: 90  -KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            +E  + G  ++  +   +L + C  G+  +A S+  ++   G V + V +S+++  + +
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             ++ K  +L+E +    ++ N+ T+  +I    K  RV +A Q+   M       D  +
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  +I G  K+  + +  +L+ EMK   I PDF   + +I                    
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHG------------------ 401

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                  LC +        G + +A  L   M+                KG + P+  ++
Sbjct: 402 -------LCQA--------GKVVEARKLFSEMLS---------------KG-LKPDEVTY 430

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+   K G++  A SL  +M + G   NV  Y  L+DGLC    ++ + ELL EM E
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G +P   T N++   LC+  ++  A+ L+ +M + G  P     T ++   CK G+  +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L  M+ +G  P IV ++  + G      ++    L + +   G  P+   +N ++ 
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
             C    +    +++  M  +G++P   TYN+LI G CK+ N+ +A      M+EK   S
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK-GFS 669

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
               +Y +LI G     + ++A  L+ EM   G
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 181/423 (42%), Gaps = 51/423 (12%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L +  R+     + + +   R F        LI   G  G V     LFD++KR+ + 
Sbjct: 330 SFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI- 388

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  +Y  ++  LC++  V        EM   G   D+ T T L+  YC +G+  +A S
Sbjct: 389 VPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFS 448

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + N++++ G     V ++ L+    K GEVD A EL+  M +  ++ N  T+  LI+G  
Sbjct: 449 LHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLC 508

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   +++A++L ++M  +GF  D   Y  I+   CK  ++  A +L   M   G+ P   
Sbjct: 509 KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTI- 567

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                           +  N +M     +G ++    L++ M+ 
Sbjct: 568 --------------------------------VTFNVLMNGFCMSGMLEDGERLIKWML- 594

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                D G          + PN ++F+ ++        +   + +++ M   G + +   
Sbjct: 595 -----DKG----------IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNT 639

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI G C +  ++E++ L +EM E GF  T  + NS+ +   +R+    A  L  +MR
Sbjct: 640 YNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR 699

Query: 422 VQG 424
             G
Sbjct: 700 THG 702


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 237/517 (45%), Gaps = 22/517 (4%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           H+ + L  A  ++G+  KA ++++RM +  ++ + + +   I       + ++A++L   
Sbjct: 153 HLKATLREA-KQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLAS 211

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   D   Y   I    K  + + A+ L   MKG G+ P+  + S  I++C   G+
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQ 271

Query: 256 LTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
               V  + E   V      +  ++++      G  + A+ LL               M 
Sbjct: 272 WETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLL---------------ME 316

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M  KG V+ N  ++ I+I    K G+ + A++L REM + G   +V  Y++ I       
Sbjct: 317 MPTKGVVA-NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKG 375

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           + EE+  LLREM   G  P   +   +     +R     A++L+++M+  G  P V + +
Sbjct: 376 QWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYS 435

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             I    +  +  +A   L +M   G  P+++ Y++AI       R  +A+EL R++ AH
Sbjct: 436 AAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAH 495

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PDV+ Y+ +I+     ++  EA DLF EM  +G+ P V + N  IN   + G  ++A
Sbjct: 496 GLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L  M       PD I+Y T ID      R  + I L  EM   G  P+ I++   ++
Sbjct: 556 LDVLGEM-PTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614

Query: 614 GLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISA 649
             C  D   + ALV  R M   G+ PD+  + + I+A
Sbjct: 615 A-CSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINA 650



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 240/565 (42%), Gaps = 22/565 (3%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
           L  MQ+ G   D    +  +    N+ Q+++A+ +   +   G   D   +S  + A +K
Sbjct: 174 LDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAK 233

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                +A  L+  M    ++ N   +   I    K  + + A+ L  +M   G A D   
Sbjct: 234 VSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVIT 293

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIW 264
           Y  +I    K  Q E A +L  EM   G+  +    S +I +C+  G   E   L++E+ 
Sbjct: 294 YSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQ 353

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           E+  V    +  +S +      G  ++A  LL+             EM M     V+PN 
Sbjct: 354 EN-GVAPDVITYSSTISACAKKGQWEEAVGLLR-------------EMPME---GVTPNA 396

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+ I+I+   K G+   A+ L +EM   G   +V  Y+  ID    ++R E++  LLRE
Sbjct: 397 ISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLRE 456

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M  +G  P   + NS      +      A+ L+R+M   G  P V   + +I       +
Sbjct: 457 MPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQ 516

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA     +M ++G  PD+V  + AI         + AL++  ++   G  PD ++Y  
Sbjct: 517 WEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRT 576

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
            I    K  R  E  DL  EM T GL P   +Y   ++     G   +A++ L  ML   
Sbjct: 577 AIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG 636

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             SPDV+TY + I+     GR  +A +L  +M   G AP+  +F A I      D+   A
Sbjct: 637 L-SPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTA 695

Query: 625 LVHFRMMKEKGMKPDMFVFVALISA 649
           +     M+  G+ P+   ++  + A
Sbjct: 696 VEVLFEMRALGVSPNEATYLTAMYA 720



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 247/579 (42%), Gaps = 39/579 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           + D+++ +G+  P++ +Y+  + A   +   +     L  M   G   D  T +  +   
Sbjct: 173 VLDRMQEQGV-KPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAAC 231

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
               ++ +A+ +   +   G V  +V  +S  + A  K G+ + A +L++ M    +  +
Sbjct: 232 AKVSRWKEAVGLLRSMKGQG-VKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPD 290

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             T+  +I    K+ + + A +L  +M   G  ++   Y ++IG   K  Q E A+ L  
Sbjct: 291 VITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLR 350

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLCNSIMRILV 284
           EM+ +G+ PD    S  I++C+ +G+        WE+     R++    +  N+I   +V
Sbjct: 351 EMQENGVAPDVITYSSTISACAKKGQ--------WEEAVGLLREMPMEGVTPNAISYGIV 402

Query: 285 -----SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                  G   +A +LLQ M                    V P+  ++   I+   +  +
Sbjct: 403 ISACAKRGRWREAIDLLQEM----------------QAHGVPPDVINYSAAIDACAQASR 446

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            + AL L REM   G   NV  YN+ ID    + R + + ELLREM   G  P   T ++
Sbjct: 447 WEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSA 506

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +       +    AL+L R+M+ QG  P V      I    + G   EA   L +M   G
Sbjct: 507 VIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMG 566

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +PD + Y  AI       R    ++L R++   G  PD ++Y   +S         EA 
Sbjct: 567 LVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEAL 626

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L  +M+  GL P V TYN  IN   K G   +A + L R +     +PDV ++   ID 
Sbjct: 627 VLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLL-RQMPTFGLAPDVNSFNAAIDA 685

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
                +   A+ +  EM   G +PN  T++  +    +C
Sbjct: 686 CGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRC 724



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 211/494 (42%), Gaps = 20/494 (4%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           +EA  L   +K +G+  PN   Y+  + A  K    +     LKEM   G   D  T + 
Sbjct: 238 KEAVGLLRSMKGQGV-KPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYST 296

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++      GQ++ A  +  E+   G V   + +SI++ A +KWG+ ++A  L+  M +  
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  +  T+   I    KK + ++A+ L  +M   G   +A  Y ++I    K  +   A+
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  EM+  G+ PD    S  I +C+   + +   + +W  R++    L  N    ++  
Sbjct: 417 DLLQEMQAHGVPPDVINYSAAIDACA---QASRWEQALWLLREMPATGLTPN----VISY 469

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           N +ID      ++ I         VE+L  M   G ++P+  ++  +I +     + + A
Sbjct: 470 NSAIDACAKTGRSKI--------AVELLREMPAHG-LAPDVITYSAVIASCAMGRQWEEA 520

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L LFREM + G   +V   N  I+        EE+ ++L EM   G  P   +  +    
Sbjct: 521 LDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA 580

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +       ++L+R+M   G  P        +      G   EA   L DM+  G  PD
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y++AI       R   A  L R +   G  PDV ++N  I       +   A ++  
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLF 700

Query: 524 EMITKGLIPSVATY 537
           EM   G+ P+ ATY
Sbjct: 701 EMRALGVSPNEATY 714



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 1/329 (0%)

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G    AL +   M + G   +   Y++ I    N+ + E + ELL  M   G  P   T 
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +S      +      A+ L+R M+ QG +P V   +  I    K G+   A   L +M  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  PD++ YS  I       + + A  L  ++   G   +++ Y+I+I    K  +  E
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A  L  EM   G+ P V TY+  I+   K G  ++A+  L R +  E  +P+ I+Y  +I
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLL-REMPMEGVTPNAISYGIVI 403

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
                 GR  +AI L  EM+  G  P+ I + A I    +  R   AL   R M   G+ 
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P++  + + I A        +A E+L+EM
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREM 492



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           + H    ++E  ++G   +A   L  M ++G  PD   YS+AI    + ++ + A+EL  
Sbjct: 151 MSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLA 210

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            + A G  PDV+ Y+  I+   K  R  EA  L   M  +G+ P+V  Y+  I+  C+ G
Sbjct: 211 SMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISA-CRKG 269

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
              +  + L + +     +PDVITY+T+ID     G+ + A  L  EM  KG   N IT+
Sbjct: 270 GQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITY 329

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +I    K  +   A+   R M+E G+ PD+  + + ISA   +     A  +L+EM
Sbjct: 330 SIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 242/519 (46%), Gaps = 35/519 (6%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M  +G   + YT   L++  C  G+ ++A+ V  ++   G     V ++ L+ AF + GE
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 151 VDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +D A  ++  M ++ N + N  TF  +++G  K  R++ A ++FD+M + G A D   Y+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            ++ G CK   L  +L ++SEM   G+ PD    + LI +    G L   V  + + R+ 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE- 179

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               L  N +    + +G   + + L  A++  E +   G++          P+   ++ 
Sbjct: 180 --RGLRMNEVTFTALIDGFCKKGF-LDDALLAVEEMRKCGIQ----------PSVVCYNA 226

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +IN   K G++DLA  L REM       +V  Y+ +I G C    L+ +++L ++M + G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T +S+ R LC  + +  A  L   M   G +P     T LI   CK G   +A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII---- 505
               +M+++G LPD+V YS  I GL    R   A  L   +      PD + Y+ +    
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 406

Query: 506 -----------ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
                      + G C    + EA+ ++  M+ +      + Y++LI+G C+ GN+ +A+
Sbjct: 407 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 466

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAG---RPDDAI 590
               +ML +   SP+  +  +L+ GL   G     D+AI
Sbjct: 467 SFHKQML-RSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 232/489 (47%), Gaps = 35/489 (7%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M + G A +   Y++++  LC   +LE A+ +  +M+G+G  P+    + L+ +    GE
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 256 L---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           L     +V  + E+ +     +  NS++  L   G ++ A  +   M++ E +A      
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLA------ 113

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    P+  S++ +++   K G L  +L++F EMTQ G + +V  + +LI   C +
Sbjct: 114 ---------PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 164

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             LE++  L+ +M E G +    T  ++    C++  +  AL  V +MR  G +P V   
Sbjct: 165 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 224

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI   CK G+   A   + +M  +   PD+V YS  I G   +  +D A +L + +  
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PD + Y+ +I GLC+ +R+ +A +LF  M+  G+ P   TY  LI+G CK GN+++
Sbjct: 285 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF---- 608
           A+     M+ K    PDV+TY+ LI+GL  + R  +A  L  ++  +   P+ I +    
Sbjct: 345 ALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403

Query: 609 -----------MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
                      +AL+ G C     + A   ++ M ++  K D  V+  LI       N  
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463

Query: 658 LAFEVLKEM 666
            A    K+M
Sbjct: 464 KALSFHKQM 472



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 243/528 (46%), Gaps = 42/528 (7%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P A+ +  L+      G ++ A  +   ++ EG   PN  ++N ++  LCK+  ++   
Sbjct: 42  APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
               EM   G   D  +   LL  YC  G   ++L+VF+E+   G V + V F+ L+ A 
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 161

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G +++A  L+ +M +  +R+NE TF  LI GF KK  +D AL   ++M K G     
Sbjct: 162 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEI 263
             Y+ +I G CK  ++++A +L  EM+   + PD    S +I+     G L     + + 
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 281

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              + V    +  +S++R L     ++ A  L + M++      +GV+          P+
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ------LGVQ----------PD 325

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +I+   K+G ++ ALSL  EM + G + +V  Y+ LI+GL  S R +E++ LL 
Sbjct: 326 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 385

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--------HEPWVKHN--- 432
           ++      P +   +++  C C + +    + L++   ++G        ++  +  N   
Sbjct: 386 KLYHEDPVPDNIKYDALMLC-CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 444

Query: 433 -----TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                ++LI   C+ G   +A  F   M++ GF P+     + + GL +   V  A    
Sbjct: 445 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504

Query: 488 RDICAHGCCP--DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           +D+    CCP  D  A   +I    K   V    D+   M   GL+PS
Sbjct: 505 QDLLT--CCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 271/614 (44%), Gaps = 66/614 (10%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA-CELIER 160
           +T   L+  Y    + D  L++   ++ +G   +     L+  F K GEVDKA C  +E 
Sbjct: 101 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEM 160

Query: 161 MDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           M+     L +   C  +I    K   +DKA  +  KM  SG A D   Y +II GLCK+K
Sbjct: 161 MEQG--VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CN 277
            ++ A ++  +M  +G  P+    + LI   S  G     V+   +      +  +  CN
Sbjct: 219 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 278

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADV----------------------GVEMLMI 315
           S +  L  +G  ++A  +  +M+   P  D+                       +  LM+
Sbjct: 279 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            KG ++PN   F+I+IN   + G +D A+ +F +M   G + +   +  +I  LC   RL
Sbjct: 339 TKG-IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTL 434
           +++      M + G  P+      + +  C   ++V A  L+ +M  +    P VK+ + 
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS----------------------AAIG 472
           +I  LCK G+  E    +  MVQ G  P++V ++                      A+IG
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 473 -------------GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                        G     R+D AL +FRD+   G  P  V Y+II+ GL +A+R   A+
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F+EMI  G   S+ TY +++ G C++   D+A + L ++        D+IT+  +I  
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV-KFDIITFNIVISA 636

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +   GR  +A  L++ +   G  PN  T+  +IT L K +    A   F  +++ G   D
Sbjct: 637 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 696

Query: 640 MFVFVALISAFLSE 653
             +   ++   L++
Sbjct: 697 SRLLNHIVRMLLNK 710



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 244/535 (45%), Gaps = 26/535 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A+ LF ++  +G+ +P     N +++ LCK   +D  E  +++M D G   D +T
Sbjct: 148 GEVDKAHCLFLEMMEQGV-LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 206

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C S   DKA  V  ++++ G     + ++ L+  +S  G  +++  + ++M 
Sbjct: 207 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 266

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-- 220
            C +          IH   K  R ++A  +FD M   G   D   Y  ++ G        
Sbjct: 267 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 326

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
           L     +++ M   GI P+  + + LI + +  G +   +L+ E  +++ +   T+   +
Sbjct: 327 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 386

Query: 279 IMRILVSNGSIDQAYNLLQAMIK-GEPIADV-----------------GVEML--MIFKG 318
           ++  L   G +D A +    M+  G P ++                    E++  M+ K 
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P    F  IIN L K+G++     +   M Q G   NV  +N+L++G C    +EE+
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           + LL  M   G +P  +   ++    C+   +  AL + R M  +G +P     ++++  
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L +  +   A +   +M++ G    I  Y   +GGL      D A  L   + A     D
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           ++ +NI+IS + K  R  EA++LF+ + T GL+P++ TY+++I    K  + ++A
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 681



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 64/503 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ +LI  + +  R D  L +  ++ K+G   D   Y +I G   K+ +++ A  L+ EM
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCLFLEM 160

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G+ P                                   L+CNSI++ L     +D+
Sbjct: 161 MEQGVLPKI---------------------------------LICNSIIKELCKMKEMDK 187

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A +++Q M+      D G+          +P+  ++ +II+ L K   +D A  +  +M 
Sbjct: 188 AESIVQKMV------DSGI----------APDLFTYSLIIDGLCKSKAMDKAERVLEQMV 231

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           + G   N   YN+LI G   S    ES  + ++M   G  PT    NS    L +     
Sbjct: 232 EAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTN 291

Query: 412 GALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTD-------MVQEGFLPD 463
            A  +   M ++G +P  + ++T+L      HG A      L D       M+ +G  P+
Sbjct: 292 EAKCIFDSMVLKGPKPDIISYSTML------HGYATATDSCLADVHNIFNLMLTKGIAPN 345

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              ++  I        +D A+ +F D+   G  PD V +  +IS LC+  R+ +A   FN
Sbjct: 346 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 405

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            M+  G+ PS A Y  LI G C  G + +A   +S M+ K+   P V  ++++I+ LC  
Sbjct: 406 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 465

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR  +   + + M + G  PN +TF +L+ G C       A      M   G++P+ +++
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 525

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             L+  +        A  V ++M
Sbjct: 526 GTLVDGYCKNGRIDDALTVFRDM 548



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/502 (22%), Positives = 219/502 (43%), Gaps = 59/502 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ ++Y+ +++ LCKS ++D  E  L++M + G   +  T   L+  Y  SG +++++ 
Sbjct: 201 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 260

Query: 123 VFNE-------------------IIDHGWVDEH--VFSILLVAFSK------------WG 149
           VF +                   +  HG  +E   +F  +++   K            + 
Sbjct: 261 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 320

Query: 150 EVDKAC-----ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
               +C      +   M    I  N+  F +LI+ + +   +DKA+ +F+ M   G   D
Sbjct: 321 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 380

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              +  +I  LC+  +L+ AL  ++ M   G+ P   +   LI  C + GEL    + I 
Sbjct: 381 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 440

Query: 265 E--DRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTV 320
           E  ++D+    +   +SI+  L   G + +  +++  M++ G+                 
Sbjct: 441 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ----------------- 483

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F+ ++      G ++ A +L   M  IG   N ++Y  L+DG C + R++++  
Sbjct: 484 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 543

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           + R+M   G KPT    + +   L + +    A  +  +M   G    +    +++  LC
Sbjct: 544 VFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLC 603

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           ++    EA   L  +       DI+ ++  I  +  + R   A ELF  I  +G  P++ 
Sbjct: 604 RNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ 663

Query: 501 AYNIIISGLCKAQRVAEAEDLF 522
            Y+++I+ L K +   EA++LF
Sbjct: 664 TYSMMITNLIKEESYEEADNLF 685



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 23/385 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M D 
Sbjct: 352 LINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G V +
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 470

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  ++ 
Sbjct: 471 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +  T
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPT-SVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 589

Query: 274 LLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           +  ++   ++  L  N   D+A  LL+ +                F   V  +  +F+I+
Sbjct: 590 VSIHTYGVVLGGLCRNNCTDEANMLLEKL----------------FAMNVKFDIITFNIV 633

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ + K G+   A  LF  ++  G + N+  Y+ +I  L      EE+  L   +E+SG 
Sbjct: 634 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALN 415
                 LN + R L  + +V  A N
Sbjct: 694 ASDSRLLNHIVRMLLNKAEVAKASN 718



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 488 RDICAHGCCPDVVAYNIIIS----------------------------------GLCKAQ 513
           R  C     P +  YNI+I                                   G  K  
Sbjct: 89  RWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDG 148

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVIT 572
            V +A  LF EM+ +G++P +   N +I   CK   +D+A   + +M+  +SG +PD+ T
Sbjct: 149 EVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV--DSGIAPDLFT 206

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y+ +IDGLC +   D A  +  +M E G  PN IT+ +LI G         ++  F+ M 
Sbjct: 207 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 266

Query: 633 EKGMKP 638
             G+ P
Sbjct: 267 SCGVIP 272



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 37/248 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG +EEA  L D +   G+  PN Y Y  L++  CK+  +D      ++M   G      
Sbjct: 500 VGNMEEAFALLDAMASIGI-EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 558

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
             + +L     + +   A  +F+E+I+ G  V  H + ++L    +    D+A  L+E++
Sbjct: 559 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT------------------------ 197
              N++ +  TF ++I    K  R  +A +LFD ++                        
Sbjct: 619 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 678

Query: 198 -----------KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
                      KSG ASD+ + + I+  L    ++  A    S +  + +T +   +S L
Sbjct: 679 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 738

Query: 247 ITSCSDEG 254
            +  S EG
Sbjct: 739 ASLFSREG 746



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P++ TYN+LI+ + +    D  +  + R+L+   G PD  +Y +LI G    G  D A  
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-PDDFSY-SLIYGFVKDGEVDKAHC 155

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+ EM E+G  P  +   ++I  LCK      A    + M + G+ PD+F +  +I    
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 652 SELNPPLAFEVLKEM 666
                  A  VL++M
Sbjct: 216 KSKAMDKAERVLEQM 230


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 273/611 (44%), Gaps = 79/611 (12%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMRL 89
            A   LI    S G   EA   F +++ E  C P  + YN +L  L  S  +V L     
Sbjct: 140 AAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALY 199

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKW 148
             M   G   ++ T   L+   C  G    AL +F+E+I  G        +ILL +    
Sbjct: 200 NRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNA 259

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAM 207
           G++ +A  L+  M+D     +E T+   + G  K  RVD+A++  + +  +G F      
Sbjct: 260 GQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKG 319

Query: 208 YDVIIGGLCKNKQLEMALQLYSE-MKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIW 264
           Y  +I GL    + E   Q Y E ++ + ++PD  + + +I  C++ G         +  
Sbjct: 320 YSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEM 379

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           +++     T   N++++ L   G +D A +L+  M++   + D+                
Sbjct: 380 KEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDI---------------- 423

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I  L K+  +D A+ +F  M ++GC  +V  YN LIDGL  ++RLEE+  L  +
Sbjct: 424 HTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYK 483

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ME  G  P+ F            +  +GA       +V+  E   K    L++ +C+ G+
Sbjct: 484 ME-VGNNPSLFL-----------RLTLGA------NQVRDSETLQK----LVESMCQSGQ 521

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            ++A++ L  ++  G +PD+V Y+  + GL  ++ +D AL LFR++   G   D + Y  
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM---------- 554
           +I  L +A R  +A  LF +++  G  PS+  YN ++   C+   + QA+          
Sbjct: 582 LIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRK 641

Query: 555 -------------------LCLSRM------LEKESGSPDVITYTTLIDGLCIAGRPDDA 589
                               CL         +++E GS +   YT  + GL  AGR +DA
Sbjct: 642 YNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDA 701

Query: 590 IMLWNEMEEKG 600
           + +++ +EE G
Sbjct: 702 LKIFHILEESG 712



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 222/536 (41%), Gaps = 121/536 (22%)

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLL 259
           +DAAMYD I                 ++ + +G+ P       LI + +  G   E    
Sbjct: 119 ADAAMYDAI-----------------ADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEA 161

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILV-SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
              +  +      T + N+++R+LV S G++  A  L   M+    +             
Sbjct: 162 FSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCL------------- 208

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PN ++++++I+ L K G    AL LF EM   G   NV  +  L+  +CN+ +L+E+
Sbjct: 209 ---PNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEA 265

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH------------- 425
             LL  ME+ G  P   T N+    LC+   V  A+  +  +R  G              
Sbjct: 266 ENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLID 325

Query: 426 ------------------------EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
                                    P +   T++I+   + G+  +AF F  +M ++GF 
Sbjct: 326 GLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFT 385

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD  CY+  +  L D   +D A  L  ++  +    D+  Y  +I GLCK Q V EA  +
Sbjct: 386 PDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQV 445

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM--------------------- 560
           F+ M+  G  PSV TYN+LI+G  ++  +++A +   +M                     
Sbjct: 446 FDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRD 505

Query: 561 ---LEK------ESGS-----------------PDVITYTTLIDGLCIAGRPDDAIMLWN 594
              L+K      +SG                  PDV+TY TL++GLC     D A+ L+ 
Sbjct: 506 SETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFR 565

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           E++ KG   + IT+  LI  L +  R   AL  F+ +   G  P M ++ +++ + 
Sbjct: 566 ELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSL 621



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 9/209 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  +   G V +A  L   +   G+ VP+  +YN LL  LCK  ++D      +E+Q  
Sbjct: 512 LVESMCQSGQVLKAYKLLRGIIDSGV-VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 570

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G+  D+ T   L+     + +++ AL++F +I+  G      +++ ++ +  +  ++ +A
Sbjct: 571 GFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQA 630

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSR---VDKALQLFDKMTKSGFASDAAMYDVI 211
             L    D    + N      +I    KK     + +A++   K+ +   + ++  Y + 
Sbjct: 631 INLW--FDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIW 688

Query: 212 IGGLCKNKQLEMALQLYSEMKGSG--ITP 238
           + GL +  ++E AL+++  ++ SG  ITP
Sbjct: 689 LIGLIQAGRIEDALKIFHILEESGIDITP 717


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 246/522 (47%), Gaps = 41/522 (7%)

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
           ++ K G +D+A +  + M   N R+    +   I   V++SR D A Q +D+M   GF+ 
Sbjct: 18  SYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSL 77

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLV 260
           ++  Y   I GLCK K   +  +L  +M   G  PD   + I   L+  C ++ ++ L V
Sbjct: 78  NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLC-CENQLDVALGV 136

Query: 261 KEIWEDR----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            +   ++    D+ T T++ N + R     G  D A  + + M++               
Sbjct: 137 VQTMVEKGREPDIVTYTIVINGLCRA----GRFDSAVEIWRNMVR--------------- 177

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF-----LYNNLIDGLCN 371
           KG  SP+  +   ++  L  DGK+DLA  L      +G M+        +YN+LI+G C 
Sbjct: 178 KG-FSPDEKACRALVLGLCHDGKVDLAYEL-----TVGAMRGRIKFSKSIYNSLINGFCQ 231

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           +  ++++  ++  M  +G +P   T N +    C    +  A NL++KM   G EP V  
Sbjct: 232 AGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYS 291

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              L+K LCK  +  +A+  + + ++   L D+V Y+  I  L        A +LF ++ 
Sbjct: 292 YNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMG 351

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  PDVV + I+I    +      A+ L ++M   GL+P    Y  +++  CK+G + 
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411

Query: 552 QAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            A      M+  ESG +PDV++Y  LI+GLC A R  +A+ L+ +M   G  P+ +TF  
Sbjct: 412 MAHSVFCDMV--ESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKL 469

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +I GL    +   A   +  M EKG   D  V   L++A  S
Sbjct: 470 IIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHS 511



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 172/361 (47%), Gaps = 7/361 (1%)

Query: 311 EMLMIFKGTVSPNTSSFDI----IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           + L  F      N   F I     I  L++  + DLA   +  M   G   N F Y+  I
Sbjct: 27  QALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFI 86

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            GLC         +LL +M+  G+ P  +  N     LC    +  AL +V+ M  +G E
Sbjct: 87  SGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGRE 146

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +   T++I  LC+ G+   A     +MV++GF PD     A + GL    +VDLA EL
Sbjct: 147 PDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYEL 206

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
                          YN +I+G C+A  + +A+ + + M   G  P + TYN+L+N  C 
Sbjct: 207 TVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCD 266

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA-IMLWNEMEEKGCAPNR 605
              +++A   + +M E+    PDV +Y  L+ GLC A R D A +M+ N+ME KG   + 
Sbjct: 267 ELLLEEAENLMKKM-ERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC-DV 324

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           +++  +I  LC     + A   F  M  KG+ PD+  F  LI AFL E +  +A ++L +
Sbjct: 325 VSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQ 384

Query: 666 M 666
           M
Sbjct: 385 M 385



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 217/504 (43%), Gaps = 22/504 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL+++A   FD++ +   C   +  YN  +  L +    DL E     M   G+  + +T
Sbjct: 23  GLIDQALKTFDEMTKSN-CRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFT 81

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            +  +   C    F     +  ++   G+V D   ++I L       ++D A  +++ M 
Sbjct: 82  YSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMV 141

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +     +  T+ ++I+G  +  R D A++++  M + GF+ D      ++ GLC + +++
Sbjct: 142 EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVD 201

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           +A +L        I     I + LI      G         W D+          SI+  
Sbjct: 202 LAYELTVGAMRGRIKFSKSIYNSLINGFCQAG---------WIDK--------AQSIISF 244

Query: 283 LVSNGSIDQ--AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  NG       YN LL        + +    M  + +  V P+  S++ ++  L K  +
Sbjct: 245 MRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD A  +     +   + +V  YN +I  LC ++  + +Y+L  EM   G  P   T   
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + +   R      A  L+ +M   G  P     T ++  LCK GK   A     DMV+ G
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD+V Y+A I GL    RV  A+ L+ D+   G CPD V + +II GL   ++++ A 
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484

Query: 520 DLFNEMITKGLIPSVATYNLLING 543
            ++++M+ KG     A    L+N 
Sbjct: 485 RVWDQMMEKGFTLDGAVSETLVNA 508



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 7/199 (3%)

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y A I   +    +D AL+ F ++    C    + YN  I  L +  R   AE  ++ MI
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE---KESGSPDVITYTTLIDGLCIA 583
            +G   +  TY+  I+G CK  N     + + ++LE   +    PD+  Y   ++ LC  
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNF----VLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCE 127

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            + D A+ +   M EKG  P+ +T+  +I GLC+  R  +A+  +R M  KG  PD    
Sbjct: 128 NQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKAC 187

Query: 644 VALISAFLSELNPPLAFEV 662
            AL+     +    LA+E+
Sbjct: 188 RALVLGLCHDGKVDLAYEL 206



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/215 (20%), Positives = 106/215 (49%), Gaps = 2/215 (0%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A R+    ++  + ++++      +   +I+ L +    + A  LF+++  +G+  P
Sbjct: 299 LCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGI-TP 357

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  ++  L++A  +  S ++ +  L +M   G   D+   T ++   C +G+   A SVF
Sbjct: 358 DVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVF 417

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            ++++ G   + V ++ L+    +   V +A  L E M       +E TF ++I G + +
Sbjct: 418 CDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWE 477

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            ++  A +++D+M + GF  D A+ + ++  +  N
Sbjct: 478 KKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSN 512


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 226/469 (48%), Gaps = 26/469 (5%)

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           + + +Y+VII    +++ L+ ++  ++EM   G  P     + L+T              
Sbjct: 92  TKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCF 151

Query: 263 IWEDR-----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
             E +     DV +  +    +++     G I+++++LL             VE+     
Sbjct: 152 FNESKIKVVLDVYSFGI----VIKGCCEAGEIEKSFDLL-------------VELREF-- 192

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              SPN   +  +I+   K G+++ A  LF EM + G + N + Y  LI GL  +   ++
Sbjct: 193 -GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            +E+  +M+E G  P   T N +   LC+      A  +  +MR +G    +     LI 
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC+  KA EA   +  M  +G  P+++ Y+  I G   ++++  AL L RD+ + G  P
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            +V YNI++SG CK    + A  +  EM  +G+ PS  TY +LI+ + +S N+++A+   
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
           S M E+   +PDV TY+ LI G CI GR ++A  L+  M EK   PN + +  ++ G CK
Sbjct: 432 SSM-EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCK 490

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 AL  FR M+EK + P++  +  +I     E     A  ++++M
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 229/505 (45%), Gaps = 64/505 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV------AFSKWGEVDKACELIE 159
           ++  Y  S   D ++  FNE++D G+V   + F+ LL       +F++W      C   E
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW-----WCFFNE 154

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                 + L+  +F ++I G  +   ++K+  L  ++ + GF+ +  +Y  +I G CK  
Sbjct: 155 --SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A  L+ EM                      G+  L+  E W      T T+L + +
Sbjct: 213 EIEKAKDLFFEM----------------------GKFGLVANE-W------TYTVLIHGL 243

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    NG   Q + + + M +                  V PN  +++ ++N L KDG+
Sbjct: 244 FK----NGIKKQGFEMYEKMQEH----------------GVFPNLHTYNCVMNQLCKDGR 283

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A  +F EM + G   N+  YN LI GLC   +  E+ E++ +M+  G  P   T N+
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C  + +  AL+L R ++ +G  P +    +L+   CK G    A + + +M + G
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P  V Y+  I        ++ A++L   +   G  PDV  Y+++I G C   R+ EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF  M+ K   P+   YN ++ G+CK G+  +A+     M EKE   P+V +Y  +I+ 
Sbjct: 464 RLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL-PPNVASYRYMIEV 522

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPN 604
           LC   +  +A  L  +M + G  P+
Sbjct: 523 LCKERKSKEAEGLVEKMIDSGIGPS 547



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 214/503 (42%), Gaps = 49/503 (9%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  ++ A  +S S+D       EM D G+         LL     S  F++    FNE  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
               +D + F I++    + GE++K+ +L+  + +     N   +  LI G  KK  ++K
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF +M K G  ++   Y V+I GL KN   +   ++Y +M+  G+ P+         
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY----- 271

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                       N +M  L  +G    A+ +   M +       
Sbjct: 272 ----------------------------NCVMNQLCKDGRTKDAFKVFDEMRE------- 296

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   +G VS N  +++ +I  L ++ K + A  +  +M   G   N+  YN LIDG
Sbjct: 297 --------RG-VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDG 347

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            C   +L ++  L R+++  G  P+  T N +    C++ D  GA  +V++M  +G +P 
Sbjct: 348 FCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+LI    +     +A +  + M + G  PD+  YS  I G     R++ A  LF+
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK 467

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +      P+ V YN ++ G CK      A  LF EM  K L P+VA+Y  +I   CK  
Sbjct: 468 SMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 549 NIDQAMLCLSRMLEKESGSPDVI 571
              +A   + +M++   G  D I
Sbjct: 528 KSKEAEGLVEKMIDSGIGPSDSI 550



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 182/394 (46%), Gaps = 25/394 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G +I+     G +E++  L  +++  G   PN   Y  L++  CK   ++  +    E
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFS-PNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M  +G   +++T T L+     +G   +   ++ ++ +HG + + H ++ ++    K G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A ++ + M +  +  N  T+  LI G  ++ + ++A ++ D+M   G   +   Y+ 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR 267
           +I G C  ++L  AL L  ++K  G++P     + L++    +G+ +    +VKE+ E+R
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM-EER 402

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------ 315
            +    +    ++     + ++++A  L  +M +     DV    ++I            
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEA 462

Query: 316 ---FKGTVSPNTSSFDIIINTLL----KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
              FK  V       ++I NT++    K+G    AL LFREM +     NV  Y  +I+ 
Sbjct: 463 SRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           LC   + +E+  L+ +M +SG  P+   LN + R
Sbjct: 523 LCKERKSKEAEGLVEKMIDSGIGPSDSILNLISR 556


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 242/525 (46%), Gaps = 60/525 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + +  LL ++ K      V    K+M  +G   D YTLT ++  +C+  + D ALSV
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +I+  G                  + D A                 TF  L+ G    
Sbjct: 114 LAKILKLGH-----------------QPDTA-----------------TFTTLVRGLCVV 139

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +AL +FDKM   GF  +   Y  ++ GLCK++QL  AL L+SEM   GI+PD    
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199

Query: 244 SKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LI +  +  E   +T L+ E+ + + +  +  L N ++  L   G + +A++++  MI
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL-NIVVDALCKEGKVTEAHDVVDMMI 258

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +G      GVE          P+  ++  +++      ++D A+ +F  M + GC+ NV 
Sbjct: 259 QG------GVE----------PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV 302

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI+G C   R++++  L  EM      P   T +++   LC    +  A+ L  +M
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEM 362

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P +   ++L+  LCK+ +  EA   L  +      PD+  Y+ AI G+     +
Sbjct: 363 VACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDL 422

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + A +LF ++   G  PDV  +NI+I GLCK   + EA  LF EM   G + +  TYN +
Sbjct: 423 EAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTI 482

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI-----DGL 580
             G  ++    +A+  L  ML +   S DV T   L+     DGL
Sbjct: 483 TQGLLQNNKTSRAIQLLEEMLAR-GFSADVSTTALLVKMLSDDGL 526



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 226/482 (46%), Gaps = 56/482 (11%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D +  +I++ +F     VD A  ++ ++     + +  TF  L+ G     ++ +AL +F
Sbjct: 90  DVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVF 149

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           DKM   GF  +   Y  ++ GLCK++QL  AL L+SEM   GI+PD    + LI +  + 
Sbjct: 150 DKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNL 209

Query: 254 GE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            E   +T L+ E+ + + +  +  L N ++  L   G + +A++++              
Sbjct: 210 CEWKHVTTLLNEMVKSKIMPNVVSL-NIVVDALCKEGKVTEAHDVVD------------- 255

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
              M+ +G V P+  ++  +++      ++D A+ +F  M + GC+ NV  YN LI+G C
Sbjct: 256 ---MMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R++++  L  EM                   CR++ +                P   
Sbjct: 313 KIQRIDKAMYLFEEM-------------------CRQELI----------------PNTM 337

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             + LI  LC  G+  +A     +MV  G +P++V YS  +  L    R+  A+ L + I
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
                 PDV  YNI I G+C+A  +  A DLF+ +  +GL P V T+N++I G CK G +
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A   L R +++     +  TY T+  GL    +   AI L  EM  +G + +  T   
Sbjct: 458 DEASK-LFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 611 LI 612
           L+
Sbjct: 517 LV 518



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 228/507 (44%), Gaps = 59/507 (11%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D AL  F +M           +  ++  + K K     L L  +M   GI PD   L+ 
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 246 LITSCSD----EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           +I S       +  L++L K +      +T T    +++R L   G I +A ++   M+ 
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATF--TTLVRGLCVVGKIGEALDVFDKMV- 153

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
           GE                  PN  ++  ++N L KD +L  AL+LF EM   G   ++F 
Sbjct: 154 GEGF---------------QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFT 198

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LI  LCN    +    LL EM +S   P   +LN +   LC+   V  A ++V  M 
Sbjct: 199 YNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI 258

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G EP V     L+   C   +  EA +    MV+ G + ++V Y+  I G   I+R+D
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRID 318

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+ LF ++C     P+ + Y+ +I GLC   R+ +A  LFNEM+  G IP++ TY++L+
Sbjct: 319 KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILL 378

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG----------------- 584
           +  CK+  + +AM  L + +E  +  PDV  Y   IDG+C AG                 
Sbjct: 379 DYLCKNHRLAEAMALL-KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGL 437

Query: 585 RPD------------------DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           +PD                  +A  L+ EM+E GC  N  T+  +  GL + ++   A+ 
Sbjct: 438 QPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQ 497

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
               M  +G   D+    AL+   LS+
Sbjct: 498 LLEEMLARGFSADVST-TALLVKMLSD 523



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  VG + EA  +FD++  EG   PN  +Y  L+  LCK   +        EM   
Sbjct: 132 LVRGLCVVGKIGEALDVFDKMVGEGF-QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK 190

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D +T   L+   CN  ++    ++ NE++    +   V  +I++ A  K G+V +A
Sbjct: 191 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++++ M    +  +  T+  L+ G   +S +D+A+++FD M ++G   +   Y+ +I G
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK ++++ A+ L+ EM    + P+    S LI      G L   +    E        +
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE-------MV 363

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
            C  I  ++    SI     LL  + K   +A+    +  I    + P+   ++I I+ +
Sbjct: 364 ACGQIPNLVTY--SI-----LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G L+ A  LF  +   G   +V+ +N +I GLC    L+E+ +L REM+E+G     
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            T N++ + L +      A+ L+ +M  +G    V    LL+K L   G
Sbjct: 477 CTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 36/323 (11%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           NN      + N L+++      M      P  F    +   + + +     L+L +KM  
Sbjct: 25  NNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS 84

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P V   T++I   C   +   A   L  +++ G  PD   ++  + GL  + ++  
Sbjct: 85  FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE 144

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL++F  +   G  P+VV Y  +++GLCK +++ EA +LF+EMI KG+ P + TYN LI+
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204

Query: 543 G------W-----------------------------CKSGNIDQAMLCLSRMLEKESGS 567
                  W                             CK G + +A   +  M++     
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG-GVE 263

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PDV+TY  L+DG C+    D+A+ +++ M   GC  N +++  LI G CK  R   A+  
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
           F  M  + + P+   +  LI   
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGL 346


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 271/615 (44%), Gaps = 67/615 (10%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA-CELIER 160
           +T   L+  Y    + D  L++   ++ +G   +     L+  F K GEVDKA C  +E 
Sbjct: 177 HTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEM 236

Query: 161 MDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           M+     L +   C  +I    K   +DKA  +  KM  SG A D   Y +II GLCK+K
Sbjct: 237 MEQG--VLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--CN 277
            ++ A ++  +M  +G  P+    + LI   S  G     V+   +      +  +  CN
Sbjct: 295 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADV-----------------------GVEMLM 314
           S +  L  +G  ++A  +  +M+   P  D+                        +  LM
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLM 414

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + KG ++PN   F+I+IN   + G +D A+ +F +M   G + +   +  +I  LC   R
Sbjct: 415 LTKG-IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 473

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNT 433
           L+++      M + G  P+      + +  C   ++V A  L+ +M  +    P VK+ +
Sbjct: 474 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 533

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS----------------------AAI 471
            +I  LCK G+  E    +  MVQ G  P++V ++                      A+I
Sbjct: 534 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 593

Query: 472 G-------------GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G             G     R+D AL +FRD+   G  P  V Y+II+ GL +A+R   A
Sbjct: 594 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + +F+EMI  G   S+ TY +++ G C++   D+A + L ++        D+IT+  +I 
Sbjct: 654 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF-DIITFNIVIS 712

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            +   GR  +A  L++ +   G  PN  T+  +IT L K +    A   F  +++ G   
Sbjct: 713 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 772

Query: 639 DMFVFVALISAFLSE 653
           D  +   ++   L++
Sbjct: 773 DSRLLNHIVRMLLNK 787



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 227/556 (40%), Gaps = 94/556 (16%)

Query: 154 ACELIERMDDCNIRLNE----KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           A EL +RMD      +      T+ +LI  + +  R D  L +  ++ K+G   D   Y 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +I G   K+ +++ A  L+ EM   G+ P                               
Sbjct: 216 LIYG-FVKDGEVDKAHCLFLEMMEQGVLPKI----------------------------- 245

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               L+CNSI++ L     +D+A +++Q M+      D G+          +P+  ++ +
Sbjct: 246 ----LICNSIIKELCKMKEMDKAESIVQKMV------DSGI----------APDLFTYSL 285

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           II+ L K   +D A  +  +M + G   N   YN+LI G   S    ES  + ++M   G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP--------------------WV 429
             PT    NS    L +      A  +   M ++G +P                    WV
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405

Query: 430 K-HN-----------------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
             HN                  +LI    + G   +A     DM  +G +PD V ++  I
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 465

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L  I R+D AL  F  +   G  P    Y  +I G C    + +A++L +EM+ K + 
Sbjct: 466 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 525

Query: 532 P-SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           P  V  ++ +IN  CK G + +    +  M++     P+V+T+ +L++G C+ G  ++A 
Sbjct: 526 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ-RPNVVTFNSLMEGYCLVGNMEEAF 584

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L + M   G  PN   +  L+ G CK  R   AL  FR M  KG+KP   ++  ++   
Sbjct: 585 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 644

Query: 651 LSELNPPLAFEVLKEM 666
                   A ++  EM
Sbjct: 645 FQARRTTAAKKMFHEM 660



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 243/536 (45%), Gaps = 27/536 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A+ LF ++  +G+ +P     N +++ LCK   +D  E  +++M D G   D +T
Sbjct: 224 GEVDKAHCLFLEMMEQGV-LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 282

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + ++   C S   DKA  V  ++++ G     + ++ L+  +S  G  +++  + ++M 
Sbjct: 283 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 342

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK---NK 219
            C +          IH   K  R ++A  +FD M   G   D   Y      +C      
Sbjct: 343 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTV 402

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCN 277
              M   +++ M   GI P+  + + LI + +  G +   +L+ E  +++ +   T+   
Sbjct: 403 VWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 462

Query: 278 SIMRILVSNGSIDQAYNLLQAMIK-GEPIADV-----------------GVEML--MIFK 317
           +++  L   G +D A +    M+  G P ++                    E++  M+ K
Sbjct: 463 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 522

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P    F  IIN L K+G++     +   M Q G   NV  +N+L++G C    +EE
Sbjct: 523 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 582

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++ LL  M   G +P  +   ++    C+   +  AL + R M  +G +P     ++++ 
Sbjct: 583 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 642

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            L +  +   A +   +M++ G    I  Y   +GGL      D A  L   + A     
Sbjct: 643 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 702

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           D++ +NI+IS + K  R  EA++LF+ + T GL+P++ TY+++I    K  + ++A
Sbjct: 703 DIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEA 758



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/503 (21%), Positives = 218/503 (43%), Gaps = 60/503 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ ++Y+ +++ LCKS ++D  E  L++M + G   +  T   L+  Y  SG +++++ 
Sbjct: 277 APDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVR 336

Query: 123 VFNE-------------------IIDHGWVDEH--VFSILLVAFSKWGEVDKACE----- 156
           VF +                   +  HG  +E   +F  +++   K   +  +       
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVC 396

Query: 157 -------------LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                        +   M    I  N+  F +LI+ + +   +DKA+ +F+ M   G   
Sbjct: 397 YWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 456

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   +  +I  LC+  +L+ AL  ++ M   G+ P   +   LI  C + GEL    + I
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 516

Query: 264 WE--DRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGT 319
            E  ++D+    +   +SI+  L   G + +  +++  M++ G+                
Sbjct: 517 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQ---------------- 560

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN  +F+ ++      G ++ A +L   M  IG   N ++Y  L+DG C + R++++ 
Sbjct: 561 -RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 619

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            + R+M   G KPT    + +   L + +    A  +  +M   G    +    +++  L
Sbjct: 620 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 679

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C++    EA   L  +       DI+ ++  I  +  + R   A ELF  I  +G  P++
Sbjct: 680 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 739

Query: 500 VAYNIIISGLCKAQRVAEAEDLF 522
             Y+++I+ L K +   EA++LF
Sbjct: 740 QTYSMMITNLIKEESYEEADNLF 762



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 187/430 (43%), Gaps = 23/430 (5%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
              LI      G++++A ++F+ ++ +G+ +P+  ++  ++ +LC+   +D    +   M
Sbjct: 426 FNILINAYARCGMMDKAMLIFEDMQNKGM-IPDTVTFATVISSLCRIGRLDDALHKFNHM 484

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGE 150
            D G    +     L+Q  CN G+  KA  + +E+++       V  FS ++    K G 
Sbjct: 485 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 544

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +  ++++ M     R N  TF  L+ G+     +++A  L D M   G   +  +Y  
Sbjct: 545 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 604

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G CKN +++ AL ++ +M   G+ P   +L  +I     +   T   K+++ +   +
Sbjct: 605 LVDGYCKNGRIDDALTVFRDMLHKGVKPT-SVLYSIILHGLFQARRTTAAKKMFHEMIES 663

Query: 271 TMTLLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
             T+  ++   ++  L  N   D+A  LL+ +                F   V  +  +F
Sbjct: 664 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL----------------FAMNVKFDIITF 707

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I+I+ + K G+   A  LF  ++  G + N+  Y+ +I  L      EE+  L   +E+
Sbjct: 708 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEK 767

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           SG       LN + R L  + +V  A N +  +            +LL     + GK  E
Sbjct: 768 SGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 827

Query: 448 AFRFLTDMVQ 457
             + L    Q
Sbjct: 828 HIKLLPAKYQ 837


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 245/541 (45%), Gaps = 46/541 (8%)

Query: 120 ALSVFNEIIDHGW----VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           A+S+FN +   G      D   F IL+      G ++     + ++    +R    TF  
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 176 LIHGFVKKSRVDKALQL-FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-- 232
           L+     + R   A+ +   +M + G   D   Y  ++ GLC  K+ E A +L   M   
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 233 GSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           G    P+    + +I     EG++    TL  K +  D  +    + CNS++  L    +
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKML--DHGIPPNVVTCNSVIDGLCKVQA 302

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +D+A  +LQ MI          E +M       PN ++++ +I+  L  G+   A+ + +
Sbjct: 303 MDKAEAVLQQMID---------EHIM-------PNCTTYNSLIHGYLSSGQWTEAVRILK 346

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM++ G   NV  Y+ LID LC S    E+ E+   M +SG KP   T  S+        
Sbjct: 347 EMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           ++V   N+   M   G  P      + I   CK G+  EA      M Q+GF+PDIV Y+
Sbjct: 407 NLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYT 466

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I GL  I R+D A+  F  +   G  PD++ +N +I G     +  +AE+LF EM+ +
Sbjct: 467 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDR 526

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P+V T+N +I+   K G + +A   L  ++ +    P+V++Y T+I G  IAG   +
Sbjct: 527 GIPPNVNTFNSMIDKLFKEGKVTEARK-LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGE 585

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
            + L ++M   G  P  +TF  L+ G                M   G+KPD+     LI 
Sbjct: 586 VMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLID 629

Query: 649 A 649
           +
Sbjct: 630 S 630



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 231/516 (44%), Gaps = 46/516 (8%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK---ALQLFDKMTKSG---FASDAAMYD 209
           EL++R    +I    +    +    V  S  D    A+ +F++M ++G    A D A + 
Sbjct: 89  ELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFG 148

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-TSCSDEGELTLLVKEIWEDRD 268
           ++I   C    L +      ++  +G+       + L+ T C+             E R 
Sbjct: 149 ILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCA-------------EKRT 195

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNL------LQAMIKGEPIADVGVEMLMIFKGTVSP 322
            + M    N ++R +   G     ++       L A  K E  A++ + M+        P
Sbjct: 196 SDAM----NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAEL-IHMMAEDGDNCPP 250

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S+  +I+   K+G +  A +LF +M   G   NV   N++IDGLC    ++++  +L
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 310

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           ++M +    P   T NS+            A+ ++++M   G  P V   ++LI  LCK 
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKS 370

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYS------AAIGGLIDIKRV-DLALELFRDICAHGC 495
           G   EA      M+Q G  P+   Y       A  G L+D+  V DL ++       +G 
Sbjct: 371 GLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQ-------NGM 423

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P    +NI I   CK  R+ EA   FN+M  +G +P +  Y  +I+G CK G +D AM 
Sbjct: 424 RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS 483

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              +M++ +  SPD+IT+ TLI G  + G+ + A  L+ EM ++G  PN  TF ++I  L
Sbjct: 484 RFCQMID-DGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            K  +   A   F +M   G KP++  +  +I  + 
Sbjct: 543 FKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYF 578



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 171/355 (48%), Gaps = 4/355 (1%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSL-FREMTQIGCMQNVFLYNNLIDGLCNSN 373
           I K  +     +F  ++ TL  + +   A+++  R M ++GC  +VF Y  L+ GLC   
Sbjct: 170 IIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEK 229

Query: 374 RLEESYELLREMEESG--FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + EE+ EL+  M E G    P   +  ++     +  DV  A  L  KM   G  P V  
Sbjct: 230 KCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVT 289

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              +I  LCK     +A   L  M+ E  +P+   Y++ I G +   +   A+ + +++ 
Sbjct: 290 CNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  P+VV Y+++I  LCK+   AEA ++FN MI  G  P+ +TY  L++G+   GN+ 
Sbjct: 350 RDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLV 409

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
             M  +  ++ +    P    +   I   C  GR D+A + +N+M+++G  P+ + +  +
Sbjct: 410 D-MNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTV 468

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GLCK  R   A+  F  M + G+ PD+  F  LI  F        A E+  EM
Sbjct: 469 IDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 224/539 (41%), Gaps = 48/539 (8%)

Query: 52  LFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           +F+++ R G     P+  ++  L+   C +  ++L    L ++   G      T TPLL+
Sbjct: 128 MFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLR 187

Query: 110 VYCNSGQFDKALS-VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM--DDCN 165
             C   +   A++ V   + + G   D   ++ LL       + ++A ELI  M  D  N
Sbjct: 188 TLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDN 247

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  ++  +IHGF K+  V KA  LF KM   G   +    + +I GLCK + ++ A 
Sbjct: 248 CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 307

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-DRDVNTMTLLCNSIM-RIL 283
            +  +M    I P+    + LI      G+ T  V+ + E  RD     ++  S++   L
Sbjct: 308 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 284 VSNGSIDQAYNLLQAMIKG--EPIADV------------------GVEMLMIFKGTVSPN 323
             +G   +A  +  +MI+   +P A                     V+ LM+  G + P 
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG-MRPG 426

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              F+I I    K G+LD A   F +M Q G M ++  Y  +IDGLC   RL+++     
Sbjct: 427 RHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFC 486

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M + G  P   T N++            A  L  +M  +G  P V     +I +L K G
Sbjct: 487 QMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEG 546

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI------------- 490
           K  EA +    M + G  P++V Y+  I G      V   ++L  D+             
Sbjct: 547 KVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFN 606

Query: 491 ------CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
                  + G  PDVV    +I   C+  R+ +   LF EM+ K       T N+ + G
Sbjct: 607 TLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRG 665



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 187/467 (40%), Gaps = 71/467 (15%)

Query: 47  EEANMLFDQVKREG-LCVPNNYSY-----------------------------------N 70
           EEA  L   +  +G  C PN  SY                                   N
Sbjct: 232 EEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 291

Query: 71  CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
            +++ LCK  ++D  E  L++M D     +  T   L+  Y +SGQ+ +A+ +  E+   
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 351

Query: 131 GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           G     V +S+L+    K G   +A E+   M     + N  T+  L+HG+  +  +   
Sbjct: 352 GQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDM 411

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             + D M ++G      ++++ I   CK  +L+ A   +++M+  G  PD    + +I  
Sbjct: 412 NNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471

Query: 250 CSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
               G L   +    +  D  ++   +  N+++     +G  ++A  L   M+      D
Sbjct: 472 LCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM------D 525

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
            G+           PN ++F+ +I+ L K+GK+  A  LF  M + G   NV  YN +I 
Sbjct: 526 RGI----------PPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIH 575

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G   +  + E  +LL +M   G KPT  T N+                L+  M   G +P
Sbjct: 576 GYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT----------------LLDGMVSMGLKP 619

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            V     LI   C+ G+  +      +M+ +    D +  +  + G+
Sbjct: 620 DVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 25/286 (8%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           A  R +   +++S    +    G L+    + G + + N + D + + G+  P  + +N 
Sbjct: 374 AEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM-RPGRHVFNI 432

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
            + A CK   +D   +   +MQ  G+  D    T ++   C  G+ D A+S F ++ID G
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
              + + F+ L+  F+  G+ +KA EL   M D  I  N  TF  +I    K+ +V +A 
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE-------------------M 231
           +LFD M ++G   +   Y+ +I G     ++   ++L  +                   M
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612

Query: 232 KGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMT 273
              G+ PD      LI SC ++G     LTL  + + +    +T+T
Sbjct: 613 VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 167/676 (24%), Positives = 295/676 (43%), Gaps = 35/676 (5%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           ++++K +          LI  L + G  E+++ L  ++++ G   P   +YN +L   CK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY-APTIVTYNTVLHWYCK 280

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
                     L  M+  G   D  T   L+   C S +  K   +  ++       +E  
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ L+  FS  G+V  A +L+  M    +  N  TF  LI G + +    +AL++F  M 
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
             G       Y V++ GLCKN + ++A   Y  MK +G+       + +I      G   
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 255 ELTLLVKEIWEDR---DVNTMTLLCNSIMRI-----------------LVSNGSIDQA-- 292
           E  +L+ E+ +D    D+ T + L N   ++                 L  NG I     
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           YN  +     E I    +   MI +G  + +  +F++++ +L K GK+  A    R MT 
Sbjct: 521 YNCCRMGCLKEAIR---IYEAMILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + N   ++ LI+G  NS    +++ +  EM + G  PT FT  S+ + LC+   +  
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636

Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A   ++ +  V      V +NTLL   +CK G   +A     +MVQ   LPD   Y++ I
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLT-AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695

Query: 472 GGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
            GL    +  +A+   ++  A G   P+ V Y   + G+ KA +         +M   G 
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + T N +I+G+ + G I++    L  M   ++G P++ TY  L+ G         + 
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSF 814

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +L+  +   G  P+++T  +L+ G+C+ +     L   +    +G++ D + F  LIS  
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874

Query: 651 LSELNPPLAFEVLKEM 666
            +      AF+++K M
Sbjct: 875 CANGEINWAFDLVKVM 890



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 263/616 (42%), Gaps = 25/616 (4%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           + L + +KR+ +C P+  ++N L+  LC   S +     +++M+  G+     T   +L 
Sbjct: 219 SFLKEMLKRK-IC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIR 167
            YC  G+F  A+ + + +   G VD  V  +++L+    +   + K   L+  M    I 
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            NE T+  LI+GF  + +V  A QL ++M   G + +   ++ +I G       + AL++
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILV 284
           +  M+  G+TP       L+       E  L  +  +     N +    +    ++  L 
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLC 454

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG +D+A  LL  M K                  + P+  ++  +IN   K G+   A 
Sbjct: 455 KNGFLDEAVVLLNEMSKD----------------GIDPDIVTYSALINGFCKVGRFKTAK 498

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +   + ++G   N  +Y+ LI   C    L+E+  +   M   G    HFT N +   L
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A   +R M   G  P       LI      G+ ++AF    +M + G  P  
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y + + GL     +  A +  + + A     D V YN +++ +CK+  +A+A  LF E
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ + ++P   TY  LI+G C+ G    A+L       + +  P+ + YT  +DG+  AG
Sbjct: 679 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 738

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +    I    +M+  G  P+ +T  A+I G  +  +          M  +   P++  + 
Sbjct: 739 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 798

Query: 645 ALISAFLSELNPPLAF 660
            L+  +    +   +F
Sbjct: 799 ILLHGYSKRKDVSTSF 814



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 257/605 (42%), Gaps = 65/605 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDC 164
           L++VY   G    +L +F  +  +G+ +  V++   +L +  K GE       ++ M   
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 227

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  +  TF +LI+    +   +K+  L  KM KSG+A     Y+ ++   CK  + + A
Sbjct: 228 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMR 281
           ++L   MK  G+  D    + LI        +    LL++++   R ++   +  N+++ 
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEVTYNTLIN 346

Query: 282 ILVSNGSIDQAYNLL---------------QAMIKGEPIADVGVEMLMIF-----KGTVS 321
              + G +  A  LL                A+I G        E L +F     KG ++
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LT 405

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  S+ ++++ L K+ + DLA   +  M + G       Y  +IDGLC +  L+E+  L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 382 LREMEESGFKPTHFTLNSMFRCLCR------------RQDVVG----------------- 412
           L EM + G  P   T +++    C+            R   VG                 
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 413 ------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A+ +   M ++GH        +L+  LCK GK  EA  F+  M  +G LP+ V 
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   I G  +      A  +F ++   G  P    Y  ++ GLCK   + EAE     + 
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                     YN L+   CKSGN+ +A+     M+++ S  PD  TYT+LI GLC  G+ 
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKGKT 704

Query: 587 DDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             AI+   E E +G   PN++ +   + G+ K  + +A +     M   G  PD+    A
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764

Query: 646 LISAF 650
           +I  +
Sbjct: 765 MIDGY 769



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 221/515 (42%), Gaps = 43/515 (8%)

Query: 174 CVLIHGFVKKSRVDKALQLFDKMT----KSGFA------------SDAAMYDVIIGGLCK 217
           C+  H  V+    D A  +  +++    KS F             S+ ++YD++I    +
Sbjct: 116 CITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLR 175

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDR---DVNT 271
              ++ +L+++  M   G  P     + ++ S    GE   +   +KE+ + +   DV T
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 235

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +L N    +L + GS +++  L+Q M K                   +P   +++ ++
Sbjct: 236 FNILIN----VLCAEGSFEKSSYLMQKMEKS----------------GYAPTIVTYNTVL 275

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G+   A+ L   M   G   +V  YN LI  LC SNR+ + Y LLR+M +    
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N++         V+ A  L+ +M   G  P       LI      G   EA + 
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M  +G  P  V Y   + GL      DLA   +  +  +G C   + Y  +I GLCK
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              + EA  L NEM   G+ P + TY+ LING+CK G    A   + R+  +   SP+ I
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGI 514

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y+TLI   C  G   +AI ++  M  +G   +  TF  L+T LCK  +   A    R M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              G+ P+   F  LI+ + +      AF V  EM
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 166/704 (23%), Positives = 273/704 (38%), Gaps = 136/704 (19%)

Query: 58   REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
            R+ +  PN  +YN L+        V +    L EM  +G   +  T   L+  + + G F
Sbjct: 330  RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389

Query: 118  DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
             +AL +F  +   G     V + +LL    K  E D A     RM    + +   T+  +
Sbjct: 390  KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449

Query: 177  IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
            I G  K   +D+A+ L ++M+K G   D   Y  +I G CK  + + A ++   +   G+
Sbjct: 450  IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509

Query: 237  TPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSI 289
            +P+  I S LI +C   G L   ++ I+E        RD  T  +L  S    L   G +
Sbjct: 510  SPNGIIYSTLIYNCCRMGCLKEAIR-IYEAMILEGHTRDHFTFNVLVTS----LCKAGKV 564

Query: 290  DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
             +A   ++ M                    + PNT SFD +IN     G+   A S+F E
Sbjct: 565  AEAEEFMRCMTSD----------------GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608

Query: 350  MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-------------------------- 383
            MT++G     F Y +L+ GLC    L E+ + L+                          
Sbjct: 609  MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668

Query: 384  ---------EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
                     EM +    P  +T  S+   LCR+   V A+   ++   +G+  P     T
Sbjct: 669  LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728

Query: 434  LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
              +  + K G+      F   M   G  PDIV  +A I G   + +++   +L  ++   
Sbjct: 729  CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788

Query: 494  GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV------------------- 534
               P++  YNI++ G  K + V+ +  L+  +I  G++P                     
Sbjct: 789  NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848

Query: 535  ----------------ATYNLLINGWCKSGNID---------------------QAMLCL 557
                             T+N+LI+  C +G I+                      AM+ +
Sbjct: 849  LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908

Query: 558  ---------SRM----LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAP 603
                     SRM    + K+  SP+   Y  LI+GLC  G    A ++  EM   K C P
Sbjct: 909  LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968

Query: 604  NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            N +   A++  L KC +   A +  R M +  + P +  F  L+
Sbjct: 969  N-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 223/553 (40%), Gaps = 57/553 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N   + +LI  ++++  +  +L++F  M   GF       + I+G + K+ +        
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            EM    I PD    + LI     EG  E +  + +  E        +  N+++      
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSF 327
           G    A  LL  M      ADV    ++I                    K  + PN  ++
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +IN    +GK+ +A  L  EM   G   N   +N LIDG  +    +E+ ++   ME 
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  +   +   LC+  +   A     +M+  G        T +I  LCK+G   E
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE-------------------LFR 488
           A   L +M ++G  PDIV YSA I G   + R   A E                   L  
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521

Query: 489 DICAHGCCPDVV----------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           + C  GC  + +                 +N++++ LCKA +VAEAE+    M + G++P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           +  +++ LING+  SG   +A      M  K    P   TY +L+ GLC  G   +A   
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
              +     A + + +  L+T +CK      A+  F  M ++ + PD + + +LIS    
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700

Query: 653 ELNPPLAFEVLKE 665
           +    +A    KE
Sbjct: 701 KGKTVIAILFAKE 713



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 275/637 (43%), Gaps = 74/637 (11%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G ++EA +L +++ ++G+  P+  +Y+ L+   CK       +  +  +   G   +   
Sbjct: 457  GFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
             + L+   C  G   +A+ ++  +I  G   +H  F++L+ +  K G+V +A E +  M 
Sbjct: 516  YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--------------------- 201
               I  N  +F  LI+G+       KA  +FD+MTK G                      
Sbjct: 576  SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635

Query: 202  --------------ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                          A D  MY+ ++  +CK+  L  A+ L+ EM    I PD    + LI
Sbjct: 636  EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695

Query: 248  TSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI------------DQAY 293
            +    +G+  + +L  +  E R      +L N +M     +G              +Q  
Sbjct: 696  SGLCRKGKTVIAILFAKEAEARG----NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751

Query: 294  NL--------LQAMIKG-------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
            NL          AMI G       E   D+  EM     G   PN ++++I+++   K  
Sbjct: 752  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG---PNLTTYNILLHGYSKRK 808

Query: 339  KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
             +  +  L+R +   G + +    ++L+ G+C SN LE   ++L+     G +   +T N
Sbjct: 809  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868

Query: 399  SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
             +    C   ++  A +LV+ M   G          ++  L ++ +  E+   L +M ++
Sbjct: 869  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928

Query: 459  GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
            G  P+   Y   I GL  +  +  A  +  ++ AH  CP  VA + ++  L K  +  EA
Sbjct: 929  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              L   M+   L+P++A++  L++  CK+GN+ +A L L  ++       D+++Y  LI 
Sbjct: 989  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA-LELRVVMSNCGLKLDLVSYNVLIT 1047

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            GLC  G    A  L+ EM+  G   N  T+ ALI GL
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/557 (22%), Positives = 228/557 (40%), Gaps = 63/557 (11%)

Query: 25   RCFMS----PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
            RC  S    P  + F  LI   G+ G   +A  +FD++ + G   P  ++Y  LL+ LCK
Sbjct: 572  RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH-PTFFTYGSLLKGLCK 630

Query: 79   SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
               +   E  LK +       D      LL   C SG   KA+S+F E++    + D + 
Sbjct: 631  GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690

Query: 138  FSILL------------VAFSKWGE---------------VD---KACE------LIERM 161
            ++ L+            + F+K  E               VD   KA +        E+M
Sbjct: 691  YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750

Query: 162  DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D+     +  T   +I G+ +  +++K   L  +M       +   Y++++ G  K K +
Sbjct: 751  DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810

Query: 222  EMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSI 279
              +  LY  +  +GI PD      L+    +    E+ L + + +  R V       N +
Sbjct: 811  STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    +NG I+ A++L++ M        +G+ +          +  + D +++ L ++ +
Sbjct: 871  ISKCCANGEINWAFDLVKVM------TSLGISL----------DKDTCDAMVSVLNRNHR 914

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               +  +  EM++ G       Y  LI+GLC    ++ ++ +  EM      P +   ++
Sbjct: 915  FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 974

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            M R L +      A  L+R M      P +   T L+   CK+G  +EA      M   G
Sbjct: 975  MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 1034

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               D+V Y+  I GL     + LA EL+ ++   G   +   Y  +I GL   +      
Sbjct: 1035 LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1094

Query: 520  D-LFNEMITKGLIPSVA 535
            D +  +++ +G I S++
Sbjct: 1095 DIILKDLLARGFITSMS 1111


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 235/538 (43%), Gaps = 52/538 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + ++ LL A+ +            ++   G      TLT L+  YC+      A S+
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              I+  G+    V F+ L+  F   G V KA      +      L+E ++  LI+G  K
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +   ALQL  KM +     +   Y  +I GLCK++ +  AL+L+S +   GI  D   
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI  C   G+        W                          +A  LL  M++G
Sbjct: 233 YNSLIHGCCSVGQ--------WR-------------------------EATRLLTMMVRG 259

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++P+  +F+I+++ L K+G++  A  +F  M + G   ++  Y
Sbjct: 260 ----------------NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTY 303

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L++G C SN + E+ EL   M + G +P     N +    C+   V  A+ L +++R 
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRC 363

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P +     LI  LCK G+       + +M   G  PDIV Y+  +      K  + 
Sbjct: 364 KNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEK 423

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ LFR I   G  PD   Y++I+   CK +++  AE+    ++  G  P+V TY ++IN
Sbjct: 424 AISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
             CK  + D+AM  LS+M + +   PD +T+ T+I  L      D A  L  EM E+G
Sbjct: 483 ALCKDCSFDEAMTLLSKMDDNDC-PPDAVTFETIIGALQERNETDKAEKLRLEMIERG 539



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 219/497 (44%), Gaps = 28/497 (5%)

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   VD  L  F++M +        ++D ++G + +      A+ L+S++   GITP   
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 242 ILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-L 296
            L+ LI     +  L+    LL   +      N +T   N+++     NG + +A    L
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTF--NTLINGFCINGMVSKAMAFRL 149

Query: 297 QAMIKGEPIADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKDG 338
             M KG P+ +     L+                  + +  V PN  ++  +I+ L KD 
Sbjct: 150 DLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDR 209

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  AL LF  +T  G + +V  YN+LI G C+  +  E+  LL  M      P  +T N
Sbjct: 210 LIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFN 269

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +   LC+   +V A  +   M  +G +P +     L++  C      EA      MV+ 
Sbjct: 270 ILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PD++ Y+  I G   I  VD A+ LF++I      P++  YN +I GLCK  R++  
Sbjct: 330 GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCV 389

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           ++L +EM  +G  P + TYN+ ++ +CKS   ++A+    +++  +   PD   Y  +++
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV--QGIWPDFYMYDVIVE 447

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
             C   +   A      +   GC PN  T+  +I  LCK      A+     M +    P
Sbjct: 448 NFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPP 507

Query: 639 DMFVFVALISAFLSELN 655
           D   F  +I A L E N
Sbjct: 508 DAVTFETIIGA-LQERN 523



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 226/508 (44%), Gaps = 25/508 (4%)

Query: 27  FMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           F+    LG ++R    +G    A  LF Q+  +G+  P+  +   L+   C    +    
Sbjct: 56  FVFDKLLGAIVR----MGHYPTAISLFSQLHSKGI-TPSIATLTILINCYCHQAHLSFAF 110

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAF 145
             L  +   G+  +  T   L+  +C +G   KA++   +++  G+ +DE  +  L+   
Sbjct: 111 SLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGL 170

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G+   A +L+++M++  +R N  T+  +I G  K   +  AL+LF  +T  G   D 
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL--VKEI 263
             Y+ +I G C   Q   A +L + M    I PD    + L+ +   EG +     V  +
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              R      +  N++M     + ++ +A  L   M+K       G+E          P+
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR------GLE----------PD 334

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++++IN   K   +D A+ LF+E+     + N+  YN+LIDGLC   R+    EL+ 
Sbjct: 335 VLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVD 394

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM + G  P   T N      C+ +    A++L R++ VQG  P      ++++  CK  
Sbjct: 395 EMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGE 453

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K   A   L  ++  G  P++  Y+  I  L      D A+ L   +  + C PD V + 
Sbjct: 454 KLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFE 513

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLI 531
            II  L +     +AE L  EMI +GL+
Sbjct: 514 TIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 1/275 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  F  + +   + R      A++L  ++  +G  P +   T+LI   C       AF  
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  +++ GF P++V ++  I G      V  A+    D+ A G   D  +Y  +I+GLCK
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +  +A  L  +M    + P++ TY+ +I+G CK   I  A+   S ++       DV+
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS-LVTSRGILVDVV 231

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y +LI G C  G+  +A  L   M      P+  TF  L+  LCK  R   A   F +M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++G KPD+  + AL+  F    N   A E+   M
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 3/214 (1%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  L +  LI     + +V+EA +LF +++ + L VPN  +YN L++ LCK   +  V
Sbjct: 331 LEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL-VPNLATYNSLIDGLCKLGRMSCV 389

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
           +  + EM D G   D  T    L  +C S  ++KA+S+F +I+   W D +++ +++  F
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENF 449

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K  ++  A E ++ +       N +T+ ++I+   K    D+A+ L  KM  +    DA
Sbjct: 450 CKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDA 509

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             ++ IIG L +  + + A +L  EM   G+  D
Sbjct: 510 VTFETIIGALQERNETDKAEKLRLEMIERGLVND 543


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 251/557 (45%), Gaps = 65/557 (11%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK-EMQDYGWGYDKYT 103
           +V+ A + F+++ R+    P+   +N +L  L K+ +     + L  +M+  G   D +T
Sbjct: 46  VVDNAVLSFNRM-RQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFT 104

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L+ L+  YC+ GQ   A SVF +I+  G                 G+V++A    + +  
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAKILKMGLCLN-------------GKVNEALLFHDHVLA 151

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
               LN  T+ +LI+G  K  +   ALQ+  ++      ++  MY  II GLCK+K +  
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A  LYSEM    I P     S LI                            C      +
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYG-------------------------FC------I 240

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           V  G    A+ L               EM+M     ++P+  +F+I+++ L K+GK+  A
Sbjct: 241 V--GKFKDAFRLFN-------------EMVM---KNINPDAYTFNILVDALCKEGKIKEA 282

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++   M + G    V  YN L+DG C  N + ++  +L  +      P   + N M   
Sbjct: 283 KNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMING 342

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            C+ + V  AL L  +M  +G  P       LI  LCK G+   A+  + +M       D
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           IV Y++ I      + VD A+ L + I  HG  P++  YNI+I GLCK  ++  A+D+F 
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +++ KG   +  TYN++ING CK G  D+A + LS+M E     PD +TY T+I  L   
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKM-EDNGIIPDAVTYETIIQALFHK 521

Query: 584 GRPDDAIMLWNEMEEKG 600
              + A  L  EM  KG
Sbjct: 522 DENEKAQKLLREMVIKG 538



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 236/533 (44%), Gaps = 71/533 (13%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK-QLEMALQLYS 229
           KT   + +GFV    VD A+  F++M +         ++ I+  L K K      L L +
Sbjct: 36  KTVLSIPNGFV----VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLST 91

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M+  G+ PD   LS LI      G++T               ++    +   L  NG +
Sbjct: 92  QMESKGVKPDLFTLSILINCYCHLGQMTF------------AFSVFAKILKMGLCLNGKV 139

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           ++A      ++  + +  +G  +          N  ++ I+IN L K G+   AL + R+
Sbjct: 140 NEA------LLFHDHVLALGFHL----------NHVTYGILINGLCKMGQTRAALQVLRQ 183

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           +       NV +Y+ +IDGLC    + ++Y L  EM      PT  T +S+    C    
Sbjct: 184 IEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGK 243

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              A  L  +M ++   P      +L+  LCK GK  EA   +  M++EG  P +V Y+ 
Sbjct: 244 FKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNT 303

Query: 470 -----------------------------------AIGGLIDIKRVDLALELFRDICAHG 494
                                               I G   IK VD AL LF ++C  G
Sbjct: 304 LMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRG 363

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P  V YN +I GLCKA R+  A +L +EM    +   + TYN LI+ +CK+ ++D+A+
Sbjct: 364 IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAI 423

Query: 555 LCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
             + ++  KE G  P++ TY  LIDGLC  G+  +A  ++ ++  KG   N  T+  +I 
Sbjct: 424 ALVKKI--KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMIN 481

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           GLCK      A V    M++ G+ PD   +  +I A   +     A ++L+EM
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 194/452 (42%), Gaps = 76/452 (16%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP--------------------NNYSYNC 71
            L  LI C   +G +  A  +F ++ + GLC+                     N+ +Y  
Sbjct: 104 TLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGI 163

Query: 72  LLEALCKSCSVDLVEMRLKEMQDY--------------GWGYDK---------------- 101
           L+  LCK          L++++                G   DK                
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 102 -----YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKAC 155
                 T + L+  +C  G+F  A  +FNE++      D + F+IL+ A  K G++ +A 
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            +I  M    +     T+  L+ G+   + V KA  +   +++   A ++  Y+++I G 
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTM 272
           CK K ++ AL L+ EM   GI P     + LI      G +     LV E+  +  +   
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM-HNNCIPAD 402

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +  NS++ +   N  +D+A  L++       I + G++          PN  +++I+I+
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKK------IKEHGIQ----------PNMCTYNILID 446

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K G+L  A  +F+++   G   N + YN +I+GLC     +E+  LL +ME++G  P
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP 506

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
              T  ++ + L  + +   A  L+R+M ++G
Sbjct: 507 DAVTYETIIQALFHKDENEKAQKLLREMVIKG 538


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 167/676 (24%), Positives = 295/676 (43%), Gaps = 35/676 (5%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           ++++K +          LI  L + G  E+++ L  ++++ G   P   +YN +L   CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY-APTIVTYNTVLHWYCK 240

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
                     L  M+  G   D  T   L+   C S +  K   +  ++       +E  
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ L+  FS  G+V  A +L+  M    +  N  TF  LI G + +    +AL++F  M 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
             G       Y V++ GLCKN + ++A   Y  MK +G+       + +I      G   
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 255 ELTLLVKEIWED---RDVNTMTLLCNSIMRI-----------------LVSNGSIDQA-- 292
           E  +L+ E+ +D    D+ T + L N   ++                 L  NG I     
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           YN  +     E I    +   MI +G  + +  +F++++ +L K GK+  A    R MT 
Sbjct: 481 YNCCRMGCLKEAIR---IYEAMILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + N   ++ LI+G  NS    +++ +  EM + G  PT FT  S+ + LC+   +  
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A   ++ +  V      V +NTLL   +CK G   +A     +MVQ   LPD   Y++ I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLT-AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 472 GGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
            GL    +  +A+   ++  A G   P+ V Y   + G+ KA +         +M   G 
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + T N +I+G+ + G I++    L  M   ++G P++ TY  L+ G         + 
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +L+  +   G  P+++T  +L+ G+C+ +     L   +    +G++ D + F  LIS  
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 651 LSELNPPLAFEVLKEM 666
            +      AF+++K M
Sbjct: 835 CANGEINWAFDLVKVM 850



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 263/616 (42%), Gaps = 25/616 (4%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           + L + +KR+ +C P+  ++N L+  LC   S +     +++M+  G+     T   +L 
Sbjct: 179 SFLKEMLKRK-IC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIR 167
            YC  G+F  A+ + + +   G VD  V  +++L+    +   + K   L+  M    I 
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            NE T+  LI+GF  + +V  A QL ++M   G + +   ++ +I G       + AL++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILV 284
           +  M+  G+TP       L+       E  L  +  +     N +    +    ++  L 
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG +D+A  LL  M K                  + P+  ++  +IN   K G+   A 
Sbjct: 415 KNGFLDEAVVLLNEMSKD----------------GIDPDIVTYSALINGFCKVGRFKTAK 458

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +   + ++G   N  +Y+ LI   C    L+E+  +   M   G    HFT N +   L
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A   +R M   G  P       LI      G+ ++AF    +M + G  P  
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 578

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y + + GL     +  A +  + + A     D V YN +++ +CK+  +A+A  LF E
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ + ++P   TY  LI+G C+ G    A+L       + +  P+ + YT  +DG+  AG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +    I    +M+  G  P+ +T  A+I G  +  +          M  +   P++  + 
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 645 ALISAFLSELNPPLAF 660
            L+  +    +   +F
Sbjct: 759 ILLHGYSKRKDVSTSF 774



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 257/605 (42%), Gaps = 65/605 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDC 164
           L++VY   G    +L +F  +  +G+ +  V++   +L +  K GE       ++ M   
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  +  TF +LI+    +   +K+  L  KM KSG+A     Y+ ++   CK  + + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMR 281
           ++L   MK  G+  D    + LI        +    LL++++   R ++   +  N+++ 
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEVTYNTLIN 306

Query: 282 ILVSNGSIDQAYNLL---------------QAMIKGEPIADVGVEMLMIF-----KGTVS 321
              + G +  A  LL                A+I G        E L +F     KG ++
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LT 365

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  S+ ++++ L K+ + DLA   +  M + G       Y  +IDGLC +  L+E+  L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 382 LREMEESGFKPTHFTLNSMFRCLCR------------RQDVVG----------------- 412
           L EM + G  P   T +++    C+            R   VG                 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 413 ------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A+ +   M ++GH        +L+  LCK GK  EA  F+  M  +G LP+ V 
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   I G  +      A  +F ++   G  P    Y  ++ GLCK   + EAE     + 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                     YN L+   CKSGN+ +A+     M+++ S  PD  TYT+LI GLC  G+ 
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKGKT 664

Query: 587 DDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             AI+   E E +G   PN++ +   + G+ K  + +A +     M   G  PD+    A
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 646 LISAF 650
           +I  +
Sbjct: 725 MIDGY 729



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 221/515 (42%), Gaps = 43/515 (8%)

Query: 174 CVLIHGFVKKSRVDKALQLFDKMT----KSGFA------------SDAAMYDVIIGGLCK 217
           C+  H  V+    D A  +  +++    KS F             S+ ++YD++I    +
Sbjct: 76  CITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLR 135

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDR---DVNT 271
              ++ +L+++  M   G  P     + ++ S    GE   +   +KE+ + +   DV T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +L N    +L + GS +++  L+Q M                 K   +P   +++ ++
Sbjct: 196 FNILIN----VLCAEGSFEKSSYLMQKM----------------EKSGYAPTIVTYNTVL 235

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G+   A+ L   M   G   +V  YN LI  LC SNR+ + Y LLR+M +    
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N++         V+ A  L+ +M   G  P       LI      G   EA + 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M  +G  P  V Y   + GL      DLA   +  +  +G C   + Y  +I GLCK
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              + EA  L NEM   G+ P + TY+ LING+CK G    A   + R+  +   SP+ I
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGI 474

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y+TLI   C  G   +AI ++  M  +G   +  TF  L+T LCK  +   A    R M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              G+ P+   F  LI+ + +      AF V  EM
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 166/704 (23%), Positives = 273/704 (38%), Gaps = 136/704 (19%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+ +  PN  +YN L+        V +    L EM  +G   +  T   L+  + + G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            +AL +F  +   G     V + +LL    K  E D A     RM    + +   T+  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K   +D+A+ L ++M+K G   D   Y  +I G CK  + + A ++   +   G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSI 289
           +P+  I S LI +C   G L   ++ I+E        RD  T  +L  S    L   G +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIR-IYEAMILEGHTRDHFTFNVLVTS----LCKAGKV 524

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A   ++ M                    + PNT SFD +IN     G+   A S+F E
Sbjct: 525 AEAEEFMRCMTSD----------------GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-------------------------- 383
           MT++G     F Y +L+ GLC    L E+ + L+                          
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628

Query: 384 ---------EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
                    EM +    P  +T  S+   LCR+   V A+   ++   +G+  P     T
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             +  + K G+      F   M   G  PDIV  +A I G   + +++   +L  ++   
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV------------------- 534
              P++  YNI++ G  K + V+ +  L+  +I  G++P                     
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808

Query: 535 ----------------ATYNLLINGWCKSGNID---------------------QAMLCL 557
                            T+N+LI+  C +G I+                      AM+ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868

Query: 558 ---------SRM----LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAP 603
                    SRM    + K+  SP+   Y  LI+GLC  G    A ++  EM   K C P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           N +   A++  L KC +   A +  R M +  + P +  F  L+
Sbjct: 929 N-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 223/553 (40%), Gaps = 57/553 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N   + +LI  ++++  +  +L++F  M   GF       + I+G + K+ +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            EM    I PD    + LI     EG  E +  + +  E        +  N+++      
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSF 327
           G    A  LL  M      ADV    ++I                    K  + PN  ++
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +IN    +GK+ +A  L  EM   G   N   +N LIDG  +    +E+ ++   ME 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  +   +   LC+  +   A     +M+  G        T +I  LCK+G   E
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE-------------------LFR 488
           A   L +M ++G  PDIV YSA I G   + R   A E                   L  
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 489 DICAHGCCPDVV----------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           + C  GC  + +                 +N++++ LCKA +VAEAE+    M + G++P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           +  +++ LING+  SG   +A      M  K    P   TY +L+ GLC  G   +A   
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
              +     A + + +  L+T +CK      A+  F  M ++ + PD + + +LIS    
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 653 ELNPPLAFEVLKE 665
           +    +A    KE
Sbjct: 661 KGKTVIAILFAKE 673



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 275/637 (43%), Gaps = 74/637 (11%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G ++EA +L +++ ++G+  P+  +Y+ L+   CK       +  +  +   G   +   
Sbjct: 417  GFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
             + L+   C  G   +A+ ++  +I  G   +H  F++L+ +  K G+V +A E +  M 
Sbjct: 476  YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--------------------- 201
               I  N  +F  LI+G+       KA  +FD+MTK G                      
Sbjct: 536  SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 202  --------------ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                          A D  MY+ ++  +CK+  L  A+ L+ EM    I PD    + LI
Sbjct: 596  EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 248  TSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI------------DQAY 293
            +    +G+  + +L  +  E R      +L N +M     +G              +Q  
Sbjct: 656  SGLCRKGKTVIAILFAKEAEARG----NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 294  NL--------LQAMIKG-------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
            NL          AMI G       E   D+  EM     G   PN ++++I+++   K  
Sbjct: 712  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG---PNLTTYNILLHGYSKRK 768

Query: 339  KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
             +  +  L+R +   G + +    ++L+ G+C SN LE   ++L+     G +   +T N
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 399  SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
             +    C   ++  A +LV+ M   G          ++  L ++ +  E+   L +M ++
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 459  GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
            G  P+   Y   I GL  +  +  A  +  ++ AH  CP  VA + ++  L K  +  EA
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              L   M+   L+P++A++  L++  CK+GN+ +A L L  ++       D+++Y  LI 
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA-LELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            GLC  G    A  L+ EM+  G   N  T+ ALI GL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/557 (22%), Positives = 228/557 (40%), Gaps = 63/557 (11%)

Query: 25   RCFMS----PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
            RC  S    P  + F  LI   G+ G   +A  +FD++ + G   P  ++Y  LL+ LCK
Sbjct: 532  RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH-PTFFTYGSLLKGLCK 590

Query: 79   SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
               +   E  LK +       D      LL   C SG   KA+S+F E++    + D + 
Sbjct: 591  GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 138  FSILL------------VAFSKWGE---------------VD---KACE------LIERM 161
            ++ L+            + F+K  E               VD   KA +        E+M
Sbjct: 651  YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710

Query: 162  DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D+     +  T   +I G+ +  +++K   L  +M       +   Y++++ G  K K +
Sbjct: 711  DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770

Query: 222  EMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSI 279
              +  LY  +  +GI PD      L+    +    E+ L + + +  R V       N +
Sbjct: 771  STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    +NG I+ A++L++ M        +G+ +          +  + D +++ L ++ +
Sbjct: 831  ISKCCANGEINWAFDLVKVM------TSLGISL----------DKDTCDAMVSVLNRNHR 874

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               +  +  EM++ G       Y  LI+GLC    ++ ++ +  EM      P +   ++
Sbjct: 875  FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 934

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            M R L +      A  L+R M      P +   T L+   CK+G  +EA      M   G
Sbjct: 935  MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 994

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               D+V Y+  I GL     + LA EL+ ++   G   +   Y  +I GL   +      
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054

Query: 520  D-LFNEMITKGLIPSVA 535
            D +  +++ +G I S++
Sbjct: 1055 DIILKDLLARGFITSMS 1071


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 167/676 (24%), Positives = 295/676 (43%), Gaps = 35/676 (5%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           ++++K +          LI  L + G  E+++ L  ++++ G   P   +YN +L   CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY-APTIVTYNTVLHWYCK 240

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
                     L  M+  G   D  T   L+   C S +  K   +  ++       +E  
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ L+  FS  G+V  A +L+  M    +  N  TF  LI G + +    +AL++F  M 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
             G       Y V++ GLCKN + ++A   Y  MK +G+       + +I      G   
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 255 ELTLLVKEIWED---RDVNTMTLLCNSIMRI-----------------LVSNGSIDQA-- 292
           E  +L+ E+ +D    D+ T + L N   ++                 L  NG I     
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           YN  +     E I    +   MI +G  + +  +F++++ +L K GK+  A    R MT 
Sbjct: 481 YNCCRMGCLKEAIR---IYEAMILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + N   ++ LI+G  NS    +++ +  EM + G  PT FT  S+ + LC+   +  
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A   ++ +  V      V +NTLL   +CK G   +A     +MVQ   LPD   Y++ I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLT-AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 472 GGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
            GL    +  +A+   ++  A G   P+ V Y   + G+ KA +         +M   G 
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + T N +I+G+ + G I++    L  M   ++G P++ TY  L+ G         + 
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSF 774

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +L+  +   G  P+++T  +L+ G+C+ +     L   +    +G++ D + F  LIS  
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834

Query: 651 LSELNPPLAFEVLKEM 666
            +      AF+++K M
Sbjct: 835 CANGEINWAFDLVKVM 850



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 263/616 (42%), Gaps = 25/616 (4%)

Query: 50  NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           + L + +KR+ +C P+  ++N L+  LC   S +     +++M+  G+     T   +L 
Sbjct: 179 SFLKEMLKRK-IC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIR 167
            YC  G+F  A+ + + +   G VD  V  +++L+    +   + K   L+  M    I 
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
            NE T+  LI+GF  + +V  A QL ++M   G + +   ++ +I G       + AL++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILV 284
           +  M+  G+TP       L+       E  L  +  +     N +    +    ++  L 
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLC 414

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            NG +D+A  LL  M K                  + P+  ++  +IN   K G+   A 
Sbjct: 415 KNGFLDEAVVLLNEMSKD----------------GIDPDIVTYSALINGFCKVGRFKTAK 458

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            +   + ++G   N  +Y+ LI   C    L+E+  +   M   G    HFT N +   L
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+   V  A   +R M   G  P       LI      G+ ++AF    +M + G  P  
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 578

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y + + GL     +  A +  + + A     D V YN +++ +CK+  +A+A  LF E
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M+ + ++P   TY  LI+G C+ G    A+L       + +  P+ + YT  +DG+  AG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +    I    +M+  G  P+ +T  A+I G  +  +          M  +   P++  + 
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 645 ALISAFLSELNPPLAF 660
            L+  +    +   +F
Sbjct: 759 ILLHGYSKRKDVSTSF 774



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 257/605 (42%), Gaps = 65/605 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDC 164
           L++VY   G    +L +F  +  +G+ +  V++   +L +  K GE       ++ M   
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I  +  TF +LI+    +   +K+  L  KM KSG+A     Y+ ++   CK  + + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMR 281
           ++L   MK  G+  D    + LI        +    LL++++   R ++   +  N+++ 
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEVTYNTLIN 306

Query: 282 ILVSNGSIDQAYNLL---------------QAMIKGEPIADVGVEMLMIF-----KGTVS 321
              + G +  A  LL                A+I G        E L +F     KG ++
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LT 365

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  S+ ++++ L K+ + DLA   +  M + G       Y  +IDGLC +  L+E+  L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 382 LREMEESGFKPTHFTLNSMFRCLCR------------RQDVVG----------------- 412
           L EM + G  P   T +++    C+            R   VG                 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 413 ------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 A+ +   M ++GH        +L+  LCK GK  EA  F+  M  +G LP+ V 
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +   I G  +      A  +F ++   G  P    Y  ++ GLCK   + EAE     + 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
                     YN L+   CKSGN+ +A+     M+++ S  PD  TYT+LI GLC  G+ 
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKGKT 664

Query: 587 DDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             AI+   E E +G   PN++ +   + G+ K  + +A +     M   G  PD+    A
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 646 LISAF 650
           +I  +
Sbjct: 725 MIDGY 729



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 221/515 (42%), Gaps = 43/515 (8%)

Query: 174 CVLIHGFVKKSRVDKALQLFDKMT----KSGFA------------SDAAMYDVIIGGLCK 217
           C+  H  V+    D A  +  +++    KS F             S+ ++YD++I    +
Sbjct: 76  CITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLR 135

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDR---DVNT 271
              ++ +L+++  M   G  P     + ++ S    GE   +   +KE+ + +   DV T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +L N    +L + GS +++  L+Q M K                   +P   +++ ++
Sbjct: 196 FNILIN----VLCAEGSFEKSSYLMQKMEKS----------------GYAPTIVTYNTVL 235

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K G+   A+ L   M   G   +V  YN LI  LC SNR+ + Y LLR+M +    
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N++         V+ A  L+ +M   G  P       LI      G   EA + 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M  +G  P  V Y   + GL      DLA   +  +  +G C   + Y  +I GLCK
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
              + EA  L NEM   G+ P + TY+ LING+CK G    A   + R+  +   SP+ I
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGI 474

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y+TLI   C  G   +AI ++  M  +G   +  TF  L+T LCK  +   A    R M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              G+ P+   F  LI+ + +      AF V  EM
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 166/704 (23%), Positives = 273/704 (38%), Gaps = 136/704 (19%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           R+ +  PN  +YN L+        V +    L EM  +G   +  T   L+  + + G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
            +AL +F  +   G     V + +LL    K  E D A     RM    + +   T+  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G  K   +D+A+ L ++M+K G   D   Y  +I G CK  + + A ++   +   G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSI 289
           +P+  I S LI +C   G L   ++ I+E        RD  T  +L  S    L   G +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIR-IYEAMILEGHTRDHFTFNVLVTS----LCKAGKV 524

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A   ++ M                    + PNT SFD +IN     G+   A S+F E
Sbjct: 525 AEAEEFMRCMTSD----------------GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-------------------------- 383
           MT++G     F Y +L+ GLC    L E+ + L+                          
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628

Query: 384 ---------EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
                    EM +    P  +T  S+   LCR+   V A+   ++   +G+  P     T
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
             +  + K G+      F   M   G  PDIV  +A I G   + +++   +L  ++   
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV------------------- 534
              P++  YNI++ G  K + V+ +  L+  +I  G++P                     
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808

Query: 535 ----------------ATYNLLINGWCKSGNID---------------------QAMLCL 557
                            T+N+LI+  C +G I+                      AM+ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868

Query: 558 ---------SRM----LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAP 603
                    SRM    + K+  SP+   Y  LI+GLC  G    A ++  EM   K C P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           N +   A++  L KC +   A +  R M +  + P +  F  L+
Sbjct: 929 N-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 223/553 (40%), Gaps = 57/553 (10%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N   + +LI  ++++  +  +L++F  M   GF       + I+G + K+ +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 229 SEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            EM    I PD    + LI     EG  E +  + +  E        +  N+++      
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSF 327
           G    A  LL  M      ADV    ++I                    K  + PN  ++
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +IN    +GK+ +A  L  EM   G   N   +N LIDG  +    +E+ ++   ME 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  +   +   LC+  +   A     +M+  G        T +I  LCK+G   E
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE-------------------LFR 488
           A   L +M ++G  PDIV YSA I G   + R   A E                   L  
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 489 DICAHGCCPDVV----------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           + C  GC  + +                 +N++++ LCKA +VAEAE+    M + G++P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           +  +++ LING+  SG   +A      M  K    P   TY +L+ GLC  G   +A   
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
              +     A + + +  L+T +CK      A+  F  M ++ + PD + + +LIS    
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 653 ELNPPLAFEVLKE 665
           +    +A    KE
Sbjct: 661 KGKTVIAILFAKE 673



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 275/637 (43%), Gaps = 74/637 (11%)

Query: 44   GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            G ++EA +L +++ ++G+  P+  +Y+ L+   CK       +  +  +   G   +   
Sbjct: 417  GFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 104  LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
             + L+   C  G   +A+ ++  +I  G   +H  F++L+ +  K G+V +A E +  M 
Sbjct: 476  YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 163  DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--------------------- 201
               I  N  +F  LI+G+       KA  +FD+MTK G                      
Sbjct: 536  SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 202  --------------ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                          A D  MY+ ++  +CK+  L  A+ L+ EM    I PD    + LI
Sbjct: 596  EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 248  TSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI------------DQAY 293
            +    +G+  + +L  +  E R      +L N +M     +G              +Q  
Sbjct: 656  SGLCRKGKTVIAILFAKEAEARG----NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 294  NL--------LQAMIKG-------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
            NL          AMI G       E   D+  EM     G   PN ++++I+++   K  
Sbjct: 712  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG---PNLTTYNILLHGYSKRK 768

Query: 339  KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
             +  +  L+R +   G + +    ++L+ G+C SN LE   ++L+     G +   +T N
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 399  SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
             +    C   ++  A +LV+ M   G          ++  L ++ +  E+   L +M ++
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 459  GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
            G  P+   Y   I GL  +  +  A  +  ++ AH  CP  VA + ++  L K  +  EA
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 519  EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
              L   M+   L+P++A++  L++  CK+GN+ +A L L  ++       D+++Y  LI 
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA-LELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 579  GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            GLC  G    A  L+ EM+  G   N  T+ ALI GL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/557 (22%), Positives = 228/557 (40%), Gaps = 63/557 (11%)

Query: 25   RCFMS----PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
            RC  S    P  + F  LI   G+ G   +A  +FD++ + G   P  ++Y  LL+ LCK
Sbjct: 532  RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCK 590

Query: 79   SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
               +   E  LK +       D      LL   C SG   KA+S+F E++    + D + 
Sbjct: 591  GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650

Query: 138  FSILL------------VAFSKWGE---------------VD---KACE------LIERM 161
            ++ L+            + F+K  E               VD   KA +        E+M
Sbjct: 651  YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710

Query: 162  DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D+     +  T   +I G+ +  +++K   L  +M       +   Y++++ G  K K +
Sbjct: 711  DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770

Query: 222  EMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSI 279
              +  LY  +  +GI PD      L+    +    E+ L + + +  R V       N +
Sbjct: 771  STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830

Query: 280  MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    +NG I+ A++L++ M        +G+ +          +  + D +++ L ++ +
Sbjct: 831  ISKCCANGEINWAFDLVKVM------TSLGISL----------DKDTCDAMVSVLNRNHR 874

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
               +  +  EM++ G       Y  LI+GLC    ++ ++ +  EM      P +   ++
Sbjct: 875  FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 934

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            M R L +      A  L+R M      P +   T L+   CK+G  +EA      M   G
Sbjct: 935  MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 994

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
               D+V Y+  I GL     + LA EL+ ++   G   +   Y  +I GL   +      
Sbjct: 995  LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054

Query: 520  D-LFNEMITKGLIPSVA 535
            D +  +++ +G I S++
Sbjct: 1055 DIILKDLLARGFITSMS 1071


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 226/518 (43%), Gaps = 52/518 (10%)

Query: 136 HVFSILLVAFSKWGEV--DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + +S+L+  ++   ++  ++A EL+  M+   +R N  T+   ++G  +  +V  A    
Sbjct: 212 YSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFL 271

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
             + + G+  ++  ++ +I G C + Q+  A++++  MK  G  PD    S L+      
Sbjct: 272 QMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDG---- 327

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                                        L   G +   Y +L             VEM 
Sbjct: 328 -----------------------------LCKQGDVLTGYYML-------------VEMA 345

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +  ++PN  S+  +++ L + G+++LA  LF+ +   G   +  +Y+ ++ G C   
Sbjct: 346 ---RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            LE  Y+L  +M    F P  +  +S+    CR + +  AL +   M   G  P V   T
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCT 462

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+      G   EAF FL  + Q G +P++  Y   I GL  + + +    +F D+   
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD V Y+III G  KA  + EA  L+ +M+ +G  P++ TY  LING C    + + 
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           M     M+  E  +PD I YT+LI   C       A+ ++ EME +G + +   +  LI 
Sbjct: 583 MTLFKHMI-GEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           G  K      A +    M  KG+ P +  +  LI  + 
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYF 679



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 227/488 (46%), Gaps = 39/488 (7%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL--EMALQLYSEMKG 233
           L+ G V+ +++     LFD M  SG + +   Y V++       +L  E A +L SEM+ 
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEV 241

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC-----------NSIMRI 282
            G+ P+       +       +    VK  W     N + +LC           N+++  
Sbjct: 242 EGVRPNAATYGTYLYGLCRAKQ----VKSAW-----NFLQMLCQRGYPCNSYCFNAVIHG 292

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              +G + +A  +   M K   +                P+  S+ I+++ L K G +  
Sbjct: 293 FCHDGQVHKAVEVFDGMKKCGFV----------------PDVHSYSILVDGLCKQGDVLT 336

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
              +  EM + G   N+  Y++L+ GLC + R+E ++EL + +++ GFK  H   + +  
Sbjct: 337 GYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLH 396

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C+  D+    +L   M      P   + + LI   C+H +  EA      M+ +G  P
Sbjct: 397 GCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICP 456

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++V  +  + G  +   +  A      +   G  P++  Y +II+GLCK  +  +   +F
Sbjct: 457 NVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIF 516

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +MI +G +P    Y+++I+G+ K+ ++ +A     +M++ E   P++ TYT+LI+GLC 
Sbjct: 517 ADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD-EGTKPNIFTYTSLINGLCH 575

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             +  + + L+  M  +G  P+RI + +LI   CK    +AAL  FR M+ +G+  D FV
Sbjct: 576 DDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFV 635

Query: 643 FVALISAF 650
           +  LI  F
Sbjct: 636 YTCLIGGF 643



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/572 (25%), Positives = 250/572 (43%), Gaps = 34/572 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR--LKEM 92
           FL++ L     +     LFD +K  G   PN YSY+ L+        + L E +  L EM
Sbjct: 181 FLLKGLVEGNQIMYVRSLFDDMKISGPS-PNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEV 151
           +  G   +  T    L   C + Q   A +    +   G+  + + F+ ++  F   G+V
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQV 299

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            KA E+ + M  C    +  ++ +L+ G  K+  V     +  +M ++G   +   Y  +
Sbjct: 300 HKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           + GLC+  ++E+A +L+  +K  G   D  + S ++  C    +L +   ++W D     
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY-DLWND----- 413

Query: 272 MTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSF 327
                      +V +  +  AYN   L+ A  +   + + + V  LMI  G + PN  + 
Sbjct: 414 -----------MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDG-ICPNVVTC 461

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+++    +G +  A     ++ Q G + N+  Y  +I+GLC  N+  + + +  +M +
Sbjct: 462 TILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIK 521

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G+ P     + +     +  D+  A  L  KM  +G +P +   T LI  LC   K  E
Sbjct: 522 RGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPE 581

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
                  M+ EG  PD + Y++ I        +  ALE+FR++   G   D   Y  +I 
Sbjct: 582 VMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIG 641

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G  K   +  A+    EM+ KGL P+V TY  LI G+ K G+  +AM+  + ML+    +
Sbjct: 642 GFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQA-GIA 700

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           PD           CI G  +D     +  EEK
Sbjct: 701 PDAKLS-------CILGLGNDGDDFADSQEEK 725


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 226/498 (45%), Gaps = 53/498 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIR--LNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           ++ILL          +A +L+  M D   R  L+   +  +I+G +++ ++DKA  LFD 
Sbjct: 174 YTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDA 233

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G + D   Y  II  L K + ++ A Q+++ M  +G+ PD  + + L+        
Sbjct: 234 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHG------ 287

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                               C+S                       G+P   +G+   M 
Sbjct: 288 -------------------YCSS-----------------------GKPKEAIGIFKKMC 305

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
             G V P+  ++  +++ L K+GK   A  +F  + + G   +   Y  L+ G      L
Sbjct: 306 RHG-VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGAL 364

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E ++LL  M + G +  H   N +     +   V  AL +   MR QG  P + +   +
Sbjct: 365 VEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTV 424

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +  LC  G+  +A      +  EG  P+IV ++  I GL    + D   EL  ++   G 
Sbjct: 425 LDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGI 484

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
           C D + +N I+  LCK  RV EA++LF+ M+  G+ P+  TYN LI+G+C  G +D+AM 
Sbjct: 485 CLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 544

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M+      P  +TY T+I+G    GR +D + L  EM+ KG  P  +T+  L+ GL
Sbjct: 545 LLGVMVFNGV-KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 603

Query: 616 CKCDRPRAAL-VHFRMMK 632
            +  R  AA  ++ RM+K
Sbjct: 604 FQAGRTVAAKELYLRMIK 621



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 238/591 (40%), Gaps = 95/591 (16%)

Query: 120 ALSVFNEIIDHGWVDEH----VFSILLVAFSKWGEVDKACELIERMDDCNIR-----LNE 170
           A+S+FN +   G          + I++    + G +D A   + R+    +R     L  
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            +   L     +  R+D  L+   +M + G   D   Y +++ GLC +K  + AL L   
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLR---RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHI 196

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M                     +G   L         DV   T + N ++R     G +D
Sbjct: 197 M------------------ADHKGRCPL---------DVVAYTTVINGLLR----EGQLD 225

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +AY+L  AM+   P                SP+  ++  II+ L K   +D A  +F  M
Sbjct: 226 KAYSLFDAMLDRGP----------------SPDVVTYSSIISALSKTQAMDKATQVFTRM 269

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G M +  +Y +L+ G C+S + +E+  + ++M   G +P   T  ++   LC+    
Sbjct: 270 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329

Query: 411 VGALNLVRKMRVQGHEP-WVKHNTLL---------------------------------- 435
             A  +   +  +GH+P    + TLL                                  
Sbjct: 330 TEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMI 389

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +    KH K  EA    ++M Q+G  PDIV Y   +  L    RVD AL  F  + + G 
Sbjct: 390 MGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGL 449

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++V +  +I GLC   +  + E+L  EMI +G+      +N ++   CK G + +A  
Sbjct: 450 APNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKN 509

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M+ +    P+  TY TLIDG C+ G+ D+A+ L   M   G  P+ +T+  +I G 
Sbjct: 510 LFDLMV-RIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 568

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +  R    L   R M  KG+ P +  +  L+           A E+   M
Sbjct: 569 SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 242/522 (46%), Gaps = 33/522 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGL-CVPN---NYSYNCLLEALCKSCSVDLVEMRL 89
           G +I C   +G ++ A     +V   GL   PN   + S   L  A  ++  +D+V   L
Sbjct: 103 GIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIV---L 159

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW---VDEHVFSILLVAFS 146
           + M + G   D ++ T LL+  C+     +AL + + + DH     +D   ++ ++    
Sbjct: 160 RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLL 219

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           + G++DKA  L + M D     +  T+  +I    K   +DKA Q+F +M K+G   D  
Sbjct: 220 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 279

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           MY  ++ G C + + + A+ ++ +M   G+ PD    + L+      G+ T   ++I++ 
Sbjct: 280 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST-EARKIFDS 338

Query: 267 ---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-----GEPIADVGV-------- 310
              R     +    +++    + G++ + ++LL  M+K     G  I ++ +        
Sbjct: 339 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 398

Query: 311 --EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
             E L++F    +  ++P+  ++  +++ L   G++D ALS F  +   G   N+ ++  
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI GLC  ++ ++  EL  EM + G        N++   LC++  V+ A NL   M   G
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIG 518

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            EP       LI   C  GK  EA + L  MV  G  P  V Y+  I G     R++  L
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGL 578

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
            L R++   G  P +V Y +++ GL +A R   A++L+  MI
Sbjct: 579 TLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 152/584 (26%), Positives = 254/584 (43%), Gaps = 62/584 (10%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++R    +G + EA  +   ++ +GL  P++ + NC+LE   +S  +D  E    EM   
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLS-PSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  +   ++      G+  +A    + +I  G++ D    +++L A  + G V++A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
                +M D   + N   F  LI G  KK  + +A ++ ++M ++G+  +   +  +I G
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK    E A +L+                           L L+  +I++  +V+T T 
Sbjct: 355 LCKRGWTEKAFRLF---------------------------LKLVRSDIYKP-NVHTYT- 385

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTSSFDII 330
                                  +MI G    D      M+F    +  + PN +++  +
Sbjct: 386 -----------------------SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 422

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN   K G  D A  L   M   G   N++ YN +ID LC  +R  E+YELL +    G 
Sbjct: 423 INGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGL 482

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +    T   + +  C++ D+  AL    +M   G E  ++ N +LI   C+  K  E+ R
Sbjct: 483 EADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 542

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               +V  G +P    Y++ I G       DLAL+ F ++  HGC PD   Y  +ISGLC
Sbjct: 543 LFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLC 602

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   V EA  L+  MI +GL P   T   L   +CK  +   AM+ L  + +K      +
Sbjct: 603 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLW----I 658

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            T  TL+  LC   +   A + + ++ EK  + +R+T  A  T 
Sbjct: 659 RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 702



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 227/536 (42%), Gaps = 86/536 (16%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
             V   +L  FS+ G +++A  ++  M +  +  +  T   ++   ++   +D A  +FD
Sbjct: 170 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFD 229

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M+  G   D++ + +++ G  ++ +++ A +  S M   G  PD               
Sbjct: 230 EMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPD--------------- 274

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                C  I+  L  NG +++A    + MI      D+G +   
Sbjct: 275 ------------------NATCTLILSALCENGLVNRAIWYFRKMI------DLGFK--- 307

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  +F  +I+ L K G +  A  +  EM + G   NV+ +  LIDGLC    
Sbjct: 308 -------PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 360

Query: 375 LEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            E+++ L  ++  S  +KP   T  SM    C+   +  A  L  +M+ QG  P V   T
Sbjct: 361 TEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 420

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK G    A+  +  M  EGF P+I  Y+A I  L    R   A EL     + 
Sbjct: 421 TLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSC 480

Query: 494 GCCPDVVAY-----------------------------------NIIISGLCKAQRVAEA 518
           G   D V Y                                   NI+I+  C+ +++ E+
Sbjct: 481 GLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 540

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           E LF  +++ GL+P+  TY  +I+G+CK G+ D A+     M ++    PD  TY +LI 
Sbjct: 541 ERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNM-KRHGCVPDSFTYGSLIS 599

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           GLC     D+A  L+  M ++G +P  +T + L    CK +   +A++    + +K
Sbjct: 600 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKK 655



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 218/483 (45%), Gaps = 58/483 (12%)

Query: 241 EILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           E++  ++ + S+ G L   V  +   +++ ++  ++  N ++ I + +G ID A N+   
Sbjct: 171 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDE 230

Query: 299 M-IKGEPIADVGVEML-------------------MIFKGTVSPNTSSFDIIINTLLKDG 338
           M ++G        +++                   MI +G + P+ ++  +I++ L ++G
Sbjct: 231 MSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFI-PDNATCTLILSALCENG 289

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            ++ A+  FR+M  +G   N+  + +LIDGLC    +++++E+L EM  +G+KP  +T  
Sbjct: 290 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 349

Query: 399 SMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           ++   LC+R     A  L  K+ R   ++P V   T +I   CK  K   A    + M +
Sbjct: 350 ALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 409

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  P++  Y+  I G       D A EL   +   G  P++  YN +I  LCK  R  E
Sbjct: 410 QGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPE 469

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE--------------- 562
           A +L N+  + GL     TY +LI   CK  +I QA+    RM +               
Sbjct: 470 AYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIA 529

Query: 563 --------KESGS-----------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
                   KES             P   TYT++I G C  G  D A+  ++ M+  GC P
Sbjct: 530 AFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVP 589

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +  T+ +LI+GLCK      A   +  M ++G+ P     V L   +    +   A  VL
Sbjct: 590 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVL 649

Query: 664 KEM 666
           + +
Sbjct: 650 EPL 652



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 227/544 (41%), Gaps = 56/544 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GL++ A  +FD++   G+C P++ S+  ++    +   +   +  L  M   G+  D  T
Sbjct: 219 GLIDYAENVFDEMSVRGVC-PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNAT 277

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T +L   C +G  ++A+  F ++ID G+    + F+ L+    K G + +A E++E M 
Sbjct: 278 CTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 337

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQL 221
               + N  T   LI G  K+   +KA +LF K+ +S  +  +   Y  +IGG CK  +L
Sbjct: 338 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKL 397

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A  L+S MK  G+ P                             +VNT T L N   +
Sbjct: 398 NRAEMLFSRMKEQGLFP-----------------------------NVNTYTTLINGHCK 428

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G+ D+AY L+  M       D G            PN  +++ +I++L K  +  
Sbjct: 429 A----GNFDRAYELMNLM------DDEGFR----------PNIYTYNAVIDSLCKKSRAP 468

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L  +    G   +   Y  LI   C  + ++++      M ++GF+      N + 
Sbjct: 469 EAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILI 528

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              CR++ +  +  L + +   G  P  +  T +I   CK G    A ++  +M + G +
Sbjct: 529 AAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCV 588

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD   Y + I GL     VD A +L+  +   G  P  V    +    CK    A A  +
Sbjct: 589 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIV 648

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
              +  K  I +V T   L+   C    +  A L   ++LEK+S S D +T         
Sbjct: 649 LEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDS-SADRVTLAAFTTACS 704

Query: 582 IAGR 585
            +G+
Sbjct: 705 ESGK 708



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 4/192 (2%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L+ A C+   +   E   + +   G    K T T ++  YC  G FD AL  F+ +  
Sbjct: 525 NILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           HG V D   +  L+    K   VD+AC+L E M D  +   E T   L + + K++    
Sbjct: 585 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAS 644

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+ + + + K  +         ++  LC  K++ +A   + ++     + D   L+   T
Sbjct: 645 AMIVLEPLDKKLWIRTVR---TLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 701

Query: 249 SCSDEGELTLLV 260
           +CS+ G+  L+ 
Sbjct: 702 ACSESGKNNLVA 713


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 219/453 (48%), Gaps = 64/453 (14%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           NE TF   I  F +   +D+A+QL D+M + G   D  +Y  +I G  +   ++ AL L 
Sbjct: 41  NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 100

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           + M           L K  T C +     L + E WED                      
Sbjct: 101 NTM-----------LCKPNTVCYNAALKGLCIAERWED---------------------- 127

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                        GE +A+      M+ KG  SPN ++F ++I++L ++  +D A+ +  
Sbjct: 128 ------------IGELMAE------MVRKG-CSPNEATFSMLISSLCQNNLVDSAVEVLE 168

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M + GC  +   YN +I+ L    R++++  LL  M     KP     N++ +  CR +
Sbjct: 169 QMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAE 225

Query: 409 DVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
               A  L+ +M  +   P ++    +LI  LC++G    A +    M +    PDIV Y
Sbjct: 226 RWHDASELIAQM-FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTY 284

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S+ + G  +   V++A++LFR +    C PD+ +YN ++ GLC+A R  +A +L  EM+ 
Sbjct: 285 SSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVG 341

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           K   P+  T+N+LIN  C+ G +D+A+  L +M    S +PD+ TY  LI+G    GR D
Sbjct: 342 KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPDIFTYNALINGFSEQGRLD 400

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           DA+ L + M    C P+ I++ + + GLC+ +R
Sbjct: 401 DALKLLSTM---SCKPDAISYNSTLKGLCRAER 430



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 228/477 (47%), Gaps = 29/477 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ Y+YN +L+ LC +   +  E  + EM       ++ T    ++ +C +G  D+A+ 
Sbjct: 4   APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + +++  +G   D  ++S L+  FS+ G VD+A +L+  M     + N   +   + G  
Sbjct: 64  LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLC 120

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R +   +L  +M + G + + A + ++I  LC+N  ++ A+++  +M+  G  PD  
Sbjct: 121 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 180

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMI 300
             + +I S S+ G +   +      R +N+M    +++             +N +L+   
Sbjct: 181 NYNIIINSLSERGRVDDAL------RLLNSMVCKPDAL------------GFNAVLKGFC 222

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           + E   D    +  +F+        +F+I+I+ L ++G ++ A  +F +M +  C  ++ 
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y++L++G      +E + +L R M     KP  F+ N++ + LCR      A  L+ +M
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 339

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +   P      +LI  LC+ G    A   L  M   G  PDI  Y+A I G  +  R+
Sbjct: 340 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 399

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           D AL+L   +    C PD ++YN  + GLC+A+R  +AE+L  EM+     P+  T+
Sbjct: 400 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 26/371 (7%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +R    NG +D+A  LL  M +     DV +                +  +IN   + G 
Sbjct: 49  IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI----------------YSTLINGFSEQGH 92

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D AL L   M    C  N   YN  + GLC + R E+  EL+ EM   G  P   T + 
Sbjct: 93  VDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 149

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LC+   V  A+ ++ +M   G EP   +  ++I  L + G+  +A R L  MV + 
Sbjct: 150 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK- 208

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             PD + ++A + G    +R   A EL   +    C    + +NI+I  LC+   V  A 
Sbjct: 209 --PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYAT 266

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +F +M      P + TY+ L+NG+ + G ++ A+     M  K    PD+ +Y  ++ G
Sbjct: 267 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK----PDIFSYNAVLKG 322

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC A R +DA  L  EM  K C PN +TF  LI  LC+      A+     M   G  PD
Sbjct: 323 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 382

Query: 640 MFVFVALISAF 650
           +F + ALI+ F
Sbjct: 383 IFTYNALINGF 393



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 199/442 (45%), Gaps = 27/442 (6%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN  ++   + + C++  +D     L +M  YG   D    + L+  +   G  D+AL
Sbjct: 38  CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 97

Query: 122 SVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            + N ++     V  +     L    +W ++    EL+  M       NE TF +LI   
Sbjct: 98  DLLNTMLCKPNTVCYNAALKGLCIAERWEDIG---ELMAEMVRKGCSPNEATFSMLISSL 154

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + + VD A+++ ++M K G   D   Y++II  L +  +++ AL+L + M        F
Sbjct: 155 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGF 214

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
             + K         + + L+ +++ D D   + +  N ++ +L  NG ++ A  + + M 
Sbjct: 215 NAVLKGFCRAERWHDASELIAQMFRD-DCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                   +P+  ++  ++N   + G +++A+ LFR M    C  ++F
Sbjct: 274 RYR----------------CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIF 314

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN ++ GLC + R E++ EL+ EM      P   T N +   LC++  V  A+ ++ +M
Sbjct: 315 SYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 374

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P +     LI    + G+  +A + L+ M  +   PD + Y++ + GL   +R 
Sbjct: 375 PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERW 431

Query: 481 DLALELFRDICAHGCCPDVVAY 502
             A EL  ++  + C P+ V +
Sbjct: 432 QDAEELVAEMLRNKCTPNEVTF 453



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 55/431 (12%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG--------------------- 60
           +++RC  +       IR     GL++ A  L DQ+ R G                     
Sbjct: 34  IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 93

Query: 61  ----------LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
                     LC PN   YN  L+ LC +   + +   + EM   G   ++ T + L+  
Sbjct: 94  DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 153

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
            C +   D A+ V  ++  +G   + V ++I++ + S+ G VD A  L+  M     + +
Sbjct: 154 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 210

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
              F  ++ GF +  R   A +L  +M +         ++++I  LC+N  +  A Q++ 
Sbjct: 211 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 270

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M     TPD    S L+   S++G + + ++                 + R +     I
Sbjct: 271 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ-----------------LFRSMPCKPDI 313

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
                +L+ + +     D G  +  +      PN  +F+I+IN+L + G +D A+ +  +
Sbjct: 314 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 373

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   ++F YN LI+G     RL+++ +LL  M     KP   + NS  + LCR + 
Sbjct: 374 MPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAER 430

Query: 410 VVGALNLVRKM 420
              A  LV +M
Sbjct: 431 WQDAEELVAEM 441



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 35/357 (9%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+   L  ++ R+G C PN  +++ L+ +LC++  VD     L++M+ YG   D      
Sbjct: 126 EDIGELMAEMVRKG-CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 184

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM--DDC 164
           ++      G+ D AL + N ++     D   F+ +L  F +      A ELI +M  DDC
Sbjct: 185 IINSLSERGRVDDALRLLNSMVCKP--DALGFNAVLKGFCRAERWHDASELIAQMFRDDC 242

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
              L E TF +LI    +   V+ A Q+F++M +     D   Y  ++ G  +   +E+A
Sbjct: 243 --PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA 300

Query: 225 LQLYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +QL+  M      PD      +L  L  +   E    L+ + + +D   N +T   N ++
Sbjct: 301 IQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF--NILI 355

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G +D+A  +L+ M       + G           +P+  +++ +IN   + G+L
Sbjct: 356 NSLCQKGLVDRAIEVLEQM------PNYG----------STPDIFTYNALINGFSEQGRL 399

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           D AL L   M+   C  +   YN+ + GLC + R +++ EL+ EM  +   P   T 
Sbjct: 400 DDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 8/234 (3%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RA R      L   + +  C +       LI  L   GLV  A  +F+Q+ R   C P+ 
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYR-CTPDI 281

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +Y+ LL    +     LVE+ ++  +      D ++   +L+  C + +++ A  +  E
Sbjct: 282 VTYSSLLNGFSEQ---GLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 338

Query: 127 IIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++      +E  F+IL+ +  + G VD+A E++E+M +     +  T+  LI+GF ++ R
Sbjct: 339 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 398

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +D AL+L   M+      DA  Y+  + GLC+ ++ + A +L +EM  +  TP+
Sbjct: 399 LDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPN 449



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 11/232 (4%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREG 60
           S+  R R    LR+L   V K      P ALGF  +++         +A+ L  Q+ R+ 
Sbjct: 188 SLSERGRVDDALRLLNSMVCK------PDALGFNAVLKGFCRAERWHDASELIAQMFRDD 241

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C     ++N L++ LC++  V+      ++M  Y    D  T + LL  +   G  + A
Sbjct: 242 -CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA 300

Query: 121 LSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           + +F  +      D   ++ +L    +    + A ELI  M   +   NE TF +LI+  
Sbjct: 301 IQLFRSMPCKP--DIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 358

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
            +K  VD+A+++ ++M   G   D   Y+ +I G  +  +L+ AL+L S M 
Sbjct: 359 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS 410


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 220/481 (45%), Gaps = 37/481 (7%)

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L    + G++++A  L+E M              LI       R  +A ++      +  
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AAC 120

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLL 259
             D   Y+ ++ G C   QL+ A +L ++M    + PD    + LI      G     L+
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 260 VKEIWEDR----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLM 314
           V +    R    DV T T+L  +  +         QA  LL  M  KG            
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCK----RSGYKQAMKLLDEMRAKG------------ 221

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                 +P+  ++++++N + ++G++D A+   + +   GC  N   YN ++ GLC + R
Sbjct: 222 -----CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E++ +L+ EM + G+ P   T N +   LCRR  V  A+ ++ ++   G  P       
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           ++   CK  K   A  F+  MV  G  PDIV Y+  +  L     VD A+EL   +   G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P +++YN +I GL KA +  EA +L NEM+TKGL P + TY+ + +G C+   I++A+
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               + ++     P+ + Y  ++ GLC      +AI L+  M   GC PN  T+  LI G
Sbjct: 457 RAFCK-VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515

Query: 615 L 615
           L
Sbjct: 516 L 516



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 195/411 (47%), Gaps = 58/411 (14%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N  +R LV  G +++A  L+++M   EP A  G    +I K   S  T+    ++     
Sbjct: 63  NDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL----- 117

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
                             C  +V  YN ++ G C + +L+ +  L+ +M     +P  +T
Sbjct: 118 ----------------AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYT 158

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++ R LC R     AL ++  M  +G  P V   T+L++  CK     +A + L +M 
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +G  PDI+ Y+  + G+    RVD A+E  + + +HGC P+ V+YNI++ GLC A+R  
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM---------------------- 554
           +AE L  EM  KG  P+V T+N+LI+  C+ G ++ AM                      
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 555 --LCLSRMLEKESG----------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              C  + +++              PD+++Y TL+  LC  G  D A+ L +++++KGC 
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P  I++  +I GL K  + + AL     M  KG++PD+  +  + S    E
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 233/492 (47%), Gaps = 27/492 (5%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD--VIIGGLCKNKQLEMALQLYSEMKGS 234
           + G V++  +++AL+L + M  SG    AA      +I  LC + +   A ++ +  +  
Sbjct: 66  LRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE-- 121

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
              PD    + ++      G+L    + +  D  +   +   N+++R L   G    A  
Sbjct: 122 ---PDVMAYNAMVAGYCVTGQLDA-ARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +L  M++               +G V P+  ++ I++    K      A+ L  EM   G
Sbjct: 178 VLDDMLR---------------RGCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
           C  ++  YN +++G+C   R++++ E L+ +   G +P   + N + + LC  +    A 
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+ +M  +G+ P V    +LI  LC+ G    A   L  + + G  P+ + Y+  +   
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAF 341

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              K++D A+     + + GC PD+V+YN +++ LC+   V  A +L +++  KG  P +
Sbjct: 342 CKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 401

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            +YN +I+G  K+G   +A+  L+ M+ K    PD+ITY+T+  GLC   R ++AI  + 
Sbjct: 402 ISYNTVIDGLTKAGKTKEALELLNEMVTK-GLQPDIITYSTISSGLCREDRIEEAIRAFC 460

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           ++++ G  PN + + A++ GLCK      A+  F  M   G  P+   +  LI     E 
Sbjct: 461 KVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEG 520

Query: 655 NPPLAFEVLKEM 666
               A E+L E+
Sbjct: 521 LVKEARELLGEL 532



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 214/478 (44%), Gaps = 29/478 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C SG+  +A  V          D   ++ ++  +   G++D A  L+  M    +
Sbjct: 100 LIKKLCASGRTAEARRVLAAC----EPDVMAYNAMVAGYCVTGQLDAARRLVADMP---M 152

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+  LI G   + R   AL + D M + G   D   Y +++   CK    + A++
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM+  G  PD    + ++     EG +   ++                  ++ L S+
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIE-----------------FLKSLPSH 255

Query: 287 GSIDQ--AYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G      +YN+ L+ +   E   D    M  + +    PN  +F+++I+ L + G ++ A
Sbjct: 256 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPA 315

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           + +  ++ + GC  N   YN ++   C   +++ +   +  M   G  P   + N++   
Sbjct: 316 MEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LCR  +V  A+ L+ +++ +G  P +     +I  L K GK  EA   L +MV +G  PD
Sbjct: 376 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ YS    GL    R++ A+  F  +   G  P+ V YN I+ GLCK +    A DLF 
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT--LIDG 579
            MI+ G +P+ +TY +LI G    G + +A   L  +  +   S  +I      L+DG
Sbjct: 496 YMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLDG 553



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 221/504 (43%), Gaps = 59/504 (11%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +PG    LI+ L + G   EA  +         C P+  +YN ++   C +  +D     
Sbjct: 93  APGPCAALIKKLCASGRTAEARRVL------AACEPDVMAYNAMVAGYCVTGQLDAAR-- 144

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
            + + D     D YT   L++  C  G+   AL V ++++  G V + V ++ILL A  K
Sbjct: 145 -RLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCK 203

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
                +A +L++ M       +  T+ V+++G  ++ RVD A++    +   G   +   
Sbjct: 204 RSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVS 263

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y++++ GLC  ++ E A +L +EM   G  P+    + LI+                   
Sbjct: 264 YNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS------------------- 304

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                          L   G ++ A  +L                  I K   +PN+ S+
Sbjct: 305 --------------FLCRRGLVEPAMEVLD----------------QIPKYGCTPNSLSY 334

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + I++   K  K+D A++    M   GC  ++  YN L+  LC    ++ + ELL ++++
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P   + N++   L +      AL L+ +M  +G +P +   + +   LC+  +  E
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    +   G  P+ V Y+A + GL   +    A++LF  + ++GC P+   Y I+I 
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514

Query: 508 GLCKAQRVAEAEDLFNEMITKGLI 531
           GL     V EA +L  E+ ++G++
Sbjct: 515 GLTYEGLVKEARELLGELCSRGVV 538



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 124/259 (47%), Gaps = 13/259 (5%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN--TLLIKELCKHGKAMEAF 449
           P     N   R L RR D+  AL LV  M   G EP         LIK+LC  G+  EA 
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R L         PD++ Y+A + G     ++D A  L  D+      PD   YN +I GL
Sbjct: 115 RVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGL 166

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C   R   A  + ++M+ +G +P V TY +L+   CK     QAM  L  M  K   +PD
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK-GCAPD 225

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           +ITY  +++G+C  GR DDAI     +   GC PN +++  ++ GLC  +R   A     
Sbjct: 226 IITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 285

Query: 630 MMKEKGMKPDMFVFVALIS 648
            M +KG  P++  F  LIS
Sbjct: 286 EMSQKGYPPNVVTFNMLIS 304



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 191/413 (46%), Gaps = 23/413 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P++Y+YN L+  LC         + L +M   G   D  T T LL+  C    + +A+ +
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+   G   + + +++++    + G VD A E ++ +       N  ++ +++ G   
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R + A +L  +M++ G+  +   ++++I  LC+   +E A+++  ++   G TP+   
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN--- 330

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--AYN-LLQAM 299
                 S S    L    K+   DR +        + + ++VS G      +YN LL A+
Sbjct: 331 ------SLSYNPILHAFCKQKKMDRAM--------AFVELMVSRGCYPDIVSYNTLLTAL 376

Query: 300 IKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
            +G  + D  VE+L   K    +P   S++ +I+ L K GK   AL L  EM   G   +
Sbjct: 377 CRGGEV-DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +  Y+ +  GLC  +R+EE+     ++++ G +P     N++   LC+R++   A++L  
Sbjct: 436 IITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            M   G  P     T+LI+ L   G   EA   L ++   G +   +   AAI
Sbjct: 496 YMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAI 548



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 14/259 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L   GLVE A  + DQ+ + G C PN+ SYN +L A CK   +D     ++ M  
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYG-CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 359

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   D  +   LL   C  G+ D A+ + +++ D G     + ++ ++   +K G+  +
Sbjct: 360 RGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKE 419

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL+  M    ++ +  T+  +  G  ++ R+++A++ F K+   G   +  +Y+ I+ 
Sbjct: 420 ALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILL 479

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK ++   A+ L+  M  +G  P+    + LI   + EG    LVKE  E        
Sbjct: 480 GLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEG----LVKEARE-------- 527

Query: 274 LLCNSIMRILVSNGSIDQA 292
           LL     R +VS G I++A
Sbjct: 528 LLGELCSRGVVSKGLINKA 546



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 23/335 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A      +   G C PN  SYN +L+ LC +   +  E  + EM   G+  +  T
Sbjct: 240 GRVDDAIEFLKSLPSHG-CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+   C  G  + A+ V ++I  +G     + ++ +L AF K  ++D+A   +E M 
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +  ++  L+    +   VD A++L  ++   G       Y+ +I GL K  + +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW--EDRDVNTMTLLCNSIM 280
            AL+L +EM   G+ PD    S + +    E  +   ++     +D  +   T+L N+I+
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L        A +L                + MI  G + PN S++ I+I  L  +G +
Sbjct: 479 LGLCKRRETHNAIDLF---------------IYMISNGCM-PNESTYTILIEGLTYEGLV 522

Query: 341 DLALSLFREMTQIGCMQNVFLYN---NLIDGLCNS 372
             A  L  E+   G +    +      L+DG  ++
Sbjct: 523 KEARELLGELCSRGVVSKGLINKAAIRLLDGTTHT 557


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 226/488 (46%), Gaps = 22/488 (4%)

Query: 167 RLNEKT---FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           R++ KT   F +L+  + +  + ++AL+ F  + + GF  +    + ++    K  + +M
Sbjct: 140 RVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQM 199

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
           A  LY+EM    I       + +I     EG+L    + I   E   V    +  N+I+ 
Sbjct: 200 AWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIH 259

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G   +A  + Q M       D G+E          P+  +++  I+ L K+G+L+
Sbjct: 260 GHCLRGKFQRARVIFQTM------KDKGLE----------PDCYTYNSFISGLCKEGRLE 303

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L  +M + G + N   YN LIDG CN   L+++Y    EM   G   +  T N   
Sbjct: 304 EASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFI 363

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L     +  A N++++MR +G  P    + +LI   C+ G A  AF  L +MV +G  
Sbjct: 364 HALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQ 423

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P +V Y++ I  L    R+  A  LF  I   G  PD++ +N +I G C    +  A  L
Sbjct: 424 PTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQL 483

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             EM    ++P   TYN L+ G+C+ G +++A   L  M ++    PD I+Y TLI G  
Sbjct: 484 LKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM-KRRGIKPDHISYNTLISGYS 542

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G   DA  + +EM   G  P  +T+ ALI GLCK      A    + M  KG+ PD  
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602

Query: 642 VFVALISA 649
            ++++I A
Sbjct: 603 TYLSIIEA 610



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 224/514 (43%), Gaps = 51/514 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L++ YC   + ++AL  F  I + G+V      + +L  F K      A  L   M   N
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           IR +  TF ++I+   K+ ++ KA +    M   G   +   Y+ II G C   + + A 
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            ++  MK  G+ PD    +  I+    EG L                             
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRL----------------------------- 302

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
               ++A  L+  M++G               G V PN  +++ +I+     G LD A +
Sbjct: 303 ----EEASGLICKMLEG---------------GLV-PNAVTYNALIDGYCNKGDLDKAYA 342

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
              EM   G M ++  YN  I  L    R+ ++  +++EM E G  P   T N +    C
Sbjct: 343 YRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYC 402

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           R  D   A  L+ +M  +G +P +   T LI  L K  +  EA    + + QEG LPDI+
Sbjct: 403 RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII 462

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            ++A I G      +D A +L +++      PD + YN ++ G C+  +V EA  L +EM
Sbjct: 463 VFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM 522

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G+ P   +YN LI+G+ K G++  A      M+      P ++TY  LI GLC    
Sbjct: 523 KRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM-TTGFDPTILTYNALIQGLCKNQE 581

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            + A  L  EM  KG  P+  T++++I  +   D
Sbjct: 582 GEHAEELLKEMVSKGITPDDSTYLSIIEAMETVD 615



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 216/468 (46%), Gaps = 21/468 (4%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---SCSDEGELTL 258
           A    ++D+++   C+ K+   AL+ +  +K  G  P+ E  +++++     +      +
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L  E++   ++ +     N ++ +L   G + +A   +  M           E L     
Sbjct: 203 LYAEMFR-MNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM-----------ETL----- 245

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            V PN  +++ II+     GK   A  +F+ M   G   + + YN+ I GLC   RLEE+
Sbjct: 246 GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             L+ +M E G  P   T N++    C + D+  A     +M  +G    +    L I  
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           L   G+  +A   + +M ++G +PD V ++  I G         A  L  ++   G  P 
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           +V Y  +I  L K  R+ EA+ LF+++  +GL+P +  +N LI+G C +GNID+A   L 
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M +     PD ITY TL+ G C  G+ ++A  L +EM+ +G  P+ I++  LI+G  K 
Sbjct: 486 EM-DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              + A      M   G  P +  + ALI           A E+LKEM
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEM 592



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 198/445 (44%), Gaps = 52/445 (11%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           Y++N ++  LCK   +   +  +  M+  G   +  T   ++  +C  G+F +A  +F  
Sbjct: 217 YTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQT 276

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           + D G   D + ++  +    K G +++A  LI +M +  +  N  T+  LI G+  K  
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +DKA    D+M   G  +    Y++ I  L    ++  A  +  EM+  G+ P       
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP------- 389

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                                 D  T  +L N   R     G   +A+ LL  M+     
Sbjct: 390 ----------------------DAVTHNILINGYCRC----GDAKRAFGLLDEMVG---- 419

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                      KG + P   ++  +I  L K  ++  A +LF ++ Q G + ++ ++N L
Sbjct: 420 -----------KG-IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           IDG C +  ++ +++LL+EM+     P   T N++ +  CR   V  A  L+ +M+ +G 
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 426 EP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
           +P  + +NT LI    K G   +AFR   +M+  GF P I+ Y+A I GL   +  + A 
Sbjct: 528 KPDHISYNT-LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586

Query: 485 ELFRDICAHGCCPDVVAYNIIISGL 509
           EL +++ + G  PD   Y  II  +
Sbjct: 587 ELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 192/431 (44%), Gaps = 22/431 (5%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S+  +  R     VL  ++ +     S      +I  L   G +++A      ++  G
Sbjct: 187 MLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG 246

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  PN  +YN ++   C         +  + M+D G   D YT    +   C  G+ ++A
Sbjct: 247 V-KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +  ++++ G V   V ++ L+  +   G++DKA    + M    I  +  T+ + IH 
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              + R+  A  +  +M + G   DA  ++++I G C+    + A  L  EM G GI P 
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               + LI          E   L  +I ++  +  + ++ N+++    +NG+ID+A+ LL
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDI-IVFNALIDGHCANGNIDRAFQLL 484

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + M   +                V P+  +++ ++    ++GK++ A  L  EM + G  
Sbjct: 485 KEMDNMK----------------VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   YN LI G      +++++ +  EM  +GF PT  T N++ + LC+ Q+   A  L
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588

Query: 417 VRKMRVQGHEP 427
           +++M  +G  P
Sbjct: 589 LKEMVSKGITP 599



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 170/373 (45%), Gaps = 22/373 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  + A ++F  +K +GL  P+ Y+YN  +  LCK   ++     + +M + G   +  T
Sbjct: 265 GKFQRARVIFQTMKDKGL-EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  YCN G  DKA +  +E+I  G +   V +++ + A    G +  A  +I+ M 
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  +  T  +LI+G+ +     +A  L D+M   G       Y  +I  L K  +++
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSI 279
            A  L+S+++  G+ PD  + + LI      G +     L+KE+ ++  V    +  N++
Sbjct: 444 EADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM-DNMKVLPDEITYNTL 502

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M+     G +++A  LL  M +               +G + P+  S++ +I+   K G 
Sbjct: 503 MQGYCREGKVEEARQLLDEMKR---------------RG-IKPDHISYNTLISGYSKRGD 546

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +  A  +  EM   G    +  YN LI GLC +   E + ELL+EM   G  P   T  S
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606

Query: 400 MFRCLCRRQDVVG 412
           +   +    D+ G
Sbjct: 607 IIEAMETVDDLEG 619



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 4/215 (1%)

Query: 28  MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           M P A+    LI      G  + A  L D++  +G+  P   +Y  L+  L K   +   
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI-QPTLVTYTSLIYVLGKRNRMKEA 445

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
           +    ++Q  G   D      L+  +C +G  D+A  +  E+ +   + DE  ++ L+  
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + + G+V++A +L++ M    I+ +  ++  LI G+ K+  +  A ++ D+M  +GF   
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              Y+ +I GLCKN++ E A +L  EM   GITPD
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 167/638 (26%), Positives = 282/638 (44%), Gaps = 60/638 (9%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N  L AL +  S+   +     M   G   D  T   L++      +  +AL V +  I+
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVD 187
            G   D  ++S+ + A  K  ++  A  L+  M +  + + +++T+  +I   VK+  +D
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            A++L D+M   G + +      +I G CKN  L  AL L+ +M+  G +P+    S LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                 GE+   + E ++              M +L    S+   + ++Q  +KG+    
Sbjct: 382 EWFRKNGEMEKAL-EFYKK-------------MEVLGLTPSVFHVHTIIQGWLKGQKHE- 426

Query: 308 VGVEMLMIFKGTVSPNTSSF---DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
              E L +F  +     ++    + I++ L K GK D A  L  +M   G   NV  YNN
Sbjct: 427 ---EALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           ++ G C    ++ +  +   + E G KP ++T + +     R  D   AL +V  M    
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-------------------------- 458
            E        +I  LCK G+  +A   L +M++E                          
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603

Query: 459 ----------GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                     G  P+++ Y++ + GL    R+D ALE+  ++   G   D+ AY  +I G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            CK   +  A  LF+E++ +GL PS   YN LI+G+   GN+  A+    +ML K+    
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-KDGLRC 722

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D+ TYTTLIDGL   G    A  L+ EM+  G  P+ I +  ++ GL K  +    +  F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             MK+  + P++ ++ A+I+    E N   AF +  EM
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 277/591 (46%), Gaps = 29/591 (4%)

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILL 142
           LV   +   + +G+  +      LL  Y    Q D A+ + N++++   +    + +  L
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
            A  +   + +A EL  RM    +  +  T  +L+   +++ +  +AL++  +  + G  
Sbjct: 206 SALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE 265

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDFEILSKLITSCSDEGELTLLVK 261
            D+ +Y + +   CK   L MA  L  EMK   +  P  E  + +I +   +G +   ++
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325

Query: 262 ---EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
              E+  D  ++   +   S++     N  +  A  L   M K  P              
Sbjct: 326 LKDEMLSD-GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP-------------- 370

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
             SPN+ +F ++I    K+G+++ AL  +++M  +G   +VF  + +I G     + EE+
Sbjct: 371 --SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIK 437
            +L  E  E+G     F  N++   LC++     A  L+ KM  +G  P  V +N +++ 
Sbjct: 429 LKLFDESFETGLANV-FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487

Query: 438 ELCKHGKAMEAFRFL-TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             C+  K M+  R + ++++++G  P+   YS  I G         ALE+   + +    
Sbjct: 488 H-CRQ-KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMIT-KGLIPSVATYNLLINGWCKSGNIDQAML 555
            + V Y  II+GLCK  + ++A +L   MI  K L  S  +YN +I+G+ K G +D A+ 
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M      SP+VITYT+L++GLC   R D A+ + +EM+ KG   +   + ALI G 
Sbjct: 606 AYEEMC-GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK     +A   F  + E+G+ P   ++ +LIS F +  N   A ++ K+M
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 260/569 (45%), Gaps = 55/569 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK-EMQDYGWGYDKYTLTPL 107
           AN L  ++K + LCVP+  +Y  ++ A  K  ++D   +RLK EM   G   +    T L
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA-IRLKDEMLSDGISMNVVAATSL 345

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +  +C +     AL +F+++   G     V FS+L+  F K GE++KA E  ++M+   +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFD-------------------------------- 194
             +      +I G++K  + ++AL+LFD                                
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465

Query: 195 --KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC-- 250
             KM   G   +   Y+ ++ G C+ K +++A  ++S +   G+ P+    S LI  C  
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           + + +  L V       ++    ++  +I+  L   G   +A  LL  MI+         
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE--------- 576

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 +  +  +  S++ II+   K+G++D A++ + EM   G   NV  Y +L++GLC
Sbjct: 577 ------EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +NR++++ E+  EM+  G K       ++    C+R ++  A  L  ++  +G  P   
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI      G  + A      M+++G   D+  Y+  I GL+    + LA EL+ ++
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            A G  PD + Y +I++GL K  +  +   +F EM    + P+V  YN +I G  + GN+
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           D+A      ML+K    PD  T+  L+ G
Sbjct: 811 DEAFRLHDEMLDK-GILPDGATFDILVSG 838



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 191/443 (43%), Gaps = 70/443 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +EA  L  +++  G+  PN  SYN ++   C+  ++DL  +    + + G   + YT
Sbjct: 457 GKTDEATELLSKMESRGIG-PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L+     +     AL V N +      V+  V+  ++    K G+  KA EL+  M 
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM- 574

Query: 163 DCNIRLNEKTFCV-------LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
                + EK  CV       +I GF K+  +D A+  +++M  +G + +   Y  ++ GL
Sbjct: 575 -----IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTM 272
           CKN +++ AL++  EMK  G+  D      LI      S+    + L  E+ E+  +N  
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPS 688

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
             + NS++    + G++  A +L + M+K     D+G                ++  +I+
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG----------------TYTTLID 732

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            LLKDG L LA  L+ EM  +G + +  +Y  +++GL    +  +  ++  EM+++   P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                N++                     + GH               + G   EAFR  
Sbjct: 793 NVLIYNAV---------------------IAGH--------------YREGNLDEAFRLH 817

Query: 453 TDMVQEGFLPDIVCYSAAIGGLI 475
            +M+ +G LPD   +   + G +
Sbjct: 818 DEMLDKGILPDGATFDILVSGQV 840



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK----SCSVDLVEM 87
           A G LI        +E A+ LF ++  EGL  P+   YN L+           ++DL + 
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLN-PSQPIYNSLISGFRNLGNMVAALDLYKK 714

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFS 146
            LK+    G   D  T T L+      G    A  ++ E+   G V DE ++++++   S
Sbjct: 715 MLKD----GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+  K  ++ E M   N+  N   +  +I G  ++  +D+A +L D+M   G   D A
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830

Query: 207 MYDVIIGGLCKNKQ 220
            +D+++ G   N Q
Sbjct: 831 TFDILVSGQVGNLQ 844


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 217/468 (46%), Gaps = 54/468 (11%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC   +L+ AL+L+  +   G     ++L + ++  +   E  L V ++  DR       
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCGLPADLLVRELSK-AGRAEECLKVVKLMLDRQQLRERH 67

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L N  +  L  +  ID+A +  Q               L  F+G V  NT S++I+IN  
Sbjct: 68  LVNITIDSLCKSDMIDKAESWFQE--------------LKDFRGLV--NTVSYNILINAF 111

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K  ++D A+ LF EM   GC  +   YN LI GLC   RL E+ +    +  SG   + 
Sbjct: 112 CKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASF 171

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +    C+   V  A+ L+ ++  +G          +I  L K GK  EA  F   
Sbjct: 172 ITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNR 231

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD-----------ICA----------- 492
           M ++G  P  V ++  I GL    RV  A E+F             IC+           
Sbjct: 232 MEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGG 291

Query: 493 -------------HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
                         GC P+ V+ NI+I+GLCKA+R+++A ++F E++ +   P V TY+ 
Sbjct: 292 VDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYST 351

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN-EMEE 598
            ++G C++  +DQA   L  +++K  G+PDV+ YT LI GLC  GR D+A  ++  +M  
Sbjct: 352 FMDGLCRAHRVDQARQVLCMLVDK-GGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRA 410

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            GCAPN  T   L+ G     R   A   F+   E+G++PD   F A+
Sbjct: 411 AGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 214/450 (47%), Gaps = 22/450 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L++    +G+ ++ L V   ++D   + E H+ +I + +  K   +DKA    + + D  
Sbjct: 37  LVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFR 96

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
             +N  ++ +LI+ F K  R+D+A+QLF +M   G A   + Y+ +IGGLC+ ++L  A 
Sbjct: 97  GLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQ 156

Query: 226 QLYSEMKGSGITPDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           Q Y  +  SG    F   + L+   C               DR    + LL   + R   
Sbjct: 157 QFYERLLSSGAGASFITYNILVDGFCK-------------ADRVPEAVELLNELVAR--- 200

Query: 285 SNGSIDQA-YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
             G +  A YN ++  + K   I +  +    + K  V P   +F ++I+ L K  ++  
Sbjct: 201 -GGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVAR 259

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  +F    + G   +V + + L+DG C    ++E++ +   M   G  P   + N +  
Sbjct: 260 AKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILIN 319

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+ + +  A  +  ++  +  +P V   +  +  LC+  +  +A + L  +V +G  P
Sbjct: 320 GLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTP 379

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFR-DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           D+V Y+A I GL  + R+D A ++F  D+ A GC P+    N++++G   A R+ EA +L
Sbjct: 380 DVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAREL 439

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNID 551
           F   + +G+ P   T++ + N   K+   D
Sbjct: 440 FQRFVERGVQPDCRTFSAMANNTAKTEGWD 469



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +I I++L K   +D A S F+E+     + N   YN LI+  C + R++E+ +L  EM+ 
Sbjct: 70  NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  T N++   LCR + +  A     ++   G         +L+   CK  +  E
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L ++V  G +     Y+  I  L    ++  A   F  +   G  P  V + ++I 
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GLCKA RVA A+++F   +  G  PSV   + L++G+CK G +D+A      M  +   +
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNR-GCT 308

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+ ++   LI+GLC A R   A  ++ E+ ++   P+ +T+   + GLC+  R   A   
Sbjct: 309 PNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQV 368

Query: 628 FRMMKEKGMKPDMFVFVALISAFLS 652
             M+ +KG  PD+ ++ ALIS   S
Sbjct: 369 LCMLVDKGGTPDVVMYTALISGLCS 393



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 166/371 (44%), Gaps = 43/371 (11%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-EES 388
           I+  L   GKLD AL LF  +   GC     L   L+  L  + R EE  ++++ M +  
Sbjct: 5   IVLCLCHVGKLDEALELFHSLVSDGCGLPADL---LVRELSKAGRAEECLKVVKLMLDRQ 61

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAME 447
             +  H  +N     LC+   +  A +  ++++  +G    V +N +LI   CK  +  E
Sbjct: 62  QLRERHL-VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYN-ILINAFCKTKRIDE 119

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A +   +M   G  P    Y+  IGGL  ++R+  A + +  + + G     + YNI++ 
Sbjct: 120 AIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVD 179

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G CKA RV EA +L NE++ +G + + A YN +I+   K G I +A L  +RM EK+   
Sbjct: 180 GFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRM-EKDGVR 238

Query: 568 PDVITYTTLIDGLCIAGR-----------------------------------PDDAIML 592
           P  +T+T LIDGLC A R                                    D+A  +
Sbjct: 239 PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRI 298

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           +  M  +GC PN ++   LI GLCK  R   A   F  + ++  KPD+  +   +     
Sbjct: 299 FELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCR 358

Query: 653 ELNPPLAFEVL 663
                 A +VL
Sbjct: 359 AHRVDQARQVL 369



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 41/449 (9%)

Query: 35  FLIRCLGSVGLVEE-----ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
            L+R L   G  EE       ML  Q  RE       +  N  +++LCKS  +D  E   
Sbjct: 36  LLVRELSKAGRAEECLKVVKLMLDRQQLRE------RHLVNITIDSLCKSDMIDKAESWF 89

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKW 148
           +E++D+    +  +   L+  +C + + D+A+ +F E+   G       ++ L+    + 
Sbjct: 90  QELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRV 149

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             + +A +  ER+       +  T+ +L+ GF K  RV +A++L +++   G    +A Y
Sbjct: 150 ERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPY 209

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WE 265
           + II  L K  ++  A   ++ M+  G+ P     + LI        +    KEI   + 
Sbjct: 210 NCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVA-RAKEIFFSYL 268

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           +   +   ++C+ +M      G +D+A+ + +               LM  +G  +PN  
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFE---------------LMTNRG-CTPNDV 312

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S +I+IN L K  +L  A  +F E+ +     +V  Y+  +DGLC ++R++++ ++L  +
Sbjct: 313 SCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCML 372

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK-----MRVQGHEPWVKHNTLLIKELC 440
            + G  P      ++   LC     +G L+  RK     MR  G  P      +L+    
Sbjct: 373 VDKGGTPDVVMYTALISGLCS----LGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFG 428

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
             G+  EA       V+ G  PD   +SA
Sbjct: 429 LAGRLDEARELFQRFVERGVQPDCRTFSA 457



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 4/193 (2%)

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
           L  + ++D ALELF  + + GC    +  ++++  L KA R  E   +   M+ +  +  
Sbjct: 9   LCHVGKLDEALELFHSLVSDGC---GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
               N+ I+  CKS  ID+A       L+   G  + ++Y  LI+  C   R D+AI L+
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQE-LKDFRGLVNTVSYNILINAFCKTKRIDEAIQLF 124

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            EM+  GCAP+  T+  LI GLC+ +R   A   +  +   G       +  L+  F   
Sbjct: 125 GEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184

Query: 654 LNPPLAFEVLKEM 666
              P A E+L E+
Sbjct: 185 DRVPEAVELLNEL 197


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/550 (25%), Positives = 251/550 (45%), Gaps = 22/550 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  Y   G   +A   F ++   G     HV++ L+ A++   ++++A   + +M +  
Sbjct: 317 MVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 376

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I ++  T+ +L+ GF K    + A   F +  +   + +A +Y  II   C+   ++ A 
Sbjct: 377 IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAE 436

Query: 226 QLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            L  EM+  GI    +I   ++   T   DE +  LLV E +++  +N   +    ++ +
Sbjct: 437 ALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKC-LLVFERFKECGLNPSVITYGCLINL 495

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G + +A  + + M         G++           N  ++ ++IN  LK      
Sbjct: 496 YAKLGKVSKALEVSKEM------EHAGIKH----------NMKTYSMLINGFLKLKDWAN 539

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A ++F ++ + G   +V LYNN+I   C   +++ +   ++EM++   KPT  T   +  
Sbjct: 540 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 599

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
              R+ ++  AL++   MR+ G  P V     LI  L +  K  +A + L +M   G  P
Sbjct: 600 GFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 659

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   Y+  + G   +     A   F  +   G   DV  Y  ++   CK+ R+  A  + 
Sbjct: 660 NEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVT 719

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  + +  +   YN+LI+GW + G+I +A   + +M ++E   PD+ TYT+ I+    
Sbjct: 720 KEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQM-KREGVQPDIHTYTSFINACSK 778

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG    A     EM+  G  PN  T+  LI G  +   P  AL  F  MK  G+KPD  V
Sbjct: 779 AGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAV 838

Query: 643 FVALISAFLS 652
           +  L+++ LS
Sbjct: 839 YHCLMTSLLS 848



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/538 (22%), Positives = 234/538 (43%), Gaps = 33/538 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           + +++  +++ G++ +A E  E+M    I  +   +  LIH +     +++AL    KM 
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS----CS-D 252
           + G       Y +++ G  K    E A   + E K    + +  I   +I +    C+ D
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           + E   LV+E+ E+                      ID   ++   M+ G  +     + 
Sbjct: 434 KAEA--LVREMEEE---------------------GIDAPIDIYHTMMDGYTMVGDEDKC 470

Query: 313 LMIFKG----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           L++F+      ++P+  ++  +IN   K GK+  AL + +EM   G   N+  Y+ LI+G
Sbjct: 471 LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING 530

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                    ++ +  ++ + G KP     N++    C    +  A+  V++M+ Q H+P 
Sbjct: 531 FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPT 590

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            +    +I    + G+  +A      M   G +P +  Y+A I GL++ ++++ A ++  
Sbjct: 591 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++   G  P+   Y  I+ G        +A   F ++  +GL   V TY  L+   CKSG
Sbjct: 651 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + Q+ L +++ +  ++   +   Y  LIDG    G   +A  L  +M+ +G  P+  T+
Sbjct: 711 RM-QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTY 769

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + I    K    + A      MK  G+KP++  +  LI+ +     P  A    +EM
Sbjct: 770 TSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEM 827



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 210/494 (42%), Gaps = 20/494 (4%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      L+      G  E A+  F + K +   + N   Y  ++ A C+ C++D  E 
Sbjct: 379 MSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSL-NAIIYGNIIYAYCQRCNMDKAEA 437

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y   G  DK L VF    + G     + +  L+  ++
Sbjct: 438 LVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYA 497

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+V KA E+ + M+   I+ N KT+ +LI+GF+K      A  +F+ + K G   D  
Sbjct: 498 KLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVV 557

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+ II   C   +++ A+    EM+     P       +I   + +GE+   +      
Sbjct: 558 LYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL------ 611

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA--MIKGEPIADVGVEMLMIFKGTVSPNT 324
            DV  M  +   I  +   N  I     L++   M K E I D   EM +     VSPN 
Sbjct: 612 -DVFDMMRMSGCIPTVHTYNALI---LGLVEKRKMEKAEQILD---EMTL---AGVSPNE 661

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  I++     G    A + F ++   G   +V+ Y  L+   C S R++ +  + +E
Sbjct: 662 HTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE 721

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M         F  N +     RR D+  A +L+++M+ +G +P +   T  I    K G 
Sbjct: 722 MSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGD 781

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A + + +M   G  P++  Y+  I G       + AL  F ++   G  PD   Y+ 
Sbjct: 782 MQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHC 841

Query: 505 IISGLCKAQRVAEA 518
           +++ L     VA  
Sbjct: 842 LMTSLLSRATVAHG 855



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 17/384 (4%)

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           D+A N L+ +I+ EP  +    ++  F+    P+   + +++N   + G +  A   F +
Sbjct: 279 DKARNGLRKVIETEP--ENWQAVVSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETFEK 336

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M   G   +  +Y NLI        +EE+   +R+M+E G + +  T + +     +  +
Sbjct: 337 MRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGN 396

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTL-------LIKELCKHGKAMEAFRFLTDMVQEGFLP 462
              A +  ++ +        KH++L       +I   C+     +A   + +M +EG   
Sbjct: 397 AESADHWFQEAKE-------KHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDA 449

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
            I  Y   + G   +   D  L +F      G  P V+ Y  +I+   K  +V++A ++ 
Sbjct: 450 PIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVS 509

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM   G+  ++ TY++LING+ K  +   A      ++ K+   PDV+ Y  +I   C 
Sbjct: 510 KEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI-KDGIKPDVVLYNNIITAFCG 568

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ D A+    EM+++   P   TFM +I G  +    + AL  F MM+  G  P +  
Sbjct: 569 MGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHT 628

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + ALI   + +     A ++L EM
Sbjct: 629 YNALILGLVEKRKMEKAEQILDEM 652


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 258/583 (44%), Gaps = 30/583 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  S N LLE+L        V      +   G   D +     +Q    +G  D+AL+
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 123 VFNEI-IDHGWVDEHVFSILLVAFSKW--GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +   +    G      FS  +V    W  G+   A ++ + M D  +  N+ T+  +I G
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            VK   ++   +L D+M + G   +   Y+V++ GLC+  +++    L  EM    + PD
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 240 ---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              + IL   +T   D   +  L  E  + + V      C+ ++  L  +G + +A  +L
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLK-KGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +               +++  G V P T+ ++ +IN   +   L  A S+F +M      
Sbjct: 359 E---------------MLVHTGLV-PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR 402

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   YN LI+GLC    + E+ +L+ EME+SG  P+  T N++     R   +     +
Sbjct: 403 PDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTV 462

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M+ +G +  V     ++K  CK+GK  EA   L DM+ +  +P+   Y++ I   I+
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
               + A  L   + + G    +  YN+++ GLCK  ++ EAE+L   +  +GL P V +
Sbjct: 523 SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVS 582

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN +I+  C  G+ D+A+  L  M  K    P + TY  L+  L  AGR  D   L+  M
Sbjct: 583 YNTIISACCNKGDTDRALELLQEM-HKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHM 641

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
             K   P+   +        +C+         + M EKG+  D
Sbjct: 642 VHKNVEPSSSIYGT------RCENESKVASLKKEMSEKGIAFD 678



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 208/451 (46%), Gaps = 59/451 (13%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIK--GEPIADV---------------GVEMLMI 315
           T   N  ++  V+ G +D+A  +L+ M +  G P  D                G + L +
Sbjct: 158 TFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKV 217

Query: 316 F-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           F     +G V+PN  +++ +I+  +K G L+    L  +M Q G   NV  YN L+ GLC
Sbjct: 218 FDEMVDRG-VAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            + R++E+  L+ EM      P  FT + +F  L R  D    L+L  +   +G      
Sbjct: 277 RAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAY 336

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             ++L+  LCK GK  +A + L  +V  G +P    Y+  I G   ++ +  A  +F  +
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW------ 544
            +    PD + YN +I+GLCK + + EAEDL  EM   G+ PSV T+N LI+ +      
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 545 -----------------------------CKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
                                        CK+G I +A+  L  M+ K+   P+   Y +
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDV-VPNAQVYNS 515

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +ID    +G  + A +L  +M+  G + +  T+  L+ GLCK  +   A      +  +G
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++PD+  +  +ISA  ++ +   A E+L+EM
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEM 606



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 174/374 (46%), Gaps = 3/374 (0%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM--TQ 352
           LL++++     ADV     ++      P+T +++  +   +  G LD AL++ R M  ++
Sbjct: 129 LLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSE 188

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
                + F YN +I GL  S +  ++ ++  EM + G  P   T N+M     +  D+  
Sbjct: 189 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEA 248

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
              L  +M   G +P V    +L+  LC+ G+  E    + +M     LPD   YS    
Sbjct: 249 GFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFD 308

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL         L LF +    G        +I+++GLCK  +VA+AE +   ++  GL+P
Sbjct: 309 GLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 368

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           + A YN LING+C+  ++  A     +M  +    PD ITY  LI+GLC      +A  L
Sbjct: 369 TTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI-RPDHITYNALINGLCKMEMITEAEDL 427

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
             EME+ G  P+  TF  LI    +  +          M++KG+K ++  F +++ AF  
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487

Query: 653 ELNPPLAFEVLKEM 666
               P A  +L +M
Sbjct: 488 NGKIPEAVAILDDM 501


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 229/509 (44%), Gaps = 46/509 (9%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F++LL A +K     +   L ++M    +  N  T  +LI+     +RV + L     + 
Sbjct: 94  FNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIM 153

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G+  D   Y  +I GLC   ++  A +L+  M+  G  P+      LI          
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKG-------- 205

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                            LC +        G+I+ A  L Q M+ G     +  +      
Sbjct: 206 -----------------LCRT--------GNINLALKLHQEMLNGTSPYAINCK------ 234

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               PN  S++III+ L K GK   A  LF EM   G   +V  ++ LID LC    + E
Sbjct: 235 ----PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIE 290

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + + L  M   G  P  FT  S+    C   D+  A  L   M  +G+EP V   T+LI 
Sbjct: 291 AKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIY 350

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK     EA +   +M++ G  PD+  +   + GL    +V  A +LF  +  H    
Sbjct: 351 GYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPK 410

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           ++   ++ + GLCK   + EA +LFNE+ +  +   + ++N LI+G CK+  ++ A    
Sbjct: 411 NLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELF 470

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            + L +E   PDV+TY  +I+G C  G+ D+A +L+  MEE GC PN +T+ AL+ G  K
Sbjct: 471 EK-LSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYK 529

Query: 618 CDRPR--AALVHFRMMKEKGMKPDMFVFV 644
            ++      L+H  + K+  +   ++  V
Sbjct: 530 NNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 34/473 (7%)

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +ALQ FD M +S  +     +++++G L K K       LY +M  +G++P+F  L+ LI
Sbjct: 79  QALQFFDLMMRSIIS-----FNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILI 133

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG----E 303
               +       V  + E            S M  ++  G I        ++IKG     
Sbjct: 134 NCLCN-------VNRVREGL----------SAMAGIMRRGYIPDVVTY-TSLIKGLCMEH 175

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ------IGCMQ 357
            I++     + + K    PN  ++  +I  L + G ++LAL L +EM        I C  
Sbjct: 176 RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKP 235

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N+F YN +ID LC   + +E+  L  EM + G +P   T +++   LC+   V+ A   +
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
             M ++G  P +   T LI+  C  G    A      M  +G+ PD++ Y+  I G    
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT 355

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             V+ A++L+ ++   G  PD+  + +++ GL  A +V +A+ LF  +    +  ++   
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           ++ ++G CK+G + +AM   +  L+  +   D+ ++  LIDGLC A + + A  L+ ++ 
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNE-LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS 474

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           ++G  P+ +T+  +I G CK  +   A + F+MM+E G  P++  + AL+  F
Sbjct: 475 QEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGF 527



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 7/302 (2%)

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           M+++  +N L+  L       + + L ++M  +G  P  FTLN +  CLC    V   L+
Sbjct: 88  MRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLS 147

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
            +  +  +G+ P V   T LIK LC   +  EA R    M + G  P++V Y   I GL 
Sbjct: 148 AMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLC 207

Query: 476 DIKRVDLALELFRDIC------AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
               ++LAL+L +++       A  C P++ +YNIII  LCK  +  EA+ LFNEM+ +G
Sbjct: 208 RTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQG 267

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P V T++ LI+  CK G + +A   L  M+ +    PD+ T+T+LI+G C+ G  D A
Sbjct: 268 VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLR-GIVPDLFTFTSLIEGFCLVGDLDSA 326

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L+  M  KG  P+ I++  LI G CK      A+  +  M   G  PDM  F  L+  
Sbjct: 327 KELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG 386

Query: 650 FL 651
             
Sbjct: 387 LF 388



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 7/277 (2%)

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + N +   L + +      +L +KM + G  P      +LI  LC   +  E    +  +
Sbjct: 93  SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           ++ G++PD+V Y++ I GL    R+  A  LF  +   GC P+VV Y  +I GLC+   +
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212

Query: 516 AEAEDLFNEMITK------GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
             A  L  EM+           P++ +YN++I+  CK G   +A    + M++ +   PD
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVD-QGVRPD 271

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           V+T++ LID LC  G   +A      M  +G  P+  TF +LI G C      +A   F 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M  KG +PD+  +  LI  +    N   A ++  EM
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 219/480 (45%), Gaps = 21/480 (4%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S+N LL AL K      V    K+M   G   + +TL  L+   CN  +  + LS    I
Sbjct: 93  SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGI 152

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +  G++ + V ++ L+        + +A  L  RM       N  T+  LI G  +   +
Sbjct: 153 MRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNI 212

Query: 187 DKALQLFDKMTK--SGFA----SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           + AL+L  +M    S +A     +   Y++II  LCK  + + A +L++EM   G+ PD 
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              S LI +   EG + +  K+  E       T++   I+  L +  S+ + + L+    
Sbjct: 273 VTFSALIDTLCKEG-MVIEAKKFLE-------TMMLRGIVPDLFTFTSLIEGFCLV---- 320

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            G+  +   + + M  KG   P+  S+ ++I    K   ++ A+ L+ EM ++G   ++ 
Sbjct: 321 -GDLDSAKELFLSMPSKG-YEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMK 378

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            +  L+ GL  + ++ ++ +L   ++        +  +     LC+   +  A+ L  ++
Sbjct: 379 TFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNEL 438

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +    +  ++    LI  LCK  K   A+     + QEG  PD+V Y   I G     +V
Sbjct: 439 KSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQV 498

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D A  LF+ +  +GC P+++ Y+ ++ G  K  ++ E   L ++MI K +  + + Y ++
Sbjct: 499 DNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 36/324 (11%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  +G  +EA  LF+++  +G+  P+  +++ L++ LCK   V   +  L+ M   G   
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGV-RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVP 305

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D +T T L++ +C  G  D A  +F  +   G+  + + +++L+  + K   V++A +L 
Sbjct: 306 DLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M       + KTFCVL+ G     +V  A +LF  +       +  +  V + GLCKN
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE----------DRD 268
             L  A++L++E+K   +  D E  + LI       +L    +  WE            D
Sbjct: 426 GCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKL----ETAWELFEKLSQEGLQPD 481

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T  ++ N   +    NG +D A  L Q                M+ +   +PN  ++ 
Sbjct: 482 VVTYCIMINGFCK----NGQVDNANILFQ----------------MMEENGCTPNLLTYS 521

Query: 329 IIINTLLKDGKLDLALSLFREMTQ 352
            +++   K+ KL+  + L  +M Q
Sbjct: 522 ALLHGFYKNNKLEEVVKLLHKMIQ 545



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 545 CKSGNID--QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           CK GNI   QA+     M+        +I++  L+  L           L+ +M   G +
Sbjct: 70  CKKGNITSTQALQFFDLMMR------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLS 123

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           PN  T   LI  LC  +R R  L     +  +G  PD+  + +LI     E
Sbjct: 124 PNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCME 174


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 223/471 (47%), Gaps = 26/471 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ ++ N L+   C    ++L    L ++  +G+  D  TLT L++  C  GQ  KAL  
Sbjct: 96  PDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHF 155

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++++  G+ +D+  +  L+    K GE   A +L+ R+D      N   +  +I    K
Sbjct: 156 HDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCK 215

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  V +A  LF +M+  G +++   Y  II G C   +L  AL   +EM    I PD  I
Sbjct: 216 RKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYI 275

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL-CNSIMRILVSNGSIDQAYNLLQAMIK 301
            + L+ +   EG+    VKE      V   T L  N I    + +G     +N +  M  
Sbjct: 276 YNTLVDALHKEGK----VKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLM-- 329

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             V+P+  S++I+IN L K  +++ AL+L++EM Q   + N   
Sbjct: 330 -----------------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVT 372

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+LIDGLC S R+  +++L+ EM + G      T NS+   LC+   +  A+ L+ KM+
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432

Query: 422 VQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            QG +P     N LL   LCK  +   A     D++ +G+ P++  Y+  I G      +
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLL 492

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           D A  L   +   GC P+ + + III  L +     +AE L  EMI +GL+
Sbjct: 493 DEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 237/540 (43%), Gaps = 60/540 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P    +N +L++  K      V    + ++      D +TL  L+  +C+ GQ + A S
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V ++I+  G+  + V  + L+      G+V KA    +++     RL++ ++  LI+G  
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K      A+QL  ++       +  MY+ II  LCK K +  A  L+SEM   GI+ +  
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S +I      G+LT                                 +A   L  M+ 
Sbjct: 240 TYSAIIHGFCIVGKLT---------------------------------EALGFLNEMVL 266

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             ++P+   ++ +++ L K+GK+  A ++   + +     NV  
Sbjct: 267 K----------------AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVIT 310

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LIDG            +   +   G  P  ++ N M   LC+ + V  ALNL ++M 
Sbjct: 311 YNTLIDGYAK--------HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMH 362

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P       LI  LCK G+   A+  + +M   G   +++ Y++ I GL    ++D
Sbjct: 363 QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLD 422

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGL-CKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
            A+ L   +   G  PD+   NI++ GL CK +R+  A+ LF +++ KG  P+V TYN++
Sbjct: 423 KAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNII 482

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I G CK G +D+A    S+M E    SP+ IT+  +I  L   G  D A  L  EM  +G
Sbjct: 483 IYGHCKEGLLDEAYALQSKM-EDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 232/533 (43%), Gaps = 65/533 (12%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ +L +F+K         L  R++   I+ +  T  +LI+ F    +++ A  +  K+ 
Sbjct: 66  FNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKIL 125

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G+  D      +I GLC   Q++ AL  + ++   G   D      LI      GE  
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGE-- 183

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                                                               +++L    
Sbjct: 184 ------------------------------------------------TRAAIQLLRRID 195

Query: 318 GTVS-PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           G ++ PN   ++ II+ L K   +  A +LF EM+  G   NV  Y+ +I G C   +L 
Sbjct: 196 GRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLT 255

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLL 435
           E+   L EM      P  +  N++   L +   V  A N++  +     +P V  +NTL+
Sbjct: 256 EALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI 315

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
                  G A   F  +  M   G  PD+  Y+  I  L  IKRV+ AL L++++     
Sbjct: 316 ------DGYAKHVFNAVGLM---GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNM 366

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+ V YN +I GLCK+ R++ A DL +EM  +G   +V TYN LING CK+G +D+A+ 
Sbjct: 367 VPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIA 426

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGL-CIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
            +++M  K+ G  PD+ T   L+ GL C   R  +A  L+ ++ +KG  PN  T+  +I 
Sbjct: 427 LINKM--KDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIY 484

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G CK      A      M++ G  P+   F  +I A L +     A ++L EM
Sbjct: 485 GHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 162/372 (43%), Gaps = 61/372 (16%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D AL  F  M  +     +  +N ++D             L R +E    +P  FTLN 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  C C    +  A +++ K+   G++P     T LIK LC  G+  +A  F   ++ +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F  D V Y   I G+  I     A++L R I      P+VV YN II  LCK + V+EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------------L 561
           +LF+EM  KG+  +V TY+ +I+G+C  G + +A+  L+ M                  L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 562 EKESG----------------SPDVITYTTLIDG-------------------------- 579
            KE                   P+VITY TLIDG                          
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 580 -LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            LC   R ++A+ L+ EM +K   PN +T+ +LI GLCK  R   A      M ++G   
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA 403

Query: 639 DMFVFVALISAF 650
           ++  + +LI+  
Sbjct: 404 NVITYNSLINGL 415



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 31/398 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  +  +G    A  L  ++    L  PN   YN +++ LCK   V        E
Sbjct: 170 SYGTLINGVCKIGETRAAIQLLRRIDGR-LTEPNVVMYNTIIDCLCKRKLVSEACNLFSE 228

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M   G   +  T + ++  +C  G+  +AL   NE++      D ++++ L+ A  K G+
Sbjct: 229 MSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGK 288

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A  ++  +    ++ N  T+  LI G+ K         +F+ +   G   D   Y++
Sbjct: 289 VKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTPDVWSYNI 340

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDR 267
           +I  LCK K++E AL LY EM    + P+    + LI      G ++    L+ E+  DR
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM-HDR 399

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
             +   +  NS++  L  NG +D+A  L+  M       D G++          P+  + 
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKM------KDQGIQ----------PDMYTL 443

Query: 328 DIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +I+++ LL  GK L  A  LF+++   G   NV+ YN +I G C    L+E+Y L  +ME
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +SG  P   T   +   L  + +   A  L+ +M  +G
Sbjct: 504 DSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 149/355 (41%), Gaps = 52/355 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I CL    LV EA  LF ++  +G+   N  +Y+ ++   C    +      L EM   
Sbjct: 209 IIDCLCKRKLVSEACNLFSEMSVKGISA-NVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSV---------------FNEIIDHGWVDEHVFS- 139
               D Y    L+      G+  +A +V               +N +ID G+  +HVF+ 
Sbjct: 268 AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID-GYA-KHVFNA 325

Query: 140 --------------ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
                         I++    K   V++A  L + M   N+  N  T+  LI G  K  R
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +  A  L D+M   G  ++   Y+ +I GLCKN QL+ A+ L ++MK  GI PD   L+ 
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNI 445

Query: 246 LITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L+     +G+     + +++D   +  +      N I+      G +D+AY L   M   
Sbjct: 446 LLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKM--- 502

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
               D G           SPN  +F III  LL+ G+ D A  L  EM   G ++
Sbjct: 503 ---EDSGC----------SPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLK 544


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 222/502 (44%), Gaps = 44/502 (8%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ LL   +K     +   L ++M    +  +  T  +LI+     +R+++ L     + 
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G+  D   +  +I GLC   ++  A +L+  M+  G TP+      LI      G + 
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
           + +K  W    +N  +                   +N                       
Sbjct: 214 IALK--WHQEMLNDTS----------------PYVFN----------------------- 232

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               PN  S+ III+ L K G  + A+ LF EM   G   NV  ++ LID LC   ++ +
Sbjct: 233 --CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIK 290

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +LL  M + G  P  FT  S+ +  C   D+  A  L   M  +G+EP V    +LI 
Sbjct: 291 AKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLIN 350

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK  K  EA +   +M+  G  PD+      +  L    +VD A ELFR I  +    
Sbjct: 351 GYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPK 410

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D+    I + GLCK   + EA  LFNE+ +  +   + T+  LI+G CK+G ++ A    
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            ++ E E   PD + Y+++I G C  G+ D A +L+ +MEE GC+P+ IT+  L+ G  +
Sbjct: 471 EKLYE-EGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYE 529

Query: 618 CDRPRAALVHFRMMKEKGMKPD 639
            ++    +     M EK + PD
Sbjct: 530 SNKLEKVVQLLHRMIEKDVWPD 551



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 229/506 (45%), Gaps = 96/506 (18%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V +A Q FD M +S F+     ++ ++ GL K +       LY +M  +G+ PD   L+ 
Sbjct: 77  VTQAHQFFDLMMRSIFS-----FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNI 131

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           LI                           LCN + RI                    E +
Sbjct: 132 LINC-------------------------LCN-VNRI-------------------NEGL 146

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
           A     M  I +    P+  +F  +I  L  + ++  A  LF  M ++GC  NV  Y  L
Sbjct: 147 A----AMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTL 202

Query: 366 IDGLC---NSN-RLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           I GLC   N N  L+   E+L +     F  +P   + + +   LC+  +   A+ L  +
Sbjct: 203 IKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNE 262

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  QG +P V   ++LI  LCK G+ ++A + L  M+Q G +P++  Y++ I G   +  
Sbjct: 263 MVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGD 322

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A ELF  + + G  PDV++YN++I+G CK  +V EA  LFNEM+  G+ P V T  +
Sbjct: 323 LNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGV 382

Query: 540 LI-----------------------------------NGWCKSGNIDQAMLCLSRMLEKE 564
           L+                                   +G CK+G I +AM   +  LE  
Sbjct: 383 LLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNE-LESY 441

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           +   D+ T+  LIDGLC AG+ + A  L+ ++ E+G  P+ + + ++I G CK  +   A
Sbjct: 442 NMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKA 501

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
            + F+ M+E G  PD+  +  L+  F
Sbjct: 502 NILFQKMEENGCSPDLITYSILMRGF 527



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 233/547 (42%), Gaps = 33/547 (6%)

Query: 25  RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           R     G   FL +C      V +A+  FD + R      + +S+N LL  L K      
Sbjct: 56  RISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR------SIFSFNRLLAGLAKIEHYSQ 109

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLV 143
           V    K+M   G   D  TL  L+   CN  + ++ L+    I+  G++ + V F+ L+ 
Sbjct: 110 VFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIK 169

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA- 202
                  + +A +L  RM       N  T+  LI G      ++ AL+   +M       
Sbjct: 170 GLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPY 229

Query: 203 -----SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
                 +   Y +II GLCK    E A+ L++EM   G+ P+    S LI     EG++ 
Sbjct: 230 VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289

Query: 258 LLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              K  E+     +        S+++     G ++ A  L  +M         G E    
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM------PSKGYE---- 339

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  S++++IN   K  K++ A+ LF EM  +G   +V     L+  L  + ++
Sbjct: 340 ------PDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 376 EESYELLREMEESGFKPTHFTLNSMF-RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +++ EL R ++     P    +  +F   LC+   +  A+ L  ++     +  ++    
Sbjct: 394 DDAKELFRVIKPYAM-PKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK GK   A+     + +EG  PD + YS+ I G     +VD A  LF+ +  +G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PD++ Y+I++ G  ++ ++ +   L + MI K + P    Y ++ +  CK     + +
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWL 572

Query: 555 LCLSRML 561
             L R  
Sbjct: 573 DLLQRFF 579



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 42/317 (13%)

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           M+++F +N L+ GL       + + L ++M  +G  P   TLN +  CL           
Sbjct: 88  MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCL----------- 136

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
                                   C   +  E    +  +++ G++PD+V ++  I GL 
Sbjct: 137 ------------------------CNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLC 172

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI--TKGLI-- 531
              R+  A +LF  +   GC P+VV Y  +I GLC    +  A     EM+  T   +  
Sbjct: 173 VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFN 232

Query: 532 --PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
             P+V +Y+++I+G CK GN ++A +CL   +  +   P+V+T++ LID LC  G+   A
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEA-ICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             L   M + G  PN  T+ +LI G C      +A   F  M  KG +PD+  +  LI+ 
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351

Query: 650 FLSELNPPLAFEVLKEM 666
           +   L    A ++  EM
Sbjct: 352 YCKTLKVEEAMKLFNEM 368


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/663 (23%), Positives = 284/663 (42%), Gaps = 55/663 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +P     LIR     G+V  A   F  +   G   P+ Y+ N ++ ++ K+C   LV
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGF-KPSVYTCNMIMASMVKNCRAHLV 159

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
               K+M       +  +   L+ V C  G+  KA+++   +  +G+V   V ++ LL  
Sbjct: 160 WSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSW 219

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G    A  LI  M+   I+ +  T+ + I    + SR  +   +  KM       +
Sbjct: 220 CCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPN 279

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKE 262
              Y+ +I G  K  ++ +A ++++EM    ++P+    + LI      G  E  L V +
Sbjct: 280 EVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLD 339

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           + E  DV    +   +++  L  +   D A N+L+                       S 
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINR----------------TSL 383

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S  ++I+ L ++G LD A  L  EM + G   ++  ++ LI+G C    + ++ E++
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVM 443

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            ++   GF P +   +++    C+  +V  A+     M + G          L+  LC++
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCEN 503

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--CAHGCCP--- 497
           GK +EA  FL  + + G +P+ V +   I G  ++     A  +F  +  C H   P   
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTY 563

Query: 498 ------------------------------DVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
                                         D ++YN +I  + K+  + EA  LF EMI 
Sbjct: 564 GSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ 623

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
             ++P   TY  +++G  + G +  A + L R+++KE  + + I YT  IDGL  AG+  
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A+ L+ EMEEKG + + I   ++  G  +  +  +A       + K + P++  F  L+
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743

Query: 648 SAF 650
             +
Sbjct: 744 HGY 746



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/576 (22%), Positives = 240/576 (41%), Gaps = 65/576 (11%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           +GY K  L  L Q   NSG  +    V  +       +  VF +L+  + + G V  A  
Sbjct: 70  YGYAKSILKHLAQK--NSGS-NFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVN 126

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
               M     + +  T  +++   VK  R       F +M  S    + + ++++I  LC
Sbjct: 127 TFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLC 186

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVN 270
              +L+ A+ + + M+ +G  P     + L++ C  +G     +  I          DV 
Sbjct: 187 VQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVC 246

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +  +S+ R    N    Q Y +L+ M                    ++PN  S++ +
Sbjct: 247 TYNMFIDSLCR----NSRSAQGYLVLKKM----------------RNKMITPNEVSYNTL 286

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN  +K+GK+ +A  +F EM ++    N+  YN LI+G C +   EE+  +L  ME +  
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P   T+ ++   L +      A N++ +  +         +T++I  LC++G   EAF+
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L                                    ++C  G  PD++ ++++I+G C
Sbjct: 407 LLI-----------------------------------EMCKDGVHPDIITFSVLINGFC 431

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   + +A+++ +++  +G +P+   ++ LI   CK GN+ +AM   + M      + D 
Sbjct: 432 KVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAM-NLNGQNADN 490

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            T  +L+  LC  G+  +A    + +   G  PN +TF  +I G         A   F  
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDR 550

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M   G  P  F + +L+       N   A ++LK++
Sbjct: 551 MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 142/605 (23%), Positives = 249/605 (41%), Gaps = 29/605 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI     VG + +A  +  ++ REG  VPNN  ++ L+   CK  +V         M   
Sbjct: 426  LINGFCKVGNINKAKEVMSKIYREGF-VPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLN 484

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   D +T   L+   C +G+  +A    + I   G V   V F  ++  ++  G+   A
Sbjct: 485  GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              + +RM  C    +  T+  L+    K     +A +L  K+     A D   Y+ +I  
Sbjct: 545  FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            + K+  L  A++L+ EM  + I PD    + +++    EG L  +   I+  R +    L
Sbjct: 605  ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL--VCAFIFLGRLMQKEIL 662

Query: 275  LCNSIMRI-----LVSNGSIDQAYNLLQAM---------IKGEPIADVGVEMLMIFKGT- 319
              NSI+       L   G    A  L + M         I    I D    M  +F  + 
Sbjct: 663  TLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASS 722

Query: 320  ---------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                     V PN ++F+I+++   +   +     L+  M + G   N   Y++LI GLC
Sbjct: 723  LISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLC 782

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            N   LE   ++L+            T N + R  C   D+   ++L   M V        
Sbjct: 783  NHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKD 842

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                +   L +   +   F F+ +M+++GF+P    Y   +  +  +  +  A +L   +
Sbjct: 843  TQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM 902

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             A G   D  A   ++ GL    ++ EA  +   M+    IP+ +T+  L++ +CK  N 
Sbjct: 903  VALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNF 962

Query: 551  DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             +A   L  ++E      D++ Y  LI   C  G    A+  + E+++KG  PN  T+  
Sbjct: 963  KEAH-NLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRV 1021

Query: 611  LITGL 615
            L++ +
Sbjct: 1022 LVSAI 1026



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 177/413 (42%), Gaps = 36/413 (8%)

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           N +T +      +LV       A ++L+ + +    ++    +LM      S N + FD+
Sbjct: 51  NHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDL 110

Query: 330 IINTLLKDG-----------------------------------KLDLALSLFREMTQIG 354
           +I   L+ G                                   +  L  S F++M    
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV  +N LI  LC   +L+++  +L  ME +G+ PT  + N++    C++     AL
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +G +  V    + I  LC++ ++ + +  L  M  +   P+ V Y+  I G 
Sbjct: 231 VLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGF 290

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           +   ++ +A  +F ++      P+++ YNI+I+G C      EA  + + M    + P+ 
Sbjct: 291 VKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNE 350

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T   L+NG  KS   D A   L R     + S + I++T +IDGLC  G  D+A  L  
Sbjct: 351 VTIGTLLNGLYKSAKFDVARNILERYCINRT-SLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           EM + G  P+ ITF  LI G CK      A      +  +G  P+  +F  LI
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 146/660 (22%), Positives = 264/660 (40%), Gaps = 82/660 (12%)

Query: 44  GLVEEANMLFDQVKR--EGLCVPNNYSYNC-----LLEALCKSCSVDLVEMRLKEMQDYG 96
           GL + A   FD  +   E  C+ N  S NC     +++ LC++  +D     L EM   G
Sbjct: 359 GLYKSAK--FDVARNILERYCI-NRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
              D  T + L+  +C  G  +KA  V ++I   G+V  +V FS L+    K G V +A 
Sbjct: 416 VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAM 475

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +    M+      +  T   L+    +  ++ +A +    +++ G   ++  +D II G 
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGY 535

Query: 216 CKNKQLEMALQLYSEMKGSGITPD-FEILSKLITSCSDEGELTLLVKEIWEDRDV----- 269
                   A  ++  M   G  P  F   S L   C  +          WE R +     
Sbjct: 536 ANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQ--------NFWEARKLLKKLH 587

Query: 270 ----NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                  T+  N+++  +  +G++ +A  L + MI+                  + P++ 
Sbjct: 588 CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN----------------ILPDSY 631

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLRE 384
           ++  I++ L+++G+L  A      + Q   +  N  +Y   IDGL  + + + +  L +E
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           MEE G       LNS+     R   V  A +L+ K R +   P +    +L+    +   
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            M  F+    M + GF P+ + Y + I GL +   ++L +++ +   A     D + +N+
Sbjct: 752 IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811

Query: 505 IISGLCKAQRVAEAEDL-----------------------------------FNEMITKG 529
           +I   C+   + +  DL                                    +EM+ KG
Sbjct: 812 LIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
            IP+   Y  ++   C+ G+I Q    L   +     S D      ++ GL + G+ ++A
Sbjct: 872 FIPTSKQYCTMMKRMCRVGDI-QGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEA 930

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + +   M      P   TF  L+   CK D  + A     +M+   +K D+  +  LISA
Sbjct: 931 MWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISA 990



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 6/176 (3%)

Query: 89   LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
            + EM   G+         +++  C  G    A  + ++++  G  +D+     ++   + 
Sbjct: 864  MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             G++++A  +++RM          TF  L+H F KK    +A  L   M       D   
Sbjct: 924  CGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVA 983

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE-----GELTL 258
            Y+V+I   C N  +  AL  Y E+K  G+ P+      L+++ S +     GE+ L
Sbjct: 984  YNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVL 1039


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 219/447 (48%), Gaps = 23/447 (5%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEI 263
           ++ I+  L K K    AL L+ +M+ +GI  DF   + LI   S  G      ++  K +
Sbjct: 73  FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKIL 132

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
            +  D N +T   N++++ L   G I QA N        + +   G  +  +  GT    
Sbjct: 133 KKGFDPNAITF--NTLIKGLCLKGHIHQALNF------HDKVVAQGFHLDQVSYGT---- 180

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
                 +IN L K G++  AL L + +       N  +YN +ID +C +  + ++++L  
Sbjct: 181 ------LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 234

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M      P  FT NS+    C    +  A+ L+ KM ++   P +   ++L+   CK G
Sbjct: 235 QMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEG 294

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA   L   +++  + D+V Y++ + G   +K ++ A ++F  + + G   +V +Y 
Sbjct: 295 KVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYT 354

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I+GLCK + V EA +LF EM  + +IP+V TYN LI+G  K G I   +  +  M ++
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               P++ITY +++D LC     D AI L   ++++G  P+  T+  LI GLC+  +   
Sbjct: 415 -GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLED 473

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A   F  +  KG   D++ +  +I  F
Sbjct: 474 AQKVFEDLLVKGYNLDVYTYTVMIQGF 500



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/557 (24%), Positives = 243/557 (43%), Gaps = 53/557 (9%)

Query: 47  EEANML--FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           EE N++  F+ +       P    +N +L +L K+          ++M+  G   D +T 
Sbjct: 49  EENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTF 108

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
             L+  +   G    + SVF +I+  G+    + F+ L+      G + +A    +++  
Sbjct: 109 NILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVA 168

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
               L++ ++  LI+G  K  R+  ALQL  ++       +A MY++II  +CK K +  
Sbjct: 169 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVND 228

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A  LYS+M    I+PD                                    CNS++   
Sbjct: 229 AFDLYSQMVAKRISPD---------------------------------DFTCNSLIYGF 255

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G + +A  LL  MI         +E        ++P   +F I+++   K+GK+  A
Sbjct: 256 CIMGQLKEAVGLLHKMI---------LE-------NINPRMYTFSILVDAFCKEGKVKEA 299

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             +     +   + +V  YN+L+DG C    + ++ ++   M   G      +  +M   
Sbjct: 300 KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMING 359

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+ + V  A+NL  +MR +   P V     LI  L K GK     + + +M   G  P+
Sbjct: 360 LCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPN 419

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ Y++ +  L     VD A+ L  ++   G  PD+  Y ++I GLC++ ++ +A+ +F 
Sbjct: 420 IITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFE 479

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           +++ KG    V TY ++I G+C  G  D A+  LS+M E     P+  TY  +I  L   
Sbjct: 480 DLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKM-EDNGCIPNAKTYEIVILSLFEK 538

Query: 584 GRPDDAIMLWNEMEEKG 600
              D A  L  EM  +G
Sbjct: 539 DENDMAEKLLREMIARG 555



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 234/526 (44%), Gaps = 67/526 (12%)

Query: 120 ALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           ALS+  ++  +G V D   F+IL+  FS+ G    +  +  ++       N  TF  LI 
Sbjct: 89  ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIK 148

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G   K  + +AL   DK+   GF  D   Y  +I GLCK  ++  ALQL   + G  + P
Sbjct: 149 GLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 208

Query: 239 DFEILSKLITS------CSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +  + + +I +       +D  +L   ++ K I  D         CNS++      G + 
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD------DFTCNSLIYGFCIMGQLK 262

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL  MI         +E        ++P   +F I+++   K+GK+  A  +    
Sbjct: 263 EAVGLLHKMI---------LE-------NINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            +   + +V  YN+L+DG C          L++E+ +                       
Sbjct: 307 MKKDIILDVVTYNSLMDGYC----------LVKEINK----------------------- 333

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A ++   M  +G    V+  T +I  LCK     EA     +M     +P++V Y++ 
Sbjct: 334 --AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL  + ++   L+L  ++   G  P+++ YN I+  LCK   V +A  L   +  +G+
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TY +LI G C+SG ++ A      +L K   + DV TYT +I G C+ G  D A+
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVK-GYNLDVYTYTVMIQGFCVKGLFDAAL 510

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
            L ++ME+ GC PN  T+  +I  L + D    A    R M  +G+
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 192/433 (44%), Gaps = 51/433 (11%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  VG +  A  L  +V  + L  PN   YN +++ +CK+  V+       +
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGK-LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGE 150
           M       D +T   L+  +C  GQ  +A+ + ++ I+++     + FSIL+ AF K G+
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK 295

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V +A  ++      +I L+  T+  L+ G+     ++KA  +FD M   G  ++   Y  
Sbjct: 296 VKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTT 355

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I GLCK K ++ A+ L+ EM+   I P+    + LI      G+++ ++K + E  D  
Sbjct: 356 MINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHD-- 413

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                                         +G+P                 PN  +++ I
Sbjct: 414 ------------------------------RGQP-----------------PNIITYNSI 426

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           ++ L K+  +D A++L   +   G   +++ Y  LI GLC S +LE++ ++  ++   G+
Sbjct: 427 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY 486

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
               +T   M +  C +     AL L+ KM   G  P  K   ++I  L +  +   A +
Sbjct: 487 NLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEK 546

Query: 451 FLTDMVQEGFLPD 463
            L +M+  G L +
Sbjct: 547 LLREMIARGLLDE 559


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 219/480 (45%), Gaps = 40/480 (8%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N + FC L+H        +K   L D   K+   S++ ++  +                 
Sbjct: 106 NVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL----------------- 148

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSN 286
             + GS    +  I+  L+ +    GE+ L ++  +   D       L CN ++  LV  
Sbjct: 149 -SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G I    ++ + MI+      +GV            N  +FD++IN L K GK   A  +
Sbjct: 208 GRIGVVESVYKEMIRRR----IGV------------NVVTFDVVINGLCKVGKFQKAGDV 251

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +M   G   +V  YN +IDG C + ++ ++  LL+EM      P   T N +    CR
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
            ++V  A  +  +M+ QG +P V     LI  LC +GK  EA      M   G  P++V 
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+A I G    K +  A E+  DI   G  P+V+ +N +I    KA R+ +A  L + M+
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G+ P+V+TYN LI G+C+ GN+ +A   L++ +E      D++TY  L+D LC  G  
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARK-LAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 587 DDAIMLWNE---MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
             A+ L +E   ME+KG   N +T+  LI G C   +   A      M EKG+ P+   +
Sbjct: 491 RKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 219/488 (44%), Gaps = 58/488 (11%)

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           Y NS  F  +LSV       G  +  +  +L+ A+ K GE+D A E  +R  D   RL+ 
Sbjct: 139 YSNSTIF-HSLSVLGS---WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSA 194

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            +   ++   VK+ R+     ++ +M +     +   +DV+I GLCK  + + A  +  +
Sbjct: 195 LSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVED 254

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           MK  G +P                                   +  N+I+      G + 
Sbjct: 255 MKAWGFSPS---------------------------------VITYNTIIDGYCKAGKMF 281

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  LL+ M+                   + PN  +F+I+I+   +D  +  A  +F EM
Sbjct: 282 KADALLKEMVAKR----------------IHPNEITFNILIDGFCRDENVTAAKKVFEEM 325

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   NV  YN+LI+GLC++ +L+E+  L  +M   G KP   T N++    C+++ +
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  ++  +  +G  P V     LI    K G+  +AF   + M+  G  P++  Y+  
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI---T 527
           I G      V  A +L +++  +G   D+V YNI++  LCK     +A  L +EM     
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR-P 586
           KG   ++ TYN+LI G+C  G +++A   L+ MLEK    P+  TY  L D +   G  P
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK-GLIPNRTTYDILRDEMMEKGFIP 564

Query: 587 DDAIMLWN 594
           D    L+N
Sbjct: 565 DIDGHLYN 572



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N+   D+++   +K+G++DLAL  F      G   +    N ++  L    R+     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           +EM          T + +   LC+      A ++V  M+  G  P V     +I   CK 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK  +A   L +MV +   P+ + ++  I G    + V  A ++F ++   G  P+VV Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I+GLC   ++ EA  L ++M   GL P+V TYN LING+CK   + +A   L   + 
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD-IG 396

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           K   +P+VIT+ TLID    AGR DDA +L + M + G  PN  T+  LI G C+    +
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A    + M+  G+K D+  +  L+ A   +     A  +L EM
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 196/447 (43%), Gaps = 73/447 (16%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S N +L +L K   + +VE   KEM     G +  T   ++   C  G+F KA  V  ++
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G+    + ++ ++  + K G++ KA  L++ M    I  NE TF +LI GF +   V
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A ++F++M + G   +   Y+ +I GLC N +L+ AL L  +M G G+ P+    + L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           I                            C   M        + +A  +L          
Sbjct: 376 ING-------------------------FCKKKM--------LKEAREMLD--------- 393

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           D+G       K  ++PN  +F+ +I+   K G++D A  L   M   G   NV  YN LI
Sbjct: 394 DIG-------KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV---Q 423
            G C    ++E+ +L +EME +G K    T N +   LC++ +   A+ L+ +M +   +
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G    +    +LIK  C  GK  EA R L +M+++G +P+   Y                
Sbjct: 507 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY---------------- 550

Query: 484 LELFRD-ICAHGCCPDVVA--YNIIIS 507
            ++ RD +   G  PD+    YN+ IS
Sbjct: 551 -DILRDEMMEKGFIPDIDGHLYNVSIS 576



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 170/393 (43%), Gaps = 37/393 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +  RI  +  + +++++ R  ++      +I  L  VG  ++A  + + +K  G   P
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS-P 262

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN +++  CK+  +   +  LKEM       ++ T   L+  +C       A  VF
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVF 322

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+   G     V ++ L+      G++D+A  L ++M    ++ N  T+  LI+GF KK
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +A ++ D + K G A +   ++ +I    K  +++ A  L S M  +G+ P+    
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTY 442

Query: 244 SKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + LI     EG   E   L KE+ E   +    +  N ++  L   G   +A  LL    
Sbjct: 443 NCLIVGFCREGNVKEARKLAKEM-EGNGLKADLVTYNILVDALCKKGETRKAVRLLD--- 498

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                     EM ++ K     N  +++++I      GKL+ A  L  EM + G + N  
Sbjct: 499 ----------EMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN-- 546

Query: 361 LYNNLIDGLCNSNRLEESYELLR-EMEESGFKP 392
                            +Y++LR EM E GF P
Sbjct: 547 ---------------RTTYDILRDEMMEKGFIP 564


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 249/569 (43%), Gaps = 23/569 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           LL     + +  K+  VF+        D   F+  + AF K G V  A +L  +M+   +
Sbjct: 227 LLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGV 286

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  T+  +I G  K  R ++AL+  D+M +S        Y V+I GL K +  E A +
Sbjct: 287 FPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANE 346

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           +  EM   G  P+  + + LI     +G++   L V++    + +    +  N++++   
Sbjct: 347 VLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFC 406

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGV---------------EMLMIFKGTVSPNTSSFDI 329
            +  ++QA  +L  ++      ++ V                 L I    +S N    D 
Sbjct: 407 RSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDS 466

Query: 330 IINTLLK-----DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           ++  L+      +G  +     F+     G   N    N L+ GLC    +EE +E+L++
Sbjct: 467 LLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQ 526

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M E G      + N++    C+   +  A  L  +M  Q  +P       L+K L   GK
Sbjct: 527 MLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGK 586

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +  R L +  + GF+P++  Y+  + G     R++ A++ F+++         V YNI
Sbjct: 587 IDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNI 646

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+  C+   V EA  L + M ++G++P+ ATY+ LI+G C  G +D+A      M   E
Sbjct: 647 LIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEM-RNE 705

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+V  YT LI G C  G+ D    +  EM   G  PN+IT+  +I G CK    + A
Sbjct: 706 GLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                 M   G+ PD   + AL   +  E
Sbjct: 766 RELLNEMIRNGIAPDTVTYNALQKGYCKE 794



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/574 (25%), Positives = 252/574 (43%), Gaps = 61/574 (10%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V+S+   S    G LI  L  + + EEAN +  ++   G   PN   +N L++  C+  
Sbjct: 316 MVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGF-APNEVVFNALIDGYCRKG 374

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
            +        EM   G   +  T   LLQ +C S Q ++A  V   I+  G  V+  V S
Sbjct: 375 DMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCS 434

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK- 198
            ++    +      A +++ ++   NIR+++     L+ G  K     +A++L+ K+   
Sbjct: 435 YVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAV 494

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G A++    + ++ GLC+   +E   ++  +M   G+  D    + LI  C        
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCK------ 548

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                W                      G I++A+ L + M++ E               
Sbjct: 549 -----W----------------------GKIEEAFKLKEEMVQQE--------------- 566

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              P+T +++ ++  L   GK+D    L  E  + G + NV+ Y  L++G C ++R+E++
Sbjct: 567 -FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDA 625

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
            +  + ++    + +    N +    CR  +V  A  L   M+ +G  P     + LI  
Sbjct: 626 VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHG 685

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           +C  G+  EA     +M  EG LP++ CY+A IGG   + ++D+   +  ++ ++G  P+
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPN 745

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + Y I+I G CK   + EA +L NEMI  G+ P   TYN L  G+CK     +  + L 
Sbjct: 746 KITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKE---RELTVTLQ 802

Query: 559 RMLEKESGSP--DVITYTTLIDGLCIAGRPDDAI 590
              +   G P  + ITY TLI  L     P  AI
Sbjct: 803 SDHKSNIGLPLEEEITYNTLIHKL----HPHTAI 832



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 226/515 (43%), Gaps = 52/515 (10%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           KT  +L+   VK + + K+ ++FD +   G A D   +   I   CK  ++  A+ L+ +
Sbjct: 222 KTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCK 280

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M+G G+ P+    + +I      G     ++  ++DR V +              N S+ 
Sbjct: 281 MEGLGVFPNVVTYNNVIDGLFKSGRFEEALR--FKDRMVRSKV------------NPSVV 326

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
               L+  ++K E   +    ++ ++    +PN   F+ +I+   + G +  AL +  EM
Sbjct: 327 TYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEM 386

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   N   +N L+ G C SN++E++ ++L  +  SG        + +   L  R   
Sbjct: 387 AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGF 446

Query: 411 VGALNLVRKM--------------------RVQGH----EPWVK--------HNTL---- 434
           V AL +V K+                    + +GH    E W K         NT+    
Sbjct: 447 VSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNA 506

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+  LC+ G   E F  L  M+++G L D + Y+  I G     +++ A +L  ++    
Sbjct: 507 LLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE 566

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD   YN ++ GL    ++ +   L +E    G +P+V TY LL+ G+CK+  I+ A+
Sbjct: 567 FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAV 626

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               + L+ E      + Y  LI   C  G   +A  L + M+ +G  P   T+ +LI G
Sbjct: 627 KFF-KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHG 685

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +C   R   A   F  M+ +G+ P++F + ALI  
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGG 720



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 53/421 (12%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKG--------------EPIADVGVEMLMIFKGTVSPNT 324
           ++R L+++  + +A  LL  +I G              + + ++   ML + +G+     
Sbjct: 124 LLRSLLADSFVPRARFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRL 183

Query: 325 SSFDIIINTLLKDGKL---DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
              D++++ L    K      A  +F   ++ G    +   N L+  L  +N L +SYE+
Sbjct: 184 GELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEV 243

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             ++   G  P  FT  +     C+   V  A++L  KM   G  P V     +I  L K
Sbjct: 244 F-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFK 302

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  EA RF   MV+    P +V Y   I GL+ ++  + A E+  ++ + G  P+ V 
Sbjct: 303 SGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVV 362

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N +I G C+   + EA  + +EM  KG+ P+  T+N L+ G+C+S  ++QA   L  +L
Sbjct: 363 FNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYIL 422

Query: 562 EKE-SGSPDVITY---------------------------------TTLIDGLCIAGRPD 587
               S + DV +Y                                 T L+ GLC      
Sbjct: 423 SSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHS 482

Query: 588 DAIMLWNEMEE-KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           +AI LW ++   KG A N +T  AL+ GLC+           + M EKG+  D   +  L
Sbjct: 483 EAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTL 542

Query: 647 I 647
           I
Sbjct: 543 I 543



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 19  QDVVKSRCFMSPGA-LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC 77
           +D +KSR  +   A    LI  +  +G V+EA  +F++++ EGL +PN + Y  L+   C
Sbjct: 664 RDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGL-LPNVFCYTALIGGHC 722

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV 137
           K   +D+V   L EM   G   +K T T ++  YC  G   +A  + NE+I +G   + V
Sbjct: 723 KLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTV 782

Query: 138 -FSILLVAFSKWGEVDKACELIERMDDCNIRL---NEKTFCVLIH 178
            ++ L   + K  E+      ++     NI L    E T+  LIH
Sbjct: 783 TYNALQKGYCKERELTVT---LQSDHKSNIGLPLEEEITYNTLIH 824


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 227/462 (49%), Gaps = 20/462 (4%)

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+VII    +++ L +++  ++EM  +G  P     + L+T                E+
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 267 RDVNTMTLLCNSIM-RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           +    + +    I+ +     G I+++++LL  +       + G           SPN  
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL------TEFGF----------SPNVV 199

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            +  +I+   K G+++ A  LF EM ++G + N   Y  LI+GL  +   ++ +E+  +M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGK 444
           +E G  P  +T N +   LC+      A  +  +MR +G     V +NTL I  LC+  K
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL-IGGLCREMK 318

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA + +  M  +G  P+++ Y+  I G   + ++  AL L RD+ + G  P +V YNI
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++SG C+    + A  +  EM  +G+ PS  TY +LI+ + +S N+++A+  L   +E+ 
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEEL 437

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PDV TY+ LI G CI G+ ++A  L+  M EK C PN + +  +I G CK      A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L   + M+EK + P++  +  +I     E     A  ++++M
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 239/514 (46%), Gaps = 65/514 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV------AFSKWGEVDKACELIE 159
           ++  Y  S   + ++S FNE++D+G+V   + F+ LL       +F++W           
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE----- 154

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
             +   + L+  +F +LI G  +   ++K+  L  ++T+ GF+ +  +Y  +I G CK  
Sbjct: 155 --NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A  L+ EM                      G+L L+  E        T T+L N +
Sbjct: 213 EIEKAKDLFFEM----------------------GKLGLVANE-------RTYTVLINGL 243

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    NG   Q + + + M +                  V PN  +++ ++N L KDG+
Sbjct: 244 FK----NGVKKQGFEMYEKMQED----------------GVFPNLYTYNCVMNQLCKDGR 283

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A  +F EM + G   N+  YN LI GLC   +L E+ +++ +M+  G  P   T N+
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    +  AL+L R ++ +G  P +    +L+   C+ G    A + + +M + G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P  V Y+  I        ++ A++L   +   G  PDV  Y+++I G C   ++ EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF  M+ K   P+   YN +I G+CK G+  +A+  L  M EKE  +P+V +Y  +I+ 
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL-APNVASYRYMIEV 522

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           LC   +  +A  L  +M + G  P+  + ++LI+
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 214/494 (43%), Gaps = 49/494 (9%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  ++ +  +S S++L      EM D G+         LL     S  F++  S FNE  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
               +D + F IL+    + GE++K+ +L+  + +     N   +  LI G  KK  ++K
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF +M K G  ++   Y V+I GL KN   +   ++Y +M+  G+ P+         
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY----- 271

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                       N +M  L  +G    A+ +   M +       
Sbjct: 272 ----------------------------NCVMNQLCKDGRTKDAFQVFDEMRE------- 296

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   +G VS N  +++ +I  L ++ KL+ A  +  +M   G   N+  YN LIDG
Sbjct: 297 --------RG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            C   +L ++  L R+++  G  P+  T N +    CR+ D  GA  +V++M  +G +P 
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+LI    +     +A +    M + G +PD+  YS  I G     +++ A  LF+
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +    C P+ V YN +I G CK      A  L  EM  K L P+VA+Y  +I   CK  
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527

Query: 549 NIDQAMLCLSRMLE 562
              +A   + +M++
Sbjct: 528 KSKEAERLVEKMID 541



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 59/394 (14%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YS+  L++  C++  ++     L E+ ++G+  +    T L+   C  G+ +KA  +F E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 127 IIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G V +E  +++L+    K G   +  E+ E+M +  +  N  T+  +++   K  R
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
              A Q+FD+M + G + +   Y+ +IGGLC+  +L  A ++  +MK  GI P+    + 
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343

Query: 246 LITSCSDEGEL--------------------------------------TLLVKEIWEDR 267
           LI      G+L                                        +VKE+ E+R
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EER 402

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------ 315
            +    +    ++     + ++++A  L  +M +   + DV    ++I            
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 316 ---FKGTVSPNTSSFDIIINTLL----KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
              FK  V  N    ++I NT++    K+G    AL L +EM +     NV  Y  +I+ 
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           LC   + +E+  L+ +M +SG  P+   L+ + R
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 3/223 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VG + +A  L   +K  GL  P+  +YN L+   C+          +KEM++ 
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLS-PSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G    K T T L+  +  S   +KA+ +   + + G V D H +S+L+  F   G++++A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M + N   NE  +  +I G+ K+    +AL+L  +M +   A + A Y  +I  
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           LCK ++ + A +L  +M  SGI P   ILS LI+   ++  ++
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILS-LISRAKNDSHVS 564


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 197/414 (47%), Gaps = 30/414 (7%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIW 264
           Y+ ++ G C   QL+ A +L +EM    + PD    + LI      G       ++ E+ 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 265 EDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
             R   DV T T+L  +  +         QA  LL  M       D G           +
Sbjct: 60  RRRCVPDVVTYTILLEATCK----RSGYKQAMKLLDEM------RDKGC----------T 99

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  ++++++N + ++G++D A+   + +   GC  N   YN ++ GLC + R E++ EL
Sbjct: 100 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           + EM + G  P   T N +   LCR+  V  AL ++ ++   G  P       L+   CK
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             K  +A  FL  MV  G  PDIV Y+  +  L     VD+A+EL   +   GC P +++
Sbjct: 220 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 279

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I GL KA +  EA +L NEM++KGL P + TY+ +  G C+   I+ A+    + +
Sbjct: 280 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK-V 338

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           +     P+ + Y  +I GLC       AI L+  M   GC PN  T+  LI GL
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 190/356 (53%), Gaps = 3/356 (0%)

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           AYN + A   G    D    +  + +  V P+  +++ +I  L   G+   AL++  EM 
Sbjct: 2   AYNAMVAGYCGAGQLDAARRL--VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +  C+ +V  Y  L++  C  +  +++ +LL EM + G  P   T N +   +C+   V 
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            A+  ++ +   G EP      +++K LC   +  +A   + +M Q+G  P++V ++  I
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
             L     V+ ALE+   I  +GC P+ ++YN ++   CK +++ +A    + M+++G  
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + +YN L+   C+SG +D A+  L ++ +K   +P +I+Y T+IDGL  AG+  +A+ 
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           L NEM  KG  P+ IT+  +  GLC+ DR   A+  F  +++ G++P+  ++ A+I
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 354



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 196/418 (46%), Gaps = 19/418 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ ++  +   G++D A  L+  M    +  +  T+  LI G   + R   AL + D+M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +     D   Y +++   CK    + A++L  EM+  G TPD    + ++     EG +
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEPIADVGVEMLMI 315
              ++ +   +++ +     N++            +YN+ L+ +   E   D    M  +
Sbjct: 119 DDAIEFL---KNLPSYGCEPNTV------------SYNIVLKGLCTAERWEDAEELMGEM 163

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +    PN  +F+++I+ L + G ++ AL +  ++ + GC  N   YN L+   C   ++
Sbjct: 164 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 223

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++   L  M   G  P   + N++   LCR  +V  A+ L+ +++ +G  P +     +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  L K GK  EA   L +MV +G  PDI+ YS    GL    R++ A+  F  +   G 
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            P+ V YN II GLCK +    A DLF  MI  G +P+ +TY +LI G    G I +A
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 164/305 (53%), Gaps = 4/305 (1%)

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN ++ G C + +L+ +  L+ EM     +P  +T N++ R LC R     AL ++ +M 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P V   T+L++  CK     +A + L +M  +G  PDIV Y+  + G+    RVD
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+E  +++ ++GC P+ V+YNI++ GLC A+R  +AE+L  EM  KG  P+V T+N+LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +  C+ G ++ A+  L + + K   +P+ ++Y  L+   C   + D A+   + M  +GC
Sbjct: 180 SFLCRKGLVEPALEVLEQ-IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P+ +++  L+T LC+      A+     +K+KG  P +  +  +I           A E
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 662 VLKEM 666
           +L EM
Sbjct: 299 LLNEM 303



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 206/463 (44%), Gaps = 53/463 (11%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +YN ++   C +  +D     + EM       D YT   L++  C  G+   AL+V +E+
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +    V + V ++ILL A  K     +A +L++ M D     +  T+ V+++G  ++ RV
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D A++    +   G   +   Y++++ GLC  ++ E A +L  EM   G  P        
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP-------- 170

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                                  N +T   N ++  L   G ++ A  +L+         
Sbjct: 171 -----------------------NVVTF--NMLISFLCRKGLVEPALEVLE--------- 196

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                   I K   +PN+ S++ +++   K  K+D A++    M   GC  ++  YN L+
Sbjct: 197 -------QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 249

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             LC S  ++ + ELL ++++ G  P   + N++   L +      AL L+ +M  +G +
Sbjct: 250 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 309

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +   + +   LC+  +  +A R    +   G  P+ V Y+A I GL   +    A++L
Sbjct: 310 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 369

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
           F  +  +GC P+   Y I+I GL     + EA DL +E+ ++ 
Sbjct: 370 FAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 184/434 (42%), Gaps = 54/434 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y+YN L+  L                                   C  G+   AL+V
Sbjct: 30  PDAYTYNTLIRGL-----------------------------------CGRGRTANALAV 54

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E++    V + V ++ILL A  K     +A +L++ M D     +  T+ V+++G  +
Sbjct: 55  LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 114

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + RVD A++    +   G   +   Y++++ GLC  ++ E A +L  EM   G  P+   
Sbjct: 115 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174

Query: 243 LSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + LI+    +G  E  L V E          +L  N ++        +D+A   L    
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD--- 231

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                       LM+ +G   P+  S++ ++  L + G++D+A+ L  ++   GC   + 
Sbjct: 232 ------------LMVSRGCY-PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 278

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN +IDGL  + + +E+ ELL EM   G +P   T +++   LCR   +  A+    K+
Sbjct: 279 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +  G  P       +I  LCK  +   A      M+  G +P+   Y+  I GL     +
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398

Query: 481 DLALELFRDICAHG 494
             A +L  ++C+  
Sbjct: 399 KEARDLLDELCSRA 412



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 181/441 (41%), Gaps = 41/441 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G    A  + D++ R   CVP+  +Y  LLEA CK          L EM+D 
Sbjct: 38  LIRGLCGRGRTANALAVLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 96

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   ++   C  G+ D A+     +  +G     V ++I+L         + A
Sbjct: 97  GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 156

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+  M       N  TF +LI    +K  V+ AL++ +++ K G   ++  Y+ ++  
Sbjct: 157 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK K+++ A+     M   G  PD    + L+T+    GE+ + V+ + + +D     +
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276

Query: 275 LC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           L   N+++  L   G   +A  LL  M+                KG + P+  ++  I  
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVS---------------KG-LQPDIITYSTIAA 320

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L ++ +++ A+  F ++  +G   N  LYN +I GLC       + +L   M  +G  P
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T   +   L                    +E  +K    L+ ELC   +A E     
Sbjct: 381 NESTYTILIEGL-------------------AYEGLIKEARDLLDELCS--RAGEEILLD 419

Query: 453 TDMVQEGFLPDIVCYSAAIGG 473
             ++   FL   +  S A GG
Sbjct: 420 VHLIDVAFLTTFLPCSNANGG 440



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 6/229 (2%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L   GLVE A  + +Q+ + G C PN+ SYN LL A CK   +D     L  M  
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYG-CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   D  +   LL   C SG+ D A+ + +++ D G     + ++ ++   +K G+  +
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 295

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL+  M    ++ +  T+  +  G  ++ R++ A++ F K+   G   +  +Y+ II 
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           GLCK ++   A+ L++ M G+G  P+    + LI   + EG    L+KE
Sbjct: 356 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG----LIKE 400



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 33/199 (16%)

Query: 500 VAYNIIISGLCKA--------------------------------QRVAEAEDLFNEMIT 527
           +AYN +++G C A                                 R A A  + +EM+ 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +  +P V TY +L+   CK     QAM  L  M +K   +PD++TY  +++G+C  GR D
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGRVD 119

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           DAI     +   GC PN +++  ++ GLC  +R   A      M +KG  P++  F  LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 648 SAFLSELNPPLAFEVLKEM 666
           S    +     A EVL+++
Sbjct: 180 SFLCRKGLVEPALEVLEQI 198


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 268/608 (44%), Gaps = 25/608 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  +  +++ LL+ L        +E+ L+ M+       +   + L+  Y  SG  D+AL
Sbjct: 87  CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRAL 146

Query: 122 SVFNEIID-HGWVDEHVFS-ILLVAFSKWGEVDKACELIERM----DDCNIRLNEKTFCV 175
            +F+ + + H  +   V S  LL    K G+VD A +L ++M    D     ++  T  +
Sbjct: 147 QLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 206

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++ G     ++++  +L       G       Y++II G CK   L+ A +   E+K  G
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAY 293
           + P  E    LI      GE   + + + E   R +N    + N+++      G + +A 
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAA 326

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             ++ M      A++G            P+ ++++ +IN   K G++  A     +  + 
Sbjct: 327 ETMRRM------AEMGC----------GPDITTYNTMINFSCKGGRIKEADEFLEKAKER 370

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G + N F Y  L+   C      ++  +L  + E G KP   +  +    +    ++  A
Sbjct: 371 GLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVA 430

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           L +  KM  +G  P  +   +L+  LCK+G+       L++M+     PD+  ++  + G
Sbjct: 431 LMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDG 490

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            I    +D A+++F+ I   G  P +V YN +I G CK  ++ +A    N+M      P 
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD 550

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
             TY+ +I+G+ K  ++  A+    +M+ K    P+VITYT+LI+G C       A  ++
Sbjct: 551 EYTYSTVIDGYVKQHDMSSALKMFGQMM-KHKFKPNVITYTSLINGFCKKADMIRAEKVF 609

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             M+     PN +T+  L+ G  K  +P  A   F +M   G  P+   F  LI+   + 
Sbjct: 610 RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNT 669

Query: 654 LNPPLAFE 661
              P+  E
Sbjct: 670 ATSPVLIE 677



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 241/572 (42%), Gaps = 96/572 (16%)

Query: 138 FSILLVAFSKWGEVDKACEL---IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           FS L++A+ + G +D+A +L   +  M +C   +       L++G VK  +VD ALQL+D
Sbjct: 129 FSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASN--SLLNGLVKSGKVDVALQLYD 186

Query: 195 KMTKS----GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           KM ++    G   D     +++ GLC   ++E   +L  +  G G  P     + +I   
Sbjct: 187 KMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGY 246

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
             +G+L    + + E +                                +KG        
Sbjct: 247 CKKGDLQCATRTLKELK--------------------------------MKG-------- 266

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                    V P   ++  +IN   K G+ +    L  EM   G   NV ++NN+ID   
Sbjct: 267 ---------VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEF 317

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               + ++ E +R M E G  P   T N+M    C+   +  A   + K + +G  P   
Sbjct: 318 KYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKF 377

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T L+   CK G  ++A   L  + + G  PD+V Y A I G++    +D+AL +   +
Sbjct: 378 SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKM 437

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVA---------------------------------- 516
              G  PD   YN+++SGLCK  R                                    
Sbjct: 438 MEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGEL 497

Query: 517 -EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  +F  +I KG+ P +  YN +I G+CK G +  A+ CL++M +    +PD  TY+T
Sbjct: 498 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM-KNVHHAPDEYTYST 556

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHFRMMKEK 634
           +IDG         A+ ++ +M +    PN IT+ +LI G C K D  RA  V FR MK  
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV-FRGMKSF 615

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + P++  +  L+  F     P  A  + + M
Sbjct: 616 DLVPNVVTYTTLVGGFFKAGKPEKATSIFELM 647



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 246/556 (44%), Gaps = 24/556 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL-VEMRLK 90
           A   LI   G  G ++ A  LF  V+    C+P   + N LL  L KS  VD+ +++  K
Sbjct: 128 AFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDK 187

Query: 91  EMQ-DYGWG--YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFS 146
            +Q D G G   D YT + +++  CN G+ ++   +  +    G V   VF ++++  + 
Sbjct: 188 MLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYC 247

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G++  A   ++ +    +    +T+  LI+GF K    +   QL  +M   G   +  
Sbjct: 248 KKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVK 307

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIW 264
           +++ +I    K   +  A +    M   G  PD    + +I      G +    +  E  
Sbjct: 308 VFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKA 367

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           ++R +         +M      G   +A  +L        IA++G +          P+ 
Sbjct: 368 KERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFR------IAEIGEK----------PDL 411

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+   I+ ++  G++D+AL +  +M + G   +  +YN L+ GLC + R      LL E
Sbjct: 412 VSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSE 471

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M +   +P  +   ++     R  ++  A+ + + +  +G +P +     +IK  CK GK
Sbjct: 472 MLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 531

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A   L  M      PD   YS  I G +    +  AL++F  +  H   P+V+ Y  
Sbjct: 532 MTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTS 591

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+G CK   +  AE +F  M +  L+P+V TY  L+ G+ K+G  ++A      ML   
Sbjct: 592 LINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELML-MN 650

Query: 565 SGSPDVITYTTLIDGL 580
              P+  T+  LI+GL
Sbjct: 651 GCPPNDATFHYLINGL 666



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 132/617 (21%), Positives = 254/617 (41%), Gaps = 106/617 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++ L ++G +EE   L      +G CVP+   YN +++  CK   +      LKE++  
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKG-CVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMK 265

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKA---------------LSVFNEIID----HGWVDEH 136
           G      T   L+  +C +G+F+                 + VFN +ID    +G V + 
Sbjct: 266 GVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKA 325

Query: 137 VFSI----------------LLVAFS-KWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             ++                 ++ FS K G + +A E +E+  +  +  N+ ++  L+H 
Sbjct: 326 AETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHA 385

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K+    KA  +  ++ + G   D   Y   I G+  + ++++AL +  +M   G+ PD
Sbjct: 386 YCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPD 445

Query: 240 FEILSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            +I + L++     G    + LL+ E+  DR+V     +  ++M   + NG +D+A  + 
Sbjct: 446 AQIYNVLMSGLCKNGRFPAMKLLLSEML-DRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           + +I+               KG V P    ++ +I    K GK+  ALS   +M  +   
Sbjct: 505 KVIIR---------------KG-VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHA 548

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + + Y+ +IDG    + +  + ++  +M +  FKP   T  S+    C++ D++ A  +
Sbjct: 549 PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV 608

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGK-------------------------------- 444
            R M+     P V   T L+    K GK                                
Sbjct: 609 FRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668

Query: 445 ------------AMEAFR-----FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                       +ME  R     F T M+ EG+   I  Y++ I  L     VD A  L 
Sbjct: 669 TATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLL 728

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G   D V +  ++ GLC   +  E  ++ +  + K  + +   Y+L ++ +   
Sbjct: 729 TKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQ 788

Query: 548 GNIDQAMLCLSRMLEKE 564
           G + +A + L  ++E++
Sbjct: 789 GRLSEASVILQTLIEED 805


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 277/614 (45%), Gaps = 34/614 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-LVEMRLKEMQD 94
           L+ C       E A   F Q+ R GL V +    N LL+  C++   D  +++ L    +
Sbjct: 121 LMDCCTRAHRPELALAFFGQLLRTGLRV-DIIIANHLLKGFCEAKRTDEALDILLHRTPE 179

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSILLVAFSKWGEV 151
            G   D ++ + LL+  C+ G+  +A  +   + + G V   D   ++ ++  F K G+V
Sbjct: 180 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDV 239

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           +KAC+L + M    I  +  T+  ++H   K   + KA     +M   G   D   Y+ +
Sbjct: 240 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNL 299

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV-N 270
           I G     Q + A++++ EM+   I PD   L+ L+ S    G+       I E RDV +
Sbjct: 300 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK-------IKEARDVFD 352

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-----LMIFKGTVSPNTS 325
           TM +            G     ++  + M+ G       V+M     LM+  G ++P+  
Sbjct: 353 TMAM-----------KGQNPDVFSY-KIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDIY 399

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F ++I      G LD A+ +F EM   G   +V  Y  +I  LC   +++++ E   +M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            + G  P  +  + + +  C    ++ A  L+ ++   G    +   + +I  LCK G+ 
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           M+A       V  G  PD V YS  + G   + +++ AL +F  + + G  P+VV Y  +
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ++G CK  R+ E   LF EM+ KG+ PS   YN++I+G   +G    A +    M   ES
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM--TES 637

Query: 566 G-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           G + +  TY  ++ G       D+AI L+ E+       + IT   +I G+ +  R   A
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 697

Query: 625 LVHFRMMKEKGMKP 638
              F  +   G+ P
Sbjct: 698 KDLFASISRSGLVP 711



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 254/592 (42%), Gaps = 54/592 (9%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P +++Y  L++   ++   +L      ++   G   D      LL+ +C + + D+AL +
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 124 F-NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK--TFCVLIHG 179
             +   + G V D   +SILL +    G+  +A +L+  M +     +     +  +I  
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F K+  V+KA  LF +M + G   D   Y  ++  LCK + +  A     +M   G+ PD
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI   S  G+    V+   E R                                
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMR-------------------------------- 320

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                            + ++ P+  + ++++ +L K GK+  A  +F  M   G   +V
Sbjct: 321 -----------------RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 363

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F Y  +++G      L +  +L   M   G  P  +T + + +       +  A+ +  +
Sbjct: 364 FSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNE 423

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           MR  G +P V   T +I  LC+ GK  +A      M+ +G  PD   Y   I G      
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A EL  +I  +G   D+V ++ II+ LCK  R+ +A+++F+  +  G  P    Y++
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L++G+C  G +++A+     M+      P+V+ Y TL++G C  GR D+ + L+ EM +K
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVS-AGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK 602

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           G  P+ I +  +I GL    R   A V F  M E G+  +   +  ++  F 
Sbjct: 603 GIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFF 654



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 179/351 (50%), Gaps = 9/351 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIII-NTLLKD----GKLDLALSLFREMT-QIGCMQNVFLYNN 364
           E+ + F G +       DIII N LLK      + D AL +    T ++GC+ +VF Y+ 
Sbjct: 132 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 191

Query: 365 LIDGLCNSNRLEESYELLREMEESGF--KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           L+  LC+  +  ++ +LLR M E G    P      ++  C  +  DV  A +L ++M  
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P +   + ++  LCK     +A  FL  MV +G LPD   Y+  I G     +   
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ +F+++  H   PDVV  N+++  LCK  ++ EA D+F+ M  KG  P V +Y +++N
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+   G +   M  L  ++  +  +PD+ T++ LI      G  D A++++NEM + G  
Sbjct: 372 GYATKGCLVD-MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK 430

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P+ +T+  +I  LC+  +   A+  F  M ++G+ PD + +  LI  F + 
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 481



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 251/513 (48%), Gaps = 22/513 (4%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP  + +  +I C    G V +A  LF ++ + G+  P+  +Y+ ++ ALCK+ ++   E
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMGKAE 278

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
             L++M + G   D +T   L+  Y ++GQ+ +A+ VF E+  H  + + V  ++L+ + 
Sbjct: 279 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSL 338

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K+G++ +A ++ + M       +  ++ ++++G+  K  +     LFD M   G A D 
Sbjct: 339 CKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDI 398

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             + V+I        L+ A+ +++EM+  G+ PD    + +I +    G++   +++  +
Sbjct: 399 YTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQ 458

Query: 266 --DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
             D+ V       + +++   ++GS+ +A  L+  ++        G+ + ++F       
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN------GMRLDIVF------- 505

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              F  IIN L K G++  A ++F     +G   +  +Y+ L+DG C   ++E++  +  
Sbjct: 506 ---FSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFD 562

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M  +G +P      ++    C+   +   L+L R+M  +G +P      ++I  L   G
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           + + A     +M + G   +   Y+  + G    +  D A+ LF+++ A     D++  N
Sbjct: 623 RTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLN 682

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            +I+G+ + +RV EA+DLF  +   GL+P V T
Sbjct: 683 TMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 167/350 (47%), Gaps = 22/350 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LFD +  +G+  P+ Y+++ L++A      +D   +   EM+D+G   D  T T ++   
Sbjct: 385 LFDLMLGDGI-APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443

Query: 112 CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ D A+  FN++ID G   D++ +  L+  F   G + KA ELI  + +  +RL+ 
Sbjct: 444 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             F  +I+   K  R+  A  +FD     G   DA +Y +++ G C   ++E AL+++  
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563

Query: 231 MKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           M  +GI P+  +   L+      G +     L +E+ + + +   T+L N I+  L   G
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ-KGIKPSTILYNIIIDGLFVAG 622

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
                   + A +K   + + G+ +          N  +++I++    K+   D A+ LF
Sbjct: 623 RT------VPAKVKFHEMTESGIAI----------NKCTYNIVLRGFFKNRCFDEAIFLF 666

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           +E+  +    ++   N +I G+  + R+EE+ +L   +  SG  P   T+
Sbjct: 667 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 226/493 (45%), Gaps = 50/493 (10%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           ++ ++D + +L   M  C    +   F  L+    K  + D  + L+++M   G   +  
Sbjct: 58  RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
             ++++   C+  QL +AL    +M   G  PD                           
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPD--------------------------- 150

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                           +V+ GS      LL    +G+ I D       + +    PN   
Sbjct: 151 ----------------IVTFGS------LLNGFCRGDRIYDALYMFDRMVEMGYEPNVVI 188

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ II+ L K  ++D AL L   M   G   +   YN+LI GLCNS R +++  ++  M 
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           +    P  FT N++     +   +  A  L  +M  +  +P +   +LLI  LC + +  
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA +    MV +G  PD+V YS  I G    K+V+  ++LF ++   G   + V Y ++I
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G C+A ++  AE++F  M+  G+ P++ TYN+L++G C +G I++A++ L+ M +K   
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM-QKSGM 427

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
             D++TY  +I G+C AG   DA  L+  +  KG  P+  T+ A++ GL K      A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487

Query: 627 HFRMMKEKGMKPD 639
            FR MKE G+ P+
Sbjct: 488 LFRKMKEDGILPN 500



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 213/431 (49%), Gaps = 21/431 (4%)

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTMTLLC 276
           +L+ +L L+  M      P     S+L+++ S   +  +++  +WE      +      C
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY-LWEQMQMLGIPHNLCTC 119

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++        +  A + L  M+K      +G E          P+  +F  ++N   +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMK------LGHE----------PDIVTFGSLLNGFCR 163

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             ++  AL +F  M ++G   NV +YN +IDGLC S +++ + +LL  ME  G +P   T
Sbjct: 164 GDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVT 223

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            NS+   LC       A  +V  M  +   P V     LI    K G+  EA     +M+
Sbjct: 224 YNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +    PDIV YS  I GL    R+D A ++F  + + GC PDVV Y+I+I+G CK+++V 
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
               LF EM  +G++ +  TY +LI G+C++G ++ A      M+      P++ITY  L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFC-GVPPNIITYNVL 402

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + GLC  G+ + A+++  +M++ G   + +T+  +I G+CK      A   +  +  KG+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGL 462

Query: 637 KPDMFVFVALI 647
            PD++ + A++
Sbjct: 463 TPDIWTYTAMM 473



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 174/330 (52%), Gaps = 1/330 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +  N  + +I++N   +  +L LALS   +M ++G   ++  + +L++G C  +R+ ++ 
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDAL 171

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +   M E G++P     N++   LC+ + V  AL+L+ +M V G  P       LI  L
Sbjct: 172 YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+  +A R ++ M +    PD+  ++A I   +   R+  A EL+ ++      PD+
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y+++I GLC   R+ EAE +F  M++KG  P V TY++LING+CKS  ++  M     
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M ++     + +TYT LI G C AG+ + A  ++  M   G  PN IT+  L+ GLC   
Sbjct: 352 MSQR-GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +   ALV    M++ GM  D+  +  +I  
Sbjct: 411 KIEKALVILADMQKSGMDADIVTYNIIIRG 440



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+ + F  +++ + K  K D+ + L+ +M  +G   N+   N L++  C  ++L  +   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M + G +P   T  S+    CR   +  AL +  +M   G+EP V     +I  LCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             +   A   L  M  +G  PD V Y++ I GL +  R D A  +   +      PDV  
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N +I    K  R++EAE+L+ EMI + L P + TY+LLI G C    +D+A      M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    PDV+TY+ LI+G C + + +  + L+ EM ++G   N +T+  LI G C+  + 
Sbjct: 319 SKGC-FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F+ M   G+ P++  +  L+           A  +L +M
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 5/337 (1%)

Query: 334 LLKDG----KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +L++G    KLD +L LF  M Q   + ++  ++ L+  +    + +    L  +M+  G
Sbjct: 52  MLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                 T N +  C CR   +  AL+ + KM   GHEP +     L+   C+  +  +A 
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDAL 171

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
                MV+ G+ P++V Y+  I GL   K+VD AL+L   +   G  PD V YN +ISGL
Sbjct: 172 YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C + R  +A  + + M  + + P V T+N LI+   K G I +A      M+ + S  PD
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI-RRSLDPD 290

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           ++TY+ LI GLC+  R D+A  ++  M  KGC P+ +T+  LI G CK  +    +  F 
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M ++G+  +   +  LI  +       +A E+ K M
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 199/444 (44%), Gaps = 29/444 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   ++ LL A+ K    D+V    ++MQ  G  ++  T   LL  +C   Q   ALS
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
              +++  G   + V F  LL  F +   +  A  + +RM +     N   +  +I G  
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +VD AL L ++M   G   DA  Y+ +I GLC + + + A ++ S M    I PD  
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 242 ILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
             + LI +C  EG ++   +E++E       D D+ T +LL       L     +D+A  
Sbjct: 258 TFNALIDACVKEGRIS-EAEELYEEMIRRSLDPDIVTYSLLIYG----LCMYSRLDEAEQ 312

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           +                  M+ KG   P+  ++ I+IN   K  K++  + LF EM+Q G
Sbjct: 313 MFG---------------FMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            ++N   Y  LI G C + +L  + E+ + M   G  P   T N +   LC    +  AL
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            ++  M+  G +  +    ++I+ +CK G+  +A+     +  +G  PDI  Y+A + GL
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476

Query: 475 IDIKRVDLALELFRDICAHGCCPD 498
                   A  LFR +   G  P+
Sbjct: 477 YKKGLRGEADALFRKMKEDGILPN 500



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 165/353 (46%), Gaps = 22/353 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           + +A  +FD++   G   PN   YN +++ LCKS  VD     L  M+  G   D  T  
Sbjct: 167 IYDALYMFDRMVEMGY-EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+   CNSG++D A  + + +     + D   F+ L+ A  K G + +A EL E M   
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           ++  +  T+ +LI+G    SR+D+A Q+F  M   G   D   Y ++I G CK+K++E  
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMR 281
           ++L+ EM   G+  +    + LI      G+L  + +EI++      V    +  N ++ 
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN-VAEEIFKWMVFCGVPPNIITYNVLLH 404

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  NG I++A  +L  M K    AD+                 +++III  + K G++ 
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADI----------------VTYNIIIRGMCKAGEVA 448

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            A  L+  +   G   +++ Y  ++ GL       E+  L R+M+E G  P  
Sbjct: 449 DAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 5/227 (2%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  L++++ R  L  P+  +Y+ L+  LC    +D  E     M   G   D  T
Sbjct: 270 GRISEAEELYEEMIRRSL-DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVT 328

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + L+  YC S + +  + +F E+   G V   V +++L+  + + G+++ A E+ + M 
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMV 388

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C +  N  T+ VL+HG     +++KAL +   M KSG  +D   Y++II G+CK  ++ 
Sbjct: 389 FCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVA 448

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKEIWED 266
            A  LY  +   G+TPD    + ++     +   GE   L +++ ED
Sbjct: 449 DAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 272/629 (43%), Gaps = 53/629 (8%)

Query: 27  FMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           F S  +  FL+  L     + ++  +FD + R G+ + + Y+Y   + A CK   +D   
Sbjct: 203 FPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLI-DVYTYATAINAYCKGGKIDEAV 261

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
               +M + G   +  T   L+   C SG+ ++AL     ++++      V + IL+   
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K+ + D+A  ++  M       NE  F  LI G+ +K  +D AL++ D MT  G   +A
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             ++ ++ G C+  Q+E A Q               +L  L+++          V  + E
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQ---------------VLEYLLSN----------VLSVNE 416

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           D         C+ ++ +L  +   D A  +++A++    + ++ V            N S
Sbjct: 417 DA--------CSYVLHLLCKSSKFDSALKIVKALL----LRNIKV------------NDS 452

Query: 326 SFDIIINTLLKDGKLDLALSL-FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
              +++  L K GK   A+ L FR   + G   N    N L+ GLC    +EE + + +E
Sbjct: 453 LLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKE 512

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M E G      + N++    C+   +  A  L  KM  QG +P       L+K L   GK
Sbjct: 513 MVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGK 572

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +  R L +    G +P+I  Y+  + G  +  R+D A+ LF  +  +      V YNI
Sbjct: 573 MDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNI 632

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+   KA    EA  L + M +  + P++ TY+ +I+G C +  +++A      M   E
Sbjct: 633 LIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEM-RNE 691

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+V  YT LI G C  G+ D    +  EM      PN+IT+  +I G CK    + A
Sbjct: 692 GLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEA 751

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSE 653
                 M   G+ PD   +  L   +  E
Sbjct: 752 TKLLNEMIANGISPDTVTYTVLQKGYCKE 780



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 261/561 (46%), Gaps = 32/561 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G ++EA  LF ++  EG  +PN  +YN L++ LCKS  ++   M    M +        T
Sbjct: 255 GKIDEAVGLFLKMG-EGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVT 313

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+       +FD+A SV  E+   G+  +E VF+ L+  +S+ G +D A  + + M 
Sbjct: 314 YGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMT 373

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ N  T   L+ GF + +++++A Q+ + +  +  + +      ++  LCK+ + +
Sbjct: 374 LKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFD 433

Query: 223 MALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
            AL++   +    I  +  +L+ L+     C    E   L   + + + +   T   N++
Sbjct: 434 SALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNAL 493

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTV 320
           +  L   G++++ + + + M++   + D      +IF                   K   
Sbjct: 494 LYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGF 553

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+T +++ ++  L   GK+D    +  E    G + N++ Y  +++G CN++R++ +  
Sbjct: 554 KPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVS 613

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  ++  +  + ++   N +     +  +   A  L   MR     P +   + +I  +C
Sbjct: 614 LFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMC 673

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
            +    EA     +M  EG +P++ CY+A IGG   + ++D    + +++ ++   P+ +
Sbjct: 674 CNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKI 733

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y I+I G CK     EA  L NEMI  G+ P   TY +L  G+CK   +++        
Sbjct: 734 TYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET------- 786

Query: 561 LEKESGSP-DVITYTTLIDGL 580
           L+ ++  P + ITYTTL+D L
Sbjct: 787 LQGDTAVPLEEITYTTLVDKL 807



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 194/463 (41%), Gaps = 90/463 (19%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           CN +M  LV +  + +++ +  AM +G  + DV                 ++   IN   
Sbjct: 209 CNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDV----------------YTYATAINAYC 252

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY---------------- 379
           K GK+D A+ LF +M + G + NV  YNNLIDGLC S RLEE+                 
Sbjct: 253 KGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLV 312

Query: 380 -------------------ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
                               +L EM   GF P  F  N++     R+ ++  AL +   M
Sbjct: 313 TYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDM 372

Query: 421 RVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQE---------GFLPDIVCYSAA 470
            ++G +P  V HNTLL +  C+  +  +A + L  ++            ++  ++C S+ 
Sbjct: 373 TLKGLKPNAVTHNTLL-QGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSK 431

Query: 471 IGG---------LIDIKRVDLALEL------------------FRDICAHGCCPDVVAYN 503
                       L +IK  D  L L                  FR     G   +    N
Sbjct: 432 FDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSN 491

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            ++ GLC+   + E   +  EM+ +GL+    +YN LI G CKSG I++A     +M+ K
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM-K 550

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   PD  TY  L+ GL   G+ DD   + +E ++ G  PN  T+  ++ G C  DR   
Sbjct: 551 QGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDN 610

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A+  F  +    ++    V+  LI+A     N   AF++   M
Sbjct: 611 AVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 161/337 (47%), Gaps = 3/337 (0%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ML   KG V P+  S + ++++L+K  +L  +  +F  M + G + +V+ Y   I+  C 
Sbjct: 195 MLFTSKG-VFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCK 253

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             +++E+  L  +M E G  P   T N++   LC+   +  AL    +M      P +  
Sbjct: 254 GGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVT 313

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +L+  L K  K  EA   L +M  +GF P+   ++A I G      +D AL +  D+ 
Sbjct: 314 YGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMT 373

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  P+ V +N ++ G C+  ++ +AE +   +++  L  +    + +++  CKS   D
Sbjct: 374 LKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFD 433

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNRITFMA 610
            A+  +  +L +     D +  T L+ GLC  G+  +AI LW  + ++KG A N  T  A
Sbjct: 434 SALKIVKALLLRNIKVNDSL-LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNA 492

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           L+ GLC+           + M E+G+  D   +  LI
Sbjct: 493 LLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLI 529


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 231/509 (45%), Gaps = 56/509 (11%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +F  L+ G  K     +   L+++M  SG +SD    ++++  LC   +L      ++ +
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130

Query: 232 KGSGITPDFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
              G +P+    + LI         S+   L L ++++    DV T      ++++ L  
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY----GTLIKGLCG 186

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G+I+ A  L Q M+      D+       ++    PN  +++II++ L K G+ D A  
Sbjct: 187 TGNINIALKLHQEMLN-----DISR-----YEINCKPNVITYNIIVDGLCKVGREDEAKQ 236

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EM   G + ++  YN+LI G C + + EES  LL EM + G +P   T N +   LC
Sbjct: 237 LFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLC 296

Query: 406 RRQDV-------------------------------VGALNLVRKMRV----QGHEPWVK 430
           +   V                               VG LN  R++ V    +G EP V 
Sbjct: 297 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 356

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +LI    K  K  EA +   +M+  G  P+++ Y + + G+    +VD A +LF  +
Sbjct: 357 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 416

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            AHG   +   Y I + GLCK   + EA  LF E+ +      +   N LI+G CK+G +
Sbjct: 417 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 476

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           + A     + L  E   P+V+TYT +I G C  G+ D A +L  +ME  GC P+ IT+  
Sbjct: 477 ETAWELFEK-LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L+ G  + ++    +     M +K + PD
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPD 564



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 232/503 (46%), Gaps = 56/503 (11%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL  F  M +S      + ++ ++ GL K K       LY++M+ SG++           
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS----------- 101

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIAD 307
             SD   L +L+  +     +         I+R   S   +   YN L++ +     I++
Sbjct: 102 --SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIV--TYNTLIKGLCMEHRISE 157

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM------TQIGCMQNVFL 361
                L + K   +P+  ++  +I  L   G +++AL L +EM       +I C  NV  
Sbjct: 158 ATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVIT 217

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN ++DGLC   R +E+ +L  EM+  G  P+  + NS+    C       +  L+ +M 
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 277

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            QG +P +    +LI  LCK GK +EA + L  M++ G +PD+V Y++ I G   +  ++
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A ELF  + + GC PDV++YN++I+G  K  +V EA  L+NEM+  G  P+V TY+ L+
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397

Query: 542 NGWCKSGNIDQAMLCLSRM----------------------------------LEKESGS 567
            G   +G +D A    S M                                  L+  +  
Sbjct: 398 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 457

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            ++     LIDGLC AG+ + A  L+ ++  +G  PN +T+  +I G C+  +   A V 
Sbjct: 458 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 517

Query: 628 FRMMKEKGMKPDMFVFVALISAF 650
            + M+  G  PD+  +  L+  F
Sbjct: 518 IQKMEANGCTPDIITYNTLMRGF 540



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 164/330 (49%), Gaps = 7/330 (2%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL  F  M +     ++  +N+L+ GL       + + L  +M  SG      TLN +  
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           CLC    +         +  +G+ P +     LIK LC   +  EA R    M + G  P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 463 DIVCYSAAIGGLIDIKRVDLAL----ELFRDICAH--GCCPDVVAYNIIISGLCKAQRVA 516
           D+V Y   I GL     +++AL    E+  DI  +   C P+V+ YNII+ GLCK  R  
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA+ LF EM T+G+IPS+ +YN LI+G+C +G  +++   L  ML+ +   PD++T+  L
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLD-QGLQPDMVTFNVL 291

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID LC  G+  +A  L   M E G  P+ +T+ +LI G C      +A   F  M  KG 
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +PD+  +  LI+ +   L    A ++  EM
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEM 381



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 246/574 (42%), Gaps = 27/574 (4%)

Query: 17  LAQDVVKSRCFMSPGA-LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           L+     S    SP   + F +R   +  +     + F  +       P+  S+N LL  
Sbjct: 19  LSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSG 78

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           L K      V     +M+  G   D+ TL  LL   CN  +  +  + F  I+  G+   
Sbjct: 79  LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPN 138

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            V ++ L+        + +A  L  RM       +  T+  LI G      ++ AL+L  
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198

Query: 195 KMTKS------GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           +M             +   Y++I+ GLCK  + + A QL+ EMK  G+ P     + LI 
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH 258

Query: 249 S--CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
              C+ + E +  + +   D+ +    +  N ++  L   G + +A  LL  MI+     
Sbjct: 259 GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES---- 314

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        + P+  +++ +I      G L+ A  LF  M   GC  +V  YN LI
Sbjct: 315 ------------GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +G   + ++EE+ +L  EM   G +P   T +S+ + +     V  A  L   M+  G  
Sbjct: 363 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 422

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                  + +  LCK+    EA +  T++    F  +I   +  I GL    +++ A EL
Sbjct: 423 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 482

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  +   G  P+VV Y I+I G C+  +V +A  L  +M   G  P + TYN L+ G+ +
Sbjct: 483 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 542

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           S  +++ +  L RM +K+  SPD IT + ++D L
Sbjct: 543 SNKLEEVVQLLHRMAQKDV-SPDAITCSIVVDML 575



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 182/387 (47%), Gaps = 20/387 (5%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L  VG  +EA  LF+++K +G+ +P+  SYN L+   C +   +  +  L EM D G   
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGM-IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
           D  T   L+   C  G+  +A  +   +I+ G V + V ++ L+  F   G+++ A EL 
Sbjct: 284 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 343

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M       +  ++ VLI+G+ K  +V++A++L+++M   G   +   YD ++ G+   
Sbjct: 344 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 403

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL--C 276
            +++ A +L+S MK  GI  +       +        L   +K   E +  N    +   
Sbjct: 404 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++  L   G ++ A+ L       E +++ G E          PN  ++ I+I+   +
Sbjct: 464 NCLIDGLCKAGKLETAWELF------EKLSNEGHE----------PNVVTYTIMIHGFCR 507

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +G++D A  L ++M   GC  ++  YN L+ G   SN+LEE  +LL  M +    P   T
Sbjct: 508 EGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            + +   L + +     L+L+ +  +Q
Sbjct: 568 CSIVVDMLSKDEKYQECLHLLPRFPIQ 594



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 103/219 (47%), Gaps = 9/219 (4%)

Query: 440 CKHGK--AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
           CK G   A  A  F   M++    P +  ++  + GL  IK       L+  +   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D    NI+++ LC   R+ E    F  ++ +G  P++ TYN LI G C    I +A    
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM------EEKGCAPNRITFMAL 611
            RM +K   +PDV+TY TLI GLC  G  + A+ L  EM       E  C PN IT+  +
Sbjct: 163 LRM-QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + GLCK  R   A   F  MK +GM P +  + +LI  F
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 219/484 (45%), Gaps = 20/484 (4%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R++ A    + M   G   D      ++  LCK+ ++  A ++   M GSG TPD    +
Sbjct: 77  RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 245 KLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            L+ +    G +   ++  E  E+    T T+  NS++R L  +G++ Q+  +L   +K 
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMK- 195

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG V PN  ++  ++    K+   D A+ L  E+   G   N+  Y
Sbjct: 196 --------------KGLV-PNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY 240

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L+ GLC   R EE+ +  R++   GF P   + N + R LC       A  L+ +M  
Sbjct: 241 NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG 300

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
               P +    +LI  L  HG+  +A   L DM +  F      Y+  I  L    +VDL
Sbjct: 301 GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL 360

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            ++    +    C P+   YN I + LC+  +V EA  +   +  K    +   Y  +I+
Sbjct: 361 VVKCLDQMMYRRCNPNEGTYNAI-AVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVIS 419

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C+ GN   A   L  M  K    PD  TY++LI GLC  G  D+A+ +++ MEE  C 
Sbjct: 420 SLCRKGNTYPAFQLLYEM-TKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCR 478

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+   F ALI GLCKC +   +L+ F MM +KG  P+   +  ++     +    LA  V
Sbjct: 479 PDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAV 538

Query: 663 LKEM 666
           LKE+
Sbjct: 539 LKEL 542



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 213/483 (44%), Gaps = 22/483 (4%)

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVA-F 145
           + L+ M   G   D    T L+   C S +  KA  V   +I  G   +      LV   
Sbjct: 83  LYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNL 142

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G V  A +L+E+M++     N  T+  L+ G      + ++LQ+ DK  K G   + 
Sbjct: 143 CKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNV 202

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y  ++    K +  + A++L  E+   G  P+    + L+T    EG  T    + + 
Sbjct: 203 FTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGR-TEEAMQFFR 261

Query: 266 D---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           D   +  +   +  N ++R L   G  ++A  LL  M  GE                 SP
Sbjct: 262 DLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGE----------------RSP 305

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  +F+I+I +L   G+ D AL +  +M++         YN +I  LC   +++   + L
Sbjct: 306 SIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCL 365

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M      P   T N++   LC    V  A ++++ +  + +         +I  LC+ 
Sbjct: 366 DQMMYRRCNPNEGTYNAI-AVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRK 424

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    AF+ L +M + GF+PD   YS+ I GL     +D A+E+F  +  + C PDV  +
Sbjct: 425 GNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNF 484

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N +I GLCK ++   +  +F  M+ KG +P+  TY +++ G      ++ A   L  +  
Sbjct: 485 NALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYL 544

Query: 563 KES 565
           +++
Sbjct: 545 RQA 547



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 51/464 (10%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  S   L+  LCK  +V      +++M++YG+  +  T   L++  C  G   ++L 
Sbjct: 129 TPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQ 188

Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + ++ +  G V     +S LL A  K    D+A  L++ +     + N  ++ VL+ G  
Sbjct: 189 ILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLC 248

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K+ R ++A+Q F  +   GF+ +   Y++++  LC   + E A +L +EM G   +P   
Sbjct: 249 KEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIV 308

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI S                                 L  +G  DQA  +L  M +
Sbjct: 309 TFNILIGS---------------------------------LALHGQTDQALEVLDDMSR 335

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                         FK T     +S++ II  L K+GK+DL +    +M    C  N   
Sbjct: 336 AR------------FKATA----ASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGT 379

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y N I  LC   +++E++ +++ +       TH     +   LCR+ +   A  L+ +M 
Sbjct: 380 Y-NAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMT 438

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
             G  P     + LI+ LC  G   EA    + M +    PD+  ++A I GL   ++ D
Sbjct: 439 KYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTD 498

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
           L+L +F  +   G  P+   Y II+ G+   + +  A  +  E+
Sbjct: 499 LSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 192/418 (45%), Gaps = 63/418 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L   G + ++  + D+  ++GL VPN ++Y+ LLEA  K    D     L E+   
Sbjct: 173 LVRGLCMHGNLSQSLQILDKFMKKGL-VPNVFTYSFLLEAAYKERGADEAIRLLDEIVAK 231

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   +  +   LL   C  G+ ++A+  F ++   G+    V ++ILL +    G  +KA
Sbjct: 232 GGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKA 291

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+  MD      +  TF +LI       + D+AL++ D M+++ F + AA Y+ II  
Sbjct: 292 KELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIAR 351

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK  ++++ ++   +M      P             +EG               N + +
Sbjct: 352 LCKEGKVDLVVKCLDQMMYRRCNP-------------NEG-------------TYNAIAV 385

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI---II 331
           LC          G + +A++++Q++   +                   N+S+ D    +I
Sbjct: 386 LC--------EEGKVQEAFSIIQSLGNKQ-------------------NSSTHDFYKGVI 418

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           ++L + G    A  L  EMT+ G + + + Y++LI GLC+   L+E+ E+   MEE+  +
Sbjct: 419 SSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCR 478

Query: 392 PTHFTLNSMF--RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
           P     N++    C CR+ D+  +L +   M  +G+ P     T++++ +  H + ME
Sbjct: 479 PDVDNFNALILGLCKCRKTDL--SLMVFEMMVKKGYMPNETTYTIIVEGIA-HQEEME 533


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 220/487 (45%), Gaps = 51/487 (10%)

Query: 117 FDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            D ALS FN ++  H       F+ LL + +K         L  +MD   I  +  T  +
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F    R+  A  +  K+ K G   D   ++ +I GLC   ++  AL L+ +  G G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             PD                             V T   L N + ++    G+   A  L
Sbjct: 213 FQPD-----------------------------VVTYGTLMNGLCKV----GNTSAAIRL 239

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L++M++                    PN  +++ II++L KD ++  A +LF EM   G 
Sbjct: 240 LRSMVQKN----------------CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI 283

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++F YN+LI  LCN    +    LL EM  S   P     +++   LC+   +  A +
Sbjct: 284 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHD 343

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +V  M  +G EP V   T L+   C   +  EA +    MV +G +P++  Y+  I G  
Sbjct: 344 VVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC 403

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            I+R+D A+ L   +   G   D V YN +I GLC   R+  A  LF+EM+  G IP + 
Sbjct: 404 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 463

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY +L++  CK+ ++ +AM+ L + +E  +   D++ Y   IDG+C AG  + A  L++ 
Sbjct: 464 TYRILLDYLCKNHHLAEAMVLL-KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 522

Query: 596 MEEKGCA 602
           +  +G A
Sbjct: 523 LSCQGFA 529



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 203/446 (45%), Gaps = 25/446 (5%)

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
           + +D AL  F++M           +  ++  + K K     L L ++M   GI PD   L
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 244 SKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           + LI S      L    ++L K +      +  T   N+++R L   G I +A +L    
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTF--NTLIRGLCVEGKIGEALHLFDKT 208

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I GE                  P+  ++  ++N L K G    A+ L R M Q  C  NV
Sbjct: 209 I-GEGF---------------QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV 252

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN +ID LC   ++ E++ L  EM   G  P  FT NS+   LC   +      L+ +
Sbjct: 253 IAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 312

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M      P V   + ++  LCK G    A   +  M++ G  PD+V Y+A + G      
Sbjct: 313 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 372

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+++F  +   GC P+V +YNI+I+G C+ QR+ +A  L  +M  +GLI    TYN 
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
           LI+G C  G +  A+     M+   SG  PD++TY  L+D LC      +A++L   +E 
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMV--ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 490

Query: 599 KGCAPNRITFMALITGLCKCDRPRAA 624
                + + +   I G+C+     AA
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAA 516



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 162/329 (49%), Gaps = 1/329 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+T  F  ++ ++ K       LSL  +M   G   +V+  N LI+  C+  RL  ++ +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L ++ + G +P + T N++ R LC    +  AL+L  K   +G +P V     L+  LCK
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A R L  MVQ+   P+++ Y+  I  L   ++V  A  LF ++   G  PD+  
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I  LC          L NEM+   ++P+V  ++ +++  CK G I  A   +  M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    PDV+TYT L+DG C+    D+A+ +++ M  KGC PN  ++  LI G C+  R 
Sbjct: 350 -KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A+     M  +G+  D   +  LI   
Sbjct: 409 DKAMGLLEQMSLQGLIADTVTYNTLIHGL 437



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 1/328 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           + P+  + +I+IN+     +L  A S+  ++ ++GC  +   +N LI GLC   ++ E+ 
Sbjct: 143 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEAL 202

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            L  +    GF+P   T  ++   LC+  +   A+ L+R M  +   P V     +I  L
Sbjct: 203 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 262

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  EAF   ++M+ +G  PDI  Y++ I  L ++        L  ++      P+V
Sbjct: 263 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 322

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V ++ ++  LCK   +A A D+ + MI +G+ P V TY  L++G C    +D+A+     
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+ K    P+V +Y  LI+G C   R D A+ L  +M  +G   + +T+  LI GLC   
Sbjct: 383 MVHKGC-VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALI 647
           R + A+  F  M   G  PD+  +  L+
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILL 469



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD ALS F  M  +    +   +  L+  +           L  +M+  G  P  +TLN 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C  + +  A +++ K+   G +P       LI+ LC  GK  EA       + EG
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F PD+V Y   + GL  +     A+ L R +    C P+V+AYN II  LCK ++V EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +LF+EMITKG+ P + TYN LI+  C           L+ M+  +   P+V+ ++T++D 
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI-MPNVVVFSTVVDA 331

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  G    A  + + M ++G  P+ +T+ AL+ G C       A+  F  M  KG  P+
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 640 MFVFVALISAF 650
           +  +  LI+ +
Sbjct: 392 VRSYNILINGY 402



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 196/435 (45%), Gaps = 21/435 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  LL ++ K      V     +M  +G   D YTL  L+  +C+  +   A SV
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +++  G   D   F+ L+      G++ +A  L ++      + +  T+  L++G  K
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A++L   M +     +   Y+ II  LCK++Q+  A  L+SEM   GI+PD   
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 243 LSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + LI +  +  E   +T L+ E+   + +  + +  ++++  L   G I  A++++  M
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF-STVVDALCKEGMIAIAHDVVDMM 348

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           IK       GVE          P+  ++  +++      ++D A+ +F  M   GC+ NV
Sbjct: 349 IKR------GVE----------PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LI+G C   R++++  LL +M   G      T N++   LC    +  A+ L  +
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P +    +L+  LCK+    EA   L  +       DI+ Y+ AI G+     
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 480 VDLALELFRDICAHG 494
           ++ A +LF ++   G
Sbjct: 513 LEAARDLFSNLSCQG 527



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 120/255 (47%), Gaps = 3/255 (1%)

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           AL+   +M      P     T L+  + K           T M   G  PD+   +  I 
Sbjct: 96  ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 155

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
               ++R+  A  +   +   GC PD   +N +I GLC   ++ EA  LF++ I +G  P
Sbjct: 156 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 215

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V TY  L+NG CK GN   A+  L  M++K    P+VI Y T+ID LC   +  +A  L
Sbjct: 216 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNC-RPNVIAYNTIIDSLCKDRQVTEAFNL 274

Query: 593 WNEMEEKGCAPNRITFMALITGLCK-CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           ++EM  KG +P+  T+ +LI  LC  C+      +   M+  K M P++ VF  ++ A  
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM-PNVVVFSTVVDALC 333

Query: 652 SELNPPLAFEVLKEM 666
            E    +A +V+  M
Sbjct: 334 KEGMIAIAHDVVDMM 348



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 122/279 (43%), Gaps = 5/279 (1%)

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           N L+++      M      P+      +   + + +     L+L  +M   G  P V   
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI   C   +   AF  L  +++ G  PD   ++  I GL    ++  AL LF     
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  PDVV Y  +++GLCK    + A  L   M+ K   P+V  YN +I+  CK   + +
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A    S M+ K   SPD+ TY +LI  LC          L NEM      PN + F  ++
Sbjct: 271 AFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 613 TGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVALISA 649
             LCK      A+ H    MM ++G++PD+  + AL+  
Sbjct: 330 DALCK--EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 366



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 166/402 (41%), Gaps = 54/402 (13%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+N ++N L+  LC       VE                            G+  +AL
Sbjct: 178 CQPDNTTFNTLIRGLC-------VE----------------------------GKIGEAL 202

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F++ I  G+  + V +  L+    K G    A  L+  M   N R N   +  +I   
Sbjct: 203 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 262

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  +V +A  LF +M   G + D   Y+ +I  LC   + +    L +EM  S I P+ 
Sbjct: 263 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 322

Query: 241 EILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + S ++ +   EG + +   V ++   R V    +   ++M        +D+A  +   
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M+                KG V PN  S++I+IN   +  ++D A+ L  +M+  G + +
Sbjct: 383 MVH---------------KGCV-PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 426

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              YN LI GLC+  RL+ +  L  EM  SG  P   T   +   LC+   +  A+ L++
Sbjct: 427 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 486

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            +     +  +    + I  +C+ G+   A    +++  +GF
Sbjct: 487 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 152/358 (42%), Gaps = 51/358 (14%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G L+  L  VG    A  L   + ++  C PN  +YN ++++LCK   V        EM 
Sbjct: 221 GTLMNGLCKVGNTSAAIRLLRSMVQKN-CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G   D +T   L+   CN  ++    ++ NE+++   + +  VFS ++ A  K G + 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A ++++ M    +  +  T+  L+ G   +S +D+A+++FD M   G   +   Y+++I
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 399

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
            G C+ ++++ A+ L  +M   G+  D                                 
Sbjct: 400 NGYCQIQRMDKAMGLLEQMSLQGLIAD--------------------------------- 426

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T+  N+++  L   G +  A  L   M+    I                P+  ++ I+++
Sbjct: 427 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI----------------PDLVTYRILLD 470

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            L K+  L  A+ L + +       ++ +YN  IDG+C +  LE + +L   +   GF
Sbjct: 471 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 1/187 (0%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D AL  F  +      P  V +  +++ + K +  +    L  +M + G+ P V T N+
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LIN +C    +  A   L+++L K    PD  T+ TLI GLC+ G+  +A+ L+++   +
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLL-KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P+ +T+  L+ GLCK     AA+   R M +K  +P++  +  +I +   +     A
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271

Query: 660 FEVLKEM 666
           F +  EM
Sbjct: 272 FNLFSEM 278



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 2/159 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +FD +  +G CVPN  SYN L+   C+   +D     L++M   G   D  T  
Sbjct: 373 MDEAVKVFDTMVHKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 431

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C+ G+   A+++F+E++  G + + V + ILL    K   + +A  L++ ++  
Sbjct: 432 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 491

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
           N+  +   + + I G  +   ++ A  LF  ++  GFA+
Sbjct: 492 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 234/490 (47%), Gaps = 24/490 (4%)

Query: 183 KSRVDKALQLFDKM--TKSGFASDAAM-YDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           +SRV     +F ++  T+    + +++ +D++I   C+ K+ + A + +  MK  G+ P 
Sbjct: 141 ESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPK 200

Query: 240 FEILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            E  + +++     +    + +L  E++  + + +     N ++ +L   G + +A + +
Sbjct: 201 IETFNAMLSLFLKLNQTETVWVLYAEMFRLK-IKSTVYTFNIMINVLCKEGKLKKAKDFI 259

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            +M       ++GV+          PN  +++ +I+     G+++ A  +   M   G  
Sbjct: 260 GSM------ENLGVK----------PNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVE 303

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + + Y +LI G+C   +LEE+  +L +M+E G  PT  T N++    C + D+V A   
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +   P V    LLI  L   GK  EA   + DM   G +PD + Y+  I G   
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
                 A  L  ++ + G  P +V Y  +I  L K  R+  A+DLF ++I +G  P +  
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           +N LI+G C +GN+D+A   L  M +K +  PD +TY TL+ G C  G+ ++A  L  EM
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEM-DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           + +G  P+ I++  LI+G  K      A      M   G  P +  + ALI         
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602

Query: 657 PLAFEVLKEM 666
            LA E+LKEM
Sbjct: 603 DLAEELLKEM 612



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 218/489 (44%), Gaps = 22/489 (4%)

Query: 167 RLNEKT---FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           RL  K+   F +LI    +  R D A + FD M + G       ++ ++    K  Q E 
Sbjct: 160 RLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTET 219

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
              LY+EM    I       + +I     EG+L      I   E+  V    +  N+++ 
Sbjct: 220 VWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIH 279

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
              S G ++ A  +L  M       + GVE          P++ ++  +I+ + K GKL+
Sbjct: 280 GYCSRGRVEGARMVLDIM------KNRGVE----------PDSYTYGSLISGMCKGGKLE 323

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +  +M +IG +     YN LIDG CN   L +++    EM      PT  T N + 
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L     +  A  +++ M   G  P      +LI   C+ G A +AF    +M+ +G  
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P +V Y++ I  L    R+  A +LF  I   G  PD++ +N +I G C    +  A  L
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL 503

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             EM  + ++P   TYN L+ G C+ G +++A   L  M ++    PD I+Y TLI G  
Sbjct: 504 LKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM-KRRGIRPDHISYNTLISGYS 562

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             G  +DA  + +EM   G  P  +T+ ALI GLCK  +   A    + M  KG+ PD  
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622

Query: 642 VFVALISAF 650
            + +LI   
Sbjct: 623 TYFSLIEGI 631



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 227/490 (46%), Gaps = 19/490 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+ A  +    D A E  + M +  +    +TF  ++  F+K ++ +    L+ +M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            +    S    ++++I  LCK  +L+ A      M+  G+ P+    + +I      G  
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E   +V +I ++R V   +    S++  +   G +++A  +L+ M       ++G+    
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM------KEIGL---- 337

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  P   +++ +I+     G L  A     EM +   +  V  YN LI  L    +
Sbjct: 338 ------LPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           ++E+  ++++M +SG  P   T N +    CR  +   A NL  +M  +G +P +   T 
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  L K  +   A      +++EG  PD++ ++A I G      +D A  L +++    
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD V YN ++ G C+  +V EA +L  EM  +G+ P   +YN LI+G+ K G+I+ A 
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                ML     +P ++TY  LI GLC   + D A  L  EM  KG  P+  T+ +LI G
Sbjct: 572 TIRDEMLSI-GFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630

Query: 615 LCKCDRPRAA 624
           + K D    A
Sbjct: 631 IGKVDDSSEA 640



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 203/424 (47%), Gaps = 26/424 (6%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + F+I++    K G++ KA + I  M++  ++ N  T+  +IHG+  + RV+ A  + D 
Sbjct: 237 YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDI 296

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   D+  Y  +I G+CK  +LE A  +  +MK  G+ P     + LI    ++G+
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356

Query: 256 LTLLVKEI-WEDRDVNTMTLLCNSIMRILVS----NGSIDQAYNLLQAMIKGEPIADVGV 310
           L   VK   + D  V    L   S   +L+      G +D+A  +++ M       D G+
Sbjct: 357 L---VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM------GDSGI 407

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P++ +++I+IN   + G    A +L  EM   G    +  Y +LI  L 
Sbjct: 408 ----------VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WV 429
             NR++ + +L  ++   G  P     N++    C   ++  A  L+++M  +   P  V
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +NTL+ +  C+ GK  EA   L +M + G  PD + Y+  I G      ++ A  +  +
Sbjct: 518 TYNTLM-QGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDE 576

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + + G  P ++ YN +I GLCK Q+   AE+L  EM++KG+ P  +TY  LI G  K  +
Sbjct: 577 MLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636

Query: 550 IDQA 553
             +A
Sbjct: 637 SSEA 640


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 164/633 (25%), Positives = 278/633 (43%), Gaps = 40/633 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF ++ R G+ VP  ++ N LL+   +SC  ++V     EM+ +    D ++L  + +  
Sbjct: 177 LFGELCRLGV-VPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSL 235

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
               + DKA  V+ E+I+ G   D H  S  ++   + G++D A  +++ +    +++  
Sbjct: 236 FQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEA 295

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             F V++ G  K+ R+++  +L +   + G   D   Y  +I   CK   L   L  Y  
Sbjct: 296 IAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQA 355

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGS 288
           M   G+  +  I+S L+   +  G  + + +   + RD  ++   +L N  M      G+
Sbjct: 356 MVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGN 415

Query: 289 IDQAYNLLQAM---------------IKGE----PIADVGVEMLMIFKGTVSPNTSSFDI 329
           +D+A  LL  M               IKG      I +       + K  V P+  +++I
Sbjct: 416 MDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNI 475

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           + + L K G +     L   M   G   N   Y  +IDG C  + L E+  L   +EE G
Sbjct: 476 LASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKG 535

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                   +SM      +     A  L  ++  QG        + LI +LC+ G +  A 
Sbjct: 536 IDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGAS 595

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
              + M+++  +PD++ YS  I        +  A   F D+   G   DV+ Y ++++G 
Sbjct: 596 TVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGY 655

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLING---------WCKSGNIDQAMLC---- 556
           CK   + EA +LF +M + G+ P +  Y +L++G         W       +++L     
Sbjct: 656 CKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQ 715

Query: 557 ---LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              LS M E E   PDV  YT LIDG C +   + A  L++EM +KG  P+   + ALI 
Sbjct: 716 NRLLSSMKEMEI-EPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALIN 774

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           G C       A   F+ M +KG+KPD+  F  L
Sbjct: 775 GYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 237/545 (43%), Gaps = 44/545 (8%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           Q++++ +  +   A   ++  L     +EE   L +   R+GL  P+ Y Y+ L+ + CK
Sbjct: 284 QEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGL-TPDIYGYSYLIRSYCK 342

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
             ++  V    + M  +G   + + ++ LLQ +   G   +    F +  D G  +D  +
Sbjct: 343 VGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVL 402

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++I + A+ K G +D+A +L+  M    +  +   +  LI G+  K  +  A Q F++M 
Sbjct: 403 YNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEML 462

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K+    D   Y+++  GL K   +     L   M+  G+ P+      +I        L+
Sbjct: 463 KANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLS 522

Query: 258 L--LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-------- 307
              ++  I E++ ++ + +L +S++   +  G  D AY L   + K   + D        
Sbjct: 523 EAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLI 582

Query: 308 ------------VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
                         V   M+ K  V P+  S+  +I+   + G +  A   F +M Q G 
Sbjct: 583 SDLCRDGNSQGASTVCSTMLEKNDV-PDLISYSKLISAYCQTGDMRNARLWFHDMVQRGL 641

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V +Y  L++G C    ++E+ EL  +M   G KP       +           G L 
Sbjct: 642 PVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLD---------GHLK 692

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
              + R QG        +LL++         +  R L+ M +    PD+ CY+  I G  
Sbjct: 693 EDLQRRWQGISR--DKRSLLLRA--------KQNRLLSSMKEMEIEPDVPCYTVLIDGQC 742

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
               ++ A  LF ++   G  PD  AY  +I+G C    VA+AEDLF EM+ KG+ P V 
Sbjct: 743 KSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVL 802

Query: 536 TYNLL 540
           T+++L
Sbjct: 803 TFSVL 807



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 206/506 (40%), Gaps = 64/506 (12%)

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           L  +D+M       DA    +I   L + K+ + A +++ EM   G+ PD    S  I  
Sbjct: 210 LSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIG 269

Query: 250 CSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
             + G++ L   +++EI  ++ V    +  N +M  L     +++   LL+  ++     
Sbjct: 270 LCECGKIDLAYAILQEIIREK-VQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQ---- 324

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+   +  +I +  K G L   L  ++ M   G   N  + + L+
Sbjct: 325 ------------GLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLL 372

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
                     +  E  ++  +SG        N      C+  ++  A+ L+ +M   G  
Sbjct: 373 QCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLS 432

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P   H T LIK  C  G    A +   +M++    PD+V Y+    GL    +  L +E+
Sbjct: 433 PDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGL---SKRGLVMEV 489

Query: 487 FRDICAH----GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI- 541
           F D+  H    G  P+ + Y ++I G C+   ++EAE LFN +  KG+      Y+ ++ 
Sbjct: 490 F-DLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVC 548

Query: 542 ----NGW------------------------------CKSGNIDQAMLCLSRMLEKESGS 567
                GW                              C+ GN   A    S MLEK    
Sbjct: 549 GYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKND-V 607

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD+I+Y+ LI   C  G   +A + +++M ++G   + I +  L+ G CK    + A   
Sbjct: 608 PDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACEL 667

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
           F  M   G+KPD+  +  L+   L E
Sbjct: 668 FAQMTSLGIKPDIIAYTVLLDGHLKE 693



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 230/578 (39%), Gaps = 91/578 (15%)

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKS------RVDKALQLFDKMTKSGFASDAAMYDVII 212
           ER++     L E+  C L    V K+      R   A   F      GF  D + Y  I+
Sbjct: 48  ERLNFAANELAERRSCPLSPANVVKTLQCLKRRPAIAFAYFKDAESVGFRHDFSTYAEIV 107

Query: 213 GGLCKNKQLEMALQLYSEM------KGSGITPDFEILSK--------------LITSCSD 252
             L  + Q  M   L+ E+       G  I P  + L +              LIT+C+ 
Sbjct: 108 HILSHSGQGRMLFSLFCEIVSPTSGGGPEIVPLMDQLKRTCTTSYPLLFATNCLITACTT 167

Query: 253 ----------EGELTLL--VKEIWE------------DRDVNTMTLLCNSIMRILVSNGS 288
                      GEL  L  V  +W             D ++           R+ +   S
Sbjct: 168 CCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHS 227

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +      L    K +    V VEM+ +    V P+       I  L + GK+DLA ++ +
Sbjct: 228 LRIITRSLFQEKKADKAFKVWVEMIEM---GVKPDVHGHSSFIIGLCECGKIDLAYAILQ 284

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           E+ +         +N ++DGLC   RLEE  +LL      G  P  +  + + R  C+  
Sbjct: 285 EIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVG 344

Query: 409 DVVGALNLVRKMRVQG------------------------------------HEPWVKHN 432
           +++  L+  + M   G                                    H   V +N
Sbjct: 345 NLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYN 404

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            + +   CK G   EA + L +M+  G  PD + Y+  I G      +  A + F ++  
Sbjct: 405 -IAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLK 463

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               PDVV YNI+ SGL K   V E  DL   M  +GL P+  TY ++I+G+C+  N+ +
Sbjct: 464 ANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSE 523

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A +  + + EK   + +V+ Y++++ G    G  D+A +L+  + ++G   +R +   LI
Sbjct: 524 AEVLFNIVEEKGIDNIEVL-YSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLI 582

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + LC+    + A      M EK   PD+  +  LISA+
Sbjct: 583 SDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAY 620



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 158/372 (42%), Gaps = 36/372 (9%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L   GLV E   L   ++  GL  PN+ +Y  +++  C+  ++   E+    +++ G   
Sbjct: 480 LSKRGLVMEVFDLIGHMEDRGL-QPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDN 538

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELI 158
            +   + ++  Y + G  D A  +F  +   G  VD    S L+    + G    A  + 
Sbjct: 539 IEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVC 598

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M + N   +  ++  LI  + +   +  A   F  M + G   D  +Y V++ G CK 
Sbjct: 599 STMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKI 658

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
             ++ A +L+++M   GI PD    + L+     +G L   ++  W+    +  +LL  +
Sbjct: 659 GLMQEACELFAQMTSLGIKPDIIAYTVLL-----DGHLKEDLQRRWQGISRDKRSLLLRA 713

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                       +   LL +M + E                + P+   + ++I+   K  
Sbjct: 714 ------------KQNRLLSSMKEME----------------IEPDVPCYTVLIDGQCKSD 745

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L+ A  LF EM Q G   + + Y  LI+G C+   + ++ +L +EM + G KP   T +
Sbjct: 746 YLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFS 805

Query: 399 SMFRCLCR-RQD 409
            + R + R RQD
Sbjct: 806 VLNRRVLRNRQD 817


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 266/585 (45%), Gaps = 62/585 (10%)

Query: 64  PNNYSYNCLLEALCK---SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           PN  + N L++AL +     SV L +    ++   G   +  T   L+   C   +  +A
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           + +  ++       ++V ++ +L    K G++++A +L+  M +  +  N  TF +L+ G
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K   + +A ++ D M ++    D   Y  +IGGLCK+ +++ A +L  EM+   + P 
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               + LI  C +                       C+S ++                  
Sbjct: 188 VVTYNMLINGCFE-----------------------CSSSLK------------------ 206

Query: 300 IKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                    G E++   +G  V PN  ++++++   +K+GK+D A +  R+M + G   +
Sbjct: 207 ---------GFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPD 257

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N L +G C + RL E++ ++ EM   G K    TLN++   LC  + +  A  L+ 
Sbjct: 258 CVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLS 317

Query: 419 KMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
               +G+    V + TL++    K GK+        +M ++  +P I+ Y   IGGL   
Sbjct: 318 SASKRGYFVDEVSYGTLIMGYF-KVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRS 372

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            + D +++   ++   G  PD   YN II G C+  +V +A    N+M+ K   P + T 
Sbjct: 373 GKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTC 432

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N+L+ G C  G +D+A+      + K   + D +T+ T+I GLC  GR ++A  L  EME
Sbjct: 433 NILVRGLCTEGMLDKALKLFKTWISK-GKAIDAVTFNTIISGLCEEGRFEEAFDLLAEME 491

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           EK   P+  T  A+++ L    R + A      + E+G   D  +
Sbjct: 492 EKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI 536



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 231/517 (44%), Gaps = 83/517 (16%)

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           + +N  TF +LI G   ++++ +A+ L  KM       D   Y+ I+  LCK  +L  A 
Sbjct: 44  VEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEAR 103

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
            L  +MK +G+ P+                              NT  +L +   ++   
Sbjct: 104 DLLLDMKNNGLFPN-----------------------------RNTFNILVSGYCKL--- 131

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G + +A  ++  M +                  V P+  ++  +I  L KDGK+D A  
Sbjct: 132 -GWLKEAAEVIDIMARN----------------NVLPDVRTYTTLIGGLCKDGKIDEAFR 174

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM  +  + +V  YN LI+G    +   + +EL+ EME  G KP   T N + +   
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234

Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           +   +  A N +RKM   G  P  V  NTL     CK G+  EAFR + +M ++G   + 
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTL-SNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293

Query: 465 VCYSAAIGGLIDIKRVDLALEL---------FRDICAHGC-------------------- 495
           V  +  +  L   +++D A +L         F D  ++G                     
Sbjct: 294 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEK 353

Query: 496 --CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              P ++ Y  +I GLC++ +  ++ D  NE++  GL+P   TYN +I G+C+ G +D+A
Sbjct: 354 EIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKA 413

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
               ++M++K S  PD+ T   L+ GLC  G  D A+ L+     KG A + +TF  +I+
Sbjct: 414 FHFRNKMVKK-SFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIIS 472

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           GLC+  R   A      M+EK + PD +   A++SA 
Sbjct: 473 GLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSAL 509



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 250/566 (44%), Gaps = 50/566 (8%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+N SYN +L+ LCK   ++     L +M++ G   ++ T   L+  YC  G   +A 
Sbjct: 79  CFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAA 138

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            V + +  +  + D   ++ L+    K G++D+A  L + M++  +  +  T+ +LI+G 
Sbjct: 139 EVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGC 198

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + S   K  +L D+M   G   +A  Y+V++    K  +++ A     +M+ SG +PD 
Sbjct: 199 FECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC 258

Query: 241 EILSKLITSCSDEGELTLLVKEIWE----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
              + L       G L+   + + E       +N++TL  N+I+  L     +D AY LL
Sbjct: 259 VTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL--NTILHTLCGERKLDDAYKLL 316

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            +  K     D                  S+  +I    K GK       + EM +   +
Sbjct: 317 SSASKRGYFVD----------------EVSYGTLIMGYFKVGK----SXXWDEMKEKEII 356

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  Y  +I GLC S + ++S +   E+ ESG  P   T N++    CR   V  A + 
Sbjct: 357 PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHF 416

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             KM  +  +P +    +L++ LC  G   +A +     + +G   D V ++  I GL +
Sbjct: 417 RNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCE 476

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             R + A +L  ++      PD   +N I+S L  A R+ EAE+  + ++ +G +     
Sbjct: 477 EGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQ---- 532

Query: 537 YNLLINGWCKSGNIDQAMLCLSR-----MLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
                         DQ +    R         +   P+ + ++  I+ LC  G+  DA+ 
Sbjct: 533 --------------DQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMH 578

Query: 592 LWNEMEEKGCAPNRITFMALITGLCK 617
           +  E  +KG   ++ T+++L+ GL K
Sbjct: 579 MIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 167/383 (43%), Gaps = 32/383 (8%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K  V  NT++F+I+I     + KL  A+ L  +M    C  +   YN ++D LC   +
Sbjct: 39  VIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGK 98

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L E+ +LL +M+ +G  P   T N +    C+   +  A  ++  M      P V+  T 
Sbjct: 99  LNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTT 158

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK GK  EAFR   +M     LP +V Y+  I G  +        EL  ++   G
Sbjct: 159 LIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKG 218

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+ V YN+++    K  ++  A +   +M   G  P   T+N L NG+CK+G + +A 
Sbjct: 219 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAF 278

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML---------------------- 592
             +  M  ++    + +T  T++  LC   + DDA  L                      
Sbjct: 279 RMMDEM-SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337

Query: 593 ---------WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
                    W+EM+EK   P+ IT+  +I GLC+  +   ++     + E G+ PD   +
Sbjct: 338 YFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTY 397

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             +I  +  E     AF    +M
Sbjct: 398 NTIILGYCREGQVDKAFHFRNKM 420



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 435 LIKELCKHGKAMEAF---RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
           LIK L ++      +      +D+++ G   +   ++  I G     ++  A+ L   + 
Sbjct: 16  LIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMK 75

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
              C PD V+YN I+  LCK  ++ EA DL  +M   GL P+  T+N+L++G+CK G + 
Sbjct: 76  HFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLK 135

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   +  ++ + +  PDV TYTTLI GLC  G+ D+A  L +EME     P+ +T+  L
Sbjct: 136 EAAEVID-IMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNML 194

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I G  +C            M+ KG+KP+   +  ++  ++ E     A   L++M
Sbjct: 195 INGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 249


>gi|296084128|emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 171/692 (24%), Positives = 282/692 (40%), Gaps = 79/692 (11%)

Query: 17  LAQDVVKSRCFMSPGALGF-------LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           L Q VV+     SP            LI  L   G V+EA  +FD ++         + Y
Sbjct: 58  LGQQVVRRMIKQSPSVSDAILAVDKRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLY 117

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
             L   LC+   V+  E+ + EM+  G   DK   T L+  YC   +   A+ VF  ++ 
Sbjct: 118 KTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLK 177

Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G   D + ++ L+  F K G  DK   L  +M +  ++ N  T+ ++I  + ++ +VD 
Sbjct: 178 MGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDC 237

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL L   M+          Y V+I  L K  +L    +LY +M   G+ PD  +   L+ 
Sbjct: 238 ALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQ 297

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-SIDQAYNLLQAMIKGEPIAD 307
                 EL L +K                 I++ +  NG ++D    LL       P  D
Sbjct: 298 KQPKGHELHLALK-----------------ILQAIAKNGCNLDLC--LLSTSATHSPTQD 338

Query: 308 VGVEMLMIFKGTVSPNTS----SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
           V  E+  +    V  N +    +F I I+ L   GK D AL    +M  +GC   +  YN
Sbjct: 339 VEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYN 398

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           +LI  L     +E++  L+  M+E+G  P   T   M    C   D+  A  L+ +M  +
Sbjct: 399 SLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNER 458

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P V     +I  L +  + +EA      M++ G  PD + Y   I G    +R   A
Sbjct: 459 GLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEA 518

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            +LF  +  HG  P   +Y  +ISGL K   + +     ++M+  G +P+   Y  LIN 
Sbjct: 519 RQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQ 578

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC---------------------- 581
           + + G ++ A   L  ++++     D+IT   L+ G+                       
Sbjct: 579 FLRKGELEFAFR-LVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVRE 637

Query: 582 --------------------IAGRPDD----AIMLWNEMEEKGCAPNRITFMALITGLCK 617
                                 G P      A+ L  +++     PN   +  +I+G C+
Sbjct: 638 ILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCR 697

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +  + A  HF +M+ +G+ P+   F  LI+ 
Sbjct: 698 ANMIQDAYNHFELMQTEGVCPNQVTFTILING 729



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 230/531 (43%), Gaps = 59/531 (11%)

Query: 176 LIHGFVKKSRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           LI G   K  VD+A  +FD M  ++G  +   +Y  +  GLC+ +++E A     EM+  
Sbjct: 84  LIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESE 143

Query: 235 GITPDFEILSKLITS-CSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           G   D  + + LI   C  +   T   + ++ +    D +T T   N+++   V  G  D
Sbjct: 144 GHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTY--NTLIHGFVKLGLFD 201

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           + + L   M      ++ G++          PN  ++ I+I    ++GK+D AL+L   M
Sbjct: 202 KGWILHNQM------SEWGLQ----------PNVVTYHIMIRRYCEEGKVDCALTLLSSM 245

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +      +V  Y  LI  L   NRL E  EL ++M + G  P H    ++ +   +  ++
Sbjct: 246 SSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHEL 305

Query: 411 VGALNLVRKMRVQG-------------HEPW--------------VKHN--------TLL 435
             AL +++ +   G             H P               V+ N         + 
Sbjct: 306 HLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIF 365

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LC  GK   A  F+  MV  G  P +  Y++ I  L   + V+ A  L   +  +G 
Sbjct: 366 ISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGI 425

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD+  Y I++   C    +A A  L ++M  +GL PSVA Y+ +I    +   I +A  
Sbjct: 426 VPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAEN 485

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               MLE     PD I Y T+I G     R  +A  L+++M E G  P+  ++ A+I+GL
Sbjct: 486 VFKMMLE-AGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGL 544

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            K +       +   M + G  P+  ++ +LI+ FL +     AF ++  M
Sbjct: 545 VKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLM 595



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 132/616 (21%), Positives = 241/616 (39%), Gaps = 106/616 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +GL ++  +L +Q+   GL  PN  +Y+ ++   C+   VD     L  M  +
Sbjct: 190 LIHGFVKLGLFDKGWILHNQMSEWGL-QPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSF 248

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
                 ++ T L+       +  +   ++ +++D G V +HV F  L+    K  E+  A
Sbjct: 249 NLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLA 308

Query: 155 CELIE-------RMDDC----------------------------NIRLNEKTFCVLIHG 179
            ++++        +D C                            N  L +  F + I  
Sbjct: 309 LKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISA 368

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                + D AL   DKM   G     + Y+ +I  L + + +E A  L   M+ +GI PD
Sbjct: 369 LCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPD 428

Query: 240 FEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
                 ++    + G+L     + +   +R +     + +SI+  L     I +A N+ +
Sbjct: 429 LATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFK 488

Query: 298 AMIKG--EPIADVGVEML------------------MIFKGTVSPNTSSFDIIINTLLKD 337
            M++   +P A + V M+                  MI  G   P++ S+  +I+ L+K+
Sbjct: 489 MMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHG-FQPSSHSYTAVISGLVKE 547

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +D   S   +M + G + N  LY +LI+       LE ++ L+  M+ +  +    T 
Sbjct: 548 NMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITC 607

Query: 398 NSMFRCLCR----------------------------------------------RQDVV 411
            ++   + R                                              R+   
Sbjct: 608 IALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKY 667

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            ALNL++K++     P +     +I   C+     +A+     M  EG  P+ V ++  I
Sbjct: 668 FALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILI 727

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G      +D A+ LF  + A G  PD + YN +I GLCKA R+ +A  + + M  +GL 
Sbjct: 728 NGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLF 787

Query: 532 PSVATYNLLINGWCKS 547
           P+ ++Y  L+   C S
Sbjct: 788 PNKSSYEKLLKCLCAS 803



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 155/380 (40%), Gaps = 15/380 (3%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           LC ++   L+  G +     +++ MIK  P   V   +L + K            +I+ L
Sbjct: 42  LCFTLTDRLIRRGVLSLGQQVVRRMIKQSP--SVSDAILAVDKR-----------LIDGL 88

Query: 335 LKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
              G +D A  +F  M +  G    + LY  L  GLC   R+EE+   + EME  G    
Sbjct: 89  CDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFID 148

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
                S+    CR + +  A+ +  +M   G +P       LI    K G   + +    
Sbjct: 149 KMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHN 208

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M + G  P++V Y   I    +  +VD AL L   + +    P V +Y ++I+ L K  
Sbjct: 209 QMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKEN 268

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+ E E+L+ +M+  G++P    +  L+    K   +  A+  L + + K   + D+   
Sbjct: 269 RLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKIL-QAIAKNGCNLDLCLL 327

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           +T            +   L  E+  +  A   + F   I+ LC   +  AAL+    M  
Sbjct: 328 STSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVS 387

Query: 634 KGMKPDMFVFVALISAFLSE 653
            G +P +  + +LI     E
Sbjct: 388 LGCRPLLSTYNSLIKCLFQE 407


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 214/431 (49%), Gaps = 21/431 (4%)

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTMTLLC 276
           +L+ +L L+  M      P     S+L+++ S   +  +++  +WE      +      C
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY-LWEQMQMLGIPHNLCTC 119

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++        +  A + L  MIK      +G E          P+  +F  ++N   +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIK------LGHE----------PSIVTFGSLLNGFCR 163

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
             ++  AL +F +M  +G   NV +YN +IDGLC S +++ + +LL  ME+ G  P   T
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            NS+   LC       A  +V  M  +   P V     LI    K G+  EA  F  +M+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +    PDIV YS  I GL    R+D A E+F  + + GC PDVV Y+I+I+G CK+++V 
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
               LF EM  +G++ +  TY +LI G+C++G ++ A     RM+      P++ITY  L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVL 402

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + GLC  G+ + A+++  +M++ G   + +T+  +I G+CK      A   +  +  +G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462

Query: 637 KPDMFVFVALI 647
            PD++ +  ++
Sbjct: 463 MPDIWTYTTMM 473



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 223/463 (48%), Gaps = 23/463 (4%)

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           ++  ++D +L LF  M +       A +  ++  + K K+ ++ + L+ +M+  GI  + 
Sbjct: 57  IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 241 ---EILSKLITSCSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
               IL      CS     L+ L K I    + + +T             GS      LL
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF------------GS------LL 158

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
               +G+ + D       +      PN   ++ II+ L K  ++D AL L   M + G  
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN+LI GLC+S R  ++  ++  M +    P  FT N++     +   V  A   
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             +M  +  +P +   +LLI  LC + +  EA      MV +G  PD+V YS  I G   
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            K+V+  ++LF ++   G   + V Y I+I G C+A ++  AE++F  M+  G+ P++ T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN+L++G C +G I++A++ L+ M +K     D++TY  +I G+C AG   DA  ++  +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
             +G  P+  T+  ++ GL K    R A   FR MKE G+ P+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 222/504 (44%), Gaps = 85/504 (16%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   ++ LL A+ K    D+V    ++MQ  G  ++  T   LL  +C   Q   ALS
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              ++I  G    H  SI+                              TF  L++GF +
Sbjct: 138 FLGKMIKLG----HEPSIV------------------------------TFGSLLNGFCR 163

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV  AL +FD+M   G+  +  +Y+ II GLCK+KQ++ AL L + M+  GI PD   
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI+                                  L S+G    A  ++  M K 
Sbjct: 224 YNSLISG---------------------------------LCSSGRWSDATRMVSCMTKR 250

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
           E                + P+  +F+ +I+  +K+G++  A   + EM +     ++  Y
Sbjct: 251 E----------------IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + LI GLC  +RL+E+ E+   M   G  P   T + +    C+ + V   + L  +M  
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G        T+LI+  C+ GK   A      MV  G  P+I+ Y+  + GL D  +++ 
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL +  D+  +G   D+V YNIII G+CKA  VA+A D++  +  +GL+P + TY  ++ 
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474

Query: 543 GWCKSGNIDQAMLCLSRMLEKESG 566
           G  K G   +A     +M  KE G
Sbjct: 475 GLYKKGLRREADALFRKM--KEDG 496



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 1/351 (0%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           F      N S +  ++   ++  KLD +L LF  M Q   + ++  ++ L+  +    + 
Sbjct: 38  FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +    L  +M+  G      T N +  C CR   +  AL+ + KM   GHEP +     L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   C+  +  +A      MV  G+ P++V Y+  I GL   K+VD AL+L   +   G 
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PDVV YN +ISGLC + R ++A  + + M  + + P V T+N LI+   K G + +A  
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M+ + S  PD++TY+ LI GLC+  R D+A  ++  M  KGC P+ +T+  LI G 
Sbjct: 278 FYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK  +    +  F  M ++G+  +   +  LI  +       +A E+ + M
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+ + F  +++ + K  K D+ + L+ +M  +G   N+   N L++  C  ++L  +   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M + G +P+  T  S+    CR   V  AL +  +M   G++P V     +I  LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             +   A   L  M ++G  PD+V Y++ I GL    R   A  +   +      PDV  
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N +I    K  RV+EAE+ + EMI + L P + TY+LLI G C    +D+A      M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    PDV+TY+ LI+G C + + +  + L+ EM ++G   N +T+  LI G C+  + 
Sbjct: 319 SKGC-FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   FR M   G+ P++  +  L+           A  +L +M
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 22/352 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V +A  +FDQ+   G   PN   YN +++ LCKS  VD     L  M+  G G D  T  
Sbjct: 167 VYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+   C+SG++  A  + + +     + D   F+ L+ A  K G V +A E  E M   
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           ++  +  T+ +LI+G    SR+D+A ++F  M   G   D   Y ++I G CK+K++E  
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMR 281
           ++L+ EM   G+  +    + LI      G+L  + +EI+       V+   +  N ++ 
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN-VAEEIFRRMVFCGVHPNIITYNVLLH 404

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  NG I++A  +L  M K    AD+                 +++III  + K G++ 
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADI----------------VTYNIIIRGMCKAGEVA 448

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            A  ++  +   G M +++ Y  ++ GL       E+  L R+M+E G  P 
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 263/612 (42%), Gaps = 62/612 (10%)

Query: 95  YGWGYDKYTLTPLLQVY-------CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFS 146
           +GW   +      +  Y         +GQ ++A  +F E      + D   + IL+    
Sbjct: 77  FGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLC 136

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
            +G++  AC L E M D  +R    T   L++   K   ++ AL+ F+KM+       AA
Sbjct: 137 NFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAA 193

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            + ++I GL +  +++ A   + EMK + I P+    + +I      G++    + + ++
Sbjct: 194 TWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAE-AERVLQE 251

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
             V T+     S++      G + +AY+LL+ M +               KG    N + 
Sbjct: 252 MPVPTLANY-TSVIGGHCKAGDMGKAYHLLEDMKR---------------KGYQGDNLT- 294

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ +I+   +  ++D A  L  EM     + ++F Y+ LI GLC + RL E+ +LL  + 
Sbjct: 295 YNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLR 354

Query: 387 -ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            E    P   + N++     +   V  A  L  +M   G  P V   + LI+ LC  G+A
Sbjct: 355 NEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRA 414

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA  +L +MV +  LP +  YS+ I GL     +D A  +F  + A+GC P++  YN +
Sbjct: 415 SEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSL 474

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK-- 563
           I GLCK  R+ +A+    EM  +G  P   TY  LI G C+    D+A     R LE+  
Sbjct: 475 IYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534

Query: 564 -----------------------------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
                                           SP    Y T+I+ LC      +A  L  
Sbjct: 535 EISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLE 594

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M   G  P+  T  AL+  +C+ D+   A+     M   G KP +  +  L++A     
Sbjct: 595 DMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAG 654

Query: 655 NPPLAFEVLKEM 666
            P  A  VL+ +
Sbjct: 655 KPSEAHVVLRRL 666



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 167/679 (24%), Positives = 273/679 (40%), Gaps = 64/679 (9%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G  EEA  LF +   + L +P++ +Y  L+  LC    + L     +EM D G      
Sbjct: 103 TGQCEEAYRLFKEKWPQEL-IPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVL 161

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           T   LL   C SG  + AL  F ++          ++IL+    +   VD+AC   E M 
Sbjct: 162 TCKFLLNALCKSGNLELALRYFEKMSSIPCA--ATWTILIDGLFRAIRVDEACYYFEEMK 219

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRV-------------------------------DKALQ 191
              I  N  T+ V+I+G VK  +V                                KA  
Sbjct: 220 HTAIP-NNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYH 278

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLIT 248
           L + M + G+  D   Y+ +I G C+ ++++ A +L  EMK +   PD   ++IL   + 
Sbjct: 279 LLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLC 338

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                 E   L+  +  + D     +  N+++        ++ AY L   M+      DV
Sbjct: 339 RAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDV 398

Query: 309 GVEMLMIFKG--------------------TVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
            V    + +G                     + P    +  +I+ L + G+LD A ++F 
Sbjct: 399 -VTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFD 457

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M   GC  N+ +YN+LI GLC + RL ++   ++EM E G  P   T  ++   LCR  
Sbjct: 458 SMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWS 517

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME-AFRFLTDMVQEGFLPDIVCY 467
               A +L  +   QG E       ++I  L    + +E A R L  ++  G  P    Y
Sbjct: 518 RTDEACDLYVRSLEQGIEISETSCNVVIASL----RCLEQAQRVLRVVLATGNSPTAFFY 573

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  I  L     +  A +L  D+   G  PD    + ++  +C+  +   A     EM+ 
Sbjct: 574 ATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR 633

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  PSV TY+ L+N   K+G   +A + L R++   S  PD + Y  LI       + +
Sbjct: 634 LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVE 693

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  +  E++ K    + + +  L+ GL +    +      R MK      +   F  LI
Sbjct: 694 EARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILI 753

Query: 648 SAFLSELNPPLAFEVLKEM 666
             F        A  VL EM
Sbjct: 754 QGFCRLGQTDRAVRVLSEM 772



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/612 (24%), Positives = 264/612 (43%), Gaps = 61/612 (9%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V+EA   F+++K     +PNN++Y  ++  L K+  V   E  L+EM            T
Sbjct: 208 VDEACYYFEEMKHTA--IPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLA----NYT 261

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            ++  +C +G   KA  +  ++   G+  D   ++ L+    +  E+D+A EL+E M   
Sbjct: 262 SVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSN 321

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIGGLCKNKQLEM 223
           +   +  T+ +LI G  +  R+ +A  L   +  +     +   Y+ +I G  K  ++  
Sbjct: 322 DFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVND 381

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMR 281
           A QL+ EM  +G  PD    S LI    + G  +     + E   + +     + +S++ 
Sbjct: 382 AYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVIS 441

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L   G +D A  +  +M+                     PN + ++ +I  L K G+L 
Sbjct: 442 GLCRAGELDAASTVFDSMVAN----------------GCQPNLAVYNSLIYGLCKTGRLC 485

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR--------------------------- 374
            A    +EMT+ GC  +   Y  LI GLC  +R                           
Sbjct: 486 DAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI 545

Query: 375 -----LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
                LE++  +LR +  +G  PT F   ++   LC+  ++  A  L+  M   G +P  
Sbjct: 546 ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDG 605

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                L+  +C+  KA+ A  FL +MV+ G  P +  YS  +  L    +   A  + R 
Sbjct: 606 STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRR 665

Query: 490 ICAHGCC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           + +H  C PD + Y  +I+      +V EA ++  E+ +K  I S+  YN L+ G  ++ 
Sbjct: 666 LISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTR 725

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           N+ Q +  L R +++     +  T+  LI G C  G+ D A+ + +EM +K   P+    
Sbjct: 726 NL-QMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAII 783

Query: 609 MALITGLCKCDR 620
             L+  L + +R
Sbjct: 784 KFLVDELARAER 795



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 255/594 (42%), Gaps = 66/594 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  L   G V EA  +  ++      VP   +Y  ++   CK+  +      L++M+  
Sbjct: 232 VINGLVKAGKVAEAERVLQEMP-----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRK 286

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G+  D  T   L+  +C   + D+A  +  E+  + +V D   + IL+    +   + +A
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346

Query: 155 CELIERM---DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +L+  +   DDC    N  ++  LI GF K +RV+ A QLF +M  +G   D   Y  +
Sbjct: 347 RDLLGTLRNEDDCTP--NVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTL 404

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           I GLC   +   A     EM G  I P   + S +I+     GEL               
Sbjct: 405 IRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDA------------- 451

Query: 272 MTLLCNSIMRILVSNGSIDQ--AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                +++   +V+NG       YN L+  + K   + D  + +  + +   SP+  ++ 
Sbjct: 452 ----ASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYG 507

Query: 329 IIINTLLKDGKLDLALSLF--------------------------------REMTQIGCM 356
            +I  L +  + D A  L+                                R +   G  
Sbjct: 508 TLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNS 567

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
              F Y  +I+ LC  N L E+ +LL +M  +G KP   T++++   +CR+   V A+  
Sbjct: 568 PTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAF 627

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLI 475
           + +M   G +P V   + L+  L K GK  EA   L  ++      PD + Y   I    
Sbjct: 628 LEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYS 687

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           +  +V+ A  + +++ +      +VAYN ++ GL + + +    +L  EM     + + A
Sbjct: 688 NQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEA 747

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           T+N+LI G+C+ G  D+A+  LS M +  + S  +I +  L+D L  A R  ++
Sbjct: 748 TFNILIQGFCRLGQTDRAVRVLSEMKKVLTPSAAIIKF--LVDELARAEREQES 799


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 210/471 (44%), Gaps = 50/471 (10%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M+K+  A     YD ++  L K   L  AL+++  MK     P     + LI S      
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINS------ 54

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                               CN+        G   +A +L Q+M +              
Sbjct: 55  -------------------RCNA--------GEFGKALDLFQSMKR-------------- 73

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +  V P+  +++ +I+ L   G  + A  L  EM       NVF Y+++I  L    + 
Sbjct: 74  -EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EESY++L EM  +G  P  F  N + +   R  ++  A  + + M   G++P      +L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 436 IKELCKHGKAMEAFRFLTDMVQE--GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           I  L K GK  E+ + L++M     G++P+++ +S  I GL     ++ ALE+F  +   
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC P+   Y  +I+GLC+A++V +A +LF +M    + P    YN LI G+CK G++D+A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 M       P ++T+ TLIDG C  G+   A  L  EM  KG A +  T+  LI 
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
           GL +  +   AL  ++ M+EK    D    V+ +       N   A+ V +
Sbjct: 373 GLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 423



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 207/453 (45%), Gaps = 27/453 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++    K   + +AL++F+ M           Y+V+I   C   +   AL L+  MK   
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 236 -ITPDF----EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
            + PD      ++S L +S + EG   LL +    D+++       +SI++ LV     +
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSE--MRDKNIAANVFTYSSIIKSLVKEAKPE 133

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           ++Y +L+ M+                    +P+  +F+ ++    +   ++ A  +++ M
Sbjct: 134 ESYKVLEEMMAA----------------GCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM--EESGFKPTHFTLNSMFRCLCRRQ 408
            + G   +   Y+ LI GL    +L+ES ++L EM    +G+ P   T +++   LCR  
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           ++  AL +   M   G +P     T LI  LC+  K ++A      M Q    PD V Y+
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 469 AAIGGLIDIKRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           + I G      +D A +L+R++    G  P +V +N +I G CK  ++  A +L  EM T
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KGL     TY +LI G  ++  +D+A+    +M EK+    D ++  + + GLC  G  D
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKF-LLDPVSCVSFVGGLCKTGNID 416

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            A  ++    + G  PN  TF  L   L K  R
Sbjct: 417 QAYAVFEATRKSGAVPNPETFRILSESLIKLGR 449



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 230/534 (43%), Gaps = 86/534 (16%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           K++C +   A  F+++ L   G++ +A  +F+ +K E  CVP+  +YN L+ +       
Sbjct: 3   KAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSES-CVPSLVTYNVLINS------- 54

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSI 140
                                        CN+G+F KAL +F  +     V  D   ++ 
Sbjct: 55  ----------------------------RCNAGEFGKALDLFQSMKREKRVEPDRWTYNT 86

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+      G  + A +L+  M D NI  N  T+  +I   VK+++ +++ ++ ++M  +G
Sbjct: 87  LISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG 146

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              D   ++ ++ G  ++  +E A ++Y  M  SG  PD                     
Sbjct: 147 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD--------------------- 185

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
                  +V +  +L + + +I    G +D++  +L              EM M   G V
Sbjct: 186 -------NV-SYHILIHGLAKI----GKLDESLKILS-------------EMAMRAAGYV 220

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  +F  +I+ L + G+L+ AL +F  M + GC  N + Y  LI GLC + ++ ++ E
Sbjct: 221 -PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV-QGHEPWVKHNTLLIKEL 439
           L  +M ++   P     NS+    C+R  +  A  L R+M    G +P +     LI   
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK GK   A   + +M  +G   D   Y   I GL    ++D ALE+++ +       D 
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           V+    + GLCK   + +A  +F      G +P+  T+ +L     K G ++ A
Sbjct: 400 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 169/343 (49%), Gaps = 37/343 (10%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++D ++ +L K G L  AL +F  M    C+ ++  YN LI+  CN+    ++ +L + M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 386 E-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           + E   +P  +T N+                                   LI  LC  G 
Sbjct: 72  KREKRVEPDRWTYNT-----------------------------------LISGLCSSGN 96

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A + L++M  +    ++  YS+ I  L+   + + + ++  ++ A GC PDV A+N 
Sbjct: 97  TEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG 156

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++ G  ++  + +A +++  M+  G  P   +Y++LI+G  K G +D+++  LS M  + 
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 565 SGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +G  P+VIT++TLI GLC  G  + A+ ++  M E GC PN+ T+  LI GLC+ ++   
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A   F  M +  + PD   + +LI+ +    +   A ++ +EM
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 205/459 (44%), Gaps = 32/459 (6%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L++A  +A    + + +    C  S      LI    + G   +A  LF  +KRE    P
Sbjct: 20  LAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEP 79

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + ++YN L+  LC S + +     L EM+D     + +T + +++      + +++  V 
Sbjct: 80  DRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVL 139

Query: 125 NEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E++  G   D   F+ ++  F++   ++KA E+ + M +   + +  ++ +LIHG  K 
Sbjct: 140 EEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKI 199

Query: 184 SRVDKALQLFDKMT--KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            ++D++L++  +M    +G+  +   +  +I GLC+  +LE AL+++  M  +G  P+  
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 259

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--------NSIMRILVSNGSIDQAY 293
             + LI       E  +  +E++E      MT  C        NS++      GS+D+A 
Sbjct: 260 TYTTLIAGLC-RAEKVIQARELFEK-----MTQACIPPDAVAYNSLIAGYCKRGSMDEAE 313

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            L + M  G                 + P   +F+ +I+   K GKL  A  L  EM   
Sbjct: 314 KLYREMSGG---------------AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +   Y  LI GL  + +L+E+ E+ ++M E  F     +  S    LC+  ++  A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             +    R  G  P  +   +L + L K G+  +A + +
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 48  EANMLFDQVKREGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK--YTL 104
           +A  LF+++ +   C+P +  +YN L+   CK  S+D  E   +EM   G G      T 
Sbjct: 276 QARELFEKMTQ--ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG-GAGLQPTIVTF 332

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
             L+  +C  G+  +A  +  E+   G   D   + IL+   S+  ++D+A E+ ++M +
Sbjct: 333 NTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMRE 392

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
               L+  +    + G  K   +D+A  +F+   KSG   +   + ++   L K  ++E 
Sbjct: 393 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 452

Query: 224 ALQLYSEMKGSGIT 237
           A +L    K   IT
Sbjct: 453 AQKLMEPAKARDIT 466


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/663 (23%), Positives = 283/663 (42%), Gaps = 55/663 (8%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +P     LIR     G+V  A   F  +   G   P+ Y+ N ++ ++ K+C   LV
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGF-KPSVYTCNMIMASMVKNCRAHLV 159

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
               K+M       +  +   L+ V C  G+  KA+++   +  +G+V   V ++ LL  
Sbjct: 160 WXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSW 219

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G    A  LI  M+   I+ +  T+ + I    + SR  +   +  KM       +
Sbjct: 220 CCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPN 279

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKE 262
              Y+ +I G  K  ++ +A ++++EM    ++P+    + LI      G  E  L + +
Sbjct: 280 EVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLD 339

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           + E  DV    +   +++  L  +   D A N+L+                       S 
Sbjct: 340 VMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINR----------------TSL 383

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  S  ++I+ L ++G LD A  L  EM + G   ++  ++ LI+G C    L ++ E++
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVM 443

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            ++   GF P +   +++    C+  +V   +     M + G          L+  LC++
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCEN 503

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--CAHGCCP--- 497
           GK +EA  FL  + + G +P+ V +   I G  ++     A  +F  +  C H   P   
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTY 563

Query: 498 ------------------------------DVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
                                         D ++YN +I  + K+  + EA  LF EMI 
Sbjct: 564 GSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ 623

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
             ++P   TY  +++G  + G +  A + L R+++KE  + + I YT  IDGL  AG+  
Sbjct: 624 NNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSK 683

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A+ L+ EMEEKG + + I   ++  G  +  +  +A       + K + P++  F  L+
Sbjct: 684 AALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILL 743

Query: 648 SAF 650
             +
Sbjct: 744 HGY 746



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/576 (22%), Positives = 239/576 (41%), Gaps = 65/576 (11%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           +GY K  L  L Q   NSG  +    V  +       +  VF +L+  + + G V  A  
Sbjct: 70  YGYAKSILKHLAQK--NSGS-NFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVN 126

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
               M     + +  T  +++   VK  R       F +M  S    + + ++++I  LC
Sbjct: 127 TFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLC 186

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE------DRDVN 270
              +L+ A+ + + M+ +G  P     + L++ C  +G     +  I          DV 
Sbjct: 187 VQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVC 246

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +  +S+ R    N    Q Y +L+ M                    ++PN  S++ +
Sbjct: 247 TYNMFIDSLCR----NSRSAQGYLVLKKM----------------RNKMITPNEVSYNTL 286

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN  +K+GK+ +A  +F EM ++    N+  YN LI+G C +   EE+  LL  ME +  
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDV 346

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P   T+ ++   L +      A N++ +  +         +T++I  LC++G   EAF+
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQ 406

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L                                    ++C  G  PD++ ++++I+G C
Sbjct: 407 LLI-----------------------------------EMCKDGVYPDIITFSVLINGFC 431

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   + +A+++ +++  +G +P+   ++ LI   CK GN+ + M   + M      + D 
Sbjct: 432 KVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAM-NLNGQNADN 490

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            T  +L+  LC  G+  +A    + +   G  PN +TF  +I G         A   F  
Sbjct: 491 FTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDK 550

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M   G  P  F + +L+       N   A ++LK++
Sbjct: 551 MISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 249/605 (41%), Gaps = 29/605 (4%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI     VG + +A  +  ++ REG  VPNN  ++ L+   CK  +V         M   
Sbjct: 426  LINGFCKVGNLNKAKEVMSKIYREGF-VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLN 484

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   D +T   L+   C +G+  +A    + I   G V   V F  ++  ++  G+   A
Sbjct: 485  GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              + ++M  C    +  T+  L+    K     +A +L  K+     A D   Y+ +I  
Sbjct: 545  FSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 215  LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            + K+  L  A++L+ EM  + I PD    + +++    EG L  +   I+  R +    L
Sbjct: 605  ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRL--VCAFIFLGRLMQKEIL 662

Query: 275  LCNSIMRI-----LVSNGSIDQAYNLLQAM---------IKGEPIADVGVEMLMIFKGT- 319
              NSI+       L   G    A  L + M         I    I D    M  +F  + 
Sbjct: 663  TLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASS 722

Query: 320  ---------VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                     V PN ++F+I+++   +   +     L+  M + G   N   Y++LI GLC
Sbjct: 723  LISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLC 782

Query: 371  NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            N   LE   ++L+            T N + R  C   D+   ++L   M V        
Sbjct: 783  NHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKD 842

Query: 431  HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
                +   L +   +   F F+ +M+++GF+P    Y   +  +  +  +  A +L   +
Sbjct: 843  TQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM 902

Query: 491  CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             A G   D  A   ++ GL    ++ EA  +   M+    IP+ +T+  L++ +CK  N 
Sbjct: 903  VALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNF 962

Query: 551  DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             +A   L  ++E      D++ Y  LI   C  G    A+  + E+++KG  PN  T+  
Sbjct: 963  KEAH-NLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRV 1021

Query: 611  LITGL 615
            L++ +
Sbjct: 1022 LVSAI 1026



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 176/413 (42%), Gaps = 36/413 (8%)

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
           N +T +      +LV       A ++L+ + +    ++    +LM      S N + FD+
Sbjct: 51  NHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDL 110

Query: 330 IINTLLKDG-----------------------------------KLDLALSLFREMTQIG 354
           +I   L+ G                                   +  L    F++M    
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSR 170

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              NV  +N LI  LC   +L+++  +L  ME +G+ PT  + N++    C++     AL
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            L+  M  +G +  V    + I  LC++ ++ + +  L  M  +   P+ V Y+  I G 
Sbjct: 231 VLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGF 290

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
           +   ++ +A  +F ++      P+++ YNI+I+G C      EA  L + M    + P+ 
Sbjct: 291 VKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNE 350

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T   L+NG  KS   D A   L R     + S + I++T +IDGLC  G  D+A  L  
Sbjct: 351 VTIGTLLNGLYKSAKFDVARNILERYSINRT-SLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           EM + G  P+ ITF  LI G CK      A      +  +G  P+  +F  LI
Sbjct: 410 EMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 146/680 (21%), Positives = 270/680 (39%), Gaps = 92/680 (13%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  EEA  L D ++   +  PN  +   LL  L KS   D+    L+         +  +
Sbjct: 329 GNFEEALRLLDVMEANDV-RPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCIS 387

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T ++   C +G  D+A  +  E+   G + D   FS+L+  F K G ++KA E++ ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIY 447

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 N   F  LI+   K   V + ++ +  M  +G  +D    + ++  LC+N +L 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507

Query: 223 MALQLYSEMKGSGITPD--------------------FEILSKLITSCSDEGELTL--LV 260
            A +    +   G+ P+                    F +  K+I+        T   L+
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLL 567

Query: 261 K------EIWEDRDV---------NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           K        WE R +            T+  N+++  +  +G++ +A  L + MI+    
Sbjct: 568 KVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN-- 625

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNN 364
                         + P++ ++  I++ L+++G+L  A      + Q   +  N  +Y  
Sbjct: 626 --------------ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTC 671

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            IDGL  + + + +  L +EMEE G       LNS+     R   V  A +L+ K R + 
Sbjct: 672 FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKN 731

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P +    +L+    +    M  F+    M + GF P+ + Y + I GL +   ++L +
Sbjct: 732 VIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGI 791

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL----------------------- 521
           ++ +   A     D + +N++I   C+   + +  DL                       
Sbjct: 792 KMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVL 851

Query: 522 ------------FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
                        +EM+ KG IP+   Y  ++   C+ G+I Q    L   +     S D
Sbjct: 852 VRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDI-QGAFKLKDQMVALGISLD 910

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
                 ++ GL + G+ ++A+ +   M      P   TF  L+   CK D  + A     
Sbjct: 911 DAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKI 970

Query: 630 MMKEKGMKPDMFVFVALISA 649
           +M+   +K D+  +  LISA
Sbjct: 971 LMEHYRVKLDIVAYNVLISA 990



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 6/176 (3%)

Query: 89   LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
            + EM   G+         +++  C  G    A  + ++++  G  +D+     ++   + 
Sbjct: 864  MHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLAL 923

Query: 148  WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
             G++++A  +++RM          TF  L+H F KK    +A  L   M       D   
Sbjct: 924  CGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVA 983

Query: 208  YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE-----GELTL 258
            Y+V+I   C N  +  AL  Y E+K  G+ P+      L+++ S +     GE+ L
Sbjct: 984  YNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVL 1039


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 179/353 (50%), Gaps = 2/353 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M  KG + PN  +++ II  L K GK+D A  + REM   G + +  +Y  LIDG C   
Sbjct: 36  MQMKG-LKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLG 94

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            ++ +Y+L  EME+    P      ++   LCR   ++ A  +  KM  +G EP     T
Sbjct: 95  NIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYT 154

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK G+  +AF     MVQ G  P++V Y+A   GL  + +VD A EL  ++C  
Sbjct: 155 TLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK 214

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   ++  YN +++GLCK+  + +A  L  EM   G+ P   T+  L++ +CK+G + +A
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L  ML++    P VIT+  L++G C++G  +D   L   M EKG  PN  T+ +L+ 
Sbjct: 275 HELLREMLDR-GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             C  +  R     ++ M  +G+ PD   +  LI       N   A+ + KEM
Sbjct: 334 QYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 386



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 169/353 (47%), Gaps = 2/353 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M F+G  +P+  S+  +IN     G+L   L L +EM   G   N++ YN++I  LC S 
Sbjct: 1   MKFRGD-APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG 59

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +++++  +LREM   G  P      ++    C+  ++  A  L  +M  Q   P     T
Sbjct: 60  KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I  LC+ GK MEA +    M   G  PD V Y+  I G      ++ A  L   +   
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+VV Y  +  GLCK  +V  A +L +EM  KGL  ++ TYN L+NG CKSGNI QA
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  +  M E     PD IT+TTL+D  C  G    A  L  EM ++G  P  ITF  L+ 
Sbjct: 240 VKLMEEM-EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMN 298

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G C              M EKG+ P+   + +L+  +    N     E+ K M
Sbjct: 299 GFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 205/455 (45%), Gaps = 55/455 (12%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +S ++  +   GE+ K  +LI+ M    ++ N  T+  +I    K  +VD A ++  +M 
Sbjct: 13  YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEG 254
             G   D  +Y  +I G CK   ++ A +L+ EM+   I PDF   + +I     C    
Sbjct: 73  NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E   +  +++  R V    +   +++     +G +++A++L   M++             
Sbjct: 133 EADKVFNKMF-SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS------------ 179

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                ++PN  ++  + + L K G++D A  L  EM   G   N+  YN+L++GLC S  
Sbjct: 180 ----GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN 235

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           + ++ +L+ EME +G  P   T  ++    C+  ++V A  L+R+M  +G +P V    +
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L+   C  G   +  R L  M+++G +P+   Y++ +        +    E+++ +CA G
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355

Query: 495 CCPDVVAYNIIISGLCKAQRV-----------------------------------AEAE 519
             PD   YNI+I G CKA+ +                                   +EA 
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           +LF EM  +G+      YNL ++     GN++ A+
Sbjct: 416 ELFEEMRREGMAADAEIYNLFVDISYGEGNMETAL 450



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 209/449 (46%), Gaps = 23/449 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+  SY+ ++   C    +  V   ++EMQ  G   + YT   ++ + C SG+ D A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  E+I+ G V D  V++ L+  F K G +  A +L + M+   I  +   +  +I G  
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  ++ +A ++F+KM   G   D   Y  +I G CK+ ++E A  L+++M  SG+TP+  
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 242 ILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + L       G++     LL +   +   +N  T   NS++  L  +G+I QA  L++
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY--NSLVNGLCKSGNIRQAVKLME 244

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M           E+  ++     P+T +F  +++   K G++  A  L REM   G   
Sbjct: 245 EM-----------EVAGMY-----PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
            V  +N L++G C S  LE+   LL  M E G  P   T NS+ +  C R ++     + 
Sbjct: 289 TVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIY 348

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           + M  +G  P      +LIK  CK     EA+    +M ++GF      Y++ I G    
Sbjct: 349 KGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKK 408

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIII 506
           K++  A ELF ++   G   D   YN+ +
Sbjct: 409 KKISEARELFEEMRREGMAADAEIYNLFV 437



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 177/445 (39%), Gaps = 97/445 (21%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           CLG  G +++   L  +++ +GL  PN Y+YN ++  LCKS  VD  E  L+EM + G  
Sbjct: 21  CLG--GELQKVLKLIQEMQMKGL-KPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIV 77

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV------------------------- 133
            D    T L+  +C  G    A  +F+E+     V                         
Sbjct: 78  PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKV 137

Query: 134 -----------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
                      DE  ++ L+  + K GE++KA  L  +M    +  N  T+  L  G  K
Sbjct: 138 FNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCK 197

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +VD A +L  +M   G   +   Y+ ++ GLCK+  +  A++L  EM+ +G+ PD   
Sbjct: 198 LGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTIT 257

Query: 243 LSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            + L+ +    GE+     L++E+  DR +    +  N +M     +G ++    LL  M
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREML-DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWM 316

Query: 300 I-KGEPIADVGVEMLM--------------IFKGT----VSPNTSSFDIIINTLLK---- 336
           + KG          LM              I+KG     V P++++++I+I    K    
Sbjct: 317 LEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNM 376

Query: 337 -----------DGKLDLALS--------------------LFREMTQIGCMQNVFLYNNL 365
                      +   +L  S                    LF EM + G   +  +YN  
Sbjct: 377 KEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLF 436

Query: 366 IDGLCNSNRLEESYELLREMEESGF 390
           +D       +E + EL  E  E+ F
Sbjct: 437 VDISYGEGNMETALELCDEAIENCF 461



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 4/206 (1%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           M P  + F  L+      G + +A+ L  ++   GL  P   ++N L+   C S  ++  
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL-QPTVITFNVLMNGFCMSGMLEDG 309

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
           E  L  M + G   +  T   L++ YC          ++  +   G + D + ++IL+  
Sbjct: 310 ERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKG 369

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K   + +A  L + M +    L   ++  +I GF KK ++ +A +LF++M + G A+D
Sbjct: 370 HCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAAD 429

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSE 230
           A +Y++ +        +E AL+L  E
Sbjct: 430 AEIYNLFVDISYGEGNMETALELCDE 455


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 208/422 (49%), Gaps = 20/422 (4%)

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
           + Y++++  LC+    ++   ++  M   G  PD ++L  L+T  +   +  ++ K + E
Sbjct: 74  STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 266 --DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              ++V   + + N+++ +LV    + +A  L +             E L++      P+
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFK-------------EYLVM---QSPPD 177

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T +F+I+I  L + G +D A  +F++M   GC+ +V  YN LI+GLC +N ++   EL +
Sbjct: 178 TWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFK 237

Query: 384 EME-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           E++  S   P   T  S+    C+   +  A NL  +M   G +P V    +LI    K 
Sbjct: 238 EIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKI 297

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G   EA      M       D+V +++ I G     +V+  L+ +  +      P V  Y
Sbjct: 298 GNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTY 357

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            ++I+ LCK  R+ EA D   ++    +IP    YN +I+G+CK+GN+D+  + L  M E
Sbjct: 358 AVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEE 417

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
           K    PD +T+T LI G C+ GR  +AI ++N M    CAP+ IT  +LI+ L K   P 
Sbjct: 418 KRC-DPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPN 476

Query: 623 AA 624
            A
Sbjct: 477 EA 478



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 2/343 (0%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           S++++++ +L + G  DL   +F  M   G + +  L   L+  +  ++  +   +LL E
Sbjct: 74  STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           ++    +   F  N++   L ++  V  A+ L ++  V    P      +LI+ LC+ G 
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG-CCPDVVAYN 503
              AF    DM   G LPD+V Y+  I GL     V    ELF++I +   C PD+V Y 
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYT 253

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            IISG CK+ ++ EA +LF EM+  G+ P+V T+N+LI+G+ K GNI +A   + R +  
Sbjct: 254 SIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAE-AMYRKMAY 312

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              S DV+T+T+LIDG C AG+ +  +  WN M+ +  +P   T+  LI  LCK +R   
Sbjct: 313 FDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNE 372

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A      +K   + P  F++  +I  F    N      +LKEM
Sbjct: 373 ARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEM 415



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 2/346 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V  N+  ++ +++ L+K  ++  A+ LF+E   +    + + +N LI GLC    ++ ++
Sbjct: 139 VRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAF 198

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKE 438
           E+ ++ME  G  P   T N++   LC+  +V     L ++++ +    P +   T +I  
Sbjct: 199 EVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISG 258

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            CK GK  EA     +M++ G  P+++ ++  I G   I  +  A  ++R +    C  D
Sbjct: 259 FCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSAD 318

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV +  +I G C+A +V      +N M T+ + P+V TY +LIN  CK   +++A   L 
Sbjct: 319 VVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLG 378

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           + ++  S  P    Y  +IDG C AG  D+  ++  EMEEK C P+++TF  LI G C  
Sbjct: 379 Q-IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVK 437

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            R   A+  F  M      PD     +LIS  L    P  A+ + K
Sbjct: 438 GRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRK 483



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 193/471 (40%), Gaps = 57/471 (12%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACEL 157
           Y  Y L  L++  C  G  D    VF+ +   G + D  +   L+   ++  + D   +L
Sbjct: 73  YSTYNL--LMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKL 130

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +  +    +R+N   +  L+   VK+++V +A+ LF +        D   ++++I GLC+
Sbjct: 131 LAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCR 190

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTL 274
              ++ A +++ +M+  G  PD    + LI       E+     L KEI    D +   +
Sbjct: 191 VGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIV 250

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              SI+     +G + +A NL + M+                +  + PN  +F+++I+  
Sbjct: 251 TYTSIISGFCKSGKMKEASNLFEEMM----------------RSGIQPNVITFNVLIDGF 294

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A +++R+M    C  +V  + +LIDG C + ++    +    M+     PT 
Sbjct: 295 GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTV 354

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T                                     +LI  LCK  +  EA  FL  
Sbjct: 355 YTY-----------------------------------AVLINALCKENRLNEARDFLGQ 379

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +     +P    Y+  I G      VD    + +++    C PD V + I+I G C   R
Sbjct: 380 IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGR 439

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           + EA ++FN M+     P   T N LI+   K+G  ++A       LE  +
Sbjct: 440 MFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRN 490



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 185/423 (43%), Gaps = 29/423 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  +G  +  N++FD +  +G  +P++     L+  + ++   D+V+  L E+Q  
Sbjct: 79  LMRSLCQMGHHDLVNIVFDYMGSDGH-LPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGK 137

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGEVDKA 154
               + +    LL V     Q  +A+ +F E ++     D   F+IL+    + G VD+A
Sbjct: 138 EVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRA 197

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIG 213
            E+ + M+      +  T+  LI+G  K + V +  +LF ++ ++S  + D   Y  II 
Sbjct: 198 FEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIIS 257

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWED--R 267
           G CK+ +++ A  L+ EM  SGI P+    + LI      G +     +  K  + D   
Sbjct: 258 GFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSA 317

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           DV T T L +   R     G ++        M                    VSP   ++
Sbjct: 318 DVVTFTSLIDGYCRA----GQVNHGLKFWNVMK----------------TRNVSPTVYTY 357

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            ++IN L K+ +L+ A     ++     +   F+YN +IDG C +  ++E   +L+EMEE
Sbjct: 358 AVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEE 417

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T   +    C +  +  A+N+  +M      P       LI  L K G   E
Sbjct: 418 KRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNE 477

Query: 448 AFR 450
           A+R
Sbjct: 478 AYR 480



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 7/265 (2%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L     V+    LF +++    C P+  +Y  ++   CKS  +       +EM   
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +  T   L+  +   G   +A +++ ++       D   F+ L+  + + G+V+  
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHG 338

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +    M   N+     T+ VLI+   K++R+++A     ++  S       MY+ +I G
Sbjct: 339 LKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDG 398

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
            CK   ++    +  EM+     PD    + LI     +G +   +     +R + T   
Sbjct: 399 FCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIF--NRMLATRCA 456

Query: 273 --TLLCNSIMRILVSNGSIDQAYNL 295
              +  NS++  L+  G  ++AY +
Sbjct: 457 PDNITVNSLISCLLKAGMPNEAYRI 481


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 259/578 (44%), Gaps = 32/578 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM----D 162
           LL+    S   +++L +FN++ D    + ++ ++ L    + G V  A ++I+ M    D
Sbjct: 163 LLRASGRSELVEESLILFNDL-DPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESND 221

Query: 163 DCNIRLNEKTFCVLIHGFVKKSR------VDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           D N R N+ T  +L    +K+ R       D+ + L  K  + G    +     +I  LC
Sbjct: 222 DSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLC 281

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTM 272
           +N++      L++EM   G   +    + L+T  + EG       L+ K +  D   N +
Sbjct: 282 RNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVV 341

Query: 273 T--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +L N + +       +D A  +L+ M  G+    + V        +V P+   ++ +
Sbjct: 342 TFGILINHMCKFR----RVDDALEVLEKMSGGKESGGISV--------SVEPDVVIYNTL 389

Query: 331 INTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           I+ L K G+    L L   M +Q GC  +   YN LIDG C +  +E+  EL  EM + G
Sbjct: 390 IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG 449

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T+N++   +CR   V  A+N   + + +G +      T LI   C      +A 
Sbjct: 450 VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAM 509

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
               +M++ G  PD + Y   I G     R+  A  +  ++   G  PD V YN +I G 
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGF 569

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C+  +     ++  EM   GL P   TYN LI    K+G++  A   + +M+ K    P 
Sbjct: 570 CRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI-KAGVVPT 628

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHF 628
           V TY  +I+  C+ G  ++A+ ++ +M+      PN + +  LI  LCK ++ ++A+   
Sbjct: 629 VATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLM 688

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             MK  G+ P+   + A+      E +    FE +  M
Sbjct: 689 EDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 273/616 (44%), Gaps = 80/616 (12%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVK-----------------REGL--------- 61
           ++  A  FL+R  G   LVEE+ +LF+ +                  R G          
Sbjct: 155 LTVNAASFLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVID 214

Query: 62  ----------CVPNNYSYNCLLEALCKS-------CSVDLVEMRLKEMQDYGWGYDKYTL 104
                     C PN+ + + L   L K           ++V + LK   ++G     + +
Sbjct: 215 EMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLK-FGEHGVLISSFWM 273

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDD 163
             L+   C + + ++   +F E+I  G V E    + LL   ++ G  ++  EL+E+M +
Sbjct: 274 GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE 333

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT---KSGFAS-----DAAMYDVIIGGL 215
            +I+ N  TF +LI+   K  RVD AL++ +KM+   +SG  S     D  +Y+ +I GL
Sbjct: 334 MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGL 393

Query: 216 CKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNT 271
           CK  + +  L L   M+   G  PD    + LI      GE+    KE++++ +   V  
Sbjct: 394 CKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK-GKELFDEMNKEGVAP 452

Query: 272 MTLLCNSIMRILVSNGSIDQAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
             +  N+++  +   G +  A N  ++A  +G              KG    +  ++  +
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG-------------MKG----DAVTYTAL 495

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN        + A+ LF EM + GC  +  +Y  LI G   + R+ ++  +L E+++ G 
Sbjct: 496 INAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAF 449
           +P     N++    CR         ++++M   G +P  + +NTL I    K+G    A 
Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL-IAYASKNGDLKFAQ 614

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCCPDVVAYNIIISG 508
           + +  M++ G +P +  Y A I         + A+E+F+D+  A    P+ V YNI+I+ 
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  +V  A  L  +M   G+ P+  TYN +  G     ++++    + RM+E  + +P
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE-HACNP 733

Query: 569 DVITYTTLIDGLCIAG 584
           D IT   L + L   G
Sbjct: 734 DYITMEILTEWLSAVG 749


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 239/493 (48%), Gaps = 26/493 (5%)

Query: 181 VKKSRVDKALQLFDKMTKSG---FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           V  +R+    +LFD++T S        + ++D+++   C+ ++ + A + +  MK  GI 
Sbjct: 152 VMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 211

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYN 294
           P  E       +C+D   L+L +K       +N M +   L   + R+ +S  S    +N
Sbjct: 212 PKIE-------TCNDM--LSLFLK-------LNRMEMAWVLYAEMFRLRIS--STVYTFN 253

Query: 295 LLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           ++  ++  E       E +   +G    PN  S++ II+     G ++ A  +   M   
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   + + Y +LI G+C   RLEE+  L  +M E G  P   T N++    C + D+  A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            +   +M  +G  P V    LL+  L   G+  EA   + +M ++G +PD + Y+  I G
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                    A +L  ++ + G  P  V Y  +I  L +  R+ EA+DLF +++ +G+ P 
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  +N +++G C +GN+++A + L  M +++S  PD +T+ TL+ G C  G+ ++A ML 
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +EM+ +G  P+ I++  LI+G  +    + A      M   G  P +  + ALI      
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612

Query: 654 LNPPLAFEVLKEM 666
               LA E+LKEM
Sbjct: 613 QEGDLAEELLKEM 625



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 177/676 (26%), Positives = 289/676 (42%), Gaps = 63/676 (9%)

Query: 2   ASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL 61
            + +SRAR ++          KS CF +P       R LGS      A         +  
Sbjct: 3   GATISRARSLSN---------KSCCFHAPMGASLRPRFLGSAANTPNAG--------DTN 45

Query: 62  CVPNNYSYNCLLEALCKSCSVDLV--EMRLKEMQDYGWGYDKY---TLTPLL--QVYCNS 114
               ++S+N    +L  S S   +  E+  K +    W + +     LTP L   V  N 
Sbjct: 46  SSTFHFSFNRNFNSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNL 105

Query: 115 GQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
               + +S F   +    +D   + + +V  ++      A +L++++    I  N + F 
Sbjct: 106 CSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFD 165

Query: 175 VLIHG----FVKKS--------------RVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
            L        VK S              R D+A + F  M + G        + ++    
Sbjct: 166 ELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFL 225

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTL 274
           K  ++EMA  LY+EM    I+      + ++     EG+L    + I   E        +
Sbjct: 226 KLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV 285

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
             N+I+    S G+I+ A  +L AM +KG                 + P++ ++  +I+ 
Sbjct: 286 SYNTIIHGYSSRGNIEGARRILDAMRVKG-----------------IEPDSYTYGSLISG 328

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           + K+G+L+ A  LF +M +IG + N   YN LIDG CN   LE ++    EM + G  P+
Sbjct: 329 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 388

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +   L     +  A +++++MR +G  P      +LI    + G A +AF    
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHN 448

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+ +G  P  V Y++ I  L    R+  A +LF  I   G  PDV+ +N ++ G C   
Sbjct: 449 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            V  A  L  EM  K + P   T+N L+ G C+ G +++A + L  M ++    PD I+Y
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM-KRRGIKPDHISY 567

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
            TLI G    G   DA  + +EM   G  P  +T+ ALI  LCK      A    + M  
Sbjct: 568 NTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 627

Query: 634 KGMKPDMFVFVALISA 649
           KG+ PD   +++LI  
Sbjct: 628 KGISPDDSTYLSLIEG 643



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 225/491 (45%), Gaps = 31/491 (6%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+    +    D+A +    M +  I    +T   ++  F+K +R++ A  L+ +M
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +   +S    +++++  LCK  +L+ A +    M+G G  P+    + +I   S  G +
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300

Query: 257 --------TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                    + VK I  D      +    S++  +   G +++A  L   M+      ++
Sbjct: 301 EGARRILDAMRVKGIEPD------SYTYGSLISGMCKEGRLEEASGLFDKMV------EI 348

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G+           PN  +++ +I+     G L+ A S   EM + G M +V  YN L+  
Sbjct: 349 GL----------VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           L    R+ E+ ++++EM + G  P   T N +     R  +   A +L  +M  +G EP 
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T LI  L +  +  EA      ++ +G  PD++ ++A + G      V+ A  L +
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++      PD V +N ++ G C+  +V EA  L +EM  +G+ P   +YN LI+G+ + G
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I  A      ML     +P ++TY  LI  LC     D A  L  EM  KG +P+  T+
Sbjct: 579 DIKDAFRVRDEMLSI-GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637

Query: 609 MALITGLCKCD 619
           ++LI G+   D
Sbjct: 638 LSLIEGMGNVD 648



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 233/519 (44%), Gaps = 33/519 (6%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGA---LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RIA  R L  ++  SR  +S  +      L+R    +   +EA   F  +K +G+ VP  
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGI-VPKI 214

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            + N +L    K   +++  +   EM         YT   ++ V C  G+  KA      
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G+    V ++ ++  +S  G ++ A  +++ M    I  +  T+  LI G  K+ R
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +++A  LFDKM + G   +A  Y+ +I G C    LE A     EM   GI P     + 
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394

Query: 246 LITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           L+ +   EG   E   ++KE+ +     D  T  +L N   R     G+  +A++L   M
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC----GNAKKAFDLHNEM 450

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                KG + P   ++  +I  L +  ++  A  LF ++   G   +V
Sbjct: 451 LS---------------KG-IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 494

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            ++N ++DG C +  +E ++ LL+EM+     P   T N++ +  CR   V  A  L+ +
Sbjct: 495 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554

Query: 420 MRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M+ +G +P  + +NT LI    + G   +AFR   +M+  GF P ++ Y+A I  L   +
Sbjct: 555 MKRRGIKPDHISYNT-LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 613

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
             DLA EL +++   G  PD   Y  +I G+     + E
Sbjct: 614 EGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 229/508 (45%), Gaps = 30/508 (5%)

Query: 52  LFDQV--KREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LFD++   R+ L V ++  ++ L+   C+    D        M++ G      T   +L 
Sbjct: 163 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 222

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           ++    + + A  ++ E+         + F+I++    K G++ KA E I  M+    + 
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 282

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  ++  +IHG+  +  ++ A ++ D M   G   D+  Y  +I G+CK  +LE A  L+
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS--- 285
            +M   G+ P+    + LI    ++G+L       + D  V    +   S   +LV    
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS--YRDEMVKKGIMPSVSTYNLLVHALF 400

Query: 286 -NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G + +A ++++ M K               KG + P+  +++I+IN   + G    A 
Sbjct: 401 MEGRMGEADDMIKEMRK---------------KGII-PDAITYNILINGYSRCGNAKKAF 444

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L  EM   G       Y +LI  L   NR++E+ +L  ++ + G  P     N+M    
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 405 CRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           C   +V  A  L+++M  +   P  V  NTL+ +  C+ GK  EA   L +M + G  PD
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLM-QGRCREGKVEEARMLLDEMKRRGIKPD 563

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            + Y+  I G      +  A  +  ++ + G  P ++ YN +I  LCK Q    AE+L  
Sbjct: 564 HISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 623

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNID 551
           EM+ KG+ P  +TY  LI G    GN+D
Sbjct: 624 EMVNKGISPDDSTYLSLIEGM---GNVD 648


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 239/493 (48%), Gaps = 26/493 (5%)

Query: 181 VKKSRVDKALQLFDKMTKSG---FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           V  +R+    +LFD++T S        + ++D+++   C+ ++ + A + +  MK  GI 
Sbjct: 130 VMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 189

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSIMRILVSNGSIDQAYN 294
           P  E       +C+D   L+L +K       +N M +   L   + R+ +S  S    +N
Sbjct: 190 PKIE-------TCNDM--LSLFLK-------LNRMEMAWVLYAEMFRLRIS--STVYTFN 231

Query: 295 LLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           ++  ++  E       E +   +G    PN  S++ II+     G ++ A  +   M   
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   + + Y +LI G+C   RLEE+  L  +M E G  P   T N++    C + D+  A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            +   +M  +G  P V    LL+  L   G+  EA   + +M ++G +PD + Y+  I G
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                    A +L  ++ + G  P  V Y  +I  L +  R+ EA+DLF +++ +G+ P 
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V  +N +++G C +GN+++A + L  M +++S  PD +T+ TL+ G C  G+ ++A ML 
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +EM+ +G  P+ I++  LI+G  +    + A      M   G  P +  + ALI      
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590

Query: 654 LNPPLAFEVLKEM 666
               LA E+LKEM
Sbjct: 591 QEGDLAEELLKEM 603



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 234/514 (45%), Gaps = 52/514 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +L+    +    D+A +    M +  I    +T   ++  F+K +R++ A  L+ +M
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +   +S    +++++  LCK  +L+ A +    M+G G  P+                 
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN----------------- 261

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMI 315
                            +  N+I+    S G+I+ A  +L AM +KG             
Sbjct: 262 ----------------VVSYNTIIHGYSSRGNIEGARRILDAMRVKG------------- 292

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
               + P++ ++  +I+ + K+G+L+ A  LF +M +IG + N   YN LIDG CN   L
Sbjct: 293 ----IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           E ++    EM + G  P+  T N +   L     +  A +++++MR +G  P      +L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I    + G A +AF    +M+ +G  P  V Y++ I  L    R+  A +LF  I   G 
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PDV+ +N ++ G C    V  A  L  EM  K + P   T+N L+ G C+ G +++A +
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L  M ++    PD I+Y TLI G    G   DA  + +EM   G  P  +T+ ALI  L
Sbjct: 529 LLDEM-KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 587

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           CK      A    + M  KG+ PD   +++LI  
Sbjct: 588 CKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 233/519 (44%), Gaps = 33/519 (6%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGA---LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           RIA  R L  ++  SR  +S  +      L+R    +   +EA   F  +K +G+ VP  
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGI-VPKI 192

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            + N +L    K   +++  +   EM         YT   ++ V C  G+  KA      
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G+    V ++ ++  +S  G ++ A  +++ M    I  +  T+  LI G  K+ R
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +++A  LFDKM + G   +A  Y+ +I G C    LE A     EM   GI P     + 
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372

Query: 246 LITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           L+ +   EG   E   ++KE+ +     D  T  +L N   R     G+  +A++L   M
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC----GNAKKAFDLHNEM 428

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                KG + P   ++  +I  L +  ++  A  LF ++   G   +V
Sbjct: 429 LS---------------KG-IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 472

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            ++N ++DG C +  +E ++ LL+EM+     P   T N++ +  CR   V  A  L+ +
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532

Query: 420 MRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           M+ +G +P  + +NT LI    + G   +AFR   +M+  GF P ++ Y+A I  L   +
Sbjct: 533 MKRRGIKPDHISYNT-LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 591

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
             DLA EL +++   G  PD   Y  +I G+     + E
Sbjct: 592 EGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 229/508 (45%), Gaps = 30/508 (5%)

Query: 52  LFDQV--KREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
           LFD++   R+ L V ++  ++ L+   C+    D        M++ G      T   +L 
Sbjct: 141 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 200

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRL 168
           ++    + + A  ++ E+         + F+I++    K G++ KA E I  M+    + 
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 260

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  ++  +IHG+  +  ++ A ++ D M   G   D+  Y  +I G+CK  +LE A  L+
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS--- 285
            +M   G+ P+    + LI    ++G+L       + D  V    +   S   +LV    
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS--YRDEMVKKGIMPSVSTYNLLVHALF 378

Query: 286 -NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G + +A ++++ M K               KG + P+  +++I+IN   + G    A 
Sbjct: 379 MEGRMGEADDMIKEMRK---------------KGII-PDAITYNILINGYSRCGNAKKAF 422

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L  EM   G       Y +LI  L   NR++E+ +L  ++ + G  P     N+M    
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 405 CRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           C   +V  A  L+++M  +   P  V  NTL+ +  C+ GK  EA   L +M + G  PD
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLM-QGRCREGKVEEARMLLDEMKRRGIKPD 541

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            + Y+  I G      +  A  +  ++ + G  P ++ YN +I  LCK Q    AE+L  
Sbjct: 542 HISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 601

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNID 551
           EM+ KG+ P  +TY  LI G    GN+D
Sbjct: 602 EMVNKGISPDDSTYLSLIEGM---GNVD 626


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 259/598 (43%), Gaps = 27/598 (4%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           +A  LFD++   G+  P+   Y   +  LCK    D     L +M++ G     +T   +
Sbjct: 206 DAVRLFDEMAGAGV-KPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSV 264

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDDCN 165
           + V    G+ D+AL + ++++        VF  + L+  +   GE+ KA +L +      
Sbjct: 265 VDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDG 324

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +     T+ VLI G   +   D+  +L  +M + G       ++++I GL +NKQ E A+
Sbjct: 325 VTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAI 384

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRI 282
            L+  +  +G+ PD      LI   S   ++   V  +W+   +  V    + C+S++  
Sbjct: 385 ALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAV-NLWDKMKEAGVKPSIVTCHSLLLG 442

Query: 283 LVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
               G +D+A  L   M  KG P                 PN  ++  ++   +K    D
Sbjct: 443 YCEKGCMDEALKLYSEMPGKGFP-----------------PNEVTYTTLMKGYIKKKAFD 485

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A +L  EM Q G     + YN LI+GLC  +R+ E  E+L+     GF PT  T NS+ 
Sbjct: 486 KAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSII 545

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
               +   +  AL + R+M  +G  P +   T  I   C+      A + L  M   G  
Sbjct: 546 NGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIH 605

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PDI  Y+A I        +  AL     +   G  P+V  YN  ++G    + +AEA   
Sbjct: 606 PDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKF 665

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           +  MI + +      Y  LI+G+ K GN+  A+   S ML   +  PD  T+T L  GLC
Sbjct: 666 YYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHN-IPDDKTFTALTHGLC 724

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            +G  D A  L ++M      PN +T+  LI    +  + + A      M   G+ PD
Sbjct: 725 RSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPD 782



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 246/531 (46%), Gaps = 22/531 (4%)

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           ++ ++  G V D    + LLVA ++      A  L + M       + K + V++   V 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFE 241
                 A++LFD+M  +G   D  +Y + I GLCK +  + A+Q+  +M+ +G+ P DF 
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 242 ILS--KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             S   ++       E   L  ++           L  ++M+    +G I +A +L    
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                +  V+P   ++ ++I     +G  D    L R+M + G + + 
Sbjct: 321 V----------------RDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPST 364

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           + +N +I GL  + + E++  L   + ++G  P  FT   +   L +   V  A+NL  K
Sbjct: 365 YEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDK 423

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+  G +P +     L+   C+ G   EA +  ++M  +GF P+ V Y+  + G I  K 
Sbjct: 424 MKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKA 483

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            D A  L  ++  +G       YNI+I+GLC   RV E +++    +++G +P+  TYN 
Sbjct: 484 FDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNS 543

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +ING+ K+G +  A+    +M EK   +P+++TYT+ IDG C     D A+ L   M   
Sbjct: 544 IINGFVKAGMMGSALAMYRQMCEK-GITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCN 602

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G  P+   + A I   CK      AL    ++ + G+ P++ V+ + ++ +
Sbjct: 603 GIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 228/513 (44%), Gaps = 31/513 (6%)

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
            RM    +  + K+   L+    + +    AL LFD+M   G+ +DA MYDV++      
Sbjct: 142 SRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVG 201

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLC 276
           +    A++L+ EM G+G+ PD  + +  IT      +    V+ + + R+  +       
Sbjct: 202 RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           NS++ +LV  G +D+A  L   M+        G +M +    T          ++     
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQMLLA-----TGKKMDVFLATT----------LMQGYCL 306

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G++  AL LF E  + G       Y  LI G       +E+Y+L R+M E G  P+ + 
Sbjct: 307 HGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE 366

Query: 397 LNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            N + + L R    +D +   +LV    V    P V     LI  L KH K  EA     
Sbjct: 367 FNLVIKGLLRNKQWEDAIALFDLV----VDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWD 422

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M + G  P IV   + + G  +   +D AL+L+ ++   G  P+ V Y  ++ G  K +
Sbjct: 423 KMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKK 482

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
              +A  L NEM   G+     TYN+LING C    + +    L R +  E   P  +TY
Sbjct: 483 AFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVS-EGFVPTTMTY 541

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK---CDRPRAALVHFRM 630
            ++I+G   AG    A+ ++ +M EKG  PN +T+ + I G C+   CD     L++ R 
Sbjct: 542 NSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRC 601

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
               G+ PD+  + A I+ F  + N   A   L
Sbjct: 602 ---NGIHPDIAAYNAFINMFCKQGNMSHALHFL 631



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 248/547 (45%), Gaps = 71/547 (12%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE--MQDYGWGYDKYTLTPLLQVYCNSG 115
           RE    P +++YN +++ L K   +D   +RLK+  +   G   D +  T L+Q YC  G
Sbjct: 250 REAGLKPRDFTYNSVVDVLVKVGRMDEA-LRLKDQMLLATGKKMDVFLATTLMQGYCLHG 308

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           +  KAL +F+E +  G    +V +++L+      G  D+  +L  +M +  +  +   F 
Sbjct: 309 EIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFN 368

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           ++I G ++  + + A+ LFD +  +G   D   Y  +I  L K+ ++  A+ L+ +MK +
Sbjct: 369 LVIKGLLRNKQWEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEA 427

Query: 235 GITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           G+ P       L+       C DE  L L  +   +    N +T    ++M+  +   + 
Sbjct: 428 GVKPSIVTCHSLLLGYCEKGCMDEA-LKLYSEMPGKGFPPNEVTY--TTLMKGYIKKKAF 484

Query: 290 DQAYNLLQAM---------------IKGEPIADVGVEMLMIFKGTVS----PNTSSFDII 330
           D+AY LL  M               I G  + D   E+  + K  VS    P T +++ I
Sbjct: 485 DKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSI 544

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           IN  +K G +  AL+++R+M + G   N+  Y + IDG C +N  + + +LL  M  +G 
Sbjct: 545 INGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGI 604

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK-HNTLLIKELCKHGKAM-EA 448
            P     N+     C++ ++  AL+ +  +   G  P V  +N+ +     K+ K M EA
Sbjct: 605 HPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY--KNLKMMAEA 662

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA--------------HG 494
            +F   M+++    D   Y+  I G   +  V  ALEL+ ++ A              HG
Sbjct: 663 SKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHG 722

Query: 495 ---------------------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
                                 CP+ V YN++I+   +  ++ EA  L ++M++ G++P 
Sbjct: 723 LCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPD 782

Query: 534 VATYNLL 540
             TYN+ 
Sbjct: 783 DTTYNIF 789



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 8/356 (2%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M+ +G V    S  D+++ T       D AL+LF EM   G   +  +Y+ ++   C   
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAAD-ALTLFDEMRCKGYYADAKMYDVVMRA-CVVG 201

Query: 374 RLE-ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           R+  ++  L  EM  +G KP           LC+ +D   A+ ++ KMR  G +P     
Sbjct: 202 RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261

Query: 433 TLLIKELCKHGKAMEAFRFLTDMV-QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             ++  L K G+  EA R    M+   G   D+   +  + G      +  AL+LF +  
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAV 321

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVA-EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             G  P  V Y ++I G C A+ +  E   L  +MI +GL+PS   +NL+I G  ++   
Sbjct: 322 RDGVTPTNVTYTVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           + A+      L  ++G PDV TY  LI  L    +  +A+ LW++M+E G  P+ +T  +
Sbjct: 381 EDAIALFD--LVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHS 438

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+ G C+      AL  +  M  KG  P+   +  L+  ++ +     A+ +L EM
Sbjct: 439 LLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEM 494


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 54/449 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +++       +  +AL+L  +M +     +A  Y+ +I G C   +++ AL +  EM
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 232 K-GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   GI P+      +I+               W           C          G +D
Sbjct: 99  RERGGIAPNQYTYGTVISG--------------W-----------CKV--------GRVD 125

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +   M+                KG V P    ++ +I      GKLD AL     M
Sbjct: 126 EAVKVFDEMLT---------------KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 170

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G    V  YN L+  L    R  E+YEL+ EM   G  P  FT N +    C+  +V
Sbjct: 171 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 230

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL +   M  +G    V   T LI  L K G+  E  +   + V+ G  PD+V Y+A 
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +D A E+  ++      PD V YN ++ GLC   RV EA  L +EM  +G+
Sbjct: 291 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 350

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYN LI+G+   G++  A+   + M+ K   +P ++TY  LI GLC  G+ DDA 
Sbjct: 351 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAE 409

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +  EM E G  P+  T+++LI GL   D
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGLTTED 438



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 188/397 (47%), Gaps = 25/397 (6%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T   N ++R L S G   +A  LL+ M +                    PN  +++ +I 
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMPR--------------------PNAVTYNTVIA 80

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESG-F 390
                G++  AL + REM + G +  N + Y  +I G C   R++E+ ++  EM   G  
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           KP     N++    C +  +  AL    +M  +G    V    LL+  L   G+  EA+ 
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            + +M  +G  PD+  Y+  I G      V  ALE+F ++   G    VV Y  +I  L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K  +V E + LF+E + +G+ P +  YN LIN    SGNID+A   +  M EK+  +PD 
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDD 319

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHFR 629
           +TY TL+ GLC+ GR D+A  L +EM ++G  P+ +T+  LI+G   K D   A  +   
Sbjct: 320 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 379

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           MM  KG  P +  + ALI           A  ++KEM
Sbjct: 380 MMN-KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           AP   L  D+ + R  +       ++R L S G    A  L  Q+ R     PN  +YN 
Sbjct: 23  APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNT 77

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           ++   C    V      ++EM++ G    ++YT   ++  +C  G+ D+A+ VF+E++  
Sbjct: 78  VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 137

Query: 131 GWVDEH--VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           G V     +++ L+  +   G++D A    +RM +  + +   T+ +L+H      R  +
Sbjct: 138 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 197

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M   G A D   Y+++I G CK   ++ AL+++  M   G+       + LI 
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S +G++    K   E   R +    +L N+++    ++G+ID+A+ ++  M K     
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR--- 314

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+  +++ ++  L   G++D A  L  EMT+ G   ++  YN LI
Sbjct: 315 -------------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      ++++  +  EM   GF PT  T N++ + LC+      A N+V++M   G  
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421

Query: 427 P 427
           P
Sbjct: 422 P 422



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  +F+ + R G+      +Y  L+ AL K   V   +    E    G   D   
Sbjct: 228 GNVKKALEIFENMSRRGVRA-TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 286

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +  SG  D+A  +  E+       D+  ++ L+      G VD+A +LI+ M 
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 346

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I+ +  T+  LI G+  K  V  AL++ ++M   GF      Y+ +I GLCKN Q +
Sbjct: 347 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 406

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A  +  EM  +GITPD      LI   + E E
Sbjct: 407 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 225/484 (46%), Gaps = 31/484 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           +F  L+ G  K     +   L+++M  SG +SD    ++++  LC   +L      ++ +
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130

Query: 232 KGSGITPDFEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
              G +P+    + LI         S+   L L ++++    DV T      ++++ L  
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY----GTLIKGLCG 186

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
            G+I+ A  L Q M+      D+       ++    PN  +++II++ L K G+ D A  
Sbjct: 187 TGNINIALKLHQEMLN-----DISR-----YEINCKPNVITYNIIVDGLCKVGREDEAKQ 236

Query: 346 LFREMTQIGCMQNVFL----------YNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           LF EM   G + N  L          +N LID LC   ++ E+ +LL  M ESG  P   
Sbjct: 237 LFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 296

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T NS+    C   D+  A  L   M  +G EP V    +LI    K  K  EA +   +M
Sbjct: 297 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 356

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +  G  P+++ Y + + G+    +VD A +LF  + AHG   +   Y I + GLCK   +
Sbjct: 357 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 416

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  LF E+ +      +   N LI+G CK+G ++ A     + L  E   P+V+TYT 
Sbjct: 417 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK-LSNEGHEPNVVTYTI 475

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           +I G C  G+ D A +L  +ME  GC P+ IT+  L+ G  + ++    +     M +K 
Sbjct: 476 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 535

Query: 636 MKPD 639
           + PD
Sbjct: 536 VSPD 539



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 223/506 (44%), Gaps = 87/506 (17%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL  F  M +S      + ++ ++ GL K K       LY++M+ SG++ D   L+ L+ 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 249 SCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
              +   L          +      N +T   N++++ L     I +A  L   M K   
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTY--NTLIKGLCMEHRISEATRLFLRMQK--- 167

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM------TQIGCMQN 358
              +G           +P+  ++  +I  L   G +++AL L +EM       +I C  N
Sbjct: 168 ---LGC----------TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V  YN ++DGLC   R +E+ +L  EM+  G  P                          
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN------------------------- 249

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  QG +P +    +LI  LCK GK +EA + L  M++ G +PD+V Y++ I G   + 
Sbjct: 250 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 309

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            ++ A ELF  + + GC PDV++YN++I+G  K  +V EA  L+NEM+  G  P+V TY+
Sbjct: 310 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 369

Query: 539 LLINGWCKSGNIDQAMLCLSRM----------------------------------LEKE 564
            L+ G   +G +D A    S M                                  L+  
Sbjct: 370 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 429

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           +   ++     LIDGLC AG+ + A  L+ ++  +G  PN +T+  +I G C+  +   A
Sbjct: 430 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 489

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
            V  + M+  G  PD+  +  L+  F
Sbjct: 490 NVLIQKMEANGCTPDIITYNTLMRGF 515



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 132/571 (23%), Positives = 240/571 (42%), Gaps = 52/571 (9%)

Query: 17  LAQDVVKSRCFMSPGA-LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           L+     S    SP   + F +R   +  +     + F  +       P+  S+N LL  
Sbjct: 19  LSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSG 78

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
           L K      V     +M+  G   D+ TL  LL   CN  +  +  + F  I+  G+   
Sbjct: 79  LAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPN 138

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            V ++ L+        + +A  L  RM       +  T+  LI G      ++ AL+L  
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198

Query: 195 KMTKS------GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           +M             +   Y++I+ GLCK  + + A QL+ EMK  G+ P+ E+L     
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN-EML----- 252

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                            D+ +    +  N ++  L   G + +A  LL  MI+   + D+
Sbjct: 253 -----------------DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 295

Query: 309 --------GVEML------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                   G  M+            M  KG   P+  S++++IN   K  K++ A+ L+ 
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKG-CEPDVISYNVLINGYSKTLKVEEAMKLYN 354

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM  +G   NV  Y++L+ G+  + +++++ +L   M+  G     +T       LC+  
Sbjct: 355 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 414

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A+ L  +++    +  +++   LI  LCK GK   A+     +  EG  P++V Y+
Sbjct: 415 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 474

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G     +VD A  L + + A+GC PD++ YN ++ G  ++ ++ E   L + M  K
Sbjct: 475 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 534

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            + P   T +++++   K     + +  L R
Sbjct: 535 DVSPDAITCSIVVDMLSKDEKYQECLHLLPR 565



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 142/339 (41%), Gaps = 50/339 (14%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL  F  M +     ++  +N+L+ GL       + + L  +M  SG      TLN +  
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           CLC           V ++R                         E F     +++ G+ P
Sbjct: 113 CLCN----------VNRLR-------------------------EGFAAFAGILRRGYSP 137

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +IV Y+  I GL    R+  A  LF  +   GC PDVV Y  +I GLC    +  A  L 
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197

Query: 523 NEMITK------GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK---------ESGS 567
            EM+           P+V TYN++++G CK G  D+A      M  +         +   
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQ 257

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD++T+  LID LC  G+  +A  L   M E G  P+ +T+ +LI G C      +A   
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  M  KG +PD+  +  LI+ +   L    A ++  EM
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 356



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 179/399 (44%), Gaps = 61/399 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNN----------YSYNCLLEALCKSCSVDLV 85
           ++  L  VG  +EA  LF+++K +G+ +PN            ++N L++ LCK   V   
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGM-IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
           +  L  M + G   D  T   L++ +C  G  + A  +F  +   G   + + +++L+  
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           +SK  +V++A +L   M     R N  T+  L+ G     +VD A +LF  M   G A +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           +  Y + + GLCKN  L  A++L++E+K S    + E L+ LI                 
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG--------------- 444

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                     LC +        G ++ A+ L       E +++ G E          PN 
Sbjct: 445 ----------LCKA--------GKLETAWELF------EKLSNEGHE----------PNV 470

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I+I+   ++G++D A  L ++M   GC  ++  YN L+ G   SN+LEE  +LL  
Sbjct: 471 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 530

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
           M +    P   T + +   L + +     L+L+ +  +Q
Sbjct: 531 MAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQ 569



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 440 CKHGK--AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
           CK G   A  A  F   M++    P +  ++  + GL  IK       L+  +   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D    NI+++ LC   R+ E    F  ++ +G  P++ TYN LI G C    I +A    
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM------EEKGCAPNRITFMAL 611
            RM +K   +PDV+TY TLI GLC  G  + A+ L  EM       E  C PN IT+  +
Sbjct: 163 LRM-QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGM----------KPDMFVFVALISAFLSE 653
           + GLCK  R   A   F  MK +GM          +PDM  F  LI     E
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKE 273


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 209/457 (45%), Gaps = 58/457 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  +  GF K  R+++  +++  M ++G+   A+ Y ++I  LCK    + A +L   M
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
           +                                  +      +  ++I+  L     +++
Sbjct: 72  R---------------------------------LKRFKRKAIAYSTIINWLCKLNRVEE 98

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  L++ M +  P                 P+  ++  I+  L K  ++D AL+   EM 
Sbjct: 99  ARELIEKMARYAP-----------------PDALTYGPIVERLCKTKRIDDALATVEEMA 141

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             G   + F+YN ++ GLC   ++EE+  L  +M +    P   T N++   LC+   + 
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201

Query: 412 GALNLVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            A  L ++M  +G+ P  V +NTL I   CK    + A      MV+   +P++V Y+  
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTL-IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL    +V  A E+   +   G  P+V  Y+ +I G CK +RV EA  L  +M+T+G+
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V TYN+L+N  C++  ++ A   L R + +    P V+TY TL+  LC   + D A 
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFK-LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
            L+ EM  KGC P+ IT+  L  GL      RA  VH
Sbjct: 380 RLYAEMIAKGCPPDAITYDTLAWGLT-----RAGKVH 411



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 6/356 (1%)

Query: 315 IFKGTVSPN----TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           +++G V        S + I+I+ L K G  D A  L   M      +    Y+ +I+ LC
Sbjct: 32  VYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLC 91

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             NR+EE+ EL+ +M      P   T   +   LC+ + +  AL  V +M  +G +P   
Sbjct: 92  KLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF 150

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               ++  LC+  K  EA      MV++   P++V Y+  I GL    R++ A ELF+++
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  P  V+YN +I G CK + +  A+D+F++M+    +P+V TY  LI+G  KSG +
Sbjct: 211 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 270

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A   L  M++K   +P+V TY+ LIDG C   R D+A  L  +M  +G AP  +T+  
Sbjct: 271 QAAAEVLDGMVKK-GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+  LC+ D+   A   FR M ++   P +  +  L+ A         A  +  EM
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 385



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 2/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P  ++F+ + +   K G+L+    +++ M + G       Y  LI  LC     +E+Y
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL  M    FK      +++   LC+   V  A  L+ KM  +   P       +++ L
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  +  +A   + +M   G  PD   Y+  + GL   ++V+ A  LF  +      P+V
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN +I+GLCKA R+  A +LF EM  KG +P+  +YN LI+G+CK  ++  A     +
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M+ + +  P+V+TYTTLIDGL  +G+   A  + + M +KG  PN  T+  LI G CK  
Sbjct: 245 MV-RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A      M  +G+ P +  +  L+++         AF++ + M
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 21/390 (5%)

Query: 260 VKEIWEDRDVNTMTLLCNS---IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
           VKE+++       TL  +    ++  L   G+ D+AY LL  M             L  F
Sbjct: 29  VKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM------------RLKRF 76

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K        ++  IIN L K  +++ A  L  +M +     +   Y  +++ LC + R++
Sbjct: 77  K----RKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRID 131

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++   + EM   G KP  F  N +   LC+ + V  A  L  KM  Q   P V     LI
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LCK  +   A+    +M  +G++P  V Y+  I G    K +  A ++F  +    C 
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y  +I GL K+ +V  A ++ + M+ KG+ P+VATY+ LI+G+CK   +D+A   
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L +M+  +  +P V+TY  L++ LC A + +DA  L+  M ++ C P  +T+  L+  LC
Sbjct: 312 LEQMVT-QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
              +   A   +  M  KG  PD   +  L
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 184/426 (43%), Gaps = 19/426 (4%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ +   F+K G +++  E+ + M +    L    + +LI    K    D+A +L   M
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
               F   A  Y  II  LCK  ++E A +L  +M      PD      ++        +
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRI 130

Query: 257 --TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              L   E    R +     + N ++  L     +++A  L + M+K             
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR----------- 179

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                ++PN  +++ +IN L K  +++ A  LF+EM   G +     YN LIDG C    
Sbjct: 180 -----INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L  + ++  +M  S   P   T  ++   L +   V  A  ++  M  +G  P V   + 
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI   CK  +  EA + L  MV +G  P +V Y+  +  L    +++ A +LFR +    
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P VV YN ++  LC  +++  A  L+ EMI KG  P   TY+ L  G  ++G + +A 
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414

Query: 555 LCLSRM 560
             + +M
Sbjct: 415 ELMEKM 420



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 201/441 (45%), Gaps = 41/441 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEA-----NMLFDQ 55
           +A   ++A R+  ++ + Q +V++   +     G LI CL  VG  +EA      M   +
Sbjct: 16  VADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKR 75

Query: 56  VKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSG 115
            KR+ +      +Y+ ++  LCK   V+     +++M  Y    D  T  P+++  C + 
Sbjct: 76  FKRKAI------AYSTIINWLCKLNRVEEARELIEKMARYAPP-DALTYGPIVERLCKTK 128

Query: 116 QFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
           + D AL+   E+   G   D  +++ +L    +  +V++A  L E+M    I  N  T+ 
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI+G  K  R++ A +LF +M   G+      Y+ +I G CK K L  A  ++ +M  S
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNG 287
              P+    + LI   S  G++     E+ +         +V T + L +   ++     
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQ-AAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR---- 303

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D+A+ LL+ M+                   ++P   +++I++N+L +  KL+ A  LF
Sbjct: 304 RVDEAHKLLEQMV----------------TQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
           R M Q  C   V  YN L+  LC+  +L+ ++ L  EM   G  P   T +++   L R 
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407

Query: 408 QDVVGALNLVRKMRVQGHEPW 428
             V  A  L+ KM++    P+
Sbjct: 408 GKVHEAQELMEKMKLTKRNPF 428



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 35/163 (21%)

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE-----KESG------------- 566
           M  + +IP  AT+N + +G+ K+G ++Q       M+E     + SG             
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 567 ----------------SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
                               I Y+T+I+ LC   R ++A  L  +M  +   P+ +T+  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           ++  LCK  R   AL     M  +G+KPD F++  ++S    E
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE 162


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 239/518 (46%), Gaps = 34/518 (6%)

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASD 204
            K   +D+A +L + M       + K F +L+   V+      A+ L   M  S G  +D
Sbjct: 52  GKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEAD 111

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV---- 260
               +++I  LC+ K +     +   M   G+ P    L+ LI     +G +   V    
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171

Query: 261 --KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
             +++W   DV T  +L N + +                    G+ +A VG  +  + + 
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCK-------------------TGDTLAAVG-WLRKMEER 211

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PN   +  I++ L KDG +  AL+L  EM   G   N+  Y  LI GLCN  R +E+
Sbjct: 212 NWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEA 271

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             LL EM + G +P    LN +    C+   V+ A +++  M + G  P V     LI  
Sbjct: 272 GSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHI 331

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            C   K  EA R    MV  G LPDIV +++ I G    K ++ A+ L  ++   G  PD
Sbjct: 332 YCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPD 391

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           V  +  +I G C+A R   A++LF  M   G +P++ T  ++++G CK   + +A + L+
Sbjct: 392 VATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEA-VSLA 450

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK- 617
           + +EK +   +++ Y+ L+DG+C AG+ + A  L++ +  KG   N   +  +I GLCK 
Sbjct: 451 KAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQ 510

Query: 618 --CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              D+    L++   M+E G  P+   +   +   L++
Sbjct: 511 GSLDKAEDLLIN---MEENGCLPNNCTYNVFVQGLLTK 545



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 207/453 (45%), Gaps = 20/453 (4%)

Query: 217 KNKQLEMALQLY---SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           K K ++ AL L+   + MK      DF +L   I           LVK ++    +   T
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N ++  L     +   +++L  M K      +G+E          P   +   +IN 
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFK------LGLE----------PTVMTLTTLING 156

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   G +  A+ L   M ++    +V+ Y  LI+GLC +     +   LR+MEE  +KP 
Sbjct: 157 LCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPN 216

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               +++   LC+   V  ALNL  +M  +G  P +     LI+ LC  G+  EA   L 
Sbjct: 217 VVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLD 276

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M++ G  PD+   +  +       +V  A  +   +   G  PDV  YN +I   C   
Sbjct: 277 EMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           ++ EA  +F+ M+++G +P +  +  LI+GWCK  NI++AM  L  M  K    PDV T+
Sbjct: 337 KMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEM-SKMGFVPDVATW 395

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           TTLI G C AGRP  A  L+  M + G  PN  T   ++ GLCK +    A+   + M++
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEK 455

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +  ++ ++  L+    S      A+E+   +
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 234/536 (43%), Gaps = 39/536 (7%)

Query: 41  GSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK----SCSVDLVEMRLKEMQDYG 96
           G +  ++EA  LF  + R    +P+   +  LL A+ +    + ++ LV+     +   G
Sbjct: 52  GKLKNIDEALDLFQGMARMK-PLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSL---G 107

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKA 154
              D  TL  ++   C         SV   +   G ++  V ++  L+      G V +A
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLG-LEPTVMTLTTLINGLCVQGNVAQA 166

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M+     L+  T+ VLI+G  K      A+    KM +  +  +  +Y  I+ G
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE---DRD 268
           LCK+  +  AL L SEM G G+ P+    + LI    + G   E   L+ E+ +     D
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSF 327
           +  + +L ++  +     G + QA +++  MI  GE                  P+  ++
Sbjct: 287 LQMLNILVDAFCK----EGKVMQAKSVIGFMILTGE-----------------GPDVFTY 325

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + +I+      K++ A+ +F  M   G + ++ ++ +LI G C    + ++  LL EM +
Sbjct: 326 NSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSK 385

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            GF P   T  ++    C+    + A  L   M   G  P ++   +++  LCK     E
Sbjct: 386 MGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSE 445

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M +     +IV YS  + G+    +++ A ELF  +   G   +V  Y I+I 
Sbjct: 446 AVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIK 505

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           GLCK   + +AEDL   M   G +P+  TYN+ + G      I +++  L+ M +K
Sbjct: 506 GLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 219/521 (42%), Gaps = 39/521 (7%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR---L 89
           LG ++R       +     +F  +  E   +  N   NCL       C + LV      L
Sbjct: 83  LGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCL-------CRLKLVAFGFSVL 135

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW--VDEHVFSILLVAFSK 147
             M   G      TLT L+   C  G   +A+ + + + +  W  +D + + +L+    K
Sbjct: 136 GTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM-EKMWYPLDVYTYGVLINGLCK 194

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            G+   A   + +M++ N + N   +  ++ G  K   V +AL L  +M   G   +   
Sbjct: 195 TGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVT 254

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW--- 264
           Y  +I GLC   + + A  L  EM   G+ PD ++L+ L+ +   EG++      I    
Sbjct: 255 YACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMI 314

Query: 265 ---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
              E  DV T     NS++ I      +++A  +                 LM+ +G + 
Sbjct: 315 LTGEGPDVFTY----NSLIHIYCLQNKMNEAMRVFH---------------LMVSRGRL- 354

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   F  +I+   KD  ++ A+ L  EM+++G + +V  +  LI G C + R   + EL
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKEL 414

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              M + G  P   T   +   LC+   +  A++L + M     +  +   ++L+  +C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCS 474

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK   A+   + +  +G   ++  Y+  I GL     +D A +L  ++  +GC P+   
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCT 534

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           YN+ + GL   + +A +      M  KG     AT   +IN
Sbjct: 535 YNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 2/172 (1%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  LF  + + G  VPN  +   +L+ LCK   +       K M+      +    + LL
Sbjct: 411 AKELFLNMHKYGQ-VPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILL 469

Query: 109 QVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
              C++G+ + A  +F+ +   G  ++ ++++I++    K G +DKA +L+  M++    
Sbjct: 470 DGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCL 529

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            N  T+ V + G + K  + ++++    M   GF+ DAA  + II  L  N+
Sbjct: 530 PNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNE 581


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 260/577 (45%), Gaps = 40/577 (6%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           M S   RA ++A  R LA  V      + P A  +  ++R L + G + +A  + D+++R
Sbjct: 89  MVSGYCRAGQLASARRLAASVP-----VPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY---GWGYDKYTLTPLLQVYCN-S 114
            G C P    Y+ +LEA C           ++ +QD    G   D      +L   C+  
Sbjct: 144 RG-CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 115 GQFDKALSVFNEIIDHGWVDEHVFS---IL--LVAFSKWGEVDKACELIERMDDCNIRLN 169
           G  D+AL +  ++      D  V S   +L  L    +WG V    +L+E M       N
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQ---DLMEEMVRVGCPPN 259

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
             TF  LI    +    ++  Q+  +M   G   D  MY  ++ G+CK   LE+A ++  
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319

Query: 230 EMKGSGITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            M   G+ P+    + ++   CS E   +   L+ E++ D D     +  N ++     N
Sbjct: 320 RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF-DNDCPLDDVTFNILVDFFCQN 378

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G + +   LL+ M++                G V P+  ++  +IN   K+G +D A+ L
Sbjct: 379 GLVYRVIELLEQMLE---------------HGCV-PDVITYTTVINGFCKEGLIDEAVML 422

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
            + M   GC  N   Y  ++ GLC++ R  ++ +L+ +M E G  P   T N++   LC+
Sbjct: 423 LKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCK 482

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
           +  V  A+ L+++M + G  P +   + +I  L K GK  EA   L  MV +G  P+ + 
Sbjct: 483 KGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 542

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YS+    L    R++  +++F +I       D V YN +IS LCK      A +    M+
Sbjct: 543 YSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMV 602

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           + G +P+ +TY +LI G    G + +A   L+ +  K
Sbjct: 603 SSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSK 639



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 138/590 (23%), Positives = 262/590 (44%), Gaps = 32/590 (5%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L+ L++  C +G+  +A    +     G      ++ ++  + + G++  A  L   +  
Sbjct: 52  LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVP- 110

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ--- 220
             +  N  T+  ++     + R+  AL + D+M + G A    MY VI+   C       
Sbjct: 111 --VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLC 276
              A+++  ++ G G   D    + ++ +  D+G    E   L++++      +   +  
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIK-GEPIADVGVEML-------------------MIF 316
           N++++ L       +  +L++ M++ G P   V    L                   M+ 
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
            G  +P+   +  +++ + K+G L++A  +   M   G   NV  YN ++ GLC++ R E
Sbjct: 289 HGC-TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWE 347

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ ELL EM ++       T N +    C+   V   + L+ +M   G  P V   T +I
Sbjct: 348 QAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVI 407

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK G   EA   L  M   G  P+ + Y+  + GL   +R   A +L   +   GC 
Sbjct: 408 NGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCS 467

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+ V +N +I+ LCK   V +A +L  +M+  G  P + +Y+ +I+G  K+G  D+A+  
Sbjct: 468 PNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALEL 527

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L+ M+ K   SP+ I Y+++   L   GR +  I +++ +++     + + + A+I+ LC
Sbjct: 528 LNVMVNK-GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K      A+     M   G  P+   +  LI    SE     A E+L E+
Sbjct: 587 KRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 20/355 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E A+ + D++   GL  PN   YN +L+ LC +   +  E  L EM D     D  T
Sbjct: 309 GHLEVAHEILDRMPSYGL-KPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVT 367

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C +G   + + +  ++++HG V D   ++ ++  F K G +D+A  L++ M 
Sbjct: 368 FNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMA 427

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C  R N  ++ +++ G     R   A  L  +M + G + +   ++ +I  LCK   +E
Sbjct: 428 ACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVE 487

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIM 280
            A++L  +M  +G +PD    S +I      G+    L +  +  ++ ++  T++ +SI 
Sbjct: 488 QAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 547

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G I++   +       + I DV          T+  +   ++ +I++L K G  
Sbjct: 548 SALSKEGRINRVIQMF------DNIQDV----------TIRSDAVLYNAVISSLCKRGGT 591

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           D A+     M   GCM N   Y  LI GL +   ++E+ E+L E+   G    HF
Sbjct: 592 DRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHF 646


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 235/476 (49%), Gaps = 35/476 (7%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+  ++ G     + ++A +L  +M ++    +   +   I   C+N  L+ A++L  +M
Sbjct: 9   TYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 68

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G TPD  I S L+   S+ G +   +K +      NTM    N++            
Sbjct: 69  PKYGCTPDVIIYSTLVNGFSEHGRVDEALKLL------NTMLCRPNTV------------ 110

Query: 292 AYNLLQAMIKGEPIA----DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            YN   A +KG  IA    +VG  +  + +    PN ++F  +IN+L ++  ++ A+ + 
Sbjct: 111 CYN---AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVL 167

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            +M + G M +V  YN +I    +  R +++ +LL+ M     KP   + N++ +CLC+ 
Sbjct: 168 EQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLCKA 224

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +    A+ LV KM  +          +LI  LC++G+  +A      M +   +PDIV Y
Sbjct: 225 KRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTY 284

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           S+ I G  +    ++A +LFR +    C  D+ +YN  + GLC A R  +A +L  +M+T
Sbjct: 285 SSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVT 341

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +  +P+  T+N+LI+  C+ G +++A+    +M  K   +PD+ TY  LI+G    GR D
Sbjct: 342 EDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM-PKYGITPDIFTYNALINGYSEQGRLD 400

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           DA+   + M    C P+ I++ +++ GLC+ +R + A      M  K   P+   F
Sbjct: 401 DALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 223/476 (46%), Gaps = 27/476 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ Y+YN +L+ LC +   +  E  ++EM       ++ T    ++ +C +G  D+A+ 
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  ++  +G   D  ++S L+  FS+ G VD+A +L+  M     R N   +   + G  
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGLC 120

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              R ++  +L  +M +     + A +  +I  LC+N+ +E A+++  +M+  G  PD  
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + +I+  SD+      +K + +       T+  N++++ L        A  L+  M+K
Sbjct: 181 SYNTIISCFSDQARADDALK-LLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLK 239

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            +                   N  +F+I+I++L ++G++  A+ +F  M +  CM ++  
Sbjct: 240 KD----------------CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVT 283

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y++LI+G       E +++L R M     +   F+ N+  + LC       A  L+  M 
Sbjct: 284 YSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMV 340

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P      +LI  LC+ G    A      M + G  PDI  Y+A I G  +  R+D
Sbjct: 341 TEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLD 400

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            AL+    +    C PD ++YN I+ GLC+A+R  +AE L  EM+ K   P+  T+
Sbjct: 401 DALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 203/449 (45%), Gaps = 59/449 (13%)

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
           A D   Y+ ++ GLC  KQ E A +L  EM  +   P+               E+T   +
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPN---------------EVTFATQ 48

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                             +R    NG +D+A  LL+ M K     DV +           
Sbjct: 49  ------------------IRAFCQNGLLDRAVELLEQMPKYGCTPDVII----------- 79

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
                +  ++N   + G++D AL L   M    C  N   YN  + GLC + R EE  EL
Sbjct: 80  -----YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGEL 131

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           + EM      P   T +++   LC+ + V  A+ ++ +M+  G+ P V     +I     
Sbjct: 132 IAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSD 191

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
             +A +A + L  M+ +   PD + ++A +  L   KR   A+EL   +    C  + + 
Sbjct: 192 QARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMT 248

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +NI+I  LC+  +V +A ++F  M     +P + TY+ LING+ + G +D+    L R +
Sbjct: 249 FNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG-LDEMAFDLFRSM 307

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
              +   D+ +Y   + GLC+A R DDA  L  +M  + C PN +TF  LI+ LC+    
Sbjct: 308 PCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLV 364

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A+  +  M + G+ PD+F + ALI+ +
Sbjct: 365 NRAIDVYEQMPKYGITPDIFTYNALINGY 393



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 157/309 (50%), Gaps = 7/309 (2%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + + YN ++ GLC + + E++ EL+REM  +   P   T  +  R  C+   +  A+ L+
Sbjct: 6   DTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELL 65

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M   G  P V   + L+    +HG+  EA + L  M+     P+ VCY+AA+ GL   
Sbjct: 66  EQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIA 122

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            R +   EL  ++    C P+   ++ +I+ LC+ + V  A ++  +M   G +P V +Y
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N +I+ +      D A+  L  ML K    PD I++  ++  LC A R  DA+ L  +M 
Sbjct: 183 NTIISCFSDQARADDALKLLKSMLCK----PDTISFNAVLKCLCKAKRWYDAVELVAKML 238

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           +K C  N +TF  LI  LC+  + + A+  F +M +    PD+  + +LI+ F  +    
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 298

Query: 658 LAFEVLKEM 666
           +AF++ + M
Sbjct: 299 MAFDLFRSM 307



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 202/457 (44%), Gaps = 28/457 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  L  ++ R   C PN  ++   + A C++  +D     L++M  YG   D    + 
Sbjct: 24  EQAEELMREMIRNS-CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYST 82

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L+  +   G+ D+AL + N ++     +   ++  L      G  ++  ELI  M   + 
Sbjct: 83  LVNGFSEHGRVDEALKLLNTMLCRP--NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 140

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N+ TF  LI+   +   V+ A+++ ++M K G+  D   Y+ II       + + AL+
Sbjct: 141 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 200

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGE-LTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           L   M     T  F  + K +       + + L+ K + +D  +N MT   N ++  L  
Sbjct: 201 LLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTF--NILIDSLCQ 258

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           NG +  A  + + M K   + D+                 ++  +IN   + G  ++A  
Sbjct: 259 NGQVKDAIEVFELMPKYRCMPDI----------------VTYSSLINGFSEQGLDEMAFD 302

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LFR M    C  ++F YN  + GLC + R +++ EL+ +M      P   T N +   LC
Sbjct: 303 LFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 359

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  V  A+++  +M   G  P +     LI    + G+  +A +FL+ M  E   PD +
Sbjct: 360 QKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTI 416

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            Y++ + GL   +R   A +L  ++    C P+ V +
Sbjct: 417 SYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 4/205 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD   Y+  + GL   K+ + A EL R++  + C P+ V +   I   C+   +  A +L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             +M   G  P V  Y+ L+NG+ + G +D+A+  L+ ML +    P+ + Y   + GLC
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKGLC 120

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           IAGR ++   L  EM  K C PN  TF  LI  LC+      A+     M++ G  PD+ 
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  +IS F  +     A ++LK M
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSM 205



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 171/399 (42%), Gaps = 62/399 (15%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G  EE   L  ++ R+  C PN+ +++ L+ +LC++  V+     L++MQ YG+  D  
Sbjct: 122 AGRWEEVGELIAEMVRKD-CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           +   ++  + +  + D AL +   ++     D   F+ +L    K      A EL+ +M 
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKCLCKAKRWYDAVELVAKML 238

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
             + R+NE TF +LI    +  +V  A+++F+ M K     D   Y  +I G  +    E
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 298

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           MA  L+  M         +I S                                N+ ++ 
Sbjct: 299 MAFDLFRSMPCRA-----DIFSY-------------------------------NATLKG 322

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L      D A         GE IAD+  E  +       PN  +F+I+I++L + G ++ 
Sbjct: 323 LCMAARWDDA---------GELIADMVTEDCL-------PNEVTFNILISSLCQKGLVNR 366

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ ++ +M + G   ++F YN LI+G     RL+++ + L  M     +P   + NS+ +
Sbjct: 367 AIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILK 423

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEP----WVKHNTLLIK 437
            LCR +    A  LV +M  +   P    +   N L IK
Sbjct: 424 GLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 1/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +  +  S  I+IN      ++D  LS+  ++ ++G   ++  +  L++GLC   ++++  
Sbjct: 93  IEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVM 152

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            L  +M   G +P  +T N +   L +      AL  +++M   G  P V + + LI   
Sbjct: 153 MLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G+  EA      MV +G  P++  Y++ + G   I+R++ A++L  +    G  PD+
Sbjct: 213 CLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDI 272

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V +  IISGLC+A R   A+ LF  +   G  P++ TY +L++G CK GN+++A      
Sbjct: 273 VTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQE 332

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M ++ +  P+++ YT LID LC  G+  D   L++ + ++G  PN  T+ AL+  LCK  
Sbjct: 333 M-QRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEG 391

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A   FR M+E G  PD   +  +I  FL   +P +A ++++EM
Sbjct: 392 LIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 178/332 (53%), Gaps = 1/332 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P    F  + +++++ G  +  + L +E+  +G  Q++   + LI+  C+ +R++    +
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L ++ + G +P+  T  ++   LC    +   + L   M V+G +P V    ++I  L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GKA EA  FL  M + G +P++V YS  I G     ++D A  +F  + + GC P+V  
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  +++G CK +R+ EA  L +E + KGL+P + T+  +I+G C++G    A   L R +
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGR-PLAAQQLFRYI 298

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                +P+++TY  L+DGLC  G  ++A  L+ EM+     PN + +  LI  LCKC + 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +     F  + ++G+KP+++ + AL+ A   E
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 171/335 (51%), Gaps = 2/335 (0%)

Query: 306 ADVGVEML-MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
            D G+ +L  I K  + P+  +F  ++N L  +GK+D  + L+ +M   G   NV+ YN 
Sbjct: 113 VDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNV 172

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +I+ L  S +  E+   L++ME+ G  P     +++    C R  +  A ++   M  +G
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P V   T L+   CK  +  EA + L + +++G +PDIV ++  I GL    R   A 
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           +LFR ICAHG  P+++ Y +++ GLCK   + EA  LF EM    + P++  Y +LI+  
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G I       SR+++ E   P+V TYT L+  LC  G   +A  L+ +MEE GC P+
Sbjct: 353 CKCGKIKDGKELFSRLID-EGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +  +  +I G  +   P  A      M  +G   D
Sbjct: 412 KCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 176/438 (40%), Gaps = 84/438 (19%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           FS L  +  + G  +    L + ++   I  +  +  +LI+ F    RVD  L +  K+ 
Sbjct: 65  FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G       +  ++ GLC   +++  + LY +M   G+ P+                  
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPN------------------ 166

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                      V T  ++ NS+ +    +G  ++A   L+ M K      VG        
Sbjct: 167 -----------VYTYNVIINSLSK----SGKANEALGFLKQMEK------VGC------- 198

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               PN  ++  +I+     G++D A S+F  M   GC  NV+ Y +L++G C   R+EE
Sbjct: 199 ---VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEE 255

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + +LL E    G  P   T  ++   LCR    + A  L R +   GH P +    +L+ 
Sbjct: 256 AVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLD 315

Query: 438 ELCKHGKAMEAFRFLTDM-----------------------------------VQEGFLP 462
            LCKHG   EAF    +M                                   + EG  P
Sbjct: 316 GLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKP 375

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++  Y+A +G L     +  A +LFR +   GC PD  AYN+II G  + +  + A  L 
Sbjct: 376 NVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLV 435

Query: 523 NEMITKGLIPSVATYNLL 540
            EM+ +G     AT  LL
Sbjct: 436 EEMVNRGFSADAATRALL 453



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 175/410 (42%), Gaps = 50/410 (12%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           KE++  G   D ++L+ L+  +C+  + D  LSV ++I+  G     V F+ LL      
Sbjct: 86  KEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCME 145

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++D+   L + M    ++ N  T+ V+I+   K  + ++AL    +M K G   +   Y
Sbjct: 146 GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNY 205

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             +I G C   Q++ A  ++  M   G TP                             +
Sbjct: 206 STLIDGYCLRGQMDEARSVFDLMVSKGCTP-----------------------------N 236

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           V T T L N   +I      I++A  LL   ++               KG V P+  +F 
Sbjct: 237 VYTYTSLMNGYCKI----ERIEEAVQLLDETLR---------------KGLV-PDIVTFT 276

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II+ L + G+   A  LFR +   G   N+  Y  L+DGLC    LEE++ L +EM+ S
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             KP       +   LC+   +     L  ++  +G +P V   T L+  LCK G  +EA
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
            +    M ++G  PD   Y+  I G +  K   +A +L  ++   G   D
Sbjct: 397 HKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 167/364 (45%), Gaps = 25/364 (6%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           +S + L+   C    VD     L ++   G      T T LL   C  G+ D+ + ++++
Sbjct: 98  HSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDD 157

Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           ++  G   + + +++++ + SK G+ ++A   +++M+      N   +  LI G+  + +
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D+A  +FD M   G   +   Y  ++ G CK +++E A+QL  E    G+ PD    + 
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 246 LITSCSDEGELTLLVKEIW-----EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +I+     G   L  ++++          N MT     ++  L  +G++++A+ L Q M 
Sbjct: 278 IISGLCRAGR-PLAAQQLFRYICAHGHTPNIMTY--GVLLDGLCKHGNLEEAFALFQEMQ 334

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                           + TV PN   + I+I++L K GK+     LF  +   G   NV+
Sbjct: 335 ----------------RSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVY 378

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y  L+  LC    + E+++L R+MEE G  P     N + +   + +D   A  LV +M
Sbjct: 379 TYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438

Query: 421 RVQG 424
             +G
Sbjct: 439 VNRG 442



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 51/348 (14%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +++  ML+D +   GL  PN Y+YN ++ +L KS   +     LK+M+  G   +   
Sbjct: 146 GKMDQVMMLYDDMLVRGL-QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVN 204

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + L+  YC  GQ D+A SVF+ ++  G   + + ++ L+  + K   +++A +L++   
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  +  TF  +I G  +  R   A QLF  +   G   +   Y V++ GLCK+  LE
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  L+ EM+ S + P+  I + LI S                         LC      
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDS-------------------------LCKC---- 355

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G I     L   +I      D G++          PN  ++  ++  L K+G +  
Sbjct: 356 ----GKIKDGKELFSRLI------DEGLK----------PNVYTYTALVGALCKEGLIIE 395

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           A  LFR+M + GC  +   YN +I G         + +L+ EM   GF
Sbjct: 396 AHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +EEA  L D+  R+GL VP+  ++  ++  LC++      +   + +  +G   +  T  
Sbjct: 253 IEEAVQLLDETLRKGL-VPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYG 311

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEH--VFSILLVAFSKWGEVDKACELIERMDD 163
            LL   C  G  ++A ++F E+     V  +  +++IL+ +  K G++    EL  R+ D
Sbjct: 312 VLLDGLCKHGNLEEAFALFQEM-QRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLID 370

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             ++ N  T+  L+    K+  + +A +LF KM + G   D   Y+VII G  ++K   M
Sbjct: 371 EGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSM 430

Query: 224 ALQLYSEMKGSGITPD 239
           A QL  EM   G + D
Sbjct: 431 ARQLVEEMVNRGFSAD 446



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 2/159 (1%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  LF  +   G   PN  +Y  LL+ LCK  +++      +EMQ      +    T L+
Sbjct: 291 AQQLFRYICAHGH-TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILI 349

Query: 109 QVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
              C  G+      +F+ +ID G   + + ++ L+ A  K G + +A +L  +M++    
Sbjct: 350 DSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCT 409

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
            ++  + V+I GF++      A QL ++M   GF++DAA
Sbjct: 410 PDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAA 448



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F  M+ +  +P +  ++ L +   + G+  + ++ LS+ +E      D+ + + LI+  C
Sbjct: 50  FRLMLLRKPLPCIVEFSKLFSSIVRMGHY-ETVVYLSKEIEFLGIEQDIHSLSILINCFC 108

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
              R D  + + +++ + G  P+ +TF  L+ GLC   +    ++ +  M  +G++P+++
Sbjct: 109 HLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVY 168

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  +I++         A   LK+M
Sbjct: 169 TYNVIINSLSKSGKANEALGFLKQM 193



 Score = 39.3 bits (90), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G +++   LF ++  EGL  PN Y+Y  L+ ALCK   +       ++M++ 
Sbjct: 348 LIDSLCKCGKIKDGKELFSRLIDEGL-KPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
           G   DK     ++Q +        A  +  E+++ G+  +     LL  F
Sbjct: 407 GCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDF 456


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 168/645 (26%), Positives = 273/645 (42%), Gaps = 86/645 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   GLV+E N L+ ++  E + + + Y++N ++   CK   V   +  + +M   
Sbjct: 163 LLTLLARFGLVDEMNQLYTEMLEEFVSM-DIYTFNLMINVYCKMGFVKEAKQFMCKMIQA 221

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D +T T  +  YC S   D A  VF E+ +   V    ++ L+    + G +D+A 
Sbjct: 222 GLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVS---YNQLIHGLCEAGRIDEAV 278

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L  RM D     N  T+  LI G  +K+ V KA+ L D+M +     D   Y+ +I G 
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQ 337

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTLLVKEIWEDRDVNTMT 273
           C+   L+ A +L S MK  G+ PD       I     S+  E    + +   +  V+   
Sbjct: 338 CRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANV 397

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           ++ + ++      G +D+A  L + M+                    SPN  +F+ +I+ 
Sbjct: 398 IMYSVLIDGYCKVGKVDEAGCLFEKML----------------SKNCSPNAYTFNALIHG 441

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   G L  ALSLF +M ++G    V+ +N LI  +      +++++ L++M  SG KP 
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N+     C    V  A +++ +M+ +G  P     T LIK   K G    AF  L 
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRV-----------------------------DLAL 484
            M      P    + + I  L D + V                             D+ +
Sbjct: 562 SMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           ELF ++  HGC PD   Y  +ISG+CK + +  A  L ++M  +G+ PS   +N +I+  
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681

Query: 545 CK------SGNIDQAMLC----------------LSRMLEKESGSP------------DV 570
           CK      + NI + M+C                L    E E G+             D 
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           I +  LIDG+   G  ++   L+ EME+ GC  +  T+  L   L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 213/481 (44%), Gaps = 55/481 (11%)

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           +L+ K +  L+    +   VD+  QL+ +M +   + D   ++++I   CK   ++ A Q
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
              +M  +G++PD+   +  I                            C S        
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILG-------------------------YCRS-------- 240

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
             +D A+ + + M                     + N  S++ +I+ L + G++D A+SL
Sbjct: 241 KDVDSAFRVFEEM--------------------PNRNEVSYNQLIHGLCEAGRIDEAVSL 280

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M    C  NV+ Y  LI GLC  N + ++  LL EM E    P   T NS+    CR
Sbjct: 281 FVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCR 339

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  L+  M+ +G  P  +     I  LCK  +  EA R    + +EG   +++ 
Sbjct: 340 AGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIM 399

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YS  I G   + +VD A  LF  + +  C P+   +N +I GLC A  + EA  LF++M+
Sbjct: 400 YSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV 459

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             GL P+V T+N+LI    K G+ D A  CL +M+      P   TY   I+  C AG+ 
Sbjct: 460 KMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM-SSGEKPVARTYNAFIEVYCSAGKV 518

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
            +A  +  +M+E+G  P+  T+ +LI    K     +A    + M +   +P    F++L
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSL 578

Query: 647 I 647
           I
Sbjct: 579 I 579



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 173/340 (50%), Gaps = 6/340 (1%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           ++ ++  L + G +D    L+ EM +     +++ +N +I+  C    ++E+ + + +M 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           ++G  P +FT  S     CR +DV  A  +  +M  +     V +N L I  LC+ G+  
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE---VSYNQL-IHGLCEAGRID 275

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA      M  +   P++  Y+A I GL   K V  A+ L  ++      PD++ YN +I
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           +G C+A  +  A  L + M  +GL+P   TY   I+  CKS  +++A      + E E  
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTE-EGV 393

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           S +VI Y+ LIDG C  G+ D+A  L+ +M  K C+PN  TF ALI GLC     + AL 
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F  M + G+KP ++ F  LI   L + +   A + L++M
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 194/419 (46%), Gaps = 26/419 (6%)

Query: 268 DVNTMTLLC-NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI----------- 315
           D+  ++L C N ++ +L   G +D+   L   M++     D+    LMI           
Sbjct: 151 DITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKE 210

Query: 316 --------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +  +SP+  +    I    +   +D A  +F EM      +N   YN LI 
Sbjct: 211 AKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQLIH 266

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC + R++E+  L   M++    P  +T  ++ + LCR+ +V  A+ L+ +M  +   P
Sbjct: 267 GLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVP 325

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            +     LI   C+ G    A+R L+ M + G +PD   Y   I  L    RV+ A  LF
Sbjct: 326 DLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLF 385

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G   +V+ Y+++I G CK  +V EA  LF +M++K   P+  T+N LI+G C +
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           GN+ +A+    +M+ K    P V T+  LI  +   G  DDA     +M   G  P   T
Sbjct: 446 GNLKEALSLFDQMV-KMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + A I   C   + + A      MKE+G+ PD F + +LI A+        AF+VLK M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 241/610 (39%), Gaps = 120/610 (19%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           YN LL  L +   VD +     EM +     D YT   ++ VYC  G   +A     ++I
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 129 DHGWVDEHVFSI-LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             G   ++  S   ++ + +  +VD A  + E M +     NE ++  LIHG  +  R+D
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQLIHGLCEAGRID 275

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A+ LF +M       +   Y  +I GLC+ K +  A+ L  EM    + PD      LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPD------LI 328

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
           T                            NS++      G +D AY LL           
Sbjct: 329 TY---------------------------NSLIAGQCRAGHLDSAYRLLS---------- 351

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                LM  +G V P+  ++   I+ L K  +++ A  LF  +T+ G   NV +Y+ LID
Sbjct: 352 -----LMKERGLV-PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLID 405

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C   +++E+  L  +M      P  +T N+                            
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA---------------------------- 437

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                  LI  LC  G   EA      MV+ G  P +  ++  IG ++     D A +  
Sbjct: 438 -------LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCL 490

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
           + + + G  P    YN  I   C A +V EAED+  +M  +G+ P   TY  LI  + K 
Sbjct: 491 QKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKL 550

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC----------------------IAGR 585
           G    A   L  M + +   P   T+ +LI  L                       + G 
Sbjct: 551 GLTYSAFDVLKSMFDADC-EPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGS 609

Query: 586 P-------DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
                   D  I L+ EME+ GC P+   +  LI+G+CK +    AL     M+++G+ P
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669

Query: 639 DMFVFVALIS 648
              VF A+IS
Sbjct: 670 SEMVFNAVIS 679



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 188/477 (39%), Gaps = 57/477 (11%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G  I  L     VEEA  LFD +  EG+   N   Y+ L++  CK   VD      ++M 
Sbjct: 366 GCFIDFLCKSNRVEEARRLFDSLTEEGVSA-NVIMYSVLIDGYCKVGKVDEAGCLFEKML 424

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVD 152
                 + YT   L+   C++G   +ALS+F++++  G     + F+IL+    K G+ D
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFD 484

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
            A + +++M     +   +T+   I  +    +V +A  +  +M + G   D   Y  +I
Sbjct: 485 DAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM 272
               K      A  +   M  +   P       LI             K++++ R V   
Sbjct: 545 KAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLI-------------KQLFDKRYV--- 588

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                                         E   + GVE +  F           D+  +
Sbjct: 589 -----------------------------VEKSGETGVESVSNFG----------DVPGS 609

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            + K  + D+ + LF EM + GC  +   Y  LI G+C    L  + +LL +M++ G  P
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
           +    N++  C C+ Q    A N+V  M   GH P ++H   LI  L + G+        
Sbjct: 670 SEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVF 729

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +   G+  D + +   I G++    V+   +LF ++  +GC      Y+I+   L
Sbjct: 730 KKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 11/204 (5%)

Query: 451 FLTDMVQEGFLPDIV-----CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           F++D+ ++    DI      CY+  +  L     VD   +L+ ++       D+  +N++
Sbjct: 139 FVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLM 198

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I+  CK   V EA+    +MI  GL P   T    I G+C+S ++D A      M  +  
Sbjct: 199 INVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE 258

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
                ++Y  LI GLC AGR D+A+ L+  M++  C PN  T+ ALI GLC+ +  +A  
Sbjct: 259 -----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMG 313

Query: 626 VHFRMMKEKGMKPDMFVFVALISA 649
           +   M+ E+ + PD+  + +LI+ 
Sbjct: 314 LLDEML-ERNLVPDLITYNSLIAG 336


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 151/619 (24%), Positives = 263/619 (42%), Gaps = 58/619 (9%)

Query: 68  SYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           +YN L+  LCK   V + +E+R K +++ G   D  T   L+  +C   QFD  + + NE
Sbjct: 255 TYNVLIHGLCKGGGVLEALEVR-KSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNE 313

Query: 127 IIDHGWVDEH------------------------------------VFSILLVAFSKWGE 150
           +++ G+V                                       V++ L+ A  K  +
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +DKA  L + M   N+ LN+ T+ +LI  F K+  +D A   F +M + G       Y+ 
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSD-EGELTLLVKEIWEDRD 268
           +I G CK   L  A  LY++M   G+ P     + LI+  C D + E    +     +++
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +        +++  L S   + +A  L   M++ +                + P   +++
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK----------------IKPTEVTYN 537

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I    K   +D A  L  +M   G + + + Y  LI GLC++ R+  + + + ++ + 
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
             K      +++    C +  +  AL+   +M  +G    +  + +LI    K       
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           F  L  M  +G  PD V Y++ I           + E    +    C P+VV Y   ++G
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK   +  A  LF +M+T  + P+  TY   ++   K GN+ +A      ML+      
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK--GLLA 775

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +  TY  LI G C  GR  +A  + +EM E G  P+ IT+  +I   C+     AA+  +
Sbjct: 776 NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELW 835

Query: 629 RMMKEKGMKPDMFVFVALI 647
             M  KG++PD   F  LI
Sbjct: 836 DTMLRKGVEPDSVAFNLLI 854



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 254/603 (42%), Gaps = 57/603 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           TL+ +L       +F     VF+E ++ G   D +  S ++ +  +  +  +A E I  M
Sbjct: 185 TLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWM 244

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           +     L+  T+ VLIHG  K   V +AL++   + + G   D   Y  ++ G C+ +Q 
Sbjct: 245 ESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQF 304

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLLCN 277
           +  + L +EM   G  P    +S L+     +G +     L+VK       +     L N
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVK-------LGRFGFLPN 357

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
               + V N        L+ A+ KGE +    +    +    +  N  ++ I+I++  K 
Sbjct: 358 ----LFVYNA-------LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKR 406

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G LD+A S F  M + G  + ++ YN+LI+G C    L  +  L  +M   G +PT  T 
Sbjct: 407 GMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTF 466

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            ++    C+   V  A  L R+M  +   P V   T LI  LC   +  EA +   +MV+
Sbjct: 467 TTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVE 526

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
               P  V Y+  I G      +D A EL  D+  +G  PD   Y  +ISGLC   RV+ 
Sbjct: 527 RKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSA 586

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK-------------- 563
           A+D  +++  K L  +   Y+ L++G+C  G + +A+     M+++              
Sbjct: 587 AKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLID 646

Query: 564 --------------------ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
                               +   PD + YT++ID     G    +    + M  + C P
Sbjct: 647 GAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFP 706

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N +T+ A + GLCK      A   F  M    + P+   +   + +   E N   A ++ 
Sbjct: 707 NVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLH 766

Query: 664 KEM 666
            EM
Sbjct: 767 HEM 769



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 144/612 (23%), Positives = 256/612 (41%), Gaps = 60/612 (9%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +  A+  L+  L   G ++ A  L  ++ R G  +PN + YN L+ ALCK   +D  E+ 
Sbjct: 322 TEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF-LPNLFVYNALINALCKGEDLDKAELL 380

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG----------WVDEH-- 136
            K M       +  T + L+  +C  G  D A S F  +I+ G           ++ H  
Sbjct: 381 YKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCK 440

Query: 137 ------------------------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
                                    F+ L+  + K  +V+KA +L   M++  I  +  T
Sbjct: 441 FGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYT 500

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  LI+G    + + +A +LFD+M +         Y+V+I G CK   ++ A +L  +M 
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDML 560

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            +G+ PD      LI+     G ++   K+  +D     + L  N +    + +G   Q 
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSA-AKDFIDDLHKKNLKL--NEMCYSALLHGYCGQG 617

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             L +A+     +   G+ M ++             ++I+  +K   +     L ++M  
Sbjct: 618 -RLTEALSASCEMIQRGINMDLVCHA----------VLIDGAMKQQDMKRLFGLLKKMYD 666

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +  +Y ++ID        ++S E L  M      P   T  +    LC+  ++  
Sbjct: 667 QGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDR 726

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A +L  KM      P        +  L K G   EA     +M++ G L +   Y+  I 
Sbjct: 727 AGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIR 785

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G   + R+  A ++  ++  +G  PD + Y+ II   C++  V  A +L++ M+ KG+ P
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEK--------ESGSPDVITYTTLIDGLCIAG 584
               +NLLI G C +G +D+A    + ML +        +    D+     L+ G C+ G
Sbjct: 846 DSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTG 905

Query: 585 RPDDAIMLWNEM 596
             D A+ L++ M
Sbjct: 906 EVDTALRLYHSM 917



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 224/503 (44%), Gaps = 57/503 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VE+A  L+ ++  + +  P+ Y++  L+  LC +  +        EM +      + T  
Sbjct: 479 VEKAFKLYREMNEKEI-APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            +++ YC +   DKA  +  +++ +G V D + +  L+      G V  A + I+ +   
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           N++LNE  +  L+HG+  + R+ +AL    +M + G   D   + V+I G  K + ++  
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGE-------LTLLVKEIWEDRDVNTMTLLCN 277
             L  +M   G+ PD  I + +I + S EG        L L+V E     +V T T   N
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFP-NVVTYTAFMN 716

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            + ++    G ID+A +L + M+                   +SPN+ ++   +++L K+
Sbjct: 717 GLCKV----GEIDRAGHLFEKMLTA----------------NISPNSVTYGCFLDSLTKE 756

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +  A  L  EM + G + N   YN LI G C   RL E+ ++L EM E+G  P   T 
Sbjct: 757 GNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITY 815

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +++    CR  DV  A+ L   M  +G EP      LLI   C +G   +AF    DM+ 
Sbjct: 816 STIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLS 875

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  P  +         + +++ DL           G C      N ++ G C    V  
Sbjct: 876 RGLKPRQI---------LQLQKRDL-----------GVC------NFLMHGGCVTGEVDT 909

Query: 518 AEDLFNEMITKGLIPSVATYNLL 540
           A  L++ M+T+ +  S+  +  L
Sbjct: 910 ALRLYHSMLTRAVKLSLEMWKCL 932



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 173/372 (46%), Gaps = 1/372 (0%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L+ + ++   + D  V + ++   T+ P   +   I+N LL+  K  L   +F E    G
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
              + +  + +I  LC       + E +  ME + F  +  T N +   LC+   V+ AL
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEAL 273

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            + + +R +G +  V     L+   C+  +  +    + +MV+ GF+P     S  + GL
Sbjct: 274 EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGL 333

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                +D A +L   +   G  P++  YN +I+ LCK + + +AE L+  M +  L  + 
Sbjct: 334 RKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLND 393

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY++LI+ +CK G +D A     RM+E +     +  Y +LI+G C  G    A  L+ 
Sbjct: 394 VTYSILIDSFCKRGMLDVAESYFGRMIE-DGIRETIYPYNSLINGHCKFGDLSAAEFLYT 452

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           +M  +G  P   TF  LI+G CK  +   A   +R M EK + P ++ F ALI    S  
Sbjct: 453 KMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTN 512

Query: 655 NPPLAFEVLKEM 666
               A ++  EM
Sbjct: 513 EMAEASKLFDEM 524



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 180/401 (44%), Gaps = 2/401 (0%)

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTS 325
           +++N  T     ++  LV N     A +LL  ++ +G     V  + L   K     +T 
Sbjct: 90  KNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTL 149

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            FD ++++ L++ ++  A+ + R M     +  V   + +++GL    +    +E+  E 
Sbjct: 150 GFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDES 209

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             +G KP  +T +++ R LC  +D   A   +  M     +  +    +LI  LCK G  
Sbjct: 210 VNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGV 269

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           +EA      + ++G   D+V Y   + G   +++ D  + L  ++   G  P   A + +
Sbjct: 270 LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGL 329

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           + GL K   +  A DL  ++   G +P++  YN LIN  CK  ++D+A L    M     
Sbjct: 330 VDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNL 389

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              DV TY+ LID  C  G  D A   +  M E G       + +LI G CK     AA 
Sbjct: 390 PLNDV-TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +  M  +G++P    F  LIS +  +L    AF++ +EM
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 211/481 (43%), Gaps = 51/481 (10%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           + KA ++ + M +SG   DAA Y  ++  LCK   +  A+QL  +M+ +G          
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYP-------- 52

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                                    T T+  NS++R L  +G+++Q+  LL  ++     
Sbjct: 53  -------------------------TNTVTYNSLVRGLCMHGNLNQSLQLLDKLM----- 82

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                     +KG V PN  ++  ++    K+  ++ A+ L  E+   G   N+  YN L
Sbjct: 83  ----------WKGLV-PNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVL 131

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           + GLC   R EE+    R++   GF P   + N + R LC       A  L+ +M  +  
Sbjct: 132 LTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEER 191

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +    +LI  L  HG+   AF  L +MV+  F P    Y+  I  L    ++DL ++
Sbjct: 192 SPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIK 251

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
               +  H C P+   +N I + LCK  RV EA  +   +  K    +   Y  +I   C
Sbjct: 252 CLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLC 310

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           + GN   A   L  M  K    PD  TY++LI GLCI G  D+A+ ++  +EE    P  
Sbjct: 311 RKGNTYPAFQLLYEMT-KFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPIL 369

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             F ALI G CK  R   +L    MM EKG  P+   +  ++     E    LA EVLKE
Sbjct: 370 DNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKE 429

Query: 666 M 666
           +
Sbjct: 430 L 430



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 202/453 (44%), Gaps = 28/453 (6%)

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA  V   +I+ G + D   ++ L+    K G +  A +L+E+M++     N  T+  L+
Sbjct: 3   KATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLV 62

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G      ++++LQL DK+   G   +   Y  ++    K + +  A++L  E+   G  
Sbjct: 63  RGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ 122

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           P+    + L+T    EG     ++   +   +  N   +  N I+R L   G  ++A  L
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQL 182

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M   E                 SP+  +++I+I +L   G+++ A  +  EM +   
Sbjct: 183 LAEMDSEER----------------SPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASF 226

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL- 414
             +   YN +I  LC   +L+   + L +M      P   T N++   LC++  V  A  
Sbjct: 227 KPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPEAFS 285

Query: 415 ---NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
              NL  K R   H+ +      +I  LC+ G    AF+ L +M + GF+PD   YS+ I
Sbjct: 286 IIQNLGNKQRSSTHDFYKG----VITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLI 341

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL     +D ALE+FR +  +   P +  +N +I G CK+ R   + D+   M+ KG  
Sbjct: 342 RGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYT 401

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           P+  TY +++ G       + A   L  +L ++
Sbjct: 402 PNETTYTIIVEGIAHEEEKELAAEVLKELLLRQ 434



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 211/477 (44%), Gaps = 57/477 (11%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E   +P+  SY  L+  LCK  ++      +++M++ G+  +  T   L++  C  G  +
Sbjct: 13  ESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLN 72

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           ++L + ++++  G V +E  +S LL A  K   V++A +L++ +     + N  ++ VL+
Sbjct: 73  QSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLL 132

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K+ R ++A++ F  +   GF  +   Y++I+  LC   + E A QL +EM     +
Sbjct: 133 TGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERS 192

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P     + LI S                                 L  +G I+ A+ +L 
Sbjct: 193 PSLVTYNILIGS---------------------------------LAFHGRIEHAFEVLD 219

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+                + +  P+ ++++ II  L K+GKLDL +    +M    C  
Sbjct: 220 EMV----------------RASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNP 263

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   + N I  LC   R+ E++ +++ +       TH     +   LCR+ +   A  L+
Sbjct: 264 NEGTF-NAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLL 322

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHG---KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +M   G  P     + LI+ LC  G   +A+E FR L    +  + P +  ++A I G 
Sbjct: 323 YEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLE---ENDYRPILDNFNALILGF 379

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
               R DL+L++   +   G  P+   Y II+ G+   +    A ++  E++ + ++
Sbjct: 380 CKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQVM 436



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 180/403 (44%), Gaps = 52/403 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L   G + ++  L D++  +GL VPN ++Y+ LLEA  K   V+     L E+   
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGL-VPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAK 119

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           GW  +  +   LL   C  G+ ++A+  F ++   G+    V ++I+L +    G  ++A
Sbjct: 120 GWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEA 179

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  MD      +  T+ +LI       R++ A ++ D+M ++ F   A  Y+ II  
Sbjct: 180 NQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAH 239

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LCK  +L++ ++   +M      P             +EG               N + +
Sbjct: 240 LCKEGKLDLVIKCLDQMIHHRCNP-------------NEGTF-------------NAIAV 273

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           LC          G + +A++++Q +   +                 S     +  +I +L
Sbjct: 274 LC--------KQGRVPEAFSIIQNLGNKQR----------------SSTHDFYKGVITSL 309

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G    A  L  EMT+ G + + + Y++LI GLC    L+E+ E+ R +EE+ ++P  
Sbjct: 310 CRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPIL 369

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
              N++    C+      +L+++  M  +G+ P     T++++
Sbjct: 370 DNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVE 412


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 54/449 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +++       +  +AL+L  +M +     +A  Y+ +I G C   +++ AL +  EM
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 232 K-GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   GI P+      +I+               W           C          G +D
Sbjct: 172 RERGGIAPNQYTYGTVISG--------------W-----------CKV--------GRVD 198

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +   M+                KG V P    ++ +I      GKLD AL     M
Sbjct: 199 EAVKVFDEMLT---------------KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 243

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G    V  YN L+  L    R  E+YEL+ EM   G  P  FT N +    C+  +V
Sbjct: 244 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 303

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL +   M  +G    V   T LI  L K G+  E  +   + V+ G  PD+V Y+A 
Sbjct: 304 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 363

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +D A E+  ++      PD V YN ++ GLC   RV EA  L +EM  +G+
Sbjct: 364 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 423

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYN LI+G+   G++  A+   + M+ K   +P ++TY  LI GLC  G+ DDA 
Sbjct: 424 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAE 482

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +  EM E G  P+  T+++LI GL   D
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGLTTED 511



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 205/446 (45%), Gaps = 27/446 (6%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           +L+LYS MK   +      L  L+++        L          + T T   N ++R L
Sbjct: 67  SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTF--NIMLRHL 124

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
            S G   +A  LL+ M +                    PN  +++ +I      G++  A
Sbjct: 125 CSAGKPARALELLRQMPR--------------------PNAVTYNTVIAGFCSRGRVQAA 164

Query: 344 LSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMF 401
           L + REM + G +  N + Y  +I G C   R++E+ ++  EM   G  KP     N++ 
Sbjct: 165 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C +  +  AL    +M  +G    V    LL+  L   G+  EA+  + +M  +G  
Sbjct: 225 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 284

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y+  I G      V  ALE+F ++   G    VV Y  +I  L K  +V E + L
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+E + +G+ P +  YN LIN    SGNID+A   +  M EK+  +PD +TY TL+ GLC
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLC 403

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHFRMMKEKGMKPDM 640
           + GR D+A  L +EM E+G  P+ +T+  LI+G   K D   A  +   MM  KG  P +
Sbjct: 404 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN-KGFNPTL 462

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             + ALI           A  ++KEM
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEM 488



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           AP   L  D+ + R  +       ++R L S G    A  L  Q+ R     PN  +YN 
Sbjct: 96  APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNT 150

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           ++   C    V      ++EM++ G    ++YT   ++  +C  G+ D+A+ VF+E++  
Sbjct: 151 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 210

Query: 131 GWVDEH--VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           G V     +++ L+  +   G++D A    +RM +  + +   T+ +L+H      R  +
Sbjct: 211 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 270

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M   G A D   Y+++I G CK   ++ AL+++  M   G+       + LI 
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S +G++    K   E   R +    +L N+++    ++G+ID+A+ ++  M K     
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR--- 387

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+  +++ ++  L   G++D A  L  EMT+ G   ++  YN LI
Sbjct: 388 -------------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      ++++  +  EM   GF PT  T N++ + LC+      A N+V++M   G  
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494

Query: 427 P 427
           P
Sbjct: 495 P 495



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 178/410 (43%), Gaps = 58/410 (14%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPG--ALGFLIRCLGSVGLVEEANMLFDQVKR 58
           +A   SR R  A L ++ +  ++ R  ++P     G +I     VG V+EA  +FD++  
Sbjct: 152 IAGFCSRGRVQAALDIMRE--MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 209

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   P    YN L+                                     YC+ G+ D
Sbjct: 210 KGEVKPEAVMYNALIGG-----------------------------------YCDQGKLD 234

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            AL   + +++ G  +    +++L+ A    G   +A EL+E M    +  +  T+ +LI
Sbjct: 235 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +G  K+  V KAL++F+ M++ G  +    Y  +I  L K  Q++   +L+ E    GI 
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 354

Query: 238 PDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           PD  + + LI S S  G +     +    E + +    +  N++MR L   G +D+A  L
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  M +               +G + P+  +++ +I+     G +  AL +  EM   G 
Sbjct: 415 IDEMTE---------------RG-IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
              +  YN LI GLC + + +++  +++EM E+G  P   T  S+   L 
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  +F+ + R G+      +Y  L+ AL K   V   +    E    G   D   
Sbjct: 301 GNVKKALEIFENMSRRGVRA-TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +  SG  D+A  +  E+       D+  ++ L+      G VD+A +LI+ M 
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 419

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  I+ +  T+  LI G+  K  V  AL++ ++M   GF      Y+ +I GLCKN Q +
Sbjct: 420 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 479

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A  +  EM  +GITPD      LI   + E E
Sbjct: 480 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 224/487 (45%), Gaps = 26/487 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V   ++ +FS+ G + +A E++  M +  +  N +T   +I    +   V+ A  LF++M
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   D+  Y V++   CK   +  A +  S M   G   D    + +I+  S +G  
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256

Query: 257 TLLVKEIWEDRDVNTMTLLCNSI-----MRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           T   + +W  R +  M L  N I     +  L   GSI QA+ +L+ M+           
Sbjct: 257 T---RALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVG---------- 303

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLC 370
                KG   PN  +   +I+ L K G  + A  LF ++ +    + NV  Y  +I G C
Sbjct: 304 -----KGW-KPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 357

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
             ++L  +  LL  M+E G  P   T  ++    C+  +   A +L+  M  +G  P + 
Sbjct: 358 REDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               ++  LCK G+  EA++ L D  Q G  PD   Y+  +      + +  AL LF  +
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PD+ +Y  +I+  C+  R+ E+E  F E +  G+IP+  TY  +I G+C+ GN+
Sbjct: 478 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 537

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             AM    R L     +PD ITY  +I GLC   + D+A  L++ M EKG  P  +T + 
Sbjct: 538 TLAMKFFHR-LSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRIT 596

Query: 611 LITGLCK 617
           L    CK
Sbjct: 597 LAYEYCK 603



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 58/516 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++     VG ++EA  +  ++  +GL VPN  + N +++   +   V+  E+  +EM   
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGL-VPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199

Query: 96  GWGYDKYTLTPLLQVYCNSGQF---DKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEV 151
           G   D  +   ++ +YC  G     DK LSV   +++ G+V D   F++++  FS  G  
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSV---MLERGFVVDNATFTLIISRFSGKGYT 256

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A     R+ D  +  N   F  +I G  K+  + +A ++ ++M   G+  +   +  +
Sbjct: 257 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316

Query: 212 IGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           I GLCK    E A +L+ ++ +     P+    + +I+    E +L              
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKL-------------- 362

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
                              ++A  LL  M +               +G V PNT+++  +
Sbjct: 363 -------------------NRAEMLLSRMKE---------------QGLV-PNTNTYTTL 387

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+   K G  + A  L   M+  G   N+  YN +++GLC   R++E+Y++L +  ++G 
Sbjct: 388 IDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGL 447

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           KP  FT N +    C+++++  AL L  KM   G +P +   T LI   C+  +  E+  
Sbjct: 448 KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEM 507

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
           F  + V+ G +P    Y++ I G      + LA++ F  +  HGC PD + Y  IISGLC
Sbjct: 508 FFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLC 567

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           K  +  EA  L++ MI KGL+P   T   L   +CK
Sbjct: 568 KQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 206/433 (47%), Gaps = 20/433 (4%)

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCN 277
           +L+ A+++  EM   G+ P+   L+ +I   S+ G  E   L+ E    R V   ++   
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYR 209

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++ +    G+I +A   L  M++               +G V  N ++F +II+     
Sbjct: 210 VMVVMYCKIGNILEADKWLSVMLE---------------RGFVVDN-ATFTLIISRFSGK 253

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G    AL  FR +  +G   N+  +  +I+GLC    +++++E+L EM   G+KP  +T 
Sbjct: 254 GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313

Query: 398 NSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            S+   LC++     A  L  K+ R + H+P V   T +I   C+  K   A   L+ M 
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           ++G +P+   Y+  I G       + A +L   + + G  P++  YN I++GLCK  RV 
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA  +  +    GL P   TYN+L++  CK  NI QA+   ++ML K    PD+ +YTTL
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKML-KIGIQPDIHSYTTL 492

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I   C   R  ++ M + E    G  P   T+ ++I G C+      A+  F  + + G 
Sbjct: 493 IAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGC 552

Query: 637 KPDMFVFVALISA 649
            PD   + A+IS 
Sbjct: 553 APDSITYGAIISG 565



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 239/499 (47%), Gaps = 32/499 (6%)

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDA-------AMYDVIIGGLCKNKQLEMALQLYSE 230
           HGF   SR   ++  F + +   ++S          M   +   +C++      +++ S+
Sbjct: 10  HGF---SRRFTSIFTFKRKSLCYYSSSTQLQPISQTMVQRVCSLVCESYNQHAHMRVSSQ 66

Query: 231 MKGSGITPDF----EILSKLITSCSDEGELTLLVKEIW-----EDRDVNTMTLLCNSIMR 281
               GI  DF    + +S + +  SD G +  L    W     + R    + ++C     
Sbjct: 67  RLHFGIEVDFLTHEQAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVC---AM 123

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVG-----VEMLM-IFKGTVSPNTSSFDIIINTLL 335
            L+ N + ++A  +++ M+  E  ++VG     VEM++ +    + PNT + + II    
Sbjct: 124 SLIGNRNSEKACEVMRCMV--ESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTS 181

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G ++ A  LF EM   G   +   Y  ++   C    + E+ + L  M E GF   + 
Sbjct: 182 EMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNA 241

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T   +      +     AL   R++   G EP + + T +I+ LCK G   +AF  L +M
Sbjct: 242 TFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM 301

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQR 514
           V +G+ P++  +++ I GL      + A  LF + + +    P+V+ Y  +ISG C+  +
Sbjct: 302 VGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDK 361

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  AE L + M  +GL+P+  TY  LI+G CK+GN ++A   L  ++  E  SP++ TY 
Sbjct: 362 LNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERA-YDLMNLMSSEGFSPNLCTYN 420

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +++GLC  GR  +A  +  +  + G  P++ T+  L++  CK +  R AL  F  M + 
Sbjct: 421 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 480

Query: 635 GMKPDMFVFVALISAFLSE 653
           G++PD+  +  LI+ F  E
Sbjct: 481 GIQPDIHSYTTLIAVFCRE 499



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 202/467 (43%), Gaps = 51/467 (10%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            L ++I+    +GLVE A +LF+++   G+  P++ SY  ++   CK  ++   +  L  
Sbjct: 172 TLNWIIKVTSEMGLVEYAELLFEEMCVRGV-QPDSISYRVMVVMYCKIGNILEADKWLSV 230

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
           M + G+  D  T T ++  +   G   +AL  F  ++D G     + F+ ++    K G 
Sbjct: 231 MLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGS 290

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYD 209
           + +A E++E M     + N  T   LI G  KK   +KA +LF K+ +S     +   Y 
Sbjct: 291 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 350

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I G C+  +L  A  L S MK  G+ P+    + LI      G           +R  
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNF---------ERAY 401

Query: 270 NTMTL---------LC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           + M L         LC  N+I+  L   G + +AY +L+                  F+ 
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDG----------------FQN 445

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + P+  +++I+++   K   +  AL+LF +M +IG   ++  Y  LI   C  NR++ES
Sbjct: 446 GLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKES 505

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
                E    G  PT+ T  SM    CR  ++  A+    ++   G  P       +I  
Sbjct: 506 EMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISG 565

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           LCK  K  EA      M+++G +P             ++ R+ LA E
Sbjct: 566 LCKQSKRDEARSLYDSMIEKGLVP------------CEVTRITLAYE 600



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 151/301 (50%)

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +++      RL+E+ E++ EM   G  P   TLN + +       V  A  L  +M V+G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            +P      +++   CK G  +EA ++L+ M++ GF+ D   ++  I           AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
             FR +   G  P+++ +  +I GLCK   + +A ++  EM+ KG  P+V T+  LI+G 
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           CK G  ++A     +++  E+  P+V+TYT +I G C   + + A ML + M+E+G  PN
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             T+  LI G CK      A     +M  +G  P++  + A+++          A+++L+
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 665 E 665
           +
Sbjct: 441 D 441


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 245/572 (42%), Gaps = 97/572 (16%)

Query: 121  LSVFNEIIDHGWVDE-----HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            LS F E+  HG   +      V  +L  A ++W   D  C + E M +  I  +  T+  
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDA-ARW---DDICAVHEEMLELGIEPSIVTYNT 1124

Query: 176  LIHGFVKKSRVDKALQLFDKMTK--SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
            L+  F+K+ R DK   L  +M    SG   +   Y+V+I GL +   LE A +L   M+ 
Sbjct: 1125 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR- 1183

Query: 234  SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
                     LSK  +S                           N ++  L++ G + + Y
Sbjct: 1184 ---------LSKKASS------------------------FTYNPLITGLLARGCVKKVY 1210

Query: 294  NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +L Q  ++ E I                P   +++ +I+ LL+ G ++ A   F EM  +
Sbjct: 1211 DL-QLEMENEGIM---------------PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 1254

Query: 354  GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            G + +V  YN+L++G C +  L+E+  L  ++  +G  PT  T N +    CR  D+  A
Sbjct: 1255 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 1314

Query: 414  LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
              L  +M  QG  P V   T+L+K          A  F  +M+ +G  PD   Y+  I  
Sbjct: 1315 RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICA 1374

Query: 474  LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL------------ 521
             + +  +  A EL   +   G   D V YNI+I GLCK   + +A++L            
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434

Query: 522  -----------------------FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
                                   FN MI+ GL+PS  T+ ++I+ +C+ GN+  A     
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494

Query: 559  RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            +MLE E   P+ ITY  LI  LC  GR   A   ++EM E+G   N+ T+  LI G CK 
Sbjct: 1495 KMLE-EGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 1553

Query: 619  DRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                 A+  +  M + G+ PD     AL+  F
Sbjct: 1554 GNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 213/484 (44%), Gaps = 28/484 (5%)

Query: 190  LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
            L  F +M   G A D    + ++  L    + +    ++ EM   GI P     + L+ S
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 250  CSDEG---ELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
               EG   ++ +L+KE+ E R    +   +  N ++  L   G +++A  L++ M     
Sbjct: 1129 FLKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM----- 1182

Query: 305  IADVGVEMLMIFKGTVSPNTSSF--DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                           +S   SSF  + +I  LL  G +     L  EM   G M  V  Y
Sbjct: 1183 --------------RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 1228

Query: 363  NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
            N +I GL  S  +E +     EM   G  P   T NS+    C+  ++  AL L   +R 
Sbjct: 1229 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288

Query: 423  QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
             G  P V    +LI   C+ G   EA     +M ++G LP++  Y+  + G ++++ + +
Sbjct: 1289 AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAM 1348

Query: 483  ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            A E F ++ + G  PD  AYN  I        +A A +L   ++ +G+     TYN+LI+
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408

Query: 543  GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            G CK+GN+  A     +M+      PD ITYT LI   C  G   +A  ++N M   G  
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSN-GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 1467

Query: 603  PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            P+ +TF  +I   C+     +A   FR M E+G++P+   +  LI A        LA   
Sbjct: 1468 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHH 1527

Query: 663  LKEM 666
              EM
Sbjct: 1528 FHEM 1531



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 236/553 (42%), Gaps = 56/553 (10%)

Query: 67   YSYNC-LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
            YS  C   +A   +CS  L     +EM  +G   D      +L+V  ++ ++D   +V  
Sbjct: 1050 YSKECKARDATLDTCST-LCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHE 1108

Query: 126  EIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD--CNIRLNEKTFCVLIHGFVK 182
            E+++ G     V ++ LL +F K G  DK   L++ M+        N+ T+ V+I G  +
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168

Query: 183  KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            K  +++A +L + M  S  AS +  Y+ +I GL     ++    L  EM+  GI P    
Sbjct: 1169 KGDLEEAAELVEGMRLSKKAS-SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227

Query: 243  LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
             + +I      G +     +  E R    M LL + I    + NG   +A NL +A++  
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMR---AMGLLPDVITYNSLLNGYC-KAGNLKEALLLF 1283

Query: 303  EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
              +   G+          +P   +++I+I+   + G L+ A  L  EM + GC+ NV  Y
Sbjct: 1284 GDLRRAGL----------APTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 1333

Query: 363  NNLIDGLCNSNRLEESYELLREMEESGFKPTHF--------------------------- 395
              L+ G  N   L  + E   EM   G +P  F                           
Sbjct: 1334 TILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLML 1393

Query: 396  --------TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
                    T N +   LC+  ++  A  L  KM   G +P     T LI   C+ G   E
Sbjct: 1394 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 1453

Query: 448  AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
            A +   +M+ +G LP  V ++  I        +  A   FR +   G  P+ + YN++I 
Sbjct: 1454 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 508  GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
             LC+  R   A   F+EM+ +GL+ +  TY LLI+G CK GN + AM     M  +    
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM-HQNGIH 1572

Query: 568  PDVITYTTLIDGL 580
            PD +T+  L+ G 
Sbjct: 1573 PDYLTHKALLKGF 1585



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 204/486 (41%), Gaps = 22/486 (4%)

Query: 64   PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG--YDKYTLTPLLQVYCNSGQFDKAL 121
            P+  +YN LL++  K    D V M LKEM+  G G   +  T   ++      G  ++A 
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 122  SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             +   +          ++ L+      G V K  +L   M++  I     T+  +IHG +
Sbjct: 1177 ELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 1236

Query: 182  KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
            +   V+ A   F +M   G   D   Y+ ++ G CK   L+ AL L+ +++ +G+ P   
Sbjct: 1237 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 1296

Query: 240  -FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             + IL        D  E  +L +E+ E         L N     ++  GS++     +++
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGE------QGCLPNVCTYTILMKGSLN-----VRS 1345

Query: 299  MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
            +       D      M+ KG + P+  +++  I   L  G +  A  L   +   G   +
Sbjct: 1346 LAMAREFFDE-----MLSKG-LQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSD 1399

Query: 359  VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
               YN LI GLC +  L+++ EL  +M  +G +P   T   +    C R  +  A  +  
Sbjct: 1400 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 1459

Query: 419  KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             M   G  P     T++I   C+ G    A+ +   M++EG  P+ + Y+  I  L  + 
Sbjct: 1460 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519

Query: 479  RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            R  LA   F ++   G   +   Y ++I G CK     +A   + EM   G+ P   T+ 
Sbjct: 1520 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK 1579

Query: 539  LLINGW 544
             L+ G+
Sbjct: 1580 ALLKGF 1585



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 210/477 (44%), Gaps = 35/477 (7%)

Query: 44   GLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSC----SVDLVE-MRLKEMQDYGW 97
            G  ++  ML  +++  G  C+PN+ +YN ++  L +      + +LVE MRL + +   +
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSF 1191

Query: 98   GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACEL 157
             Y+   +T LL   C    +D  L + NE I    V    ++ ++    + G V+ A   
Sbjct: 1192 TYNPL-ITGLLARGCVKKVYDLQLEMENEGIMPTVV---TYNAMIHGLLQSGLVEAAQVK 1247

Query: 158  IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
               M    +  +  T+  L++G+ K   + +AL LF  + ++G A     Y+++I G C+
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 218  NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL-LC 276
               LE A  L  EM   G  P+          C+     T+L+K       +N  +L + 
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNV---------CT----YTILMKG-----SLNVRSLAMA 1349

Query: 277  NSIMRILVSNGSIDQ--AYN--LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                  ++S G      AYN  +   +I G+      +  +++ +G +S +T +++I+I+
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG-ISSDTVTYNILIH 1408

Query: 333  TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
             L K G L  A  L  +M   G   +   Y  LI   C    L E+ ++   M   G  P
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468

Query: 393  THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
            +  T   +    CRR ++  A    RKM  +G EP      +LI  LC+ G+   A    
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 1528

Query: 453  TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +M++ G + +   Y+  I G   +   + A+  + ++  +G  PD + +  ++ G 
Sbjct: 1529 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 181/475 (38%), Gaps = 121/475 (25%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            LI  L + G V++   L  +++ EG+ +P   +YN ++  L +S  V+  +++  EM+  
Sbjct: 1196 LITGLLARGCVKKVYDLQLEMENEGI-MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAM 1254

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
            G   D  T   LL  YC +G   +AL +F ++   G     + ++IL+  + + G++++A
Sbjct: 1255 GLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA 1314

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF------------- 201
              L E M +     N  T+ +L+ G +    +  A + FD+M   G              
Sbjct: 1315 RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICA 1374

Query: 202  ----------------------ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                                  +SD   Y+++I GLCK   L+ A +L  +M  +G+ PD
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434

Query: 240  FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                + LI +  + G    L++E                I   ++S+G +          
Sbjct: 1435 CITYTCLIHAHCERG----LLRE-------------ARKIFNNMISDGLL---------- 1467

Query: 300  IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                                  P+  +F +II+   + G L  A   FR+M + G   N 
Sbjct: 1468 ----------------------PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 1505

Query: 360  FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              YN LI  LC   R + +     EM E G     +T                       
Sbjct: 1506 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY---------------------- 1543

Query: 420  MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
                         TLLI   CK G   +A RF  +M Q G  PD + + A + G 
Sbjct: 1544 -------------TLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 209/427 (48%), Gaps = 26/427 (6%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++  L +    E A  +Y  M   G +PD  +L  L++S +D G+    +   W D 
Sbjct: 140 YSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFN--IARTWVD- 196

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP-NTSS 326
            V    ++ N ++  LV    +D+A    +  +                 G   P ++ S
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQM-----------------GLHGPFDSCS 239

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM- 385
           F+I+I  L + GK+D A  LF EM   GC  +V  YN LI+G C  N ++  ++LL+E+ 
Sbjct: 240 FNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELL 299

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            ++   P   T  S+    C+   +  A  L   M   G +P      +LI    K G  
Sbjct: 300 SKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDM 359

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           + A     +M+  G  PDI+ +++ I G     +V+ +L+L+ ++ A    P+   + I+
Sbjct: 360 VSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAIL 419

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
            + LCK  R+ EA     ++  + ++     YN +I+G+CK+GN+D+A + L+ M EK  
Sbjct: 420 TNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRC 479

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD ITYT LI G C+ GR  +AI ++N M   GCAP+ IT  +LI+ L K   P  A 
Sbjct: 480 -KPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEA- 537

Query: 626 VHFRMMK 632
             +R+M+
Sbjct: 538 --YRIMQ 542



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 224/495 (45%), Gaps = 37/495 (7%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T CV  H       +D  L  F K      A +      ++ GL      E+AL+ +   
Sbjct: 83  TLCVRTHS------LDACLDYFSKTLTPSIAFE------VVRGL---NNPELALKFFQLS 127

Query: 232 KGS-GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           + +  +   F   S L+ S S+ G      K +++  +++  +    S++  LVS+ +  
Sbjct: 128 RVNLNLCHSFRTYSFLLRSLSEMG-FHESAKAVYDCMNIDGHSPDA-SVLGFLVSSATDA 185

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
             +N+ +  + G       VE  ++           ++ ++N L++  ++D A+  FRE 
Sbjct: 186 GKFNIARTWVDG-------VEFSLVV----------YNKLLNQLVRGNQVDEAVCFFREQ 228

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
             +    +   +N LI GLC   ++++++EL  EM   G  P   T N++    CR  +V
Sbjct: 229 MGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEV 288

Query: 411 VGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
               +L++++  +    P V   T +I   CK GK  +A     +M+  G  P+   ++ 
Sbjct: 289 DRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNI 348

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   +  +  A  ++ ++   GC PD++ +  +I G C+  +V  +  L++E+  + 
Sbjct: 349 LINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN 408

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P+  T+ +L N  CK   + +A   L R L+          Y  +IDG C AG  D+A
Sbjct: 409 LSPNEYTFAILTNALCKENRLHEARGFL-RDLKWRHIVAQPFMYNPVIDGFCKAGNVDEA 467

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            ++  EMEEK C P++IT+  LI G C   R   A+  F  M   G  PD     +LIS 
Sbjct: 468 NVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISC 527

Query: 650 FLSELNPPLAFEVLK 664
            L    P  A+ +++
Sbjct: 528 LLKAGMPNEAYRIMQ 542



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 42/347 (12%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+ S    ++++    GK ++A +        G   ++ +YN L++ L   N+++E+  
Sbjct: 169 SPDASVLGFLVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQVDEAVC 223

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
             RE                                  +M + G       N +LI+ LC
Sbjct: 224 FFRE----------------------------------QMGLHGPFDSCSFN-ILIRGLC 248

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDV 499
           + GK  +AF    +M   G  PD++ Y+  I G   +  VD   +L +++ + +   PDV
Sbjct: 249 RIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDV 308

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V Y  IISG CK  ++ +A  LFN MI+ G+ P+  T+N+LING+ K G++  A      
Sbjct: 309 VTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEE 368

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ML      PD+IT+T+LIDG C  G+ + ++ LW+E+  +  +PN  TF  L   LCK +
Sbjct: 369 MLLL-GCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKEN 427

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R   A    R +K + +    F++  +I  F    N   A  +L EM
Sbjct: 428 RLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEM 474



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 196/455 (43%), Gaps = 60/455 (13%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           T + LL+     G  + A +V++ + ID    D  V   L+ + +  G+ + A   ++ +
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGV 198

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           +   +  N+     L++  V+ ++VD+A+  F +        D+  ++++I GLC+  ++
Sbjct: 199 EFSLVVYNK-----LLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKV 253

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNS 278
           + A +L++EM+G G +PD    + LI       E+     L+KE+    D++   +   S
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I+      G +++A  L   MI                   + PN  +F+I+IN   K G
Sbjct: 314 IISGYCKLGKMEKASILFNNMISS----------------GIKPNAFTFNILINGFGKVG 357

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +  A +++ EM  +GC  ++  + +LIDG C + ++E S +L  E+      P  +T  
Sbjct: 358 DMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTF- 416

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
                                              +L   LCK  +  EA  FL D+   
Sbjct: 417 ----------------------------------AILTNALCKENRLHEARGFLRDLKWR 442

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             +     Y+  I G      VD A  +  ++    C PD + Y I+I G C   R++EA
Sbjct: 443 HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEA 502

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
             +FN M+  G  P   T   LI+   K+G  ++A
Sbjct: 503 ISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEA 537



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 176/428 (41%), Gaps = 59/428 (13%)

Query: 29  SPGA--LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP A  LGFL+      G    A    D V+   +       YN LL  L +   VD   
Sbjct: 169 SPDASVLGFLVSSATDAGKFNIARTWVDGVEFSLVV------YNKLLNQLVRGNQVDEAV 222

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAF 145
              +E       +D  +   L++  C  G+ DKA  +FNE+   G   D   ++ L+  F
Sbjct: 223 CFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGF 282

Query: 146 SKWGEVDKACELI-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            +  EVD+  +L+ E +   ++  +  T+  +I G+ K  +++KA  LF+ M  SG   +
Sbjct: 283 CRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPN 342

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
           A  ++++I G  K   +  A  +Y EM   G  PD    + LI      G++   +K +W
Sbjct: 343 AFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLK-LW 401

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            + +                       A NL                         SPN 
Sbjct: 402 HELN-----------------------ARNL-------------------------SPNE 413

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +F I+ N L K+ +L  A    R++     +   F+YN +IDG C +  ++E+  +L E
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAE 473

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           MEE   KP   T   +    C +  +  A+++  +M   G  P     T LI  L K G 
Sbjct: 474 MEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGM 533

Query: 445 AMEAFRFL 452
             EA+R +
Sbjct: 534 PNEAYRIM 541



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 156/349 (44%), Gaps = 27/349 (7%)

Query: 46  VEEANMLFDQVKREGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           V+EA   F +  + GL  P ++ S+N L+  LC+   VD       EM+ +G   D  T 
Sbjct: 218 VDEAVCFFRE--QMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITY 275

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMD 162
             L+  +C   + D+   +  E++    +   V  ++ ++  + K G+++KA  L   M 
Sbjct: 276 NTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMI 335

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I+ N  TF +LI+GF K   +  A  ++++M   G   D   +  +I G C+  ++E
Sbjct: 336 SSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVE 395

Query: 223 MALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEI-WEDRDVNTMTLLCNS 278
            +L+L+ E+    ++P+   F IL+  +   +   E    ++++ W  R +     + N 
Sbjct: 396 RSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKW--RHIVAQPFMYNP 453

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++      G++D+A  +L  M +                    P+  ++ I+I      G
Sbjct: 454 VIDGFCKAGNVDEANVILAEMEEKR----------------CKPDKITYTILIIGHCMKG 497

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           +L  A+S+F  M   GC  +     +LI  L  +    E+Y +++   E
Sbjct: 498 RLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 18/250 (7%)

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           R   +Q  E W+     +I  LC    +++A     D   +   P I     A   +  +
Sbjct: 66  RPEVIQNPENWI---VKVICTLCVRTHSLDA---CLDYFSKTLTPSI-----AFEVVRGL 114

Query: 478 KRVDLALELFR-DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +LAL+ F+        C     Y+ ++  L +      A+ +++ M   G  P  + 
Sbjct: 115 NNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASV 174

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
              L++    +G  + A   +      +     ++ Y  L++ L    + D+A+  + E 
Sbjct: 175 LGFLVSSATDAGKFNIARTWV------DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQ 228

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
                  +  +F  LI GLC+  +   A   F  M+  G  PD+  +  LI+ F      
Sbjct: 229 MGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEV 288

Query: 657 PLAFEVLKEM 666
               ++LKE+
Sbjct: 289 DRGHDLLKEL 298


>gi|297797201|ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312320|gb|EFH42744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 983

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 176/695 (25%), Positives = 308/695 (44%), Gaps = 79/695 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L  C    G   EA  LFD ++ +G  V +   Y CL+   CK  ++ +       M + 
Sbjct: 244 LFYCFCRRGCAAEAEALFDHMEVDGYFV-DKVMYTCLMREYCKDNNMTMAMRLYLRMVER 302

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDK 153
               D      L+  +   G  DK   +F+++I  G V  +VF+  +++ ++ K G VD 
Sbjct: 303 SCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRG-VQSNVFTYHVMIGSYCKEGNVDY 361

Query: 154 ACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           A  L E      +I  N   +  LI GF KK  +DKA+ L  +M  +G   D   Y V++
Sbjct: 362 ALRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 421

Query: 213 GGLCKNKQLEMALQLYSEM--KGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---R 267
             L K  +L+ A+ +   +   G GI P             D G + + V+ + E+   +
Sbjct: 422 KMLPKCHELKYAMVILQSILDNGCGIDPPV---------IDDLGNIEVKVESLLEEIARK 472

Query: 268 DVN--------TMTLLCN------SIMRI--LVSNG--SIDQAYN-LLQAMIKGEPIADV 308
           D N          T LC+      ++ RI  +V+ G   +  +YN +++ + +   I D+
Sbjct: 473 DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL 532

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           G  + +I +    P+  ++ I++N L K+   D A S+   M ++G    V +Y+++I  
Sbjct: 533 GSLVNLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIYSSIIGS 592

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           L    R+ E+ E   +M ESG +P       M     R   +  A  LV ++      P 
Sbjct: 593 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINAYARNGRIDEANELVEEVVKHFVRPS 652

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
               T+LI    K G   +  ++L  M+++G  P+ V Y++ IG  +       +  LF 
Sbjct: 653 SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFG 712

Query: 489 DICAHGCCPDVVAYNIIISGLCKA-------------------QRVAEAEDLFN------ 523
            +  +G   D +AY  ++SGL +A                   QR+ + + + +      
Sbjct: 713 LMGENGIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLLQTKPIVSISSSLC 772

Query: 524 ------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
                         + K +IP++  +N ++ G+C +G +D+A   L  M +KE   P+ +
Sbjct: 773 NYGSKSFAMEVIGKVKKSIIPNLYLHNTIVTGYCAAGRLDEAYNHLESM-QKEGIVPNQV 831

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TYT L+     AG  + AI L+   EE  C P+++    L+ GLC+ +RP  AL     M
Sbjct: 832 TYTILMKSHIEAGDIESAIDLF---EETKCEPDQVMCSTLLKGLCESERPLDALALMLEM 888

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ++KG+ P+   +  L+           AF+V+K+M
Sbjct: 889 QKKGIYPNKDSYEKLLQCLCYSRLTMEAFKVVKDM 923



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 152/670 (22%), Positives = 266/670 (39%), Gaps = 92/670 (13%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LIR L  +G    A   ++Q       VP++   + ++  L K    D     L  + 
Sbjct: 100 GALIRKLTEMGQPGLAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRII 159

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-----WVDEHVFSILLVAFSKW 148
             G+   + + + ++   CN  +F +A   F ++ + G     W  + +F          
Sbjct: 160 ASGYAPSRDSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK----GLCGH 215

Query: 149 GEVDKACELIERM-DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
           G +D+A  +++ + +   + L    +  L + F ++    +A  LFD M   G+  D  M
Sbjct: 216 GHLDEAIGMLDTLCEMTRMPLPVNLYKSLFYCFCRRGCAAEAEALFDHMEVDGYFVDKVM 275

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  ++   CK+  + MA++LY  M       D  I + LI                    
Sbjct: 276 YTCLMREYCKDNNMTMAMRLYLRMVERSCELDPCIFNTLI-------------------- 315

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                    +  M++    G +D+   +   MIK               +G V  N  ++
Sbjct: 316 ---------HGFMKL----GMLDKGRVMFSQMIK---------------RG-VQSNVFTY 346

Query: 328 DIIINTLLKDGKLDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            ++I +  K+G +D AL LF   T +    +NV  Y  LI G      ++++ +LL  M 
Sbjct: 347 HVMIGSYCKEGNVDYALRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRML 406

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG--HEP---------WVKHNTLL 435
           ++G  P H T   + + L +  ++  A+ +++ +   G   +P          VK  +LL
Sbjct: 407 DNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGIDPPVIDDLGNIEVKVESLL 466

Query: 436 ------------------IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
                                LC     + A   +  MV  G  P    Y++ I  L   
Sbjct: 467 EEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 526

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
             ++    L   I      PDV  Y I+++ LCK      A  + + M   GL P+VA Y
Sbjct: 527 NIIEDLGSLVNLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIY 586

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           + +I    K G + +A    ++MLE  SG  PD I Y  +I+     GR D+A  L  E+
Sbjct: 587 SSIIGSLGKQGRVVEAEETFAKMLE--SGIQPDEIAYMIMINAYARNGRIDEANELVEEV 644

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
            +    P+  T+  LI+G  K         +   M E G+ P+  ++ +LI  FL + + 
Sbjct: 645 VKHFVRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDF 704

Query: 657 PLAFEVLKEM 666
             +F +   M
Sbjct: 705 KFSFTLFGLM 714



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/529 (21%), Positives = 232/529 (43%), Gaps = 53/529 (10%)

Query: 2   ASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGL 61
            ++ S+   IA L  + + +V   C   P +   +I+CL    ++E+   L + ++    
Sbjct: 486 TALCSQRNYIAALSRI-EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLGSLVNLIQELDF 544

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            VP+  +Y  ++  LCK+   D     +  M++ G        + ++      G+  +A 
Sbjct: 545 -VPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 603

Query: 122 SVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
             F ++++ G   DE  + I++ A+++ G +D+A EL+E +    +R +  T+ VLI GF
Sbjct: 604 ETFAKMLESGIQPDEIAYMIMINAYARNGRIDEANELVEEVVKHFVRPSSFTYTVLISGF 663

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           VK   ++K  Q  DKM + G + +A +Y  +IG   K    + +  L+  M  +GI  D 
Sbjct: 664 VKMGMMEKGCQYLDKMLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDH 723

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
                L++              +W         +      +++V  G       LLQ ++
Sbjct: 724 IAYITLLSG-------------LWR-------AMARKKKRQVIVEPGK----EKLLQRLL 759

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           + +PI  +                       ++L   G    A+ +  ++ +   + N++
Sbjct: 760 QTKPIVSIS----------------------SSLCNYGSKSFAMEVIGKVKK-SIIPNLY 796

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           L+N ++ G C + RL+E+Y  L  M++ G  P   T   + +      D+  A++L  + 
Sbjct: 797 LHNTIVTGYCAAGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAIDLFEET 856

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           +    EP     + L+K LC+  + ++A   + +M ++G  P+   Y   +  L   +  
Sbjct: 857 KC---EPDQVMCSTLLKGLCESERPLDALALMLEMQKKGIYPNKDSYEKLLQCLCYSRLT 913

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
             A ++ +D+ A    P  + +  +I  LC+ +++ EA  LF  M+  G
Sbjct: 914 MEAFKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 962



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 172/400 (43%), Gaps = 25/400 (6%)

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           E++ ++I  CS   E    V +   +  +   +  C +++R L   G    A       +
Sbjct: 65  EVIRRVIDGCSSISEAAS-VADFAVNNGIELDSCCCGALIRKLTEMGQPGLAETFYNQRV 123

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
            G  I                P++S  D ++  L+K  + D A +    +   G   +  
Sbjct: 124 IGNGIV---------------PDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRD 168

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
             + ++D LCN +R  E++    +++E G     +    +F+ LC    +  A+ ++  +
Sbjct: 169 SSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLDEAIGMLDTL 228

Query: 421 RVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
                 P  V     L    C+ G A EA      M  +G+  D V Y+  +        
Sbjct: 229 CEMTRMPLPVNLYKSLFYCFCRRGCAAEAEALFDHMEVDGYFVDKVMYTCLMREYCKDNN 288

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           + +A+ L+  +    C  D   +N +I G  K   + +   +F++MI +G+  +V TY++
Sbjct: 289 MTMAMRLYLRMVERSCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGVQSNVFTYHV 348

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESG----SPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           +I  +CK GN+D A+    R+ E  +G    S +V  YTTLI G    G  D A+ L   
Sbjct: 349 MIGSYCKEGNVDYAL----RLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMR 404

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           M + G  P+ IT+  L+  L KC   + A+V  + + + G
Sbjct: 405 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 444



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 144/699 (20%), Positives = 272/699 (38%), Gaps = 119/699 (17%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V+  C + P     LI     +G++++  ++F Q+ + G+   N ++Y+ ++ + CK  
Sbjct: 299 MVERSCELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKRGV-QSNVFTYHVMIGSYCKEG 357

Query: 81  SVDLVEMRLKE-------------------------------------MQDYGWGYDKYT 103
           +VD   +RL E                                     M D G   D  T
Sbjct: 358 NVDYA-LRLFENNTGVEDISRNVHCYTTLISGFYKKGGMDKAVDLLMRMLDNGIVPDHIT 416

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV------------------------- 137
              LL++     +   A+ +   I+D+G  +D  V                         
Sbjct: 417 YFVLLKMLPKCHELKYAMVILQSILDNGCGIDPPVIDDLGNIEVKVESLLEEIARKDANL 476

Query: 138 ----FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
                +++  A         A   IE+M +        ++  +I    +++ ++    L 
Sbjct: 477 AAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLGSLV 536

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + + +  F  D   Y +++  LCKN   + A  +   M+  G+ P   I S +I S   +
Sbjct: 537 NLIQELDFVPDVDTYLIVVNELCKNNDRDAAFSVIDVMEELGLRPTVAIYSSIIGSLGKQ 596

Query: 254 GELT--------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           G +         +L   I  D ++  M ++ N+  R    NG ID+A  L++ ++K    
Sbjct: 597 GRVVEAEETFAKMLESGIQPD-EIAYMIMI-NAYAR----NGRIDEANELVEEVVKH--- 647

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                         V P++ ++ ++I+  +K G ++       +M + G   N  LY +L
Sbjct: 648 -------------FVRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNAVLYTSL 694

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFT----LNSMFRCLCR---RQDVVGALNLVR 418
           I         + S+ L   M E+G K  H      L+ ++R + R   RQ +V       
Sbjct: 695 IGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKL 754

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             R+   +P V  ++     LC +G    A   +   V++  +P++  ++  + G     
Sbjct: 755 LQRLLQTKPIVSISS----SLCNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIVTGYCAAG 809

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+D A      +   G  P+ V Y I++    +A  +  A DLF E   +   P     +
Sbjct: 810 RLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAIDLFEETKCE---PDQVMCS 866

Query: 539 LLINGWCKSGNIDQAMLCLSRMLE--KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            L+ G C+S   ++ +  L+ MLE  K+   P+  +Y  L+  LC +    +A  +  +M
Sbjct: 867 TLLKGLCES---ERPLDALALMLEMQKKGIYPNKDSYEKLLQCLCYSRLTMEAFKVVKDM 923

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
                 P  I    LI  LC+  + R A   F +M + G
Sbjct: 924 AALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 962



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/383 (18%), Positives = 156/383 (40%), Gaps = 23/383 (6%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           A   +I      G ++EAN L ++V +     P++++Y  L+    K   ++     L +
Sbjct: 620 AYMIMINAYARNGRIDEANELVEEVVKH-FVRPSSFTYTVLISGFVKMGMMEKGCQYLDK 678

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVA--FSKWG 149
           M + G   +    T L+  +   G F  + ++F  + ++G   +H+  I L++  +    
Sbjct: 679 MLEDGLSPNAVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSGLWRAMA 738

Query: 150 EVDKACELIERMDDCNIR--LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
              K   ++E   +  ++  L  K    +            A+++  K+ KS    +  +
Sbjct: 739 RKKKRQVIVEPGKEKLLQRLLQTKPIVSISSSLCNYGSKSFAMEVIGKVKKS-IIPNLYL 797

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           ++ I+ G C   +L+ A      M+  GI P+    + L+ S  + G++   + +++E+ 
Sbjct: 798 HNTIVTGYCAAGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAI-DLFEET 856

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 ++C++                LL+ + + E   D    ML + K  + PN  S+
Sbjct: 857 KCEPDQVMCST----------------LLKGLCESERPLDALALMLEMQKKGIYPNKDSY 900

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + ++  L        A  + ++M  +        +  LI  LC   +L E+  L   M +
Sbjct: 901 EKLLQCLCYSRLTMEAFKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQ 960

Query: 388 SGFKPTHFTLNSMFRCLCRRQDV 410
           SG    + T   + + L + Q +
Sbjct: 961 SGRSLLNCTKPGLLKMLNQNQQL 983



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 46/287 (16%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSV--GLVEEANMLFDQVKR 58
           M +  +R  RI     L ++VVK   F+ P +  + +   G V  G++E+     D++  
Sbjct: 624 MINAYARNGRIDEANELVEEVVKH--FVRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 681

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL---------- 108
           +GL  PN   Y  L+    K             M + G  +D      LL          
Sbjct: 682 DGLS-PNAVLYTSLIGHFLKKGDFKFSFTLFGLMGENGIKHDHIAYITLLSGLWRAMARK 740

Query: 109 ---QV-------------------------YCNSGQFDKALSVFNEIIDHGWVDEHVFSI 140
              QV                          CN G    A+ V  ++      + ++ + 
Sbjct: 741 KKRQVIVEPGKEKLLQRLLQTKPIVSISSSLCNYGSKSFAMEVIGKVKKSIIPNLYLHNT 800

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++  +   G +D+A   +E M    I  N+ T+ +L+   ++   ++ A+ LF+   ++ 
Sbjct: 801 IVTGYCAAGRLDEAYNHLESMQKEGIVPNQVTYTILMKSHIEAGDIESAIDLFE---ETK 857

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
              D  M   ++ GLC++++   AL L  EM+  GI P+ +   KL+
Sbjct: 858 CEPDQVMCSTLLKGLCESERPLDALALMLEMQKKGIYPNKDSYEKLL 904


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 166/647 (25%), Positives = 274/647 (42%), Gaps = 85/647 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  VG V+E   +F ++ RE  C P   +Y  ++ AL +S           EM++ 
Sbjct: 45  LIHGLCEVGRVDEGINIFKKM-REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRER 103

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   + +T T ++   C   + ++   + +E+++ G V     ++ L+  + K G V+ A
Sbjct: 104 GCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAA 163

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+++ M   +   NE+T+  LI GF +K  V +A+ L  KM +S        Y+ +I G
Sbjct: 164 QEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG 223

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNT 271
            CK   L+ A +L + M  +G+ PD    S  I +   +G   E  +L   + E + +  
Sbjct: 224 QCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE-KGIKA 282

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++  +++      G +D A +LL  M+  + +                PN+S+++ +I
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL----------------PNSSTYNALI 326

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K+ K+  AL L   M Q G    V  Y  LI  +      + ++ +L +M  SG++
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  +   +     C R ++  A +++  M  +G  P     TL+I      G    AF  
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLID-----------------------------IKRVDL 482
           L  M   G  P    YS  I  L+                              + + + 
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           ALELF  +  HGC P++  Y  +I GLCK  R+  A+ LF+ M  +G+ PS A YN L+N
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566

Query: 543 GWCKSGNIDQAMLCLSRMLEK-----------------ESGSP----------------- 568
             C+ G    A+  +  M+E                  E GS                  
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           D + +  LIDGL   G  D    L   ME +GC  +  T+  LI GL
Sbjct: 627 DEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 177/364 (48%), Gaps = 34/364 (9%)

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +  ++ A S+F  M + GC +N   Y NLI GLC   R++E   + ++M E    PT  T
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
              +   L      + A+NL  +MR +G EP +   T++I  +CK  K  E  R L +MV
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           ++G +P +  Y+A I G      V+ A E+   + ++ C P+   YN +I G C+ + V 
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE-------------- 562
            A  L ++M+   L PSV TYN LI+G CK G +D A   L+ M E              
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 563 -------------------KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
                              KE G   + + YT LIDG C AG+ DDA  L + M  + C 
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN  T+ ALI GLCK  + + AL+    M +KG+K  +  +  LI A L E +   A  +
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 663 LKEM 666
           L +M
Sbjct: 377 LDQM 380



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 242/565 (42%), Gaps = 53/565 (9%)

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--DDCNIRLNEKTFC 174
           + A SVFN +   G     V ++ L+    + G VD+   + ++M  DDC   +  +T+ 
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTV--RTYT 78

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
           V++H   +  R  +A+ LF +M + G   +   Y V+I  +CK  +LE   ++  EM   
Sbjct: 79  VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138

Query: 235 GITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G+ P     + LI     EG  E    + ++      N      N ++       ++ +A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL  M++                  ++P+  +++ +I+   K G LD A  L   M +
Sbjct: 199 MALLSKMLESR----------------LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + + + Y+  ID LC   R+EE+  L   ++E G K       ++    C+   +  
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A +L+ +M  +   P       LI  LCK  K  EA   +  M+Q+G    +  Y+  I 
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            ++     D A  +   + + G  PDV  Y   I   C    + EAED+ + M  +G++P
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID-------------- 578
              TY L+I+ +   G ++ A   L RM +     P   TY+ LI               
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDT-GCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 579 GLCIA---------------GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            LC +                + + A+ L+ +M E GC+PN  T+  LI GLCK  R   
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 624 ALVHFRMMKEKGMKPDMFVFVALIS 648
           A   F  M E+G+ P   ++ +L++
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLN 566



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 215/483 (44%), Gaps = 54/483 (11%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           V+ A  +F+ M K G   +   Y  +I GLC+  +++  + ++ +M+     P       
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPT------ 73

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
                                  V T T+    I+  L  +G   +A NL   M      
Sbjct: 74  -----------------------VRTYTV----IVHALFESGRRMEAINLFSEM------ 100

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            + G E          PN  ++ ++IN + K+ KL+    +  EM + G + +V  YN L
Sbjct: 101 RERGCE----------PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           IDG C    +E + E+L  M  +   P   T N +    CR+++V  A+ L+ KM     
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P V     LI   CK G    A+R L  M + G +PD   YS  I  L    R++ A  
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF  +   G   + V Y  +I G CKA ++ +A  L + M+T+  +P+ +TYN LI+G C
Sbjct: 271 LFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLC 330

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K   + +A+L +  M++K      V TYT LI  +   G  D A  + ++M   G  P+ 
Sbjct: 331 KERKVQEALLLMESMIQK-GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF--LSELNPPLAFEVL 663
             + A I   C     + A     MM E+G+ PD   +  +I A+  L  LNP  AF+VL
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNP--AFDVL 447

Query: 664 KEM 666
           K M
Sbjct: 448 KRM 450



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 212/513 (41%), Gaps = 52/513 (10%)

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           LV  +   +V+ A  +   M     R NE ++  LIHG  +  RVD+ + +F KM +   
Sbjct: 11  LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDC 70

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
                 Y VI+  L ++ +   A+ L+SEM+  G  P+    + +I +   E +L     
Sbjct: 71  YPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLE---- 126

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                                                  +G  I D  VE     KG V 
Sbjct: 127 ---------------------------------------EGRRILDEMVE-----KGLV- 141

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +++ +I+   K+G ++ A  +   M    C  N   YN LI G C    +  +  L
Sbjct: 142 PSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMAL 201

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +M ES   P+  T NS+    C+   +  A  L+  M   G  P     ++ I  LCK
Sbjct: 202 LSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCK 261

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  EA      + ++G   + V Y+A I G     ++D A  L   +    C P+   
Sbjct: 262 KGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSST 321

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I GLCK ++V EA  L   MI KGL  +V TY +LI    K G+ D A   L +M+
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381

Query: 562 EKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
              SG  PDV  YT  I   C  G   +A  + + M E+G  P+ +T+  +I        
Sbjct: 382 --SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              A    + M + G  P    +  LI   L E
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE 472



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 250/624 (40%), Gaps = 89/624 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C+ +      ++  L   G   EA  LF +++  G C PN ++Y  ++ A+CK   ++  
Sbjct: 70  CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG-CEPNIHTYTVMINAMCKETKLEEG 128

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
              L EM + G      T   L+  YC  G  + A  + + +  +    +E  ++ L+  
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F +   V +A  L+ +M +  +  +  T+  LIHG  K   +D A +L + M ++G   D
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLV 260
              Y V I  LCK  ++E A  L++ +K  GI  +  I + LI      G++    +LL 
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           + + ED   N+ T   N+++  L     + +A  L+++MI+               KG +
Sbjct: 309 RMLTEDCLPNSSTY--NALIDGLCKERKVQEALLLMESMIQ---------------KG-L 350

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
                ++ I+I  +LK+G  D A  +  +M   G   +V++Y   I   C    ++E+ +
Sbjct: 351 KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAED 410

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           ++  M E G  P   T   +         +  A +++++M   G +P     + LIK L 
Sbjct: 411 MMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLL 470

Query: 441 KHG-----------------------------KAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           K                               K   A      M++ G  P+I  Y+  I
Sbjct: 471 KEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLI 530

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL  + R+ +A +LF  +   G  P    YN +++  C+     +A  L   M+  G +
Sbjct: 531 IGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHL 590

Query: 532 PSVATYN-----------------------------------LLINGWCKSGNIDQAMLC 556
           P + + N                                   +LI+G  K+G  D     
Sbjct: 591 PLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSEL 650

Query: 557 LSRMLEKESGSPDVITYTTLIDGL 580
           L  M E         TY  LI+GL
Sbjct: 651 LGVM-EARGCQIHPQTYRMLIEGL 673


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 226/493 (45%), Gaps = 19/493 (3%)

Query: 131 GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
           G+    VF  L+ +       D+A E    M +  +    +T   L+  F+K +R + A 
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L+ +M +    S    ++++I  LCK  +L+ A      M+ SG+ P+    + ++   
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 251 SDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              G  E    +    + + +   +    S++  +   G +++A  + + M++       
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ------- 319

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   KG + P+   ++ +I+     G LD+A +   EM + G    +  YN+LI  
Sbjct: 320 --------KG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           L    R +E+  +++E++E G  P   T N +    CR  +   A  L  +M   G +P 
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            K  T L+  L K  +  EA      +  EG LPD++ ++A I G      V  A EL +
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+      PD V +N I+ G C+  +V EA +LF+EM  +G+ P   ++N LI+G+ + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I  A    + ML+    +P V+TY  L+ GLC     D A  L  EM  KG  P+  T+
Sbjct: 551 DIKDAFRVRNEMLDT-GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 609 MALITGLCKCDRP 621
             LI G+ K + P
Sbjct: 610 FTLIEGIAKVNIP 622



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 250/571 (43%), Gaps = 54/571 (9%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD--QVKREGLCVPNNYSYNCLLEALCK 78
           V+ +R      AL  L + LG  G       +F+     R+ L   ++  ++ L+++ C 
Sbjct: 105 VIVARLPSPKPALHLLKQALGG-GTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCD 163

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HV 137
               D        M++ G      T   LL ++    + + A  ++ E+         + 
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+I++    K G++ KA + +  M+   ++ N  T+  ++HG+    RV+ A  +   M 
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +     D+  Y  +I G+CK  +LE A +++ EM   G+ P   I + LI          
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG-------- 335

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                             CN         G++D A      M+K               K
Sbjct: 336 -----------------FCN--------KGNLDMASAYKDEMLK---------------K 355

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G +SP  S+++ +I+ L  + + D A  + +E+ + G   +   YN LI+G C     ++
Sbjct: 356 G-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++ L  EM  SG KPT  T  S+   L ++  +  A +L +K+  +G  P V     LI 
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C +     AF  L DM +    PD V ++  + G     +V+ A ELF ++   G  P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D +++N +ISG  +   + +A  + NEM+  G  P+V TYN L+ G CK+   D A   L
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELL 594

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
             M+ K   +PD  TY TLI+G+     PD+
Sbjct: 595 KEMVSK-GMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 213/502 (42%), Gaps = 86/502 (17%)

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           GF S + ++D +I   C   + + A + +  MK  G+ P  E                  
Sbjct: 147 GFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIET----------------- 188

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                           CNS++ + +     + A+ L   M                F+  
Sbjct: 189 ----------------CNSLLSLFLKLNRTEAAWVLYAEM----------------FRLR 216

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +  +  +F+I+IN L K+GKL  A      M   G   N+  YN ++ G C+S R+E + 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M+    +P  FT  S+   +C++  +  A  +  +M  +G  P       LI   
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G    A  +  +M+++G  P +  Y++ I  L   +R D A  + ++I   G  PD 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 500 VAYNIIISGLC-----------------------------------KAQRVAEAEDLFNE 524
           + YNI+I+G C                                   K  R+ EA+DLF +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           + ++G++P V  +N LI+G C + N+  A   L  M ++    PD +T+ T++ G C  G
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREG 515

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + ++A  L++EM+ +G  P+ I+F  LI+G  +    + A      M + G  P +  + 
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           AL+          LA E+LKEM
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEM 597



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 169/373 (45%), Gaps = 27/373 (7%)

Query: 15  RVLAQDVVKS---RCFMSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           RV A D + +   R  + P +   G LI  +   G +EEA+ +F+++ ++GL  P+   Y
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL-RPSAVIY 329

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L++  C   ++D+      EM   G      T   L+       + D+A  +  EI +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G   D   ++IL+  + +     KA  L + M    I+  +KT+  L+H   KK+R+ +
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF K+T  G   D  M++ +I G C N  ++ A +L  +M    + PD    + ++ 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 249 SCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
               EG++    +E++++   R +    +  N+++      G I  A+ +   M+     
Sbjct: 510 GHCREGKVEE-ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML----- 563

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            D G           +P   +++ ++  L K+ + DLA  L +EM   G   +   Y  L
Sbjct: 564 -DTGF----------NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 366 IDGLCNSNRLEES 378
           I+G+   N  +E+
Sbjct: 613 IEGIAKVNIPDEN 625


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 262/563 (46%), Gaps = 65/563 (11%)

Query: 115 GQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           GQ D    +  ++   G+   E +F  ++  + + G  ++A E+  R+ +     + K +
Sbjct: 89  GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 148

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             ++   + ++R+     ++  M + GF  +   Y+V++  LCKN +++ A +L  EM  
Sbjct: 149 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 208

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            G  P+    + +I+S  + G    +VK   E R +        S+   L++    ++ Y
Sbjct: 209 KGCCPNAVSYTTVISSMCEVG----MVK---EGRQLAERFEPVVSVYNALINGLCKERDY 261

Query: 294 NLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
                  KG      GVE++  M+ KG +SPN  S+  +IN L   G+++LA SL  +M 
Sbjct: 262 -------KG------GVELMSEMVEKG-ISPNVISYSTLINELSNSGQIELAFSLLAQML 307

Query: 352 QIGC------------------------------------MQNVFLYNNLIDGLCNSNRL 375
           + GC                                      NV  YN L+ G C+   +
Sbjct: 308 KRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 367

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++  +   MEE G  P   T  S+     +R  + GA+ +  KM   G  P V   T +
Sbjct: 368 DKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSM 427

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHG 494
           ++ LC+H K  EA   +  M +E   P +  ++A I GL D  R+D A ++FR +   + 
Sbjct: 428 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYR 487

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P++V YN ++ GL KA R+ EA  L  E+  +G+  S +TYN L++G C +G    A+
Sbjct: 488 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIAL 547

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME--EKGCAPNRITFMALI 612
             + +M+     SPD IT   +I   C  G+ + A+ + + +    +   P+ I++  +I
Sbjct: 548 QLVGKMM-VNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVI 606

Query: 613 TGLCKCD-RPRAALVHFRMMKEK 634
            GLC+ + R    ++  RM+ E+
Sbjct: 607 WGLCRSNCREDGVILFERMISER 629



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 244/571 (42%), Gaps = 57/571 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I     VGL E A  +F ++K  G C P+   YN +L+ L     + ++ M  ++M+  
Sbjct: 116 VISVYRQVGLAERAVEMFYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 174

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G+  + +T   LL+  C + + D A  +  E+ + G     V ++ ++ +  + G V + 
Sbjct: 175 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG 234

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L ER +          +  LI+G  K+      ++L  +M + G + +   Y  +I  
Sbjct: 235 RQLAERFEPV-----VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINE 289

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L  + Q+E+A  L ++M   G  P+   LS L+  C                        
Sbjct: 290 LSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC------------------------ 325

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                       G+   A ++   MI+G      G++          PN  +++ ++   
Sbjct: 326 ---------FVRGTTFDALDMWNQMIRG-----FGLQ----------PNVVAYNTLVQGF 361

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G +D A+S+F  M +IGC  N+  Y +LI+G      LE +  +  +M  SG  P  
Sbjct: 362 CSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNV 421

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
               SM   LCR      A +L+  M  +   P V      IK LC  G+   A +    
Sbjct: 422 VVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 481

Query: 455 MVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           M Q+    P+IV Y+  + GL    R++ A  L R+I   G       YN ++ G C A 
Sbjct: 482 MEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAG 541

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM-LEKESGSPDVIT 572
               A  L  +M+  G  P   T N++I  +CK G  ++A+  L  +   +    PDVI+
Sbjct: 542 LPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVIS 601

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           YT +I GLC +   +D ++L+  M  +   P
Sbjct: 602 YTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 197/408 (48%), Gaps = 26/408 (6%)

Query: 279 IMRILVSNGSIDQAYNLLQAM------------------IKGEPIADVGVEMLMIFKG-T 319
           ++R L  +G +D    LLQ M                   +   +A+  VEM    K   
Sbjct: 81  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 140

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             P+   ++ +++TLL + ++ +   ++R+M + G   NVF YN L+  LC +N+++ + 
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +LL EM   G  P   +  ++   +C     VG +   R++  +  EP V     LI  L
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCE----VGMVKEGRQL-AERFEPVVSVYNALINGL 255

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK          +++MV++G  P+++ YS  I  L +  +++LA  L   +   GC P++
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              + ++ G        +A D++N+MI   GL P+V  YN L+ G+C  GNID+A+    
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M E+   SP++ TY +LI+G    G  + A+ +WN+M   GC PN + + +++  LC+ 
Sbjct: 376 HM-EEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRH 434

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + + A     +M ++   P +  F A I           A +V ++M
Sbjct: 435 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 155/386 (40%), Gaps = 55/386 (14%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           LS + +I     L   ++K  C  +   L  L++     G   +A  +++Q+ R     P
Sbjct: 290 LSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQP 349

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +YN L++  C   ++D        M++ G   +  T   L+  +   G  + A+ ++
Sbjct: 350 NVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIW 409

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           N+++  G   +  V++ ++ A  +  +  +A  LIE M   N   +  TF   I G    
Sbjct: 410 NKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 469

Query: 184 SRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            R+D A ++F +M +      +   Y+ ++ GL K  ++E A  L  E+   G+      
Sbjct: 470 GRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE----- 524

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                W     NT+             +GS +       A + G
Sbjct: 525 ---------------------WSTSTYNTLL------------HGSCN-------AGLPG 544

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ---NV 359
             +  VG    M+  G  SP+  + ++II    K GK + A+ +  ++   G  +   +V
Sbjct: 545 IALQLVGK---MMVNGK-SPDEITMNMIILAYCKQGKAERAVQML-DLVSCGRRKWRPDV 599

Query: 360 FLYNNLIDGLCNSNRLEESYELLREM 385
             Y N+I GLC SN  E+   L   M
Sbjct: 600 ISYTNVIWGLCRSNCREDGVILFERM 625



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 95/200 (47%), Gaps = 5/200 (2%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M   L R  +      L + + K  C  S       I+ L   G ++ A  +F Q++++ 
Sbjct: 427 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQY 486

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C PN  +YN LL+ L K+  ++      +E+   G  +   T   LL   CN+G    A
Sbjct: 487 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIA 546

Query: 121 LSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC---NIRLNEKTFCVL 176
           L +  +++ +G   DE   +++++A+ K G+ ++A ++++ +  C     R +  ++  +
Sbjct: 547 LQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD-LVSCGRRKWRPDVISYTNV 605

Query: 177 IHGFVKKSRVDKALQLFDKM 196
           I G  + +  +  + LF++M
Sbjct: 606 IWGLCRSNCREDGVILFERM 625


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 242/550 (44%), Gaps = 51/550 (9%)

Query: 118 DKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           D+   V+ E+++   V   +  + ++ A+SK G + +A   + ++    +  +  T+  L
Sbjct: 196 DEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSL 255

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           I G+ + + V+ A ++F+ M   G   +   Y  II GLC+  +++  + L+ +M+    
Sbjct: 256 ILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDC 315

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            P     + +I +                DR++  M L   + MR               
Sbjct: 316 YPTVRTYTVIIHAL------------FGNDRNLEGMDLF--NEMR--------------- 346

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
                               + +  PN  ++ ++++ + K+ KLD +  +  EM + G +
Sbjct: 347 --------------------ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLV 386

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN LI G C   R+E + E+L  ME +  +P   T N +     +R+ V  A+ L
Sbjct: 387 PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTL 446

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           + KM      P +     LI   CK G    A++ L  + + G +PD   YS  I  L  
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
            KR++ A +LF  +   G   + V Y  +I G CKA ++ EA  L   M ++  +P+ +T
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSST 566

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN LI G CK G + + +  +  M  K    P V TYT LI+ +   G  D A  ++N+M
Sbjct: 567 YNSLIYGVCKEGKVQEGLSMVENM-SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM 625

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
              G  P+  T+ A I   C     + A      M E G+ PD   +  LISA+      
Sbjct: 626 VSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLA 685

Query: 657 PLAFEVLKEM 666
             AF VLK M
Sbjct: 686 YDAFNVLKRM 695



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 249/581 (42%), Gaps = 51/581 (8%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           SYN LL  L +   +D ++    EM +     + YTL  ++  Y   G   +A    ++I
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 128 IDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
              G   D   ++ L++ + +  +V+ A ++   M +   R NE ++  +IHG  +  R+
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D+ + LF KM +         Y VII  L  N +    + L++EM+     P+       
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPN------- 353

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                                 V+T T++ +++ +       +D++  +L  M++     
Sbjct: 354 ----------------------VHTYTVMVDAMCK----ERKLDESRRILNEMME----- 382

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                     KG V P+  +++ +I    ++G+++ AL +   M    C  N   YN LI
Sbjct: 383 ----------KGLV-PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI 431

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      + ++  LL +M ES   P+  T NS+    C+      A  L+  ++  G  
Sbjct: 432 CGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV 491

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P     ++ I  LCK  +  EA      + ++G   + V Y+A I G     ++D A+ L
Sbjct: 492 PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              + +  C P+   YN +I G+CK  +V E   +   M   G+ P+VATY +LI    +
Sbjct: 552 LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G+ D A    ++M+      PDV TYT  I   C +G   +A  +   M E G  P+ +
Sbjct: 612 EGDFDHANRVFNQMVSF-GHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSL 670

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           T+  LI+   +      A    + M + G  P   ++  LI
Sbjct: 671 TYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 236/523 (45%), Gaps = 29/523 (5%)

Query: 51  MLFDQVKR------EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           ++ D++KR        + VPN Y+ N ++ A  K  ++    + + ++   G   D +T 
Sbjct: 193 LMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTY 252

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM-- 161
           T L+  YC +   + A  VFN + + G   +E  ++ ++    + G +D+   L ++M  
Sbjct: 253 TSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMRE 312

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           DDC   +  +T+ V+IH      R  + + LF++M +     +   Y V++  +CK ++L
Sbjct: 313 DDCYPTV--RTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKL 370

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSI 279
           + + ++ +EM   G+ P     + LI    +EG  E  L +  + E  +        N +
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +        + +A  LL  M++ +                ++P+  +++ +I+   K G 
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESK----------------LTPSLVTYNSLIHVQCKAGH 474

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            D A  L   + + G + + + Y+  ID LC S R+EE+ +L   ++E G K       +
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C+   +  A++L+ +M  +   P       LI  +CK GK  E    + +M + G
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P +  Y+  I  ++     D A  +F  + + G  PDV  Y   I   C +  V EAE
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAE 654

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            +   MI  G++P   TY LLI+ + + G    A   L RML+
Sbjct: 655 GMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLD 697



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 8/363 (2%)

Query: 291 QAYNLLQAMIKG----EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           ++YN L  M+      + +  V  EML      + PN  + + ++N   K G +  A   
Sbjct: 180 RSYNELLMMLARFLMIDEMKRVYTEML---NDMIVPNIYTLNTMVNAYSKMGNIVEANLY 236

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             ++ Q G   + F Y +LI G C +N +  +Y++   M   G +    +  ++   LC 
Sbjct: 237 VSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCE 296

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +   ++L +KMR     P V+  T++I  L  + + +E      +M +    P++  
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  +  +   +++D +  +  ++   G  P VV YN +I G C+  R+  A ++   M 
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
           +    P+  TYN LI G+ K  ++ +AM  LS+MLE +  +P ++TY +LI   C AG  
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL-TPSLVTYNSLIHVQCKAGHF 475

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D A  L + ++E G  P++ T+   I  LCK  R   A   F  +KEKG+K +  ++ AL
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 647 ISA 649
           I  
Sbjct: 536 IDG 538



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 139/308 (45%), Gaps = 1/308 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           LD    + R+   I    +V  YN L+  L     ++E   +  EM      P  +TLN+
Sbjct: 160 LDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           M     +  ++V A   V K+   G  P     T LI   C++     A++    M  +G
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              + V Y+  I GL +  R+D  + LF+ +    C P V  Y +II  L    R  E  
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           DLFNEM  +   P+V TY ++++  CK   +D++   L+ M+EK    P V+TY  LI G
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK-GLVPSVVTYNALIRG 398

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C  GR + A+ +   ME   C PN  T+  LI G  K      A+     M E  + P 
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458

Query: 640 MFVFVALI 647
           +  + +LI
Sbjct: 459 LVTYNSLI 466



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 197/431 (45%), Gaps = 22/431 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL-KEMQD 94
           +I  L   G ++E   LF ++ RE  C P   +Y  ++ AL  +   +L  M L  EM++
Sbjct: 290 IIHGLCEAGRIDEGISLFKKM-REDDCYPTVRTYTVIIHALFGN-DRNLEGMDLFNEMRE 347

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                + +T T ++   C   + D++  + NE+++ G V   V ++ L+  + + G ++ 
Sbjct: 348 RSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A E++  M+  N R NE+T+  LI GF K+  V KA+ L  KM +S        Y+ +I 
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIH 467

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI-TSC-SDEGELTLLVKEIWEDRDVNT 271
             CK    + A +L   +K +G+ PD    S  I T C S   E    +    +++ +  
Sbjct: 468 VQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKA 527

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++  +++      G ID+A +LL+ M   + +                PN+S+++ +I
Sbjct: 528 NEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL----------------PNSSTYNSLI 571

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             + K+GK+   LS+   M+++G    V  Y  LI+ +      + +  +  +M   G K
Sbjct: 572 YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  +T  +     C   +V  A  ++ +M   G  P     TLLI    + G A +AF  
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNV 691

Query: 452 LTDMVQEGFLP 462
           L  M+  G  P
Sbjct: 692 LKRMLDAGCDP 702


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 236/546 (43%), Gaps = 53/546 (9%)

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++ M +   RL+   +  L+    K +    A  ++ +M   GF      Y  ++  LCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLI-TSC--SDEGELTLLVKEIWEDRDVNTMTL 274
           N  ++ A     ++   G   D  + + L+  +C   D GE   + +++ ++ +    ++
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++  L   G +++A+ L Q M++               KG   P+T ++ ++I   
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVE---------------KG-CQPSTRTYTVLIKAK 310

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G  D A+ +  EM    C+ NV  Y  LID LC   ++EE+  + R+M + G  P  
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N++    C+   VV A  L+  M     +P ++    L++ LC+  K+ +AF  L  
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 430

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +V  G LPD V Y+  + G     ++++A  +F  + + G  PD   +  +I GLCK  R
Sbjct: 431 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 490

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE------------ 562
           + +A  +   M+ KG+     T+  LI+G CK G           M+E            
Sbjct: 491 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 550

Query: 563 ----------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                                 K    P V+T+T LI+G C AG    ++ +   M++ G
Sbjct: 551 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C+PN  T+  +I GLC   R   A      M   G+ P+ F +  L+ A +       AF
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 670

Query: 661 EVLKEM 666
           +++  M
Sbjct: 671 QIVSTM 676



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 242/557 (43%), Gaps = 65/557 (11%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +S LL+  +K      A  +  RM +    L    +  +++   K   V  A     K+ 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 198 KSGFASD------------------------------------AAMYDVIIGGLCKNKQL 221
           + GF  D                                    +  Y ++I GLC+  +L
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLL 275
           E A QL  EM   G  P     + LI +  D G     +K + E        +V+T T+L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + + R     G I++A  + + M+                K  + P   +F+ +IN   
Sbjct: 342 IDRLCR----EGKIEEANGVFRKML----------------KHGLCPGIITFNALINGYC 381

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G +  A  L   M +  C  N+  YN L++GLC  ++  +++ LLR + ++G  P   
Sbjct: 382 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 441

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +    C+   +  A N+   M   G EP     T LI  LCK G+  +A   L  M
Sbjct: 442 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 501

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V++G   D V ++A I G   I +      LF ++  + C      +N  +  L K  ++
Sbjct: 502 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 561

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYT 574
            EA  +  +M+  GL+PSV T+ +LI G C++G    ++  L RM  K++G SP+V TYT
Sbjct: 562 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM--KQAGCSPNVYTYT 619

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +I+GLC  GR ++A  +   M   G +PN  T+  L+    K  R   A      M + 
Sbjct: 620 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 679

Query: 635 GMKPDMFVFVALISAFL 651
           G +P+  ++ AL+S F+
Sbjct: 680 GCQPNSHIYSALLSGFV 696



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 274/627 (43%), Gaps = 40/627 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+ CL  + +   A +++ ++  EG  V     Y  ++ ALCK+  V   EM   ++   
Sbjct: 165 LLMCLAKLNMGFVAFLVYRRMVNEGF-VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRL 223

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDK 153
           G+G D +  T L+   C      +A  VF ++   ++   +   +SIL+    + G +++
Sbjct: 224 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 283

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L + M +   + + +T+ VLI         DKA+++ D+M       +   Y ++I 
Sbjct: 284 AFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 343

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LC+  ++E A  ++ +M   G+ P     + LI     EG         W    V+   
Sbjct: 344 RLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG---------WV---VSAFQ 391

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           LL  S+M       +I     L++ + +        + +  +    + P+  +++I+++ 
Sbjct: 392 LL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K+G+L++A ++F  M   G   + F +  LIDGLC   RLE++  +L  M + G    
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFL 452
             T  ++    C+         L   M V+       H     +  L K  K  EA   L
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENM-VENRCLTTAHTFNCFLDALGKDYKLNEANAML 568

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M++ G +P +V ++  I G        L+L++   +   GC P+V  Y III+GLC  
Sbjct: 569 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            RV EAE +   M + G+ P+  TY +L+    K+G +D+A   +S M+ K    P+   
Sbjct: 629 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV-KNGCQPNSHI 687

Query: 573 YTTLIDGLCIAGRPD-----------DAIMLWNEMEEKGCAPNRIT---------FMALI 612
           Y+ L+ G  ++               DA  L +E  +  C  N I          +  L+
Sbjct: 688 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLV 747

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPD 639
            GLCK  R   A    + M + G+ PD
Sbjct: 748 VGLCKEGRIIEADQLTQDMVKHGLFPD 774



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 156/644 (24%), Positives = 276/644 (42%), Gaps = 54/644 (8%)

Query: 4   ILSRARRI---APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +L+  RR       RV  +   +  C  +      LI  L   G +EEA  L  ++  +G
Sbjct: 236 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 295

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+  +Y  L++A C     D     L EM       + +T T L+   C  G+ ++A
Sbjct: 296 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             VF +++ HG     + F+ L+  + K G V  A +L+  M+  N + N +T+  L+ G
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + S+  KA  L  ++  +G   D   Y++++ G CK  QL MA  +++ M  +G+ PD
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474

Query: 240 FEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRI--------- 282
               + LI      G L        +++ K I  D    T T L +   +I         
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV--TFTALIDGHCKIGKAKDVCFL 532

Query: 283 ---LVSNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
              +V N  +  A+     L A+ K   + +    +  + K  + P+  +  I+I    +
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+  L+L +   M Q GC  NV+ Y  +I+GLCN+ R+EE+  +L  M   G  P HFT
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 652

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-----------WVKHNTLLIKELCKHGKA 445
              + +   +   +  A  +V  M   G +P           +V  NT +          
Sbjct: 653 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 712

Query: 446 MEAFRF---------LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           ++A            L++ +++  +P    Y+  + GL    R+  A +L +D+  HG  
Sbjct: 713 LDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLF 772

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PD  A + II   CK  +     +    ++    +PS A+Y  +I+G    G + +A   
Sbjct: 773 PDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKL 831

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGR--PDDAIMLWNEMEE 598
           +S ++ + +G  + +  T  I+ L       PD  + L   +E+
Sbjct: 832 VSDLV-RHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQ 874



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 267/627 (42%), Gaps = 72/627 (11%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  +F+++ +E  C PN+ +Y+ L+  LC++  ++      +EM + G      T T L
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  C+ G  DKA+ + +E+     V + H ++IL+    + G++++A  +  +M    +
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 366

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI+G+ K+  V  A QL   M K     +   Y+ ++ GLC+  +   A  
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 426

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L   +  +G+ PD    + L+     EG+L +                            
Sbjct: 427 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM---------------------------- 458

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                A+N+  +M         G+E          P+  +F  +I+ L K G+L+ A  +
Sbjct: 459 -----AFNIFNSM------NSAGLE----------PDGFTFTALIDGLCKLGRLEQANGI 497

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M + G   +   +  LIDG C   + ++   L   M E+    T  T N     L +
Sbjct: 498 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 557

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  ++ KM   G  P V  +T+LI+  C+ G+   + + L  M Q G  P++  
Sbjct: 558 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 617

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I GL +  RV+ A  +   + + G  P+   Y +++    KA R+  A  + + M+
Sbjct: 618 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 677

Query: 527 TKGLIPSVATYNLLINGW------------CKSGNIDQAML--------CLSRMLEKESG 566
             G  P+   Y+ L++G+              +G++D   L        CLS  + K+ G
Sbjct: 678 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEI-KKCG 736

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            P    Y  L+ GLC  GR  +A  L  +M + G  P++    ++I   CK  +    L 
Sbjct: 737 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLE 795

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSE 653
             +++ +    P    +  +I    +E
Sbjct: 796 FMKLVLDNKFVPSFASYCWVIHGLRNE 822


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 236/546 (43%), Gaps = 53/546 (9%)

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++ M +   RL+   +  L+    K +    A  ++ +M   GF      Y  ++  LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLI-TSC--SDEGELTLLVKEIWEDRDVNTMTL 274
           N  ++ A     ++   G   D  + + L+  +C   D GE   + +++ ++ +    ++
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++  L   G +++A+ L Q M++               KG   P+T ++ ++I   
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVE---------------KG-CQPSTRTYTVLIKAK 287

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G  D A+ +  EM    C+ NV  Y  LID LC   ++EE+  + R+M + G  P  
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N++    C+   VV A  L+  M     +P ++    L++ LC+  K+ +AF  L  
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 407

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +V  G LPD V Y+  + G     ++++A  +F  + + G  PD   +  +I GLCK  R
Sbjct: 408 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 467

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE------------ 562
           + +A  +   M+ KG+     T+  LI+G CK G           M+E            
Sbjct: 468 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 527

Query: 563 ----------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                                 K    P V+T+T LI+G C AG    ++ +   M++ G
Sbjct: 528 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C+PN  T+  +I GLC   R   A      M   G+ P+ F +  L+ A +       AF
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 647

Query: 661 EVLKEM 666
           +++  M
Sbjct: 648 QIVSTM 653



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 242/557 (43%), Gaps = 65/557 (11%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +S LL+  +K      A  +  RM +    L    +  +++   K   V  A     K+ 
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 198 KSGFASD------------------------------------AAMYDVIIGGLCKNKQL 221
           + GF  D                                    +  Y ++I GLC+  +L
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLL 275
           E A QL  EM   G  P     + LI +  D G     +K + E        +V+T T+L
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + + R     G I++A  + + M+                K  + P   +F+ +IN   
Sbjct: 319 IDRLCR----EGKIEEANGVFRKML----------------KHGLCPGIITFNALINGYC 358

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G +  A  L   M +  C  N+  YN L++GLC  ++  +++ LLR + ++G  P   
Sbjct: 359 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +    C+   +  A N+   M   G EP     T LI  LCK G+  +A   L  M
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 478

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V++G   D V ++A I G   I +      LF ++  + C      +N  +  L K  ++
Sbjct: 479 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 538

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYT 574
            EA  +  +M+  GL+PSV T+ +LI G C++G    ++  L RM  K++G SP+V TYT
Sbjct: 539 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM--KQAGCSPNVYTYT 596

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +I+GLC  GR ++A  +   M   G +PN  T+  L+    K  R   A      M + 
Sbjct: 597 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 656

Query: 635 GMKPDMFVFVALISAFL 651
           G +P+  ++ AL+S F+
Sbjct: 657 GCQPNSHIYSALLSGFV 673



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 249/551 (45%), Gaps = 20/551 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+ CL  + +   A +++ ++  EG  V     Y  ++ ALCK+  V   EM   ++   
Sbjct: 142 LLMCLAKLNMGFVAFLVYRRMVNEGF-VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRL 200

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDK 153
           G+G D +  T L+   C      +A  VF ++   ++   +   +SIL+    + G +++
Sbjct: 201 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 260

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L + M +   + + +T+ VLI         DKA+++ D+M       +   Y ++I 
Sbjct: 261 AFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 320

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LC+  ++E A  ++ +M   G+ P     + LI     EG         W    V+   
Sbjct: 321 RLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG---------WV---VSAFQ 368

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           LL  S+M       +I     L++ + +        + +  +    + P+  +++I+++ 
Sbjct: 369 LL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 426

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K+G+L++A ++F  M   G   + F +  LIDGLC   RLE++  +L  M + G    
Sbjct: 427 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 486

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFL 452
             T  ++    C+         L   M V+       H     +  L K  K  EA   L
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENM-VENRCLTTAHTFNCFLDALGKDYKLNEANAML 545

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M++ G +P +V ++  I G        L+L++   +   GC P+V  Y III+GLC  
Sbjct: 546 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 605

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            RV EAE +   M + G+ P+  TY +L+    K+G +D+A   +S M+ K    P+   
Sbjct: 606 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV-KNGCQPNSHI 664

Query: 573 YTTLIDGLCIA 583
           Y+ L+ G  ++
Sbjct: 665 YSALLSGFVLS 675



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 278/663 (41%), Gaps = 76/663 (11%)

Query: 4   ILSRARRI---APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +L+  RR       RV  +   +  C  +      LI  L   G +EEA  L  ++  +G
Sbjct: 213 VLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 272

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+  +Y  L++A C     D     L EM       + +T T L+   C  G+ ++A
Sbjct: 273 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             VF +++ HG     + F+ L+  + K G V  A +L+  M+  N + N +T+  L+ G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + S+  KA  L  ++  +G   D   Y++++ G CK  QL MA  +++ M  +G+ PD
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 240 FEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRI--------- 282
               + LI      G L        +++ K I  D    T T L +   +I         
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV--TFTALIDGHCKIGKAKDVCFL 509

Query: 283 ---LVSNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
              +V N  +  A+     L A+ K   + +    +  + K  + P+  +  I+I    +
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+  L+L +   M Q GC  NV+ Y  +I+GLCN+ R+EE+  +L  M   G  P HFT
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM--EAFRFLTD 454
              + +   +   +  A  +V  M   G +P     + L+        A+   A     D
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 689

Query: 455 MVQEGFLP---DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +          D  C S+ +  L+D   VD AL++  +I   G  P    YN ++ GLCK
Sbjct: 690 LDARSLSSEENDNNCLSSHVFRLMD---VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCK 745

Query: 512 AQRVAEAEDLFNEMITKGL----------------------------------IPSVATY 537
             R+ EA+ L  +M+  GL                                  +PS A+Y
Sbjct: 746 EGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASY 805

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR--PDDAIMLWNE 595
             +I+G    G + +A   +S ++ + +G  + +  T  I+ L       PD  + L   
Sbjct: 806 CWVIHGLRNEGRVQEAQKLVSDLV-RHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKA 864

Query: 596 MEE 598
           +E+
Sbjct: 865 IEQ 867



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 147/642 (22%), Positives = 270/642 (42%), Gaps = 86/642 (13%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  +F+++ +E  C PN+ +Y+ L+  LC++  ++      +EM + G      T T L
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  C+ G  DKA+ + +E+     V + H ++IL+    + G++++A  +  +M    +
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 343

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI+G+ K+  V  A QL   M K     +   Y+ ++ GLC+  +   A  
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 403

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L   +  +G+ PD    + L+     EG+L +                            
Sbjct: 404 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM---------------------------- 435

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                A+N+  +M         G+E          P+  +F  +I+ L K G+L+ A  +
Sbjct: 436 -----AFNIFNSM------NSAGLE----------PDGFTFTALIDGLCKLGRLEQANGI 474

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M + G   +   +  LIDG C   + ++   L   M E+    T  T N     L +
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  ++ KM   G  P V  +T+LI+  C+ G+   + + L  M Q G  P++  
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 594

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I GL +  RV+ A  +   + + G  P+   Y +++    KA R+  A  + + M+
Sbjct: 595 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 654

Query: 527 TKGLIPSVATYNLLINGW------------CKSGNIDQAML--------CLS----RMLE 562
             G  P+   Y+ L++G+              +G++D   L        CLS    R+++
Sbjct: 655 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 714

Query: 563 -----------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                      K+ G P    Y  L+ GLC  GR  +A  L  +M + G  P++    ++
Sbjct: 715 VDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSI 773

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           I   CK  +    L   +++ +    P    +  +I    +E
Sbjct: 774 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 815


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 166/650 (25%), Positives = 269/650 (41%), Gaps = 93/650 (14%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           +LFD +    +  P+ Y Y+ ++ +LC+    +  +  +  M+             L+  
Sbjct: 117 LLFDDIVSANV-QPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHG 175

Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
            C S +  +AL + N ++  G ++ +V +        +G+ ++A  L + M +  +  N 
Sbjct: 176 LCKSRRIWEALEIKNCLMQKG-LEANVVTY-------YGKFNEAELLFKEMGEKGLCANH 227

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ +LI  F ++  +D A+   DKMTK+        Y+ +I G CK      A   + E
Sbjct: 228 ITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDE 287

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M   G+TP     + LI+   +EGE        W                          
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGE--------WH----------------------KAF 317

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           + YN + A  KG                 +SPNT +F  II+ L +   +  A+ LF EM
Sbjct: 318 KVYNEMTA--KG-----------------ISPNTYTFTAIISGLCRANMMAEAIRLFGEM 358

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            +   M +   YN +I+G C S  + E++ LL EM   GF P  +T   +   LC    V
Sbjct: 359 KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A   V  +    H+      + L+   CK G+  +A      MV+ G   D+VCY+  
Sbjct: 419 SEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL 478

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G            L +++  HG  PD V Y  +I    KA  + EA  L++ M+ +G 
Sbjct: 479 IDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGC 538

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT------------------ 572
           +P+V TY  LING CK+G +D+A L LS+       +P+ IT                  
Sbjct: 539 LPNVVTYTALINGLCKAGLMDKAEL-LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAV 597

Query: 573 ----------------YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
                           Y  LI G C  G+ ++A  L + M +    P+ IT+  +I   C
Sbjct: 598 QLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQC 657

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K    + A+  +  M +KG+KPD   +  L+           AFE+  EM
Sbjct: 658 KRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEM 707



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/577 (25%), Positives = 247/577 (42%), Gaps = 65/577 (11%)

Query: 69  YNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           YN L+  LCKS  + + +E++   MQ    G +   +T         G+F++A  +F E+
Sbjct: 169 YNVLIHGLCKSRRIWEALEIKNCLMQK---GLEANVVTYY-------GKFNEAELLFKEM 218

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            + G    H+ +SIL+ +F + GE+D A   +++M   +I      +  LI+G+ K    
Sbjct: 219 GEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNA 278

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
             A   FD+M   G       Y  +I G C   +   A ++Y+EM   GI+P+    + +
Sbjct: 279 SAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAI 338

Query: 247 ITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
           I+       +   ++   E  +R +    +  N ++     +G+I +A++LL  M+    
Sbjct: 339 ISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG--- 395

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       KG V P+T ++  +I+ L   G++  A     ++ +     N   Y+ 
Sbjct: 396 ------------KGFV-PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L+ G C   R +++    R M E G          +     R  D      L+++M   G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P     T +I    K G   EAF     MV EG LP++V Y+A I GL     +D A 
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562

Query: 485 ELFRDI---------CAHGCCPD-------------------------VVAYNIIISGLC 510
            L ++            +GC  D                          V+YNI+I G C
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFC 622

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +  ++ EA  L + M    ++P   TY+ +I   CK  N+ +A+     ML+K    PD 
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDK-GLKPDT 681

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           + Y+ L+ G CIAG  + A  L +EM  +G   N +T
Sbjct: 682 LAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 184/398 (46%), Gaps = 27/398 (6%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL  +++     DV +    I    V P+   +  ++ +L +    + A  +   M    
Sbjct: 102 LLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQ 161

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYE--------------------------LLREMEES 388
           C  ++ +YN LI GLC S R+ E+ E                          L +EM E 
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEK 221

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G    H T + +    CRR ++  A+  + KM     E  V     LI   CK G A  A
Sbjct: 222 GLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAA 281

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
             +  +M+ +G  P +V Y++ I G  +      A +++ ++ A G  P+   +  IISG
Sbjct: 282 KYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISG 341

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC+A  +AEA  LF EM  + ++PS  TYN++I G C+SGNI +A   L  M+ K    P
Sbjct: 342 LCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGK-GFVP 400

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D  TY  LI GLC  GR  +A    +++ +     N + + AL+ G CK  R + A+   
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R+M E+G+  D+  +  LI     E +    F +LKEM
Sbjct: 461 RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 208/489 (42%), Gaps = 53/489 (10%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M DCN+    +T   L++G ++  R +  L LFD +  +    D  +Y  ++  LC+ K 
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 221 LEMALQLYSEM--------------------KGSGITPDFEIL---------SKLITSCS 251
              A ++   M                    K   I    EI          + ++T   
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 252 DEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              E  LL KE+ E     +  T ++L +S  R     G +D A   L  M K       
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCR----RGEMDNAIGFLDKMTKAS----- 257

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   + TV P    ++ +IN   K G    A   F EM   G    V  Y +LI G
Sbjct: 258 -------IEFTVYP----YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISG 306

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            CN     +++++  EM   G  P  +T  ++   LCR   +  A+ L  +M+ +   P 
Sbjct: 307 YCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPS 366

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                ++I+  C+ G   EAF  L +MV +GF+PD   Y   I GL  + RV  A E   
Sbjct: 367 EVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD 426

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+       + + Y+ ++ G CK  R  +A      M+ +G+   +  Y +LI+G  +  
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +  +A+  L + +      PD + YT +ID    AG   +A  LW+ M ++GC PN +T+
Sbjct: 487 DT-RALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTY 545

Query: 609 MALITGLCK 617
            ALI GLCK
Sbjct: 546 TALINGLCK 554



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 238/554 (42%), Gaps = 41/554 (7%)

Query: 11  IAPLRVLAQDVVKSR----------CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           I    VL   + KSR          C M  G    ++   G      EA +LF ++  +G
Sbjct: 166 IVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFN---EAELLFKEMGEKG 222

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           LC  N+ +Y+ L+++ C+   +D     L +M      +  Y    L+  YC  G    A
Sbjct: 223 LCA-NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAA 281

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
              F+E+ID G     V ++ L+  +   GE  KA ++   M    I  N  TF  +I G
Sbjct: 282 KYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISG 341

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + + + +A++LF +M +         Y+V+I G C++  +  A  L  EM G G  PD
Sbjct: 342 LCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPD 401

Query: 240 FEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNS-IMRILVSNGSIDQAYNLL 296
                 LI+     G ++   KE  +D  +D + +  +C S ++      G    A +  
Sbjct: 402 TYTYRPLISGLCSVGRVSE-AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460

Query: 297 QAMIKGEPIADVGVEMLMIFKGT--------------------VSPNTSSFDIIINTLLK 336
           + M++     D+    ++I  GT                    + P+   +  +I+   K
Sbjct: 461 RVMVERGVAMDLVCYAILI-DGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSK 519

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G L  A  L+  M   GC+ NV  Y  LI+GLC +  ++++  L +E   S   P H T
Sbjct: 520 AGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHIT 579

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
                  L R  ++  A+ L   M ++G         +LI+  C+ GK  EA + L  M 
Sbjct: 580 YGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMT 638

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
               LPD + YS  I        +  A++L+  +   G  PD +AY+ ++ G C A  + 
Sbjct: 639 DNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELE 698

Query: 517 EAEDLFNEMITKGL 530
           +A +L +EMI +G+
Sbjct: 699 KAFELRDEMIRRGM 712



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 15/357 (4%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLD-----LALSLFREMTQIGCMQNVFLYNNLIDGL 369
           I +G  S   +  D  I+  LK   +D     L+L+  R M     M  V   + L++GL
Sbjct: 47  ILRGKQSWRIAFNDPFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGL 106

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
               R  +   L  ++  +  +P  +  +++ R LC  +D   A  ++  M     +  +
Sbjct: 107 LRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSI 166

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
               +LI  LCK  +  EA      ++Q+G   ++V Y           + + A  LF++
Sbjct: 167 VVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG---------KFNEAELLFKE 217

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G C + + Y+I+I   C+   +  A    ++M    +  +V  YN LING+CK GN
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGN 277

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
              A      M++K   +P V+TYT+LI G C  G    A  ++NEM  KG +PN  TF 
Sbjct: 278 ASAAKYYFDEMIDK-GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFT 336

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           A+I+GLC+ +    A+  F  MKE+ + P    +  +I       N   AF +L EM
Sbjct: 337 AIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 166/397 (41%), Gaps = 28/397 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           +SP    F  +I  L    ++ EA  LF ++K   + +P+  +YN ++E  C+S ++   
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI-MPSEVTYNVMIEGHCRSGNISEA 386

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVA 144
              L EM   G+  D YT  PL+   C+ G+  +A    +++  DH  ++   +S L+  
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + K G    A      M +  + ++   + +LI G  ++        L  +M   G   D
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVK 261
           A +Y  +I    K   L+ A  L+  M   G  P+    + LI      G   +  LL K
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566

Query: 262 E-IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM------ 314
           E +  D   N +T  C   +  L   G++++A  L  AM+KG     V   +L+      
Sbjct: 567 ETLVSDVTPNHITYGC--FLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRL 624

Query: 315 ------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                       +    + P+  ++  II    K   L  A+ L+  M   G   +   Y
Sbjct: 625 GKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAY 684

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           + L+ G C +  LE+++EL  EM   G +  H T  S
Sbjct: 685 SFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 222/455 (48%), Gaps = 35/455 (7%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           D   Y+ II GL K   ++ A   Y EM    ++PD    + +I + S         K  
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALS---------KAQ 60

Query: 264 WEDRDVNTMTLLC-------NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             DR +  +T++        NSIM    S+G  ++A  + + M         G+E     
Sbjct: 61  AMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD------GIE----- 109

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++ +++ L K+GK   A  +F  M + G   ++  Y  L+ G  +   L 
Sbjct: 110 -----PDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALV 164

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHEPWVKHNTLL 435
           E ++LL  M ++G +  H   N +  C   +Q+ V  + LV  KMR QG  P   +   +
Sbjct: 165 EMHDLLALMVQNGMQLDHHVFNILI-CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTV 223

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G+  +A      M+ +G  P++V Y++ I  L    + + A EL  +I   G 
Sbjct: 224 IDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGI 283

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P++V +N I+  LCK  RV E++ LF+ +   G+ P V TY+ LI+G+C +G +D AM 
Sbjct: 284 NPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMK 343

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L+ M+      PD +TY+TLI+G C   R +DA+ L+ EME  G  P+ IT+  ++ GL
Sbjct: 344 LLTGMVSV-GLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +  R  AA   +  + E G + ++  +  ++  F
Sbjct: 403 FRTRRTAAAKELYARITESGTQLELSTYNIILMDF 437



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 221/440 (50%), Gaps = 25/440 (5%)

Query: 115 GQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
           G  DKA   ++E++D     + V ++ ++ A SK   +D+A E++  M    +  N  T+
Sbjct: 25  GDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPNCFTY 80

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
             ++HG+    + +KA+ +F KM   G   D   Y+ ++  LCKN +   A +++  M  
Sbjct: 81  NSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVK 140

Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG-SIDQ- 291
            G+ PD      L+   + +G L  +                 + ++ ++V NG  +D  
Sbjct: 141 RGLKPDITTYGTLLHGYASKGALVEM-----------------HDLLALMVQNGMQLDHH 183

Query: 292 AYNLLQ-AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            +N+L  A  K E + +V +    + +  ++PN  ++  +I+ L K G+LD A+  F +M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   NV +Y +LI  LC  ++ E++ EL+ E+ + G  P     N++   LC+   V
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
           + +  L   +   G  P V   + LI   C  GK   A + LT MV  G  PD V YS  
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G   I R++ AL LF+++ ++G  PD++ YNII+ GL + +R A A++L+  +   G 
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGT 423

Query: 531 IPSVATYNLLINGWCKSGNI 550
              ++TYN+++  + K+ ++
Sbjct: 424 QLELSTYNIILMDFAKTNSL 443



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 161/333 (48%), Gaps = 5/333 (1%)

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G   P+  S++ II+ L K+G +D A   + EM       +   YN++I  L  +  ++ 
Sbjct: 5   GRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDR 64

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + E+L  M      P  FT NS+    C       A+ + RKM   G EP V     L+ 
Sbjct: 65  AMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK+GK  EA +    MV+ G  PDI  Y   + G      +    +L   +  +G   
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D   +NI+I    K ++V E   +F++M  +GL P+   Y  +I+G CK G +D AML  
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +M++K   +P+V+ YT+LI  LC   + + A  L  E+ ++G  PN + F  ++  LCK
Sbjct: 241 EQMIDK-GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCK 299

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
             R   +   F ++   G+ PD+  +  LI  +
Sbjct: 300 EGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 180/392 (45%), Gaps = 19/392 (4%)

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           + +PN ++YN ++   C S   +      ++M   G   D  T   L+   C +G+  +A
Sbjct: 72  MVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEA 131

Query: 121 LSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             +F+ ++  G   D   +  LL  ++  G + +  +L+  M    ++L+   F +LI  
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K+ +VD+ + +F KM + G   +A  Y  +I GLCK  +L+ A+  + +M   G+TP+
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPN 251

Query: 240 FEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
             + + LI +     +     + I+E  D+ +N   +  N+I+  L   G + ++  L  
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF- 310

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                + +  +GV          +P+  ++  +I+     GK+D A+ L   M  +G   
Sbjct: 311 -----DLLGHIGV----------NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKP 355

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   Y+ LI+G C  NR+E++  L +EME +G  P   T N +   L R +    A  L 
Sbjct: 356 DSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELY 415

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            ++   G +  +    +++ +  K    M  F
Sbjct: 416 ARITESGTQLELSTYNIILMDFAKTNSLMMHF 447



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 13/196 (6%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+V Y+  I GL     VD A   + ++      PD V YN II+ L KAQ    A D 
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ----AMDR 64

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
             E++T  ++P+  TYN +++G+C SG  ++A+    +M   +   PDV+TY +L+D LC
Sbjct: 65  AMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCS-DGIEPDVVTYNSLMDYLC 123

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR----MMKEKGMK 637
             G+  +A  +++ M ++G  P+  T+  L+ G       + ALV       +M + GM+
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYAS----KGALVEMHDLLALMVQNGMQ 179

Query: 638 PDMFVFVALISAFLSE 653
            D  VF  LI A+  +
Sbjct: 180 LDHHVFNILICAYTKQ 195



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 89/159 (55%), Gaps = 5/159 (3%)

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C PDVV+YN II GL K   V +A   ++EM+ + + P   TYN +I    K+  +D+AM
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L+ M+      P+  TY +++ G C +G+ + AI ++ +M   G  P+ +T+ +L+  
Sbjct: 67  EVLTVMV-----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           LCK  +   A   F  M ++G+KPD+  +  L+  + S+
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASK 160


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 167/326 (51%), Gaps = 3/326 (0%)

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
           + L  F+EM + GC+ NV  YN +IDG C   R +E++  LR M   G +P   T N + 
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             LCR   +     ++ +M  +G+ P  V +NTL +   CK G   +A     +MV+ G 
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTL-VNGYCKEGNFHQALVLHAEMVRNGL 119

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P++V Y++ I  +     ++ A+E F  +   G CP+   Y  II+G  +   + EA  
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           + NEM   G IPS+ TYN LING C  G +++A+  L  M+ K    PDV++Y+T+I G 
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK-GVLPDVVSYSTIISGF 238

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
                 D A  +  EM  K   P+ +T+ +LI GLC+  R   A   F+ M    + PD 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
           F +  LI+A+  E +   A  +  EM
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEM 324



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 165/311 (53%), Gaps = 2/311 (0%)

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
           M  KG + PN  +F++IIN L +DG+L     +  EM++ G + +   YN L++G C   
Sbjct: 44  MGLKG-LEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEG 102

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
              ++  L  EM  +G  P   T  S+   +C+  ++  A+    +M V+G  P  +  T
Sbjct: 103 NFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYT 162

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I    + G   EA+R L +M + GF+P IV Y+A I G   + R++ A+ L +D+   
Sbjct: 163 TIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK 222

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PDVV+Y+ IISG  + Q +  A  +  EMI K ++P   TY+ LI G C+   + +A
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 ML  +   PD  TYTTLI+  C  G  + A+ L +EM +KG  P+ +T+  LI 
Sbjct: 283 CDMFQEMLTIKL-PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLIN 341

Query: 614 GLCKCDRPRAA 624
           GL K  R + A
Sbjct: 342 GLNKQARSKEA 352



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 216/500 (43%), Gaps = 65/500 (13%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  T+  +I G+ K  R D+A      M   G   +   +++II GLC++ +L+   ++ 
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
            EM   G  PD    + L+     EG                                  
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEG---------------------------------- 102

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
                N  QA++       +  EM+   +  +SPN  ++  +IN++ K G L+ A+  F 
Sbjct: 103 -----NFHQALV-------LHAEMV---RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFD 147

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +M   G   N   Y  +I+G      L+E+Y +L EM  SGF P+  T N++    C   
Sbjct: 148 QMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLG 207

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A+ L++ M  +G  P V   + +I    ++ +   AF+   +M+ +  LPD V YS
Sbjct: 208 RMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYS 267

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           + I GL + +R+  A ++F+++      PD   Y  +I+  CK   + +A  L +EMI K
Sbjct: 268 SLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK 327

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID---------- 578
           G +P   TYN+LING  K     +A   L ++   +S  P  +TY TLI+          
Sbjct: 328 GFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS-IPSAVTYNTLIENCCNIEFKSA 386

Query: 579 -----GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
                G C+ G  D+A  ++  M  K   PN   +  +I G C+      A   ++ M  
Sbjct: 387 VALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVH 446

Query: 634 KGMKPDMFVFVALISAFLSE 653
               P     +AL+ A  +E
Sbjct: 447 VDFVPHTVTVLALVKALFTE 466



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 213/484 (44%), Gaps = 37/484 (7%)

Query: 120 ALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            L  F E+  +G +   V ++ ++  + K    D+A   +  M    +  N  TF ++I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G  +  R+ +  ++  +M++ G+  D   Y+ ++ G CK      AL L++EM  +G++P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNL 295
           +    + LI S    G L   + E ++   V  +        +I+      G +D+AY +
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAM-EFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  M +   I                P+  +++ +IN     G+++ A+ L ++M   G 
Sbjct: 181 LNEMTRSGFI----------------PSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + +V  Y+ +I G   +  L+ ++++  EM      P   T +S+ + LC ++ +  A +
Sbjct: 225 LPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACD 284

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           + ++M      P     T LI   CK G   +A     +M+Q+GFLPD V Y+  I GL 
Sbjct: 285 MFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLN 344

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIII---------------SGLCKAQRVAEAED 520
              R   A  L   +      P  V YN +I                G C    + EA+ 
Sbjct: 345 KQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQ 404

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           +F  MI K   P+ A YN++I+G C+ GN+ +A      M+  +   P  +T   L+  L
Sbjct: 405 VFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDF-VPHTVTVLALVKAL 463

Query: 581 CIAG 584
              G
Sbjct: 464 FTEG 467



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 226/492 (45%), Gaps = 36/492 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  ++N ++  LC+   +      L EM   G+  D+ T   L+  YC  G F +AL +
Sbjct: 51  PNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             E++ +G     V ++ L+ +  K G +++A E  ++M    +  NE+T+  +I+GF +
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +  +D+A ++ ++MT+SGF      Y+ +I G C   ++E A+ L  +M G G+ PD   
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVN-TMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            S +I+  +   EL         DR     + ++  S++   V+  S+ Q     + + +
Sbjct: 231 YSTIISGFARNQEL---------DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTE 281

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                D+  EML I    + P+  ++  +IN   K+G L+ AL L  EM Q G + +   
Sbjct: 282 A---CDMFQEMLTI---KLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVT 335

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+GL    R +E+  LL ++      P+  T N++    C  +    A+ LV+   
Sbjct: 336 YNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIE-FKSAVALVKGFC 394

Query: 422 VQG----------------HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++G                H+P      ++I   C+ G  ++A++   +MV   F+P  V
Sbjct: 395 MKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTV 454

Query: 466 CYSAAIGGLIDIKRVDLAL-ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
              A +  L   + +D  L E+  DI       D     +++    K   +    +L  E
Sbjct: 455 TVLALVKALF-TEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTE 513

Query: 525 MITKGLIPSVAT 536
           M   GLIPS  T
Sbjct: 514 MAKDGLIPSTGT 525


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 157/634 (24%), Positives = 289/634 (45%), Gaps = 49/634 (7%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALC 77
           +D VK R          L++   + G+++EA N LF Q+KR G  +P+ +++N L+  L 
Sbjct: 153 EDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALF-QIKRRGF-LPHIFTFNYLMNKLI 210

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEH 136
            +  VD      K+++  G   + YT + +++ +C  G   +A +VF E+   G + + +
Sbjct: 211 ANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAY 270

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++  +         D   ++++   + NI ++   +  +I GF  + ++D+A  +   M
Sbjct: 271 AYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDM 330

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            K    SDA  Y  +I G CK   L  AL L+++M+  GI  +  I+S ++    ++G  
Sbjct: 331 EKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMH 390

Query: 257 TLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI--------- 305
           + +V+E    +D+      +  N ++  L     +DQA  LL  M KG+ +         
Sbjct: 391 SQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEM-KGKQMDMDIMHYTT 449

Query: 306 -----ADVG--VEMLMIF-----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
                  VG  V+   +F     KG + P+  +F+I++    + G  + AL L+  M   
Sbjct: 450 LINGYCHVGKLVDAFRVFEEMEGKG-LEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQ 508

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
               N   +N +I+GLC   ++ E+      ME+           +M    C  +    A
Sbjct: 509 DLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKA 564

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L  ++  +G      +   L+++LC+ G+   A   L  M+     P    Y   I  
Sbjct: 565 SELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITA 624

Query: 474 LI---DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
                D++  +   ++ R     G  PD+  Y  +I+  C+  R++EA +LF +M  +G+
Sbjct: 625 CYRAGDMRNAEAVFDILR---KSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGI 681

Query: 531 IPSVATYNLLINGWCKS----------GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            P + T+ +L++G  K             ++ A   + + ++     PDVI YT LIDG 
Sbjct: 682 KPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGH 741

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
           C   R +DAI L++EM  +G  P+R T  AL++G
Sbjct: 742 CKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSG 775



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 233/544 (42%), Gaps = 57/544 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDC 164
           L++ Y  +G  D+A++   +I   G++  H+F+   L+      G+VD A  + +++   
Sbjct: 170 LVKSYVTAGMLDEAINALFQIKRRGFL-PHIFTFNYLMNKLIANGKVDAALAIYKQLKSL 228

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  N+ T+ ++I  F +K  + +A  +F +M   G   +A  Y   I GLC N++ +  
Sbjct: 229 GLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFG 288

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
            Q                                 V + W++ ++        +++R   
Sbjct: 289 YQ---------------------------------VLQAWKEGNIPIDVYAYVAVIRGFC 315

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +   +D+A  +L  M K E I+D                   +  +I    K G L  AL
Sbjct: 316 NEMKMDRAEVVLGDMEKQELISDA----------------RCYSELIRGYCKAGDLSKAL 359

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           +L  +M   G   N  + + ++   C      +  E  +  ++        + N +   L
Sbjct: 360 ALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDAL 419

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+ + V  A+ L+ +M+ +  +  + H T LI   C  GK ++AFR   +M  +G  PD+
Sbjct: 420 CKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDV 479

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V ++  +         + AL+L+  + +    P+ + +N++I GLC   +V EAE  F  
Sbjct: 480 VTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCN 539

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M  K    S+  Y  +I G+C++ + ++A      + E+         Y  L++ LC  G
Sbjct: 540 MEDK----SIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIY-KLLEKLCEEG 594

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D A+ L   M +    P++  +  +IT   +    R A   F ++++ G+ PD+F + 
Sbjct: 595 EKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYT 654

Query: 645 ALIS 648
            +I+
Sbjct: 655 TMIN 658



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 169/360 (46%), Gaps = 38/360 (10%)

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +D ++ + +  G LD A++   ++ + G + ++F +N L++ L  + +++ +  + ++++
Sbjct: 167 YDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLK 226

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P  +T + + +  CR+  +V A N+ ++M + G  P     T  I+ LC + ++ 
Sbjct: 227 SLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSD 286

Query: 447 EAFRFLTDMVQEGFLP-DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             ++ L    +EG +P D+  Y A I G  +  ++D A  +  D+       D   Y+ +
Sbjct: 287 FGYQVLQAW-KEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSEL 345

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSV------------------------------- 534
           I G CKA  +++A  L N+M +KG+  +                                
Sbjct: 346 IRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRI 405

Query: 535 ----ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
                +YN++++  CK   +DQA+  L  M  K+    D++ YTTLI+G C  G+  DA 
Sbjct: 406 FLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQM-DMDIMHYTTLINGYCHVGKLVDAF 464

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++ EME KG  P+ +TF  L+    +      AL  +  MK + +KP+      +I   
Sbjct: 465 RVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGL 524



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 186/432 (43%), Gaps = 70/432 (16%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N +M  L++NG +D A  + + +        +G+          +PN  ++ III    +
Sbjct: 203 NYLMNKLIANGKVDAALAIYKQL------KSLGL----------NPNDYTYSIIIKAFCR 246

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR------------- 383
            G L  A ++F+EM   G + N + Y   I+GLC + R +  Y++L+             
Sbjct: 247 KGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYA 306

Query: 384 ----------------------EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
                                 +ME+          + + R  C+  D+  AL L   M 
Sbjct: 307 YVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDME 366

Query: 422 VQGHEPWVKHNTLLIKELCK-------HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +G    +K N +++  + +       H + +E F+   D+       D V Y+  +  L
Sbjct: 367 SKG----IKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDL---RIFLDEVSYNIVVDAL 419

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
             +++VD A+ L  ++       D++ Y  +I+G C   ++ +A  +F EM  KGL P V
Sbjct: 420 CKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDV 479

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            T+N+L+  + + G  ++A L L   ++ +   P+ IT+  +I+GLCI G+  +A   + 
Sbjct: 480 VTFNILLAAFSRRGLANEA-LKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFC 538

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
            ME+K        + A+ITG C+      A   F  + E+G+  D      L+     E 
Sbjct: 539 NMEDKSID----NYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEG 594

Query: 655 NPPLAFEVLKEM 666
               A  +LK M
Sbjct: 595 EKDRALWLLKTM 606



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 122/319 (38%), Gaps = 79/319 (24%)

Query: 426 EPWVKHNT--------LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           E  VKH +         L+K     G   EA   L  + + GFLP I  ++  +  LI  
Sbjct: 153 EDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIAN 212

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
            +VD AL +++ + + G  P+   Y+III   C+   + EA ++F EM   G+IP+   Y
Sbjct: 213 GKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAY 272

Query: 538 NLLINGWC---------------KSGNI--------------------DQAMLCLSRMLE 562
              I G C               K GNI                    D+A + L  M E
Sbjct: 273 TTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDM-E 331

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN------------------ 604
           K+    D   Y+ LI G C AG    A+ L N+ME KG   N                  
Sbjct: 332 KQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHS 391

Query: 605 -----------------RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                             +++  ++  LCK ++   A+     MK K M  D+  +  LI
Sbjct: 392 QVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLI 451

Query: 648 SAFLSELNPPLAFEVLKEM 666
           + +        AF V +EM
Sbjct: 452 NGYCHVGKLVDAFRVFEEM 470



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 21/326 (6%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P  + F  L+      GL  EA  L++ +K + L  PN  ++N ++E LC    V   
Sbjct: 475 LEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDL-KPNAITHNVMIEGLCIGGKVTEA 533

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
           E     M+D     D Y    ++  YC +   +KA  +F E+ + G + D      LL  
Sbjct: 534 EAFFCNMED--KSIDNYG--AMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEK 589

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             + GE D+A  L++ M D N+  ++  +  +I    +   +  A  +FD + KSG   D
Sbjct: 590 LCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPD 649

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +I   C+  +L  A  L+ +MK  GI PD    + L+     +G L  +  E +
Sbjct: 650 IFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLL-----DGHLKRVHSEAF 704

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-----VGVEMLMIFKGT 319
             R    + L  ++I + +  N  I        A+I G    D     +G+   M+++G 
Sbjct: 705 A-RKRKEVNLAASNIWKEM-QNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRG- 761

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALS 345
           V P+ ++   +++     G +D+ L+
Sbjct: 762 VEPDRATCTALLSGCRNRGDVDMVLT 787



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 2/188 (1%)

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            +D+ LE   D   H     +  Y+ ++     A  + EA +   ++  +G +P + T+N
Sbjct: 145 HIDIDLEK-EDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFN 203

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L+N    +G +D A L + + L+    +P+  TY+ +I   C  G   +A  ++ EME 
Sbjct: 204 YLMNKLIANGKVDAA-LAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMEL 262

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            G  PN   +   I GLC   R        +  KE  +  D++ +VA+I  F +E+    
Sbjct: 263 CGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDR 322

Query: 659 AFEVLKEM 666
           A  VL +M
Sbjct: 323 AEVVLGDM 330


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 235/546 (43%), Gaps = 53/546 (9%)

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++ M +   RL+   +  L+    K +    A  ++ +M   GF      Y  ++  LCK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLI-TSC--SDEGELTLLVKEIWEDRDVNTMTL 274
           N  ++ A     ++   G   D  + + L+  +C   D GE   + +++ ++      ++
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             + ++  L   G +++A+ L Q M++               KG   P+T ++ ++I   
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVE---------------KG-CQPSTRTYTVLIKAK 244

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G  D A+ +  EM    C+ NV  Y  LID LC   ++EE+  + R+M + G  P  
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N++    C+   VV A  L+  M     +P ++    L++ LC+  K+ +AF  L  
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 364

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +V  G LPD V Y+  + G     ++++A  +F  + + G  PD   +  +I GLCK  R
Sbjct: 365 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 424

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE------------ 562
           + +A  +   M+ KG+     T+  LI+G CK G           M+E            
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 484

Query: 563 ----------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
                                 K    P V+T+T LI+G C AG    ++ +   M++ G
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
           C+PN  T+  +I GLC   R   A      M   G+ P+ F +  L+ A +       AF
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604

Query: 661 EVLKEM 666
           +++  M
Sbjct: 605 QIVSTM 610



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 242/557 (43%), Gaps = 65/557 (11%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           +S LL+  +K      A  +  RM +    L    +  +++   K   V  A     K+ 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 198 KSGFASD------------------------------------AAMYDVIIGGLCKNKQL 221
           + GF  D                                    +  Y ++I GLC+  +L
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLL 275
           E A QL  EM   G  P     + LI +  D G     +K + E        +V+T T+L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + + R     G I++A  + + M+                K  + P   +F+ +IN   
Sbjct: 276 IDRLCR----EGKIEEANGVFRKML----------------KHGLCPGIITFNALINGYC 315

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G +  A  L   M +  C  N+  YN L++GLC  ++  +++ LLR + ++G  P   
Sbjct: 316 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 375

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +    C+   +  A N+   M   G EP     T LI  LCK G+  +A   L  M
Sbjct: 376 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 435

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V++G   D V ++A I G   I +      LF ++  + C      +N  +  L K  ++
Sbjct: 436 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 495

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYT 574
            EA  +  +M+  GL+PSV T+ +LI G C++G    ++  L RM  K++G SP+V TYT
Sbjct: 496 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM--KQAGCSPNVYTYT 553

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            +I+GLC  GR ++A  +   M   G +PN  T+  L+    K  R   A      M + 
Sbjct: 554 IIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 613

Query: 635 GMKPDMFVFVALISAFL 651
           G +P+  ++ AL+S F+
Sbjct: 614 GCQPNSHIYSALLSGFV 630



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 247/551 (44%), Gaps = 20/551 (3%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+ CL  + +   A +++ ++  EG  V     Y  ++ ALCK+  V   EM   ++   
Sbjct: 99  LLMCLAKLNMGFVAFLVYRRMVNEGF-VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRL 157

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH--VFSILLVAFSKWGEVDK 153
           G+G D +  T L+   C      +A  VF ++        +   +SIL+    + G +++
Sbjct: 158 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEE 217

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L + M +   + + +T+ VLI         DKA+++ D+M       +   Y ++I 
Sbjct: 218 AFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 277

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LC+  ++E A  ++ +M   G+ P     + LI     EG         W    V+   
Sbjct: 278 RLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG---------WV---VSAFQ 325

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           LL  S+M       +I     L++ + +        + +  +    + P+  +++I+++ 
Sbjct: 326 LL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 383

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K+G+L++A ++F  M   G   + F +  LIDGLC   RLE++  +L  M + G    
Sbjct: 384 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 443

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN-TLLIKELCKHGKAMEAFRFL 452
             T  ++    C+         L   M V+       H     +  L K  K  EA   L
Sbjct: 444 EVTFTALIDGHCKIGKAKDVCFLFENM-VENRCLTTAHTFNCFLDALGKDYKLNEANAML 502

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             M++ G +P +V ++  I G        L+L++   +   GC P+V  Y III+GLC  
Sbjct: 503 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 562

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            RV EAE +   M + G+ P+  TY +L+    K+G +D+A   +S M+ K    P+   
Sbjct: 563 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV-KNGCQPNSHI 621

Query: 573 YTTLIDGLCIA 583
           Y+ L+ G  ++
Sbjct: 622 YSALLSGFVLS 632



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 278/663 (41%), Gaps = 76/663 (11%)

Query: 4   ILSRARRI---APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +L+  RR       RV  +   +  C  +      LI  L   G +EEA  L  ++  +G
Sbjct: 170 VLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 229

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+  +Y  L++A C     D     L EM       + +T T L+   C  G+ ++A
Sbjct: 230 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             VF +++ HG     + F+ L+  + K G V  A +L+  M+  N + N +T+  L+ G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
             + S+  KA  L  ++  +G   D   Y++++ G CK  QL MA  +++ M  +G+ PD
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408

Query: 240 FEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNTMTLLCNSIMRI--------- 282
               + LI      G L        +++ K I  D    T T L +   +I         
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE--VTFTALIDGHCKIGKAKDVCFL 466

Query: 283 ---LVSNGSIDQAYNL---LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
              +V N  +  A+     L A+ K   + +    +  + K  + P+  +  I+I    +
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+  L+L +   M Q GC  NV+ Y  +I+GLCN+ R+EE+  +L  M   G  P HFT
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM--EAFRFLTD 454
              + +   +   +  A  +V  M   G +P     + L+        A+   A     D
Sbjct: 587 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD 646

Query: 455 MVQEGFLP---DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +          D  C S+ +  L+D   VD AL++  +I   G  P    YN ++ GLCK
Sbjct: 647 LDARSLSSEENDNNCLSSHVFRLMD---VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCK 702

Query: 512 AQRVAEAEDLFNEMITKGL----------------------------------IPSVATY 537
             R+ EA+ L  +M+  GL                                  +PS A+Y
Sbjct: 703 EGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASY 762

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR--PDDAIMLWNE 595
             +I+G    G + +A   +S ++ + +G  + +  T  I+ L       PD  + L   
Sbjct: 763 CWVIHGLRNEGRVQEAQKLVSDLV-RHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKA 821

Query: 596 MEE 598
           +E+
Sbjct: 822 IEQ 824



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 147/642 (22%), Positives = 270/642 (42%), Gaps = 86/642 (13%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA  +F+++ +E  C PN+ +Y+ L+  LC++  ++      +EM + G      T T L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           ++  C+ G  DKA+ + +E+     V + H ++IL+    + G++++A  +  +M    +
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
                TF  LI+G+ K+  V  A QL   M K     +   Y+ ++ GLC+  +   A  
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L   +  +G+ PD    + L+     EG+L +                            
Sbjct: 361 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM---------------------------- 392

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                A+N+  +M         G+E          P+  +F  +I+ L K G+L+ A  +
Sbjct: 393 -----AFNIFNSM------NSAGLE----------PDGFTFTALIDGLCKLGRLEQANGI 431

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M + G   +   +  LIDG C   + ++   L   M E+    T  T N     L +
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              +  A  ++ KM   G  P V  +T+LI+  C+ G+   + + L  M Q G  P++  
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYT 551

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y+  I GL +  RV+ A  +   + + G  P+   Y +++    KA R+  A  + + M+
Sbjct: 552 YTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMV 611

Query: 527 TKGLIPSVATYNLLINGW------------CKSGNIDQAML--------CLS----RMLE 562
             G  P+   Y+ L++G+              +G++D   L        CLS    R+++
Sbjct: 612 KNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMD 671

Query: 563 -----------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                      K+ G P    Y  L+ GLC  GR  +A  L  +M + G  P++    ++
Sbjct: 672 VDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSI 730

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           I   CK  +    L   +++ +    P    +  +I    +E
Sbjct: 731 IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNE 772


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 239/532 (44%), Gaps = 51/532 (9%)

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE 156
           G   Y    +L+   +  + D A+ +F  +         + FS LL A +K  + D    
Sbjct: 40  GKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS 99

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
             E+M+   I  N  T+ +LI+ F + SR+  AL L  KM K G+  D    + ++ G C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
              ++  A+ L  +M   G  PD    + LI                             
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG--------------------------- 192

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
                 L  +    +A  L+  M++               +G   P+  ++  ++N L K
Sbjct: 193 ------LFLHNKASEAVALIDRMVQ---------------RG-CQPDLVTYGAVVNGLCK 230

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G  DLAL+L  +M       NV +Y+ +ID LC     +++  L  EME  G +P   T
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            +S+  CLC       A  L+  M  +   P +   + LI    K GK ++A +   +M+
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +    P+I  YS+ I G   + R+  A ++   +    C P+VV YN +I+G CKA+RV 
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +  +LF EM  +GL+ +  TY  LI+G+ ++ + D A +   +M+      P+++TY  L
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNIL 469

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +DGLC  G+   A++++  ++     P+  T+  +I G+CK  + +   ++F
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 185/356 (51%), Gaps = 1/356 (0%)

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           +LL     G  I+D    +  + +    P+T +F  +I+ L    K   A++L   M Q 
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           GC  ++  Y  +++GLC     + +  LL +ME +  +      +++   LC+ +    A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           LNL  +M  +G  P V   + LI  LC +G+  +A R L+DM++    P++V +SA I  
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            +   ++  A +L+ ++      P++  Y+ +I+G C   R+ EA+ +   MI K  +P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
           V TYN LING+CK+  +D+ M  L R + +     + +TYTTLI G   A   D+A M++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGME-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +M   G  PN +T+  L+ GLCK  +   A+V F  ++   M+PD++ +  +I  
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 189/422 (44%), Gaps = 50/422 (11%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           ++R  +S+  +D A  L   M +  P                 P+   F  +++ + K  
Sbjct: 49  VLRTGLSDIELDDAIGLFGVMAQSRPF----------------PSIIEFSKLLSAIAKMN 92

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K DL +S   +M  +G   N++ YN LI+  C  +RL  +  LL +M + G++P   TLN
Sbjct: 93  KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+    C    +  A+ LV +M   G++P     T LI  L  H KA EA   +  MVQ 
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PD+V Y A + GL      DLAL L   + A     +VV Y+ +I  LCK +   +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE---------------- 562
            +LF EM  KG+ P+V TY+ LI+  C  G    A   LS M+E                
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332

Query: 563 ------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                             K S  P++ TY++LI+G C+  R  +A  +   M  K C PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T+  LI G CK  R    +  FR M ++G+  +   +  LI  F    +   A  V K
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452

Query: 665 EM 666
           +M
Sbjct: 453 QM 454



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 226/490 (46%), Gaps = 58/490 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   ++ LL A+ K    DLV    ++M+  G  ++ YT   L+  +C   +   AL++
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
             +++  G+  + V  + LL  F     +  A  L+++M +   + +  TF  LIHG   
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
            ++  +A+ L D+M + G   D   Y  ++ GLCK    ++AL L ++M+ + I  +  I
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 243 LSKLITSC----SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            S +I S      ++  L L  +   E++ V    +  +S++  L + G    A  LL  
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTE--MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MI+ +                ++PN  +F  +I+  +K GKL  A  L+ EM +     N
Sbjct: 314 MIERK----------------INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +F Y++LI+G C  +RL E+ ++L  M      P   T N++    C+ + V        
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV-------- 409

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
                                    K ME FR   +M Q G + + V Y+  I G    +
Sbjct: 410 ------------------------DKGMELFR---EMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
             D A  +F+ + + G  P+++ YNI++ GLCK  ++A+A  +F  +    + P + TYN
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502

Query: 539 LLINGWCKSG 548
           ++I G CK+G
Sbjct: 503 IMIEGMCKAG 512



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 16/329 (4%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
            EA  L D++ + G C P+  +Y  ++  LCK    DL    L +M+      +    + 
Sbjct: 200 SEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++   C     D AL++F E+ + G     + +S L+     +G    A  L+  M +  
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I  N  TF  LI  FVKK ++ KA +L+++M K     +   Y  +I G C   +L  A 
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           Q+   M      P+    + LI        +    K +   R+++   L+ N++    + 
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVD---KGMELFREMSQRGLVGNTVTYTTLI 435

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +G   QA +   A +  + +  VGV           PN  +++I+++ L K+GKL  A+ 
Sbjct: 436 HGFF-QARDCDNAQMVFKQMVSVGVH----------PNILTYNILLDGLCKNGKLAKAMV 484

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +F  + +     +++ YN +I+G+C + +
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 4/222 (1%)

Query: 36  LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           LI CL + G   +A+ +L D ++R+    PN  +++ L++A  K   +   E   +EM  
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERK--INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
                + +T + L+  +C   +  +A  +   +I    +   V ++ L+  F K   VDK
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             EL   M    +  N  T+  LIHGF +    D A  +F +M   G   +   Y++++ 
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           GLCKN +L  A+ ++  ++ S + PD    + +I      G+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 102/211 (48%), Gaps = 6/211 (2%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L  D+++ +  ++P  + F  LI      G + +A  L++++ +  +  PN ++Y+ L+ 
Sbjct: 310 LLSDMIERK--INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI-DPNIFTYSSLIN 366

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
             C    +   +  L+ M       +  T   L+  +C + + DK + +F E+   G V 
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             V ++ L+  F +  + D A  + ++M    +  N  T+ +L+ G  K  ++ KA+ +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           + + +S    D   Y+++I G+CK  + +M 
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 231/450 (51%), Gaps = 27/450 (6%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEI 263
           ++ I+  L K      A+ L+ +++ +GI P    L+ L+      G +T    +L K +
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
               + N++T    ++++ +  NG   QAY   +A++  + +   G ++          +
Sbjct: 73  KMGYEPNSITF--TTLIKGMCLNG---QAY---EALLFHDHVVAHGFKL----------D 114

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+ I++N L K G+   A+ + R+ T +    +V +Y+ +ID LC    + ++Y L  
Sbjct: 115 QVSYAILMNGLCKMGETRAAMQMLRK-TWVNA--DVVMYSTIIDSLCKGKFVTDAYRLYS 171

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM   G  P  +T + +   LC+ +    A+NL+  M  +G +P V     ++   C   
Sbjct: 172 EMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVN 231

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           +  +A      MVQEG  P++ CY+  I GL   KRVD A+ LF+++      PDVV YN
Sbjct: 232 QVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYN 291

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I GLCK  +++ + +L +EM + G    + TYN L++  CK+ ++DQA + L + ++ 
Sbjct: 292 ILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQA-ITLVKEIKD 350

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           +   P+V TYTTLIDGLC  GR +DA +++ E+  +G      T+  +I GLCK      
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           AL     M++    PD   +  +I A LSE
Sbjct: 411 ALALLSRMEDNACIPDAVSYETIIYA-LSE 439



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 214/451 (47%), Gaps = 24/451 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ +L +  K      A  L  +++   I+ +  T  +L++ +     +     +  K+ 
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEG 254
           K G+  ++  +  +I G+C N Q   AL  +  +   G   D   + IL   +    +  
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
               ++++ W + DV    ++ ++I+  L     +  AY L   MI              
Sbjct: 133 AAMQMLRKTWVNADV----VMYSTIIDSLCKGKFVTDAYRLYSEMIA------------- 175

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             KG + PN  +F I+++ L KD K   A++L   M + G   NV  Y  ++DG C  N+
Sbjct: 176 --KG-IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           + ++  +   M + G +P  +  N +   LC+++ V  A+NL ++M  +   P V    +
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK GK   +   + +M   G   DI+ Y++ +  L     +D A+ L ++I   G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P+V  Y  +I GLCK  R+ +A  +F E++T+G   +V TYN++ING CK G  D+A+
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 412

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             LSRM E  +  PD ++Y T+I  L   G 
Sbjct: 413 ALLSRM-EDNACIPDAVSYETIIYALSEKGE 442



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 158/600 (26%), Positives = 270/600 (45%), Gaps = 58/600 (9%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P    +N +L +L K           ++++  G      TLT L+  YC++G      S
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  +I+  G+    + F+ L+      G+  +A    + +     +L++ ++ +L++G  
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K      A+Q+   + K+   +D  MY  II  LCK K +  A +LYSEM   GI P+  
Sbjct: 127 KMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 242 ILSKLITS-CSD-EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             S L+ + C D +G+  + +  +   + V    +   +IM        +++A N+   M
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++       GVE          PN   ++IIIN L K  ++D A++LF+EM       +V
Sbjct: 244 VQE------GVE----------PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDV 287

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             YN LIDGLC   ++  S EL+ EM   G      T NS+   LC+   +  A+ LV++
Sbjct: 288 VTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKE 347

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           ++ QG +P V   T LI  LCK G+  +A+    +++ EG+   +  Y+  I GL     
Sbjct: 348 IKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP------S 533
            D AL L   +  + C PD V+Y  II  L +     +   L   MI +GL        +
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVN 467

Query: 534 VATYNLLINGWCKSGNIDQAML---------CLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           + T   L + W    +++  M+         CLS    K SGS         ++G+ I G
Sbjct: 468 MTTIADLNDKWAAYASLEDGMIHPIFLMLLKCLSI---KCSGS---------MEGVDITG 515

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R +DAI    E  +K   P  IT  ++ +     DR    + H  ++++   +P   +++
Sbjct: 516 R-EDAI----EYAKKHNVPIPITKKSIYSR----DRNLWHINHGDVLEDSANEPKKDIYM 566



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 4/317 (1%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M QI     +  +N+++  L   N    +  L R++E +G KP+  TL  +  C C    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +    +++ K+   G+EP     T LIK +C +G+A EA  F   +V  GF  D V Y+ 
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + GL  +     A+++ R    +    DVV Y+ II  LCK + V +A  L++EMI KG
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+V T+++L++  CK     QAM  L+ M+ K+   P+V+TY  ++DG C+  + + A
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMM-KKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + ++N M ++G  PN   +  +I GLCK  R   A+  F+ M  K + PD+  +  LI  
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 650 FLSELNPPLAFEVLKEM 666
                    + E++ EM
Sbjct: 297 LCKLGKISTSLELVDEM 313



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 175/351 (49%), Gaps = 5/351 (1%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           F G + P+  +  I++N     G +    S+  ++ ++G   N   +  LI G+C + + 
Sbjct: 38  FNG-IKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQA 96

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+      +   GFK    +   +   LC+  +   A+ ++RK  V      V   + +
Sbjct: 97  YEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNAD---VVMYSTI 153

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK     +A+R  ++M+ +G  P++  +S  +  L   ++   A+ L   +   G 
Sbjct: 154 IDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGV 213

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  I+ G C   +V +A ++FN M+ +G+ P+V  YN++ING CK   +D+AM 
Sbjct: 214 KPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMN 273

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               M  K+  +PDV+TY  LIDGLC  G+   ++ L +EM   G   + IT+ +L+  L
Sbjct: 274 LFKEMHWKKI-NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHAL 332

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK      A+   + +K++G++P++  +  LI     +     A+ + +E+
Sbjct: 333 CKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEI 383


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 237/528 (44%), Gaps = 24/528 (4%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
           EMQ++G       L  ++ V    G  D A  VF+E++D   V D   + +++V + + G
Sbjct: 183 EMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMG 242

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +      ++ M +    ++  T  ++I  F +K  V++A   F K  + G   +   + 
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCK   ++ A ++  EM   G  P+    + LI           L K+ W ++  
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDG---------LCKKGWTEKAF 353

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                     ++++ S+      Y    ++    K E +    + ++ + +  + PNT++
Sbjct: 354 RLF-------LKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNT 406

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  +I+   K G    A  L   M + G   N+F YN +IDGLC   R  E+Y+LLR   
Sbjct: 407 YTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGL 466

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           +SG      T   +    CR+ D   AL +  +M   G +P +    +LI   C+  K  
Sbjct: 467 KSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVE 526

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           E+ +   + V  G LP    Y++ I G      +  A++ F  +  +GC PD + Y  +I
Sbjct: 527 ESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALI 586

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           SGLC   ++ EA  L+  MI  GL P   T   L   +CK G+   AM+ L R LEK+  
Sbjct: 587 SGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILER-LEKKLW 645

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
              + T  TLI  LC   +   A + ++++ +K    +RIT  A  T 
Sbjct: 646 ---IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTA 690



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 232/534 (43%), Gaps = 57/534 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V   ++ +FS+ G++ +A  ++  M +  + L  +    +I   +    VD A ++FD+M
Sbjct: 160 VMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEM 219

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
                  D+  Y +++ G C+  ++    +   +M   G   D    + +I++ S++G  
Sbjct: 220 LDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG-- 277

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             + +  W  +    M L                                          
Sbjct: 278 -FVNRAFWYFKKWVQMGL------------------------------------------ 294

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
               +PN  +F  +IN L K G +  A  +  EM + G   NV+ +  LIDGLC     E
Sbjct: 295 ----NPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTE 350

Query: 377 ESYEL-LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +++ L L+ +    +KP  +T   M    C+ + +  A  L+ +M+ QG  P     T L
Sbjct: 351 KAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   CK G    A+  +  M +EGF P+I  Y+A I GL    R   A +L R     G 
Sbjct: 411 IDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGL 470

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             D V Y I+IS  C+     +A  +F+ M   GL P + TYN+LI  +C+   ++++  
Sbjct: 471 HADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEES-- 528

Query: 556 CLSRMLEKESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
              ++ E+  G    P   TYT++I G C  G    AI  +++M + GC P+ IT+ ALI
Sbjct: 529 --EKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALI 586

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +GLC   +   A   +  M + G+ P     V L   +  + +   A  +L+ +
Sbjct: 587 SGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERL 640



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 185/374 (49%), Gaps = 8/374 (2%)

Query: 283 LVSNGSIDQAYNLLQAMIK-----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            ++N ++D+A  ++Q M++     G+    V + + M   G V       + +I+  L  
Sbjct: 148 FLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVL-KARILNFVIDVALAL 206

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +D A  +F EM     + +   Y  ++ G C   R+ +    L++M E G+   + T 
Sbjct: 207 GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATC 266

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             M      +  V  A    +K    G  P + + + LI  LCK G   +AF  L +MV+
Sbjct: 267 TLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR 326

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           +G+ P++  ++A I GL      + A  LF + + +    P+V  Y  +I+G CK +++ 
Sbjct: 327 KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE L   M  +GL+P+  TY  LI+G CK+GN  +A   L  ++ KE  +P++ TY  +
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYE-LMDLMGKEGFTPNIFTYNAI 445

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC  GR  +A  L     + G   +++T+  LI+  C+    + AL  F  M + G+
Sbjct: 446 IDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGL 505

Query: 637 KPDMFVFVALISAF 650
           +PDM  +  LI+ F
Sbjct: 506 QPDMHTYNVLIATF 519



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 216/520 (41%), Gaps = 60/520 (11%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           L F+I    ++G V+ A  +FD++    + VP++ SY  ++   C+   +  V+  LK+M
Sbjct: 196 LNFVIDVALALGFVDYAEKVFDEMLDRAV-VPDSTSYKLMVVGYCRMGRISDVDRWLKDM 254

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
            + G+  D  T T ++  +   G  ++A   F + +  G     + FS L+    K G +
Sbjct: 255 IERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSI 314

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDV 210
            +A E++E M     + N  T   LI G  KK   +KA +LF K+ +S  +  +   Y  
Sbjct: 315 KQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTC 374

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE-------LTLLVKEI 263
           +I G CK ++L  A  L   MK  G+ P+    + LI      G        + L+ KE 
Sbjct: 375 MINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEG 434

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
           +     N  T   N+I+  L   G   +AY LL+  +K    AD                
Sbjct: 435 FTP---NIFTY--NAIIDGLCKKGRFPEAYKLLRRGLKSGLHAD---------------- 473

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++ I+I+   +      AL++F  M ++G   ++  YN LI   C   ++EES +L  
Sbjct: 474 KVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFE 533

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           E    G  PT  T  SM    CR   +  A+    KMR  G +P       LI  LC   
Sbjct: 534 EAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNES 593

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV--- 500
           K  EA +    M+  G  P             ++ RV LA E     C  G     +   
Sbjct: 594 KLDEACQLYETMIDNGLSP------------CEVTRVTLAYEY----CKQGDSATAMIIL 637

Query: 501 ----------AYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
                       N +I  LC  ++V  A   F++++ K L
Sbjct: 638 ERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDL 677



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 208/471 (44%), Gaps = 32/471 (6%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R  RI+ +    +D+++    +       +I      G V  A   F +  + GL  PN 
Sbjct: 240 RMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLN-PNL 298

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +++ L+  LCK  S+      L+EM   GW  + YT T L+   C  G  +KA  +F +
Sbjct: 299 INFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK 358

Query: 127 II--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           ++  D+   + + ++ ++  + K  ++++A  L+ RM +  +  N  T+  LI G  K  
Sbjct: 359 LVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAG 418

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FE 241
              +A +L D M K GF  +   Y+ II GLCK  +   A +L      SG+  D   + 
Sbjct: 419 NFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYT 478

Query: 242 ILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           IL       +D  +   +   +++     D++T  +L  +  R       ++++  L + 
Sbjct: 479 ILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCR----QKKVEESEKLFEE 534

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                    VG+ +L        P   ++  +I    +DG +  A+  F +M   GC  +
Sbjct: 535 A--------VGLGLL--------PTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPD 578

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              Y  LI GLCN ++L+E+ +L   M ++G  P   T  ++    C++ D   A+ ++ 
Sbjct: 579 SITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILE 638

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           ++     + W++    LI++LC   K   A  F   ++ +    D +  +A
Sbjct: 639 RLE---KKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAA 686



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  +F ++ + GL  P+ ++YN L+   C+   V+  E   +E    G    K T T 
Sbjct: 491 KQALAIFSRMFKVGL-QPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTS 549

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  YC  G    A+  F+++ D+G   D   +  L+       ++D+AC+L E M D  
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNG 609

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +   E T   L + + K+     A+ + +++ K  +       + +I  LC  K++ +A 
Sbjct: 610 LSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTV---NTLIRKLCSEKKVGVAA 666

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
             + ++    +  D   L+   T+C +  +  L+
Sbjct: 667 LFFHKLLDKDLNVDRITLAAFTTACYESNKFALV 700


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 244/572 (42%), Gaps = 55/572 (9%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF-SKWGEVDKAC 155
           WG +        QV    G   +A  + ++++ +G V   V      AF S+     +  
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLV---VTVDSCNAFLSRIANNSEGI 242

Query: 156 EL-IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           E+ I+   +  I  N  ++ ++I+   +  +V +A +L  +M       D   Y  +I G
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   +L+ AL+L  +M+  G+ P                               N  T 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKP-------------------------------NRYTY 331

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+ +L   G   +A  +L+ M+  + I                P+   +  +I+  
Sbjct: 332 --NSIILLLCKIGKSFEAEKVLREMMSQKII----------------PDNVVYTTLIHGF 373

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A   F EM       +   Y  LI G     ++ E   L  EM   G KP  
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  ++    C+  ++V A +L  +M   G  P +     LI  LCKHG+   A   L +
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M ++G   ++  Y++ + G+     ++ A++L +++   G  PD + Y  +I   C+   
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A  L  EM+ +GL P+V T+N+L+NG+C  G ++     L  MLEK    PD ITY 
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK-GIVPDAITYN 612

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TL+   CI    +    ++  M  +G AP+  T+  LI G CK    + A   ++ M EK
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  P +  + ALI  F  +     A E+ +EM
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 246/576 (42%), Gaps = 60/576 (10%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P A     + L  +G + EA  L D++   GL V  + S N  L  +  +   + +EM 
Sbjct: 189 NPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVD-SCNAFLSRIANNS--EGIEMA 245

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           +K   +YG  ++  +                                  ++I++ +  + 
Sbjct: 246 IKVFCEYGISWNTTS----------------------------------YNIIIYSLCRL 271

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+V +A  L+ +MD  +   +  ++  +I G+     + KAL+L D M   G   +   Y
Sbjct: 272 GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY 331

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-- 266
           + II  LCK  +   A ++  EM    I PD  + + LI      G +    K  W D  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK--WFDEM 389

Query: 267 --RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
             + ++   +   ++++     G + +  NL   MI                +G + P+ 
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS---------------RG-LKPDE 433

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I+   K G++  A SL  EM Q+G   N+  Y  LIDGLC    L+ + ELL E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M + G +      NSM   +C+  ++  A+ L+++M V G +P     T +I   C+ G 
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A + L +M+  G  P +V ++  + G   +  ++    L   +   G  PD + YN 
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++   C    +     ++  M  +G+ P   TYN+LI G CK+ N+ +A      M+EK 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK- 672

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
              P V +Y  LI       +  +A  L+ EM   G
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 222/504 (44%), Gaps = 22/504 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   +I  L  +G V+EA+ L  Q+       P+  SY+ +++  C    +      + +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRS-STPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           MQ  G   ++YT   ++ + C  G+  +A  V  E++    + D  V++ L+  F K G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V  A +  + M    I  +  T+  LI GF +  +V +   LF +M   G   D   Y  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I   CK  ++  A  L++EM   G+TP+      LI      GEL    + + E R   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 271 TMTLLC--NSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSF 327
               +C  NS++  +   G+I+QA  L++ M + G                 + P+  ++
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG-----------------IDPDAITY 541

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+   + G +D A  L +EM   G    V  +N L++G C    LE+   LL  M E
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P   T N++ +  C R  +     + ++MR QG  P      +LIK  CK     E
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A+    +M+++G++P +  Y+A I      ++   A ELF ++  HG   D   YN  + 
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 508 GLCKAQRVAEAEDLFNEMITKGLI 531
              +   V    +L +E I K L+
Sbjct: 722 MCYEEGDVEITLNLCDEAIEKCLL 745


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 236/519 (45%), Gaps = 28/519 (5%)

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL-FD 194
           H ++IL+    +   +D     +  +     R+   TF  L+ G     R   A+ +   
Sbjct: 88  HTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM---KGSGITPDFEILSKLITSCS 251
           +MT+     D     +++ GLC   + + AL+L   M   +G G  PD    + +I    
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 252 DEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
            EG+         E  DR ++   +  +SI+  L    ++D+A  +L +M+K        
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKN------- 260

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN-----VFLYNN 364
                     V PN  ++  I++     G+   A+   +++   G   +     +  Y  
Sbjct: 261 ---------GVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           L+ G      L   + LL  M  +G  P H+  N +     ++  V  A+ +  KMR QG
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P       +I  LCK G+  +A  +   M+ EG  P  + Y++ I GL    + + A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
           EL  ++   G C + + +N II   CK  RV E+E LF+ M+  G+ P + TY+ LI+G+
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C +G +D+AM  LS M+      P+ +TY TLI+G C   R  DA++L+ EME  G +P+
Sbjct: 492 CLAGKMDEAMKLLSGMVSV-GLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
            IT+  ++ GL +  R  AA   +  + E G + ++  +
Sbjct: 551 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 589



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 225/506 (44%), Gaps = 36/506 (7%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY-SE 230
           T+ +LI    +  R+D        + K GF  +A  +  ++ GLC +K+   A+ +    
Sbjct: 89  TYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 231 MKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDR------DVNTMTLLCNSIMR 281
           M      PD    + L+    DE    E   L   + + R      DV + T + N   +
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
                G   +AY+    M+                   +SP+  ++  II  L K   +D
Sbjct: 209 ----EGDSGKAYSTYHEMLDRR----------------ISPDVVTYSSIIAALCKGQAMD 248

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-----EESGFKPTHFT 396
            A+ +   M + G M N   Y +++ G C+S + +E+   L+++     E  G +P   T
Sbjct: 249 KAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIAT 308

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++ +    +  +VG   L+  M   G  P      +LI    K GK  EA    + M 
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMR 368

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           Q+G  PD V Y A IG L    RV+ A+  F  +   G  P  + YN +I GLC   +  
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 428

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE+L  EM+ +G+  +   +N +I+  CK G + ++      M+ +    PD+ITY+TL
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV-RIGVKPDIITYSTL 487

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDG C+AG+ D+A+ L + M   G  PN +T+  LI G CK  R   ALV F+ M+  G+
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGV 547

Query: 637 KPDMFVFVALISAFLSELNPPLAFEV 662
            PD+  +  ++           A E+
Sbjct: 548 SPDIITYNIILQGLFQTRRTAAAKEL 573



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 263/589 (44%), Gaps = 50/589 (8%)

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           G   P  ++Y  L+   C++  +DL    L  +   G+  +  T TPLL+  C   +   
Sbjct: 81  GKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 120 ALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEK---TFC 174
           A+ +    +        VFS  ILL          +A EL   M D     +     ++ 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYT 200

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +I+GF K+    KA   + +M     + D   Y  II  LCK + ++ A+++ + M  +
Sbjct: 201 TVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKN 260

Query: 235 GITPDFEILSKLITSCSDEG---ELTLLVKEIWED--------RDVNTM-TLL------- 275
           G+ P+    + ++      G   E    +K++  D         D+ T  TLL       
Sbjct: 261 GVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKG 320

Query: 276 ----CNSIMRILVSNG--SIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTS 325
                ++++ ++V NG       YN+L      +   D   E +++F    +  ++P+  
Sbjct: 321 ALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVD---EAMLVFSKMRQQGLNPDAV 377

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I  L K G+++ A+  F +M   G      +YN+LI GLC  N+ E + EL+ EM
Sbjct: 378 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 437

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            + G        NS+    C+   V+ +  L   M   G +P +   + LI   C  GK 
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA + L+ MV  G  P+ V Y   I G   I R+  AL LF+++ + G  PD++ YNII
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM-----LCLSRM 560
           + GL + +R A A++L+  +   G    ++TYN++++G CK+   D A+     LCL  +
Sbjct: 558 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 617

Query: 561 -LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            LE         T+  +ID L   GR  +A  L+      G  PN  T+
Sbjct: 618 KLEAR-------TFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTY 659



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 224/503 (44%), Gaps = 58/503 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +Y+ ++ ALCK  ++D     L  M   G   +  T T ++  YC+SGQ  +A+  
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGF 288

Query: 124 FNEIIDHGW------VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
             ++   G        D   +  LL  ++  G +     L++ M    I  +   + +LI
Sbjct: 289 LKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI 348

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             + K+ +VD+A+ +F KM + G   DA  Y  +IG LCK+ ++E A+  + +M   G++
Sbjct: 349 CAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 408

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P                                   ++ NS++  L +    ++A  L+ 
Sbjct: 409 PG---------------------------------NIVYNSLIHGLCTCNKWERAEELIL 435

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+      D G+ +  IF          F+ II++  K+G++  +  LF  M +IG   
Sbjct: 436 EML------DRGICLNTIF----------FNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 479

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           ++  Y+ LIDG C + +++E+ +LL  M   G KP   T  ++    C+   +  AL L 
Sbjct: 480 DIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLF 539

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           ++M   G  P +    ++++ L +  +   A      + + G   ++  Y+  + GL   
Sbjct: 540 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 599

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           K  D AL +F+++C      +   +NI+I  L K  R  EA+DLF    + GL+P+  TY
Sbjct: 600 KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTY 659

Query: 538 NLLINGWCKSG---NIDQAMLCL 557
            L+       G    +DQ  L +
Sbjct: 660 RLMAENIIGQGLLEELDQLFLSM 682



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 192/427 (44%), Gaps = 24/427 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+EA ++F +++++GL  P+  +Y  ++  LCKS  V+   +  ++M D G       
Sbjct: 355 GKVDEAMLVFSKMRQQGLN-PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 413

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+   C   ++++A  +  E++D G  ++   F+ ++ +  K G V ++ +L + M 
Sbjct: 414 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 473

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              ++ +  T+  LI G+    ++D+A++L   M   G   +   Y  +I G CK  ++ 
Sbjct: 474 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG 533

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLLCNSI 279
            AL L+ EM+ SG++PD  I   +I     +   T   KE++    +          N I
Sbjct: 534 DALVLFKEMESSGVSPDI-ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L  N   D A  + Q +     + D+ +E              +F+I+I+ LLK G+
Sbjct: 593 LHGLCKNKLTDDALRMFQNLC----LMDLKLE------------ARTFNIMIDALLKVGR 636

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A  LF   +  G + N + Y  + + +     LEE  +L   ME++G       LN 
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 696

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           + R L +R ++  A   +  M  + H         L  +L   GK  E  RFL +  +  
Sbjct: 697 IVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKS- 754

Query: 460 FLPDIVC 466
           F+  + C
Sbjct: 755 FIESLSC 761



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 9/238 (3%)

Query: 436 IKELCKHGKAMEAFRFLTDMVQEG---FLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           + ++ +H  A    R+   M + G     P +  Y+  IG      R+DL      ++  
Sbjct: 57  LADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVK 115

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDL-FNEMITKGLIPSVATYNLLINGWCKSGNID 551
            G   + + +  ++ GLC  +R ++A D+    M     +P V +  +L+ G C   N  
Sbjct: 116 KGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDE-NRS 174

Query: 552 QAMLCLSRMLEKESG---SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           Q  L L  M+    G   +PDV++YTT+I+G    G    A   ++EM ++  +P+ +T+
Sbjct: 175 QEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTY 234

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++I  LCK      A+     M + G+ P+   + +++  + S   P  A   LK++
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 234/527 (44%), Gaps = 26/527 (4%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
           EM+ +G      T   +L+V   +G F  A  VF+ +   G   DE  F  L+V   + G
Sbjct: 136 EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREG 195

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +V++   L+  M      L+  T  V++    +K R     + F +M ++G   +   Y 
Sbjct: 196 KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 255

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             I GLCK + ++ A  +  EM G G+ P+    + LI           L K  W +R  
Sbjct: 256 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG---------LCKIGWTERAF 306

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE----PIADVGVEMLMIFKGTVSPNTS 325
                    +   L+ + S     +    MI G      +A   + ++ + +  + PNT+
Sbjct: 307 R--------LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I    K G  D A  L  +M Q G + N++ YN +IDG C   +++E+Y++LR  
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 418

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G K    T   +    C++  +  AL+L  +M   G  P ++  T LI   C+  + 
Sbjct: 419 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 478

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            E+ +F    +  G LP    Y++ I G   + R  LAL +F  +  +GC  D + Y  +
Sbjct: 479 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 538

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ISGLCK  R+ EA+ L+  M+ K L+P   T   L   +C+      A+  L R+ +++ 
Sbjct: 539 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ- 597

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               V T   ++  L   G  D A +   ++ ++  A +  T+   I
Sbjct: 598 ---QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 641



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 195/448 (43%), Gaps = 24/448 (5%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIM 280
           A +++  M  +G+ PD      L+  C  EG   E+  L+  +W     +     C  ++
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWR-YGFSLDNATCTVVV 223

Query: 281 RILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           R L   G         + M++ G P                 PN  ++   I+ L K   
Sbjct: 224 RSLCEKGRFKDVSEFFRRMLETGTP-----------------PNVVNYTAWIDGLCKRRY 266

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL-LREMEESGFKPTHFTLN 398
           +  A  +  EM   G   NV+ +  LIDGLC     E ++ L L+ ++ S +KP   T  
Sbjct: 267 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 326

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M    CR   +  A  L+ +M  QG +P     T LI   CK G    AF  +  M QE
Sbjct: 327 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 386

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GFLP+I  Y+A I G     ++  A ++ R   + G   D + Y I+I+  CK   +  A
Sbjct: 387 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 446

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            DLF+ M+  G  P +  Y  LI+ +C+   ++++     + L      P   TYT++I 
Sbjct: 447 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCL-MIGLLPTKQTYTSMIA 505

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  GR   A+ ++  M + GC  + IT+ ALI+GLCK  R   A   +  M +K + P
Sbjct: 506 GYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
                V L   +       +A  VL  +
Sbjct: 566 CEVTRVTLTFEYCRREKTSIAVSVLDRL 593



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 10/393 (2%)

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG-----VEMLMIFKGTVSP 322
           D+  +  L  +     V+ GS+  A+ +++ M+      + G      +M++  +    P
Sbjct: 86  DLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAA--FGEAGRLPEAADMVLEMRSHGLP 143

Query: 323 -NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
               + + ++   L+ G    A  +F  MT+ G   +   +  L+   C   ++EE   L
Sbjct: 144 LCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDAL 203

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L  M   GF   + T   + R LC +          R+M   G  P V + T  I  LCK
Sbjct: 204 LAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCK 263

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVV 500
                +AF  L +MV  G  P++  ++  I GL  I   + A  LF + I +    P+V 
Sbjct: 264 RRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVH 323

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y ++I G C+  ++A AE L   M+ +GL P+  TY  LI G CK G+ D+A   +++M
Sbjct: 324 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            ++E   P++ TY  +IDG C  G+  +A  +      +G   ++IT+  LIT  CK   
Sbjct: 384 -KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH 442

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              AL  F  M E G  PD+  + +LIS +  +
Sbjct: 443 ITYALDLFDRMVENGCCPDIEAYTSLISTYCQQ 475



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 224/557 (40%), Gaps = 68/557 (12%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  +FD + R G+C P+  S+  L+   C+   V+ V+  L  M  YG+  D  T T ++
Sbjct: 165 ARKVFDGMTRAGVC-PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 223

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
           +  C  G+F      F  +++ G     V ++  +    K   V +A  ++E M    ++
Sbjct: 224 RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 283

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            N  T   LI G  K    ++A +LF K+ K S +  +   Y V+IGG C+  +L  A  
Sbjct: 284 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 343

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           L   M   G+ P+    + LI      G       L+ K   E    N  T   N+++  
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY--NAVIDG 401

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G I +AY +L+                M     +  +  ++ I+I    K G +  
Sbjct: 402 FCKKGKIQEAYKVLR----------------MATSQGLKFDKITYTILITEHCKQGHITY 445

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL LF  M + GC  ++  Y +LI   C   ++EES +   +    G  PT  T  SM  
Sbjct: 446 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM-- 503

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
                                            I   CK G++  A R    MVQ G   
Sbjct: 504 ---------------------------------IAGYCKVGRSTLALRVFERMVQNGCFA 530

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D + Y A I GL    R++ A  L+  +      P  V    +    C+ ++ + A  + 
Sbjct: 531 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 590

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + +  +     V T ++++      G++D A L L ++L+ E  + D  TYT  I+  C 
Sbjct: 591 DRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLD-EDYAVDHATYTGFINS-CY 645

Query: 583 AGRPDDAIMLWNEMEEK 599
               ++   L +EM EK
Sbjct: 646 ---ENNRYALASEMSEK 659



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 138/302 (45%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             ++     + RL E+ +++ EM   G      T N + R        V A  +   M  
Sbjct: 115 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 174

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P  +    L+   C+ GK  E    L  M + GF  D    +  +  L +  R   
Sbjct: 175 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 234

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             E FR +   G  P+VV Y   I GLCK + V +A  +  EM+ +GL P+V T+  LI+
Sbjct: 235 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 294

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G CK G  ++A     ++++  S  P+V TYT +I G C  G+   A ML   M E+G  
Sbjct: 295 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 354

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN  T+  LI G CK      A      MK++G  P+++ + A+I  F  +     A++V
Sbjct: 355 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 414

Query: 663 LK 664
           L+
Sbjct: 415 LR 416



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/372 (20%), Positives = 160/372 (43%), Gaps = 25/372 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G  E A  LF ++ +     PN ++Y  ++   C+   +   EM L  M + 
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C  G FD+A  + N++   G++   + ++ ++  F K G++ +A
Sbjct: 352 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +++       ++ ++ T+ +LI    K+  +  AL LFD+M ++G   D   Y  +I  
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 471

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN---T 271
            C+ +Q+E + + + +    G+ P  +  + +I      G  TL ++ ++E    N    
Sbjct: 472 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALR-VFERMVQNGCFA 530

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS------ 325
            ++   +++  L     +++A  L + M+    +      + + F+      TS      
Sbjct: 531 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 590

Query: 326 ----------SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                     + D+++  L   G +D A    +++       +   Y   I+    +NR 
Sbjct: 591 DRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNR- 649

Query: 376 EESYELLREMEE 387
              Y L  EM E
Sbjct: 650 ---YALASEMSE 658


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 230/511 (45%), Gaps = 51/511 (9%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  LF ++K  G C P+  +YN L++   K   ++ VE  + EM+  G   D  T
Sbjct: 214 GELVEARALFVRMKAMG-CSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVT 272

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  +   G+ +KA S F E+   G V   V FS  + AF K G V +A +L  +M 
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR 332

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  NE T+  L+ G  K  R+D A+ L D+M   G   +   Y V++ GLCK  ++ 
Sbjct: 333 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  + S M+  G+  +                                  LL  +++  
Sbjct: 393 EADNVLSLMERGGVKAN---------------------------------ELLYTTLIHG 419

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              N + ++A +LL  M       + G+E+          + S +  +I  L KD K+D 
Sbjct: 420 HFMNNNSERALDLLNQM------KNKGMEL----------DVSLYGTLIWGLCKDQKVDE 463

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A SL  +M   G   N  +Y  ++D L  + +  E+  LL ++ +SGF+P   T  ++  
Sbjct: 464 AKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC+   +  A++   KMR  G +P V+  T LI   CK G   +A   + +M+ +G   
Sbjct: 524 GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSL 583

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V Y++ I G +    +  A  L   +   G   D+  Y   ISG C    + EA  + 
Sbjct: 584 DKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVL 643

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           +EMI  G+ P    YN LI  + K GN+++A
Sbjct: 644 SEMIGTGITPDKTVYNCLIRKYQKLGNMEEA 674



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 244/561 (43%), Gaps = 34/561 (6%)

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE-------------LIERMDDCNIRL 168
           ++ + + DHG +D+ V ++  V   +     + C              L+ R+ D     
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVP 198

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF ++I    K+  + +A  LF +M   G + D   Y+ +I G  K   LE   QL 
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSN 286
           SEM+ SG   D    + LI   S  G +        E   + V    +  ++ +      
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318

Query: 287 GSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           G + +A  L   M ++G                 + PN  ++  +++   K G+LD A+ 
Sbjct: 319 GLVQEAMKLFAQMRVRG-----------------MMPNEFTYTSLVDGTCKAGRLDDAIV 361

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM   G + NV  Y  ++DGLC   ++ E+  +L  ME  G K       ++     
Sbjct: 362 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHF 421

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
              +   AL+L+ +M+ +G E  V     LI  LCK  K  EA   L  M   G  P+ V
Sbjct: 422 MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTV 481

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  +  L    +   A+ L   I   G  P+VV Y  +I GLCKA  ++EA   FN+M
Sbjct: 482 IYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              GL P+V  Y  LI+G+CK G++++AM  ++ M++K   S D + YT+LIDG      
Sbjct: 542 RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK-GMSLDKVVYTSLIDGYMKQAN 600

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             DA  L  +M E G   +   +   I+G C  +  + A      M   G+ PD  V+  
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNC 660

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  +    N   A  +  EM
Sbjct: 661 LIRKYQKLGNMEEASSLQNEM 681



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 211/510 (41%), Gaps = 86/510 (16%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  ++ KS C         LI C    G +E+A   F ++KR+G+ V N  +++  ++A 
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGV-VANVVTFSTFVDAF 315

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK   V        +M+  G   +++T T L+   C +G+ D A+ + +E++  G V   
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           V +++++    K G+V +A  ++  M+   ++ NE  +  LIHG    +  ++AL L ++
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M   G   D ++Y  +I GLCK+++++ A  L  +M G G+ P+                
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN---------------- 479

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                            T++  +IM  L   G   +A  LL        I D G +    
Sbjct: 480 -----------------TVIYTTIMDALFKAGKESEAVALLH------KILDSGFQ---- 512

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 PN  ++  +I+ L K G +  A+S F +M ++G   NV  Y  LIDG C    L
Sbjct: 513 ------PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSL 566

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++  L+ EM + G         S                                   L
Sbjct: 567 NKAMHLMNEMIDKGMSLDKVVYTS-----------------------------------L 591

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I    K     +AF   T M++ G   D+ CY+  I G  ++  +  A  +  ++   G 
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            PD   YN +I    K   + EA  L NEM
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 137/569 (24%), Positives = 249/569 (43%), Gaps = 21/569 (3%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           P  +  L+  L   GL+++A     +V R+    PN  + N +L  L ++    LV    
Sbjct: 134 PSVVDTLLSLLADHGLLDDAVRALARV-RQLRVPPNTRTCNHILLRLARNRQGGLV---- 188

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           + + D     + +T   ++   C  G+  +A ++F  +   G   + V ++ L+  + K 
Sbjct: 189 RRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 248

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++++  +L+  M       +  T+  LI+ F K  R++KA   F +M + G  ++   +
Sbjct: 249 GDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTF 308

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
              +   CK   ++ A++L+++M+  G+ P+    + L+      G L            
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLD----------- 357

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
            + + LL   + + LV N  +     ++  + K   +A+    + ++ +G V  N   + 
Sbjct: 358 -DAIVLLDEMVHQGLVPN--VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYT 414

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+    +   + AL L  +M   G   +V LY  LI GLC   +++E+  LL +M   
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC 474

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G +P      ++   L +      A+ L+ K+   G +P V     LI  LCK G   EA
Sbjct: 475 GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEA 534

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
                 M + G  P++  Y+A I G   I  ++ A+ L  ++   G   D V Y  +I G
Sbjct: 535 ISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDG 594

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
             K   + +A  L  +MI  GL   +  Y   I+G+C    + +A   LS M+     +P
Sbjct: 595 YMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI-GTGITP 653

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           D   Y  LI      G  ++A  L NEME
Sbjct: 654 DKTVYNCLIRKYQKLGNMEEASSLQNEME 682


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 54/449 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +++       +  +AL+L  +M +     +A  Y+ +I G C   +++ AL +  EM
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 232 KG-SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   GI P+      +I+               W           C          G +D
Sbjct: 541 RERGGIAPNQYTYGTVISG--------------W-----------CKV--------GRVD 567

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +   M+                KG V P    ++ +I      GKLD AL     M
Sbjct: 568 EAVKVFDEMLT---------------KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 612

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G    V  YN L+  L    R  E+YEL+ EM   G  P  FT N +    C+  +V
Sbjct: 613 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 672

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL +   M  +G    V   T LI  L K G+  E  +   + V+ G  PD+V Y+A 
Sbjct: 673 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 732

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +D A E+  ++      PD V YN ++ GLC   RV EA  L +EM  +G+
Sbjct: 733 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 792

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYN LI+G+   G++  A+   + M+ K   +P ++TY  LI GLC  G+ DDA 
Sbjct: 793 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAE 851

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +  EM E G  P+  T+++LI GL   D
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTED 880



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 203/445 (45%), Gaps = 25/445 (5%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           +L+LYS MK   +      L  L+++        L          + T T   N ++R L
Sbjct: 436 SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTF--NIMLRHL 493

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
            S G   +A  LL+ M +                    PN  +++ +I      G++  A
Sbjct: 494 CSAGKPARALELLRQMPR--------------------PNAVTYNTVIAGFCSRGRVQAA 533

Query: 344 LSLFREMTQIGCM-QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMF 401
           L + REM + G +  N + Y  +I G C   R++E+ ++  EM   G  KP     N++ 
Sbjct: 534 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C +  +  AL    +M  +G    V    LL+  L   G+  EA+  + +M  +G  
Sbjct: 594 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 653

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y+  I G      V  ALE+F ++   G    VV Y  +I  L K  +V E + L
Sbjct: 654 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 713

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+E + +G+ P +  YN LIN    SGNID+A   +  M EK+  +PD +TY TL+ GLC
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLC 772

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           + GR D+A  L +EM E+G  P+ +T+  LI+G       + AL     M  KG  P + 
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            + ALI           A  ++KEM
Sbjct: 833 TYNALIQGLCKNGQGDDAENMVKEM 857



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           AP   L  D+ + R  +       ++R L S G    A  L  Q+ R     PN  +YN 
Sbjct: 465 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNT 519

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           ++   C    V      ++EM++ G    ++YT   ++  +C  G+ D+A+ VF+E++  
Sbjct: 520 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 579

Query: 131 GWVDEH--VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           G V     +++ L+  +   G++D A    +RM +  + +   T+ +L+H      R  +
Sbjct: 580 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 639

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M   G A D   Y+++I G CK   ++ AL+++  M   G+       + LI 
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S +G++    K   E   R +    +L N+++    ++G+ID+A+ ++  M K     
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR--- 756

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+  +++ ++  L   G++D A  L  EMT+ G   ++  YN LI
Sbjct: 757 -------------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      ++++  +  EM   GF PT  T N++ + LC+      A N+V++M   G  
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863

Query: 427 P 427
           P
Sbjct: 864 P 864



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 178/409 (43%), Gaps = 58/409 (14%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPG--ALGFLIRCLGSVGLVEEANMLFDQVKR 58
           +A   SR R  A L ++ +  ++ R  ++P     G +I     VG V+EA  +FD++  
Sbjct: 521 IAGFCSRGRVQAALDIMRE--MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 578

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   P    YN L+                                     YC+ G+ D
Sbjct: 579 KGEVKPEAVMYNALIGG-----------------------------------YCDQGKLD 603

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            AL   + +++ G  +    +++L+ A    G   +A EL+E M    +  +  T+ +LI
Sbjct: 604 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 663

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +G  K+  V KAL++F+ M++ G  +    Y  +I  L K  Q++   +L+ E    GI 
Sbjct: 664 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 723

Query: 238 PDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           PD  + + LI S S  G +     +    E + +    +  N++MR L   G +D+A  L
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  M +               +G + P+  +++ +I+     G +  AL +  EM   G 
Sbjct: 784 IDEMTE---------------RG-IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
              +  YN LI GLC + + +++  +++EM E+G  P   T  S+   L
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  +F+ + R G+      +Y  L+ AL K   V   +    E    G   D   
Sbjct: 670 GNVKKALEIFENMSRRGVRA-TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 728

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +  SG  D+A  +  E+       D+  ++ L+      G VD+A +LI+ M 
Sbjct: 729 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 788

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  I+ +  T+  LI G+  K  V  AL++ ++M   GF      Y+ +I GLCKN Q +
Sbjct: 789 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 848

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A  +  EM  +GITPD      LI   + E E
Sbjct: 849 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 218/476 (45%), Gaps = 38/476 (7%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           + G++++A  L+E M    +  +    C  LI       R  +A ++      +    D 
Sbjct: 68  RRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCEPDV 120

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEI 263
             Y+ ++ G C   QL+ A +L + M    + PD    + LI      G     L V + 
Sbjct: 121 MSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 264 WEDR----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
              R    DV T T+L  +  +         QA  LL  M       D G          
Sbjct: 178 MLRRGCVPDVVTYTILLEATCK----RSGYKQAVKLLDEM------RDKGC--------- 218

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            +P+  ++++++N + ++G++D A+   + +   GC  N   YN ++ GLC + R E++ 
Sbjct: 219 -APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           +L+ EM   G  P   T N +   LCRR  V  A+ ++ ++   G  P       ++   
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK  K   A  F+  MV  G  PDIV Y+  +  L     VD A+EL   +   GC P +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++YN +I GL KA +  EA +L NEM+TKGL P + TY+ + +G C+ G I++A+    +
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            ++     P+ + Y  ++ GLC       AI L+  M   GC PN  T+  LI GL
Sbjct: 458 -VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 194/411 (47%), Gaps = 59/411 (14%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N  +R+LV  G +++A  L+++M   EP A                       +I  L  
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMAGLEPSA-----------------AGPCAALIKKLCA 102

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+   A  +        C  +V  YN ++ G C + +L+ +  L+  M     +P  +T
Sbjct: 103 SGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYT 154

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N++ R LC R     AL ++  M  +G  P V   T+L++  CK     +A + L +M 
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            +G  PDIV Y+  + G+    RVD A+E  + + ++GC P+ V+YNI++ GLC A+R  
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM---------------------- 554
           +AE L  EM  KG  P+V T+N+LI+  C+ G ++ AM                      
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 555 --LCLSRMLEK---------ESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
              C  + +++          SG  PD+++Y TL+  LC  G  D A+ L +++++KGC 
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P  I++  +I GL K  +   AL     M  KG++PD+  +  + S    E
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCRE 445



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 217/436 (49%), Gaps = 30/436 (6%)

Query: 215 LCKNKQLEMALQLYSEMKG---SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT 271
           L +   LE A++L   M G   S   P   ++ KL  S       T   + +    + + 
Sbjct: 66  LVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGR-----TAEARRVLASCEPDV 120

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
           M+   N+++      G +D A  L+ AM                    + P+T +++ +I
Sbjct: 121 MSY--NAMVAGYCVTGQLDNARRLVAAM-------------------PMEPDTYTYNTLI 159

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
             L   G+ D AL++  +M + GC+ +V  Y  L++  C  +  +++ +LL EM + G  
Sbjct: 160 RGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCA 219

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N +   +C+   V  A+  ++ +   G EP      +++K LC   +  +A + 
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL 279

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           + +M ++G  P++V ++  I  L     V+ A+E+   I  +GC P+ ++YN I+   CK
Sbjct: 280 MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCK 339

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            +++  A      M++ G  P + +YN L+   C+ G +D A+  L ++ +K   +P +I
Sbjct: 340 QKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK-GCTPVLI 398

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           +Y T+IDGL  AG+ ++A+ L NEM  KG  P+ IT+  + +GLC+  R   A+  F  +
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458

Query: 632 KEKGMKPDMFVFVALI 647
           ++ G++P+  ++ A++
Sbjct: 459 QDMGIRPNTVLYNAIL 474



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 206/450 (45%), Gaps = 27/450 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C SG+  +A  V          D   ++ ++  +   G++D A  L+  M    +
Sbjct: 96  LIKKLCASGRTAEARRVLASC----EPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---M 148

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+  LI G   + R D AL + D M + G   D   Y +++   CK    + A++
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM+  G  PD    + ++     EG     V +  E              ++ L S 
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGR----VDDAME-------------FLKSLPSY 251

Query: 287 GSIDQ--AYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G      +YN+ L+ +   E   D    M  + +    PN  +F+++I+ L + G ++ A
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           + +  ++ + GC  N   YN ++   C   +++ +   +  M  SG  P   + N++   
Sbjct: 312 MEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTA 371

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LCR  +V  A+ L+ +++ +G  P +     +I  L K GK  EA   L +MV +G  PD
Sbjct: 372 LCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ YS    GL    R++ A++ F  +   G  P+ V YN I+ GLCK +    A DLF 
Sbjct: 432 IITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFT 491

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            M++ G +P+ +TY +LI G    G + +A
Sbjct: 492 YMVSNGCMPNESTYTILIEGLAYEGLVKEA 521



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 229/515 (44%), Gaps = 62/515 (12%)

Query: 21  VVKSRCFMSPGALG---FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC 77
           +V+S   + P A G    LI+ L + G   EA  +         C P+  SYN ++   C
Sbjct: 78  LVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLAS------CEPDVMSYNAMVAGYC 131

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV 137
            +  +D     +  M       D YT   L++  C  G+ D AL+V ++++  G V + V
Sbjct: 132 VTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVV 188

Query: 138 -FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ILL A  K     +A +L++ M D     +  T+ V+++G  ++ RVD A++    +
Sbjct: 189 TYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSL 248

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   +   Y++++ GLC  ++ E A +L +EM   G  P+    + LI+        
Sbjct: 249 PSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLIS-------- 300

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                                     L   G ++ A  +L                  I 
Sbjct: 301 -------------------------FLCRRGLVEPAMEILD----------------QIP 319

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K   +PN+ S++ I++   K  K+D A++    M   GC  ++  YN L+  LC    ++
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVD 379

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + ELL ++++ G  P   + N++   L +      AL L+ +M  +G +P +   + + 
Sbjct: 380 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC+ G+  EA +    +   G  P+ V Y+A + GL   +    A++LF  + ++GC 
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           P+   Y I+I GL     V EA ++  E+ ++G++
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 15/271 (5%)

Query: 24  SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           SR    P  + F  LI  L   GLVE A  + DQ+ + G C PN+ SYN +L A CK   
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG-CTPNSLSYNPILHAFCKQKK 342

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
           +D     ++ M   G   D  +   LL   C  G+ D A+ + +++ D G     + ++ 
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           ++   +K G+ ++A EL+  M    ++ +  T+  +  G  ++ R+++A++ F K+   G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              +  +Y+ I+ GLCK +    A+ L++ M  +G  P+    + LI   + EG    LV
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEG----LV 518

Query: 261 KEIWEDRDVNTMTLLCNS--IMRILVSNGSI 289
           KE  E      M  LC+   + + LV+ G+I
Sbjct: 519 KEARE-----MMAELCSRGVVSKTLVNKGAI 544



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I  LC + R AEA  +          P V +YN ++ G+C +G +D A     R++   
Sbjct: 96  LIKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNA----RRLVAAM 146

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PD  TY TLI GLC  GR D+A+ + ++M  +GC P+ +T+  L+   CK    + A
Sbjct: 147 PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA 206

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +     M++KG  PD+  +  +++    E     A E LK +
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSL 248


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 197/449 (43%), Gaps = 54/449 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +++       +  +AL+L  +M +     +A  Y+ +I G C   +++ AL +  EM
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 232 KG-SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   GI P+      +I+               W           C          G +D
Sbjct: 546 RERGGIAPNQYTYGTVISG--------------W-----------CKV--------GRVD 572

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +   M+                KG V P    ++ +I      GKLD AL     M
Sbjct: 573 EAVKVFDEMLT---------------KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 617

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G    V  YN L+  L    R  E+YEL+ EM   G  P  FT N +    C+  +V
Sbjct: 618 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 677

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL +   M  +G    V   T LI  L K G+  E  +   + V+ G  PD+V Y+A 
Sbjct: 678 KKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 737

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +D A E+  ++      PD V YN ++ GLC   RV EA  L +EM  +G+
Sbjct: 738 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGI 797

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYN LI+G+   G++  A+   + M+ K   +P ++TY  LI GLC  G+ DDA 
Sbjct: 798 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAE 856

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +  EM E G  P+  T+++LI GL   D
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGLTTED 885



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 203/445 (45%), Gaps = 25/445 (5%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           +L+LYS MK   +      L  L+++        L          + T T   N ++R L
Sbjct: 441 SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTF--NIMLRHL 498

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
            S G   +A  LL+ M +                    PN  +++ +I      G++  A
Sbjct: 499 CSAGKPARALELLRQMPR--------------------PNAVTYNTVIAGFCSRGRVQAA 538

Query: 344 LSLFREMTQIGCM-QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMF 401
           L + REM + G +  N + Y  +I G C   R++E+ ++  EM   G  KP     N++ 
Sbjct: 539 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C +  +  AL    +M  +G    V    LL+  L   G+  EA+  + +M  +G  
Sbjct: 599 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 658

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           PD+  Y+  I G      V  ALE+F ++   G    VV Y  +I  L K  +V E + L
Sbjct: 659 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 718

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+E + +G+ P +  YN LIN    SGNID+A   +  M EK+  +PD +TY TL+ GLC
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLC 777

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
           + GR D+A  L +EM E+G  P+ +T+  LI+G       + AL     M  KG  P + 
Sbjct: 778 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            + ALI           A  ++KEM
Sbjct: 838 TYNALIQGLCKNGQGDDAENMVKEM 862



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           AP   L  D+ + R  +       ++R L S G    A  L  Q+ R     PN  +YN 
Sbjct: 470 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNT 524

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           ++   C    V      ++EM++ G    ++YT   ++  +C  G+ D+A+ VF+E++  
Sbjct: 525 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 584

Query: 131 GWVDEH--VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           G V     +++ L+  +   G++D A    +RM +  + +   T+ +L+H      R  +
Sbjct: 585 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 644

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M   G A D   Y+++I G CK   ++ AL+++  M   G+       + LI 
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S +G++    K   E   R +    +L N+++    ++G+ID+A+ ++  M K     
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR--- 761

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+  +++ ++  L   G++D A  L  EMT+ G   ++  YN LI
Sbjct: 762 -------------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 808

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      ++++  +  EM   GF PT  T N++ + LC+      A N+V++M   G  
Sbjct: 809 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868

Query: 427 P 427
           P
Sbjct: 869 P 869



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 178/409 (43%), Gaps = 58/409 (14%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPG--ALGFLIRCLGSVGLVEEANMLFDQVKR 58
           +A   SR R  A L ++ +  ++ R  ++P     G +I     VG V+EA  +FD++  
Sbjct: 526 IAGFCSRGRVQAALDIMRE--MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 583

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   P    YN L+                                     YC+ G+ D
Sbjct: 584 KGEVKPEAVMYNALIGG-----------------------------------YCDQGKLD 608

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            AL   + +++ G  +    +++L+ A    G   +A EL+E M    +  +  T+ +LI
Sbjct: 609 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 668

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +G  K+  V KAL++F+ M++ G  +    Y  +I  L K  Q++   +L+ E    GI 
Sbjct: 669 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 728

Query: 238 PDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           PD  + + LI S S  G +     +    E + +    +  N++MR L   G +D+A  L
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  M +               +G + P+  +++ +I+     G +  AL +  EM   G 
Sbjct: 789 IDEMTE---------------RG-IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
              +  YN LI GLC + + +++  +++EM E+G  P   T  S+   L
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  +F+ + R G+      +Y  L+ AL K   V   +    E    G   D   
Sbjct: 675 GNVKKALEIFENMSRRGVRA-TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +  SG  D+A  +  E+       D+  ++ L+      G VD+A +LI+ M 
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 793

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  I+ +  T+  LI G+  K  V  AL++ ++M   GF      Y+ +I GLCKN Q +
Sbjct: 794 ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 853

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A  +  EM  +GITPD      LI   + E E
Sbjct: 854 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 244/572 (42%), Gaps = 55/572 (9%)

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF-SKWGEVDKAC 155
           WG +        QV    G   +A  + ++++ +G V   V      AF S+     +  
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLV---VTVDSCNAFLSRIANNSEGI 242

Query: 156 EL-IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
           E+ I+   +  I  N  ++ ++I+   +  +V +A +L  +M       D   Y  +I G
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            C   +L+ AL+L  +M+  G+ P                               N  T 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKP-------------------------------NRYTY 331

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             NSI+ +L   G   +A  +L+ M+  + I                P+   +  +I+  
Sbjct: 332 --NSIILLLCKIGKSFEAEKVLREMMSQKII----------------PDNVVYTTLIHGF 373

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A   F EM       +   Y  LI G     ++ E   L  EM   G KP  
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T  ++    C+  ++V A +L  +M   G  P +     LI  LCKHG+   A   L +
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M ++G   ++  Y++ + G+     ++ A++L +++   G  PD + Y  +I   C+   
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A  L  EM+ +GL P+V T+N+L+NG+C  G ++     L  MLEK    PD ITY 
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK-GIVPDAITYN 612

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TL+   CI    +    ++  M  +G AP+  T+  LI G CK    + A   ++ M EK
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           G  P +  + ALI  F  +     A E+ +EM
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEM 704



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 246/576 (42%), Gaps = 60/576 (10%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           +P A     + L  +G + EA  L D++   GL V  + S N  L  +  +   + +EM 
Sbjct: 189 NPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVD-SCNAFLSRIANNS--EGIEMA 245

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           +K   +YG  ++  +                                  ++I++ +  + 
Sbjct: 246 IKVFCEYGISWNTTS----------------------------------YNIIIYSLCRL 271

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+V +A  L+ +MD  +   +  ++  +I G+     + KAL+L D M   G   +   Y
Sbjct: 272 GKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY 331

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-- 266
           + II  LCK  +   A ++  EM    I PD  + + LI      G +    K  W D  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK--WFDEM 389

Query: 267 --RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
             + ++   +   ++++     G + +  NL   MI                +G + P+ 
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS---------------RG-LKPDE 433

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +I+   K G++  A SL  EM Q+G   N+  Y  LIDGLC    L+ + ELL E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M + G +      NSM   +C+  ++  A+ L+++M V G +P     T +I   C+ G 
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A + L +M+  G  P +V ++  + G   +  ++    L   +   G  PD + YN 
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++   C    +     ++  M  +G+ P   TYN+LI G CK+ N+ +A      M+EK 
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK- 672

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
              P V +Y  LI       +  +A  L+ EM   G
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 223/504 (44%), Gaps = 22/504 (4%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   +I  L  +G V+EA+ L  Q+       P+  SY+ +++  C    +      + +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRS-STPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           MQ  G   ++YT   ++ + C  G+  +A  V  E++    + D  V++ L+  F K G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V  A +  + M    I  +  T+  LI GF +  +V +   LF +M   G   D   Y  
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I   CK  ++  A  L++EM   G+TP+      LI      GEL    + + E R   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 271 TMTLLC--NSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSF 327
               +C  NS++  +   G+I+QA  L++ M + G                 + P+  ++
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG-----------------IDPDAITY 541

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+   + G +D A  L +EM   G    V  +N L++G C    LE+   LL  M E
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P   T N++ +  C R  +     + ++MR QG  P      +LIK  CK     E
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A+    +M+++G++P +  Y+A I      K++  A ELF ++  HG   D   YN  + 
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721

Query: 508 GLCKAQRVAEAEDLFNEMITKGLI 531
              +   V    +L +E I K L+
Sbjct: 722 MCYEEGDVEITLNLCDEAIEKCLL 745


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/688 (24%), Positives = 289/688 (42%), Gaps = 121/688 (17%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +S  +   L   L   GL++E N LF  +  +G+  PN  S+N ++ A CK  +V + + 
Sbjct: 153 LSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGV-EPNLISFNTMVNAHCKIGNVVVAKA 211

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCN---------------------------------- 113
               +  +G+  D +T T L+  YC                                   
Sbjct: 212 YFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFC 271

Query: 114 -SGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
             G+ D+AL +F ++ + G + D   +++L+ AF + G+  +A +  E M +  I  N  
Sbjct: 272 EVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVY 331

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T+ VLI  F K  ++D+ +++   M + G  S    ++ +I G CK   +E A+ +   M
Sbjct: 332 TYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSM 391

Query: 232 KGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDR-DVNTMTLLCNSIMRILVSNG 287
           K + + P+    ++LI     +  +     L+ +++E++   N +T   N+++  L    
Sbjct: 392 KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTY--NTLIHGLCKAR 449

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            +D A+ L   MIK                G V P+  +F   I+ L K GK++ A  +F
Sbjct: 450 VVDSAWRLHHLMIK---------------DGFV-PDQRTFCAFIDCLCKMGKVEQAHQVF 493

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             + +     N FLY  LIDG C + +  +++ L + M   G  P   T N +   L + 
Sbjct: 494 ESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKE 553

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V  A++LV  M     +P V   T+LI+E+ +      A  FL  M+           
Sbjct: 554 GKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI----------- 602

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
                                   + GC P+VV Y   I   C+  R+ EAE++  ++  
Sbjct: 603 ------------------------SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKE 638

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           +G++     Y++L+N +   G +D A   L RM +     P   TY+ L+  L       
Sbjct: 639 EGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT-GCEPSRQTYSILLKHLIFEKYNK 697

Query: 588 DAI--------------------------MLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           + +                          ML+ +M E+GC PN  T+  LI GLCK +  
Sbjct: 698 EGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHL 757

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISA 649
             A   F  MKE G+ P   +  +L+S+
Sbjct: 758 SLAFRLFNHMKESGISPSENIHNSLLSS 785



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 265/581 (45%), Gaps = 47/581 (8%)

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH-----------GWVDEHVFSI--- 140
           +G+ +  ++  PLL +   +G    A +V N +I               +  H FS+   
Sbjct: 97  HGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVT 156

Query: 141 ----LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
               L +  S++G +D+   L + M +  +  N  +F  +++   K   V  A   F  +
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG-- 254
            K GF  D+  Y  +I G CK  +L  A +++  M   G   +    + LI    + G  
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 255 ----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
               EL   +KE     DV T T+L  +   +    G   +A    + M++       G+
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEV----GKETEALKFFEEMVEN------GI 326

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           E          PN  ++ ++I+   K GK+D  + +   M + G + +V  +N LIDG C
Sbjct: 327 E----------PNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC 376

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WV 429
               +E++  +L  M+ +   P   T N +    CR++ +  A+ L+ KM      P  V
Sbjct: 377 KRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLV 436

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +NT LI  LCK      A+R    M+++GF+PD   + A I  L  + +V+ A ++F  
Sbjct: 437 TYNT-LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +       +   Y  +I G CKA++ ++A  LF  M+ +G  P+  T+N+L++G  K G 
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           ++ AM  L  ++ K    P V TYT LI+ +      D A M  ++M   GC PN +T+ 
Sbjct: 556 VEDAM-SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYT 614

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           A I   C+  R   A      +KE+G+  D F++  L++A+
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 152/612 (24%), Positives = 275/612 (44%), Gaps = 49/612 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VG ++EA  LF Q+K +G C P+  +Y  L+ A C+           +EM + 
Sbjct: 266 LIHGFCEVGKIDEALELFFQMKEDG-CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN 324

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   + YT T L+  +C  G+ D+ + + + +++ G V   V F+ L+  + K G ++ A
Sbjct: 325 GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDA 384

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M    +  N +T+  LI GF +K  +D+A+ L +KM ++  + +   Y+ +I G
Sbjct: 385 ICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTM 272
           LCK + ++ A +L+  M   G  PD       I      G  E    V E  +++     
Sbjct: 445 LCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN 504

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM-LMIFKGTVSPNTSSFDIII 331
             L  +                L+    K E  +D  +    M+F+G   PN+ +F++++
Sbjct: 505 EFLYTA----------------LIDGYCKAEKFSDAHLLFKRMLFEGCF-PNSITFNVLL 547

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K+GK++ A+SL   M +      V  Y  LI+ +   +  + +   L +M  SG +
Sbjct: 548 DGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQ 607

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T  +  +  CR+  ++ A  +V K++ +G         +L+      G+   AF  
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLI-----------DIKRVDLALE--------------- 485
           L  M   G  P    YS  +  LI           D+   +++++               
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF  +   GC P+V  Y+ +I GLCK + ++ A  LFN M   G+ PS   +N L++  C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K G  ++A+  L  M+E    +  + +Y  L+ GL   G  + A  ++  +   G   + 
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLA-HLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDE 846

Query: 606 ITFMALITGLCK 617
           + +  L+ GL +
Sbjct: 847 VVWKVLLDGLVR 858



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 201/495 (40%), Gaps = 58/495 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN L+  LCK+  VD        M   G+  D+ T    +   C  G+ ++A  V
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 124 FNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F  + + H   +E +++ L+  + K  +   A  L +RM       N  TF VL+ G  K
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + +V+ A+ L D M K         Y ++I  + +    + A     +M  SG  P+   
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612

Query: 243 LSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSN----GSIDQAYNL 295
            +  I +   +G L     +V +I E+       LL + I  +LV+     G +D A+ +
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEG-----ILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 296 LQAMIKG--EPIADVGVEML--MIFKGT------VSPNTSSFDIIINTLLKDGKLDLALS 345
           L  M     EP       +L  +IF+        +  N+++  +    + K    ++   
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF +M + GC+ NV  Y+ LI GLC    L  ++ L   M+ESG  P+    NS      
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS------ 781

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
                                        L+   CK G   EA R L  M++   L  + 
Sbjct: 782 -----------------------------LLSSCCKLGMHEEALRLLDSMMEYNHLAHLE 812

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y   + GL +    + A E+FR + + G   D V + +++ GL +   V E   L + M
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872

Query: 526 ITKGLIPSVATYNLL 540
              G      T+ +L
Sbjct: 873 EKTGCRLHSDTHTML 887


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 217/447 (48%), Gaps = 23/447 (5%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEI 263
           ++ I+  L K K    AL L+ +M+ +GI  DF   + LI   S  G      ++  K +
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
            +      +T   N++++ L   G I QA +        + +   G  +  +  GT    
Sbjct: 124 KKGYHPTAITF--NTLIKGLCLKGHIHQALHF------HDKVVAQGFHLDQVSYGT---- 171

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
                 +IN L K G++  AL L + +       N  +YN +ID +C +  + ++++L  
Sbjct: 172 ------LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M      P  FT N++         +  A++L  KM+ +   P V    +L+   CK G
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +A   L  M+++   PD+V Y++ + G   I +V+ A ++F  + + G   +V  Y 
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +++G CK + V EA +LF EM  + +IP+V TY+ LI+G CK G I  A+  +  M ++
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               P+++TY++++D LC     D AI L   ++++G  P+  T+  LI GLC+  R   
Sbjct: 406 -GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A   F  +  KG   D++ +  +I  F
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGF 491



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/592 (24%), Positives = 245/592 (41%), Gaps = 86/592 (14%)

Query: 47  EEANML--FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           EE N++  F+ +       P  + +N +L +L K+          ++M+  G   D +T 
Sbjct: 40  EENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTF 99

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
             L+  +   G    + S+F +I+  G+   H  +I                        
Sbjct: 100 NILINCFSQLGLNSLSFSIFAKILKKGY---HPTAI------------------------ 132

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
                  TF  LI G   K  + +AL   DK+   GF  D   Y  +I GLCK  ++  A
Sbjct: 133 -------TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 185

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           LQL   + G  + P+                                  ++ N I+  + 
Sbjct: 186 LQLLKRVDGKLVQPN---------------------------------AVMYNMIIDNMC 212

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
               ++ A++L   M+                   + P+  +++ +I+      KL+ A+
Sbjct: 213 KAKLVNDAFDLYSQMVAKR----------------ICPDVFTYNALISGFSAVSKLNYAI 256

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            LF +M +     NV+ +N L+DG C   ++ ++  +L  M +   KP   T NS+    
Sbjct: 257 DLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C    V  A ++   M   G    V+  T ++   CK     EA     +M     +P++
Sbjct: 317 CSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V YS+ I GL  + R+  AL+L  ++   G  P++V Y+ I+  LCK   V +A  L   
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN 436

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +  +G+ P + TY +LI G C+SG ++ A      +L K   + DV  YT +I G C  G
Sbjct: 437 LKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK-GYNLDVYAYTVMIQGFCDKG 495

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
             D A+ L ++ME+ GC PN  T+  +I  L + D    A    R M  +G+
Sbjct: 496 FFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 180/365 (49%), Gaps = 38/365 (10%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P T  F+ I+++L+K      ALSL ++M   G   + F +N LI+          S+ 
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKEL 439
           +  ++ + G+ PT  T N++ + LC +  +  AL+   K+  QG H   V + T LI  L
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT-LINGL 176

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +  +   P+ V Y+  I  +   K V+ A +L+  + A   CPDV
Sbjct: 177 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN +ISG     ++  A DLFN+M  + + P+V T+N+L++G+CK G ++ A + L+ 
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGR---------------------------------- 585
           M+ K+   PDV+TY +L+DG C   +                                  
Sbjct: 297 MM-KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355

Query: 586 -PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D+AI L+ EM  +   PN +T+ +LI GLCK  R   AL     M ++G  P++  + 
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415

Query: 645 ALISA 649
           +++ A
Sbjct: 416 SILDA 420



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P  F  N +   L + +    AL+L ++M + G E       +LI    + G    +F  
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              ++++G+ P  + ++  I GL     +  AL     + A G   D V+Y  +I+GLCK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             R+  A  L   +  K + P+   YN++I+  CK+  ++ A    S+M+ K    PDV 
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI-CPDVF 237

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY  LI G     + + AI L+N+M+++   PN  TF  L+ G CK  +   A V   +M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 632 KEKGMKPDMFVFVALISAFLS 652
            +  +KPD+  + +L+  + S
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCS 318



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 187/396 (47%), Gaps = 20/396 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  VG +  A  L  +V  + L  PN   YN +++ +CK+  V+       +
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVDGK-LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGE 150
           M       D +T   L+  +    + + A+ +FN++       + + F+IL+  F K G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           V+ A  ++  M   +I+ +  T+  L+ G+   ++V+KA  +FD M   G  ++  +Y  
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           ++ G CK K ++ A+ L+ EM+   I P+    S LI      G +   +K + E  DR 
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                +  +SI+  L  N  +D+A  LL  +       D G+           P+  ++ 
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNL------KDQGIR----------PDMYTYT 450

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+I  L + G+L+ A ++F ++   G   +V+ Y  +I G C+    +++  LL +ME++
Sbjct: 451 ILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           G  P   T   +   L  + +   A  L+R+M V+G
Sbjct: 511 GCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 145/325 (44%), Gaps = 22/325 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI    +V  +  A  LF+++K+E +  PN Y++N L++  CK   V+  ++ L  M   
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENIN-PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               D  T   L+  YC+  + +KA  +F+ +   G + +  +++ ++  F K   VD+A
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L E M    I  N  T+  LI G  K  R+  AL+L D+M   G   +   Y  I+  
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNT 271
           LCKN  ++ A+ L + +K  GI PD    + LI      G L    + ++ED   +  N 
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE-DAQNVFEDLLVKGYNL 479

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                  +++     G  D+A  LL  M     I                PN  +++++I
Sbjct: 480 DVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI----------------PNAKTYELVI 523

Query: 332 NTLLKDGKLDLALSLFREMTQIGCM 356
            +L +  + D A  L REM   G +
Sbjct: 524 LSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 2/227 (0%)

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P  + N +L   L K      A      M   G   D   ++  I     +    L+  +
Sbjct: 60  PTFQFNKIL-SSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           F  I   G  P  + +N +I GLC    + +A    ++++ +G      +Y  LING CK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G I  A+  L R ++ +   P+ + Y  +ID +C A   +DA  L+++M  K   P+  
Sbjct: 179 VGRITAALQLLKR-VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           T+ ALI+G     +   A+  F  MK++ + P+++ F  L+  F  E
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
           P    ++  +  L+  K    AL L + +  +G   D   +NI+I+   +    + +  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F +++ KG  P+  T+N LI G C  G+I QA+    +++  +    D ++Y TLI+GLC
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVA-QGFHLDQVSYGTLINGLC 177

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
             GR   A+ L   ++ K   PN + +  +I  +CK      A   +  M  K + PD+F
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 642 VFVALISAF--LSELN 655
            + ALIS F  +S+LN
Sbjct: 238 TYNALISGFSAVSKLN 253


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 234/519 (45%), Gaps = 53/519 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF  L   F + G +++A +   RM    +    ++    ++   K  + D + + F  M
Sbjct: 184 VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDM 243

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A     Y+++IG +CK   +  A  L+ +MK  G+TPD    + LI      G+L
Sbjct: 244 VGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG---YGKL 300

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            LL                              D+++ L + M       DVG E     
Sbjct: 301 GLL------------------------------DESFCLFEEM------KDVGCE----- 319

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++ +IN   K  ++  A     EM   G   NV  Y+ LID LC  + L+
Sbjct: 320 -----PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQ 374

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLL 435
           ++ + L +M   G  P  FT  S+    C+   +  AL L  +M +VQ     V + TLL
Sbjct: 375 QAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLL 434

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
              LCK G+ MEA      M++ G  P++  Y+A + G I  KRV+ ALEL ++I     
Sbjct: 435 -DGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD++ Y  II GLC   ++ E E + +EM   G+  +   Y + ++ + K+G   +A+ 
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF-MALITG 614
            L  M +       ++T+  LIDGLC  G  ++AI  +  M +    PN +    ALI G
Sbjct: 554 LLQEMCDL-GVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDG 612

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           LCK +   AA   F  M++K M PD   + ALI   L  
Sbjct: 613 LCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKH 651



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 265/612 (43%), Gaps = 67/612 (10%)

Query: 5   LSRARRIAPLRVLAQDVVKSR--CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           L  +RRI P   + + +  +R  C    G    L      +G++EEA   F ++ R  + 
Sbjct: 155 LISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRV- 213

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P   S N  L  L K+   DL     ++M   G     +T   ++   C  G    A S
Sbjct: 214 FPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKS 273

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F+++   G   + V ++ L+  + K G +D++  L E M D     +  T+  LI+ F 
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  ++ KA     +M  SG   +   Y  +I  LCK   L+ A++   +M+  G++P+  
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393

Query: 242 ILSKLITSCSDEGELTLLVK------EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             + LI +    G L+  +K      ++    +V T T L +     L   G + +A +L
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDG----LCKEGRMMEAEDL 449

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            +AMIK                  V+PN  ++  +++  +K+ +++ AL L +E+ +   
Sbjct: 450 FRAMIKA----------------GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             ++ LY  +I GLC+ N+LEE   ++ EM+  G +                     A +
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR---------------------ANS 532

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           ++  +R+  +               K GK +EA   L +M   G    IV +   I GL 
Sbjct: 533 VIYTIRMDAY--------------FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAY-NIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
               V+ A++ F  +      P+ VA    +I GLCK   +  A+ LF+EM  K ++P  
Sbjct: 579 KKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDK 638

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
             Y  LI+G  K  +  +A+   SRM E      D+  YT+L+ GL        A M  N
Sbjct: 639 IAYTALIDGNLKHKDFQEALNIRSRMSEL-GMELDLHAYTSLVWGLSQGNLVQQARMFLN 697

Query: 595 EMEEKGCAPNRI 606
           EM  KG  P+ I
Sbjct: 698 EMIGKGIVPDEI 709



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 167/350 (47%), Gaps = 2/350 (0%)

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
           P  DV  E+L   +    P    FD + +  ++ G L+ A   F  MT+          N
Sbjct: 163 PGFDV-FEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCN 221

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
             +  L  + + + S +  R+M  +G   + FT N M   +C+  D+V A +L  +M+  
Sbjct: 222 AFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQM 281

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G  P +     LI    K G   E+F    +M   G  PD++ Y+A I      +++  A
Sbjct: 282 GLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKA 341

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
                ++   G  P+VV Y+ +I  LCK   + +A     +M   GL P+  TY  LI+ 
Sbjct: 342 FHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK+G +  A+     ML+ + G  +V+TYTTL+DGLC  GR  +A  L+  M + G  P
Sbjct: 402 NCKAGYLSDALKLADEMLQVQVGF-NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTP 460

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           N  T+ AL+ G  K  R   AL   + +KEK +KPD+ ++  +I    S+
Sbjct: 461 NLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQ 510



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 212/460 (46%), Gaps = 23/460 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G +GL++E+  LF+++K  G C P+  +YN L+   CK   +      L EM++ 
Sbjct: 293 LIDGYGKLGLLDESFCLFEEMKDVG-CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS 351

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   +  T + L+   C      +A+    ++   G   +E  ++ L+ A  K G +  A
Sbjct: 352 GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDA 411

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L + M    +  N  T+  L+ G  K+ R+ +A  LF  M K+G   +   Y  ++ G
Sbjct: 412 LKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHG 471

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNT 271
             KNK++E AL+L  E+K   I PD  +   +I     + +L     ++ E+ +   +  
Sbjct: 472 HIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEM-KACGIRA 530

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            +++    M      G   +A NLLQ M       D+GVE+ ++          +F ++I
Sbjct: 531 NSVIYTIRMDAYFKTGKTVEALNLLQEM------CDLGVEVTIV----------TFCVLI 574

Query: 332 NTLLKDGKLDLALSLFREMTQIGCM-QNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           + L K G ++ A+  F  M        NV +   LIDGLC +N +E + +L  EM++   
Sbjct: 575 DGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNM 634

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P      ++     + +D   ALN+  +M   G E  +   T L+  L +     +A  
Sbjct: 635 VPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARM 694

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           FL +M+ +G +PD +     +    ++  +D A+EL  ++
Sbjct: 695 FLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 6/250 (2%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   Y  ++  LC    ++  E  + EM+  G   +    T  +  Y  +G+  +AL++
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFV 181
             E+ D G  V    F +L+    K G V++A +   RM D N++ N    C  LI G  
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K + ++ A +LFD+M       D   Y  +I G  K+K  + AL + S M   G+  D  
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLH 674

Query: 242 ILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             + L+   S +G L    +    +   + +    +LC  ++R     GSID+A  L   
Sbjct: 675 AYTSLVWGLS-QGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDE 733

Query: 299 MIKGEPIADV 308
           ++K  P+ ++
Sbjct: 734 LLKKVPLDEL 743



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 3/195 (1%)

Query: 474 LIDIKRVDLALELFRDICA--HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           LI  +R+    ++F  + +  + C P    ++ + S   +   + EA   F+ M    + 
Sbjct: 155 LISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVF 214

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   + N  +    K+G  D +      M+     +  V TY  +I  +C  G    A  
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMV-GAGIAQSVFTYNIMIGYMCKEGDMVTAKS 273

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+++M++ G  P+ +T+ +LI G  K      +   F  MK+ G +PD+  + ALI+ F 
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333

Query: 652 SELNPPLAFEVLKEM 666
                P AF  L EM
Sbjct: 334 KYEQMPKAFHFLHEM 348


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 243/572 (42%), Gaps = 50/572 (8%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIER 160
           +T T L+  YC++G    A    + ++  G   D H ++  ++ + + G    AC L   
Sbjct: 75  HTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLL 134

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M          T+  L+ G      V +A+ +F  M   G A D+ +Y +++ GLC   +
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-------RDVNTMT 273
              A+ L ++  G G  P+  + + LI      G+L L + +I++         +V T T
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAI-DIFKGMQSKGCLPNVRTYT 253

Query: 274 -LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            L+C         +G +++A  L   MI+                  ++PN  ++  +I 
Sbjct: 254 QLICG-----FCKSGKVERAMVLYSRMIEA----------------GLAPNVVTYTTLIQ 292

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
               +G L+ A  L   M   G   N +    LID LC   R+EE+ + L  + + G K 
Sbjct: 293 GQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV 352

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                 SM   LC+     GA NL++K+  +G  P     + LI  LC+  K +EA   L
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            DM++ G   + V ++  I   +   R D    +   + A G  PDVV Y + I   C+ 
Sbjct: 413 NDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQD 472

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            R+ +AE +  +MI  G+ P++ TYN LI G+   G + QA   L  M++     P+  +
Sbjct: 473 GRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN-GCKPNDES 531

Query: 573 YTTLIDGLCIAGRP-----DDAIMLWNEMEEK------------GCAPNRITFMALITGL 615
           YT L+ GL +          D+I LW  ++ K             C+     +   I  L
Sbjct: 532 YTVLL-GLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL 590

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            K DR   A      M+   + P   V+  +I
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTCMI 622



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 224/523 (42%), Gaps = 33/523 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            + LL+A ++ G +     L  RM   N+     T+  LI+ +     +  A +    + 
Sbjct: 46  LNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRHLSSLL 101

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITP-DFEILSKLITSCSDEG 254
           ++G A D+  Y   + G C+      A +L+  M  +G   TP  +  L + +       
Sbjct: 102 RAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVR 161

Query: 255 ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGV 310
           E   +   +W D    D +  +++ +     L   G   +A  LL  AM KG        
Sbjct: 162 EAMAVFAGMWPDGCAPDSHVYSIMVHG----LCGAGRAGEAVALLTDAMGKG-------- 209

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      PN + ++ +I+     G L+LA+ +F+ M   GC+ NV  Y  LI G C
Sbjct: 210 ---------FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFC 260

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            S ++E +  L   M E+G  P   T  ++ +  C    +  A  L+  M   G  P   
Sbjct: 261 KSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEW 320

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +LI  LCKHG+  EA +FL  +VQ+G   + V Y++ I  L    + D A  L + I
Sbjct: 321 TCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI 380

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PD   Y+ +I GLC+  ++ EA  L N+MI  G+  +   + +LI+   +    
Sbjct: 381 ITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D   +   RM       PDV+TYT  I   C  GR +DA  +  +M + G  PN  T+  
Sbjct: 441 DSPKMISDRM-AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNT 499

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           LI G         A    + M + G KP+   +  L+   L +
Sbjct: 500 LIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 1/344 (0%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +IN     G L  A      + + G   +   Y + + G C +     +  L 
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M + G   T FT  ++ + LC    V  A+ +   M   G  P     ++++  LC  
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+A EA   LTD + +GF+P++  Y+A I G      ++LA+++F+ + + GC P+V  Y
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +I G CK+ +V  A  L++ MI  GL P+V TY  LI G C  G+++ A   L  M E
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM-E 311

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
               +P+  T   LID LC  GR ++A      + +KG   N++ + ++I  LCK  +  
Sbjct: 312 ACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD 371

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A    + +  +G  PD  ++ +LI     E     A  +L +M
Sbjct: 372 GAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 148/643 (23%), Positives = 262/643 (40%), Gaps = 74/643 (11%)

Query: 25  RCFMSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R  ++P +  +    LG    GL   A  LF  + + G C    ++Y  LL+ LC +  V
Sbjct: 102 RAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG-CARTPFTYAALLQGLCGAGMV 160

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSIL 141
                    M   G   D +  + ++   C +G+  +A+++  + +  G+V +  V++ L
Sbjct: 161 REAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNAL 220

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +  +   G+++ A ++ + M       N +T+  LI GF K  +V++A+ L+ +M ++G 
Sbjct: 221 IDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGL 280

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
           A +   Y  +I G C    LE A +L   M+  G+ P+      LI +    G +    +
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ 340

Query: 262 EIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
            +     + +    ++  S++  L  +G  D A+NL+Q +I                +G 
Sbjct: 341 FLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIIT---------------EGF 385

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+   +  +I+ L ++ KL  A+SL  +M + G   N   +  LID      R +   
Sbjct: 386 V-PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +   M  +G KP   T     R  C+   +  A +++ +M   G  P +     LIK  
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID--------------IKRVDLAL- 484
              G   +AF  L +M+  G  P+   Y+  +G L+                K VD+ + 
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVL 564

Query: 485 -ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA---------------EDLF------ 522
            EL  ++    C      Y+  I  L K  R+ EA               ED++      
Sbjct: 565 EELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC 624

Query: 523 --------------NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
                         + M+ +  +P + +Y  +I   C+ G+   A      +L KE    
Sbjct: 625 CYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNR- 683

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           D I +  LIDGL   G   D   L + MEE+ C P    +  L
Sbjct: 684 DEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 112/498 (22%), Positives = 217/498 (43%), Gaps = 46/498 (9%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++P  + +  LI+   S G +E A  L   ++  GL  PN ++   L++ALCK   ++  
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL-APNEWTCLVLIDALCKHGRIEEA 338

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
           +  L  +   G   ++   T ++   C SG+FD A ++  +II  G+V D H++S L+  
Sbjct: 339 QQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDG 398

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             +  ++ +A  L+  M +  ++ N   F +LI   +++ R D    + D+M  +G   D
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y V I   C++ ++E A  +  +M   G+ P+    + LI   ++ G    LV + +
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG----LVSQAF 514

Query: 265 EDRDVNTMTLLCNSIMRILVSNG--SIDQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVS 321
                        S ++ ++ NG    D++Y  LL  ++K     D+           V+
Sbjct: 515 -------------SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDL-----------VA 550

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            + S + I+   +L++        L  E+ ++ C    ++Y+  I  L   +RLEE+   
Sbjct: 551 DSISLWKIVDMKVLEE--------LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSF 602

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L  M+ +   P+      M  C  R + +  AL  +  M  + + P ++    +I  LC+
Sbjct: 603 LVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCE 662

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A     D++ + +  D + +   I GL+          L   +    C P    
Sbjct: 663 EGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAI 722

Query: 502 YNII---ISGLCKAQRVA 516
           Y+ +   I+   +AQ +A
Sbjct: 723 YSRLTGEITVTSEAQEIA 740


>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 155/672 (23%), Positives = 281/672 (41%), Gaps = 117/672 (17%)

Query: 33  LGFLIRCLGSVGLVEEA--NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           +GF+  C+G + + ++A   M   Q++R G+ +PN ++ N L+  L K   V++      
Sbjct: 161 VGFVKACVG-LNMFDDAIDFMFMFQIRRFGI-LPNIFACNFLINRLVKCDQVNMAFEIFD 218

Query: 91  EMQDYGWGYDKYTLTPLLQVY-CNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKW 148
            ++  G   + +T   +++      G   +A  VF+E+ + G   + + ++  +      
Sbjct: 219 RIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNN 278

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            + D   +L+  + + N  ++   +  +I GF  + ++DKA+Q+F  M       D  +Y
Sbjct: 279 HQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVY 338

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             +I G CK   L  AL LY +M   GI  +  I+S ++   ++ GE + +V    E   
Sbjct: 339 SSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKE--- 395

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                          +K   +   GV               +++
Sbjct: 396 -------------------------------VKQSGVFLDGV---------------AYN 409

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           I+ ++L K GK+D    +  ++  +    ++  Y   I G C   + +++Y + +EMEE 
Sbjct: 410 IVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEK 469

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           GFKP     N +   LC  + V  A++L+  M  QG +P    + ++I+  C  GK  EA
Sbjct: 470 GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC----------------- 491
             +   M  E     +  Y+A + G  +   ++ + ELF ++                  
Sbjct: 530 EGYFNSMKDES----VEIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSK 585

Query: 492 ---------------------------AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                                        G  PDVV Y I+I   C    + EA DLF +
Sbjct: 586 VLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQD 645

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQA--------------MLCLSRMLEKESGSPDV 570
           M ++G+ P V TY +L++G  K     +               +  + R ++    SPDV
Sbjct: 646 MKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDV 705

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           + YT LIDG       +DAI L+NE+ ++G  P+ +T+ AL +GL        A+  +  
Sbjct: 706 VIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNE 765

Query: 631 MKEKGMKPDMFV 642
           M  KGM P + +
Sbjct: 766 MSSKGMTPPLHI 777



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 152/629 (24%), Positives = 259/629 (41%), Gaps = 108/629 (17%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLC----------------------------- 62
           A  FLI  L     V  A  +FD++K  GLC                             
Sbjct: 196 ACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDE 255

Query: 63  ------VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
                  PN+Y Y   +E LC +   DL    L+ +++     D Y  T +++ +CN  +
Sbjct: 256 MKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMK 315

Query: 117 FDKALSVFNEIIDHGW----VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
            DKA+ VF    D  W     D HV+S L+  + K  ++ KA +L E M    I+ N   
Sbjct: 316 LDKAMQVF---YDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVI 372

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
              ++H F +     + +  F ++ +SG   D   Y+++   L K  +++    +  ++K
Sbjct: 373 VSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLK 432

Query: 233 GSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
              I  D +  +  I     +G   +  ++ KE+ E++      +  N +   L  N  +
Sbjct: 433 SMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEM-EEKGFKPDVVAYNVLAAGLCGNRHV 491

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A +LL  M                    V PN+++  III     +GK++ A   F  
Sbjct: 492 SEAMDLLNYMD----------------SQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNS 535

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M      ++V +Y  ++ G C ++ +E+SYEL  E+   G        ++     C +Q 
Sbjct: 536 MKD----ESVEIYTAMVSGYCEADLIEKSYELFHELSNRG--------DTAQESSCLKQ- 582

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
               L+ V   +V             + ELC+ G    A       +  GF PD+V Y+ 
Sbjct: 583 ----LSKVLYSKV-------------LAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTI 625

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE------------ 517
            I     +  +  A +LF+D+ + G  PDV+ Y +++ G  K  R  E            
Sbjct: 626 MIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDA 685

Query: 518 ---AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
                 ++ +M  + + P V  Y +LI+G  K  N + A+   + ++ K    PD +TYT
Sbjct: 686 PYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVM-KRGLEPDNVTYT 744

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            L  GL  +G  + A+ L+NEM  KG  P
Sbjct: 745 ALFSGLLNSGNSEIAVTLYNEMSSKGMTP 773



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/522 (22%), Positives = 217/522 (41%), Gaps = 105/522 (20%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL-CKNKQLEMALQLYSEMKGS 234
           LI+  VK  +V+ A ++FD++   G   +   Y +II  L  K   L+ A  ++ EMK +
Sbjct: 200 LINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEA 259

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           G+TP+    +  I     EG                    LCN        N   D  Y+
Sbjct: 260 GVTPNSYCYAAYI-----EG--------------------LCN--------NHQSDLGYD 286

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           LL+A+ +     DV                 ++  +I     + KLD A+ +F +M    
Sbjct: 287 LLRALRENNAPIDV----------------YAYTAVIRGFCNEMKLDKAMQVFYDMEWQR 330

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT--------------------- 393
            + +  +Y++LI G C ++ L ++ +L  +M   G K                       
Sbjct: 331 LVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVV 390

Query: 394 ------------------HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
                             +   +S+F+ L +  +V G L  ++ M +      +KH T  
Sbjct: 391 DTFKEVKQSGVFLDGVAYNIVFDSLFK-LGKMDEVAGMLEDLKSMHIDFD---IKHYTTF 446

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           IK  C  GK  +A+    +M ++GF PD+V Y+    GL   + V  A++L   + + G 
Sbjct: 447 IKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGV 506

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+   + III G C   ++ EAE  FN M  +    SV  Y  +++G+C++  I+++  
Sbjct: 507 KPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDE----SVEIYTAMVSGYCEADLIEKSYE 562

Query: 556 CLSRMLEKESGSPDV--------ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
               +  +   + +         + Y+ ++  LC  G    A  L++    +G  P+ +T
Sbjct: 563 LFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVT 622

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           +  +I   C  +  + A   F+ MK +G+KPD+  +  L+  
Sbjct: 623 YTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDG 664



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 6/346 (1%)

Query: 322 PNTSSFDIIINTL-LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           PN  ++ III  L  K G L  A  +F EM + G   N + Y   I+GLCN+++ +  Y+
Sbjct: 227 PNHHTYAIIIKALGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYD 286

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           LLR + E+      +   ++ R  C    +  A+ +   M  Q   P     + LI   C
Sbjct: 287 LLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYC 346

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K    ++A     DM+ +G   + V  S  +    ++      ++ F+++   G   D V
Sbjct: 347 KTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGV 406

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           AYNI+   L K  ++ E   +  ++ +  +   +  Y   I G+C  G  D+A +    M
Sbjct: 407 AYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEM 466

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            EK    PDV+ Y  L  GLC      +A+ L N M+ +G  PN  T   +I G C   +
Sbjct: 467 EEK-GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGK 525

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A  +F  MK++ ++    ++ A++S +        ++E+  E+
Sbjct: 526 IEEAEGYFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHEL 567



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 184/419 (43%), Gaps = 28/419 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++ C   +G        F +VK+ G+ + +  +YN + ++L K   +D V   L++++  
Sbjct: 376 ILHCFAEMGEDSRVVDTFKEVKQSGVFL-DGVAYNIVFDSLFKLGKMDEVAGMLEDLKSM 434

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
              +D    T  ++ YC  G+ DKA  +F E+ + G+  + V +++L         V +A
Sbjct: 435 HIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEA 494

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+  MD   ++ N  T  ++I GF  + ++++A   F+ M          +Y  ++ G
Sbjct: 495 MDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDES----VEIYTAMVSG 550

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFE---------ILSKLITSCSDEGELTLLVKEIWE 265
            C+   +E + +L+ E+   G T             + SK++     +G +    + +++
Sbjct: 551 YCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQR-ARSLFD 609

Query: 266 -------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                    DV T T++  S   +      + +A++L Q M       DV    +++   
Sbjct: 610 FFLGRGFTPDVVTYTIMIKSYCTM----NCLQEAHDLFQDMKSRGIKPDVITYTVLLDGK 665

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           +    +       +   KD   D++ +++R+M       +V +Y  LIDG    +  E++
Sbjct: 666 SKQARSKEHFSSQHGKGKDAPYDVS-TIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDA 724

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
             L  E+ + G +P + T  ++F  L    +   A+ L  +M  +G  P +  N  ++K
Sbjct: 725 IRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTPPLHINQRILK 783


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 235/532 (44%), Gaps = 19/532 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF  L       G +++A +   +M+   +    ++   L+H   K S+   AL  F  M
Sbjct: 183 VFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDM 242

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G +     Y+++IG L +   LE A  L+ EMK  G+ PD    + LI      G L
Sbjct: 243 VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGML 302

Query: 257 TLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           T  V    E +D       +  NS++        I QA+  L  M +             
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ------------- 349

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             +G + PN  ++  +I+   K G L  A   F +M ++G   N F Y +LID  C    
Sbjct: 350 --RG-LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L E+++L  EM+++G      T  ++   LC    +  A  L   +   G     +  T 
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           L     K     +A   L +M ++   PD++ Y   I GL     ++ ++ + R++   G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
              +   Y  +I    K  +  EA +L  EM   G+  +V TY +LI+G CK G + QA+
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                M  +    P+++ YT LIDGLC     ++A  L+NEM +KG +P+++ + +LI G
Sbjct: 587 RYFDHM-TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             K   P  AL     M E GM+ D+  + +LI  F       LA  +L EM
Sbjct: 646 NMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 247/582 (42%), Gaps = 21/582 (3%)

Query: 22  VKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
            ++ C    G    L   L  +G++EEA   F ++ +  + +P   S N LL  L KS  
Sbjct: 173 TRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRV-LPKVRSCNELLHRLSKSSK 231

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
             L     K+M   G     +T   ++      G  + A S+F E+   G   + V ++ 
Sbjct: 232 GGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNS 291

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
           L+  + K G +  A  + E M D     +  T+  LI+ F K  R+ +A +    M + G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
              +   Y  +I   CK   L  A + + +M   G+ P+    + LI +    G+L    
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411

Query: 261 K--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           K     +   VN   +   +++  L  +G + +A  L  A++K                 
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA---------------- 455

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
             + N   +  + +  +K   ++ A+ +  EM +     ++ LY   I GLC  N +E+S
Sbjct: 456 GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDS 515

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             ++REM + G     +   ++     +      A+NL+++M+  G +  V    +LI  
Sbjct: 516 MAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LCK G   +A R+   M + G  P+I+ Y+A I GL     ++ A  LF ++   G  PD
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
            + Y  +I G  K     EA  L N M+  G+   +  Y  LI G+ + G +  A   L 
Sbjct: 636 KLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLD 695

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            ML K    PD +    L+      G  ++A+ L ++M  +G
Sbjct: 696 EMLRK-GIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 1/356 (0%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           +ML   +    P    FD + N L+  G L+ A   F +M +   +  V   N L+  L 
Sbjct: 168 DMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLS 227

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            S++   +    ++M  +G  P+ FT N +  CL R  D+  A +L  +M+ +G  P + 
Sbjct: 228 KSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIV 287

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               LI    K G    A     +M   G  PD++ Y++ I      +R+  A E    +
Sbjct: 288 TYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  P+VV Y+ +I   CKA  + EA   F +MI  GL P+  TY  LI+  CK G++
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDL 407

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           ++A    S M ++   + +++TYT L+DGLC  GR  +A  L+  + + G   N+  + +
Sbjct: 408 NEAFKLESEM-QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L  G  K      A+     M +K +KPD+ ++   I     +     +  V++EM
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 225/493 (45%), Gaps = 19/493 (3%)

Query: 131 GWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
           G+    VF  L+ +       D+A E    M +  +    +T   L+  F+K +R + A 
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            L+ +M +    S    ++++I  LCK  +L+ A      M+ SG+ P+    + ++   
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 251 SDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
              G  E    +    + + +   +    S++  +   G +++A  + + M++       
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ------- 319

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                   KG + P+   ++ +I+     G LD+A +   EM + G    +  YN+LI  
Sbjct: 320 --------KG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           L    R +E+  +++E++E G  P   T N +    CR  +   A  L  +M   G +P 
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            K  T L+  L K  +  EA      +  EG LPD + ++A I G      V  A EL +
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+      PD V +N I+ G C+  +V EA +LF+EM  +G+ P   ++N LI+G+ + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +I  A    + ML+    +P V+TY  L+ GLC     D A  L  EM  KG  P+  T+
Sbjct: 551 DIKDAFRVRNEMLDT-GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 609 MALITGLCKCDRP 621
             LI G+ K + P
Sbjct: 610 FTLIEGIAKVNIP 622



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 145/571 (25%), Positives = 249/571 (43%), Gaps = 54/571 (9%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD--QVKREGLCVPNNYSYNCLLEALCK 78
           V+ +R      AL  L + LG  G       +F+     R+ L   ++  ++ L+++ C 
Sbjct: 105 VIVARLPSPKPALHLLRQALGG-GTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCD 163

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HV 137
               D        M++ G      T   LL ++    + + A  ++ E+         + 
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+I++    K G++ KA + +  M+   ++ N  T+  ++HG+    RV+ A  +   M 
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           +     D+  Y  +I G+CK  +LE A +++ EM   G+ P   I + LI          
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG-------- 335

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                             CN         G++D A      M+K               K
Sbjct: 336 -----------------FCN--------KGNLDMASAYKDEMLK---------------K 355

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G +SP  S+++ +I+ L  + + D A  + +E+ + G   +   YN LI+G C     ++
Sbjct: 356 G-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           ++ L  EM  SG KPT  T  S+   L ++  +  A +L +K+  +G  P       LI 
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             C +     AF  L DM +    PD V ++  + G     +V+ A ELF ++   G  P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D +++N +ISG  +   + +A  + NEM+  G  P+V TYN L+ G CK+   D A   L
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELL 594

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
             M+ K   +PD  TY TLI+G+     PD+
Sbjct: 595 KEMVSK-GMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 212/502 (42%), Gaps = 86/502 (17%)

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
           GF S + ++D +I   C   + + A + +  MK  G+ P  E                  
Sbjct: 147 GFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIET----------------- 188

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
                           CNS++ + +     + A+ L   M                F+  
Sbjct: 189 ----------------CNSLLSLFLKLNRTEAAWVLYAEM----------------FRLR 216

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +  +  +F+I+IN L K+GKL  A      M   G   N+  YN ++ G C+S R+E + 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +L  M+    +P  FT  S+   +C++  +  A  +  +M  +G  P       LI   
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C  G    A  +  +M+++G  P +  Y++ I  L   +R D A  + ++I   G  PD 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 500 VAYNIIISGLC-----------------------------------KAQRVAEAEDLFNE 524
           + YNI+I+G C                                   K  R+ EA+DLF +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           + ++G++P    +N LI+G C + N+  A   L  M ++    PD +T+ T++ G C  G
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREG 515

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + ++A  L++EM+ +G  P+ I+F  LI+G  +    + A      M + G  P +  + 
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
           AL+          LA E+LKEM
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEM 597



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 170/373 (45%), Gaps = 27/373 (7%)

Query: 15  RVLAQDVVKS---RCFMSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           RV A D + +   R  + P +   G LI  +   G +EEA+ +F+++ ++GL  P+   Y
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL-RPSAVIY 329

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L++  C   ++D+      EM   G      T   L+       + D+A  +  EI +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 130 HGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G   D   ++IL+  + +     KA  L + M    I+  +KT+  L+H   KK+R+ +
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF K+T  G   DA M++ +I G C N  ++ A +L  +M    + PD    + ++ 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 249 SCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
               EG++    +E++++   R +    +  N+++      G I  A+ +   M+     
Sbjct: 510 GHCREGKVEE-ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML----- 563

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            D G           +P   +++ ++  L K+ + DLA  L +EM   G   +   Y  L
Sbjct: 564 -DTGF----------NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 366 IDGLCNSNRLEES 378
           I+G+   N  +E+
Sbjct: 613 IEGIAKVNIPDEN 625


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 182/366 (49%), Gaps = 7/366 (1%)

Query: 291 QAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           Q YN+L     K   I D  +    I K  + P T SF+ +IN L K   LD    L + 
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M +     +VF Y+ LI GLC   RL+ + +L  EM++ G +P   T  ++    CR + 
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343

Query: 410 VVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +  A+N   +M   G +P  V +NTLL   LCK G   +A + + +M   G  PD + Y+
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLL-NGLCKVGDVNKARKLVDEMRMVGMKPDKITYT 402

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G      ++ A+E+ + +   G   D VA+  +ISG C+  RV +AE    EM+  
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P  ATY ++I+G+CK GN+      L  M +     P VITY  L++GLC  G+  +
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHKPGVITYNVLMNGLCKQGQMKN 521

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A ML   M   G  P+ IT+  L+ G CK  +    L   ++  EKG+  D   + +L+S
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL---KLRNEKGLIVDYAYYTSLVS 578

Query: 649 AFLSEL 654
            +   L
Sbjct: 579 EYNKSL 584



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 217/507 (42%), Gaps = 55/507 (10%)

Query: 118 DKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           D A SVF  I+D         VF  L++A+   G V  A +    + + N ++       
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY 193

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+   +  +        + ++ + GF      Y+++I   CK   +  A  +++E++  G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + P                                  T+  N+++  L  + ++D+ + L
Sbjct: 254 LRP---------------------------------TTVSFNTLINGLCKSRNLDEGFRL 280

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + M +                  + P+  ++ ++I+ L K+G+LD+A  LF EM Q G 
Sbjct: 281 KKTMEENR----------------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N   +  LIDG C S R++ +     +M   G KP     N++   LC+  DV  A  
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           LV +MR+ G +P     T LI   CK G    A      M +EG + D V ++A I G  
Sbjct: 385 LVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFC 444

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              RV  A    R++   G  PD   Y ++I G CK   V     L  EM   G  P V 
Sbjct: 445 RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN+L+NG CK G +  A + L  ML     +PD ITY  L++G C  G+ +D + L N 
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNL-GVTPDDITYNILLEGHCKNGKAEDLLKLRN- 562

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPR 622
             EKG   +   + +L++   K  + R
Sbjct: 563 --EKGLIVDYAYYTSLVSEYNKSLKDR 587



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 187/396 (47%), Gaps = 26/396 (6%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIF---KGTVSPNTSSFDII 330
           C SI+R LVS    D A ++  A++   G   ++   + LMI     G VS     F ++
Sbjct: 120 CQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV 179

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            N+               ++   GC         L+D + NSN     +    E+ E GF
Sbjct: 180 RNSNF-------------QIPFHGC-------GYLLDKMINSNSPVTIWTFYSEILEYGF 219

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N +    C+   +  A  +  ++R +G  P       LI  LCK     E FR
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M +    PD+  YS  I GL    R+D+A +LF ++   G  P+ + +  +I G C
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           +++R+  A + +++M+T G+ P +  YN L+NG CK G++++A   +  M       PD 
Sbjct: 340 RSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM-RMVGMKPDK 398

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           ITYTTLIDG C  G  + A+ +   M E+G   + + F ALI+G C+  R R A    R 
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M E GMKPD   +  +I  +  + N  + F++LKEM
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 170/409 (41%), Gaps = 53/409 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    YN L+   CK  S+   ++   E++  G      +   L+   C S   D+   +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              + ++  + D   +S+L+    K G +D A +L + M    +R N  TF  LI G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+D A+  + +M   G   D  MY+ ++ GLCK   +  A +L  EM+  G+ PD   
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI     EG+L                     S M I                  KG
Sbjct: 401 YTTLIDGYCKEGDL--------------------ESAMEIR-----------------KG 423

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                      M  +G V  N  +F  +I+   +DG++  A    REM + G   +   Y
Sbjct: 424 -----------MNEEGVVLDNV-AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +IDG C    ++  ++LL+EM+ +G KP   T N +   LC++  +  A  L+  M  
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            G  P      +L++  CK+GKA +  +      ++G + D   Y++ +
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 21/295 (7%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E    P+ ++Y+ L+  LCK   +D+ E    EMQ  G   +  T T L+   C S + D
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A++ +++++  G   + V ++ LL    K G+V+KA +L++ M    ++ ++ T+  LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G+ K+  ++ A+++   M + G   D   +  +I G C++ ++  A +   EM  +G+ 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYN 294
           PD    + +I     +G + +  K + ++  +N      +  N +M  L   G +  A  
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFK-LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           LL+AM+      ++G          V+P+  +++I++    K+GK +  L L  E
Sbjct: 525 LLEAML------NLG----------VTPDDITYNILLEGHCKNGKAEDLLKLRNE 563


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 200/378 (52%), Gaps = 10/378 (2%)

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVG-----VEMLM-IFKGTVSPNTSSFDIIINTLLK 336
           L+SN + ++A+ ++Q M+K    A++G     +EM++ +    ++P+T + + ++  + +
Sbjct: 122 LISNKNFEKAHEVMQCMVKS--FAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTE 179

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G ++ A +LF EM   G   N   Y  ++ G C    + ES   L  M E GF   + T
Sbjct: 180 MGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNAT 239

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           L+ + R  C +  V  AL   R+    G  P + + T +I+ LCK G   +AF  L +MV
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV 299

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRV 515
             G+ P++  ++A I GL      + A  LF + + +    P+V+ Y  +ISG C+ +++
Sbjct: 300 GRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKM 359

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
             AE L + M  +GL P+  TY  LI+G CK+GN ++A   ++ M E E  SP+V TY  
Sbjct: 360 NRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNE-EGFSPNVCTYNA 418

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           ++DGLC  GR  +A  +       G   +++T+  LI+  CK    + ALV F  M + G
Sbjct: 419 IVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSG 478

Query: 636 MKPDMFVFVALISAFLSE 653
           ++PD+  +  LI+ F  E
Sbjct: 479 IQPDIHSYTTLIAVFCRE 496



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 229/504 (45%), Gaps = 26/504 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           V   ++ +F++ G V +A E++  M +  +  + KT   ++    +   V+ A  LFD+M
Sbjct: 134 VMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEM 193

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   +   Y V++ G CK   +  + +    M   G   D   LS ++    ++G +
Sbjct: 194 CARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFV 253

Query: 257 TLLVKEIWEDRDVNTMTLLCNSI-----MRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           T   + +W  R    M L  N I     +  L   GS+ QA+ +L+ M+           
Sbjct: 254 T---RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVG---------- 300

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLC 370
                +G   PN  +   +I+ L K G  + A  LF ++ +    + NV  Y  +I G C
Sbjct: 301 -----RGW-KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 354

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              ++  +  LL  M+E G  P   T  ++    C+  +   A  L+  M  +G  P V 
Sbjct: 355 RDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVC 414

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               ++  LCK G+  EA++ L    + G   D V Y+  I        +  AL LF  +
Sbjct: 415 TYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKM 474

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G  PD+ +Y  +I+  C+ +R+ E+E  F E +  GL+P+  TY  +I G+C+ GN+
Sbjct: 475 VKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNL 534

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A+    RM +    S D ITY  LI GLC   + D+A  L++ M EKG  P  +T + 
Sbjct: 535 RLALKFFHRMSDHGCAS-DSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVT 593

Query: 611 LITGLCKCDRPRAALVHFRMMKEK 634
           L    CK D   +A+V    +++K
Sbjct: 594 LAYEYCKIDDGCSAMVVLERLEKK 617



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 249/539 (46%), Gaps = 31/539 (5%)

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSIL 141
           + +EM + EM + G      TL  ++++    G  + A ++F+E+   G     V + ++
Sbjct: 150 EAIEMVI-EMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVM 208

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           +V + K G V ++   +  M +    ++  T  +++  F +K  V +AL  F +  + G 
Sbjct: 209 VVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGL 268

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             +   +  +I GLCK   ++ A ++  EM G G  P+    + LI           L K
Sbjct: 269 RPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDG---------LCK 319

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ--AMIKG----EPIADVGVEMLMI 315
           + W ++       L  S           +   N+L   AMI G    E +    + +  +
Sbjct: 320 KGWTEKAFRLFLKLVRSE----------NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM 369

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            +  ++PNT+++  +I+   K G  + A  L   M + G   NV  YN ++DGLC   R+
Sbjct: 370 KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRV 429

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           +E+Y++L+    +G      T   +    C++ ++  AL L  KM   G +P +   T L
Sbjct: 430 QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTL 489

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I   C+  +  E+  F  + V+ G +P    Y++ I G      + LAL+ F  +  HGC
Sbjct: 490 IAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGC 549

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
             D + Y  +ISGLCK  ++ EA  L++ MI KGL P   T   L   +CK  +   AM+
Sbjct: 550 ASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMV 609

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            L R LEK+     V T  TL+  LC   +   A + ++++ +K    NR+T  A +T 
Sbjct: 610 VLER-LEKKLW---VRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTA 664



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 215/486 (44%), Gaps = 41/486 (8%)

Query: 189 ALQLFD-KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           AL  F+  +  S F     +Y      L  NK  E A                E++  ++
Sbjct: 95  ALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKA---------------HEVMQCMV 139

Query: 248 TSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKG-E 303
            S ++ G +   ++ + E  ++ +   T   N +++I+   G ++ A NL   M  +G +
Sbjct: 140 KSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQ 199

Query: 304 P------IADVGVEML------------MIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           P      +  VG   L            MI +G V  N ++  +I+    + G +  AL 
Sbjct: 200 PNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDN-ATLSLIVREFCEKGFVTRALW 258

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
            FR   ++G   N+  +  +I+GLC    +++++E+L EM   G+KP  +T  ++   LC
Sbjct: 259 YFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLC 318

Query: 406 RRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           ++     A  L  K+ R + H+P V   T +I   C+  K   A   L+ M ++G  P+ 
Sbjct: 319 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNT 378

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y+  I G       + A EL   +   G  P+V  YN I+ GLCK  RV EA  +   
Sbjct: 379 NTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
               GL     TY +LI+  CK   I QA++  ++M+ K    PD+ +YTTLI   C   
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMV-KSGIQPDIHSYTTLIAVFCREK 497

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R  ++ M + E    G  P   T+ ++I G C+    R AL  F  M + G   D   + 
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 645 ALISAF 650
           ALIS  
Sbjct: 558 ALISGL 563



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 177/369 (47%), Gaps = 24/369 (6%)

Query: 320 VSPNTSSFD---IIINTLLKDGKLDLALSLF---------REMTQ--IGCMQNVFLYNN- 364
           V PN+ + D    I+ +L  D    +ALS F         R  T+  I C  ++    N 
Sbjct: 69  VDPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNF 128

Query: 365 ---------LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
                    ++       R++E+ E++ EM   G  P+  TLN + + +     V  A N
Sbjct: 129 EKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAEN 188

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L  +M  +G +P      +++   CK G  +E+ R+L  M++ GF+ D    S  +    
Sbjct: 189 LFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFC 248

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           +   V  AL  FR  C  G  P+++ +  +I GLCK   V +A ++  EM+ +G  P+V 
Sbjct: 249 EKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVY 308

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           T+  LI+G CK G  ++A     +++  E+  P+V+TYT +I G C   + + A ML + 
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M+E+G APN  T+  LI G CK      A     +M E+G  P++  + A++     +  
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428

Query: 656 PPLAFEVLK 664
              A++VLK
Sbjct: 429 VQEAYKVLK 437



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 218/515 (42%), Gaps = 46/515 (8%)

Query: 29  SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
           S   L ++++ +  +GLVE A  LFD++   G+  PN  SY  ++   CK  +V   +  
Sbjct: 166 STKTLNWVVKIVTEMGLVEYAENLFDEMCARGV-QPNCVSYRVMVVGYCKLGNVLESDRW 224

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
           L  M + G+  D  TL+ +++ +C  G   +AL  F    + G     + F+ ++    K
Sbjct: 225 LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCK 284

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAA 206
            G V +A E++E M     + N  T   LI G  KK   +KA +LF K+ +S     +  
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIW 264
            Y  +I G C+++++  A  L S MK  G+ P+    + LI      G  E    +  + 
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            +   +      N+I+  L   G + +AY +L++                 F+  +  + 
Sbjct: 405 NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSG----------------FRNGLDADK 448

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I+I+   K  ++  AL LF +M + G   ++  Y  LI   C   R++ES     E
Sbjct: 449 VTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEE 508

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
               G  PT+ T  SM    CR  ++  AL    +M   G          LI  LCK  K
Sbjct: 509 AVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSK 568

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV---- 500
             EA      M+++G  P             ++ RV LA E  +     GC   VV    
Sbjct: 569 LDEARCLYDAMIEKGLTP------------CEVTRVTLAYEYCK--IDDGCSAMVVLERL 614

Query: 501 -------AYNIIISGLCKAQRVAEAEDLFNEMITK 528
                    N ++  LC  ++V  A   F++++ K
Sbjct: 615 EKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDK 649



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 205/463 (44%), Gaps = 30/463 (6%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
             L  ++R     G V  A   F +    GL  PN  ++ C++E LCK  SV      L+
Sbjct: 238 ATLSLIVREFCEKGFVTRALWYFRRFCEMGL-RPNLINFTCMIEGLCKRGSVKQAFEMLE 296

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKW 148
           EM   GW  + YT T L+   C  G  +KA  +F +++       +V  ++ ++  + + 
Sbjct: 297 EMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRD 356

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            ++++A  L+ RM +  +  N  T+  LI G  K    ++A +L + M + GF+ +   Y
Sbjct: 357 EKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTY 416

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           + I+ GLCK  +++ A ++      +G+              +D+   T+L+ E  +  +
Sbjct: 417 NAIVDGLCKKGRVQEAYKVLKSGFRNGLD-------------ADKVTYTILISEHCKQAE 463

Query: 269 VNTMTLLCNSIMRILVSNGSID-QAYNLLQAMIKGEPIADVGVEMLMIFKGTVS----PN 323
           +    +L N +++   S    D  +Y  L A+   E       E  M F+  V     P 
Sbjct: 464 IKQALVLFNKMVK---SGIQPDIHSYTTLIAVFCREKRMK---ESEMFFEEAVRFGLVPT 517

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++  +I    ++G L LAL  F  M+  GC  +   Y  LI GLC  ++L+E+  L  
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYD 577

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M E G  P   T  ++    C+  D   A+ ++ ++     + WV+    L+++LC   
Sbjct: 578 AMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLE---KKLWVRTVNTLVRKLCSER 634

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           K   A  F   ++ +    + V  +A +    +  + DL  +L
Sbjct: 635 KVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDL 677


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/584 (24%), Positives = 269/584 (46%), Gaps = 47/584 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           L  ++  EG+  P+  +YN  + A  K      ++DL+   +   +  G   D  T    
Sbjct: 132 LLREMPTEGV-TPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTE--GITPDVVTYNSA 188

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +    N G++ +A+ +  +++  G     + ++  + A +K    ++A +L+E + +   
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF 248

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             + +T+  +I    K  R  +A+ L  +M  +   +D   Y  +I    + ++ + A+ 
Sbjct: 249 PPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMD 308

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLC----- 276
           L  +M+  G++P+    +  I +C+          + W++     R++ T+ L+      
Sbjct: 309 LLEQMRTQGVSPNVISYNSAIDACAK--------GDRWKEALDLLREMTTVGLVPTVISY 360

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           NS       NG   +A  LL+ M    P   +            +PNT S++  ++   K
Sbjct: 361 NSATAACAVNGRWVEALELLKEM----PAQGI------------APNTISYNSALDACAK 404

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+ + A+ L R M+ +G   ++  +N+ ID      + E + ELLREM  +G  P   T
Sbjct: 405 GGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVIT 464

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAME-AFRFLTD 454
            NS      R      A+ L R+M  +G  P  V +N+++  + C  G+  E A + LT 
Sbjct: 465 YNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMI--DACAKGEQWELAVQLLTG 522

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G  PD++ Y++AI      ++ +LAL+L + +   G  PD+++YN  ++   K+ R
Sbjct: 523 MPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGR 582

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA  L  +M T GL P+  +Y   I+   K    D A+  L  M +    +P++ITY+
Sbjct: 583 WREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEM-QTHGATPNLITYS 641

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
             ID     GR  +A+ L  ++  +G  P+  T++ +I+   +C
Sbjct: 642 AAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRC 685



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 224/501 (44%), Gaps = 24/501 (4%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL   D+   SG + D   Y++ I      +Q   A++L  EM   G+TPD    +  I 
Sbjct: 94  ALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIA 153

Query: 249 SCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGE 303
           +CS  G     + LL + +     +    +  NS +    + G   +A +LL+ M+ +G 
Sbjct: 154 ACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGV 213

Query: 304 PI------ADVGV-------EMLM-----IFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           P       + +G        E  M     + +    P+T +++ +I+   K G+   A+ 
Sbjct: 214 PPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMD 273

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  +M       +V  Y+++I       R +E+ +LL +M   G  P   + NS      
Sbjct: 274 LLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACA 333

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           +      AL+L+R+M   G  P V            +G+ +EA   L +M  +G  P+ +
Sbjct: 334 KGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTI 393

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y++A+       + + A++L R +   G  PD++++N  I    + Q+   A +L  EM
Sbjct: 394 SYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREM 453

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            T GL P+V TYN  I    +S    +AM  L R +     SP+V+TY ++ID      +
Sbjct: 454 PTAGLTPNVITYNSAIEACGRSARWQEAM-GLFREMPTRGLSPNVVTYNSMIDACAKGEQ 512

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            + A+ L   M  +G AP+ I++ + I    K ++   AL   + M  +G KPD+  + +
Sbjct: 513 WELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNS 572

Query: 646 LISAFLSELNPPLAFEVLKEM 666
            ++A         A  +LK+M
Sbjct: 573 AVTACAKSGRWREALGLLKDM 593



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 28/366 (7%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS-VDLVEMRLKEMQDYGWGYDKYTLT 105
           +EA  L  ++   GL VP   SYN    A   +   V+ +E+ LKEM   G   +  +  
Sbjct: 339 KEALDLLREMTTVGL-VPTVISYNSATAACAVNGRWVEALEL-LKEMPAQGIAPNTISYN 396

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDD 163
             L      GQ++KA+ +   +   G  D  +  F+  + A  +  + + A EL+  M  
Sbjct: 397 SALDACAKGGQWEKAVKLLRGMSTVG-SDPDIISFNSAIDACGRGQQWETAVELLREMPT 455

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  N  T+   I    + +R  +A+ LF +M   G + +   Y+ +I    K +Q E+
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWEL 515

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           A+QL + M   G+ PD    +  I +C   ++ EL L + +    R      +  NS + 
Sbjct: 516 AVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
               +G   +A  LL+ M      A VG+          +PNT S+   I+   K  + D
Sbjct: 576 ACAKSGRWREALGLLKDM------ATVGL----------TPNTVSYGAAIHACGKGEQWD 619

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP---THFTLN 398
           +A+ + +EM   G   N+  Y+  ID      R +E+ +LL ++   G  P   T+ T+ 
Sbjct: 620 VAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVI 679

Query: 399 SMF-RC 403
           S F RC
Sbjct: 680 SAFQRC 685


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/656 (25%), Positives = 286/656 (43%), Gaps = 77/656 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           ++R L  +G V++A   F  ++ +   + P+   YN LL +  +      V     +M  
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
                  YT   L+   C S  FD AL +F ++   G   +E    IL+    + G V +
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL+   + C I  N   +  L+  F ++   ++A +L ++M + G   D   ++  I 
Sbjct: 204 ALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRIS 262

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            LC+  ++  A +++ +M+                    + EL L           N +T
Sbjct: 263 ALCRAGKVMEASRIFRDMQM-------------------DAELGL--------PRPNVVT 295

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS---FDII 330
              N +++    +G +  A  L++ M K      VG             N  S   ++I 
Sbjct: 296 F--NLMLKGFCKHGMMGDARGLVETMKK------VG-------------NFDSLECYNIW 334

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           +  LL++G+L  A  +  EM   G   N + YN ++DGLC ++ L ++  L+  M  +G 
Sbjct: 335 LMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGV 394

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     +++    C R  V  A +++ +M   G +P       L+  L K G+ +EA  
Sbjct: 395 YPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEE 454

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG---------------- 494
            L  M ++ + PD V  +  + GL     +D A E+  ++  +G                
Sbjct: 455 MLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINS 514

Query: 495 ------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
                 C PD + Y  +I+GLCK  R+ EA+  F EM+ K L P   TY+  I  +CK G
Sbjct: 515 IHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQG 574

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            I  A   L  M E+   S  + TY  LI GL    +  +   L +EM+EKG +P+  T+
Sbjct: 575 KISSAFRVLKDM-ERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTY 633

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             +IT LC+  + + A+     M +KG+ P++  F  LI AF    +  +A E+ +
Sbjct: 634 NNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 223/519 (42%), Gaps = 38/519 (7%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +LIH   +    D ALQLF+KM + G   +     +++ GLC+   ++ AL+L +  
Sbjct: 152 TFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNN 211

Query: 232 KGSGITPDFEILSKLITSCSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
               I       + +   C +E   E   LV+ + E   V    +  NS +  L   G +
Sbjct: 212 NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNE-LGVLPDVVTFNSRISALCRAGKV 270

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A  + + M   +  A++G+           PN  +F++++    K G +  A  L   
Sbjct: 271 MEASRIFRDM---QMDAELGLP---------RPNVVTFNLMLKGFCKHGMMGDARGLVET 318

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M ++G   ++  YN  + GL  +  L E+  +L EM   G +P  +T N M   LCR   
Sbjct: 319 MKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHM 378

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L+  M   G  P     + L+   C  GK  EA   L +M++ G  P+    + 
Sbjct: 379 LSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNT 438

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            +  L    R   A E+ + +      PD V  NI+++GLC+   + +A ++ +EM T G
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG 498

Query: 530 ----------------------LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
                                  +P   TY  LING CK G +++A      ML K    
Sbjct: 499 PTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNL-R 557

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           PD +TY T I   C  G+   A  +  +ME  GC+    T+ ALI GL   ++       
Sbjct: 558 PDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGL 617

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              MKEKG+ PD+  +  +I+          A  +L EM
Sbjct: 618 KDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEM 656



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 151/625 (24%), Positives = 265/625 (42%), Gaps = 55/625 (8%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLC-VPNNYSYNCLLEALCKSCSVDLVEMRLK 90
            LG L+R L   GLV++A    + V     C + N   YN L+   C+    +  E  ++
Sbjct: 187 TLGILVRGLCRAGLVKQA---LELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVE 243

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI---IDHGWVDEHV--FSILLVAF 145
            M + G   D  T    +   C +G+  +A  +F ++    + G    +V  F+++L  F
Sbjct: 244 RMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGF 303

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G +  A  L+E M       + + + + + G ++   + +A  + D+M   G   +A
Sbjct: 304 CKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNA 363

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVK 261
             Y++++ GLC+N  L  A  L   M  +G+ PD    S L+      G++    ++L +
Sbjct: 364 YTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHE 423

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
            I      NT T  CN+++  L   G   +A  +LQ M                 +    
Sbjct: 424 MIRNGCQPNTYT--CNTLLHSLWKEGRTLEAEEMLQKM----------------NEKCYQ 465

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG----------------------CMQNV 359
           P+T + +I++N L ++G+LD A  +  EM   G                      C+ + 
Sbjct: 466 PDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDG 525

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  LI+GLC   RLEE+ +   EM     +P   T ++     C++  +  A  +++ 
Sbjct: 526 ITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKD 585

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G    ++    LI  L  + +  E +    +M ++G  PDI  Y+  I  L +  +
Sbjct: 586 MERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGK 645

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              A+ L  ++   G  P+V ++ I+I    K+     A +LF E+         A Y+L
Sbjct: 646 AKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSL 704

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           + N     G + +A       L++     + + Y  LI  LC   R  DA  L  ++ +K
Sbjct: 705 MFNELLAGGQLSEAKELFEVSLDRYLTLKNFM-YKDLIARLCQDERLADANSLLYKLIDK 763

Query: 600 GCAPNRITFMALITGLCKCDRPRAA 624
           G   +  +FM +I GL K    R A
Sbjct: 764 GYGFDHASFMPVIDGLSKRGNKRQA 788



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 175/442 (39%), Gaps = 96/442 (21%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF------------------- 360
           V+P T +F+++I++L +    D AL LF +M Q GC  N F                   
Sbjct: 146 VAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL 205

Query: 361 ---------------LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
                          +YN L+   C      E+  L+  M E G  P   T NS    LC
Sbjct: 206 ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265

Query: 406 RRQDVVGALNLVRKMRVQGH----EPWVKHNTLLIKELCKHG------------------ 443
           R   V+ A  + R M++        P V    L++K  CKHG                  
Sbjct: 266 RAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF 325

Query: 444 -----------------KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
                            + +EA   L +MV +G  P+   Y+  + GL     +  A  L
Sbjct: 326 DSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              +  +G  PD VAY+ ++ G C   +V EA+ + +EMI  G  P+  T N L++   K
Sbjct: 386 MDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWK 445

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG------ 600
            G   +A   L +M EK    PD +T   +++GLC  G  D A  + +EM   G      
Sbjct: 446 EGRTLEAEEMLQKMNEK-CYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 601 ----------------CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
                           C P+ IT+  LI GLCK  R   A   F  M  K ++PD   + 
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
             I +F  +     AF VLK+M
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDM 586


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 230/470 (48%), Gaps = 28/470 (5%)

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK- 261
           + + +Y+V+I    +++ L+ ++  ++EM   G  P     + L+T            + 
Sbjct: 92  TKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRF 151

Query: 262 ----EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
               +I  D DV +  +    +++     G I+++++LL             VE+     
Sbjct: 152 FNESKIKVDLDVYSFGI----VIKGCCEAGEIEKSFDLL-------------VELREF-- 192

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              SPN   +  +I+   K G+++ A  LF EM + G + N + Y  LI GL  +   ++
Sbjct: 193 -GFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLI 436
            +E+  +M+E G  P  +T N +    C+      A  L  +MR +G     V +NTL I
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTL-I 310

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC+  KA EA + +  M  +G  P+++ Y+  I G   + ++  AL L RD+ + G  
Sbjct: 311 GGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P +V YNI++SG CK    + A  +  EM  +G+ PS  TY +LI+ + +  N+++A+  
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            S M E+   +PDV TY+ LI G CI G+ ++A  L+  M  K   PN++ +  ++ G C
Sbjct: 431 RSPM-EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYC 489

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K      AL  FR M+EK + P++  +  +I     E     A  ++++M
Sbjct: 490 KEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 230/505 (45%), Gaps = 64/505 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV------AFSKWGEVDKACELIE 159
           ++  Y  S   D ++S FNE++D G+V   + F+ LL       +F++W       ++  
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKI-- 157

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                 + L+  +F ++I G  +   ++K+  L  ++ + GF+ +  +Y  +I G CK  
Sbjct: 158 -----KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A  L+ EM                      G+  L+  E W      T T+L + +
Sbjct: 213 EIEKAKDLFFEM----------------------GKFGLVANE-W------TYTVLIHGL 243

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    NG   Q + + + M +                  V PN  +++ ++N   KDG+
Sbjct: 244 FK----NGIKKQGFEMYEKMQED----------------GVFPNLYTYNCVMNQHCKDGR 283

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A  LF EM + G   N+  YN LI GLC   +  E+ +++ +M+  G  P   T N+
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    +  AL+L R ++ +G  P +    +L+   CK G    A + + +M + G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P  + Y+  I     +  ++ A++L   +   G  PDV  Y+++I G C   ++ EA 
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF  M+ K L P+   YN ++ G+CK G+  +A+     M EKE   P+V +Y  +I+ 
Sbjct: 464 RLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL-PPNVASYRYMIEV 522

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPN 604
           LC   +  +A  L  +M + G  P+
Sbjct: 523 LCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 212/473 (44%), Gaps = 16/473 (3%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  ++ A  +S S+D       EM D G+         LL     S  F++    FNE  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
               +D + F I++    + GE++K+ +L+  + +     N   +  LI G  K+  ++K
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF +M K G  ++   Y V+I GL KN   +   ++Y +M+  G+ P+    + ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
               +G      K   E R+     + CN +             YN L   +  E  A+ 
Sbjct: 277 QHCKDGRTKDAFKLFDEMRE---RGVSCNIV------------TYNTLIGGLCREMKANE 321

Query: 309 GVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
             +++   K   ++PN  +++ +I+     GKL  ALSL R++   G   ++  YN L+ 
Sbjct: 322 ANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C       + ++++EMEE G KP+  T   +     R  ++  A+ L   M   G  P
Sbjct: 382 GFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTP 441

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   ++LI   C  G+  EA R    MV +   P+ V Y+  + G         AL LF
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLF 501

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           R++      P+V +Y  +I  LCK ++  EAE L  +MI  G+ PS +  NL+
Sbjct: 502 REMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 184/399 (46%), Gaps = 19/399 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YS+  +++  C++  ++     L E++++G+  +    T L+   C  G+ +KA  +F E
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFE 223

Query: 127 IIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G V +E  +++L+    K G   +  E+ E+M +  +  N  T+  +++   K  R
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGR 283

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
              A +LFD+M + G + +   Y+ +IGGLC+  +   A ++  +MK  GI P+    + 
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGE 303
           LI      G+L    K +   RD+ +  L  + +             YN+L +    KG+
Sbjct: 344 LIDGFCGVGKLG---KALSLCRDLKSRGLSPSLV------------TYNILVSGFCKKGD 388

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                 V   M  +G + P+  ++ I+I+T  +   ++ A+ L   M ++G   +V  Y+
Sbjct: 389 TSGAGKVVKEMEERG-IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYS 447

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI G C   ++ E+  L + M     +P     N+M    C+      AL L R+M  +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
              P V     +I+ LCK  K+ EA   +  M+  G  P
Sbjct: 508 ELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 183/399 (45%), Gaps = 33/399 (8%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G +I+     G +E++  L  +++  G   PN   Y  L++  CK   ++  +    E
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFS-PNVVIYTTLIDGCCKRGEIEKAKDLFFE 223

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M  +G   +++T T L+     +G   +   ++ ++ + G + + + ++ ++    K G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGR 283

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A +L + M +  +  N  T+  LI G  ++ + ++A ++ D+M   G   +   Y+ 
Sbjct: 284 TKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR 267
           +I G C   +L  AL L  ++K  G++P     + L++    +G+ +    +VKE+ E+R
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM-EER 402

Query: 268 DVN----TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI-------- 315
            +     T T+L ++  R+     ++++A  L   M +     DV    ++I        
Sbjct: 403 GIKPSKITYTILIDTFARM----DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458

Query: 316 -------FKGTVSPNTSSFDIIINTLL----KDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                  FK  V+       +I NT++    K+G    AL LFREM +     NV  Y  
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           +I+ LC   + +E+  L+ +M ++G  P+   LN + R 
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     VG + +A  L   +K  GL  P+  +YN L+   CK          +KEM++ 
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLS-PSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G    K T T L+  +      +KA+ + + + + G   D H +S+L+  F   G++++A
Sbjct: 403 GIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEA 462

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M    +  N+  +  ++ G+ K+    +AL+LF +M +     + A Y  +I  
Sbjct: 463 SRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           LCK ++ + A  L  +M  +GI P   IL+ LI+   ++  ++
Sbjct: 523 LCKERKSKEAEGLVEKMIDTGIDPSDSILN-LISRAKNDSHVS 564


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 226/486 (46%), Gaps = 22/486 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  S+N LL         ++V   L+EM+  G   +  T   +L   C     DKA+S 
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSY 185

Query: 124 FNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           FN +  +        +++L+    K  +V++AC++ E M     + +   +  LI G  K
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RVD+A +L D M   G    A  Y  I+ GLCK  +++ A++   EM+   + P  + 
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 305

Query: 243 LSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            S ++T     G  E    V E   DRD    T+     +  L S G  ++A  + + M+
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 365

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +               KG   P+  ++ III+   K+G +  A  + R M +     N +
Sbjct: 366 E---------------KG-CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 409

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           +Y  ++DG   S+RLEE+ EL + + + G  P+  T N++   LC+ + +  AL L+R+M
Sbjct: 410 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 469

Query: 421 --RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
             R +  EP +   +++I  L K G    AF  L +M+  G +PD   Y++ I  L    
Sbjct: 470 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 529

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           +V  A+EL  ++   G  PD   Y  ++  LC++  V  A DL  EM+  G  P+  T+ 
Sbjct: 530 KVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFK 588

Query: 539 LLINGW 544
            +  G+
Sbjct: 589 AVEKGF 594



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 222/524 (42%), Gaps = 24/524 (4%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G+ +  +T   LL      G    AL  F   I    V    F+ILL  F+   + +   
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSS--FNILLRGFAARDDFEVVN 148

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L+  M    I  N  T  V++     +  +DKA+  F+ ++ +        Y V++ GL
Sbjct: 149 ALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGL 208

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMT 273
           CK  ++E A  ++ EM   G  PD    S LI   S  G +    K  ++   R      
Sbjct: 209 CKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTA 268

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +   SI+  L   G I +A   +Q M +      V              +T SF  I+  
Sbjct: 269 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV--------------DTYSF--IVTG 312

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
            +  GK++ A ++  EM    C  +   Y   I+ L +  R EE+ ++   M E G KP 
Sbjct: 313 YIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 372

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T   +    C+   +  A +++R M     +P     T+++    K  +  EA     
Sbjct: 373 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 432

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG--CCPDVVAYNIIISGLCK 511
            ++++G LP  V Y+  I  L  +K++D ALEL R++        P +V Y++II GL K
Sbjct: 433 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 492

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
                 A DL  EMI  G+IP   TY  LI     +G + +AM  L  ML K    PD  
Sbjct: 493 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML-KAGIFPDDH 551

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           TY TL+  LC +   D A  L  EM   G  PN  TF A+  G 
Sbjct: 552 TYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 198/411 (48%), Gaps = 43/411 (10%)

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVS-PNTSSFDI------------IINTLLKDGK- 339
           +LL A+++G  ++D     L  F+ ++S PN SSF+I            ++N LL++ K 
Sbjct: 101 SLLLALVRGGHLSDA----LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKS 156

Query: 340 ----------------------LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
                                 LD A+S F  ++   C   +F Y  L+DGLC ++++E 
Sbjct: 157 RGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVER 216

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + ++  EM   G+KP     +S+   L +   V  A  LV  M  +G  P     T ++ 
Sbjct: 217 ACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVA 276

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK G+  EA + + +M +    P +  YS  + G I + +V+ A  +  ++    C P
Sbjct: 277 GLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAP 336

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D ++Y + I  L    R  EAE +F  M+ KG  P + TY ++I+ +CK G++  A   L
Sbjct: 337 DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL 396

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            R+++K +  P+   YT ++DG   + R ++A+ L+  + + G  P+ +T+  +I  LCK
Sbjct: 397 -RLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 455

Query: 618 CDRPRAALVHFRMMKEKG--MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +   AL   R M+ +   ++P +  +  +I           AF++L EM
Sbjct: 456 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 506



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 200/459 (43%), Gaps = 24/459 (5%)

Query: 22  VKSRCFMSPGAL-GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +KSR   S GA  G ++  L +   +++A   F+ V     C P  ++Y  L++ LCK+ 
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVS-PNKCEPTLFTYTVLVDGLCKAH 212

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
            V+      +EM   G+  D    + L+     +G+ D+A  + + ++  G     V ++
Sbjct: 213 KVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYT 272

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            ++    K G + +A + I+ M    +R    T+  ++ G++   +V+KA  + ++M   
Sbjct: 273 SIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADR 332

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
             A D   Y + I  L    + E A +++  M   G  PD      +I +   EG +   
Sbjct: 333 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 392

Query: 260 --VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
             V  + +   V     +   IM   V +  +++A  L Q                 I K
Sbjct: 393 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ----------------RILK 436

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG--CMQNVFLYNNLIDGLCNSNRL 375
             + P+T +++ +IN L K  K+D AL L REM +       ++  Y+ +I GL      
Sbjct: 437 DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 496

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           E +++LL EM ++G  P  FT  S+ + L     V  A+ L+ +M   G  P       L
Sbjct: 497 ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTL 556

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           ++ LC+      A+  L +M++ G  P+   + A   G 
Sbjct: 557 VQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 250/589 (42%), Gaps = 75/589 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +      ++ + Q++    C +  G L   I       L EE   + + ++ E     
Sbjct: 97  LGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLAL 156

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   YN LL  L     + LVE     M   G   D  T   L++  C + Q   A+ V 
Sbjct: 157 DTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVM 216

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
            E+  +G V DE  F+ L+  F + G +D A  + E+M D    +   T  VL+HGF K+
Sbjct: 217 EEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKE 276

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R+++AL   D+M+  G                   +  MA++LY+EMK  G  PD    
Sbjct: 277 GRIEEALSFIDEMSNEG-------------------KHTMAIELYNEMKNKGCQPDEFTY 317

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKG 302
           + LI S                                 L   G + +A  LL+ M I G
Sbjct: 318 NMLIDS---------------------------------LCYRGKLQEALGLLREMEISG 344

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                             + N  +++ +I+   K+ K++ A  +F +M   G  +N   Y
Sbjct: 345 -----------------CARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTY 387

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LIDGLC S R++E+ +L+ +M   G KP  FT NSM    CR  D+  A ++V+ M  
Sbjct: 388 NTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTS 447

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G EP +     LI  LCK G+   A R L  +  +G +     Y+  I  L   KR   
Sbjct: 448 NGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKE 507

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKA-QRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           A+ LFR++   G  PD   Y I+  GL  +   + EA D   EMI KG +P  +++ +L 
Sbjct: 508 AMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLA 567

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            G C     D  +  +  ++EK + S + +    +I G     +  DA+
Sbjct: 568 EGLCSLSMEDTLIKLVDLVMEKANFSQNEV---VMIRGFLKIRKFQDAL 613



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 223/511 (43%), Gaps = 70/511 (13%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           +  ++  +L    K G  +   ++++ M   + +++     + I  + K    ++ L + 
Sbjct: 86  NSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIV 145

Query: 194 DKM-TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           + M  + G A D  +Y+ ++  L    +L++   ++S M   GI PD    + LI +   
Sbjct: 146 EVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKA--- 202

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
                                 LC              +A+ +  A++  E ++  G+  
Sbjct: 203 ----------------------LC--------------KAHQIRPAILVMEEMSSYGL-- 224

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                    P+  +F  ++   +++G +D A  +  +M   GC       N L+ G C  
Sbjct: 225 --------VPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKE 276

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            R+EE+   + EM   G K T                   A+ L  +M+ +G +P     
Sbjct: 277 GRIEEALSFIDEMSNEG-KHTM------------------AIELYNEMKNKGCQPDEFTY 317

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI  LC  GK  EA   L +M   G   +++ Y+  I G    K+++ A E+F  +  
Sbjct: 318 NMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI 377

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   + V YN +I GLCK++RV EA  L ++MI +GL P   TYN ++  +C+ G+I +
Sbjct: 378 QGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQK 437

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A   +  M       PD++TY TLI GLC AGR + A  L   ++ KG       +  +I
Sbjct: 438 AADIVQTMTSN-GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVI 496

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
             L K  R + A+  FR M+EKG  PD F +
Sbjct: 497 QALFKRKRTKEAMRLFREMEEKGNTPDAFTY 527



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 198/450 (44%), Gaps = 50/450 (11%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN--TMTLLCNSIMR 281
           + Q ++    S  TP  ++L  L     +   L LL    W  +  N    + +   I+R
Sbjct: 40  STQQHTATLSSNFTPA-QLLDTLRRQNDETAALRLLS---WASKQPNFRPNSSIYEEILR 95

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP------------------- 322
            L   GS +   ++LQ M   +   D GV  L+IF  + +                    
Sbjct: 96  KLGKVGSFNSMKDILQEMKGLDCQIDRGV--LLIFIDSYAKFELYEEILCIVEVMEVEFG 153

Query: 323 ---NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
              +T  ++ ++N L+   KL L  ++   M   G   +V  +N LI  LC ++++  + 
Sbjct: 154 LALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAI 213

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            ++ EM   G  P   T  ++ +      ++ GA  +  +M   G         +L+   
Sbjct: 214 LVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGF 273

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+  EA  F+ +M  EG                   +  +A+EL+ ++   GC PD 
Sbjct: 274 CKEGRIEEALSFIDEMSNEG-------------------KHTMAIELYNEMKNKGCQPDE 314

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             YN++I  LC   ++ EA  L  EM   G   +V TYN LI+G+CK+  I++A     +
Sbjct: 315 FTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQ 374

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M E +  S + +TY TLIDGLC + R  +A  L ++M  +G  P++ T+ +++T  C+  
Sbjct: 375 M-EIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREG 433

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             + A    + M   G +PD+  +  LI  
Sbjct: 434 DIQKAADIVQTMTSNGCEPDIVTYGTLIGG 463



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 18/362 (4%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN+S ++ I+  L K G  +    + +EM  + C  +  +    ID        EE   +
Sbjct: 85  PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCI 144

Query: 382 LREME-ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +  ME E G        N +   L     +    N+   M  +G +P V    +LIK LC
Sbjct: 145 VEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALC 204

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  +   A   + +M   G +PD   ++  + G I+   +D A  +   +   GC    V
Sbjct: 205 KAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNV 264

Query: 501 AYNIIISGLCKAQRVAEAE----------------DLFNEMITKGLIPSVATYNLLINGW 544
             N+++ G CK  R+ EA                 +L+NEM  KG  P   TYN+LI+  
Sbjct: 265 TVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSL 324

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
           C  G + +A L L R +E    + +VITY TLIDG C   + ++A  ++++ME +G + N
Sbjct: 325 CYRGKLQEA-LGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRN 383

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
            +T+  LI GLCK  R + A      M  +G+KPD F + ++++ F  E +   A ++++
Sbjct: 384 SVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQ 443

Query: 665 EM 666
            M
Sbjct: 444 TM 445


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 212/459 (46%), Gaps = 32/459 (6%)

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +   V++  +D+AL+L      S    DA     +I  L  + +   A ++ +       
Sbjct: 74  LRSLVRRGELDEALRLVG----SARRPDAGTCAALIKKLSASGRTAEARRVLA-----AC 124

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            PD    + ++      G++    +    +R V      C++++R L   G    A  +L
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDA-ARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 297 QAMIKGEPIADVGVEMLMIFKGTV--------------------SPNTSSFDIIINTLLK 336
             M++   + DV V   ++ + T                     +P+  ++++++N + +
Sbjct: 184 DEMLRRRCVPDV-VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +G++D A+   + +   GC  N   YN ++ GLC + R E++ EL+ EM + G  P   T
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +   LCR+  V  AL ++ ++   G  P       L+   CK  K  +A  FL  MV
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PDIV Y+  +  L     VD+A+EL   +   GC P +++YN +I GL KA +  
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA +L NEM++KGL P + TY+ +  G C+   I+ A+    + ++     P+ + Y  +
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK-VQDMGIRPNTVLYNAI 481

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           I GLC       AI L+  M   GC PN  T+  LI GL
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 211/433 (48%), Gaps = 27/433 (6%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L +  +L+ AL+L     GS   PD    + LI   S  G          E R       
Sbjct: 77  LVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTA-------EAR------- 118

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
                 R+L + G    AYN + A   G    D         +  V  +  + D +I  L
Sbjct: 119 ------RVLAACGPDVMAYNAMMAGYCGAGQVDAARRWCA--ERAVERDAYTCDTLIRGL 170

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G+   AL++  EM +  C+ +V  Y  L++  C  +  +++ +LL EM + G  P  
Sbjct: 171 CGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI 230

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +   +C+   V  A+  ++ +   G EP      +++K LC   +  +A   + +
Sbjct: 231 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 290

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M Q+G  P++V ++  I  L     V+ ALE+   I  +GC P+ ++YN ++   CK ++
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A    + M+++G  P + +YN L+   C+SG +D A+  L ++ +K   +P +I+Y 
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC-APVLISYN 409

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           T+IDGL  AG+  +A+ L NEM  KG  P+ IT+  +  GLC+ DR   A+  F  +++ 
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 635 GMKPDMFVFVALI 647
           G++P+  ++ A+I
Sbjct: 470 GIRPNTVLYNAII 482



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 206/456 (45%), Gaps = 25/456 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE-LI 158
           D  T   L++    SG+  +A  V          D   ++ ++  +   G+VD A     
Sbjct: 97  DAGTCAALIKKLSASGRTAEARRVLAAC----GPDVMAYNAMMAGYCGAGQVDAARRWCA 152

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           ER     +  +  T   LI G   + R   AL + D+M +     D   Y +++   CK 
Sbjct: 153 ERA----VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 208

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
              + A++L  EM+  G TPD    + ++     EG +   ++ +   +++ +     N+
Sbjct: 209 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL---KNLPSYGCEPNT 265

Query: 279 IMRILVSNGSIDQAYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +            +YN+ L+ +   E   D    M  + +    PN  +F+++I+ L + 
Sbjct: 266 V------------SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G ++ AL +  ++ + GC  N   YN L+   C   +++++   L  M   G  P   + 
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++   LCR  +V  A+ L+ +++ +G  P +     +I  L K GK  EA   L +MV 
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  PDI+ YS    GL    R++ A+  F  +   G  P+ V YN II GLCK +    
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           A DLF  MI  G +P+ +TY +LI G    G I +A
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 9/356 (2%)

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
           E L +      P+  +   +I  L   G+   A  +        C  +V  YN ++ G C
Sbjct: 85  EALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMMAGYC 139

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            + +++ +    R   E   +   +T +++ R LC R     AL ++ +M  +   P V 
Sbjct: 140 GAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVV 196

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T+L++  CK     +A + L +M  +G  PDIV Y+  + G+    RVD A+E  +++
Sbjct: 197 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 256

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            ++GC P+ V+YNI++ GLC A+R  +AE+L  EM  KG  P+V T+N+LI+  C+ G +
Sbjct: 257 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 316

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           + A+  L + + K   SP+ ++Y  L+   C   + D A+   + M  +GC P+ +++  
Sbjct: 317 EPALEVLEQ-IPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+T LC+      A+     +K+KG  P +  +  +I           A E+L EM
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 218/500 (43%), Gaps = 59/500 (11%)

Query: 31  GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           G    LI+ L + G   EA  +         C P+  +YN ++   C +  VD      +
Sbjct: 99  GTCAALIKKLSASGRTAEARRVL------AACGPDVMAYNAMMAGYCGAGQVDAAR---R 149

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
              +     D YT   L++  C  G+   AL+V +E++    V + V ++ILL A  K  
Sbjct: 150 WCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 209

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
              +A +L++ M D     +  T+ V+++G  ++ RVD A++    +   G   +   Y+
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +++ GLC  ++ E A +L  EM   G  P+    + LI+                     
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS--------------------- 308

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                        L   G ++ A  +L+                 I K   SPN+ S++ 
Sbjct: 309 ------------FLCRKGLVEPALEVLE----------------QIPKYGCSPNSLSYNP 340

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +++   K  K+D A++    M   GC  ++  YN L+  LC S  ++ + ELL ++++ G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   + N++   L +      AL L+ +M  +G +P +   + +   LC+  +  +A 
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           R    +   G  P+ V Y+A I GL   +    A++LF  +  +GC P+   Y I+I GL
Sbjct: 461 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520

Query: 510 CKAQRVAEAEDLFNEMITKG 529
                + EA DL +E+ ++G
Sbjct: 521 AYEGLIKEARDLLDELCSRG 540



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 181/441 (41%), Gaps = 42/441 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G    A  + D++ R   CVP+  +Y  LLEA CK          L EM+D 
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   ++   C  G+ D A+     +  +G     V ++I+L         + A
Sbjct: 225 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 284

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+  M       N  TF +LI    +K  V+ AL++ +++ K G + ++  Y+ ++  
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
            CK K+++ A+     M   G  PD    + L+T+    GE+ + V+ + + +D     +
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404

Query: 275 LC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           L   N+++  L   G   +A  LL  M+                KG + P+  ++  I  
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVS---------------KG-LQPDIITYSTIAA 448

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L ++ +++ A+  F ++  +G   N  LYN +I GLC       + +L   M  +G  P
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T   +   L                    +E  +K    L+ ELC  G   E     
Sbjct: 509 NESTYTILIEGL-------------------AYEGLIKEARDLLDELCSRG---EEILLD 546

Query: 453 TDMVQEGFLPDIVCYSAAIGG 473
             ++   FL   +  S A GG
Sbjct: 547 VHLIDVAFLTTFLPCSNANGG 567



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 11/260 (4%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L   GLVE A  + +Q+ + G C PN+ SYN LL A CK   +D     L  M  
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYG-CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   D  +   LL   C SG+ D A+ + +++ D G     + ++ ++   +K G+  +
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL+  M    ++ +  T+  +  G  ++ R++ A++ F K+   G   +  +Y+ II 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLCK ++   A+ L++ M G+G  P+    + LI   + EG    L+KE    RD+  + 
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG----LIKEA---RDL--LD 534

Query: 274 LLCNSIMRILVSNGSIDQAY 293
            LC+    IL+    ID A+
Sbjct: 535 ELCSRGEEILLDVHLIDVAF 554


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 224/504 (44%), Gaps = 57/504 (11%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD---EGELTLLV 260
           DA  Y  +I     +++     Q+   MK  G      I   +  +C      GE     
Sbjct: 65  DATFYR-LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 123

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             +  D          NS++ +++  G    A+     +                 KG  
Sbjct: 124 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS------------KG-F 170

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  ++++II  L K G++D A+  FREM    C  +VF Y+ L++GLC   R++E+  
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKEL 439
           LL EM+  G  P   T N +   L +  D+  A  LV  M ++G  P  V +NT LI  L
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT-LIHGL 289

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV------------------- 480
           C  GK  +A   L  MV    +P+ V Y   I GL+  +R                    
Sbjct: 290 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 349

Query: 481 ----------------DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                           + A+ L++++   GC P+VV Y   I GLC+ ++  EAED+  E
Sbjct: 350 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 409

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M++KG +P+  TY+ L+ G+ K G+  +A+L    M+ ++    +V+  + L++GLC +G
Sbjct: 410 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH-NVVCCSVLLNGLCESG 468

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM--KEKGMKPDMFV 642
           R  +A+ +W  M  +G  P+ + + ++I GLC        L  F  M  +E   +PD+  
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  L +A   + N   A ++L  M
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSM 552



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 241/515 (46%), Gaps = 28/515 (5%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L++ Y  S +F     V + +   G V  E +F ++  A  K     +A     RM
Sbjct: 67  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 126

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM---TKSGFASDAAMYDVIIGGLCK 217
            +D + +   K+F  +++  +++     A + +  +      GF  +   Y++II  LCK
Sbjct: 127 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 186

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKEIWEDRDV-NTMT 273
             Q++ A+  + EM      PD    S L+     E    E   L+ E+  +  + N +T
Sbjct: 187 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 246

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N ++  L  NG + +A  L+  M                 KG V PN  +++ +I+ 
Sbjct: 247 F--NVLIDALSKNGDLSRAAKLVDNMF---------------LKGCV-PNEVTYNTLIHG 288

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLD ALSL  +M    C+ N   Y  +I+GL    R E+   +L  MEE G K  
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +  +S+   L +      A+ L ++M  +G +P V      I  LC+  K  EA   L 
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+ +GFLP+   YS+ + G         A+ +++++ +     +VV  +++++GLC++ 
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVIT 572
           R+ EA  ++  M+ +GL P V  Y+ +I G C  G++D+ +     M  +E  S PDV+T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           Y  L + LC       AI L N M ++GC P+ +T
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 563



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 263/585 (44%), Gaps = 69/585 (11%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            + +  G   L  EA   F ++  +  C     S+N +L  + +               D
Sbjct: 105 LIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQE-------------GD 151

Query: 95  YGWGYDKYTLTPLLQVY-CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDK 153
           + + +  Y     L V+  NS  F   L  +N II               A  K G++D+
Sbjct: 152 FSYAFKFY-----LHVFGANSKGFQPNLLTYNLIIK--------------ALCKLGQIDR 192

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +    M   N   +  T+  L++G  K+ RVD+A+ L D+M   G   +   ++V+I 
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 252

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDV 269
            L KN  L  A +L   M   G  P+    + LI     +G+L    +LL K +      
Sbjct: 253 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV------ 306

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFD 328
            +   + N +    + NG + Q              A+ GV +LM  +      N   + 
Sbjct: 307 -SSKCVPNQVTYGTIINGLVKQRR------------AEDGVHILMSMEERGQKANEYIYS 353

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +I+ L K+GK + A+ L++EM + GC  NV +Y   IDGLC   + +E+ ++L+EM   
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN----TLLIKELCKHGK 444
           GF P  FT +S+ +   ++ D   A+ + ++M  Q     ++HN    ++L+  LC+ G+
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD----MRHNVVCCSVLLNGLCESGR 469

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCC-PDVVAY 502
             EA    T M+ EG  PD+V YS+ I GL D+  VD  L+LF ++ C      PDVV Y
Sbjct: 470 LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 529

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ-AMLCLSRML 561
           NI+ + LC+   +  A DL N M+ +G  P   T N+ +    +  N  Q   L L  ++
Sbjct: 530 NILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV 589

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            +       ++   +++ + +   P +    W+ + ++ C P RI
Sbjct: 590 VRLLKRERKLSALRIVEEMLLRFLPPEP-STWSRVIQRTCKPKRI 633



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 218/497 (43%), Gaps = 37/497 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN +++ALCK   +D      +EM       D +T + L+   C   + D+A+ +
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+   G +   V F++L+ A SK G++ +A +L++ M       NE T+  LIHG   
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++DKAL L +KM  S    +   Y  II GL K ++ E  + +   M+  G   +  I
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351

Query: 243 LSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI+    EG+    V+ +W+   ++      ++  + +  L  +   D+A ++LQ M
Sbjct: 352 YSSLISGLFKEGKSENAVR-LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                KG + PN  ++  ++    K G    A+ +++EM       NV
Sbjct: 411 LS---------------KGFL-PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 454

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              + L++GLC S RL E+  +   M   G KP     +SM + LC    V   L L  +
Sbjct: 455 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 514

Query: 420 MRVQ--GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           M+ Q     P V    +L   LC+      A   L  M+ EG  PD +  +  +  L + 
Sbjct: 515 MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 574

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
                   LF D               ++  L K +R   A  +  EM+ + L P  +T+
Sbjct: 575 INPPQDGRLFLD--------------ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTW 620

Query: 538 NLLINGWCKSGNIDQAM 554
           + +I   CK   I + +
Sbjct: 621 SRVIQRTCKPKRIRETI 637


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 237/530 (44%), Gaps = 50/530 (9%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+I++    K GE+ +A  L  RM +     +  TF  LI G+ K   +D+  QL ++M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG  +D   Y+ +I   CK  ++E A   ++ MK  G+  +    S  + +   EG  
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG-- 307

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             LV+E         M L                      Q  ++G              
Sbjct: 308 --LVRE--------AMKLFA--------------------QMRVRG-------------- 323

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              ++ N  ++  +I+   K G+LD A+ L  EM + G   NV  Y  L+DGLC   ++ 
Sbjct: 324 ---MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ ++LR ME++G +       ++       ++   AL L+ +M+ +G E  +     LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + LC   K  EA   LT M + G  P+ + Y+  +       +V  A+ + + I   G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+V+ Y  +I GLCKA  + EA   FN+M   GL P+V  Y  L++G CK+G +++A+  
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            + M+ K   S D + YT L+DG    G   DA  L  +M + G   +   +   I+G C
Sbjct: 561 FNEMVHK-GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +    A   F  M   G+ PD  V+  LIS +    N   A  +  EM
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 204/447 (45%), Gaps = 60/447 (13%)

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           ++  L++  +D G L   V+ +   R+  V   T  CN I+  L  + S           
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRS----------- 172

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                    G  +  +F+   +PN  +F+I+I+ L K+G+L  A SLF  M ++GC+ +V
Sbjct: 173 ---------GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDV 223

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +N+LIDG      L+E  +L+ EM  SG K    T N++  C C+   +  A      
Sbjct: 224 VTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+ +G    V   +  +   CK G   EA +    M   G   +   Y+  I G     R
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED------------------- 520
           +D A+ L  ++   G   +VV Y +++ GLCK ++VAEAED                   
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 521 ----------------LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
                           L +EM  KGL   ++ Y  LI G C    +D+A   L++M   E
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM--DE 461

Query: 565 SG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           SG  P+ I YTT++D    +G+  +AI +  ++ + G  PN IT+ ALI GLCK      
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+ HF  M++ G+ P++  + AL+   
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGL 548



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 254/568 (44%), Gaps = 29/568 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   GL+++A     +V RE    PN  + N +L  L +  S  LV    +++   
Sbjct: 128 LLSVLADRGLLDDAVRAVARV-RELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP-- 184

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               + +T   ++   C  G+  +A S+F+ + + G + + V F+ L+  + K GE+D+ 
Sbjct: 185 --APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E M     + +  T+  LI+ F K  R++ A   F  M + G  ++   +   +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVN 270
            CK   +  A++L+++M+  G+  +    + LI      G L     LL + + +   +N
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
            +T                     L+  + K   +A+    + M+ K  V  N   +  +
Sbjct: 363 VVTYTV------------------LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+    +   + AL L  EM   G   ++ LY  LI GLCN ++L+E+  LL +M+ESG 
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P +    +M     +   V  A+ +++K+   G +P V     LI  LCK G   EA  
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M   G  P++  Y+A + GL     ++ A++LF ++   G   D V Y  ++ G  
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   + +A  L  +MI  GL   +  Y   I+G+C    + +A    S M+     +PD 
Sbjct: 585 KQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI-GHGIAPDR 643

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
             Y  LI      G  ++AI L +EME 
Sbjct: 644 AVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 223/536 (41%), Gaps = 88/536 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  LF ++K  G C+P+  ++N L++   K   +D VE  ++EM+  G   D  T
Sbjct: 202 GELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVT 260

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  +C  G+ + A   F  +   G +   V FS  + AF K G V +A +L  +M 
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK----- 217
              + LNE T+  LI G  K  R+D A+ L D+M + G   +   Y V++ GLCK     
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 218 ------------------------------NKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                                         NK  E AL L SEMK  G+  D  +   LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                                      LCN           +D+A +LL  M       +
Sbjct: 441 QG-------------------------LCNV--------HKLDEAKSLLTKM------DE 461

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
            G+E          PN   +  +++   K GK+  A+++ +++   G   NV  Y  LID
Sbjct: 462 SGLE----------PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALID 511

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC +  ++E+     +M + G  P      ++   LC+   +  A+ L  +M  +G   
Sbjct: 512 GLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
                T L+    K G   +AF     M+  G   D+ CY+  I G  ++  +  A E+F
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 631

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            ++  HG  PD   YN +IS   K   + EA  L +EM  + ++PS    +   +G
Sbjct: 632 SEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCTDSDTATDG 685


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 238/530 (44%), Gaps = 50/530 (9%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+I++    K GE+ +A  L  RM +     +  TF  LI G+ K   +D+  QL ++M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            +SG  +D   Y+ +I   CK  ++E A   ++ MK  G+  +    S  + +   EG  
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG-- 307

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             LV+E                 M++              Q  ++G              
Sbjct: 308 --LVREA----------------MKLFA------------QMRVRG-------------- 323

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
              ++ N  ++  +I+   K G+LD A+ L  EM + G   NV  Y  L+DGLC   ++ 
Sbjct: 324 ---MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ ++LR ME++G +       ++       ++   AL L+ +M+ +G E  +     LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + LC   K  EA   LT M + G  P+ + Y+  +       +V  A+ + + I   G  
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+V+ Y  +I GLCKA  + EA   FN+M   GL P+V  Y  L++G CK+G +++A+  
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            + M+ K   S D + YT L+DG    G   DA  L  +M + G   +   +   I+G C
Sbjct: 561 FNEMVHK-GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +    A   F  M   G+ PD  V+  LIS +    N   A  +  EM
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 204/447 (45%), Gaps = 60/447 (13%)

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           ++  L++  +D G L   V+ +   R+  V   T  CN I+  L  + S           
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRS----------- 172

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                    G  +  +F+   +PN  +F+I+I+ L K+G+L  A SLF  M ++GC+ +V
Sbjct: 173 ---------GRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDV 223

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +N+LIDG      L+E  +L+ EM  SG K    T N++  C C+   +  A      
Sbjct: 224 VTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+ +G    V   +  +   CK G   EA +    M   G   +   Y+  I G     R
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED------------------- 520
           +D A+ L  ++   G   +VV Y +++ GLCK ++VAEAED                   
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 521 ----------------LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
                           L +EM  KGL   ++ Y  LI G C    +D+A   L++M   E
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM--DE 461

Query: 565 SG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
           SG  P+ I YTT++D    +G+  +AI +  ++ + G  PN IT+ ALI GLCK      
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           A+ HF  M++ G+ P++  + AL+   
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGL 548



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 254/568 (44%), Gaps = 29/568 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   GL+++A     +V RE    PN  + N +L  L +  S  LV    +++   
Sbjct: 128 LLSVLADRGLLDDAVRAVARV-RELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP-- 184

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
               + +T   ++   C  G+  +A S+F+ + + G + + V F+ L+  + K GE+D+ 
Sbjct: 185 --APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E M     + +  T+  LI+ F K  R++ A   F  M + G  ++   +   +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVN 270
            CK   +  A++L+++M+  G+  +    + LI      G L     LL + + +   +N
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
            +T                     L+  + K   +A+    + M+ K  V  N   +  +
Sbjct: 363 VVTYTV------------------LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+    +   + AL L  EM   G   ++ LY  LI GLCN ++L+E+  LL +M+ESG 
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
           +P +    +M     +   V  A+ +++K+   G +P V     LI  LCK G   EA  
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M   G  P++  Y+A + GL     ++ A++LF ++   G   D V Y  ++ G  
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K   + +A  L  +MI  GL   +  Y   I+G+C    + +A    S M+     +PD 
Sbjct: 585 KQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI-GHGIAPDR 643

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
             Y  LI      G  ++AI L +EME 
Sbjct: 644 AVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 225/530 (42%), Gaps = 96/530 (18%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  LF ++K  G C+P+  ++N L++   K   +D VE  ++EM+  G   D  T
Sbjct: 202 GELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVT 260

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L+  +C  G+ + A   F  +   G +   V FS  + AF K G V +A +L  +M 
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK----- 217
              + LNE T+  LI G  K  R+D A+ L D+M + G   +   Y V++ GLCK     
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 218 ------------------------------NKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                                         NK  E AL L SEMK  G+  D  +   LI
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 248 TSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
               +  +L    +LL K   ++  +    ++  ++M     +G + +A  +LQ ++   
Sbjct: 441 QGLCNVHKLDEAKSLLTK--MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL--- 495

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
              D G +          PN  ++  +I+ L K G +D A+S F +M  +G   NV  Y 
Sbjct: 496 ---DSGFQ----------PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYT 542

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            L+DGLC +  L E+ +L  EM   G      +L+ +                       
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKG-----MSLDKVVY--------------------- 576

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
                    T L+    K G   +AF     M+  G   D+ CY+  I G  ++  +  A
Sbjct: 577 ---------TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 627

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
            E+F ++  HG  PD   YN +IS   K   + EA  L +EM  + ++PS
Sbjct: 628 REVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPS 675



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 14/215 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V EA  +  ++   G   PN  +Y  L++ LCK+ S+D       +M+D G   +   
Sbjct: 482 GKVPEAIAMLQKILDSGF-QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
            T L+   C +G  ++A+ +FNE++  G  +D+ V++ LL  + K G +  A  L  +M 
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           D  ++L+   +   I GF   + + +A ++F +M   G A D A+Y+ +I    K   LE
Sbjct: 601 DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLE 660

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
            A+ L  EM+            +++ SC+D    T
Sbjct: 661 EAISLQDEME------------RVLPSCTDSDTAT 683


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 255/553 (46%), Gaps = 57/553 (10%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L+ L++  C +G+   A    +   D   V    ++ ++  + + G+V  A  L   +  
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGDAAGV--VAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
             +  N  T+  ++     +  +  AL + D+M   G A+   M  VI+   C+      
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 224 ALQLYSEMKGSGITPDFEILSKLITS-----CSDEG-ELTLLVKEIWEDRDVNTMTLLCN 277
           A++    +   G T D    + ++++     C DEG EL   +     + D+ +     N
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSY----N 217

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           ++++ L      D    L+  M++      V   +  + +   +P+   +  II+ + KD
Sbjct: 218 AVLKGLCMAKRWDDVEELMVEMVR------VHEALSQMPEHGCTPDLRMYATIIDGICKD 271

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G  ++A  +   M   G   NV  YN ++ GLC++ R EE+ +LL EM +        T 
Sbjct: 272 GHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF 331

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N                                   +L+   C++G        L  M++
Sbjct: 332 N-----------------------------------ILVDFFCQNGLVDRVIELLEQMLE 356

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G +PD++ Y+  I G      VD A+ L +++ A GC P+ ++Y I++ GLC+A+R  +
Sbjct: 357 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 416

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A++L + MI +G +P+  T+N LIN  CK G  +QA+  L +ML     SPD+I+Y+T+I
Sbjct: 417 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQML-VNGCSPDLISYSTVI 475

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           DGL  AG+ ++A+ L N M  KG  PN I + ++ + L +  R    +  F  +++  ++
Sbjct: 476 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 535

Query: 638 PDMFVFVALISAF 650
            D  ++ A+IS+ 
Sbjct: 536 SDAALYNAVISSL 548



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 226/517 (43%), Gaps = 33/517 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN Y+Y  ++ +LC    +      L EM   G          +L+  C  G F  A+  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              +   G  +D    ++++ A  + G VD+  EL+ ++       +  ++  ++ G   
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 183 KSRVDKALQL----------FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
             R D   +L            +M + G   D  MY  II G+CK+   E+A  + S M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 233 GSGITPDF----EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             G+ P+      +L  L ++   E    LL +   ED  ++ +T   N ++     NG 
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF--NILVDFFCQNGL 343

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +D+   LL+ M++   I DV                 ++  +IN   K+G +D A+ L +
Sbjct: 344 VDRVIELLEQMLEHGCIPDV----------------ITYTTVINGFCKEGLVDEAVMLLK 387

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            M+  GC  N   Y  ++ GLC + R  ++ EL+  M + G  P   T N++   +C++ 
Sbjct: 388 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 447

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
               A+ L+++M V G  P +   + +I  L K GK  EA   L  M+ +G  P+ + YS
Sbjct: 448 LAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 507

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           +    L    R D  +++F  I       D   YN +IS LCK      A D F  M++ 
Sbjct: 508 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 567

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           G +P+ +TY +LI G    G + +A   LS +  + +
Sbjct: 568 GCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRA 604



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 175/357 (49%), Gaps = 11/357 (3%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V PN  ++  I+ +L   G +  AL++  EM   GC     + + +++  C       + 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             L+ +   G        N +   +C +  V   + L+RK+   G EP +     ++K L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 440 CKHGK-------AMEAFRF---LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
           C   +        +E  R    L+ M + G  PD+  Y+  I G+      ++A ++   
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + ++G  P+VV YN ++ GLC A+R  EAEDL  EM  +       T+N+L++ +C++G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +D+ +  L +MLE     PDVITYTT+I+G C  G  D+A+ML   M   GC PN I++ 
Sbjct: 344 VDRVIELLEQMLE-HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYT 402

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            ++ GLC+ +R   A      M ++G  P+   F  LI+    +     A E+LK+M
Sbjct: 403 IVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 208/494 (42%), Gaps = 50/494 (10%)

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI       R   A +  D    +G A+    Y+ +I G C+  Q+  A +L + +   
Sbjct: 49  ALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP-- 103

Query: 235 GITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
            + P+      ++ S    G +   L V +    R       +C+ I+      G    A
Sbjct: 104 -VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
              LQ +       D G                + +++++ + + G +D  + L R++  
Sbjct: 163 VRALQVLHAKGCTLDSG----------------NCNLVVSAICEQGCVDEGVELLRKLPS 206

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC  ++  YN ++ GLC + R ++  EL+ EM        H  L+              
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR-----VHEALS-------------- 247

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
                 +M   G  P ++    +I  +CK G    A   L+ M   G  P++VCY+  + 
Sbjct: 248 ------QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL   +R + A +L  ++    C  D V +NI++   C+   V    +L  +M+  G IP
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
            V TY  +ING+CK G +D+A++ L  M       P+ I+YT ++ GLC A R  DA  L
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNM-SACGCKPNTISYTIVLKGLCRAERWVDAQEL 420

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            + M ++GC PN +TF  LI  +CK      A+   + M   G  PD+  +  +I     
Sbjct: 421 ISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 480

Query: 653 ELNPPLAFEVLKEM 666
                 A E+L  M
Sbjct: 481 AGKTEEALELLNVM 494



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 196/483 (40%), Gaps = 69/483 (14%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-- 83
           C +  G    ++  +   G V+E   L  ++   G C P+  SYN +L+ LC +   D  
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG-CEPDIVSYNAVLKGLCMAKRWDDV 232

Query: 84  ---LVEM-----RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE 135
              +VEM      L +M ++G   D      ++   C  G  + A  + + +  +G    
Sbjct: 233 EELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN 292

Query: 136 HV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            V ++ +L         ++A +L+  M   +  L++ TF +L+  F +   VD+ ++L +
Sbjct: 293 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE 352

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M + G   D   Y  +I G CK   ++ A+ L   M   G  P+    + ++       
Sbjct: 353 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKG----- 407

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              L   E W D                         A  L+  MI+             
Sbjct: 408 ---LCRAERWVD-------------------------AQELISHMIQ------------- 426

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             +G + PN  +F+ +IN + K G  + A+ L ++M   GC  ++  Y+ +IDGL  + +
Sbjct: 427 --QGCL-PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 483

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            EE+ ELL  M   G  P     +SM   L R     G  + + +M     +  V+ +  
Sbjct: 484 TEEALELLNVMINKGITPNTIIYSSMASALSRE----GRTDKIIQMFDSIQDATVRSDAA 539

Query: 435 L----IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           L    I  LCK  +   A  F   MV  G +P+   Y+  I GL     V  A +L  ++
Sbjct: 540 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599

Query: 491 CAH 493
           C+ 
Sbjct: 600 CSR 602


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 236/498 (47%), Gaps = 29/498 (5%)

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M   NI  +  ++  +I+G  K+ R++KA+ L  +M  S    ++  Y +++ GLCK  +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLIT-----SCSDEGELTLLVKEIWEDRDVNTMTLL 275
           +E A++L  EMK  G+  D  + S LI+      C D G+   L  E+ E + ++   ++
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK--ALFDEMLE-KGISPNVVV 117

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + ++      G   +A  +L  M +               +G + P+  ++  +I  L 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTE---------------RG-IQPDVYTYTCMIGGLC 161

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           KDG+   AL LF  MT+ G   +   YN LI+GLC    + +++++   M E G +    
Sbjct: 162 KDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGH--EPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           + N++   LC    +  A+ L   +   G+  EP V     +I+ LCK G+  +A     
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M++ G   ++      IG  I    +D A+EL++ +   G  P    Y+++I G CK  
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVIT 572
            +  A+ LF+ M   GL P++  YN L+   CK  +++QA      M  KES   PD I+
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM--KESNCEPDTIS 399

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           +  +IDG   AG    A  L N+M++ G  P+  T+ + I  L K  +   A   F  M 
Sbjct: 400 FNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMI 459

Query: 633 EKGMKPDMFVFVALISAF 650
             G+ PD  V+ +LI  F
Sbjct: 460 ASGITPDNHVYDSLIKGF 477



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 248/523 (47%), Gaps = 37/523 (7%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++    K   ++KA +L+  M+  +   N  T+C+L+ G  K+ RV++A++L  +M 
Sbjct: 13  YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
           + G   D  +Y  +I G C    L+    L+ EM   GI+P+  + S LI     +G   
Sbjct: 73  RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132

Query: 255 ELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGV 310
           E T ++  + E     DV T T +       L  +G   +A +L   M  KGE       
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGG----LCKDGRARKALDLFDLMTEKGE------- 181

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                      P+T +++++IN L K+G +  A  +F  M + G    V  YN LI GLC
Sbjct: 182 ----------EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC 231

Query: 371 NSNRLEESYELLREMEESG--FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           N+ +L+E+ +L   + E G   +P   T N++ + LC+   +  A+ +   M  +G    
Sbjct: 232 NNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291

Query: 429 VKHNTLLIKELCKHG---KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +    +LI E  K G   KAME ++ +  +   G +P    YS  I G   +  ++ A  
Sbjct: 292 LFTCHILIGEYIKSGIIDKAMELWKRVHKL---GLVPSSTTYSVMIDGFCKMHMLNFAKG 348

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF  +   G  P +  YN +++ LCK   + +A  LF EM      P   ++N++I+G  
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K+G+I  A   L+ M ++   +PD  TY++ I+ L   G+ ++A   ++ M   G  P+ 
Sbjct: 409 KAGDIHSAKELLNDM-QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
             + +LI G    D     +   R M + G+  D+ +  ++++
Sbjct: 468 HVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILT 510



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 213/473 (45%), Gaps = 52/473 (10%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M +     D   Y+ II GLCK K+LE A+ L  EM+GS   P+        T C     
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNS------FTYCI---- 50

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                                  +M  L   G +++A  LL  M +     DV V     
Sbjct: 51  -----------------------LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVV----- 82

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                      +  +I+     G LD   +LF EM + G   NV +Y+ LI+G C     
Sbjct: 83  -----------YSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLW 131

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            E+  +L  M E G +P  +T   M   LC+      AL+L   M  +G EP      +L
Sbjct: 132 REATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVL 191

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG- 494
           I  LCK G   +AF+    M+++G   ++V Y+  I GL +  ++D A++LF  +   G 
Sbjct: 192 INGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGN 251

Query: 495 -CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              PDV+ +N +I GLCK  R+ +A ++++ MI +G   ++ T ++LI  + KSG ID+A
Sbjct: 252 YVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKA 311

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           M    R + K    P   TY+ +IDG C     + A  L++ M+  G +P    +  L+ 
Sbjct: 312 MELWKR-VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMA 370

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LCK      A   F+ MKE   +PD   F  +I   L   +   A E+L +M
Sbjct: 371 SLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 228/501 (45%), Gaps = 50/501 (9%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C PN+++Y  L++ LCK   V+     L EM+  G   D    + L+  +C+ G  D+  
Sbjct: 41  CEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           ++F+E+++ G   +  V+S L+  F K G   +A  ++  M +  I+ +  T+  +I G 
Sbjct: 101 ALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGL 160

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  R  KAL LFD MT+ G       Y+V+I GLCK   +  A +++  M   G     
Sbjct: 161 CKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG--KRL 218

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQAM 299
           E++S                         NT+ + LCN        NG +D+A  L  ++
Sbjct: 219 EVVS------------------------YNTLIMGLCN--------NGKLDEAMKLFSSL 246

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           ++                  V P+  +F+ +I  L K+G+LD A+ ++  M + G   N+
Sbjct: 247 LED--------------GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
           F  + LI     S  ++++ EL + + + G  P+  T + M    C+   +  A  L  +
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M++ G  P +     L+  LCK     +A R   +M +    PD + ++  I G +    
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A EL  D+   G  PD   Y+  I+ L K  ++ EA+  F+ MI  G+ P    Y+ 
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472

Query: 540 LINGWCKSGNIDQAMLCLSRM 560
           LI G+  +  I++ +  L +M
Sbjct: 473 LIKGFGLNDEIEEVINLLRQM 493



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 243/569 (42%), Gaps = 53/569 (9%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L + +R+     L  ++  S C  +      L+  L   G VEEA  L  ++KR+GL V 
Sbjct: 20  LCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEV- 78

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +   Y+ L+   C    +D  +    EM + G   +    + L+  +C  G + +A +V 
Sbjct: 79  DVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVL 138

Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           + + + G   D + ++ ++    K G   KA +L + M +     +  T+ VLI+G  K+
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM--KGSGITPDFE 241
             +  A ++F+ M + G   +   Y+ +I GLC N +L+ A++L+S +   G+ + PD  
Sbjct: 199 GCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPD-- 256

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                           +  N++++ L   G +D+A  +   MI+
Sbjct: 257 -------------------------------VITFNTVIQGLCKEGRLDKAVEIYDTMIE 285

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          +G+   N  +  I+I   +K G +D A+ L++ + ++G + +   
Sbjct: 286 ---------------RGSFG-NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +IDG C  + L  +  L   M+ SG  PT F  N++   LC+   +  A  L ++M+
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
               EP      ++I    K G    A   L DM Q G  PD   YS+ I  L  + +++
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A   F  + A G  PD   Y+ +I G      + E  +L  +M   G+I  +   N ++
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
              C S      M  L     + SG   +
Sbjct: 510 TFLCNSAEHLHVMELLPNFSSESSGGTSI 538


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 224/504 (44%), Gaps = 57/504 (11%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD---EGELTLLV 260
           DA  Y  +I     +++     Q+   MK  G      I   +  +C      GE     
Sbjct: 89  DATFYR-LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFF 147

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
             +  D          NS++ +++  G    A+     +                 KG  
Sbjct: 148 HRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS------------KG-F 194

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            PN  ++++II  L K G++D A+  FREM    C  +VF Y+ L++GLC   R++E+  
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKEL 439
           LL EM+  G  P   T N +   L +  D+  A  LV  M ++G  P  V +NT LI  L
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT-LIHGL 313

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV------------------- 480
           C  GK  +A   L  MV    +P+ V Y   I GL+  +R                    
Sbjct: 314 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 373

Query: 481 ----------------DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                           + A+ L++++   GC P+VV Y   I GLC+ ++  EAED+  E
Sbjct: 374 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 433

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M++KG +P+  TY+ L+ G+ K G+  +A+L    M+ ++    +V+  + L++GLC +G
Sbjct: 434 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH-NVVCCSVLLNGLCESG 492

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM--KEKGMKPDMFV 642
           R  +A+ +W  M  +G  P+ + + ++I GLC        L  F  M  +E   +PD+  
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  L +A   + N   A ++L  M
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSM 576



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 241/515 (46%), Gaps = 28/515 (5%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L++ Y  S +F     V + +   G V  E +F ++  A  K     +A     RM
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 150

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM---TKSGFASDAAMYDVIIGGLCK 217
            +D + +   K+F  +++  +++     A + +  +      GF  +   Y++II  LCK
Sbjct: 151 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 210

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKEIWEDRDV-NTMT 273
             Q++ A+  + EM      PD    S L+     E    E   L+ E+  +  + N +T
Sbjct: 211 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVT 270

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N ++  L  NG + +A  L+  M                 KG V PN  +++ +I+ 
Sbjct: 271 F--NVLIDALSKNGDLSRAAKLVDNMF---------------LKGCV-PNEVTYNTLIHG 312

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   GKLD ALSL  +M    C+ N   Y  +I+GL    R E+   +L  MEE G K  
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            +  +S+   L +      A+ L ++M  +G +P V      I  LC+  K  EA   L 
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+ +GFLP+   YS+ + G         A+ +++++ +     +VV  +++++GLC++ 
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVIT 572
           R+ EA  ++  M+ +GL P V  Y+ +I G C  G++D+ +     M  +E  S PDV+T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
           Y  L + LC       AI L N M ++GC P+ +T
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 587



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/584 (26%), Positives = 263/584 (45%), Gaps = 69/584 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           + +  G   L  EA   F ++  +  C     S+N +L  + +               D+
Sbjct: 130 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQE-------------GDF 176

Query: 96  GWGYDKYTLTPLLQVY-CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
            + +  Y     L V+  NS  F   L  +N II               A  K G++D+A
Sbjct: 177 SYAFKFY-----LHVFGANSKGFQPNLLTYNLIIK--------------ALCKLGQIDRA 217

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +    M   N   +  T+  L++G  K+ RVD+A+ L D+M   G   +   ++V+I  
Sbjct: 218 VDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDA 277

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVN 270
           L KN  L  A +L   M   G  P+    + LI     +G+L    +LL K +       
Sbjct: 278 LSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV------- 330

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDI 329
           +   + N +    + NG + Q              A+ GV +LM  +      N   +  
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRR------------AEDGVHILMSMEERGQKANEYIYSS 378

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+ L K+GK + A+ L++EM + GC  NV +Y   IDGLC   + +E+ ++L+EM   G
Sbjct: 379 LISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN----TLLIKELCKHGKA 445
           F P  FT +S+ +   ++ D   A+ + ++M  Q     ++HN    ++L+  LC+ G+ 
Sbjct: 439 FLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQD----MRHNVVCCSVLLNGLCESGRL 494

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI-CAHGCC-PDVVAYN 503
            EA    T M+ EG  PD+V YS+ I GL D+  VD  L+LF ++ C      PDVV YN
Sbjct: 495 REALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYN 554

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ-AMLCLSRMLE 562
           I+ + LC+   +  A DL N M+ +G  P   T N+ +    +  N  Q   L L  ++ 
Sbjct: 555 ILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVV 614

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           +       ++   +++ + +   P +    W+ + ++ C P RI
Sbjct: 615 RLLKRERKLSALRIVEEMLLRFLPPEP-STWSRVIQRTCKPKRI 657



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 218/497 (43%), Gaps = 37/497 (7%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN +++ALCK   +D      +EM       D +T + L+   C   + D+A+ +
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+   G +   V F++L+ A SK G++ +A +L++ M       NE T+  LIHG   
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K ++DKAL L +KM  S    +   Y  II GL K ++ E  + +   M+  G   +  I
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375

Query: 243 LSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            S LI+    EG+    V+ +W+   ++      ++  + +  L  +   D+A ++LQ M
Sbjct: 376 YSSLISGLFKEGKSENAVR-LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                KG + PN  ++  ++    K G    A+ +++EM       NV
Sbjct: 435 LS---------------KGFL-PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 478

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              + L++GLC S RL E+  +   M   G KP     +SM + LC    V   L L  +
Sbjct: 479 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 538

Query: 420 MRVQ--GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           M+ Q     P V    +L   LC+      A   L  M+ EG  PD +  +  +  L + 
Sbjct: 539 MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 598

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
                   LF D               ++  L K +R   A  +  EM+ + L P  +T+
Sbjct: 599 INPPQDGRLFLD--------------ELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTW 644

Query: 538 NLLINGWCKSGNIDQAM 554
           + +I   CK   I + +
Sbjct: 645 SRVIQRTCKPKRIRETI 661


>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 821

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 163/691 (23%), Positives = 299/691 (43%), Gaps = 85/691 (12%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +G  E A   F+     G+ VPN  +Y  ++ ALC+   VD V   ++ ++D G+ +D  
Sbjct: 35  IGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 94

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
             +  +  Y   G    AL    ++++ G   + V +SIL+   S+ G ++KA  L+ +M
Sbjct: 95  FYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKALGLLGKM 154

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               I  N  T+  +I G  KK +++ A  LFD++   G   D  +Y  +I G+CK   L
Sbjct: 155 IKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNL 214

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT------------------------ 257
             A  +  +M+  GI P     + +I      G ++                        
Sbjct: 215 NRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDISKGVVGDVITYSTLLDSYV 274

Query: 258 --------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
                   L ++  + +  +    ++CN +++  +  G+  +A  L +AM       ++G
Sbjct: 275 KVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAM------PEMG 328

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           +          +P+T+++  +I    K G+++ AL +F E+ +   +     YN++ID L
Sbjct: 329 L----------TPDTATYATMIEGYCKTGQIEDALEMFNELRK-SSVSAAVCYNHIIDAL 377

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK---------- 419
           C    LE + E+L E+ E G      T  ++   +       G L+LV K          
Sbjct: 378 CKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICL 437

Query: 420 -----------------------MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
                                  M +   +  V   + ++K L  + ++++A+  + +  
Sbjct: 438 GMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 497

Query: 457 QEGFLP-DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +      D++ Y+  I GL     +  AL+L     + G   + + YN +I+GLC+   +
Sbjct: 498 ETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCL 557

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  LF+ +   GL+PS  TY +LI+  CK G    A   L  M+ K    P+++ Y +
Sbjct: 558 VEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNILIYNS 616

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           ++DG C  G+ +DA+ + +        P+  T  ++I G CK      AL  F   KE+ 
Sbjct: 617 IVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEEN 676

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  D   F+ LI  F ++     A  +L+EM
Sbjct: 677 ISADFLGFLFLIKCFCTKGRMEEARGLLREM 707



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 197/420 (46%), Gaps = 28/420 (6%)

Query: 186 VDKALQLFDKMT--KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDFEI 242
           +D A+++ + MT  K  +  D  +   +I G CK  + E+AL  +     SG+  P+   
Sbjct: 1   MDNAIEVLEMMTNKKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVT 60

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY--NLLQAMI 300
            + ++++    G+       + E RD+         + R+       D  +  N +    
Sbjct: 61  YTAVVSALCQLGK-------VDEVRDL---------VRRLEDEGFEFDCVFYSNWIHGYF 104

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           KG  + D  ++   + +  ++ +  S+ I+I+ L ++G ++ AL L  +M + G   N+ 
Sbjct: 105 KGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLI 164

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y  +I GLC   +LE+++ L   +   G +   F   ++   +C++ ++  A +++  M
Sbjct: 165 TYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDM 224

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +G +P +     +I  LCK G+  EA     D + +G + D++ YS  +   + ++ +
Sbjct: 225 EQRGIQPSILTYNTVINGLCKAGRVSEA-----DDISKGVVGDVITYSTLLDSYVKVENI 279

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D  LE+ R         D+V  NI++          EA+ L+  M   GL P  ATY  +
Sbjct: 280 DAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATM 339

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I G+CK+G I+ A+   + +  ++S     + Y  +ID LC  G  + A+ +  E+ EKG
Sbjct: 340 IEGYCKTGQIEDALEMFNEL--RKSSVSAAVCYNHIIDALCKKGMLETAMEVLIELWEKG 397



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 138/611 (22%), Positives = 248/611 (40%), Gaps = 104/611 (17%)

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--F 138
           +++++EM   +  +Y   +D +  + ++  +C  G+ + AL  F   +D G +  ++  +
Sbjct: 4   AIEVLEMMTNKKVNYP--FDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTY 61

Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
           + ++ A  + G+VD+  +L+ R++D     +   +   IHG+ K   +  AL    KM +
Sbjct: 62  TAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVE 121

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
            G   D   Y ++I GL +   +E AL L  +M   GI P+      LIT          
Sbjct: 122 KGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPN------LITY--------- 166

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
                              +I+R L   G ++ A+ L       + I   G+E+      
Sbjct: 167 ------------------TAIIRGLCKKGKLEDAFVLF------DRILSFGIEV------ 196

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
               +   +  +I+ + K G L+ A S+  +M Q G   ++  YN +I+GLC + R+ E+
Sbjct: 197 ----DEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEA 252

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTLLIK 437
            ++ +     G      T +++     + +++   L + R+  V+   P  +    +L+K
Sbjct: 253 DDISK-----GVVGDVITYSTLLDSYVKVENIDAVLEIRRRF-VEAKIPMDLVMCNILLK 306

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
                G   EA      M + G  PD   Y+  I G     +++ ALE+F ++       
Sbjct: 307 AFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNEL-RKSSVS 365

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI-----NG--------- 543
             V YN II  LCK   +  A ++  E+  KGL   + T   L+     NG         
Sbjct: 366 AAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLV 425

Query: 544 ---------------------WCKSGNIDQAMLCLSRMLEKE--SGSPDVITYTTLIDGL 580
                                 C  G+ + A+     M+ K+     P  I   TL+D L
Sbjct: 426 YKVEQLNSDICLGMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPSTI-LKTLVDNL 484

Query: 581 CIAGRPDDAIML-WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
               R  DA +L  N  E    + + I +  +I GLCK      AL      K KG+  +
Sbjct: 485 ----RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLN 540

Query: 640 MFVFVALISAF 650
              + +LI+  
Sbjct: 541 TITYNSLINGL 551



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 130/309 (42%), Gaps = 26/309 (8%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELI 158
           D    T ++   C  G   KAL + N     G  ++   ++ L+    + G + +A  L 
Sbjct: 505 DVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLF 564

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           + +D+  +  +E T+ +LI    K+     A +L D M   G   +  +Y+ I+ G CK 
Sbjct: 565 DSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKL 624

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLC 276
            Q E A+++ S      + PD   +S +I     +G++   L V   +++ +++   L  
Sbjct: 625 GQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGF 684

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADV---------------GVEMLMIFKGTVS 321
             +++   + G +++A  LL+ M+  E +  +               G  + +  +G V 
Sbjct: 685 LFLIKCFCTKGRMEEARGLLREMLVSESVVKLINRVDAELVESESIRGFLVELCEQGRVP 744

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLF--------REMTQIGCMQNVFLYNNLIDGLCNSN 373
                 D I +T+   GK   +            +E+ +   + +    ++ I  LC S 
Sbjct: 745 QAIKILDEISSTIYLSGKNPGSYQRLQFLNGVNEKEIKKEDYVHDFHSLHSTISSLCTSG 804

Query: 374 RLEESYELL 382
           +LE++ E +
Sbjct: 805 KLEQANEFV 813


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 287/677 (42%), Gaps = 89/677 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCV---PNNYSYNCLLEALCKSCSVDL-------- 84
           LI    + GLV +   ++ ++    LC    PN Y++N L+ A CK  ++ L        
Sbjct: 16  LIYHFNAFGLVSQVCDIYTEM----LCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNV 71

Query: 85  -VEMRLKEMQDYGWG-----------------------YDKYTLTPLLQVYCNSGQFDKA 120
            VE+         WG                       +D  T   L++ +C  G     
Sbjct: 72  DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYG 131

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             + + ++  G   + + F+ L+  + K GE+  A +L+ERM    +  +  ++  LI+G
Sbjct: 132 ERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLING 191

Query: 180 FVKKSRVDKALQLFDKMTKS---------------------GFASDAAMYDVIIGGLCKN 218
           F K+   DKA  L  ++++S                        +D   Y  II   CK 
Sbjct: 192 FCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQ 251

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNTM 272
             LE A  LY EM  +G  PD    S ++     +G      EL   +K++  D +    
Sbjct: 252 HGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAY 311

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T L +S+ +     GS  +A+     ++    +  + ++++M               +++
Sbjct: 312 TTLIDSLFKA----GSAWEAFACQSQLV----VRGMTLDLVMC------------TTLVD 351

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L K  K   A  +FR ++++  + N   Y  LIDG C    +E    LL+EMEE    P
Sbjct: 352 GLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINP 411

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T +S+     ++  +  A+N+++KM  Q   P      +LI   CK GK   A    
Sbjct: 412 NVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLY 471

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G   + V +   +  L   KR+D A EL +D+ + G   D V Y  ++ G  KA
Sbjct: 472 NEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKA 531

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
            + + A ++  EM  K +   V TYN+LING  + G   +A    S M+E    +P+  T
Sbjct: 532 GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEM-GLAPNQAT 589

Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
           Y  +I   C  G  D+A+ LWNEM+     P+ IT   L+ GL +      A+     M 
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649

Query: 633 EKGMKPDMFVFVALISA 649
             G+ P++ +   L++A
Sbjct: 650 VMGIHPNLVIHRVLLNA 666



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 284/616 (46%), Gaps = 40/616 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G + EA  L  ++K+ G+  PN+ +Y  L+++L K+ S         ++   G   D   
Sbjct: 287 GRLSEAQELLREMKKMGVD-PNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVM 345

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L+     S +  +A  +F  +     +   + ++ L+  + K G++++   L++ M+
Sbjct: 346 CTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEME 405

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           + +I  N  T+  +I+G+ KK  +D+A+ +  KM       +A +Y ++I G CK  + E
Sbjct: 406 EKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQE 465

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCS-----DEGELTLLVKEIWEDRDVNTMTLLCN 277
           +A  LY+EMK SG+  +  +   L+ +       DE E  L        +DV +  LL +
Sbjct: 466 IATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL--------KDVTSRGLLLD 517

Query: 278 -----SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
                S+M      G    A N+++ M +     DV                 +++++IN
Sbjct: 518 HVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDV----------------VTYNVLIN 561

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            LL+ GK + A S++  M ++G   N   YN +I   C    L+ + EL  EM+     P
Sbjct: 562 GLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMP 620

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
           +  T N++   L    ++  A+N++ +M V G  P +  + +L+    K GKA    +  
Sbjct: 621 SSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMH 680

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             +V  G   +   Y+  I     ++    A  + + +   G   D V YN +I G C++
Sbjct: 681 EQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCES 740

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVI 571
             V +A   + +M+ +G+ P++ TYNLL+ G   +G + +      +M  KE+G +PD  
Sbjct: 741 SHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM--KENGLNPDAS 798

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY TLI G    G   ++I L+ EM  +G  P   T+  LI+   K  +   A      M
Sbjct: 799 TYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEM 858

Query: 632 KEKGMKPDMFVFVALI 647
           + +G+ P    +  LI
Sbjct: 859 QVRGVPPSSSTYDILI 874



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/568 (25%), Positives = 240/568 (42%), Gaps = 72/568 (12%)

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
           YT   L+  +C  G    AL +   +     VD   ++ ++  F + G V++A   +  M
Sbjct: 46  YTHNVLVHAWCKMGNLILALDLLRNV--DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIM 103

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
              +   +  T  +L+ GF +        ++ D +   G   D   ++ +I G CK  ++
Sbjct: 104 VKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEM 163

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNS 278
            +AL L   M+  G+  D    + LI      GE      L+ EI E R V         
Sbjct: 164 SLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVK-------- 215

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
                      D  +  +   IK +   ++  +++            ++  II+T  K  
Sbjct: 216 -----------DSVFFNIDDRIKKDDNLNLEADLI------------TYTTIISTYCKQH 252

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L+ A +L+ EM   G + +V  Y+++++GLC   RL E+ ELLREM++ G  P H    
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAY- 311

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
                                             T LI  L K G A EAF   + +V  
Sbjct: 312 ----------------------------------TTLIDSLFKAGSAWEAFACQSQLVVR 337

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G   D+V  +  + GL    +   A ++FR +      P+ + Y  +I G CK   +   
Sbjct: 338 GMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERV 397

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           E L  EM  K + P+V TY+ +ING+ K G +D+A+  + +ML+ ++  P+   Y  LID
Sbjct: 398 ESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD-QNIIPNAYVYAILID 456

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C AG+ + A  L+NEM+  G   N + F  L+  L +  R   A    + +  +G+  
Sbjct: 457 GYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLL 516

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D   + +L+  F        A  +++EM
Sbjct: 517 DHVNYTSLMDGFFKAGKESAALNMVEEM 544



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 275/627 (43%), Gaps = 87/627 (13%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           +EA  +F  + +  L +PN+ +Y  L++  CK   ++ VE  L+EM++     +  T + 
Sbjct: 360 KEAEDMFRALSKLNL-IPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSS 418

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  Y   G  D+A++V  +++D   + + +V++IL+  + K G+ + A +L   M    
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478

Query: 166 IRLNEKTFCVLIH-----------------------------------GFVKKSRVDKAL 190
           +++N   F VL++                                   GF K  +   AL
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
            + ++MT+     D   Y+V+I GL ++ + E A  +YS M   G+ P+    + +I + 
Sbjct: 539 NMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAY 597

Query: 251 SDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             +GEL   + E+W +   + +   ++ CN+++  L   G I++A N+L  M      + 
Sbjct: 598 CKQGELDNAL-ELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM------SV 650

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
           +G+           PN     +++N   K GK +  L +  ++  +G   N   YNNLI 
Sbjct: 651 MGIH----------PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIV 700

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
             C     +++  +L+ M   GF     T N++ R  C    V  AL    +M  +G  P
Sbjct: 701 VFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSP 760

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            +    LL+  L   G   E       M + G  PD   Y   I G   I     ++ L+
Sbjct: 761 NIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLY 820

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK- 546
            ++ A G  P    YN++IS   K  ++ +A +L NEM  +G+ PS +TY++LI GWC  
Sbjct: 821 CEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNL 880

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
           S + D     L R L+K         Y T            DA  L  EM +KG  P + 
Sbjct: 881 SKHPD-----LDRTLKK--------IYRT------------DAKNLITEMNDKGFVPCKS 915

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKE 633
           T   + +      RP   L   +++KE
Sbjct: 916 TIACISSTFA---RPGKMLDAEKLLKE 939



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 4/196 (2%)

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M +   +P ++ ++  I        V    +++ ++      P+V  +N+++   CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           +  A DL   +  +       TYN +I G+C+ G ++QA   LS M++K++   D IT  
Sbjct: 61  LILALDLLRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDT-CFDTITCN 116

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            L+ G C  G       + + +   G   + I F  LI G CK      AL     M+++
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 635 GMKPDMFVFVALISAF 650
           G+  D+  +  LI+ F
Sbjct: 177 GLLSDIVSYNTLINGF 192



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 4/174 (2%)

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           H   P ++ +N +I        V++  D++ EM+   + P+V T+N+L++ WCK GN+  
Sbjct: 4   HNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLIL 63

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A L L R ++ E    D +TY T+I G C  G  + A    + M +K    + IT   L+
Sbjct: 64  A-LDLLRNVDVEV---DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILV 119

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G C+    +        +   G   D+  F  LI  +       LA ++++ M
Sbjct: 120 KGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERM 173


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/607 (24%), Positives = 252/607 (41%), Gaps = 53/607 (8%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  S N LLE+L        V      +   G   D +    ++Q    +G  D AL+
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 123 VFNEI-IDHGWVDEHVFSILLVAFSKW--GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +   +    G      FS  +V    W  G+   A ++ + M D  +  N  T+  +I G
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            VK   ++   +L D+M   G   +   Y+V++ GLC+  +++    L  EM    + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
               S L    +  GE   +            ++L   S+ +     G +  AY      
Sbjct: 299 GFTYSILFDGLTRTGESQTM------------LSLFAESLKK-----GVMLGAY------ 335

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                                     +  I++N L KDGK+  A  +F  +   G +   
Sbjct: 336 --------------------------TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +YN LI+G C    L  ++ +  +M+    +P H T N++   LC+ + V  A +LV +
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G +P V+    LI      G+  + F  L+DM Q+G   D++ + + +       +
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A+ +  D+      P+   YN II    ++    +A  L  +M   G+  S+ TYNL
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L+ G C+S  ID+A   L   L  +   PDV++Y T+I   C  G  D A+ L  EM + 
Sbjct: 550 LLKGLCRSSQIDEAEE-LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  P   T   L++ L    R       ++ M  K ++P   ++  ++ A++   N    
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668

Query: 660 FEVLKEM 666
             + KEM
Sbjct: 669 ASLKKEM 675



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 230/538 (42%), Gaps = 55/538 (10%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A  +  +I  L   G   +A  +FD++   G+  PN  +YN +++   K   ++    
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV-APNRITYNTMIDGHVKGGDLE-AGF 249

Query: 88  RLK-EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAF 145
           RL+ +M   G   +  T   LL   C +G+ D+  ++ +E+  H  + D   +SIL    
Sbjct: 250 RLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGL 309

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           ++ GE      L        + L   T  +L++G  K  +V KA Q+F+ +  +G     
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            +Y+ +I G C+ + L  A  ++ +MK   I PD    + LI                  
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING---------------- 413

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                    LC                   L+ + K E   D+ +EM    K  V P+  
Sbjct: 414 ---------LCK------------------LEMVTKAE---DLVMEM---EKSGVDPSVE 440

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ +I+     G+L+   ++  +M Q G   +V  + +++   C + ++ E+  +L +M
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 P     NS+        D   AL LV KM+  G    +    LL+K LC+  + 
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   +  +  +G  PD+V Y+  I    +    D ALEL +++  +G  P +   + +
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTL 620

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +S L  A RV + E L+ +M+ K + PS + Y ++++ + +  N  +       M EK
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 162/627 (25%), Positives = 281/627 (44%), Gaps = 36/627 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           AL   +    + G+  EA  +  +V+R G   P+  + + LL  L +S  V       +E
Sbjct: 150 ALRLALHAFLAAGMAAEALDVLARVRRSG-NTPSLSALSALLRLLFRSGEVRAAWNVFEE 208

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G      T   +L  +C+ G    A  +   +   G   D   ++IL+     +G 
Sbjct: 209 MTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGW 268

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A ++ E M          T+ +L+     + R+ +A +LFD+M + G   +   ++V
Sbjct: 269 SRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNV 328

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I G  K+ Q++ A   Y EM+  G+ PD    + +       G    LV     D D+ 
Sbjct: 329 LIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLV----HDHDMF 384

Query: 271 TMTLLCNSIMRI---LVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSS 326
           +  +  + +  +   L  +  +D A+ LL   I +G P+   G                 
Sbjct: 385 SSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTG----------------- 427

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           F+ +I    K+G  + A  L+R M ++G   +   +N LI GLCN  RL+E+  LL  M 
Sbjct: 428 FNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMV 487

Query: 387 ESGF-KPTHFT--LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             G+   T FT  L++ FR      + VGAL     M   G +      +  I  LC+  
Sbjct: 488 SKGYCLSTSFTICLDAYFR----DGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLD 543

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
              EA++   +M   G +P+ + Y++ I  L     +  AL+L +++   G  PD+   N
Sbjct: 544 CVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSN 603

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I+I GLC+  ++   ++L  +M + GL P   TYN +IN +C++ +++ AM  +++ML  
Sbjct: 604 ILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVA 663

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               PD+ TY   +  LC     + A  L +E+    C+PN +T+  L+ G+C     RA
Sbjct: 664 GC-EPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRA 722

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++  R++K    KP+       +S F
Sbjct: 723 MILTGRLIK-MAFKPNTITLNVFLSHF 748



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/593 (25%), Positives = 257/593 (43%), Gaps = 61/593 (10%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V  A  +F+++  EG   P+  ++N +L   C    V +    L  M   G   D  +
Sbjct: 197 GEVRAAWNVFEEMTAEG-PRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCS 255

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
              L++ +C  G    A  +F  +   G     V ++IL+      G + +A  L + M 
Sbjct: 256 YNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMA 315

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG-------- 214
              I++N  TF VLI G+ K  ++D+A   + +M   G   D+  +++I           
Sbjct: 316 QVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAA 375

Query: 215 ------------------------LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
                                   LC + +L+ A +L       G+       + LI + 
Sbjct: 376 QLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAY 435

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNS-----IMRILVSNGSIDQAYNLLQAMIKGEPI 305
           S EG L     E++  R +N + L  +S     ++  L + G +D+A  LL+ M+     
Sbjct: 436 SKEG-LHEEASELY--RIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVS---- 488

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                      KG     ++SF I ++   +DG    AL  + +M  IG   +   ++  
Sbjct: 489 -----------KGYCL--STSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAY 535

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I+GLC  + + E+Y+   EM   G  P + T NS+   LC+  ++  AL LV+ MR  G 
Sbjct: 536 INGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGL 595

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P +  + +LI  LC+ GK       L DM   G  PD V Y+  I      + ++ A+ 
Sbjct: 596 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 655

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
               +   GC PD+  YNI +  LC+   + +A  L +E++     P+  TYN L++G C
Sbjct: 656 FMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC 715

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            S  +D+AM+   R++ K +  P+ IT    +   C  G  + A+M   ++ E
Sbjct: 716 -SDVLDRAMILTGRLI-KMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLRE 766



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 214/495 (43%), Gaps = 44/495 (8%)

Query: 173 FCVL---IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           +C L   +H F+      +AL +  ++ +SG     +    ++  L ++ ++  A  ++ 
Sbjct: 148 YCALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFE 207

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           EM   G  P     + ++      G                 M  + + ++ I+  +G  
Sbjct: 208 EMTAEGPRPSLATFNAMLLGFCHRG-----------------MVRVASGLLGIMGKSGIA 250

Query: 290 DQ--AYNLLQAMIKGEPIADVGVEMLMIFKGT----VSPNTSSFDIIINTLLKDGKLDLA 343
               +YN+L   IKG  +     +   +F+G       P   +++I+++ L  +G++  A
Sbjct: 251 PDVCSYNIL---IKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEA 307

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
             LF EM Q+G   N   +N LIDG   S +++++    REM+  G  P   T N +   
Sbjct: 308 RRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNII--- 364

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNT-----LLIKELCKHGKAMEAFRFLTDMVQE 458
             R      A  LV       H+ +  H +     +L+  LC   +  +A+  L   +++
Sbjct: 365 AARAHKFGYAAQLVHD-----HDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQ 419

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G    +  ++A I         + A EL+R +   G  P    +N +I GLC   R+ EA
Sbjct: 420 GVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEA 479

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L   M++KG   S  ++ + ++ + + GN   A+ C   M        D I ++  I+
Sbjct: 480 QLLLEHMVSKGYCLST-SFTICLDAYFRDGNAVGALKCWDDM-GNIGLQTDFIAFSAYIN 537

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC     ++A   + EM  +G  PN IT+ ++I+ LCK      AL   + M++ G+ P
Sbjct: 538 GLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVP 597

Query: 639 DMFVFVALISAFLSE 653
           D++    LI     E
Sbjct: 598 DIYTSNILIDGLCRE 612



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 232/555 (41%), Gaps = 84/555 (15%)

Query: 23  KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           +S C  +      L+  L   G + EA  LFD++ + G+ V N  ++N L++   KS  +
Sbjct: 281 RSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQV-NTITFNVLIDGYAKSGQM 339

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--- 139
           D      +EMQ  G   D  T      +   + +F  A  +   + DH     H+ +   
Sbjct: 340 DQASAAYREMQARGLVPDSCTFN---IIAARAHKFGYAAQL---VHDHDMFSSHMSADGL 393

Query: 140 ILLVAFSKWGE-VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
            +LV    W   +D A EL+    +  + L    F  LI  + K+   ++A +L+  M K
Sbjct: 394 DMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNK 453

Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD----EG 254
            G A  ++ ++ +I GLC   +L+ A  L   M   G       LS   T C D    +G
Sbjct: 454 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC-----LSTSFTICLDAYFRDG 508

Query: 255 ELTLLVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                +K  W+D        D    +   N + R+      +++AY     M        
Sbjct: 509 NAVGALK-CWDDMGNIGLQTDFIAFSAYINGLCRL----DCVNEAYQAFAEMTS------ 557

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                    +G V PN  +++ II+ L K G +  AL L + M Q G + +++  N LID
Sbjct: 558 ---------RGIV-PNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILID 607

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC   +L+    LL +M  +G  P   T N++    CR QD+  A+N + KM V G EP
Sbjct: 608 GLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEP 667

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            +    + +  LC++    +A + L ++V                               
Sbjct: 668 DIFTYNIWMHSLCRNHMLNQAGKLLDELV------------------------------- 696

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
               A  C P+ V YN ++ G+C +  +  A  L   +I     P+  T N+ ++ +CK 
Sbjct: 697 ----AVDCSPNSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQ 751

Query: 548 GNIDQAMLCLSRMLE 562
           G  ++A++   ++ E
Sbjct: 752 GFGNRALMWAEKLRE 766



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 36/201 (17%)

Query: 501 AYNIIISGLCKAQRVAEAED-----------------------------------LFNEM 525
           A  + +     A   AEA D                                   +F EM
Sbjct: 150 ALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEM 209

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +G  PS+AT+N ++ G+C  G +  A   L  ++ K   +PDV +Y  LI G C+ G 
Sbjct: 210 TAEGPRPSLATFNAMLLGFCHRGMVRVASGLLG-IMGKSGIAPDVCSYNILIKGHCVFGW 268

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             DA  ++  M   GC P  +T+  L+  LC   R   A   F  M + G++ +   F  
Sbjct: 269 SRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNV 328

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           LI  +        A    +EM
Sbjct: 329 LIDGYAKSGQMDQASAAYREM 349


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 240/518 (46%), Gaps = 30/518 (5%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           E + R+    +  +   + VL+ G+ +  + D  ++ FD+M  SG       Y+  IG +
Sbjct: 146 EFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVM 205

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTM 272
            KN   ++  + Y+     G        S+ IT+      + L V+E+  D D       
Sbjct: 206 IKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIEL-VEELLTDMDKFGCFPD 264

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV--------------------GVEM 312
              CN  +  L  +  +  A  +++ M       DV                    G+  
Sbjct: 265 FWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWE 324

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+ +G + P+  +   +I  L K+ K+D A  L   M  +    NV +YN LI G   +
Sbjct: 325 EMVRRG-LKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRA 383

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             +E++Y+ +  M+ +G +P   T N +    C       A NL+RKM + G  P     
Sbjct: 384 GSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSY 443

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +L+K LCK  +  +AF F++D ++ G   DIV  +  I      K+V+ AL LF+++  
Sbjct: 444 NILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGY 503

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D V Y I+I+GL        AE+LF++M+   ++P+V  YN++++  CK G+   
Sbjct: 504 KGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKH 563

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A     +M +KE  SPD +T+ TLI  L  + R  +A+ L+ EM  KG  P+ +TF  +I
Sbjct: 564 AQKIFWQMTQKEV-SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYII 622

Query: 613 TGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVALIS 648
           +GL   D  +A L +  +  M E G+  D  V   LIS
Sbjct: 623 SGL--LDEGKATLAYEIWEYMMENGIILDRDVSERLIS 658



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 241/559 (43%), Gaps = 30/559 (5%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           NN++   ++  L    +  L+   L  ++  G  + +     LL  Y  +G+FD  +  F
Sbjct: 124 NNFAIAYIISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETF 183

Query: 125 NEIIDHG----WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +E++  G     VD + F  +++    +  V+K   +      C   L   T+   I   
Sbjct: 184 DEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFC---LTPFTYSRWITAL 240

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + +R++   +L   M K G   D    ++ +  LC + +L  ALQ+  +M   G  PD 
Sbjct: 241 CQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDV 300

Query: 241 EILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              + +++   D    +  V  +WE+   R +    + C +++  L  N  +D+A+ L  
Sbjct: 301 VTYTTVVSCLCDHRRFSEAVG-LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELAS 359

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+  +                +  N S ++ +I+   + G ++ A      M + GC  
Sbjct: 360 RMLTLD----------------IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEP 403

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  YN L++  C+    +++  L+R+ME SG  P  ++ N + + LC+   +  A   V
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 418 R-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M V G    V  N +LI   C+  K   A     +M  +G   D V Y   I GL  
Sbjct: 464 SDHMEVGGFCDIVSCN-ILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFG 522

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I   +LA ELF  +      P+V  YNI++  LCK      A+ +F +M  K + P   T
Sbjct: 523 IGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVT 582

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           +N LI    KS    +A L L + +  +   PD +T+  +I GL   G+   A  +W  M
Sbjct: 583 FNTLIYWLGKSSRAVEA-LDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYM 641

Query: 597 EEKGCAPNRITFMALITGL 615
            E G   +R     LI+ L
Sbjct: 642 MENGIILDRDVSERLISVL 660



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 55/322 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G +E+A      ++R G C P+  +YN LL   C     D  E  +++M+  
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNG-CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMS 434

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D+Y+   LL+  C + Q DKA +         +V +H+            EV   C
Sbjct: 435 GVNPDRYSYNILLKGLCKAHQLDKAFA---------FVSDHM------------EVGGFC 473

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +++     CNI         LI  F +  +V+ AL LF +M   G  +DA  Y ++I GL
Sbjct: 474 DIVS----CNI---------LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGL 520

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
                  +A +L+ +M  + I P+  + + ++ +    G      K  W+   ++V+  T
Sbjct: 521 FGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDT 580

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +  N+++  L  +    +A +L + M  KG                 V P+  +F  II+
Sbjct: 581 VTFNTLIYWLGKSSRAVEALDLFKEMRTKG-----------------VEPDNLTFRYIIS 623

Query: 333 TLLKDGKLDLALSLFREMTQIG 354
            LL +GK  LA  ++  M + G
Sbjct: 624 GLLDEGKATLAYEIWEYMMENG 645


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 240/518 (46%), Gaps = 30/518 (5%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           E + R+    +  +   + VL+ G+ +  + D  ++ FD+M  SG       Y+  IG +
Sbjct: 146 EFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVM 205

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTM 272
            KN   ++  + Y+     G        S+ IT+      + L V+E+  D D       
Sbjct: 206 IKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIEL-VEELLTDMDKFGCFPD 264

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV--------------------GVEM 312
              CN  +  L  +  +  A  +++ M       DV                    G+  
Sbjct: 265 FWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWE 324

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+ +G + P+  +   +I  L K+ K+D A  L   M  +    NV +YN LI G   +
Sbjct: 325 EMVRRG-LKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRA 383

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
             +E++Y+ +  M+ +G +P   T N +    C       A NL+RKM + G  P     
Sbjct: 384 GSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSY 443

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +L+K LCK  +  +AF F++D ++ G   DIV  +  I      K+V+ AL LF+++  
Sbjct: 444 NILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGY 503

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D V Y I+I+GL        AE+LF++M+   ++P+V  YN++++  CK G+   
Sbjct: 504 KGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKH 563

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A     +M +KE  SPD +T+ TLI  L  + R  +A+ L+ EM  KG  P+ +TF  +I
Sbjct: 564 AQKIFWQMTQKEV-SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYII 622

Query: 613 TGLCKCDRPRAALVH--FRMMKEKGMKPDMFVFVALIS 648
           +GL   D  +A L +  +  M E G+  D  V   LIS
Sbjct: 623 SGL--LDEGKATLAYEIWEYMMENGIILDRDVSERLIS 658



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 241/559 (43%), Gaps = 30/559 (5%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           NN++   ++  L    +  L+   L  ++  G  + +     LL  Y  +G+FD  +  F
Sbjct: 124 NNFAIAYIISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETF 183

Query: 125 NEIIDHG----WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +E++  G     VD + F  +++    +  V+K   +      C   L   T+   I   
Sbjct: 184 DEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFC---LTPFTYSRWITAL 240

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            + +R++   +L   M K G   D    ++ +  LC + +L  ALQ+  +M   G  PD 
Sbjct: 241 CQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDV 300

Query: 241 EILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
              + +++   D    +  V  +WE+   R +    + C +++  L  N  +D+A+ L  
Sbjct: 301 VTYTTVVSCLCDHRRFSEAVG-LWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELAS 359

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+  +                +  N S ++ +I+   + G ++ A      M + GC  
Sbjct: 360 RMLTLD----------------IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEP 403

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  YN L++  C+    +++  L+R+ME SG  P  ++ N + + LC+   +  A   V
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 418 R-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
              M V G    V  N +LI   C+  K   A     +M  +G   D V Y   I GL  
Sbjct: 464 SDHMEVGGFCDIVSCN-ILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFG 522

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           I   +LA ELF  +      P+V  YNI++  LCK      A+ +F +M  K + P   T
Sbjct: 523 IGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVT 582

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           +N LI    KS    +A L L + +  +   PD +T+  +I GL   G+   A  +W  M
Sbjct: 583 FNTLIYWLGKSSRAVEA-LDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYM 641

Query: 597 EEKGCAPNRITFMALITGL 615
            E G   +R     LI+ L
Sbjct: 642 MENGIILDRDVSERLISVL 660



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 55/322 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI      G +E+A      ++R G C P+  +YN LL   C     D  E  +++M+  
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNG-CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMS 434

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D+Y+   LL+  C + Q DKA +         +V +H+            EV   C
Sbjct: 435 GVNPDRYSYNILLKGLCKAHQLDKAFA---------FVSDHM------------EVGGFC 473

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +++     CNI         LI  F +  +V+ AL LF +M   G  +DA  Y ++I GL
Sbjct: 474 DIVS----CNI---------LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGL 520

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
                  +A +L+ +M  + I P+  + + ++ +    G      K  W+   ++V+  T
Sbjct: 521 FGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDT 580

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +  N+++  L  +    +A +L + M  KG                 V P+  +F  II+
Sbjct: 581 VTFNTLIYWLGKSSRAVEALDLFKEMRTKG-----------------VEPDNLTFRYIIS 623

Query: 333 TLLKDGKLDLALSLFREMTQIG 354
            LL +GK  LA  ++  M + G
Sbjct: 624 GLLDEGKATLAYEIWEYMMENG 645


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 175/328 (53%), Gaps = 1/328 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   ++N   +  +   A+SL   M   G + NV +YN +I+GLC +  L  + E+
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              ME+ G +    T N++   L        A  L+R M  +  +P V   T LI    K
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G  +EA     +M++   +P++  Y++ I G      +  A  +F  + + GC PDVV 
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CK++RV +   LF EM  +GL+    TYN LI+G+C++G ++ A    +RM+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +    SPD++TY  L+D LC  G+ + A+++  ++++     + IT+  +I GLC+ D+ 
Sbjct: 387 DC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISA 649
           + A   FR +  KG+KPD   ++ +IS 
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISG 473



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 220/478 (46%), Gaps = 23/478 (4%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FE 241
           + D A  LF +M +S        +  ++  + K  + ++ + LY +M+  GI+ D   F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           IL      CS       L+ ++ +                 L    SI    +LL    +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMK-----------------LGFRPSIVTLGSLLNGFCQ 161

Query: 302 GEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           G    +  V ++    G    PN   ++ +IN L K+  L+ AL +F  M + G   +  
Sbjct: 162 GNRFQE-AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            YN LI GL NS R  ++  LLR+M +    P      ++     +  +++ A NL ++M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
             +   P V     LI   C HG   +A      MV +G  PD+V Y+  I G    KRV
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           +  ++LF ++   G   D   YN +I G C+A ++  A+ +FN M+  G+ P + TYN+L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++  C +G I++A++ +   L+K     D+ITY  +I GLC   +  +A  L+  +  KG
Sbjct: 401 LDCLCNNGKIEKALVMVED-LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
             P+ I ++ +I+GLC+    R A    R MKE G  P   ++   +    + L+  L
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAEL 517



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 206/438 (47%), Gaps = 19/438 (4%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            T +L V     +FD  + +++++ + G   D + F+IL+  F +   +  A  L+ +M 
Sbjct: 82  FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               R +  T   L++GF + +R  +A+ L D M   GF  +  +Y+ +I GLCKN+ L 
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
            AL+++  M+  GI  D    + LI+  S+ G  T   + + +   R ++   +   +++
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
              V  G++ +A NL + MI+                 +V PN  +++ +IN     G L
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRR----------------SVVPNVFTYNSLINGFCIHGCL 305

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  +F  M   GC  +V  YN LI G C S R+E+  +L  EM   G     FT N++
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +  A  +  +M   G  P +    +L+  LC +GK  +A   + D+ +   
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI+ Y+  I GL    ++  A  LFR +   G  PD +AY  +ISGLC+     EA+ 
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485

Query: 521 LFNEMITKGLIPSVATYN 538
           L   M   G +PS   Y+
Sbjct: 486 LCRRMKEDGFMPSERIYD 503



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 159/328 (48%), Gaps = 1/328 (0%)

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K D A SLF EM Q   + ++  +  ++  +   N+ +    L  +ME  G     ++  
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +  C CR   +  AL L+ KM   G  P +     L+   C+  +  EA   +  M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF+P++V Y+  I GL   + ++ ALE+F  +   G   D V YN +ISGL  + R  +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             L  +M+ + + P+V  +  LI+ + K GN+ +A      M+ + S  P+V TY +LI+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLIN 297

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G CI G   DA  +++ M  KGC P+ +T+  LITG CK  R    +  F  M  +G+  
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           D F +  LI  +       +A +V   M
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRM 385



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 193/424 (45%), Gaps = 26/424 (6%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   +  +L  + K    D+V     +M++ G  +D Y+ T L+  +C   +   AL+
Sbjct: 76  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  +++  G+    V    LL  F +     +A  L++ MD      N   +  +I+G  
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   ++ AL++F  M K G  +DA  Y+ +I GL  + +   A +L  +M    I P+  
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255

Query: 242 ILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
             + LI +   EG L L  + ++++   R V       NS++     +G +  A  +   
Sbjct: 256 FFTALIDTFVKEGNL-LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314

Query: 299 MIKGEPIADV------------------GVEML--MIFKGTVSPNTSSFDIIINTLLKDG 338
           M+      DV                  G+++   M ++G V  +  +++ +I+   + G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-DAFTYNTLIHGYCQAG 373

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           KL++A  +F  M   G   ++  YN L+D LCN+ ++E++  ++ ++++S       T N
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            + + LCR   +  A  L R +  +G +P       +I  LC+ G   EA +    M ++
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493

Query: 459 GFLP 462
           GF+P
Sbjct: 494 GFMP 497



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 9/211 (4%)

Query: 34  GFLIR-CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
           GF I  CLG      +A  +FD +  +G C P+  +YN L+   CKS  V+       EM
Sbjct: 298 GFCIHGCLG------DAKYMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEV 151
              G   D +T   L+  YC +G+ + A  VFN ++D G   + V ++ILL      G++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           +KA  ++E +    + ++  T+ ++I G  +  ++ +A  LF  +T+ G   DA  Y  +
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           I GLC+      A +L   MK  G  P   I
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERI 501


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 222/485 (45%), Gaps = 22/485 (4%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           R++ A    + + + G   D A    ++  LCK+ +++ A ++      SGI PD    +
Sbjct: 77  RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136

Query: 245 KLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            L+ +    G +   ++  E  E+    T T+  NS++R L  +G+++Q+  LL  +++ 
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMR- 195

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG V PN  +   ++    K+  +D A+ L   +   G   N+  Y
Sbjct: 196 --------------KGLV-PNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSY 240

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L+ GLC   R EE+ +  R++   GF P   + N + R LC       A  LV +M  
Sbjct: 241 NVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDS 300

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +   P +    +LI  L  HG+   AF+ L +M++  F P    ++  I  L    + DL
Sbjct: 301 EERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADL 360

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
            ++    +  H C P+   +N I + LC+  RV  A  +   +  K    +   Y  +I+
Sbjct: 361 VVKCLDQMIHHCCNPNDGTFNAI-AVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVIS 419

Query: 543 GWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
             C+ GN   A   L  M++  SG  PD  TY++LI GLC+ G  D+A+ ++  +EE   
Sbjct: 420 SLCRKGNTYPAFQLLYEMIQ--SGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDY 477

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
            P    F ALI G CK  R   +L  F MM  KG  P+   +  L+     E    LA E
Sbjct: 478 RPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAE 537

Query: 662 VLKEM 666
           VLKE+
Sbjct: 538 VLKEL 542



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 203/451 (45%), Gaps = 20/451 (4%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D    T LL   C S +  KA  V    I+ G + D   ++ L+    K G +  A
Sbjct: 92  GHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYA 151

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L+E+M++     N  T+  L+ G  K   ++++LQL DK+ + G   +   +  ++  
Sbjct: 152 MQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEA 211

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
             K + ++ A++L   +   G  P+    + L+T    EG     ++   +   +  N  
Sbjct: 212 AYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPN 271

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            + CN I+R L   G  ++A  L+  M   E                 SP+  +++I+I 
Sbjct: 272 VVSCNIILRSLCCEGRWEEANELVAEMDSEE----------------RSPSLVTYNILIG 315

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           +L   G++  A  +  EM +     +   +N +I  LC   + +   + L +M      P
Sbjct: 316 SLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNP 375

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T N++   LC    V  A ++++ +  + +         +I  LC+ G    AF+ L
Sbjct: 376 NDGTFNAI-AVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLL 434

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M+Q GF+PD   YS+ I GL     +D ALE+FR +  +   P +  +N +I G CK+
Sbjct: 435 YEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKS 494

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLING 543
            R   + ++F  MI KG  P+  TY +L+ G
Sbjct: 495 GRTDLSLEIFEMMILKGYTPNETTYTILVEG 525



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 208/477 (43%), Gaps = 57/477 (11%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E   +P+  SY  L+  LCK  ++      +++M++ G   +  T   L++  C  G  +
Sbjct: 125 ESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLN 184

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           ++L + ++++  G V +E   S LL A  K   VD+A +L++ +     + N  ++ VL+
Sbjct: 185 QSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLL 244

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G  K+ R ++A+Q F  +   GF  +    ++I+  LC   + E A +L +EM     +
Sbjct: 245 TGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERS 304

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P     + LI S                                 L S+G I  A+ +L 
Sbjct: 305 PSLVTYNILIGS---------------------------------LASHGRIQHAFQVLD 331

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M+                + +  P+ ++F+ II+ L K+GK DL +    +M    C  
Sbjct: 332 EMM----------------RASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNP 375

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   + N I  LC   R++ ++ +++ +       TH     +   LCR+ +   A  L+
Sbjct: 376 NDGTF-NAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLL 434

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHG---KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
            +M   G  P     + LI+ LC  G   +A+E FR L    +  + P +  ++A I G 
Sbjct: 435 YEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLE---ENDYRPILGNFNALILGF 491

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
               R DL+LE+F  +   G  P+   Y I++ G+   +    A ++  E+  + ++
Sbjct: 492 CKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVM 548



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 157/306 (51%), Gaps = 9/306 (2%)

Query: 319 TVSPNTSSFDII------INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
           T+SP  S + +        +T  +D +L+ A      + + G   +V     L+  LC S
Sbjct: 51  TISPKDSVWTLSNWKVGRKDTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKS 110

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKH 431
           N+++++  ++    ESG  P   +   +   LC+R ++  A+ LV KM   G     V +
Sbjct: 111 NKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTY 170

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
           N+ L++ LCKHG   ++ + L  ++++G +P+   +S  +      + VD A++L   I 
Sbjct: 171 NS-LVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGII 229

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A G  P++V+YN++++GLCK  R  EA   F ++ +KG  P+V + N+++   C  G  +
Sbjct: 230 AKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWE 289

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A   ++ M + E  SP ++TY  LI  L   GR   A  + +EM      P+  TF  +
Sbjct: 290 EANELVAEM-DSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPI 348

Query: 612 ITGLCK 617
           I+ LCK
Sbjct: 349 ISHLCK 354



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 60/426 (14%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L + + ++ C  +      L+R L   G + ++  L D++ R+GL VPN ++++ LLEA 
Sbjct: 154 LVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGL-VPNEFTHSFLLEAA 212

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
            K   VD     L  +   G   +  +   LL   C  G+ ++A+  F ++   G+ + +
Sbjct: 213 YKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGF-NPN 271

Query: 137 VFS--ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
           V S  I+L +    G  ++A EL+  MD      +  T+ +LI       R+  A Q+ D
Sbjct: 272 VVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLD 331

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M ++ F   AA ++ II  LCK  + ++ ++                L ++I  C +  
Sbjct: 332 EMMRASFQPSAATFNPIISHLCKEGKADLVVK---------------CLDQMIHHCCNPN 376

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           + T            N + +LC          G + +A++++Q++   +           
Sbjct: 377 DGTF-----------NAIAVLCEG--------GRVQRAFSIIQSLGNKQ----------- 406

Query: 315 IFKGTVSPNTSSFDI---IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                   N+S+ D    +I++L + G    A  L  EM Q G + + + Y++LI GLC 
Sbjct: 407 --------NSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCV 458

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              L+E+ E+ R +EE+ ++P     N++    C+      +L +   M ++G+ P    
Sbjct: 459 EGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETT 518

Query: 432 NTLLIK 437
            T+L++
Sbjct: 519 YTILVE 524



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 8/242 (3%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           SP  + +  LI  L S G ++ A  + D++ R     P+  ++N ++  LCK    DLV 
Sbjct: 304 SPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASF-QPSAATFNPIISHLCKEGKADLVV 362

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAF 145
             L +M  +    +  T   +  V C  G+  +A S+   + +      H F   ++ + 
Sbjct: 363 KCLDQMIHHCCNPNDGTFNAI-AVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSL 421

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            + G    A +L+  M       +  T+  LI G   +  +D+AL++F  + ++ +    
Sbjct: 422 CRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPIL 481

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKE 262
             ++ +I G CK+ + +++L+++  M   G TP+    + L+   + E E  L   ++KE
Sbjct: 482 GNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKE 541

Query: 263 IW 264
           ++
Sbjct: 542 LY 543


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 159/593 (26%), Positives = 272/593 (45%), Gaps = 68/593 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  S+N ++ + CK   VD+ +     +   G     Y+   L+   C  G   +AL +
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +++  HG   + V ++IL+  F   G +  A E+I+ M D  +  +  T+ +L+ G  +
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 183 KSRVDKALQLFDKMTKSGFASDAAM-YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
              +D  L L   M   GF   + + Y V++ GLCK  +++ AL L+ +++  G+TPD  
Sbjct: 359 LGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             S +I      G+  + V+ ++++        +C    RIL                  
Sbjct: 419 AYSIVIHGLCKLGKFDMAVR-VYDE--------MCYK--RIL------------------ 449

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                               PN+ +   I+  L + G L  A SL   +   G   ++ L
Sbjct: 450 --------------------PNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIIL 489

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN +IDG   S  +EE+ EL +   ESG  P   T NS+    C+ Q++  A  ++  ++
Sbjct: 490 YNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIK 549

Query: 422 VQGHEPWVKHNTLLIKEL--CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           + G  P V   T L+     C   K++E  R   +M  EG  P  V YS    GL    +
Sbjct: 550 LYGLVPSVVSYTTLMDAYANCGSIKSIEELR--REMKAEGIPPTNVTYSVIFKGLCRGWK 607

Query: 480 VD--------LALELF----RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++          LE F    RD+ + G  PD + YN II  LC+ + ++ A +LF +M +
Sbjct: 608 LENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKS 667

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           + L P+ ATYN+LI+  C  G I +A   L   L+K + S     YTT+I   C+ G P+
Sbjct: 668 QNLDPTSATYNILIDSLCIYGCIRKADRFLYS-LQKRNVSLSKFAYTTVIKAHCVKGDPE 726

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
            A++L+N++ ++G   +   + A+I  LC+      +   F +M  +G+ PD+
Sbjct: 727 MAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 250/581 (43%), Gaps = 81/581 (13%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW 148
           LK+M+D        +   +L    N  + DK   V+ EI D    +EH +S ++    + 
Sbjct: 166 LKKMKDRNLNVSTQSYNSVLY---NFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQ 219

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
            +++ A   +   +  +I  +  +F  ++  + K   VD A   F  + K G       +
Sbjct: 220 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSH 279

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSK---LITSCSDEGELTLLVKE 262
           +++I GLC    +  AL+L S+M   G+ PD   + IL K   L+   S  GE+   + +
Sbjct: 280 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLD 339

Query: 263 IWEDRDVNTMT-LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                DV T T LLC          G+ID    LL+ M+        G E+  I      
Sbjct: 340 KGLSPDVITYTILLCGQCQL-----GNIDMGLILLKDMLSR------GFELKSII----- 383

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
                + ++++ L K G++D ALSLF ++   G   ++  Y+ +I GLC   + + +  +
Sbjct: 384 ----PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRV 439

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM      P   TL              GA+ L                      LC+
Sbjct: 440 YDEMCYKRILPNSRTL--------------GAIML---------------------GLCQ 464

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G  +EA   L  ++  G   DI+ Y+  I G      ++ ALELF+     G  P+V  
Sbjct: 465 KGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVAT 524

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N +I G CK Q +AEA  + + +   GL+PSV +Y  L++ +   G+I +++  L R +
Sbjct: 525 FNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSI-KSIEELRREM 583

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE------------MEEKGCAPNRITFM 609
           + E   P  +TY+ +  GLC   + ++   +  E            ME +G  P++IT+ 
Sbjct: 584 KAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYN 643

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +I  LC+      A   F+ MK + + P    +  LI + 
Sbjct: 644 TIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 7/300 (2%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D +L + ++M       +   YN+++     ++++ + Y+ +++  E        T ++
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEH-------TYST 211

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +   LCR+Q +  A+  +R    +   P V     ++   CK G    A  F   +++ G
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCG 271

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +P +  ++  I GL  +  +  ALEL  D+  HG  PD V YNI++ G      ++ A 
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAG 331

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++  +M+ KGL P V TY +L+ G C+ GNID  ++ L  ML +      +I Y+ ++ G
Sbjct: 332 EVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSG 391

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC  GR D+A+ L+ ++E  G  P+ + +  +I GLCK  +   A+  +  M  K + P+
Sbjct: 392 LCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPN 451



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 212/497 (42%), Gaps = 52/497 (10%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
           IA    LA D+ K            L++    +G++  A  +   +  +GL  P+  +Y 
Sbjct: 292 IAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLS-PDVITYT 350

Query: 71  CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP---LLQVYCNSGQFDKALSVFNEI 127
            LL   C+  ++D+  + LK+M     G++  ++ P   +L   C +G+ D+ALS+F ++
Sbjct: 351 ILLCGQCQLGNIDMGLILLKDM--LSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDL 408

Query: 128 IDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
             +G   + V +SI++    K G+ D A  + + M    I  N +T   ++ G  +K  +
Sbjct: 409 EAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGML 468

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
            +A  L D +  SG   D  +Y+++I G  K+  +E AL+L+     SGITP+    + L
Sbjct: 469 LEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSL 528

Query: 247 ITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSI------MRILVSNGSIDQAYNLLQAM 299
           I   C  +      + E  +  DV  +  L  S+      M    + GSI     L + M
Sbjct: 529 IYGYCKTQN-----IAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREM 583

Query: 300 IKGEPIADVGVEMLMIFKGT--------------------------------VSPNTSSF 327
            K E I    V   +IFKG                                 ++P+  ++
Sbjct: 584 -KAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITY 642

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
           + II  L +   L  A  LF++M           YN LID LC    + ++   L  +++
Sbjct: 643 NTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQK 702

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
                + F   ++ +  C + D   A+ L  ++  +G    ++  + +I  LC+   A+E
Sbjct: 703 RNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIE 762

Query: 448 AFRFLTDMVQEGFLPDI 464
           +  F   M+  G  PD+
Sbjct: 763 SKYFFCLMLSRGISPDL 779


>gi|302814999|ref|XP_002989182.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
 gi|300143082|gb|EFJ09776.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
          Length = 614

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 269/579 (46%), Gaps = 33/579 (5%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELI 158
           D  T   ++   C  G  D A  + + ++D G + D    + LL    K  +V+ A +L 
Sbjct: 8   DVRTCNIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA--SDAAMYDVIIGGLC 216
           E+M    ++ +  T+ +L+HG  K  R+ +A Q      +   A      +Y+ +IGGLC
Sbjct: 68  EKMSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K  + + A+ ++ +MK         +++  +    +E  + L  +   + R  +  T   
Sbjct: 128 KVGKYDHAMAVFRKMKLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTF-- 185

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N++++ L   G   +A +++  M+  +                 SPN  +F ++++ L K
Sbjct: 186 NTVIQSLSKAGKFKEALDIVDEMVWLQ----------------CSPNELTFGLLVHGLCK 229

Query: 337 DGKLDLALSLFREMTQIGCM--QNVFLYNNLIDGLCNSNRLEESYELLREME-ESGFKPT 393
             +   A S+   M  +GC+   N+  +N +I GLC +N++ E+  L+R ME E G  P 
Sbjct: 230 AKRALEAESVLEVMDTVGCVPDPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPD 289

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFL 452
            FT N++     +  D  GAL+L ++M   G     V  NT ++  LCK G+   A   +
Sbjct: 290 EFTFNTIIDGHFKAGDSKGALSLFKEMARLGRCRCSVTLNT-VVTGLCKAGEVDRAVTLV 348

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            D         +  Y+  I     + R + + +LF+++   GC PD V + I++S  CK 
Sbjct: 349 RDSAS-ARQATVFMYNVVIDKFAKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQ 407

Query: 513 QRVAEAEDLFNEMI-TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           +R  EA +L  +M   KG   +   +N+++N   KSG ++ A   + R ++      D++
Sbjct: 408 RRTHEALELVEQMTKNKGCSWTTLPFNMVLNALAKSGEMEAAGK-VHRSMKVAGIECDLV 466

Query: 572 TYTTLIDGLCIAGRP--DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF- 628
           TY TL+DG   AGR    D   ++ E+   GCAP+ ++F AL+  LC   R   A+  F 
Sbjct: 467 TYNTLLDGYFGAGRARSGDGYRVFGELLHSGCAPDTLSFNALLGCLCCDGRLEEAVAKFW 526

Query: 629 -RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             M + +   PD      L+     + N  LA  ++ EM
Sbjct: 527 GEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDEM 565



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 246/564 (43%), Gaps = 71/564 (12%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  V  VE A  L++++ R      + ++YN LL  LCK+  +     +L      
Sbjct: 50  LLDGLFKVNKVEHAMKLYEKMSRS-FVKADAFTYNILLHGLCKAGRIQEACQKLSAALRD 108

Query: 96  GWGYDKYTL--TPLLQVYCNSGQFDKALSVFNEI-------------------------- 127
                ++ L    L+   C  G++D A++VF ++                          
Sbjct: 109 REAPVRHELLYEALIGGLCKVGKYDHAMAVFRKMKLPSSMSYNIVIAACVKRGRNEAAVE 168

Query: 128 ------IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
                 +     D   F+ ++ + SK G+  +A ++++ M       NE TF +L+HG  
Sbjct: 169 LFREMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLC 228

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGS-GITP 238
           K  R  +A  + + M   G   D  +  ++++I GLCK  ++  A  L   M+   G+ P
Sbjct: 229 KAKRALEAESVLEVMDTVGCVPDPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAP 288

Query: 239 DFEILSKLI----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           D    + +I     +   +G L+L  +     R   ++TL  N+++  L   G +D+A  
Sbjct: 289 DEFTFNTIIDGHFKAGDSKGALSLFKEMARLGRCRCSVTL--NTVVTGLCKAGEVDRAVT 346

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           L++                 +F          ++++I+   K G+ + +  LF+EM++ G
Sbjct: 347 LVRD--------SASARQATVFM---------YNVVIDKFAKLGRFEASKQLFQEMSRFG 389

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGA 413
           C  +   +  L+   C   R  E+ EL+ +M ++ G   T    N +   L +  ++  A
Sbjct: 390 CHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGCSWTTLPFNMVLNALAKSGEMEAA 449

Query: 414 LNLVRKMRVQGHE-PWVKHNTLLIKEL-CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
             + R M+V G E   V +NTLL         ++ + +R   +++  G  PD + ++A +
Sbjct: 450 GKVHRSMKVAGIECDLVTYNTLLDGYFGAGRARSGDGYRVFGELLHSGCAPDTLSFNALL 509

Query: 472 GGLIDIKRVDLALELF----RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           G L    R++ A+  F    R+     C PD V + +++   CK + +  A  + +EM+ 
Sbjct: 510 GCLCCDGRLEEAVAKFWGEMRE--RRECWPDAVTHALLVRQCCKQRNIELACRIVDEMLH 567

Query: 528 KGLIPSVATYNLLINGWCKSGNID 551
           +G +P+    ++L+N   +SG+ D
Sbjct: 568 RGFVPTPGIASMLVN-LIQSGSDD 590



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 231/562 (41%), Gaps = 74/562 (13%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N ++++LCK   VD     +  M D G   D  T   LL       + + A+ ++ E + 
Sbjct: 13  NIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY-EKMS 71

Query: 130 HGWV--DEHVFSILLVAFSKWGEVDKACELIE---RMDDCNIRLNEKTFCVLIHGFVKKS 184
             +V  D   ++ILL    K G + +AC+ +    R  +  +R +E  +  LI G  K  
Sbjct: 72  RSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVR-HELLYEALIGGLCKVG 130

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           + D A+ +F KM      S    Y+++I    K  + E A++L+ EMK     PD    +
Sbjct: 131 KYDHAMAVFRKMKLPSSMS----YNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFN 186

Query: 245 KLITSCSDEGE----LTLLVKEIWEDRDVNTMTL------LCN--------SIMRILVSN 286
            +I S S  G+    L ++ + +W     N +T       LC         S++ ++ + 
Sbjct: 187 TVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDTV 246

Query: 287 GSI-DQAYNLLQAMIKGEPIAD-VGVEMLMIFKGT----VSPNTSSFDIIINTLLKDGKL 340
           G + D        MI G   A+ VG    ++ +      V+P+  +F+ II+   K G  
Sbjct: 247 GCVPDPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDS 306

Query: 341 DLALSLFREMTQIG---------------C-------------------MQNVFLYNNLI 366
             ALSLF+EM ++G               C                      VF+YN +I
Sbjct: 307 KGALSLFKEMARLGRCRCSVTLNTVVTGLCKAGEVDRAVTLVRDSASARQATVFMYNVVI 366

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           D      R E S +L +EM   G  P   T   +    C+++    AL LV +M      
Sbjct: 367 DKFAKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGC 426

Query: 427 PWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA-- 483
            W      +++  L K G+   A +    M   G   D+V Y+  + G     R      
Sbjct: 427 SWTTLPFNMVLNALAKSGEMEAAGKVHRSMKVAGIECDLVTYNTLLDGYFGAGRARSGDG 486

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA-EDLFNEMITKG-LIPSVATYNLLI 541
             +F ++   GC PD +++N ++  LC   R+ EA    + EM  +    P   T+ LL+
Sbjct: 487 YRVFGELLHSGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERRECWPDAVTHALLV 546

Query: 542 NGWCKSGNIDQAMLCLSRMLEK 563
              CK  NI+ A   +  ML +
Sbjct: 547 RQCCKQRNIELACRIVDEMLHR 568



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 3/225 (1%)

Query: 26  CFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           C   P    F  +I  L     V EA+ L  +++ E    P+ +++N +++   K+    
Sbjct: 248 CVPDPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSK 307

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLV 143
                 KEM   G      TL  ++   C +G+ D+A+++  +          ++++++ 
Sbjct: 308 GALSLFKEMARLGRCRCSVTLNTVVTGLCKAGEVDRAVTLVRDSASARQATVFMYNVVID 367

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFA 202
            F+K G  + + +L + M       +  TF +L+    K+ R  +AL+L ++MTK+ G +
Sbjct: 368 KFAKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQRRTHEALELVEQMTKNKGCS 427

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
                +++++  L K+ ++E A +++  MK +GI  D    + L+
Sbjct: 428 WTTLPFNMVLNALAKSGEMEAAGKVHRSMKVAGIECDLVTYNTLL 472



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 16/116 (13%)

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
            S DV T   ++D LC  G  DDA  L + M +KG  P+ +T  +L+ GL K ++   A+
Sbjct: 5   ASLDVRTCNIMVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAM 64

Query: 626 VHFRMMKEKGMKPDMFVFVAL----------------ISAFLSELNPPLAFEVLKE 665
             +  M    +K D F +  L                +SA L +   P+  E+L E
Sbjct: 65  KLYEKMSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYE 120


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 159/604 (26%), Positives = 262/604 (43%), Gaps = 50/604 (8%)

Query: 90  KEMQDYGWGYD-------KYTLTPLLQVYCNS-GQFDKALSV------------FNEIID 129
           K + +YG   D       +Y  TPLL+   NS    D    V            F  +  
Sbjct: 52  KPLNEYGSSGDLNSVPNRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVES 111

Query: 130 HGWVDEHVFSILLVAF-SKWGEVDKACELIERMDDCNIRLN-EKTFCVLIHGFVKKSRVD 187
           +  V   ++  LL +  S    +  A  L+  ++  N+  + E  + +LIH   +  ++ 
Sbjct: 112 YRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKLY 171

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A  L  + T +        Y+ +IG   +N  LE AL L S M+  G   DF   S +I
Sbjct: 172 EAFLLSQRQTLTPLT-----YNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFII 226

Query: 248 -----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                T+ SD   L  +  EI  D+ +     L N I+     +G +++A + L AM++G
Sbjct: 227 QSLTRTNKSDSSMLQKIYAEIESDK-IELDGQLLNDIIVGFAKSGDVNRAMSFL-AMVQG 284

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            +SP T++   +I  L   G+ + A ++F E+ + G M     Y
Sbjct: 285 ---------------NGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY 329

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N L+ G   +  L+++  ++ EME SGF P   T + +            A  ++++M  
Sbjct: 330 NALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEA 389

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P     + ++      GK  ++F+ L +M   G  PD   Y+  I        +D 
Sbjct: 390 SGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 449

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL  F  +   G  PD V +N +I   CK+    +AE+LF  M   G  P   TYN++IN
Sbjct: 450 ALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMIN 509

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            + +    +     L +M + +    +V+TYTTL+D    +GR  DAI     M+  G  
Sbjct: 510 SFGEQERWEDVKTLLGKM-QSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLK 568

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+   + ALI    +      A+  FR+M+  G+KP + V  +LI+AF  +     AF V
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628

Query: 663 LKEM 666
           L+ M
Sbjct: 629 LQYM 632



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 199/481 (41%), Gaps = 86/481 (17%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I  LG+ G  EEA  +F+++K  GL +P   +YN LL+                     
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGL-MPRTRAYNALLKG-------------------- 335

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
                          Y  +G    A S+ +E+   G+  DEH +S+L+ A++  G  + A
Sbjct: 336 ---------------YVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA 380

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +++ M+   +R N   F  ++  +  + +  K+ Q+  +M  SG + D   Y+V+I  
Sbjct: 381 RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDT 440

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             K   L+ AL  +  M+  G+ PD                                  +
Sbjct: 441 FGKCNCLDHALATFDRMRMEGVQPD---------------------------------AV 467

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N+++     +G  ++A  L +AM +                   SP T++++I+IN+ 
Sbjct: 468 TWNTLIDCHCKSGHHNKAEELFEAMQES----------------GCSPCTTTYNIMINSF 511

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            +  + +   +L  +M   G + NV  Y  L+D    S R +++ E L  M+  G KP+ 
Sbjct: 512 GEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSS 571

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
              N++     +R     A+N  R MR  G +P V     LI    +  +  EAF  L  
Sbjct: 572 TMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQY 631

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M +    PD+V Y+  +  LI +++ D    ++ ++   GC PD  A  ++ S L   +R
Sbjct: 632 MKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALRYMER 691

Query: 515 V 515
            
Sbjct: 692 T 692



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 233/552 (42%), Gaps = 74/552 (13%)

Query: 132 WVDEH--------VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           W++ H        ++SIL+ A  +  ++ +A  L +R       L   T+  LI    + 
Sbjct: 143 WLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQT-----LTPLTYNALIGACARN 197

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL--QLYSEMKGSGITPDFE 241
             ++KAL L  +M + GF SD   Y  II  L +  + + ++  ++Y+E++   I  D +
Sbjct: 198 DDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQ 257

Query: 242 ILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQA------- 292
           +L+ +I   +  G++   +    + +   ++  T    +++  L + G  ++A       
Sbjct: 258 LLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEEL 317

Query: 293 -----------YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                      YN LL+  +K   + D    +  + +   SP+  ++ ++I+     G+ 
Sbjct: 318 KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRW 377

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A  + +EM   G   N ++++ ++    +  + ++S+++LREM  SG  P     N M
Sbjct: 378 ESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVM 437

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                +   +  AL    +MR++G +P       LI   CK G                 
Sbjct: 438 IDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH--------------- 482

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
                               + A ELF  +   GC P    YNI+I+   + +R  + + 
Sbjct: 483 --------------------NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKT 522

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDG 579
           L  +M ++GL+ +V TY  L++ + +SG    A+ CL  M  K  G  P    Y  LI+ 
Sbjct: 523 LLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVM--KSVGLKPSSTMYNALINA 580

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
               G  + AI  +  M   G  P+ +   +LI    +  R   A    + MKE  +KPD
Sbjct: 581 YAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPD 640

Query: 640 MFVFVALISAFL 651
           +  +  L+ A +
Sbjct: 641 VVTYTTLMKALI 652



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 223/532 (41%), Gaps = 27/532 (5%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           CF        LI  LG    + EA +L    +R+ L      +YN L+ A  ++  ++  
Sbjct: 150 CFSYELLYSILIHALGRSEKLYEAFLL---SQRQTLTP---LTYNALIGACARNDDLEKA 203

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL--SVFNEI-IDHGWVDEHVFSILL 142
              +  M+  G+  D    + ++Q    + + D ++   ++ EI  D   +D  + + ++
Sbjct: 204 LNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDII 263

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
           V F+K G+V++A   +  +    +     T   +I       R ++A  +F+++ + G  
Sbjct: 264 VGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLM 323

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLV 260
                Y+ ++ G  K   L+ A  + SEM+ SG +PD    S LI + ++ G  E   +V
Sbjct: 324 PRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIV 383

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            +  E   V   + + + I+      G   +++ +L+ M                    V
Sbjct: 384 LKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS----------------GV 427

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           SP+   ++++I+T  K   LD AL+ F  M   G   +   +N LID  C S    ++ E
Sbjct: 428 SPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE 487

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L   M+ESG  P   T N M      ++       L+ KM+ QG    V   T L+    
Sbjct: 488 LFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYG 547

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           + G+  +A   L  M   G  P    Y+A I         + A+  FR + A G  P V+
Sbjct: 548 QSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVL 607

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
             N +I+   + +R AEA  +   M    L P V TY  L+    +    D+
Sbjct: 608 VLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDK 659


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 145/582 (24%), Positives = 254/582 (43%), Gaps = 22/582 (3%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  S N LLE+L        V      +   G   D +    ++Q    +G  D AL+
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 123 VFNEI-IDHGWVDEHVFSILLVAFSKW--GEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           +   +    G      FS  +V    W  G+   A ++ + M D  +  N  T+  +I G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            VK   ++   +L D+M   G   +   Y+V++ GLC+  +++    L  EM    + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQ 297
               S L    +  GE   ++    E      M     C+ ++  L  +G + +A  +L+
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
                          +++  G V P T  ++ +IN   +   L  A  +F +M       
Sbjct: 359 ---------------MLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRP 402

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +   YN LI+GLC    + ++ +L+ EME+SG  P+  T N++         +     ++
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
             M+ +G +  V     ++K  CK+GK  EA   L DM+ +   P+   Y++ I   I+ 
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
              + A  L   +   G    +V YN+++ GLC++ ++ EAE+L   +  +GL P V +Y
Sbjct: 523 GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           N +I+  C  G+ D+A+  L  M  K    P + TY TL+  L  AGR  D   L+ +M 
Sbjct: 583 NTIISACCNKGDTDKALELLQEM-NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 641

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            K   P+   +  ++    +C+         + M EKG+  D
Sbjct: 642 HKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 229/538 (42%), Gaps = 55/538 (10%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A  +  +I  L   G   +A  +FD++   G+ VPN  +YN +++   K   ++    
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV-VPNWITYNTMIDGHVKGGDLE-AGF 249

Query: 88  RLK-EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAF 145
           RL+ +M   G   +  T   LL   C +G+ D+   + +E+  H  + D   +SIL    
Sbjct: 250 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 309

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           ++ GE      L        + L   T  +L++G  K  +V KA Q+ + +  +G     
Sbjct: 310 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 369

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            +Y+ +I G C+ + L  A  ++ +MK   I PD    + LI                  
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING---------------- 413

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                    LC                   L+ + K E   D+ +EM    K  V P+  
Sbjct: 414 ---------LCK------------------LEMVTKAE---DLVMEM---EKSGVDPSVE 440

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ +I+     G+L+   ++  +M Q G   +V  + +++   C + ++ E+  +L +M
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 P     NS+        D   A  LV KM+  G    +    LL+K LC+  + 
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   +  +  +G  PD+V Y+  I    +    D ALEL +++  +G  P +  Y+ +
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 620

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +S L  A RV + E L+ +M+ K + PS + Y ++++ + +  N  +       M EK
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 211/445 (47%), Gaps = 19/445 (4%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y  I+     N Q   AL L++ M  S   P     ++L++  +      +++    + +
Sbjct: 51  YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110

Query: 268 DVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
            +    LLC  N +M  +  +    +A   L  M+K      +G E          P+  
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK------LGFE----------PDLV 154

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F  ++N      +++ A++LF ++  +G   NV  Y  LI  LC +  L  + EL  +M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
             +G +P   T N++   LC       A  L+R M  +  EP V   T LI    K GK 
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
           MEA      M+Q    PD+  Y + I GL     +D A ++F  +  +GC P+ V Y  +
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I G CK++RV +   +F EM  KG++ +  TY +LI G+C  G  D A    ++M  + +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD+ TY  L+DGLC  G+ + A+M++  M ++    N +T+  +I G+CK  +   A 
Sbjct: 395 -PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
             F  +  KGMKP++  +  +IS F
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGF 478



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 167/342 (48%), Gaps = 1/342 (0%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           SS+  I+   L + + + AL LF  M     + ++  +  L+  +   NR +    L  +
Sbjct: 49  SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M+  G  P   T N +  C+C       A   + KM   G EP +   T L+   C   +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A      ++  GF P++V Y+  I  L   + ++ A+ELF  +  +G  P+VV YN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +++GLC+  R  +A  L  +M+ + + P+V T+  LI+ + K G + +A    + M++  
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM- 287

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           S  PDV TY +LI+GLC+ G  D+A  ++  ME  GC PN + +  LI G CK  R    
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  F  M +KG+  +   +  LI  +     P +A EV  +M
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 211/466 (45%), Gaps = 66/466 (14%)

Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD---------DCN 165
           QF+ AL +F  ++    +   + F+ LL   +K    D    L E+M           CN
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 166 IRLN--------------------------EKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
           I ++                            TF  L++G+   +R++ A+ LFD++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD---EGEL 256
           GF  +   Y  +I  LCKN+ L  A++L+++M  +G  P+    + L+T   +    G+ 
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 257 TLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             L++++ + R   +V T T L ++ +++    G + +A  L   MI             
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKV----GKLMEAKELYNVMI------------- 285

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              + +V P+  ++  +IN L   G LD A  +F  M + GC  N  +Y  LI G C S 
Sbjct: 286 ---QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           R+E+  ++  EM + G      T   + +  CL  R DV  A  +  +M  +   P ++ 
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV--AQEVFNQMSSRRAPPDIRT 400

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +L+  LC +GK  +A      M +     +IV Y+  I G+  + +V+ A +LF  + 
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
           + G  P+V+ Y  +ISG C+   + EA+ LF +M   G +P+ + Y
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 152/330 (46%), Gaps = 20/330 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIRCL     +  A  LF+Q+   G   PN  +YN L+  LC+          L++M   
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               +  T T L+  +   G+  +A  ++N +I    + D   +  L+     +G +D+A
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++   M+      NE  +  LIHGF K  RV+  +++F +M++ G  ++   Y V+I G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS--CSDEGELTLLVKEIWEDRDVNTM 272
            C   + ++A +++++M      PD    + L+    C+ + E  L++ E    R+++  
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            +    I++ +   G ++ A++L  ++                F   + PN  ++  +I+
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSL----------------FSKGMKPNVITYTTMIS 476

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
              + G +  A SLF++M + G + N  +Y
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  L   GL++EA  +F  ++R G C PN   Y  L+   CKS  V+       EM 
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNG-CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVD 152
             G   +  T T L+Q YC  G+ D A  VFN++       D   +++LL      G+V+
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA  + E M    + +N  T+ ++I G  K  +V+ A  LF  +   G   +   Y  +I
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPD 239
            G C+   +  A  L+ +MK  G  P+
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDGFLPN 502


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 211/438 (48%), Gaps = 17/438 (3%)

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG---SID-------- 290
           I++++ T+  D      L+++ W + +++        +   +++ G   S+D        
Sbjct: 131 IVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISH 190

Query: 291 --QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
             +  + ++  +KGE +  +  EM +  KG + PN  +++ +I  L K GK+  A  + R
Sbjct: 191 LSEDLDGIKIALKGEWVLKLIEEMQI--KG-LKPNPYTYNGVILLLCKTGKVAEAERVLR 247

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM   G   +  +Y  LIDG C    +  +Y L  EM++    P   T  ++   LC+  
Sbjct: 248 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG 307

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            V+ A  L  +M  +  EP     T LI   CK GK  EAF     M+Q G  P+IV Y+
Sbjct: 308 RVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 367

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           A   GL     VD A EL  ++C  G   ++  YN +++GLCKA  + +A  L  +M   
Sbjct: 368 ALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 427

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G  P   TY  L++ +CKS  + +A   L +ML++E   P V+T+  L++G C++G  +D
Sbjct: 428 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL-QPTVVTFNVLMNGFCMSGMLED 486

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L   M EKG  PN  T+ +LI   C  +  RA    +R M  KG+ PD   +  LI 
Sbjct: 487 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 546

Query: 649 AFLSELNPPLAFEVLKEM 666
                 N   A+ + ++M
Sbjct: 547 GHCKARNMKEAWFLHRDM 564



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 192/450 (42%), Gaps = 50/450 (11%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           +LIE M    ++ N  T+  +I    K  +V +A ++  +M   G A D  +Y  +I G 
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK   +  A +L+ EM+   I+PDF                            +    ++
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDF----------------------------ITYTAVI 300

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           C      L   G + +A  L   M+                   + P+  ++  +I+   
Sbjct: 301 CG-----LCQTGRVMEADKLFHEMVCKR----------------LEPDEVTYTALIDGYC 339

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+GK+  A SL  +M Q+G   N+  Y  L DGLC    ++ + ELL EM   G +   +
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T NS+   LC+  ++  A+ L++ M V G  P     T L+   CK  + + A   L  M
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +     P +V ++  + G      ++   +L + +   G  P+   YN +I   C    +
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
               +++  M  KG++P   TYN+LI G CK+ N+ +A   L R +  +  +  V +Y  
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF-LHRDMVGKGFNLTVSSYNA 578

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           LI G     +  +A  L+ +M  +G   +R
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADR 608



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 235/564 (41%), Gaps = 98/564 (17%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK---------EMQDYG 96
           V  A  LFD++   GL +  + S N  +  L  S  +D +++ LK         EMQ  G
Sbjct: 162 VSFARKLFDKMLNYGLLISVD-SCNLFISHL--SEDLDGIKIALKGEWVLKLIEEMQIKG 218

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKAC 155
              + YT   ++ + C +G+  +A  V  E+I  G   D  +++ L+  F K G V  A 
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L + M    I  +  T+  +I G  +  RV +A +LF +M       D   Y  +I G 
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
           CK  +++ A  L+++M   G+TP+                             + T T L
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPN-----------------------------IVTYTAL 369

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            + + +     G +D A  LL  M +       G+E+          N  +++ ++N L 
Sbjct: 370 ADGLCKC----GEVDTANELLHEMCRK------GLEL----------NIYTYNSLVNGLC 409

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K G +D A+ L ++M   G   +   Y  L+D  C S  +  ++ELLR+M +   +PT  
Sbjct: 410 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 469

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N                                   +L+   C  G   +  + L  M
Sbjct: 470 TFN-----------------------------------VLMNGFCMSGMLEDGEKLLKWM 494

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +++G +P+   Y++ I        +    E++R +CA G  PD   YNI+I G CKA+ +
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 554

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  L  +M+ KG   +V++YN LI G+ K     +A     +M  +E    D   Y  
Sbjct: 555 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM-RREGLVADREIYNI 613

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEK 599
             D     G+ +  + L +E  EK
Sbjct: 614 FADINYDEGKMELTLELCDEAIEK 637



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 2/195 (1%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+ AN L  ++ R+GL + N Y+YN L+  LCK+ ++D     +K+M+  G+  D  T
Sbjct: 377 GEVDTANELLHEMCRKGLEL-NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            T L+  YC S +  +A  +  +++D       V F++L+  F   G ++   +L++ M 
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  I  N  T+  LI  +  ++ +    +++  M   G   D   Y+++I G CK + ++
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 555

Query: 223 MALQLYSEMKGSGIT 237
            A  L+ +M G G  
Sbjct: 556 EAWFLHRDMVGKGFN 570


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 180/345 (52%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P    FD +++ L++       LSL + +  +   ++VF +N LI+      R++ ++ +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L ++ + GF+P   T +S+   LC       A+    +M   G++P +     +IK  CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK   A   L  M + G  PDIV Y+  I GL   + V  AL++F +I   G  PDV  
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y+I++ GLC + +  EA  LFNEM++  ++P V T+N+L++  CK G + +A   +  M+
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           EK    P+  TY +L++G C+  +  +A M+++ M  KGC PN +++  LI G CK  R 
Sbjct: 322 EK-GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             A   F  M  +G+ P+ F +  LIS          A E+ K+M
Sbjct: 381 DEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 211/430 (49%), Gaps = 30/430 (6%)

Query: 216 CKNKQLEMALQLYSEMKGSGITP---DFEILSKLITSCSDEGELTLLVKEI---WEDRDV 269
           C    +E AL  ++ M      P   +F+ L   +      G +  L K I     +RDV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK--GEPIA-------------DVGVEMLM 314
               +L N   R+      +D A+++L  +IK   EP A             D     + 
Sbjct: 120 FHFNILINCFSRL----QRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175

Query: 315 IFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
            F   V+    PN  +++ II    K GK  +A+ L ++M + G   ++ +YN +IDGLC
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               + E+ ++  E++  G +P  FT + +   LC       A  L  +M      P V 
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              +L+ +LCK G   EA   +  M+++G  P+   Y++ + G     +V  A  +F  +
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+VV+YNI+I+G CKAQR+ EA +LF+EM  +GLIP+   YN LI+G C++G  
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
            +A   L + ++ +  SPD++T T L+D LC  G  D+A+ L+  M++    PN +T+  
Sbjct: 416 CEARE-LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDI 474

Query: 611 LITGLCKCDR 620
           LI  + K  +
Sbjct: 475 LIRAMYKSGK 484



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 206/458 (44%), Gaps = 25/458 (5%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G G  KY      Q  C+    + AL  FN +I    +   V F  LL A  +       
Sbjct: 50  GSGRQKY------QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTV 103

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L +R++   I  +   F +LI+ F +  RVD A  +  K+ K GF  DA  +  +I G
Sbjct: 104 LSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLING 163

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTM 272
           LC   +   A++ + EM  SG  P+    + +I      G+ T+ V   +  +       
Sbjct: 164 LCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPD 223

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            ++ N+I+  L  +  + +A ++    IKG              KG V P+  ++ I+++
Sbjct: 224 IVIYNTIIDGLCKDRLVSEALDIFSE-IKG--------------KG-VRPDVFTYSILMH 267

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L    + + A +LF EM  +  M +V  +N L+D LC    L E+  +++ M E G +P
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP 327

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
            + T NS+    C +  V  A  +   M  +G  P V    +LI   CK  +  EA    
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELF 387

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G +P+   Y+  I GL    R   A ELF+D+ A GC PD+V   I++  LCK 
Sbjct: 388 DEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKL 447

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +  A  LF  M    L P++ TY++LI    KSG I
Sbjct: 448 GYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 140/285 (49%), Gaps = 29/285 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   YN +++ LCK   V        E++  G   D +T + L+   CNS Q ++A ++
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           FNE++    + + V F+IL+    K G + +A  +I+ M +  +  N  T+  L++G+  
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           +++V +A  +FD M   G   +   Y+++I G CK ++++ A +L+ EM   G+ P+   
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN 401

Query: 243 LSKLITSCSDEGELTLLVKEIWEDR-------DVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            + LI+     G      +E+++D        D+ T T+L +S+ ++    G +D A  L
Sbjct: 402 YNTLISGLCQAGR-HCEARELFKDMQAQGCSPDLVTCTILLDSLCKL----GYLDNALRL 456

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
            +AM                    + PN  ++DI+I  + K GK+
Sbjct: 457 FRAMQ----------------DSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           V EA M+FD +  +G C+PN  SYN L+   CK+  +D       EM   G   + +   
Sbjct: 345 VFEARMVFDAMITKG-CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYN 403

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDC 164
            L+   C +G+  +A  +F ++   G   + V  +ILL +  K G +D A  L   M D 
Sbjct: 404 TLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS 463

Query: 165 NIRLNEKTFCVLIHGFVKKSRV 186
            ++ N  T+ +LI    K  ++
Sbjct: 464 CLKPNLVTYDILIRAMYKSGKI 485


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 226/488 (46%), Gaps = 23/488 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A  LF +M ++      A +  ++  +   K     + L+ E+    I     ILS 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 246 LITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG- 302
           ++ SC      +L   V  I   + +    +   +++R L +   +  A +L + +++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 303 --EP----------------IADVGVEMLMIF-KGTVSPNTSSFDIIINTLLKDGKLDLA 343
             EP                      ++L +  +G+  PNT ++ I+I+   KDG LD A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            SL  EM Q     ++F Y+ LID LC  ++ E    L  EM      P   T NS+   
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+   V  A  ++R M  +G +P V    ++I      G+   A      M+ +   PD
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ Y+  I G    K++D A+++ R+I   G  P +V  N+++ GL +  R   A++ F+
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM++ G IP + T+  L+ G+ K+G +++AM    + LE+     ++  YT +IDGLC  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRREDTNIQIYTAVIDGLCKN 471

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+ D A   + ++   G  P+ IT+ A+I+G C+      A    R M++ G   D   +
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTY 531

Query: 644 VALISAFL 651
             ++  FL
Sbjct: 532 NVIVRGFL 539



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 237/543 (43%), Gaps = 26/543 (4%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           +V  +++A  LF Q+ R    +P+  S++ LL+A+        V    +E+        +
Sbjct: 49  NVKCLDDAFSLFRQMVRTK-PLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHE 107

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
           + L+ ++   C   + D   SV       G   +E  F+ L+       +V  A  L ++
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKK 167

Query: 161 MDDCNI-RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           +   NI   NE  +  +++G  KK    KA  L   M +     +   Y ++I   CK+ 
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDG 227

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSD----EGELTLLVKEIWEDRDVNTMTLL 275
            L+ A  L +EMK   I PD    S LI +       E   TL ++ I  +   N  T  
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF- 286

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            NS++  L   G ++ A  +++ MI+               KG V P+  ++++II+   
Sbjct: 287 -NSVIDGLCKEGKVEDAEEIMRYMIE---------------KG-VDPDVITYNMIIDGYG 329

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G++D A  +F  M       ++  YN LI+G     +++E+ ++ RE+ + G KP+  
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +   L        A N   +M   GH P +  +  L+    K+G   EA      +
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +     +I  Y+A I GL    ++D A   F  +   G  PDV+ Y  +ISG C+   +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA+D+  +M   G +    TYN+++ G+ +S  + +    L  +  K S S +  T   
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK-SFSFEAATVEL 568

Query: 576 LID 578
           L+D
Sbjct: 569 LMD 571



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/544 (22%), Positives = 240/544 (44%), Gaps = 25/544 (4%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP-NNYSYNCLLEA 75
           L + +V+++   S  +   L++ +  +        LF ++ +  L +P + +  + ++ +
Sbjct: 59  LFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK--LRIPVHEFILSIVVNS 116

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD- 134
            C     DL    L      G  Y++ T T L++      +   A+ +F +++     + 
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEP 176

Query: 135 -EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
            E ++  ++    K G   KA +L+  M+  + + N +T+ ++I  F K   +D A  L 
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLL 236

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           ++M +     D   Y  +I  LCK  Q E    L+ EM    I P+    + +I     E
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKE 296

Query: 254 GELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
           G++    +EI     ++ V+   +  N I+      G +D+A  +  +MI          
Sbjct: 297 GKVED-AEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK-------- 347

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                   ++ P+  S++I+IN   +  K+D A+ + RE++Q G   ++   N L+ GL 
Sbjct: 348 --------SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLF 399

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
              R + +     EM  +G  P  +T  ++     +   V  A++   K+  +  +  ++
Sbjct: 400 ELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T +I  LCK+GK  +A      +   G  PD++ Y+A I G      +D A ++ R +
Sbjct: 460 IYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +GC  D   YN+I+ G  ++ +V+E +    E+  K      AT  LL++   +  +I
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSI 579

Query: 551 DQAM 554
            + M
Sbjct: 580 TRKM 583



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 37/256 (14%)

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--------------CA 492
           +AF     MV+   LP +  +S  +  ++ +K     + LFR+I                
Sbjct: 55  DAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 493 HGCC---------------------PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           + CC                      + V +  +I GL    +V +A  LF +++ + + 
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 532 -PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+   Y  ++NG CK G+  +A   L R++E+ S  P+  TYT +ID  C  G  D A 
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L NEM++K   P+  T+  LI  LCK  +       F  M    + P++  F ++I   
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 651 LSELNPPLAFEVLKEM 666
             E     A E+++ M
Sbjct: 294 CKEGKVEDAEEIMRYM 309


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 227/470 (48%), Gaps = 28/470 (5%)

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
           + + +Y+VII    +++ L+ ++  ++EM   G  P     + L+T              
Sbjct: 92  TKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCF 151

Query: 263 IWEDR-----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
             E +     DV +  +    +++     G I+++++LL             VE+     
Sbjct: 152 FNESKIKVVLDVYSFGI----VIKGCCEAGEIEKSFDLL-------------VELREF-- 192

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
              SPN   +  +I+   K G+++ A  LF EM + G + N + Y  LI GL  +   ++
Sbjct: 193 -GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLI 436
            +E+  +M+E G  P  +T N +   LC+      A  +  +MR +G     V +NTL I
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL-I 310

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC+  KA EA + +  M      P+++ Y+  I G   + ++  AL L RD+ + G  
Sbjct: 311 GGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLS 370

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P +V YN+++SG C+    + A  +  EM  +G+ PS  TY +LI+ + +S N++ A+  
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
            S M E+    PDV TY+ LI G CI G+ ++A  L+  M EK   PN + +  +I G C
Sbjct: 431 RSSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYC 489

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K      AL  FR M+EK + P++  +  LI     E     A +++++M
Sbjct: 490 KEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 239/527 (45%), Gaps = 66/527 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV------AFSKWGEVDKACELIE 159
           ++  Y  S   D ++  FNE++D G+V   + F+ LL       +F++W      C   E
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQW-----WCFFNE 154

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
                 + L+  +F ++I G  +   ++K+  L  ++ + GF+ +  +Y  +I G CK  
Sbjct: 155 --SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           ++E A  L+ EM                      G+  L+  E W      T T+L + +
Sbjct: 213 EIEKAKDLFFEM----------------------GKFGLVANE-W------TYTVLIHGL 243

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            +    NG   Q + + + M +                  V PN  +++ ++N L KDG+
Sbjct: 244 FK----NGIKKQGFEMYEKMQEH----------------GVFPNLYTYNCVMNQLCKDGR 283

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A  +F EM + G   N+  YN LI GLC   +  E+ +++ +M+     P   T N+
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    +  AL+L R ++ +G  P +    +L+   C+ G    A + + +M + G
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             P  V Y+  I        ++ A++L   +   G  PDV  Y+++I G C   ++ EA 
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            LF  M+ K L P+   YN +I G+CK G+  +A+     M EKE  +P+V +Y+ LI  
Sbjct: 464 RLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL-APNVASYSYLIRV 522

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
           LC   +  +A  L  +M + G  P+  T   LI+   K D P A ++
Sbjct: 523 LCKERKLKEAEDLVEKMIDSGIDPSD-TICNLIS-RAKTDSPVAQII 567



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 215/473 (45%), Gaps = 16/473 (3%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  ++ A  +S S+D       EM D G+         LL     S  F++    FNE  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
               +D + F I++    + GE++K+ +L+  + +     N   +  LI G  KK  ++K
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A  LF +M K G  ++   Y V+I GL KN   +   ++Y +M+  G+ P+    + ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
               +G      K   E R+     + CN +             YN L   +  E  A+ 
Sbjct: 277 QLCKDGRTKDAFKVFDEMRE---RGVSCNIV------------TYNTLIGGLCREMKANE 321

Query: 309 GVEMLMIFKGTV-SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
             +++   K  V +PN  +++ +I+     GKL  ALSL R++   G   ++  YN L+ 
Sbjct: 322 ANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVS 381

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           G C       + ++++EMEE G KP+  T   +     R  ++  A+ L   M   G  P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVP 441

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V   ++LI   C  G+  EA R    MV++   P+ V Y+  I G         AL LF
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF 501

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           RD+      P+V +Y+ +I  LCK +++ EAEDL  +MI  G+ PS    NL+
Sbjct: 502 RDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 187/404 (46%), Gaps = 20/404 (4%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           YS+  +++  C++  ++     L E++++G+  +    T L+   C  G+ +KA  +F E
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 127 IIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +   G V +E  +++L+    K G   +  E+ E+M +  +  N  T+  +++   K  R
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
              A ++FD+M + G + +   Y+ +IGGLC+  +   A ++  +MK   I P+    + 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 246 LITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI--KGE 303
           LI      G+L    K +   RD+ +  L  + +             YN+L +    KG+
Sbjct: 344 LIDGFCSVGKLG---KALSLCRDLKSRGLSPSLV------------TYNVLVSGFCRKGD 388

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                 +   M  +G + P+  ++ I+I+T  +   ++ A+ L   M ++G + +V  Y+
Sbjct: 389 TSGAAKMVKEMEERG-IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYS 447

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LI G C   ++ E+  L + M E   +P     N+M    C+      AL L R M  +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP-DIVC 466
              P V   + LI+ LCK  K  EA   +  M+  G  P D +C
Sbjct: 508 ELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 183/400 (45%), Gaps = 22/400 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G +I+     G +E++  L  +++  G   PN   Y  L++  CK   ++  +    E
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFS-PNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M  +G   +++T T L+     +G   +   ++ ++ +HG + + + ++ ++    K G 
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
              A ++ + M +  +  N  T+  LI G  ++ + ++A ++ D+M       +   Y+ 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR 267
           +I G C   +L  AL L  ++K  G++P     + L++    +G+ +    +VKE+ E+R
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM-EER 402

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            +    +    ++     + +++ A  L  +M       ++G          + P+  ++
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMETAIQLRSSM------EELG----------LVPDVHTY 446

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            ++I+     G+++ A  LF+ M +     N  +YN +I G C       +  L R+MEE
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEE 506

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
               P   + + + R LC+ + +  A +LV KM   G +P
Sbjct: 507 KELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546


>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
 gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
          Length = 506

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 239/508 (47%), Gaps = 32/508 (6%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQL 227
           N  T+  ++    K  R+D+A +LF  M  S     +A  Y  +I GLC   +LE A+ L
Sbjct: 3   NVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVLL 62

Query: 228 YSEM--KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---NSIMRI 282
              +  K S + P   ++ +   +C + G L   + E+ +D   N  TL     N  +R 
Sbjct: 63  LDAVYFKLSWLVPATYLIIRF-KACHERGNLRATI-ELLKDMAENGSTLSIQDLNGCLRG 120

Query: 283 LVSNGSIDQA-------------------YNLLQAMIKGEPIADVGVEMLMIFKGT-VSP 322
           L   G++D A                   Y++L A +      +   E+L   +   +  
Sbjct: 121 LCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEA 180

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +  ++ +II++L K G +D A  L   M    C+ +  +Y+ +I+ L  + R++E+ E+ 
Sbjct: 181 DKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIA 240

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           +E +         T NS+     + + +   + +  +M   G  P +    +L + L +H
Sbjct: 241 KEADAKHCTSV-VTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRH 299

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G    A++ L  M Q+G LPD V +++ I GL++  R   A+ L +++ + GC P+ + Y
Sbjct: 300 GLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITY 359

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            I++  L +  R  E  +LF  ++ + L P+V TYN +++  CK+G +DQA      ML 
Sbjct: 360 TILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLA 419

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
            +   P+ ITY  LI GLC+    + A++L + M ++ CAP+   +  ++   CK  R  
Sbjct: 420 SDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRID 479

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAF 650
            A   F +++      D  +F  L+ A 
Sbjct: 480 EA---FELLERMPFAGDKVMFRTLVRAL 504



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 240/561 (42%), Gaps = 61/561 (10%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
            PN Y+YN ++ ALCK+  +D        M        +  T   L+   C   + ++A+
Sbjct: 1   APNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAV 60

Query: 122 SVFNEI-IDHGWVDEHVFSIL-LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            + + +     W+    + I+   A  + G +    EL++ M +    L+ +     + G
Sbjct: 61  LLLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRG 120

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             K   VD AL+ F +  K+ F+  A++  Y +++  L   K+     ++  EM+  G+ 
Sbjct: 121 LCKAGNVDGALEFF-REAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLE 179

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
            D +  S +I S                         LC S        G +D+A  L++
Sbjct: 180 ADKDTYSLIIHS-------------------------LCKS--------GMVDKAKVLVE 206

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI    +                P+   +D +I  L K G++D A+ + +E     C  
Sbjct: 207 RMISRNCV----------------PDARIYDPVIEELSKTGRVDEAVEIAKEADAKHC-T 249

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  YN+L+ G   + RL+   ++   M  +G  P  +T N +F  L R      A  L+
Sbjct: 250 SVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLL 309

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M   G  P       LI  L +  +   A   + +MV  G  P+ + Y+  +  L   
Sbjct: 310 PRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARN 369

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA-T 536
            R D  +ELF+ +      P+V  YN ++S LCKA R+ +A  LF  M+     P  A T
Sbjct: 370 ARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAIT 429

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y  LI+G C    +++A+L L  M +++  +PDV  Y T++   C  GR D+A  L   M
Sbjct: 430 YRALIHGLCLKMELERAVLLLDAMAKRDC-APDVACYGTIVAAFCKQGRIDEAFELLERM 488

Query: 597 EEKGCAPNRITFMALITGLCK 617
              G   +++ F  L+  LCK
Sbjct: 489 PFAG---DKVMFRTLVRALCK 506



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/517 (22%), Positives = 203/517 (39%), Gaps = 26/517 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ-D 94
           ++  L   G +++A+ LF  +       PN  +Y  L+  LC    ++   + L  +   
Sbjct: 10  VMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVLLLDAVYFK 69

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDK 153
             W      L    +     G     + +  ++ ++G  +     +  L    K G VD 
Sbjct: 70  LSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDG 129

Query: 154 ACELI-ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           A E   E  +  ++R +  T+ +L+       R +   ++  +M   G  +D   Y +II
Sbjct: 130 ALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLII 189

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN-- 270
             LCK+  ++ A  L   M      PD  I   +I   S  G +   V EI ++ D    
Sbjct: 190 HSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAV-EIAKEADAKHC 248

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T  +  NS++   +    + +   +   M +  P                SP+  +++I+
Sbjct: 249 TSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGP----------------SPDIYTYNIL 292

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
              L + G    A  L   M Q G + +   +N+LI+GL   NR   +  L++EM   G 
Sbjct: 293 FEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGC 352

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P   T   + + L R       + L +++  +   P V     ++  LCK G+  +A R
Sbjct: 353 DPNAITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHR 412

Query: 451 FLTDMVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
               M+      P+ + Y A I GL     ++ A+ L   +    C PDV  Y  I++  
Sbjct: 413 LFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAF 472

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
           CK  R+ EA +L   M   G       +  L+   CK
Sbjct: 473 CKQGRIDEAFELLERMPFAG---DKVMFRTLVRALCK 506



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 191/431 (44%), Gaps = 28/431 (6%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +D+ ++   +S   L   +R L   G V+ A   F + K       +  +Y+ L+ AL
Sbjct: 98  LLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAAL 157

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DE 135
             +   + V   L+EM+  G   DK T + ++   C SG  DKA  +   +I    V D 
Sbjct: 158 TAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDA 217

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
            ++  ++   SK G VD+A E+ +  D  +   +  T+  L+ GF+K  R+ + +++F +
Sbjct: 218 RIYDPVIEELSKTGRVDEAVEIAKEADAKHC-TSVVTYNSLVLGFLKARRLKRGIKVFTR 276

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M ++G + D   Y+++  GL ++     A +L   M   G+ PD    + LI    ++  
Sbjct: 277 MARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNR 336

Query: 256 ----LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
               +TL+ + +    D N +T     +++ L  N   D+   L Q ++  +        
Sbjct: 337 YHRAVTLIQEMVSRGCDPNAITY--TILLKWLARNARADECVELFQRLLDRK-------- 386

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM-QNVFLYNNLIDGLC 370
                   ++PN  +++ +++ L K G+LD A  LF  M    C   N   Y  LI GLC
Sbjct: 387 --------LAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLC 438

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
               LE +  LL  M +    P      ++    C++  +  A  L+ +M   G +   +
Sbjct: 439 LKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAGDKVMFR 498

Query: 431 HNTLLIKELCK 441
               L++ LCK
Sbjct: 499 ---TLVRALCK 506



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 7/350 (2%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +PN  +++ +++ L K G+LD A  LF  M        N   Y  LI GLC    LE + 
Sbjct: 1   APNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAV 60

Query: 380 ELLREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            LL  +  + S   P  + L   F+    R ++   + L++ M   G    ++     ++
Sbjct: 61  LLLDAVYFKLSWLVPATY-LIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLR 119

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
            LCK G    A  F  +      L   +  YS  +  L   KR +   E+ R++ + G  
Sbjct: 120 GLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLE 179

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D   Y++II  LCK+  V +A+ L   MI++  +P    Y+ +I    K+G +D+A+  
Sbjct: 180 ADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEI 239

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
                 K   S  V+TY +L+ G   A R    I ++  M   G +P+  T+  L  GL 
Sbjct: 240 AKEADAKHCTS--VVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLS 297

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    R A      M + G+ PD   F +LI+  + +     A  +++EM
Sbjct: 298 RHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEM 347


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 168/317 (52%), Gaps = 5/317 (1%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC  +V  +  L++GLC   R+ ++  L+  M E G +P    +N     LC+  D
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIING----LCKMGD 56

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              ALNL+ KM     +  V     +I  LCK G  + A    T+M  +G  PD++ YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I       R   A +L RD+      PDVV ++ +I+ L K  +V+EAE+++ +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+  TYN +I+G+CK   ++ A   L  M  K S SPDV+T++TLI+G C A R D+ 
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + ++ EM  +G   N +T+  LI G C+     AA     +M   G+ P+   F +++++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295

Query: 650 FLSELNPPLAFEVLKEM 666
             S+     AF +L+++
Sbjct: 296 LCSKKELRKAFAILEDL 312



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 136/273 (49%), Gaps = 3/273 (1%)

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           ++ L +    V      +  IIN L K G  + AL+L  +M +     +V +YN +ID L
Sbjct: 27  LQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRL 86

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C       +  L  EM + G  P   T + M    CR      A  L+R M  +   P V
Sbjct: 87  CKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDV 146

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              + LI  L K GK  EA     DM++ G  P  + Y++ I G     R++ A  +   
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + +  C PDVV ++ +I+G CKA+RV    ++F EM  +G++ +  TY  LI+G+C+ G+
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266

Query: 550 IDQAMLCLSRMLEKESG-SPDVITYTTLIDGLC 581
           +D A   L+ M+   SG +P+ IT+ +++  LC
Sbjct: 267 LDAAQDLLNVMI--SSGVAPNYITFQSMLASLC 297



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 24/339 (7%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M + G   D  T T L+   C  G+  +AL++ + +++ G      +  ++    K G+ 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG---HQPYGTIINGLCKMGDT 57

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           + A  L+ +M++ +I+ +   +  +I    K      A  LF +M   G   D   Y  +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RD 268
           I   C++ +   A QL  +M    I PD    S LI +   EG+++   +EI+ D   R 
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS-EAEEIYGDMLRRG 176

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +   T+  NS++        ++ A  +L +M                   + SP+  +F 
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMA----------------SKSCSPDVVTFS 220

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +IN   K  ++D  + +F EM + G + N   Y  LI G C    L+ + +LL  M  S
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHE 426
           G  P + T  SM   LC ++++  A  ++  + + +GH 
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHH 319



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 2/210 (0%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
            A  LF ++  +G+  P+  +Y+ ++++ C+S      E  L++M +     D  T + L
Sbjct: 94  HAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +      G+  +A  ++ +++  G     + ++ ++  F K   ++ A  +++ M   + 
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  TF  LI+G+ K  RVD  +++F +M + G  ++   Y  +I G C+   L+ A  
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           L + M  SG+ P++     ++ S   + EL
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKEL 302



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 39/230 (16%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           R+ R      L +D+++ +  ++P  + F  LI  L   G V EA  ++  + R G+  P
Sbjct: 123 RSGRWTDAEQLLRDMIERQ--INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI-FP 179

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN +++  CK   ++  +  L  M       D  T + L+  YC + + D  + +F
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                                         CE+  R     I  N  T+  LIHGF +  
Sbjct: 240 ------------------------------CEMHRR----GIVANTVTYTTLIHGFCQVG 265

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            +D A  L + M  SG A +   +  ++  LC  K+L  A  +  +++ S
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 14/392 (3%)

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L   +W +          NS++ ++V  G  ++A      ++  + +             
Sbjct: 118 LFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSL------------- 164

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
            + PN  +F+++I  + + G +D A+ +FRE+    C  + + Y+ L+ GLC   R++E+
Sbjct: 165 NIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEA 224

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
             LL EM+  G  P     N +   LC++ D+  A  LV  M ++G  P       L+  
Sbjct: 225 VSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284

Query: 439 LCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           LC  GK  +A   L  MV    +P+ V +   I G +   R      +   + A G   +
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
              Y+ +ISGLCK  +  +A +L+ EM+ KG  P+   Y+ LI+G C+ G +D+A   LS
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
            M  K    P+  TY++L+ G   AG    AI++W EM    C  N + +  LI GLCK 
Sbjct: 405 EMKNK-GYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKD 463

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +   AL+ ++ M  +G+K D+  + ++I  F
Sbjct: 464 GKFMEALMVWKQMLSRGIKLDVVAYSSMIHGF 495



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 252/546 (46%), Gaps = 55/546 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S+  L+E+   S     +E  L +M+     + +     + + Y  +   +KA+ +F+ +
Sbjct: 63  SFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRM 122

Query: 128 IDHGWVDEHV--FSILLVAFSKWGEVDKACELIERM---DDCNIRLNEKTFCVLIHGFVK 182
                  + V  F+ +L    + G  ++A E    +      NI  N  TF ++I    +
Sbjct: 123 WGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCR 182

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              VDKA+++F ++     A D   Y  ++ GLCK ++++ A+ L  EM+  G  P+   
Sbjct: 183 LGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVA 242

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI++   +G+L    K                     LV N                
Sbjct: 243 FNVLISALCKKGDLGRAAK---------------------LVDN---------------- 265

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                      M  KG V PN  +++ +++ L   GKL+ A+SL  +M    C+ N   +
Sbjct: 266 -----------MFLKGCV-PNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             LI+G     R  +   +L  +E  G +   +  +S+   LC+      A+ L ++M  
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P     + LI  LC+ GK  EA  FL++M  +G+LP+   YS+ + G  +      
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A+ +++++  + C  + V Y+I+I+GLCK  +  EA  ++ +M+++G+   V  Y+ +I+
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIH 493

Query: 543 GWCKSGNIDQAMLCLSRML-EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           G+C +  ++Q +   ++ML +     PDVITY  L++  CI      AI + N M ++GC
Sbjct: 494 GFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGC 553

Query: 602 APNRIT 607
            P+ IT
Sbjct: 554 DPDFIT 559



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 216/456 (47%), Gaps = 42/456 (9%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH----VFSILLVAFSKWGEVDKACELI 158
           +   +L V    G F++AL  +N ++    ++ H     F++++ A  + G VDKA E+ 
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             +   N   +  T+  L+HG  K+ R+D+A+ L D+M   G   +   ++V+I  LCK 
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDR----DVNT 271
             L  A +L   M   G  P+    + L+     +G+L     L+ ++  ++    DV  
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            TL+   +M+   S+G+        + ++  E     G E +             +  +I
Sbjct: 314 GTLINGFVMQGRASDGT--------RVLVSLEARGHRGNEYV-------------YSSLI 352

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K+GK + A+ L++EM   GC  N  +Y+ LIDGLC   +L+E+   L EM+  G+ 
Sbjct: 353 SGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYL 412

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN----TLLIKELCKHGKAME 447
           P  FT +S+ R      D   A+ + ++M          HN    ++LI  LCK GK ME
Sbjct: 413 PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN----CIHNEVCYSILINGLCKDGKFME 468

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNII 505
           A      M+  G   D+V YS+ I G  +   V+  L+LF  +   G    PDV+ YNI+
Sbjct: 469 ALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNIL 528

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           ++  C  + +  A D+ N M+ +G  P   T ++ +
Sbjct: 529 LNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFL 564



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 156/328 (47%), Gaps = 5/328 (1%)

Query: 343 ALSLFREM-TQIGCMQNVFLYNNLIDGLCNS---NRLEESYELLREMEESGFKPTHFTLN 398
           A+ LF  M  +  C Q V  +N++++ +      NR  E Y  +   +     P   T N
Sbjct: 115 AVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFN 174

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            + + +CR   V  A+ + R++ ++   P     + L+  LCK  +  EA   L +M  E
Sbjct: 175 LVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVE 234

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P++V ++  I  L     +  A +L  ++   GC P+ V YN ++ GLC   ++ +A
Sbjct: 235 GTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKA 294

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             L N+M++   +P+  T+  LING+   G        L   LE      +   Y++LI 
Sbjct: 295 VSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVS-LEARGHRGNEYVYSSLIS 353

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GLC  G+ + A+ LW EM  KGC PN I + ALI GLC+  +   A      MK KG  P
Sbjct: 354 GLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
           + F + +L+  +    +   A  V KEM
Sbjct: 414 NSFTYSSLMRGYFEAGDSHKAILVWKEM 441



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 25/415 (6%)

Query: 21  VVKSRCF-MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC 77
           VV S+   + P AL F  +I+ +  +GLV++A  +F ++     C P+NY+Y+ L+  LC
Sbjct: 158 VVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRN-CAPDNYTYSTLMHGLC 216

Query: 78  KSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEH 136
           K   +D     L EMQ  G   +      L+   C  G   +A  + + +   G V +E 
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ L+      G+++KA  L+ +M       N+ TF  LI+GFV + R     ++   +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G   +  +Y  +I GLCK  +   A++L+ EM G G  P+  + S LI     EG+L
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396

Query: 257 TLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                 + E ++   +  +   +S+MR     G   +A  + + M     I         
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIH-------- 448

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                   N   + I+IN L KDGK   AL ++++M   G   +V  Y+++I G CN+N 
Sbjct: 449 --------NEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANL 500

Query: 375 LEESYELLREMEESG--FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           +E+  +L  +M   G   +P   T N +    C ++ +  A++++  M  QG +P
Sbjct: 501 VEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDP 555


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 221/448 (49%), Gaps = 26/448 (5%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV------FSILLVAFSKWGEVDKACE 156
           +   +L V   +G  D+AL  +N ++  G  D ++      F++++ +  K G VD A E
Sbjct: 145 SFNSVLNVIIQAGFHDRALEFYNHVV--GAKDMNILPNVLSFNLIIKSMCKLGLVDNAIE 202

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           L   M       +  T+C L+ G  K  R+D+A+ L D+M   G     A ++V+I GLC
Sbjct: 203 LFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLC 262

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
           K        +L   M   G  P+    + LI     +G+L   +  +  DR V++   + 
Sbjct: 263 KKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL--DRMVSS-KCVP 319

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N +    + NG + Q          G  +    V +LM  +G +  N   + ++++ L K
Sbjct: 320 NEVTYGTIINGLVKQ----------GRALDGARVLVLMEERGYIV-NEYVYSVLVSGLFK 368

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
           +GK + A+ LF+E    GC  N  LY+ L+DGLC   + +E+ ++L EM + G  P  FT
Sbjct: 369 EGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFT 428

Query: 397 LNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            +S+ +      +   A+ + + M ++   E  V + ++LI  LCK GK MEA      M
Sbjct: 429 FSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCY-SVLIHGLCKDGKVMEAMMVWAKM 487

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD-ICAH-GCCPDVVAYNIIISGLCKAQ 513
           +  G  PD+V YS+ I GL D   V+ AL+L+ + +C      PDV+ YNI+ + LCK  
Sbjct: 488 LATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQS 547

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLI 541
            ++ A DL N M+ +G  P + T N+ +
Sbjct: 548 SISRAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 249/565 (44%), Gaps = 55/565 (9%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           ++ +F    + G     + ++  L+E    S   + +E  L  M+     + + +   + 
Sbjct: 55  SDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMF 114

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERM---DD 163
           + Y  +   +KA+ +F  +    +    V  F+ +L    + G  D+A E    +    D
Sbjct: 115 KAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKD 174

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
            NI  N  +F ++I    K   VD A++LF +M       DA  Y  ++ GLCK  +++ 
Sbjct: 175 MNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDE 234

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           A+ L  EM+  G  P     + LI     +G+ T + K                     L
Sbjct: 235 AVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTK---------------------L 273

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           V N                           M  KG V PN  +++ +I+ L   GKLD A
Sbjct: 274 VDN---------------------------MFLKGCV-PNEVTYNTLIHGLCLKGKLDKA 305

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           LSL   M    C+ N   Y  +I+GL    R  +   +L  MEE G+    +  + +   
Sbjct: 306 LSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSG 365

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           L +      A+ L ++   +G +      + L+  LC+  K  EA + L++M  +G  P+
Sbjct: 366 LFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPN 425

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              +S+ + G  ++     A+E+++D+    C  + V Y+++I GLCK  +V EA  ++ 
Sbjct: 426 AFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWA 485

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCI 582
           +M+  G  P V  Y+ +I G C +G++++A+   + ML  E  S PDVITY  L + LC 
Sbjct: 486 KMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCK 545

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRIT 607
                 A+ L N M ++GC P+ +T
Sbjct: 546 QSSISRAVDLLNSMLDRGCDPDLVT 570



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 192/391 (49%), Gaps = 16/391 (4%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           NS++ +++  G  D+A      ++  + +              + PN  SF++II ++ K
Sbjct: 147 NSVLNVIIQAGFHDRALEFYNHVVGAKDM-------------NILPNVLSFNLIIKSMCK 193

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +D A+ LFREM    C+ + + Y  L+DGLC  +R++E+  LL EM+  G  P+  T
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            N +   LC++ D      LV  M ++G  P  V +NT LI  LC  GK  +A   L  M
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNT-LIHGLCLKGKLDKALSLLDRM 312

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           V    +P+ V Y   I GL+   R      +   +   G   +   Y++++SGL K  + 
Sbjct: 313 VSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKS 372

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA  LF E + KG   +   Y+ L++G C+    D+AM  LS M +K   +P+  T+++
Sbjct: 373 EEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK-GCAPNAFTFSS 431

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           L+ G    G    AI +W +M +  CA N + +  LI GLCK  +   A++ +  M   G
Sbjct: 432 LMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATG 491

Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +PD+  + ++I       +   A ++  EM
Sbjct: 492 CRPDVVAYSSMIQGLCDAGSVEEALKLYNEM 522



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 190/441 (43%), Gaps = 41/441 (9%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A  +  L+  L  V  ++EA  L D+++ EG C P+  ++N L+  LCK      V  
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG-CFPSPATFNVLINGLCKKGDFTRVTK 272

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFS 146
            +  M   G   ++ T   L+   C  G+ DKALS+ + ++    V +E  +  ++    
Sbjct: 273 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLV 332

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G       ++  M++    +NE  + VL+ G  K+ + ++A++LF +    G   +  
Sbjct: 333 KQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTV 392

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y  ++ GLC++++ + A+++ SEM   G  P+    S L+    + G     + E+W  
Sbjct: 393 LYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAI-EVW-- 449

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
           +D+  +    N +   ++ +G       +++AM+    +   G            P+  +
Sbjct: 450 KDMTKINCAENEVCYSVLIHGLCKDG-KVMEAMMVWAKMLATGCR----------PDVVA 498

Query: 327 FDIIINTLLKDGKLDLALSLFREMT--QIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           +  +I  L   G ++ AL L+ EM   +     +V  YN L + LC  + +  + +LL  
Sbjct: 499 YSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNS 558

Query: 385 MEESGFKPTHFTLNSMFRC---------------------LCRRQDVVGALNLVRKMRVQ 423
           M + G  P   T N   R                      L +RQ  +GA  +V  M  +
Sbjct: 559 MLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQK 618

Query: 424 GHEPWVKHNTLLIKELCKHGK 444
              P       ++ ELC+  K
Sbjct: 619 FLSPKASTWARVVHELCQPKK 639


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 168/317 (52%), Gaps = 5/317 (1%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + GC  +V  +  L++GLC   R+ ++  L+  M E G +P    +N     LC+  D
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIING----LCKMGD 56

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
              ALNL+ KM     +  V     +I  LCK G  + A    T+M  +G  PD++ YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I       R   A +L RD+      PDVV ++ +I+ L K  +V+EAE+++ +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+  TYN +I+G+CK   ++ A   L  M  K S SPDV+T++TLI+G C A R D+ 
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
           + ++ EM  +G   N +T+  LI G C+     AA     +M   G+ P+   F +++++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295

Query: 650 FLSELNPPLAFEVLKEM 666
             S+     AF +L+++
Sbjct: 296 LCSKKELRKAFAILEDL 312



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 153/304 (50%), Gaps = 5/304 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +F  ++N L  +G++  AL+L   M + G       Y  +I+GLC     E +  L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L +MEE+  K      N++   LC+    + A NL  +M  +G  P V   + +I   C+
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  +A + L DM++    PD+V +SA I  L+   +V  A E++ D+   G  P  + 
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I G CK  R+ +A+ + + M +K   P V T++ LING+CK+  +D  M     M 
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM- 242

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            +     + +TYTTLI G C  G  D A  L N M   G APN ITF +++  LC     
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302

Query: 622 RAAL 625
           R A 
Sbjct: 303 RKAF 306



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 3/295 (1%)

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           ++ L +    V      +  IIN L K G  + AL+L  +M +     +V +YN +ID L
Sbjct: 27  LQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRL 86

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C       +  L  EM + G  P   T + M    CR      A  L+R M  +   P V
Sbjct: 87  CKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDV 146

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
              + LI  L K GK  EA     DM++ G  P  + Y++ I G     R++ A  +   
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + +  C PDVV ++ +I+G CKA+RV    ++F EM  +G++ +  TY  LI+G+C+ G+
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266

Query: 550 IDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           +D A   L+ M+   SG +P+ IT+ +++  LC       A  +  ++++    P
Sbjct: 267 LDAAQDLLNVMI--SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCP 319



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 153/393 (38%), Gaps = 88/393 (22%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF  L++G   + RV +AL L D+M + G       Y  II GLCK    E AL L S+M
Sbjct: 12  TFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKM 67

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
                                            E+  +    ++ N+I+  L  +G    
Sbjct: 68  ---------------------------------EETHIKAHVVIYNAIIDRLCKDGHHIH 94

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A NL   M       D G+           P+  ++  +I++  + G+   A  L R+M 
Sbjct: 95  AQNLFTEM------HDKGI----------FPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
           +     +V  ++ LI+ L    ++ E+ E+  +M   G  PT  T NSM           
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM----------- 187

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
                                   I   CK  +  +A R L  M  +   PD+V +S  I
Sbjct: 188 ------------------------IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            G    KRVD  +E+F ++   G   + V Y  +I G C+   +  A+DL N MI+ G+ 
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           P+  T+  ++   C    + +A   L  + + E
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 23/333 (6%)

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
           M + G   D  T T L+   C  G+  +AL++ + +++ G      +  ++    K G+ 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG---HQPYGTIINGLCKMGDT 57

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           + A  L+ +M++ +I+ +   +  +I    K      A  LF +M   G   D   Y  +
Sbjct: 58  ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RD 268
           I   C++ +   A QL  +M    I PD    S LI +   EG+++   +EI+ D   R 
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS-EAEEIYGDMLRRG 176

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +   T+  NS++        ++ A  +L +M                   + SP+  +F 
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMA----------------SKSCSPDVVTFS 220

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +IN   K  ++D  + +F EM + G + N   Y  LI G C    L+ + +LL  M  S
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           G  P + T  SM   LC ++++  A  ++  ++
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 24/332 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ L+      G V +A  L++RM    +    + +  +I+G  K    + AL L  KM
Sbjct: 12  TFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNLLSKM 67

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            ++   +   +Y+ II  LCK+     A  L++EM   GI PD    S +I S    G  
Sbjct: 68  EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127

Query: 257 T---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           T    L++++ E R +N   +  ++++  LV  G + +A  +   M++            
Sbjct: 128 TDAEQLLRDMIE-RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR------------ 174

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G + P T +++ +I+   K  +L+ A  +   M    C  +V  ++ LI+G C + 
Sbjct: 175 ---RG-IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           R++   E+  EM   G      T  ++    C+  D+  A +L+  M   G  P      
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            ++  LC   +  +AF  L D+ +    P IV
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 2/210 (0%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
            A  LF ++  +G+  P+  +Y+ ++++ C+S      E  L++M +     D  T + L
Sbjct: 94  HAQNLFTEMHDKGI-FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
           +      G+  +A  ++ +++  G     + ++ ++  F K   ++ A  +++ M   + 
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  TF  LI+G+ K  RVD  +++F +M + G  ++   Y  +I G C+   L+ A  
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           L + M  SG+ P++     ++ S   + EL
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKEL 302



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 39/234 (16%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           R+ R      L +D+++ +  ++P  + F  LI  L   G V EA  ++  + R G+  P
Sbjct: 123 RSGRWTDAEQLLRDMIERQ--INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI-FP 179

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN +++  CK   ++  +  L  M       D  T + L+  YC + + D  + +F
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239

Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
                                         CE+  R     I  N  T+  LIHGF +  
Sbjct: 240 ------------------------------CEMHRR----GIVANTVTYTTLIHGFCQVG 265

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
            +D A  L + M  SG A +   +  ++  LC  K+L  A  +  +++ S + P
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCP 319


>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
 gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
          Length = 448

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 221/448 (49%), Gaps = 23/448 (5%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE-- 253
           M + G   D   Y++++ GL K   ++ A  + S M G G  PD      L+    +   
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 254 -GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            GE+  L +E+ E   V    L  N+I++ L+ +G  D  +            +D+ V  
Sbjct: 61  VGEVCELFQEL-ESNGVAVGMLAYNAILKALMCSGDFDGGFKF----------SDIAVG- 108

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                G++ P+  ++  +++ L+K GK   A  +  EM +   + +   Y  LI  LC  
Sbjct: 109 ----DGSL-PHVLAYKTMLDCLIKTGKTREASEVVGEMIK-KSVPDGMTYTALISVLCKH 162

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           NR +++ ++   M E    P      S+    CR + + GA  L  +M  +G+ P     
Sbjct: 163 NRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTY 222

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC- 491
            LL++ LC  G++  A+   + M   G +PD   Y++ I G     R+  A  LF+++  
Sbjct: 223 GLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE 282

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
                 D   YN++I GLC+A +V EA ++   M+ KG IP++ TYN LI G+ K+  +D
Sbjct: 283 GEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVD 342

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L L R++E++  SP+ + Y+T IDGLC  G+ ++A   + +  E+GC P+ +T+ AL
Sbjct: 343 KA-LQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNAL 401

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           I GL   +R   A   +R M E+G   D
Sbjct: 402 IRGLFGANRMDEAHRLYREMGERGYIAD 429



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 163/366 (44%), Gaps = 36/366 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+  S+++++  L K   +D A ++   M   G   +V     L+D  C   R+ E  
Sbjct: 6   VVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVC 65

Query: 380 ELLREME------------------------ESGFK-----------PTHFTLNSMFRCL 404
           EL +E+E                        + GFK           P      +M  CL
Sbjct: 66  ELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCL 125

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +      A  +V +M ++   P     T LI  LCKH +A +A +    MV++  +P++
Sbjct: 126 IKTGKTREASEVVGEM-IKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNL 184

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y++ +      +++D A  LF ++   G  P    Y +++  LC   R   A D+ + 
Sbjct: 185 DVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSS 244

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M ++G +P   TY  LI G C +G I +A +    +LE E    D   Y  LI+GLC A 
Sbjct: 245 MRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRAS 304

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + ++A+ +   M +KGC P   T+ ALI G  K +    AL  FR+M+EKG  P+  ++ 
Sbjct: 305 KVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYS 364

Query: 645 ALISAF 650
             I   
Sbjct: 365 TFIDGL 370



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 184/435 (42%), Gaps = 59/435 (13%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  ++ +L+ G  K S VD+A  +   M   G+  D     +++   C+ K++    +L+
Sbjct: 9   DRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELF 68

Query: 229 SEMKGSGITPDFEILSKLITS--CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            E++ +G+       + ++ +  CS + +      +I          L   +++  L+  
Sbjct: 69  QELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKT 128

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G   +A  ++  MIK                    P+  ++  +I+ L K  + D A+ +
Sbjct: 129 GKTREASEVVGEMIK-----------------KSVPDGMTYTALISVLCKHNRADDAMKV 171

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M +   + N+ +Y +L+   C + +L+ +Y L  EM + G+ P+  T   + RCLC 
Sbjct: 172 FDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCN 231

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNT--------------------------------- 433
                 A ++   MR +GH P    NT                                 
Sbjct: 232 GGRSYLAYDIHSSMRSRGHVP--DENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLD 289

Query: 434 -----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                +LI+ LC+  K  EA      MV +G +P +  Y+A I G      VD AL+LFR
Sbjct: 290 AGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFR 349

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G  P+ + Y+  I GLCK  ++ EA + F + + +G +P   TYN LI G   + 
Sbjct: 350 VMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGAN 409

Query: 549 NIDQAMLCLSRMLEK 563
            +D+A      M E+
Sbjct: 410 RMDEAHRLYREMGER 424



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 196/442 (44%), Gaps = 25/442 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  SYN L+  L K  SVD     L  M   G+  D  T   L+  +C   +  +   
Sbjct: 7   VPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCE 66

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F E+  +G  V    ++ +L A    G+ D   +  +         +   +  ++   +
Sbjct: 67  LFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLI 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +  +A ++  +M K     D   Y  +I  LCK+ + + A++++  M    I P+ +
Sbjct: 127 KTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLD 185

Query: 242 ILSKLITS-CSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + + L+ + C     +G   L V+ I      +  T     ++R L + G    AY++  
Sbjct: 186 VYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTY--GLLLRCLCNGGRSYLAYDIHS 243

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCM 356
           +M                 +G V P+ +++  +I      G++  A  LF+E+ +    +
Sbjct: 244 SMRS---------------RGHV-PDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAL 287

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +  +YN LI+GLC ++++EE+ E+   M + G  PT  T N++     +  +V  AL L
Sbjct: 288 LDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQL 347

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            R M  +G  P     +  I  LCK GK  EA  F    V+ G +PD V Y+A I GL  
Sbjct: 348 FRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFG 407

Query: 477 IKRVDLALELFRDICAHGCCPD 498
             R+D A  L+R++   G   D
Sbjct: 408 ANRMDEAHRLYREMGERGYIAD 429



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 36/201 (17%)

Query: 8   ARRIAPLRVLAQDVVKS-RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           A RI   +VL ++V++  +  +  G    LI  L     VEEA  +   +  +G C+P  
Sbjct: 267 AGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKG-CIPTL 325

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +YN L+    K+  VD      + M++ G+  +    +  +   C  G+ ++A   F +
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            ++ G V ++V                                  T+  LI G    +R+
Sbjct: 386 SVERGCVPDNV----------------------------------TYNALIRGLFGANRM 411

Query: 187 DKALQLFDKMTKSGFASDAAM 207
           D+A +L+ +M + G+ +D ++
Sbjct: 412 DEAHRLYREMGERGYIADRSL 432


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 246/571 (43%), Gaps = 33/571 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +YN L+ A CK   +      L  M++ G   D +T   L+   C +G    A  +
Sbjct: 88  PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147

Query: 124 FNEIIDHGW---VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           F ++    W    D + ++IL+      G +D AC +  +M     R    T+ VL+ G 
Sbjct: 148 FVQM-PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGL 206

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K  RV +A  L  +M   G   +   Y+ +IGGLC+  + +   +L  +M+    +PD 
Sbjct: 207 CKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDC 266

Query: 241 EILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
              ++++      G++    K + E   + V    L  N+++      G +  A ++LQ 
Sbjct: 267 WTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQL 326

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M +                  V+P   +F+ +I+     GK+  A++   +M   G   N
Sbjct: 327 MKRNR----------------VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPN 370

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              +N+LI G C+    + +  LL  MEE G  P   T       LC    +  A +L  
Sbjct: 371 TVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFS 430

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
            + ++G +      T L+   C+ G    AF  +  M  E  +PD+  Y+  I GL  +K
Sbjct: 431 CLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVK 490

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+D A++L   +   G  P    +NI+I  +   ++ A+A  ++ +MI+ G  P   TY 
Sbjct: 491 RLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550

Query: 539 LLIN-----GWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIML 592
           L I+     G  K  NID A++ +      E+G  PDV TY  +I     AG  + A   
Sbjct: 551 LKISTDWFEGATKEENIDMAVVEM-----HEAGVFPDVETYNAIIKAYVDAGLKEKAFFA 605

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
             +M      P+  T+  L+  +C  D   A
Sbjct: 606 HVKMLSVPIDPDCTTYSILLNYMCNKDDSDA 636



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 264/602 (43%), Gaps = 47/602 (7%)

Query: 58  REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGYDKYTLTPLLQVYCNSGQ 116
           RE    P+ ++YNCL+  LC++  +        +M + +G  YD+Y+ T L++  C +G+
Sbjct: 117 REAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGR 176

Query: 117 FDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
            D A  VF + +  GW     H +++LL    K   V +A  L+  M +  +  N  T+ 
Sbjct: 177 IDDACRVFAK-MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235

Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
            LI G  ++ R D   +L +KM     + D   Y  ++ GLCK+ ++    ++  E  G 
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295

Query: 235 GITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G+  +    + LI      G++   L V ++ +   VN      N ++      G + +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
              L  M      A  G          +SPNT +F+ +I+     G+  +AL L   M +
Sbjct: 356 MAFLTQM------AGAG----------LSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + +   Y   ID LC+  +LEE++ L   +   G K  +    S+    C+  D+  
Sbjct: 400 YGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDS 459

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A  L+ KM  +   P V     LI  LCK  +   A   L  M ++G  P    ++  I 
Sbjct: 460 AFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS-----GLCKAQRVAEAEDLFNEMIT 527
            ++  K+   A +++  + + GC PD   Y + IS     G  K + +  A     EM  
Sbjct: 520 QMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHE 576

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G+ P V TYN +I  +  +G  ++A     +ML      PD  TY+ L++ +C     D
Sbjct: 577 AGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPI-DPDCTTYSILLNYMCNKDDSD 635

Query: 588 --DAIMLWN------------EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             D   +W             +M E   AP   T+ AL+ GL  C++ R   V + ++K 
Sbjct: 636 AFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGL--CNQCRLEEVEWLLLKM 693

Query: 634 KG 635
           +G
Sbjct: 694 QG 695



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 220/516 (42%), Gaps = 33/516 (6%)

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           R+D  ++R +            +  R+   L  F  M KSG   +   Y+ +I   CK  
Sbjct: 45  RLDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLA 104

Query: 220 QLEMALQLYSEMKGSGITPD-----------------------FEILSKLITSCSDEGEL 256
            L  A      M+ +G+ PD                       F  + +   +C D    
Sbjct: 105 LLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSY 164

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK----GEPIADVGVEM 312
           T+L+K +     ++    +   + R     G +     LL  + K    GE  A +G   
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPG-VHTYTVLLDGLCKVRRVGEAEALLGE-- 221

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
            M+ KG V PN  +++ +I  L ++G+ D    L  +M       + + Y  ++ GLC  
Sbjct: 222 -MVNKGVV-PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKH 279

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            ++    ++L E    G      T N++    C+  D+  AL++++ M+     P V+  
Sbjct: 280 GKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTF 339

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             +I   C  GK  +A  FLT M   G  P+ V +++ I G   +    +AL L   +  
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
           +G  PD   Y I I  LC   ++ EA  LF+ +  KG+      Y  L++G+C+ G+ID 
Sbjct: 400 YGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDS 459

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           A   + +M   E+  PDV TY TLIDGLC   R D AI L ++M+++G  P   TF  LI
Sbjct: 460 AFGLMEKM-ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
             +    +   A   +  M   G KPD   +   IS
Sbjct: 519 KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKIS 554



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 2/340 (0%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           + K    PN  +++ +IN   K   L  A +    M + G   + F YN L+ GLC +  
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 375 LEESYELLREMEES-GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           L  +  L  +M    G     ++   + + LC    +  A  +  KM      P V   T
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+  LCK  +  EA   L +MV +G +P++V Y+A IGGL    R D   +L   +   
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
              PD   Y  ++ GLCK  +V     + +E I KG+   V TYN LING+CK G++  A
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +  L +++++   +P V T+  +I G C  G+   A+    +M   G +PN +TF +LI+
Sbjct: 321 LDVL-QLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS 379

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           G C     + AL    +M+E G+ PD   +   I A   E
Sbjct: 380 GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDE 419



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 154/672 (22%), Positives = 282/672 (41%), Gaps = 57/672 (8%)

Query: 15  RVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCL 72
           RV A+    SR +  PG   +  L+  L  V  V EA  L  ++  +G+ VPN  +YN L
Sbjct: 182 RVFAK---MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV-VPNVVTYNAL 237

Query: 73  LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
           +  LC+    D V   L++M+      D +T T ++   C  G+      V +E I  G 
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297

Query: 133 VDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ 191
             E + ++ L+  + K G++  A ++++ M    +    +TF  +IHGF    +V KA+ 
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
              +M  +G + +   ++ +I G C   + ++AL+L   M+  G+ PD +  +  I +  
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417

Query: 252 DEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           DEG+L     +      + +    ++  S++      G ID A+ L++ M     +    
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCM---- 473

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                       P+  +++ +I+ L K  +LD A+ L  +M + G       +N LI  +
Sbjct: 474 ------------PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTL-----NSMFRCLCRRQDVVGALNLVRKMRVQG 424
               +  ++ ++  +M  SG KP   T         F    + +++  A   V +M   G
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAG 578

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS---------------- 468
             P V+    +IK     G   +AF     M+     PD   YS                
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638

Query: 469 -AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
              I  ++D++ +    ELF  +C     P +  Y  ++ GLC   R+ E E L  +M  
Sbjct: 639 NEKIWKMVDVRNLQ---ELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQG 695

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLS-RMLEKESGSPDVITYTTLIDGLCIAGRP 586
             ++      + L+  +C      +A  C   R +  +S  P + +   L+ GLC +G  
Sbjct: 696 NSILLDEDMSDYLLGCYCNLEMYREA--CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDH 753

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             A+ ++++M   G   + + +  LI  L +     A L    +M  K        + +L
Sbjct: 754 GMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASL 813

Query: 647 ISAFLSELNPPL 658
           +   ++ELN  L
Sbjct: 814 VR-LVAELNEDL 824



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 81/175 (46%)

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R+   L  F  +   G  P+   YN +I+  CK   +A+A      M   GL P   TYN
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            L+ G C++G +  A     +M  +     D  +YT LI GLC AGR DDA  ++ +M  
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             C P   T+  L+ GLCK  R   A      M  KG+ P++  + ALI     E
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQE 244


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 223/483 (46%), Gaps = 49/483 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ ++V++S+ G++  A +++  M    +  N       IH  V  ++++KAL+  ++M 
Sbjct: 174 FAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQ 233

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             G   +   Y+ +I G C   Q+E A++L +EM   G  PD                  
Sbjct: 234 LVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPD------------------ 275

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                      V+  T     +M  L  +  I +  NL++ M+K   +            
Sbjct: 276 ----------KVSYYT-----VMGFLCQDKRIKEVRNLMEKMVKDNKLF----------- 309

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  +++ +++ L K G  D AL   RE  + G   +   Y+ +++  C   R++ 
Sbjct: 310 ----PDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDR 365

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + E++ EM   G  P   T  ++   LC+   V  A  ++++M   G +P     T L+ 
Sbjct: 366 AKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLN 425

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC+HG ++EA   +    ++ + P+ + YS  + GL    ++  A ++ R++   G  P
Sbjct: 426 GLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP 485

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
             V  N++I  LC  Q++ EA+    E + +G   +   +  +I+G+C+S NID A+  L
Sbjct: 486 TPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLL 545

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M    +  PD +T+T +ID L   GR ++A +   +M +KG  P  +T+ A+I   CK
Sbjct: 546 DDMY-LNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCK 604

Query: 618 CDR 620
             R
Sbjct: 605 MGR 607



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 240/534 (44%), Gaps = 38/534 (7%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL-------FDKMTKSG--- 200
           V + C LIER    N +L E     L+   +K  +V   LQL        D    +G   
Sbjct: 73  VREVCRLIERRSAWNAKL-EGDLRRLLRS-LKPRQVCAVLQLQSDERIALDFFYWAGRQW 130

Query: 201 -FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--T 257
            +  D  +Y +++  L K K  + A ++   M   GI    E  + ++ S S  G+L   
Sbjct: 131 RYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNA 190

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM---------------IKG 302
           + V  + +   V    L+CN+ + +LV    +++A   L+ M               IKG
Sbjct: 191 MQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKG 250

Query: 303 E---PIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM- 356
                  +  +E++  M FKG   P+  S+  ++  L +D ++    +L  +M +   + 
Sbjct: 251 YCDLYQVEHAMELIAEMPFKG-CPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLF 309

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +   YN L+  L      +E+ E LRE EE GF+      +++    C +  +  A  +
Sbjct: 310 PDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEI 369

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           V +M  +G  P V   T ++  LCK GK  EA + L  M + G  P+ V Y+A + GL  
Sbjct: 370 VNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQ 429

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
                 A E+          P+ + Y++++ GL +  +++EA D+  EM+TKG  P+   
Sbjct: 430 HGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVE 489

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            NLLI   C    +++A   +   L +   + + + +TT+I G C +   D A+ L ++M
Sbjct: 490 INLLIKSLCLEQKMNEAKKFMEECLNR-GCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM 548

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
                 P+ +TF A+I  L K  R   A V+   M +KG+ P    + A+I  +
Sbjct: 549 YLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQY 602



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ ++  M+  G EP +      I  L    K  +A RFL  M   G  P++V Y+  I 
Sbjct: 190 AMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIK 249

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LI 531
           G  D+ +V+ A+EL  ++   GC PD V+Y  ++  LC+ +R+ E  +L  +M+    L 
Sbjct: 250 GYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLF 309

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   TYN L++   K G+ D+A+  L R  E+     D + Y+ +++  C+ GR D A  
Sbjct: 310 PDQVTYNTLVHMLSKHGHADEALEFL-RETEERGFQVDKVGYSAIVNSFCMQGRMDRAKE 368

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           + NEM  KGC+P+ +T+ A++ GLCK  +   A    + M + G KP+   + AL++   
Sbjct: 369 IVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLC 428

Query: 652 SELNPPLAFEVL 663
              N   A E++
Sbjct: 429 QHGNSLEAREMM 440



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + +L  + ++L  M+++G +P     N+    L     +  AL  + +M++ G  P V  
Sbjct: 184 AGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVT 243

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              LIK  C   +   A   + +M  +G  PD V Y   +G L   KR+     L   + 
Sbjct: 244 YNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMV 303

Query: 492 A-HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             +   PD V YN ++  L K     EA +   E   +G       Y+ ++N +C  G +
Sbjct: 304 KDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRM 363

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D+A   ++ M+ K   SPDV+TYT +++GLC  G+ ++A  +  +M + GC PN +++ A
Sbjct: 364 DRAKEIVNEMITK-GCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L+ GLC+      A       +E    P+   +  ++     E     A +V++EM
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREM 478



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/563 (20%), Positives = 229/563 (40%), Gaps = 67/563 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E+A    ++++  G+  PN  +YNCL++  C    V+     + EM   G   DK +  
Sbjct: 222 LEKALRFLERMQLVGI-TPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYY 280

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG--WVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
            ++   C   +  +  ++  +++     + D+  ++ L+   SK G  D+A E +   ++
Sbjct: 281 TVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEE 340

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
              ++++  +  +++ F  + R+D+A ++ ++M   G + D   Y  ++ GLCK  ++E 
Sbjct: 341 RGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEE 400

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNTMTLLCN 277
           A ++  +M   G  P+    + L+      G      E+    +E W   +  T +++ +
Sbjct: 401 AKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMH 460

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
            + R     G + +A              DV  EML   KG   P     +++I +L  +
Sbjct: 461 GLRR----EGKLSEA-------------CDVVREMLT--KGFF-PTPVEINLLIKSLCLE 500

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            K++ A     E    GC  N   +  +I G C S+ ++ +  LL +M  +   P   T 
Sbjct: 501 QKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTF 560

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
                                              T +I  L K G+  EA  +   M++
Sbjct: 561 -----------------------------------TAIIDALGKKGRIEEATVYTMKMLK 585

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  P  V Y A I     + RV+  ++L   + +   C    AYN +I  LC       
Sbjct: 586 KGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCR--TAYNQVIEKLCNFGNPEA 643

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A+ +   ++         T ++L+  +   G    A     RM ++ +  PD+     L 
Sbjct: 644 ADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDR-NLIPDLKLCEKLS 702

Query: 578 DGLCIAGRPDDAIMLWNEMEEKG 600
             L + G+ ++A  L  +  ++G
Sbjct: 703 KKLVLEGKLEEADNLMLQFVQRG 725


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 203/438 (46%), Gaps = 25/438 (5%)

Query: 130 HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           H  +D  +++ L+    K  +   A EL+  M       +  T+  LI G  K   +D A
Sbjct: 5   HFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAA 64

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             L  KM  +G A +   Y  +I GLCK ++   A+Q    M  SG  PD    + LI  
Sbjct: 65  QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 124

Query: 250 CS-----DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                  D+  L L    I   R  + +T   N+ +  L   G +D+   +L+ M     
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIPDVVTY--NTFISGLCKAGKLDKGLEMLEEM----- 177

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
                       +G +SP+  +F  II+ L K  ++D A  +F+ M + GC+ +   Y+ 
Sbjct: 178 -----------DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSI 226

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           ++D L  +NRL+   E+L  M +SG      T   +   L R  D+  A     +    G
Sbjct: 227 MLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAG 286

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
               V  +   I  LC+ GK   A   L  M++ G LP+++ Y+  I GL     VD A 
Sbjct: 287 CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAW 346

Query: 485 ELFRDICAHGCC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL-IPSVATYNLLIN 542
           +L R +   GCC PDV+ +N +ISG CKA R+++A+ L  EM  K + +P V TYN +I+
Sbjct: 347 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMID 406

Query: 543 GWCKSGNIDQAMLCLSRM 560
           G  K G++ QA L L  M
Sbjct: 407 GQSKFGSLKQAKLLLEEM 424



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 171/360 (47%), Gaps = 39/360 (10%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I+ L K G LD A +L ++M   GC  NV  Y  LIDGLC + R  ++ + ++ M
Sbjct: 47  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 106

Query: 386 EESGFKPTHFTLNSMFRCLC--RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
             SG +P   T NS+   LC   R D  G L L   M   G  P V      I  LCK G
Sbjct: 107 LRSGCEPDLVTYNSLIHGLCMANRMDDAG-LVLQELMIESGRIPDVVTYNTFISGLCKAG 165

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +    L +M + G  PD+V + + I GL    R+D A ++F+ +   GC PD + Y+
Sbjct: 166 KLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYS 225

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           I++  L +A R+   E++   M+  G     ATY  LI+   ++G+I+ A     + +E 
Sbjct: 226 IMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEA 285

Query: 564 ---------------------------------ESGS-PDVITYTTLIDGLCIAGRPDDA 589
                                            ESGS P++++Y  +IDGLC +G  DDA
Sbjct: 286 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 345

Query: 590 IMLWNEMEEKGC-APNRITFMALITGLCKCDRPRAALVHFRMMKEKGM-KPDMFVFVALI 647
             L  +M + GC  P+ I F  LI+G CK  R   A    + MK K +  PD+  +  +I
Sbjct: 346 WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 206/477 (43%), Gaps = 86/477 (18%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           M    F  DAA+Y+ +I GLCK ++   AL+L   M  +G                    
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGY------------------- 41

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
                     D  V T T L +     L  +G +D A  LLQ M      AD G      
Sbjct: 42  ----------DASVVTYTTLIDG----LCKSGDLDAAQALLQKM------ADAGC----- 76

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                +PN  ++  +I+ L K  +   A+   + M + GC  ++  YN+LI GLC +NR+
Sbjct: 77  -----APNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131

Query: 376 EESYELLRE-MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +++  +L+E M ESG  P   T N+    LC+   +   L ++ +M   G  P V     
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +I  LCK  +  +AF+    M++ G +PD + YS  +  L    R+D   E+   +   G
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 495 -----------------------------------CCPDVVAYNIIISGLCKAQRVAEAE 519
                                              C  +V  +N  I  LC++ +   A+
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           ++   MI  G +P++ +YN +I+G CKSGN+D A     +ML+     PDVI + TLI G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 580 LCIAGRPDDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
            C AGR   A  L  EM+ K  C P+ +T+  +I G  K    + A +    M+  G
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 121/236 (51%), Gaps = 1/236 (0%)

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           +NTL I  LCK  K   A   L  M   G+   +V Y+  I GL     +D A  L + +
Sbjct: 13  YNTL-IAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              GC P+VV Y  +I GLCKA+R  +A      M+  G  P + TYN LI+G C +  +
Sbjct: 72  ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           D A L L  ++ +    PDV+TY T I GLC AG+ D  + +  EM+  G +P+ +TF +
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +I+GLCK +R   A   F+ M E+G  PD   +  ++             EVL+ M
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 2/307 (0%)

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           +YN LI GLC + +   + ELL  M  +G+  +  T  ++   LC+  D+  A  L++KM
Sbjct: 12  IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
              G  P V   T LI  LCK  +  +A + +  M++ G  PD+V Y++ I GL    R+
Sbjct: 72  ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131

Query: 481 DLALELFRDI-CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           D A  + +++    G  PDVV YN  ISGLCKA ++ +  ++  EM   G+ P V T+  
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I+G CK+  ID A      MLE+    PD +TY+ ++D L  A R D    +   M + 
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGC-VPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G      T+  LI  L +     +A   +    E G   +++   A I A       PLA
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLA 310

Query: 660 FEVLKEM 666
             +L  M
Sbjct: 311 KNILLGM 317



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 166/372 (44%), Gaps = 23/372 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G ++ A  L  ++   G C PN  +Y  L++ LCK+         +K M   
Sbjct: 51  LIDGLCKSGDLDAAQALLQKMADAG-CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRS 109

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHV-FSILLVAFSKWGEVDK 153
           G   D  T   L+   C + + D A  V  E+ I+ G + + V ++  +    K G++DK
Sbjct: 110 GCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDK 169

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
             E++E MD   I  +  TFC +I G  K +R+D A Q+F  M + G   D+  Y +++ 
Sbjct: 170 GLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLD 229

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM- 272
            L +  +L+   ++   M  SG        + LI +    G++        +  +   + 
Sbjct: 230 NLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVM 289

Query: 273 -TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
                N+ +  L  +G    A N+L  MI+   +                PN  S++ +I
Sbjct: 290 EVYTHNAFIGALCRSGKFPLAKNILLGMIESGSL----------------PNLLSYNFVI 333

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           + L K G +D A  L R+M   GC + +V  +N LI G C + RL ++ +LL+EM+    
Sbjct: 334 DGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNI 393

Query: 391 -KPTHFTLNSMF 401
             P   T N+M 
Sbjct: 394 CVPDVVTYNTMI 405



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 159/387 (41%), Gaps = 50/387 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +ARR        + +++S C         LI  L     +++A ++  ++  E   +P
Sbjct: 90  LCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIP 149

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           +  +YN  +  LCK+  +D     L+EM   G   D  T   ++   C + + D A  VF
Sbjct: 150 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVF 209

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             +++ G V D   +SI+L   S+   +D   E++E M          T+  LIH  ++ 
Sbjct: 210 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRA 269

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             ++ A   +++  ++G   +   ++  IG LC++ +  +A  +   M  SG  P+    
Sbjct: 270 GDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNL--- 326

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                         L  N ++  L  +G++D A+ L + M+   
Sbjct: 327 ------------------------------LSYNFVIDGLCKSGNVDDAWKLSRKMLD-- 354

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLY 362
                         G   P+   F+ +I+   K G+L  A  L +EM     C+ +V  Y
Sbjct: 355 -------------SGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401

Query: 363 NNLIDGLCNSNRLEESYELLREMEESG 389
           N +IDG      L+++  LL EM+  G
Sbjct: 402 NTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 46/98 (46%)

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D   Y TLI GLC A +P  A+ L + M   G   + +T+  LI GLCK     AA    
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + M + G  P++  + ALI        P  A + +K M
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 106


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/557 (24%), Positives = 272/557 (48%), Gaps = 22/557 (3%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L   +VK     SP  + +  +I  L   G V +A  LF ++ ++G+ VP+  +Y  +++
Sbjct: 212 LLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGV-VPDVVTYTSIID 270

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
           ALCK+ ++D  E+ L++M   G+  +K T   ++  Y  SGQ+ +   +F E+   G + 
Sbjct: 271 ALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMP 330

Query: 135 EHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             V  +  + +  K G+  +A E  + M     + N  T+ VL+HG+  +      L LF
Sbjct: 331 NIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLF 390

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + M  +G  +D  +++++I    K   ++  + ++++M+  G+ PD      +I + S  
Sbjct: 391 NSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRM 450

Query: 254 GELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           G L   + +  +     +    ++ +S+++    +G++ +A  L+  M+           
Sbjct: 451 GRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS---------- 500

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                +G   PN   F+ IIN+L K+G++  A  +F  +  IG   +V  +N+LIDG   
Sbjct: 501 -----RGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGL 555

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             ++E+++ +L  M  +G +P   + N++    CR   +   L L  +M  +G +P    
Sbjct: 556 VGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTIT 615

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
             +++  L   G+ + A +   +M++ G   DI      +GGL      D A+ +F+ + 
Sbjct: 616 YGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLG 675

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
           A     ++   N +I  + K ++  EA++LF+ +   GL+P+ +TY ++I    K G+++
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVE 735

Query: 552 QAMLCLSRMLEKESGSP 568
           +A    S ++EK   +P
Sbjct: 736 EADNMFS-LMEKSGCAP 751



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 281/631 (44%), Gaps = 37/631 (5%)

Query: 36  LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCKSC----SVDLVEMRLK 90
           L++CL      ++  N+L  ++   G+  P+  SYN +++ LC+      ++DL+   +K
Sbjct: 160 LLKCLYHAKRSDDVVNLLLHRMPELGV-EPDTISYNTVVKTLCEDSRSQRALDLLHTMVK 218

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
             +  G   +  T   ++      G+  KA ++F+E++  G V + V ++ ++ A  K  
Sbjct: 219 --KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKAR 276

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            +DKA  ++ +M     + N+ T+  +IHG+    +  +   +F +MT  G   +    +
Sbjct: 277 AMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCN 336

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             +  LCK+ + + A + +  M   G  P+    S L+   + EG               
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFV------------ 384

Query: 270 NTMTLLCNSIMRILVSNGSI--DQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPN 323
             M  L NS    +  NG +   + +N++        + D   E ++IF    +  V P+
Sbjct: 385 -DMLNLFNS----MEGNGIVADQRVFNIVIDAYGKRGMMD---ETMLIFTQMQEQGVIPD 436

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             ++ I+I    + G+L  A+  F +M  +G      +Y++LI G C    L ++ EL+ 
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVS 496

Query: 384 EMEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
           EM   G  +P     NS+   LC+   VV A ++   +   G  P V     LI      
Sbjct: 497 EMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLV 556

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK  +AF  L  M+  G  PD+V Y+  I G     R+D  L LF ++ + G  P  + Y
Sbjct: 557 GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITY 616

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            II+ GL    R   A+ + +EMI  G    ++T  +++ G C++ N D   + + + L 
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN-NCDDEAIAMFKKLG 675

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             +   ++    T+ID +    + ++A  L++ +   G  PN  T+  +I  L K     
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVE 735

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            A   F +M++ G  P   +   +I   L +
Sbjct: 736 EADNMFSLMEKSGCAPSSRLLNYIIRVLLEK 766



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/643 (22%), Positives = 274/643 (42%), Gaps = 47/643 (7%)

Query: 49  ANMLFDQVKRE----GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           A  LF+++ RE     + +P   +YN L++  C++    +           G   D    
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERM- 161
           + LL+   ++ + D  +++    +    V  D   ++ ++    +     +A +L+  M 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
                   N  T+  +IHG  ++  V KA  LF +M + G   D   Y  II  LCK + 
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARA 277

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLL 275
           ++ A  +  +M  +G  P+    + +I   S  G+        W++     R++ +  L+
Sbjct: 278 MDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ--------WKETAGMFREMTSQGLM 329

Query: 276 -----CNSIMRILVSNGSIDQAYNLLQAM---------------IKGEPIADVGVEMLMI 315
                CNS M  L  +G   +A     +M               + G       V+ML +
Sbjct: 330 PNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNL 389

Query: 316 FKGT----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           F       +  +   F+I+I+   K G +D  + +F +M + G + +   Y  +I     
Sbjct: 390 FNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSR 449

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVK 430
             RL ++ +   +M   G KP     +S+ +  C   ++V A  LV +M  +G   P + 
Sbjct: 450 MGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIV 509

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
               +I  LCK G+ +EA      ++  G  PD++ +++ I G   + +++ A  +   +
Sbjct: 510 FFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
            + G  PDVV+YN +I G C+  R+ +   LF EM++KG+ P+  TY ++++G    G  
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
             A      M+E  + + D+ T   ++ GLC     D+AI ++ ++       N      
Sbjct: 630 VGAKKMCHEMIESGT-TMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +I  + K  +   A   F  +   G+ P+   +  +I   L E
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKE 731



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 157/329 (47%), Gaps = 5/329 (1%)

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM--EESGFKPTHFTLN 398
           D+   L   M ++G   +   YN ++  LC  +R + + +LL  M  +  G  P   T N
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   L R  +V  A NL  +M  QG  P V   T +I  LCK     +A   L  M+  
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF P+ V Y+  I G     +      +FR++ + G  P++V  N  +S LCK  +  EA
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSG-NIDQAMLCLSRMLEKESGSPDVITYTTLI 577
            + F+ M  KG  P++ TY++L++G+   G  +D  ML L   +E      D   +  +I
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVD--MLNLFNSMEGNGIVADQRVFNIVI 409

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
           D     G  D+ ++++ +M+E+G  P+  T+  +I    +  R   A+  F  M   G+K
Sbjct: 410 DAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
           P+  V+ +LI  F    N   A E++ EM
Sbjct: 470 PEGIVYHSLIQGFCMHGNLVKAKELVSEM 498



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 198/472 (41%), Gaps = 69/472 (14%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G  +E   +F ++  +GL +PN  + N  + +LCK             M   G   +  T
Sbjct: 311 GQWKETAGMFREMTSQGL-MPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVT 369

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + LL  Y   G F   L++FN +  +G V D+ VF+I++ A+ K G +D+   +  +M 
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  +  T+ ++I  F +  R+  A+  F++M   G   +  +Y  +I G C +  L 
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489

Query: 223 MALQLYSEMKGSGIT-PDFEILSKLITSCSDEGELTL------LVKEIWEDRDVNTMTLL 275
            A +L SEM   GI  P+    + +I S   EG +         V  I E  DV T   L
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKG--EPIA----------------DVGVEML--MI 315
            +    +    G I++A+ +L AMI    EP                  D G+ +   M+
Sbjct: 550 IDGYGLV----GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEML 605

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKL----------------------------------- 340
            KG V P T ++ II++ L  DG+                                    
Sbjct: 606 SKG-VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A+++F+++  +    N+ + N +ID +    + EE+ EL   +  +G  P   T   M
Sbjct: 665 DEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVM 724

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
            + L +   V  A N+   M   G  P  +    +I+ L + G+ ++A  ++
Sbjct: 725 IKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYM 776



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 191/429 (44%), Gaps = 27/429 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I   G  G+++E  ++F Q++ +G+ +P+  +Y  ++ A  +   +     +  +M   
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGV-IPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G   +      L+Q +C  G   KA  + +E++  G    ++  F+ ++ +  K G V +
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A ++ + +     R +  TF  LI G+    +++KA  + D M  +G   D   Y+ +I 
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G C+N +++  L L+ EM   G+ P       ++    ++G  T+  K++  +   +  T
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR-TVGAKKMCHEMIESGTT 645

Query: 274 L---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           +    C  I+  L  N   D+A     AM K     +V   + +I            + +
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAI----AMFKKLGAMNVKFNIAII------------NTM 689

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+ + K  K + A  LF  ++  G + N   Y  +I  L     +EE+  +   ME+SG 
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT--LLIKELCKHGKAMEA 448
            P+   LN + R L  + ++V A N +   +V G    ++ +T  LL+    + GK  E 
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYM--FKVDGKRISLEASTVSLLMALFSREGKYWED 807

Query: 449 FRFLTDMVQ 457
            + L    Q
Sbjct: 808 VKLLPAKYQ 816


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 193/376 (51%), Gaps = 27/376 (7%)

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +N  +D A +L   +++  P                +P    F+ I+ +L+K       L
Sbjct: 39  NNNDVDDAVSLFNRLLQQNP----------------TPPNIEFNKILGSLVKSKHYHTVL 82

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            L ++M   G   N+   N LI+  C    +  ++ +L ++ + G+KP   TLN++ + L
Sbjct: 83  YLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL 142

Query: 405 C------RRQDVVG----ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           C       +  +VG    A++L  KM ++   P V   T+L+   CK G+  EA   L  
Sbjct: 143 CLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAM 202

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+ +G  P +V Y++ + G   +K+V+ A  +F  +   G  PD+ +Y+I+I+G CK + 
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + EA +L  EM  K +IP+V TY+ LI+G CKSG I  A+  +  M ++    P+++TY+
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQ-PPNIVTYS 321

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           +++D LC   + D+AI L  +M+ +G  PN  T+  LI GLC+  +   A   F  +  K
Sbjct: 322 SILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVK 381

Query: 635 GMKPDMFVFVALISAF 650
           G   +++ +  +I  F
Sbjct: 382 GHNLNVYTYTVMIQGF 397



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 214/459 (46%), Gaps = 26/459 (5%)

Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRL 168
            + N+   D A+S+FN ++       ++ F+ +L +  K         L ++M+   I+ 
Sbjct: 36  TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 95

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-------- 220
           N     +LI+ F +   +  A  +  K+ K G+  +    + +I GLC N +        
Sbjct: 96  NLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV 155

Query: 221 --LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
             L+ A+ L+++M    I PD    + L+     EG        + E ++V  M ++   
Sbjct: 156 GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGR-------VKEAKNVLAM-MMIQG 207

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           I   +V+  S+   Y L++ + K + I +   ++       VSP+  S+ I+IN   K  
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL------GVSPDIQSYSILINGFCKIK 261

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            +D A+ L +EM     + NV  Y++LIDGLC S ++  + +L+ EM + G  P   T +
Sbjct: 262 MMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYS 321

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+   LC+   V  A+ L+ +M+ QG +P +   T+LIK LC+ GK  +A +   D++ +
Sbjct: 322 SILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVK 381

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G   ++  Y+  I G  D    D AL L   +  +GC P+   Y III  L K      A
Sbjct: 382 GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMA 441

Query: 519 EDLFNEMITKGLIPSVATYNLLING-WCKSGNIDQAMLC 556
           E L  EMI       VA  N LI   W    +   ++LC
Sbjct: 442 EKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSLLC 480



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 169/354 (47%), Gaps = 24/354 (6%)

Query: 320 VSPNTSSFDIIINTLLK-------------DGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           VS    SF  +INT                +  +D A+SLF  + Q         +N ++
Sbjct: 10  VSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKIL 69

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             L  S        L ++ME  G KP     N +    C+   +  A +++ K+   G++
Sbjct: 70  GSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYK 129

Query: 427 PWVKHNTLLIKELC-------KH---GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           P       LIK LC       KH   GK  +A      M+ E   PD+  ++  + G   
Sbjct: 130 PNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCK 189

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             RV  A  +   +   G  P VV YN ++ G    ++V +A+ +FN M   G+ P + +
Sbjct: 190 EGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQS 249

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           Y++LING+CK   +D+AM  L  M  K+   P+V+TY++LIDGLC +G+   A+ L +EM
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQI-IPNVVTYSSLIDGLCKSGKISYALKLVDEM 308

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            ++G  PN +T+ +++  LCK  +   A+     MK +G++P+M+ +  LI   
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 209/424 (49%), Gaps = 21/424 (4%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F   + VD A+ LF+++ +         ++ I+G L K+K     L L  +M+  GI P+
Sbjct: 37  FHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 96

Query: 240 FEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
               + LI S    G +    ++L K +      NT+TL  N++++ L  NG I   + +
Sbjct: 97  LVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITL--NTLIKGLCLNGKIHDKHCI 154

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  +   +   D+  +M++     ++P+  +F I+++   K+G++  A ++   M   G 
Sbjct: 155 VGKL---KDAVDLFNKMIL---ENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI 208

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
              V  YN+L+DG     ++ ++  +   M + G  P   + + +    C+ + +  A+ 
Sbjct: 209 KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAME 268

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+++M  +   P V   + LI  LCK GK   A + + +M   G  P+IV YS+ +  L 
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              +VD A+ L   +   G  P++  Y I+I GLC++ ++ +A  +F +++ KG   +V 
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY ++I G+C  G  D+A+  LS+M E     P+  TY  +I  L    + D+     NE
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKM-EDNGCIPNAKTYEIIILSLF---KKDE-----NE 439

Query: 596 MEEK 599
           M EK
Sbjct: 440 MAEK 443



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 11/306 (3%)

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           N+N ++++  L   + +    P +   N +   L + +     L L +KM  +G +P + 
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI----------DIKRV 480
           +  +LI   C+ G    AF  LT +++ G+ P+ +  +  I GL            + ++
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
             A++LF  +      PDV  + I++ G CK  RV EA+++   M+ +G+ P V TYN L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++G+     +++A    + M +    SPD+ +Y+ LI+G C     D+A+ L  EM  K 
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQ-LGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
             PN +T+ +LI GLCK  +   AL     M ++G  P++  + +++ A         A 
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337

Query: 661 EVLKEM 666
            +L +M
Sbjct: 338 ALLTQM 343



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 152/330 (46%), Gaps = 26/330 (7%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG +++A  LF+++  E +  P+ Y++  L++  CK   V   +  L  M   G      
Sbjct: 155 VGKLKDAVDLFNKMILENIN-PDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
           T   L+  Y    Q +KA S+FN +   G   D   +SIL+  F K   +D+A EL++ M
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
               I  N  T+  LI G  K  ++  AL+L D+M   G   +   Y  I+  LCKN Q+
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED-----RDVNTMTLLC 276
           + A+ L ++MK  GI P+    + LI      G+L    ++++ED      ++N  T   
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLE-DARKVFEDLLVKGHNLNVYTYTV 392

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
             +++     G  D+A  LL  M       D G            PN  +++III +L K
Sbjct: 393 --MIQGFCDKGLFDEALTLLSKM------EDNG----------CIPNAKTYEIIILSLFK 434

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
             + ++A  L  EM +      V L N+LI
Sbjct: 435 KDENEMAEKLLCEMIETNFDGRVALTNDLI 464



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 2/219 (0%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   LI     + +++EA  L  ++  + + +PN  +Y+ L++ LCKS  +      + E
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQI-IPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           M D G   +  T + +L   C + Q D A+++  ++ + G   + + ++IL+    + G+
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGK 367

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           ++ A ++ E +      LN  T+ V+I GF  K   D+AL L  KM  +G   +A  Y++
Sbjct: 368 LEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEI 427

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           II  L K  + EMA +L  EM  +       + + LI S
Sbjct: 428 IILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIAS 466



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G +  A  L D++   G   PN  +Y+ +L+ALCK+  VD     L +M++ 
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQ-PPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
           G   + YT T L++  C SG+ + A  VF +++  G  ++ + +++++  F   G  D+A
Sbjct: 347 GIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEA 406

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+ +M+D     N KT+ ++I    KK   + A +L  +M ++ F    A+ + +I  
Sbjct: 407 LTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIAS 466

Query: 215 L 215
           +
Sbjct: 467 I 467


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 226/488 (46%), Gaps = 23/488 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A  LF +M ++        +  ++  L   K     + L+ E+    I     ILS 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 246 LITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG- 302
           ++ SC      +L   V  I   + +    ++ N+++R L +   +  A +L + +++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 303 --EP----------------IADVGVEMLMIF-KGTVSPNTSSFDIIINTLLKDGKLDLA 343
             EP                      ++L +  +G+  PNT  + I+I+   KDG LD A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            SL  EM Q     ++F Y+ LID LC  ++ E    L  EM      P   T NS+   
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+   V  A  ++R M  +G +P V    ++I      G+   A      M+ +   P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ Y+  I G    K++D A+++ R+I   G  P +V  N+++ GL +  R   A++ F+
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM++ G IP + T+  L+ G+ K+G +++AM    + LE+     ++  YT +IDGLC  
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRREDTNIQIYTAVIDGLCKN 471

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+ D A   + ++   G  P+ IT+ A+I+G C+      A    R M++ G   D   +
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTY 531

Query: 644 VALISAFL 651
             ++  FL
Sbjct: 532 NVIVRGFL 539



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 239/543 (44%), Gaps = 26/543 (4%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           +V  +++A  LF Q+ R    +P+  S++ LL+AL        V    +E+        +
Sbjct: 49  NVKCLDDAFSLFRQMVRTK-PLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHE 107

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIER 160
           + L+ ++   C   + D   SV       G   ++ +F+ LL       +V  A  L ++
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKK 167

Query: 161 MDDCNI-RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           +   NI   NE  +  +++G  KK    KA  L   M +     +  +Y ++I   CK+ 
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDG 227

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSD----EGELTLLVKEIWEDRDVNTMTLL 275
            L+ A  L +EMK   I PD    S LI +       E   TL ++ I  +   N  T  
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF- 286

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            NS++  L   G ++ A  +++ MI+               KG V P+  ++++II+   
Sbjct: 287 -NSVIDGLCKEGKVEDAEEIMRYMIE---------------KG-VDPDVITYNMIIDGYG 329

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
             G++D A  +F  M       N+  YN LI+G     +++E+ ++ RE+ + G KP+  
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +   L        A N   +M   GH P +  +  L+    K+G   EA      +
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            +     +I  Y+A I GL    ++D A   F  +   G  PDV+ Y  +ISG C+   +
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            EA+D+  +M   G +    TYN+++ G+ +S  + +    L  +  K S S +  T   
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK-SFSFEAATVEL 568

Query: 576 LID 578
           L+D
Sbjct: 569 LMD 571



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 190/457 (41%), Gaps = 49/457 (10%)

Query: 2   ASILSRARRIAPLRVLAQD-----VVKSRCFMSPGALGF--------------------L 36
           +S++S  R I  LR+   +     VV S C M    LGF                    L
Sbjct: 89  SSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTL 148

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           +R L +   V++A  LF ++ RE +C PN   Y  ++  LCK          L+ M+   
Sbjct: 149 LRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS 208

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKAC 155
              +    + ++  +C  G  D A S+ NE+       D   +S L+ A  K  + +   
Sbjct: 209 TKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L   M   NI  N  TF  +I G  K+ +V+ A ++   M + G   D   Y++II G 
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKEIWEDRDVNTM 272
               Q++ A +++  M    I P+    + LI   + +    E   + +EI + + +   
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQ-KGLKPS 387

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI---FK-GTVSPNTSSFD 328
            + CN ++  L   G    A N    M+    I D+     ++   FK G V    S F 
Sbjct: 388 IVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFH 447

Query: 329 ---------------IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                           +I+ L K+GKLD A + F ++  IG   +V  Y  +I G C   
Sbjct: 448 KLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            L+E+ ++LR+ME++G    + T N + R   R   V
Sbjct: 508 LLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV 544



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 37/256 (14%)

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--------------CA 492
           +AF     MV+   LP +V +S  +  L+ +K     + LFR+I                
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 493 HGCC--------------------P-DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           + CC                    P + V +N ++ GL    +V +A  LF +++ + + 
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 532 -PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+   Y  ++NG CK G+  +A   L R++E+ S  P+   Y+ +ID  C  G  D A 
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            L NEM++K   P+  T+  LI  LCK  +       F  M    + P++  F ++I   
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 651 LSELNPPLAFEVLKEM 666
             E     A E+++ M
Sbjct: 294 CKEGKVEDAEEIMRYM 309



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 2/222 (0%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  +  ++ ++GL  P+  + N LL  L +       +    EM   G   D YT  
Sbjct: 369 IDEAMQVCREISQKGL-KPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHC 427

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            LL  Y  +G  ++A+S F+++       +  +++ ++    K G++DKA    E++   
Sbjct: 428 TLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLI 487

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +  +  T+  +I G+ ++  +D+A  +  KM  +G  +D   Y+VI+ G  ++ ++   
Sbjct: 488 GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEM 547

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
                E+ G   + +   +  L+   +++  L  ++ E   D
Sbjct: 548 KAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHRD 589


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 273/620 (44%), Gaps = 46/620 (7%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +YN L+        V+ +   L+ M + G   +  T T L++ YC  G  ++A  VF
Sbjct: 45  NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 104

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + +   V D+H++ +L+  + + G++  A  + + M +  +R N      LI+G+ K 
Sbjct: 105 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 164

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +A Q+F +M       D   Y+ ++ G C+   ++ AL+L  +M    + P     
Sbjct: 165 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 224

Query: 244 SKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + L+   S  G    ++  +W+    R VN   + C++++  L   G  ++A  L + ++
Sbjct: 225 NILLKGYSRIGAFHDVL-SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 283

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
               + D                T + +++I+ L K  K++ A  +   +    C   V 
Sbjct: 284 ARGLLTD----------------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 327

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y  L  G      L+E++ +   ME  G  PT    N++     + + +    +LV ++
Sbjct: 328 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 387

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G  P V     LI   C  G   +A+    +M+++G   ++   S     L  + ++
Sbjct: 388 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKI 447

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGL--------------CKAQRVAEAEDLFNEMI 526
           D A  L + I         V +++++ G                K Q++AE+ +  N   
Sbjct: 448 DEACLLLQKI---------VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTP 496

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            K L+P+   YN+ I G CK+G ++ A    S +L  +   PD  TYT LI G  IAG  
Sbjct: 497 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 556

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           + A  L +EM  KG  PN +T+ ALI GLCK      A      + +KG+ P+   +  L
Sbjct: 557 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 616

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I   +   N   A  + ++M
Sbjct: 617 IDGLVKSGNVAEAMRLKEKM 636



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 157/613 (25%), Positives = 276/613 (45%), Gaps = 54/613 (8%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           ++R  R+   R ++++VV             LI+     GL+EEA  +F+ +K + L V 
Sbjct: 65  MTRVLRLMSERGVSRNVVTYTS---------LIKGYCKKGLMEEAEHVFELLKEKKL-VA 114

Query: 65  NNYSYNCLLEALCKSCSV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           + + Y  L++  C++  + D V +    M + G   +      L+  YC SGQ  +A  +
Sbjct: 115 DQHMYGVLMDGYCRTGQIRDAVRVH-DNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 173

Query: 124 FNEIIDHGWV---DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           F+ + D  W    D H ++ L+  + + G VD+A +L ++M    +     T+ +L+ G+
Sbjct: 174 FSRMND--WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 231

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +       L L+  M K G  +D      ++  L K      A++L+  +   G+  D 
Sbjct: 232 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 291

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRD-------VNTMTLLCNSIMRILVSNGSIDQAY 293
             L+ +I+    + E     KEI ++ +       V T   L +   ++    G++ +A+
Sbjct: 292 ITLNVMISGLC-KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV----GNLKEAF 346

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
                           V+  M  KG + P    ++ +I+   K   L+    L  E+   
Sbjct: 347 ---------------AVKEYMERKG-IFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 390

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G    V  Y  LI G CN   ++++Y    EM E G        + +   L R   +  A
Sbjct: 391 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 450

Query: 414 LNLVRK-----MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
             L++K     + + G++   +          K  K  E+    T   ++  +P+ + Y+
Sbjct: 451 CLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP--KKLLVPNNIVYN 508

Query: 469 AAIGGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
            AI GL    +++ A +LF D+ +     PD   Y I+I G   A  + +A  L +EM  
Sbjct: 509 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 568

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG+IP++ TYN LI G CK GN+D+A   L ++ +K   +P+ ITY TLIDGL  +G   
Sbjct: 569 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVA 627

Query: 588 DAIMLWNEMEEKG 600
           +A+ L  +M EKG
Sbjct: 628 EAMRLKEKMIEKG 640



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 208/466 (44%), Gaps = 51/466 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T  ++++ + +   VDKA+ +F K T+S                     LE+ +  Y+ +
Sbjct: 12  TCSIVVNAYCRSGNVDKAM-VFAKETESSLG------------------LELNVVTYNSL 52

Query: 232 -KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
             G  +  D E +++++   S+ G            R+V T T    S+++     G ++
Sbjct: 53  INGYAMIGDVEGMTRVLRLMSERGV----------SRNVVTYT----SLIKGYCKKGLME 98

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A ++ + + + + +AD                   + ++++   + G++  A+ +   M
Sbjct: 99  EAEHVFELLKEKKLVAD----------------QHMYGVLMDGYCRTGQIRDAVRVHDNM 142

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            +IG   N  + N+LI+G C S +L E+ ++   M +   KP H T N++    CR   V
Sbjct: 143 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 202

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL L  +M  +   P V    +L+K   + G   +       M++ G   D +  S  
Sbjct: 203 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 262

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           +  L  +   + A++L+ ++ A G   D +  N++ISGLCK ++V EA+++ + +     
Sbjct: 263 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 322

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P+V TY  L +G+ K GN+ +A   +   +E++   P +  Y TLI G       +   
Sbjct: 323 KPAVQTYQALSHGYYKVGNLKEA-FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 381

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
            L  E+  +G  P   T+ ALITG C       A      M EKG+
Sbjct: 382 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 427



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 220/512 (42%), Gaps = 63/512 (12%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+EA  L DQ+ ++ + VP   +YN LL+   +  +   V    K M   G   D+ +
Sbjct: 200 GYVDEALKLCDQMCQKEV-VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 258

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + LL+     G F++A+ ++  ++  G + D    ++++    K  +V++A E+++ ++
Sbjct: 259 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 318

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +   +T+  L HG+ K   + +A  + + M + G      MY+ +I G  K + L 
Sbjct: 319 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 378

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
               L  E++  G+TP       LIT   + G +       +E  ++ +     +C+ I 
Sbjct: 379 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 438

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L     ID+A  LLQ ++  + +   G + L  F           +    T LK  K+
Sbjct: 439 NSLFRLDKIDEACLLLQKIVDFDLLLP-GYQSLKEF----------LEASATTCLKTQKI 487

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNS 399
             A S+     +   + N  +YN  I GLC + +LE++ +L  ++  S  F P  +T   
Sbjct: 488 --AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY-- 543

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                                            T+LI      G   +AF    +M  +G
Sbjct: 544 ---------------------------------TILIHGCAIAGDINKAFTLRDEMALKG 570

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +P+IV Y+A I GL  +  VD A  L   +   G  P+ + YN +I GL K+  VAEA 
Sbjct: 571 IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 630

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            L  +MI KG          L+ G  K G++D
Sbjct: 631 RLKEKMIEKG----------LVRGSDKQGDVD 652



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/572 (22%), Positives = 228/572 (39%), Gaps = 63/572 (11%)

Query: 139 SILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           SI++ A+ + G VDKA    +  +    + LN  T+  LI+G+     V+   ++   M+
Sbjct: 14  SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 73

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL- 256
           + G + +   Y  +I G CK   +E A  ++  +K   +  D  +   L+      G++ 
Sbjct: 74  ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 133

Query: 257 -TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
             + V +   +  V T T +CNS++     +G + +A  +   M                
Sbjct: 134 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM---------------- 177

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
              ++ P+  +++ +++   + G +D AL L  +M Q   +  V  YN L+ G       
Sbjct: 178 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 237

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            +   L + M + G      + +++   L +  D   A+ L   +  +G         ++
Sbjct: 238 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 297

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK  K  EA   L ++      P +  Y A   G   +  +  A  +   +   G 
Sbjct: 298 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 357

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P +  YN +ISG  K + + +  DL  E+  +GL P+VATY  LI GWC  G ID+A  
Sbjct: 358 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 417

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW---------------------- 593
               M+EK   + +V   + + + L    + D+A +L                       
Sbjct: 418 TCFEMIEK-GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 476

Query: 594 ----------------NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR-MMKEKGM 636
                           N   +K   PN I +   I GLCK  +   A   F  ++     
Sbjct: 477 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 536

Query: 637 KPDMFVFVALIS--AFLSELNPPLAFEVLKEM 666
            PD + +  LI   A   ++N   AF +  EM
Sbjct: 537 IPDEYTYTILIHGCAIAGDINK--AFTLRDEM 566



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 167/351 (47%), Gaps = 8/351 (2%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEES 378
           VSP+  +  I++N   + G +D A+   +E  + +G   NV  YN+LI+G      +E  
Sbjct: 6   VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 65

Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTLL 435
             +LR M E G      T  S+ +  C++   ++      L+++ ++   +       +L
Sbjct: 66  TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY---GVL 122

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           +   C+ G+  +A R   +M++ G   +    ++ I G     ++  A ++F  +     
Sbjct: 123 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 182

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD   YN ++ G C+A  V EA  L ++M  K ++P+V TYN+L+ G+ + G     +L
Sbjct: 183 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF-HDVL 241

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L +M+ K   + D I+ +TL++ L   G  ++A+ LW  +  +G   + IT   +I+GL
Sbjct: 242 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 301

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           CK ++   A      +     KP +  + AL   +    N   AF V + M
Sbjct: 302 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 352



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 173/375 (46%), Gaps = 46/375 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S L +  ++   + +  +V   RC  +      L      VG ++EA  + + ++R+G
Sbjct: 297 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 356

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  P    YN L+    K   ++ V   + E++  G      T   L+  +CN G  DKA
Sbjct: 357 I-FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 415

Query: 121 LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +   E+I+ G  ++ ++ S +  +  +  ++D+AC L++++ D         F +L+ G
Sbjct: 416 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD---------FDLLLPG 466

Query: 180 F--------------VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +              +K  ++ ++++  +   K     +  +Y+V I GLCK  +LE A 
Sbjct: 467 YQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 524

Query: 226 QLYSEMKGSG-ITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRI 282
           +L+S++  S    PD    + LI  C+  G++     +++    + +    +  N++++ 
Sbjct: 525 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 584

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G++D+A  LL  + +               KG ++PN  +++ +I+ L+K G +  
Sbjct: 585 LCKLGNVDRAQRLLHKLPQ---------------KG-ITPNAITYNTLIDGLVKSGNVAE 628

Query: 343 ALSLFREMTQIGCMQ 357
           A+ L  +M + G ++
Sbjct: 629 AMRLKEKMIEKGLVR 643



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIA 583
           MI+  + P V T ++++N +C+SGN+D+AM+  ++  E   G   +V+TY +LI+G  + 
Sbjct: 1   MISFEVSPDVFTCSIVVNAYCRSGNVDKAMV-FAKETESSLGLELNVVTYNSLINGYAMI 59

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G  +    +   M E+G + N +T+ +LI G CK      A   F ++KEK +  D  ++
Sbjct: 60  GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 119

Query: 644 VALISAF 650
             L+  +
Sbjct: 120 GVLMDGY 126


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 268/616 (43%), Gaps = 100/616 (16%)

Query: 11  IAPLRVL-----AQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPN 65
           I+PL VL     + D+ KS    SP     L+R    +G  E A  +  +++ +G  V  
Sbjct: 73  ISPLEVLDALISSYDICKS----SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWV-T 127

Query: 66  NYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
            +++N  L  L K   V+    R  +M                               + 
Sbjct: 128 VHAWNNFLSHLLKLNDVN----RFWKM-------------------------------YK 152

Query: 126 EIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
           E++ +G+++  + F++++ A  K G + +A  +I R     I  N  TF ++I G +K  
Sbjct: 153 EMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMG 212

Query: 185 RVDKALQLFDKM---TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
            +D AL+L  KM   +      D+  Y+  + G CK   L +A +   EM G  I P+  
Sbjct: 213 AMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPN-- 270

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                      V T   L +   R+    GS++ A+ L   +++
Sbjct: 271 ---------------------------VRTYATLVDGYTRV----GSLENAFRLCDELVE 299

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG + PN+  ++ II+ L  +G ++ A  L  +M       + F 
Sbjct: 300 ---------------KGLL-PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFT 343

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +I+GLC +  L E+++ L+ + E       F+ N +   LCR  ++ GA  L+  M 
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMY 403

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           V+G  P V     LI   CK GK   A +    M++ G  P+++ Y++ I G       D
Sbjct: 404 VRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFD 463

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+ L   +   G   DVV YN +I G C   ++ +A  LF+EM   G++ S  TYN LI
Sbjct: 464 PAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLI 522

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           N  CK+G++ QA   L +M+      PD +TYT LI        P++ I L + M  KG 
Sbjct: 523 NSLCKAGHVLQAKE-LMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGV 581

Query: 602 APNRITFMALITGLCK 617
            P+R T+  ++  L +
Sbjct: 582 VPDRQTYQTMVIPLLQ 597



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 228/515 (44%), Gaps = 25/515 (4%)

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           LI   D C  + +   F  L+    +    + A ++  K+   GF      ++  +  L 
Sbjct: 82  LISSYDIC--KSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLL 139

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV----NTM 272
           K   +    ++Y EM   G   +    + +I +   EG L   V  I+         N +
Sbjct: 140 KLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVV 199

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIII 331
           T   N I+   +  G++D A  L++ M               +  G +V P++ +++  +
Sbjct: 200 TF--NMIIDGAIKMGAMDLALKLVRKM--------------EVMSGCSVKPDSVTYNSFV 243

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N   K G L +A    +EM       NV  Y  L+DG      LE ++ L  E+ E G  
Sbjct: 244 NGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLL 303

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P     NS+   L    D+ GA  L+  M  +   P     +++I+ LC++G   EAF+F
Sbjct: 304 PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKF 363

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  +++   + D   ++  I  L     +  A +L  ++   G  PDVV +  +I   CK
Sbjct: 364 LQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCK 423

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
             +V  A  ++ +MI  G  P++  YN +ING+ K G+ D A+L +  +  +  G  DV+
Sbjct: 424 DGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTL--RRMGLFDVV 481

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           TY TLI G C  G+ D A  L++EM   G   + +T+  LI  LCK      A    +MM
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +G+ PD   +  LI++F  + +P    E+   M
Sbjct: 542 VLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYM 576



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 229/508 (45%), Gaps = 26/508 (5%)

Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG--LCKNKQLEMALQLYSEM 231
           CV+IH  V   R D AL +   +      S   + D +I    +CK+        + +  
Sbjct: 45  CVVIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCT 104

Query: 232 KGSGITPDFEILSKL------ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
           +       +E+++KL      +T  +    L+ L+K      DVN        + + +VS
Sbjct: 105 QIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKL----NDVNRFW----KMYKEMVS 156

Query: 286 NGSIDQ--AYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
            G I+    +NL+  A+ K   + +    +    K  + PN  +F++II+  +K G +DL
Sbjct: 157 YGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDL 216

Query: 343 ALSLFREMTQI-GC--MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           AL L R+M  + GC    +   YN+ ++G C    L  + E  +EM     +P   T  +
Sbjct: 217 ALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYAT 276

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           +     R   +  A  L  ++  +G  P  V +N++ I  L   G    A   L+DM+ +
Sbjct: 277 LVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSI-IHWLSMEGDMEGASLLLSDMIDK 335

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              PD   YS  I GL     ++ A +  + I       D  ++N++I+ LC++  +A A
Sbjct: 336 RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA 395

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           + L   M  +GL+P V T+  LI+  CK G ++ A+    +M+ K    P+++ Y ++I+
Sbjct: 396 KQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMI-KTGEKPNLLIYNSVIN 454

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G    G  D AI+L + +   G   + +T+  LI G C C +   A   F  M+  G+  
Sbjct: 455 GFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILA 513

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
               +  LI++     +   A E++K M
Sbjct: 514 SHVTYNTLINSLCKAGHVLQAKELMKMM 541


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 273/620 (44%), Gaps = 46/620 (7%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +YN L+        V+ +   L+ M + G   +  T T L++ YC  G  ++A  VF
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             + +   V D+H++ +L+  + + G++  A  + + M +  +R N      LI+G+ K 
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +A Q+F +M       D   Y+ ++ G C+   ++ AL+L  +M    + P     
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439

Query: 244 SKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           + L+   S  G    ++  +W+    R VN   + C++++  L   G  ++A  L + ++
Sbjct: 440 NILLKGYSRIGAFHDVL-SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
               + D                T + +++I+ L K  K++ A  +   +    C   V 
Sbjct: 499 ARGLLTD----------------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 542

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y  L  G      L+E++ +   ME  G  PT    N++     + + +    +LV ++
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
           R +G  P V     LI   C  G   +A+    +M+++G   ++   S     L  + ++
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKI 662

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGL--------------CKAQRVAEAEDLFNEMI 526
           D A  L + I         V +++++ G                K Q++AE+ +  N   
Sbjct: 663 DEACLLLQKI---------VDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTP 711

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            K L+P+   YN+ I G CK+G ++ A    S +L  +   PD  TYT LI G  IAG  
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           + A  L +EM  KG  PN +T+ ALI GLCK      A      + +KG+ P+   +  L
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I   +   N   A  + ++M
Sbjct: 832 IDGLVKSGNVAEAMRLKEKM 851



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 144/591 (24%), Positives = 260/591 (43%), Gaps = 66/591 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI     +G VE    +   +   G+   N  +Y  L++  CK   ++  E   + +++ 
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVS-RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               D++    L+  YC +GQ   A+ V + +I+ G   +  + + L+  + K G++ +A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++  RM+D +++ +  T+  L+ G+ +   VD+AL+L D+M +         Y++++ G
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNT 271
             +       L L+  M   G+  D    S L+ +    G+    +K +WE+   R + T
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK-LWENVLARGLLT 504

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLL---------------QAMIKGE-PIADV----GVE 311
            T+  N ++  L     +++A  +L               QA+  G   + ++     V+
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
             M  KG + P    ++ +I+   K   L+    L  E+   G    V  Y  LI G CN
Sbjct: 565 EYMERKG-IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623

Query: 372 SNRLEESYELLREMEESGFKPT----HFTLNSMFR-------CLCRRQDV---------- 410
              ++++Y    EM E G            NS+FR       CL  ++ V          
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683

Query: 411 -------VGALNLVRKMR----VQGHEP---WVKHN---TLLIKELCKHGKAMEAFRFLT 453
                    A   ++  +    V+   P    V +N    + I  LCK GK  +A +  +
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743

Query: 454 DMVQ-EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
           D++  + F+PD   Y+  I G      ++ A  L  ++   G  P++V YN +I GLCK 
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803

Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
             V  A+ L +++  KG+ P+  TYN LI+G  KSGN+ +AM    +M+EK
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 228/503 (45%), Gaps = 20/503 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF ++L  +++ G V  A  + + M +     +  +   L+   V+K     AL ++D+M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSDEGE 255
                + D     +++   C++  ++ A+    E + S G+  +    + LI   +  G+
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276

Query: 256 LTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
           +  + +   +  +R V+   +   S+++     G +++A ++ + + + + +AD      
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD------ 330

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
                        + ++++   + G++  A+ +   M +IG   N  + N+LI+G C S 
Sbjct: 331 ----------QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           +L E+ ++   M +   KP H T N++    CR   V  AL L  +M  +   P V    
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +L+K   + G   +       M++ G   D +  S  +  L  +   + A++L+ ++ A 
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G   D +  N++ISGLCK ++V EA+++ + +      P+V TY  L +G+ K GN+ +A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              +   +E++   P +  Y TLI G       +    L  E+  +G  P   T+ ALIT
Sbjct: 561 -FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619

Query: 614 GLCKCDRPRAALVHFRMMKEKGM 636
           G C       A      M EKG+
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGI 642



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 220/512 (42%), Gaps = 63/512 (12%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+EA  L DQ+ ++ + VP   +YN LL+   +  +   V    K M   G   D+ +
Sbjct: 415 GYVDEALKLCDQMCQKEV-VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + LL+     G F++A+ ++  ++  G + D    ++++    K  +V++A E+++ ++
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               +   +T+  L HG+ K   + +A  + + M + G      MY+ +I G  K + L 
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
               L  E++  G+TP       LIT   + G +       +E  ++ +     +C+ I 
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L     ID+A  LLQ ++  + +   G + L  F           +    T LK  K+
Sbjct: 654 NSLFRLDKIDEACLLLQKIVDFDLLLP-GYQSLKEF----------LEASATTCLKTQKI 702

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNS 399
             A S+     +   + N  +YN  I GLC + +LE++ +L  ++  S  F P  +T   
Sbjct: 703 --AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY-- 758

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
                                            T+LI      G   +AF    +M  +G
Sbjct: 759 ---------------------------------TILIHGCAIAGDINKAFTLRDEMALKG 785

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
            +P+IV Y+A I GL  +  VD A  L   +   G  P+ + YN +I GL K+  VAEA 
Sbjct: 786 IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 845

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            L  +MI KG          L+ G  K G++D
Sbjct: 846 RLKEKMIEKG----------LVRGSDKQGDVD 867



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 173/375 (46%), Gaps = 46/375 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           M S L +  ++   + +  +V   RC  +      L      VG ++EA  + + ++R+G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           +  P    YN L+    K   ++ V   + E++  G      T   L+  +CN G  DKA
Sbjct: 572 I-FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630

Query: 121 LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            +   E+I+ G  ++ ++ S +  +  +  ++D+AC L++++ D         F +L+ G
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD---------FDLLLPG 681

Query: 180 F--------------VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +              +K  ++ ++++  +   K     +  +Y+V I GLCK  +LE A 
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739

Query: 226 QLYSEMKGSG-ITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRI 282
           +L+S++  S    PD    + LI  C+  G++     +++    + +    +  N++++ 
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 799

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G++D+A  LL  + +               KG ++PN  +++ +I+ L+K G +  
Sbjct: 800 LCKLGNVDRAQRLLHKLPQ---------------KG-ITPNAITYNTLIDGLVKSGNVAE 843

Query: 343 ALSLFREMTQIGCMQ 357
           A+ L  +M + G ++
Sbjct: 844 AMRLKEKMIEKGLVR 858


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/670 (23%), Positives = 279/670 (41%), Gaps = 136/670 (20%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N +++ L K    D     L+E+++        T + L+  Y  SG  +KA+  F ++
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            D G   D   ++ +L    +      A  +  +M   N   N  TF +L++G  K  + 
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           D AL++FD+MT+ G   +  +Y +I+ GLC+ K+ +   +L + MK SG  PD       
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD------- 270

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK-GEPI 305
                                     ++ CN+++      G ID+A+ LLQ   K G  +
Sbjct: 271 --------------------------SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVL 304

Query: 306 ADVGVEMLM------------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              G   L+                  +FK  + P+   + I+I    + G +D AL++ 
Sbjct: 305 GIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNML 364

Query: 348 REMTQIGCMQNVFLYNNLIDGLCN-----------------------------------S 372
            +MTQ G   + + YN LI G C+                                   +
Sbjct: 365 NDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRN 424

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV---------- 422
             L+E+ ++  +ME  G  P+  T N++   LC+  ++  A +L  KM +          
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484

Query: 423 -QGHEPWVKHNTL--LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            QG +  +   +L  +++ LC+ G  ++A++ L  +   G +PDI+ Y+  I G    K 
Sbjct: 485 SQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN 544

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           ++ A +LFR++   G  PD V Y  +I G  +  R  +A  + ++M+  G  PS A Y  
Sbjct: 545 INGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKC 604

Query: 540 LINGWCKSGNI----------------------------------DQAMLCLSRMLEKES 565
           L+   C+ G +                                  ++A+ CL  M  K +
Sbjct: 605 LMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN 664

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
              ++  YT  + GLC A R ++A+ ++  ++E     N  + + LI GLCK      A+
Sbjct: 665 NF-EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAV 723

Query: 626 VHFRMMKEKG 635
             F    EKG
Sbjct: 724 DIFLYTLEKG 733



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 224/535 (41%), Gaps = 67/535 (12%)

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           ++ R +   + F   T+         ++++I  L K+   +   ++  E+K S I     
Sbjct: 73  EQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP 132

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAM 299
             S LI + +  G     V+   + +D          NSI+ ++V       A  +   M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K                   +PN ++F I++N L K+GK D AL +F EMTQ G   N 
Sbjct: 193 LKL----------------NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +Y  ++ GLC + R ++ + LL  M+ SG  P   T N++    C+   +  A  L++ 
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
              +G+   +K  + LI  L +  +  E   +   M + G  PD+V Y+  I G  ++  
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           VD AL +  D+   G  PD   YN +I G C    + +A  L  E+      P+  TY +
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME-- 597
           LI G C++G +D+A    ++M E    SP ++T+  LIDGLC AG  ++A  L+ +ME  
Sbjct: 417 LICGMCRNGLLDEARQIFNQM-ENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIG 475

Query: 598 ----------------------------------------------EKGCAPNRITFMAL 611
                                                         + G  P+ +T+  L
Sbjct: 476 KNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVL 535

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I G CK      A   FR ++ KG  PD   +  LI  F        AF VL +M
Sbjct: 536 INGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 256/585 (43%), Gaps = 87/585 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L   G  ++A  +FD++ ++G+  PN   Y  +L  LC++   D V   L  M+  
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGI-PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVS 265

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D  T   LL  +C  GQ D+A ++       G+V     +S L+    +    D+ 
Sbjct: 266 GCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEV 325

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD---------- 204
            E   +M    I  +   + +LI GF +   VD AL + + MT+ G + D          
Sbjct: 326 QEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG 385

Query: 205 -------------------------AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                                    +  Y ++I G+C+N  L+ A Q++++M+  G +P 
Sbjct: 386 FCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPS 445

Query: 240 FEILSKLITSCSDEGELT----LLVK-EIWE------------DRDVNTMTLLCNSIMRI 282
               + LI      GEL     L  K EI +            DR ++T +L   +++  
Sbjct: 446 IMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASL--QTMVER 503

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +G I +AY LL  +      AD GV           P+  +++++IN   K   ++ 
Sbjct: 504 LCESGLILKAYKLLMQL------ADSGV----------VPDIMTYNVLINGFCKAKNING 547

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  LFRE+   G   +   Y  LIDG    +R E+++ +L +M ++G  P+    +++++
Sbjct: 548 AFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPS----SAVYK 603

Query: 403 CL----CRRQDVVGALNLVRKMRVQGHEPWVKHNTL-LIKELCKHGKAMEAFRFLTDMVQ 457
           CL    CR+  +  A +L   ++     P  +  TL L +E  + G+  +A R L +M  
Sbjct: 604 CLMTWSCRKGKLSVAFSLW--LKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 661

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN--IIISGLCKAQRV 515
           +    +I  Y+  + GL   +R + AL++F  +    C  DV   +  ++I+GLCK   +
Sbjct: 662 KLNNFEIAPYTIWLIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVMLINGLCKDGNL 719

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
             A D+F   + KG +      N L+        +  A+  L+RM
Sbjct: 720 EMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 175/390 (44%), Gaps = 30/390 (7%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           R L  ++ K+ CF +      LI  +   GL++EA  +F+Q++  G C P+  ++N L++
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG-CSPSIMTFNALID 454

Query: 75  ALCKSCSVDLVEMRLKEMQ---------DYGWGYDKYTLTPLLQV----YCNSGQFDKAL 121
            LCK+  ++       +M+             G D+   T  LQ      C SG   KA 
Sbjct: 455 GLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAY 514

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +  ++ D G V D   +++L+  F K   ++ A +L   +       +  T+  LI GF
Sbjct: 515 KLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF 574

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            +  R + A ++ D+M K+G    +A+Y  ++   C+  +L +A  L+ +   S  + + 
Sbjct: 575 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED 634

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           E L KL     ++GEL   V+ + E              M   ++N  I      L  + 
Sbjct: 635 ETL-KLAEEHFEKGELEKAVRCLLE--------------MNFKLNNFEIAPYTIWLIGLC 679

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +     +     L++ +  +  N  S  ++IN L KDG L++A+ +F    + G M    
Sbjct: 680 QARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPR 739

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGF 390
           + N L+  L   ++++ + +LL  M  +G+
Sbjct: 740 ICNQLLRSLILQDKMKHALDLLNRMNSAGY 769



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 29  SPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV- 85
           SP ++  G LI     V   E+A  + DQ+ + G C P++  Y CL+   C+   + +  
Sbjct: 561 SPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG-CTPSSAVYKCLMTWSCRKGKLSVAF 619

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVA 144
            + LK ++      D+ TL  L + +   G+ +KA+    E+       +   ++I L+ 
Sbjct: 620 SLWLKYLRSLPSQEDE-TLK-LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIG 677

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             +    ++A ++   + +C + +N  +  +LI+G  K   ++ A+ +F    + GF   
Sbjct: 678 LCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLM 737

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             + + ++  L    +++ AL L + M  +G   D E L   I S
Sbjct: 738 PRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLD-EYLHHRIKS 781


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 222/455 (48%), Gaps = 24/455 (5%)

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           L +N +LE   +    M   G  PD       + +C      T L++E  +       T 
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPD-------VVAC------TALIREFCKIGRTKNAT- 124

Query: 275 LCNSIMRILVSNGSIDQA--YN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
               IM IL  +G++  A  YN L+ A  K   I +    + ++   +V+PN +++D ++
Sbjct: 125 ---RIMGILEESGAVIDANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVL 178

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
            +L   GKL  A+ +     Q  C  +V     LID  C  + + ++ +L  EM   G K
Sbjct: 179 CSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCK 238

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T N + +  C+   +  A+  ++K+   G +  V  + ++++ LC  G+ M+A + 
Sbjct: 239 PDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKL 298

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L  M+++G  P +V ++  I  L     +  AL +   +  HG  P+  ++N +I G C 
Sbjct: 299 LATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 358

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            + +  A +    M+++G  P + TYN+L+   CK G +D A++ LS+ L  +  SP +I
Sbjct: 359 RKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ-LSSKGCSPSLI 417

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           +Y T+IDGL   G+ + A+ L  EM  KG  P+ IT  +++ GL +  +   A+  F  +
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL 477

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  G+KP+ F++ +++          LA + L +M
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 225/505 (44%), Gaps = 53/505 (10%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GE+++    +E M +     +      LI  F K  R   A ++   + +SG   DA  Y
Sbjct: 83  GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSY 142

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
           +V+I   CK+ ++E AL++   +  + + P+      ++ S  D G+L            
Sbjct: 143 NVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKL------------ 187

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
                                 QA  +L   ++ +                  P+  +  
Sbjct: 188 ---------------------KQAMQVLDRQLQSK----------------CYPDVVTCT 210

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++I+   K+  +  A+ LF EM   GC  +V  YN LI G C   RL+E+   L+++   
Sbjct: 211 VLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSY 270

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
           G +    + N + R LC     + A+ L+  M  +G  P V    +LI  LC+ G   +A
Sbjct: 271 GCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKA 330

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L  M + G  P+   ++  I G  + K +D A+E    + + GC PD+V YNI+++ 
Sbjct: 331 LNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTA 390

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LCK  +V +A  + +++ +KG  PS+ +YN +I+G  K G  + A+  L  M  K    P
Sbjct: 391 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKP 449

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D+IT T+++ GL   G+  +AI  ++ ++  G  PN   + +++ GLCK  +   A+   
Sbjct: 450 DLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL 509

Query: 629 RMMKEKGMKPDMFVFVALISAFLSE 653
             M   G KP    +  LI     E
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYE 534



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 220/468 (47%), Gaps = 22/468 (4%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
           L+ M + G   D    T L++ +C  G+   A  +   + + G V D + +++L+ A+ K
Sbjct: 92  LEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCK 151

Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
            GE+++A   +  +D  ++  N  T+  ++     + ++ +A+Q+ D+  +S    D   
Sbjct: 152 SGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVT 208

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWE 265
             V+I   CK   +  A++L++EM+G G  PD    + LI     EG L   ++  +   
Sbjct: 209 CTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLP 268

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                +  +  N I+R L S G    A  LL  M++               KG   P+  
Sbjct: 269 SYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLR---------------KGCF-PSVV 312

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+I+IN L + G L  AL++   M + G   N   +N LI G CN   ++ + E L  M
Sbjct: 313 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM 372

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G  P   T N +   LC+   V  A+ ++ ++  +G  P +     +I  L K GKA
Sbjct: 373 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A   L +M  +G  PD++  ++ +GGL    +V  A++ F  +   G  P+   YN I
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSI 492

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           + GLCKAQ+ + A D   +M+  G  P+ A+Y  LI G    G  ++A
Sbjct: 493 MMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEA 540



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 218/499 (43%), Gaps = 58/499 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR    +G  + A  +   ++  G  +  N SYN L+ A CKS     +E  L+ +   
Sbjct: 110 LIREFCKIGRTKNATRIMGILEESGAVIDAN-SYNVLINAYCKSGE---IEEALRVLDHT 165

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFN-EIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
               +  T   +L   C+ G+  +A+ V + ++    + D    ++L+ A  K   V +A
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +L   M     + +  T+ VLI GF K+ R+D+A+    K+   G  SD   +++I+  
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
           LC   +   A++L + M   G  P     + LI     +G L   L V E+         
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           +   N +++   +   ID+A   L+               +M+ +G   P+  +++I++ 
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLE---------------IMVSRGCY-PDIVTYNILLT 389

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L KDGK+D A+ +  +++  GC  ++  YN +IDGL    + E + ELL EM   G KP
Sbjct: 390 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 449

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T  S          VVG L+                         + GK  EA +F 
Sbjct: 450 DLITCTS----------VVGGLS-------------------------REGKVHEAIKFF 474

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             +   G  P+   Y++ + GL   ++  LA++   D+ A+GC P   +Y  +I G+   
Sbjct: 475 HYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYE 534

Query: 513 QRVAEAEDLFNEMITKGLI 531
               EA  L NE+ ++GL+
Sbjct: 535 GLAEEASKLSNELYSRGLV 553



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 183/403 (45%), Gaps = 52/403 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           + S+  R +    ++VL + + +S+C+        LI        V +A  LF++++ +G
Sbjct: 178 LCSLCDRGKLKQAMQVLDRQL-QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKG 236

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+  +YN L++  CK   +D   + LK++  YG   D  +   +L+  C+ G++  A
Sbjct: 237 -CKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDA 295

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           + +   ++  G     V F+IL+    + G + KA  ++E M       N ++F  LI G
Sbjct: 296 MKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 355

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           F  +  +D+A++  + M   G   D   Y++++  LCK+ +++ A+ + S++   G +P 
Sbjct: 356 FCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 415

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
                 LI+                            N+++  L+  G  + A  LL+  
Sbjct: 416 ------LISY---------------------------NTVIDGLLKVGKAELAVELLEE- 441

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                         M +KG + P+  +   ++  L ++GK+  A+  F  +   G   N 
Sbjct: 442 --------------MCYKG-LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNA 486

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           F+YN+++ GLC + +   + + L +M  +G KPT  +  ++ +
Sbjct: 487 FIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIK 529


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 244/531 (45%), Gaps = 27/531 (5%)

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFS 139
           SVDL    L+E+++ G+   +  L  LL  +   G  + +  VF +I   G      +++
Sbjct: 128 SVDL----LRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYN 183

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+ A  K   +D A    ++M   N   +  T+  LIHG  K   VD+AL+L  +M   
Sbjct: 184 ALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDK 243

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGEL 256
           G   +   Y ++I G C   +++ A  ++  MK SG+ P+   +  L+     C D  + 
Sbjct: 244 GHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKA 303

Query: 257 TLLVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
             L+ E     ++++     L C++++  L +N    +    L+ ++             
Sbjct: 304 LELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLG------------ 351

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
              +G   P  S F++++  L+K  +L     +F  + + G    +  Y  LI+ L  + 
Sbjct: 352 ---RGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNE 408

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
             EE   +  ++   G     F+ N +  C CR + +  A    R M+V+G  P +    
Sbjct: 409 WREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFN 468

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK G   +A + L  +++ G  PDI  +S+ + GL  IKR + ALE F ++   
Sbjct: 469 TLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEW 528

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+ V YNI+I  LC    VA +  L   M  +G+ P   +YN LI  +C+   +++A
Sbjct: 529 GINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKA 588

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
                 M  +   +PD  TY+  I+ L  +GR ++A  ++  ME  GC+P+
Sbjct: 589 KKLFDSM-SRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPD 638



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 236/540 (43%), Gaps = 64/540 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+   G +GL   +  +F Q+   GL  P    YN L++AL KS S+DL  ++ ++M   
Sbjct: 150 LLASWGRLGLANYSAHVFCQISFLGLS-PTTRLYNALIDALVKSNSIDLAYLKFQQMAAD 208

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
               D++T   L+   C  G  D+AL +  ++ D G + +   +++L+  F     VD+A
Sbjct: 209 NCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEA 268

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK------------------- 195
             + E M D  +  NE T   L+HG  +     KAL+L  +                   
Sbjct: 269 FGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDT 328

Query: 196 ---------------------MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
                                + + G+    ++++V++  L K  +L     ++  ++  
Sbjct: 329 VLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQ 388

Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--A 292
           G+         LI          +L K  W +          + +   L+S+G I    +
Sbjct: 389 GVKAGIGAYLALI---------EVLYKNEWREEG--------DRVYGQLISDGLISNVFS 431

Query: 293 YNLLQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           YN++        + D   E    M  +G V PN  +F+ +IN   KDG +D A  L   +
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVV-PNLVTFNTLINGHCKDGAIDKARKLLESL 490

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   ++F +++++DGLC   R EE+ E   EM E G  P     N + R LC   DV
Sbjct: 491 LENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDV 550

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             ++ L+R+M+ +G  P       LI+  C+  K  +A +    M + G  PD   YSA 
Sbjct: 551 ARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAF 610

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I  L +  R++ A ++F  + A+GC PD    N+II  L + + V EA+++      KG+
Sbjct: 611 IEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGI 670



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 193/399 (48%), Gaps = 22/399 (5%)

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
           T L N+++  LV + SID AY   Q M     +AD                  +++ +I+
Sbjct: 179 TRLYNALIDALVKSNSIDLAYLKFQQMAADNCVAD----------------RFTYNTLIH 222

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            + K G +D AL L R+M   G   NVF Y  LI+G C ++R++E++ +   M++SG  P
Sbjct: 223 GVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYP 282

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEA 448
              T+ ++   + R  D   AL L+ +   +  E    H  L    ++  L  +  A E 
Sbjct: 283 NEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEM 342

Query: 449 FRFLTDMV-QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
             FL  ++ + G+ P    ++  +  L+    +    ++F  +   G    + AY  +I 
Sbjct: 343 VVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIE 402

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            L K +   E + ++ ++I+ GLI +V +YN++IN +C++  +D A     R ++     
Sbjct: 403 VLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAF-RDMQVRGVV 461

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+++T+ TLI+G C  G  D A  L   + E G  P+  TF +++ GLC+  R   AL  
Sbjct: 462 PNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALEC 521

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F  M E G+ P+  ++  LI +  +  +   + ++L+ M
Sbjct: 522 FTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRM 560



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL P+   YN LI+   KS +ID A L   +M   ++   D  TY TLI G+C  G  D+
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQM-AADNCVADRFTYNTLIHGVCKVGVVDE 232

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A+ L  +M++KG  PN  T+  LI G C   R   A   F  MK+ G+ P+     AL+ 
Sbjct: 233 ALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292

Query: 649 AFLSELNPPLAFEVLKEM 666
                ++P  A E+L E 
Sbjct: 293 GVFRCVDPSKALELLSEF 310


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/655 (23%), Positives = 289/655 (44%), Gaps = 40/655 (6%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A+ +  LI CL   G++ EA     ++ +   C PN  SYN +++  CK+ +++    
Sbjct: 8   PNAILYNNLISCLCKAGMLAEAESYLKRMPQH--CAPNVVSYNIIIDGYCKARNIEKALA 65

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            L+EM++ G     +  + ++Q +C +G   KA+ VF E+   G   + V F++LL    
Sbjct: 66  FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 125

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           +  ++ +A EL   M+    + +  T+  +I G  K  ++D+A+ L ++M +   +    
Sbjct: 126 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 185

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y  +I  LCK  +L+ A +++ +M            S L       G+L +    ++ D
Sbjct: 186 TYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKL-VEASRVYSD 244

Query: 267 RDVNTMTLLCNSIMRILVSNGSID----QAYNLLQAMIKGEPIADV-------------- 308
                + +  N+   +++    +D    +A  L+  M+  +   D               
Sbjct: 245 MCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKAR 304

Query: 309 ----GVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                 EM    +G  +SP   +++ ++  LL   KL  A+ L   M   G + +   YN
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            +I G C +    E+Y L ++M + G     +T N M     + +    A  L ++M+  
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSG 424

Query: 424 GHE----PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
            ++    P +    +LI  LCK  +  EAF+ L+ M  +GF+P +  +   +  L    R
Sbjct: 425 KNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGR 484

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A EL++++    C   V + NI++ G+ +   V EA+D   +M   G++P   TY+ 
Sbjct: 485 LDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDK 544

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L+ G C  G  DQA   +  ++ ++   P+      L+  LC  G    A   +  +   
Sbjct: 545 LVVGLCWQGKADQARKLVEELV-RDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSV 603

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSEL 654
           G          L+T  C   +    L +  M++++   PD  V V  I  F +EL
Sbjct: 604 GVEVTLGMHNTLVTSCCLARK----LDYLDMIEQREGVPD--VIVERIEKFRAEL 652



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 231/535 (43%), Gaps = 56/535 (10%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           +++ L+    K G + +A   ++RM   +   N  ++ ++I G+ K   ++KAL    +M
Sbjct: 12  LYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREM 70

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            + G       Y  I+   CK   +  A+ +++EM   G  P             D    
Sbjct: 71  EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEP-------------DIVNF 117

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            +L+  +W  R ++        + R + S G                             
Sbjct: 118 NVLLSGLWRARKIHE----ARELFRSMNSRG----------------------------- 144

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++ +I  L K  KLD A+ L   M Q         Y  LID LC   RL+
Sbjct: 145 ---CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQ 201

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++YE+  +M E     T    + +F  L R   +V A  +   M  +         +L++
Sbjct: 202 QAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVV 261

Query: 437 KELCK-HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
             L K  G  +EA + +T+M+ +   PD   YS  I GL   +R   A E+F+++   G 
Sbjct: 262 LGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGI 321

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P VV YN ++ GL    ++ +A +L   M+ +G +P   +YNL+I G+C +G+ ++A  
Sbjct: 322 SPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEA-Y 380

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME----EKGCAPNRITFMAL 611
           CL + + K+    +  TY  +I G         A ML+  M+    +K  APN  T+  L
Sbjct: 381 CLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEIL 440

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I+ LCK D+   A      M++KG  P + ++  L+S          AFE+ KEM
Sbjct: 441 ISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 495



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 5/319 (1%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M + G   N  LYNNLI  LC +  L E+   L+ M +    P   + N +    C+ ++
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  AL  +R+M   GH P     + +++  CK G   +A     +M  +G  PDIV ++ 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            + GL   +++  A ELFR + + GC PDVV YN +I+GLCK +++ EA  L   M  + 
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           + P+  TY  LI+  CK   + QA     +M E      +   Y+ L + L  AG+  +A
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEP-AYSVLFNKLQRAGKLVEA 238

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCD--RPRAALVHFRMMKEKGMKPDMFVFVALI 647
             ++++M  K       T+  ++ GL K D     AA +   MM +K + PD + +  LI
Sbjct: 239 SRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKK-IAPDFYAYSILI 297

Query: 648 SAFLSELNPPLAFEVLKEM 666
           +       P  A E+ +EM
Sbjct: 298 NGLCKARRPGEAKEMFQEM 316


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 22/550 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +++ Y   G    A   F  +   G     HV+S L+ A++   ++++A   + +M +  
Sbjct: 290 MVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 349

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I +   T+ +++ GF K    D A   F++  +   + +A +Y  II   C+   ++ A 
Sbjct: 350 IEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAE 409

Query: 226 QLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            L  EM+  GI    +I   ++   T   +E +  ++   + E          C      
Sbjct: 410 ALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKE----------CG-FFPS 458

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           ++S G +   Y  +  + K      + +  +M   G +  N  ++ ++IN  LK      
Sbjct: 459 VISYGCLINLYTKVGKVSKA-----LEISKMMKMSG-IKHNMKTYSMLINGFLKLKDWAN 512

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A S+F + T+ G   +V LYNN+I   C    ++ +  ++R+M++   +PT  T   +  
Sbjct: 513 AFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIH 572

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
              R  ++  AL +   MR  G  P V     LI  L +  +  +A   L +M   G  P
Sbjct: 573 GFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGP 632

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   Y+  + G   +   + A + F  +   G   DV  Y  ++   CK+ R+  A  + 
Sbjct: 633 NEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 692

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM  K +  +   YN+LI+GW + G++ +A   + +M  KE   PD+ TYT+ I+  C 
Sbjct: 693 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM-RKEGLLPDIHTYTSFINACCK 751

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG    A  +  EME  G  PN  T+  LI G  +   P  AL  F  MK  G KPD  V
Sbjct: 752 AGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAV 811

Query: 643 FVALISAFLS 652
           +  L+++ LS
Sbjct: 812 YHCLVTSLLS 821



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/538 (22%), Positives = 226/538 (42%), Gaps = 33/538 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           + +++  + + G++  A +  E M    I  +   +  LIH +     +++AL    KM 
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS----CS-D 252
           + G       Y +I+GG  K    + A   + E K    + +  I   +I +    C+ D
Sbjct: 347 EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             E   LV+E+ E                       ID   ++   M+ G  +     + 
Sbjct: 407 RAEA--LVREMEEQ---------------------GIDAPIDIYHTMMDGYTMIGNEEKC 443

Query: 313 LMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           L++F         P+  S+  +IN   K GK+  AL + + M   G   N+  Y+ LI+G
Sbjct: 444 LIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLING 503

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                    ++ +  +  + G KP     N++    C   ++  A+ +VR+M+ + H P 
Sbjct: 504 FLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPT 563

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            +    +I    + G+   A      M + G +P +  Y+A I GL++ +++  A+ +  
Sbjct: 564 TRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILD 623

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++   G  P+   Y  ++ G        +A   F  +  +GL   V TY  L+   CKSG
Sbjct: 624 EMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSG 683

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + Q+ L +++ +  ++   +   Y  LIDG    G   +A  L  +M ++G  P+  T+
Sbjct: 684 RM-QSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTY 742

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + I   CK    + A    + M+  G+KP++  +  LI+ +     P  A    +EM
Sbjct: 743 TSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEM 800



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 208/486 (42%), Gaps = 20/486 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++     +G  + A+  F++ K E L   N   Y  ++ A C+ C++D  E  ++EM++ 
Sbjct: 360 IVGGFAKMGNADAADHWFEEAK-EKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQ 418

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G          ++  Y   G  +K L VF+ + + G+    + +  L+  ++K G+V KA
Sbjct: 419 GIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKA 478

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E+ + M    I+ N KT+ +LI+GF+K      A  +F+  TK G   D  +Y+ II  
Sbjct: 479 LEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITA 538

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
            C    ++ A+ +  +M+     P       +I   +  GE+   L + ++         
Sbjct: 539 FCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPT 598

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N+++  LV    + +A  +L  M     +A VG            PN  ++  ++ 
Sbjct: 599 VHTYNALILGLVEKRQMTKAVAILDEM----NVAGVG------------PNEHTYTTLMQ 642

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
                G  + A   F  +   G   +V+ Y  L+   C S R++ +  + +EM       
Sbjct: 643 GYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPR 702

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             F  N +     RR DV  A +L+++MR +G  P +   T  I   CK G   +A   +
Sbjct: 703 NTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEII 762

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G  P++  Y+  I G       + AL  F ++   G  PD   Y+ +++ L   
Sbjct: 763 QEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSR 822

Query: 513 QRVAEA 518
              A++
Sbjct: 823 ATFAQS 828



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 152/359 (42%), Gaps = 9/359 (2%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ++  F+    P    + +++    + G +  A   F  M   G   +  +Y++LI     
Sbjct: 272 VVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAV 331

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +EE+   +R+M+E G + T  T + +     +  +   A +   + +    E     
Sbjct: 332 GRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAK----EKLPSL 387

Query: 432 NTLL----IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
           N ++    I   C+      A   + +M ++G    I  Y   + G   I   +  L +F
Sbjct: 388 NAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVF 447

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
             +   G  P V++Y  +I+   K  +V++A ++   M   G+  ++ TY++LING+ K 
Sbjct: 448 DRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKL 507

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
            +   A         K+   PDV+ Y  +I   C  G  D AI +  +M+++   P   T
Sbjct: 508 KDWANAFSVFED-FTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRT 566

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           F+ +I G  +    R AL  F MM+  G  P +  + ALI   + +     A  +L EM
Sbjct: 567 FLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEM 625


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 196/449 (43%), Gaps = 54/449 (12%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           TF +++       +  +AL+L  +M +     +A  Y+ +I G C   +++ AL +  EM
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 211

Query: 232 K-GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   GI P+      +I+               W           C          G +D
Sbjct: 212 RERGGIAPNQYTYGTVISG--------------W-----------CKV--------GRVD 238

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
           +A  +   M+                KG V P    ++ +I      GKLD AL     M
Sbjct: 239 EAVKVFDEMLT---------------KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 283

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G    V  YN L+  L    R  E+YEL+ EM   G     FT N +    C+  +V
Sbjct: 284 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNV 343

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             AL +   M  +G    V   T LI  L K G+  E  +   + V+ G  PD+V Y+A 
Sbjct: 344 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 403

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +D A E+  ++      PD V YN ++ GLC   RV EA  L +EM  +G+
Sbjct: 404 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 463

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + TYN LI+G+   G++  A+   + M+ K   +P ++TY  LI GLC  G+ DDA 
Sbjct: 464 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAE 522

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +  EM E G  P+  T+++LI GL   D
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGLTTED 551



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 204/446 (45%), Gaps = 27/446 (6%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           +L+LYS MK   +      L  L+++        L          + T T   N ++R L
Sbjct: 107 SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTF--NIMLRHL 164

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
            S G   +A  LL+ M +                    PN  +++ +I      G++  A
Sbjct: 165 CSAGKPARALELLRQMPR--------------------PNAVTYNTVIAGFCSRGRVQAA 204

Query: 344 LSLFREMTQIGCM-QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMF 401
           L + REM + G +  N + Y  +I G C   R++E+ ++  EM   G  KP     N++ 
Sbjct: 205 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 264

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C +  +  AL    +M  +G    V    LL+  L   G+  EA+  + +M  +G  
Sbjct: 265 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLA 324

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
            D+  Y+  I G      V  ALE+F ++   G    VV Y  +I  L K  +V E + L
Sbjct: 325 LDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 384

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F+E + +G+ P +  YN LIN    SGNID+A   +  M EK+  +PD +TY TL+ GLC
Sbjct: 385 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLC 443

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRPRAALVHFRMMKEKGMKPDM 640
           + GR D+A  L +EM ++G  P+ +T+  LI+G   K D   A  +   MM  KG  P +
Sbjct: 444 LLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN-KGFNPTL 502

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             + ALI           A  ++KEM
Sbjct: 503 LTYNALIQGLCKNGQGDDAENMVKEM 528



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 197/421 (46%), Gaps = 26/421 (6%)

Query: 12  APLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNC 71
           AP   L  D+ + R  +       ++R L S G    A  L  Q+ R     PN  +YN 
Sbjct: 136 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNT 190

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
           ++   C    V      ++EM++ G    ++YT   ++  +C  G+ D+A+ VF+E++  
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 250

Query: 131 GWVDEH--VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
           G V     +++ L+  +   G++D A    +RM +  + +   T+ +L+H      R  +
Sbjct: 251 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 310

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A +L ++M   G A D   Y+++I G CK   ++ AL+++  M   G+       + LI 
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           + S +G++    K   E   R +    +L N+++    ++G+ID+A+ ++  M K     
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR--- 427

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++P+  +++ ++  L   G++D A  L  EMT+ G   ++  YN LI
Sbjct: 428 -------------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
            G      ++++  +  EM   GF PT  T N++ + LC+      A N+V++M   G  
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534

Query: 427 P 427
           P
Sbjct: 535 P 535



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 58/410 (14%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPG--ALGFLIRCLGSVGLVEEANMLFDQVKR 58
           +A   SR R  A L ++ +  ++ R  ++P     G +I     VG V+EA  +FD++  
Sbjct: 192 IAGFCSRGRVQAALDIMRE--MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 249

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           +G   P    YN L+                                     YC+ G+ D
Sbjct: 250 KGEVKPEAVMYNALIGG-----------------------------------YCDQGKLD 274

Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            AL   + +++ G  +    +++L+ A    G   +A EL+E M    + L+  T+ +LI
Sbjct: 275 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILI 334

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           +G  K+  V KAL++F+ M++ G  +    Y  +I  L K  Q++   +L+ E    GI 
Sbjct: 335 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 394

Query: 238 PDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           PD  + + LI S S  G +     +    E + +    +  N++MR L   G +D+A  L
Sbjct: 395 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 454

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           +  M K               +G + P+  +++ +I+     G +  AL +  EM   G 
Sbjct: 455 IDEMTK---------------RG-IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
              +  YN LI GLC + + +++  +++EM E+G  P   T  S+   L 
Sbjct: 499 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 2/213 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V++A  +F+ + R G+      +Y  L+ AL K   V   +    E    G   D   
Sbjct: 341 GNVKKALEIFENMSRRGVRA-TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  +  SG  D+A  +  E+       D+  ++ L+      G VD+A +LI+ M 
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              I+ +  T+  LI G+  K  V  AL++ ++M   GF      Y+ +I GLCKN Q +
Sbjct: 460 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 519

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            A  +  EM  +GITPD      LI   + E E
Sbjct: 520 DAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552


>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
 gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
          Length = 442

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 181/380 (47%), Gaps = 38/380 (10%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +F ++I  L K GKL+ A  +F+EM + G   ++ +Y +L+DGL  ++ ++E+ +L
Sbjct: 42  PDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKL 101

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L+E+   G KPT  T  S    LC+   V  A  LVR+M   G     +    +      
Sbjct: 102 LQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM---GKMCAAEVLHCIFGGYVL 158

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  EA     +MV++G   D+ CY+  I GL  ++R D A E+F  +   G  PD   
Sbjct: 159 EGKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRT 218

Query: 502 YNIIISGLCK-----------------------------------AQRVAEAEDLFNEMI 526
           Y +I+S  CK                                     R  EA ++++ M+
Sbjct: 219 YGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTML 278

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            K ++PS+ TYN+L+ G CK G    A L L  M E++   P +++Y TLI GL  AGR 
Sbjct: 279 RKMVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRA 338

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D+AI ++ EM + G  P+  +  +LI  L   DR   A    R M   G+ PD   + AL
Sbjct: 339 DEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNAL 398

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           +           A++VL EM
Sbjct: 399 VKVLCGGAKVGPAWDVLVEM 418



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 203/444 (45%), Gaps = 23/444 (5%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T ++     + + D+A++ F  ++      D   F++++    K G++++ACE+ + M+ 
Sbjct: 13  TAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNR 72

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
              + +   +  L+ G  K S +D+A +L  ++   G       Y   I GLCKN ++E 
Sbjct: 73  KGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEE 132

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMR 281
           A +L  EM   G     E+L  +      EG++   L +K+    + V        +++ 
Sbjct: 133 AGKLVREM---GKMCAAEVLHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLIH 189

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L      D+A  + +AM++               +G V P+T ++ +I++   K GK+ 
Sbjct: 190 GLFYVRRNDEAQEMFEAMVQ---------------QGYV-PDTRTYGMIVSHFCKQGKMQ 233

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  +   M   G   N  +YN+L+DG    NR  E+  +   M      P+  T N + 
Sbjct: 234 AACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILM 293

Query: 402 RCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
             LC+      A  ++R+MR + G  P +     LI  L K G+A EA    T+MV  G 
Sbjct: 294 LGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGV 353

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +PD    ++ I  L    R+D A +L RD+   G  PD +AYN ++  LC   +V  A D
Sbjct: 354 VPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWD 413

Query: 521 LFNEMITKGLIPSVATYNLLINGW 544
           +  EM+    +P  +T+  +  G+
Sbjct: 414 VLVEMMDNSCVPDGSTFRAMKLGF 437



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 199/449 (44%), Gaps = 27/449 (6%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
            +  +I+   K  R D+A+  F++M       D   + V+I GLCK  +L  A +++ EM
Sbjct: 11  AYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEM 70

Query: 232 KGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
              G  PD  + + L+   S      E   L++EI   R +    +   S +  L  NG 
Sbjct: 71  NRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVS-RGMKPTEVTYTSFISGLCKNGR 129

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLM-IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           +++A  L++ M K         E+L  IF G V                +GK++ AL+L 
Sbjct: 130 VEEAGKLVREMGKM-----CAAEVLHCIFGGYVL---------------EGKIEEALALK 169

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM + G   +V  Y NLI GL    R +E+ E+   M + G+ P   T   +    C++
Sbjct: 170 DEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQ 229

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             +  A  +V  M   G E        L+       +A EA      M+++  +P IV Y
Sbjct: 230 GKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTY 289

Query: 468 SAAIGGLIDIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +  + GL  + +   A  + R++    G  P +V+Y  +I GL KA R  EA D+F EM+
Sbjct: 290 NILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMV 349

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G++P   +   LI     +  +D+A   L R + +   +PD + Y  L+  LC   + 
Sbjct: 350 DNGVVPDCPSCTSLIQALAMADRMDEATQLL-RDMPRMGITPDALAYNALVKVLCGGAKV 408

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGL 615
             A  +  EM +  C P+  TF A+  G 
Sbjct: 409 GPAWDVLVEMMDNSCVPDGSTFRAMKLGF 437



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 180/412 (43%), Gaps = 23/412 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+  ++  ++  LCK+  ++      +EM   GW  D    T L+     +   D+A 
Sbjct: 40  CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEAR 99

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +  EI+  G     V ++  +    K G V++A +L+  M    +   E   C+   G+
Sbjct: 100 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMG--KMCAAEVLHCIF-GGY 156

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           V + ++++AL L D+M K G   D   Y  +I GL   ++ + A +++  M   G  PD 
Sbjct: 157 VLEGKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDT 216

Query: 241 EILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                +++    +G++    K  EI +   +     + NS+M   +      +A N+   
Sbjct: 217 RTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDT 276

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-GCMQ 357
           M++         +M+M       P+  +++I++  L K G+   A  + REM +  G + 
Sbjct: 277 MLR---------KMVM-------PSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVP 320

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
            +  Y  LI GL  + R +E+ ++  EM ++G  P   +  S+ + L     +  A  L+
Sbjct: 321 TIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLL 380

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           R M   G  P       L+K LC   K   A+  L +M+    +PD   + A
Sbjct: 381 RDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRA 432



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           +N++F+    R D   A+    +M  +  +P ++  T++I  LCK GK   A     +M 
Sbjct: 16  INALFKA--HRPD--QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMN 71

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           ++G+ PDI+ Y++ + GL     +D A +L ++I + G  P  V Y   ISGLCK  RV 
Sbjct: 72  RKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVE 131

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           EA  L  EM   G + +    + +  G+   G I++A L L   + K+  + DV  YT L
Sbjct: 132 EAGKLVREM---GKMCAAEVLHCIFGGYVLEGKIEEA-LALKDEMVKKGVTLDVRCYTNL 187

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I GL    R D+A  ++  M ++G  P+  T+  +++  CK  + +AA     +M   G+
Sbjct: 188 IHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGL 247

Query: 637 KPDMFVFVALISAFLS 652
           + +  ++ +L+  FL 
Sbjct: 248 EANCHIYNSLMDGFLG 263



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 33/235 (14%)

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           +V Y+A I  L    R D A+  F  + A  C PD+  + ++I+GLCKA ++  A ++F 
Sbjct: 9   VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQ 68

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC-- 581
           EM  KG  P +  Y  L++G  K+  +D+A   L  ++ +    P  +TYT+ I GLC  
Sbjct: 69  EMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSR-GMKPTEVTYTSFISGLCKN 127

Query: 582 ------------------------------IAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
                                         + G+ ++A+ L +EM +KG   +   +  L
Sbjct: 128 GRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNL 187

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GL    R   A   F  M ++G  PD   +  ++S F  +     A +V++ M
Sbjct: 188 IHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIM 242



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%)

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           SGS  V+ YT +I+ L  A RPD AI  +  M  + C P+  TF  +ITGLCK  +   A
Sbjct: 4   SGSQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRA 63

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAF 650
              F+ M  KG KPD+ V+ +L+   
Sbjct: 64  CEVFQEMNRKGWKPDIIVYTSLVDGL 89



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 41/207 (19%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           GFL      V    EA  ++D + R+ + +P+  +YN L+  LCK        + L+EM+
Sbjct: 260 GFL-----GVNRAREAINVYDTMLRK-MVMPSIVTYNILMLGLCKLGQTADARLVLREMR 313

Query: 94  DY-GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVD 152
           +  G      +   L+     +G+ D+A+ VF E++D+G V                   
Sbjct: 314 ERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVV------------------- 354

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
                     DC       +   LI       R+D+A QL   M + G   DA  Y+ ++
Sbjct: 355 ---------PDC------PSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 399

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPD 239
             LC   ++  A  +  EM  +   PD
Sbjct: 400 KVLCGGAKVGPAWDVLVEMMDNSCVPD 426


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 172/652 (26%), Positives = 290/652 (44%), Gaps = 60/652 (9%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKR 58
           M S++  ++    L V  Q     R  +SP    +  +I+ L   G +EEA  +  +++ 
Sbjct: 205 MNSLIKNSKLDMALAVYKQ---LKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEE 261

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
            G+  P  ++Y   +E LC +   DL    L+  +      D Y  T  ++ +CN  +FD
Sbjct: 262 SGI-TPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFD 320

Query: 119 KALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
           KA SV  ++   G V D H ++ L+  F K G + KA   +  M    +++N      ++
Sbjct: 321 KAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSIL 380

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
           H   +     + +  F++    G   D   Y+ ++  LCK  +LE A+ L  EMK   I 
Sbjct: 381 HCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQIN 440

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVSNGSIDQ 291
            D    + LI     +G +    K   E R      DV T  +L +   R    NG   +
Sbjct: 441 MDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCR----NGLATE 496

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A NLL  M   +                + PN+ ++++++ +L   GK+  A ++F  + 
Sbjct: 497 ALNLLDYMQTQK----------------LKPNSITYNVVVESLCMGGKVKEAEAVFNSIE 540

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
               + N F    +I+G C +N    + +L   +   G        N + + LC   D  
Sbjct: 541 D-KSLDNYFA---MINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDND 595

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA--MEAFRFLTDMV-QEGFLPDIVCYS 468
           G L L+  M     EP       L   LC+ G A  M   + + DM+ + G+ PD++ Y+
Sbjct: 596 GILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYT 655

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA--QRVAEA-------E 519
             I     +  +  A++LF D+   G  PD+V + +++ G  KA  ++V  A       E
Sbjct: 656 IMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNE 715

Query: 520 DLFN------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           D+F+      EM    + P V  Y +LI+G+CK  ++  A+     M+E+    PD+ITY
Sbjct: 716 DIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIER-GLEPDIITY 774

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK---CDRPR 622
           T L+ G C  G  D A+ L ++M  KG +P+  T  AL+ G+ K   C  P+
Sbjct: 775 TALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQCSAPQ 826



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 160/698 (22%), Positives = 286/698 (40%), Gaps = 105/698 (15%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           D  K   FMS      L++   SVG+ ++A ++LF   +R    VP+ +  N L+ +L K
Sbjct: 154 DSKKQSLFMSK-VYDALVKAYVSVGMFDDAIDVLFQMGRRR--FVPHIFICNFLMNSLIK 210

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
           +  +D+     K+++  G   + YT   +++  C +G  ++A+ V  E+ + G       
Sbjct: 211 NSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESG------- 263

Query: 139 SILLVAFSKWGEVDKAC---------ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            I    F+    ++  C         ++++     NI L+   + V + GF  + + DKA
Sbjct: 264 -ITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKA 322

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             +   M K G   D   Y  +I   CK   L  A    +EM   G+  +  I+  ++  
Sbjct: 323 ESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHC 382

Query: 250 CSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
             + G  + +V +  + + +      +  N+++  L   G +++A  LL  M   +   D
Sbjct: 383 LCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMD 442

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
           V                  +  +IN     G +  A  +F EM + G   +V  Y+ L+ 
Sbjct: 443 V----------------MHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVS 486

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLN----------------------------- 398
           G C +    E+  LL  M+    KP   T N                             
Sbjct: 487 GFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDN 546

Query: 399 --SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL--LIKELCKHGKAMEAFRFLTD 454
             +M    C+     GA  L  ++ V+GH   VK +    L+K LC+ G        L  
Sbjct: 547 YFAMINGYCKANHTAGAAKLFFRLSVKGH---VKRSCCYNLLKNLCEEGDNDGILMLLET 603

Query: 455 MVQEGFLPDIVCYSAAI------GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
           M+     P    Y          GG   +++   A  +F  +   G  PD++AY I+I+ 
Sbjct: 604 MLNLNVEPSKFIYGKLFTSLCRAGGAAGMRK---AQSVFDMLLKRGWTPDLIAYTIMITS 660

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            C+   + EA DLF++M  +G+ P + T+ +L++G  K+ +I +    +      + G+ 
Sbjct: 661 YCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKA-HIKK----VYSAANAKGGNE 715

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           D+                 DA+ +W EM++    P+ I +  LI G CK D    A+  F
Sbjct: 716 DIF----------------DALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVF 759

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             M E+G++PD+  + AL+S      +   A  +L +M
Sbjct: 760 DEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQM 797



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 226/479 (47%), Gaps = 45/479 (9%)

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK---NKQLE-MALQLYSEMKGSGITP 238
           K++   AL  F+++  SGF  D + Y  II  LC    +KQL  + L +         TP
Sbjct: 77  KNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTP 136

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            FEI S  + + SD         ++   +    M+ + +++++  VS G  D A ++L  
Sbjct: 137 -FEI-SHFLDTLSDG------FVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQ 188

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M +   +                P+    + ++N+L+K+ KLD+AL++++++ ++G   N
Sbjct: 189 MGRRRFV----------------PHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPN 232

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
            + Y  +I  LC +  LEE+  +++EMEESG  PT F   +    LC        +N + 
Sbjct: 233 DYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLC--------VNEMS 284

Query: 419 KMRVQGHEPWVKHN--------TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            +  Q  + W   N        T+ ++  C   K  +A   L DM +EG +PD+ CY+A 
Sbjct: 285 DLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTAL 344

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +  A     ++ + G   + V    I+  LC+    +E  D FN+  + GL
Sbjct: 345 ICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGL 404

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
                +YN +++  CK G +++A+  L  M  K+  + DV+ YTTLI+G C  G   DA 
Sbjct: 405 FLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQI-NMDVMHYTTLINGYCCQGNVVDAF 463

Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            ++ EM E G   + +T+  L++G C+      AL     M+ + +KP+   +  ++ +
Sbjct: 464 KVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVES 522



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 150/619 (24%), Positives = 266/619 (42%), Gaps = 68/619 (10%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII-------------------- 128
             +++D G+ +D  T   ++++ C  G   +  S+F +II                    
Sbjct: 87  FNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISHFLDTL 146

Query: 129 DHGWVD----------EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC--VL 176
             G+VD            V+  L+ A+   G  D A +++ +M     R     F    L
Sbjct: 147 SDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMG--RRRFVPHIFICNFL 204

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           ++  +K S++D AL ++ ++ + G + +   Y ++I  LC N  LE A+ +  EM+ SGI
Sbjct: 205 MNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGI 264

Query: 237 TPD-FEILSKLITSCSDE-GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
           TP  F   + +   C +E  +L   V + W+  ++          +R   +    D+A +
Sbjct: 265 TPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAES 324

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG-KLDLAL--------- 344
           +L+ M K   + D+     +I +   + N       +N ++  G K++  +         
Sbjct: 325 VLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLC 384

Query: 345 ---------SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE--MEESGFKPT 393
                      F +   +G   +   YNN++D LC   +LEE+  LL E  M++      
Sbjct: 385 ELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVM 444

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
           H+T  ++    C + +VV A  +  +MR  G E  V    +L+   C++G A EA   L 
Sbjct: 445 HYT--TLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLD 502

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M  +   P+ + Y+  +  L    +V  A  +F  I        +  Y  +I+G CKA 
Sbjct: 503 YMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKS----LDNYFAMINGYCKAN 558

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
             A A  LF  +  KG +     YNLL N  C+ G+ D  ++ L  ML      P    Y
Sbjct: 559 HTAGAAKLFFRLSVKGHVKRSCCYNLLKN-LCEEGDNDGILMLLETMLNLNV-EPSKFIY 616

Query: 574 TTLIDGLCIAGRP---DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
             L   LC AG       A  +++ + ++G  P+ I +  +IT  C+ +  + A+  F  
Sbjct: 617 GKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHD 676

Query: 631 MKEKGMKPDMFVFVALISA 649
           MK++G+KPD+  F  L+  
Sbjct: 677 MKQRGIKPDLVTFTVLLDG 695



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 11/223 (4%)

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           + + A  F   +   GF  DI  Y+A I  L           +F DI    C  +   + 
Sbjct: 79  QPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFE 138

Query: 504 IIISGLCKAQRVAEAEDLFNEMITK--GLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           I       +  +    D F ++ +K   L  S   Y+ L+  +   G  D A+  L +M 
Sbjct: 139 I-------SHFLDTLSDGFVDVDSKKQSLFMS-KVYDALVKAYVSVGMFDDAIDVLFQM- 189

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            +    P +     L++ L    + D A+ ++ +++  G +PN  T+  +I  LC     
Sbjct: 190 GRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSL 249

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             A+   + M+E G+ P  F + A I          L ++VL+
Sbjct: 250 EEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQ 292


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 182/347 (52%), Gaps = 1/347 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+ N  + +I+IN+L +   +  A+S+  +M ++G   +   +  LI+GLCN  R++E+ 
Sbjct: 117 VAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAV 176

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
           EL  EM      P   T   +   LC++  V  A  +   M  +G EP +     L+   
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C   +  +A +    MV +G  P +  YS  I G    +R+D A  L   +      P+ 
Sbjct: 237 CLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNT 296

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN ++ GLC A  + EA++LF +M + G++P++ TY++L++G CK G++++A+  L+ 
Sbjct: 297 VTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTS 356

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M E++   PD++ Y  LI G+ IAG+ + A  L++++   G  P+  T+  +I GL K  
Sbjct: 357 MQERKL-EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEG 415

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A   FR M++ G  PD   +  +I  FL   +P  A +++ EM
Sbjct: 416 LSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 203/430 (47%), Gaps = 19/430 (4%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A     RM   N R +       +    KK +    + L ++M   G A +    ++
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRD 268
           +I  LC+   +  A+ + S+M   GI PD    + LI    +EG +   V+   E   RD
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
               T+    ++ +L   G + +A  + + M       + GVE          PN  +++
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETM------TEKGVE----------PNIYTYN 230

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            ++N      +++ A  +F  M   GC  +V  Y+ LI+G C S R++E+  LL +M E 
Sbjct: 231 ALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEK 290

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P   T N++ + LC    ++ A  L +KM   G  P ++  ++L+  LCKHG   EA
Sbjct: 291 ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEA 350

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
            + LT M +    PDIV Y+  I G+    ++++A ELF  + A+G  P V  YNI+I G
Sbjct: 351 LKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKG 410

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           L K     EA  LF +M   G +P   +YN++I G+ ++ +   A+  +  M+ +   S 
Sbjct: 411 LLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF-SA 469

Query: 569 DVITYTTLID 578
           D  T+  L+D
Sbjct: 470 DSSTFKMLLD 479



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 179/372 (48%), Gaps = 4/372 (1%)

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEML 313
           EL   +  I + +  +T+  LCN +    V++   D   N+L  ++ +   I      + 
Sbjct: 88  ELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHN--DYTLNILINSLCRLSHIHFAVSVLS 145

Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
            +FK  + P++ +F  +IN L  +G++  A+ LF EM     M N   +  L+D LC   
Sbjct: 146 KMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG 205

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            + E+  +   M E G +P  +T N++    C R ++  A  +   M  +G  P V   +
Sbjct: 206 MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYS 265

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           +LI   CK  +  EA   LT M ++  +P+ V Y+  + GL     +  A ELF+ +C+ 
Sbjct: 266 ILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS 325

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P++  Y+I++ GLCK   + EA  L   M  + L P +  YN+LI G   +G ++ A
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
               S++       P V TY  +I GL   G  D+A  L+ +ME+ G  P+  ++  +I 
Sbjct: 386 KELFSKLF-ANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQ 444

Query: 614 GLCKCDRPRAAL 625
           G  +   P  A+
Sbjct: 445 GFLQNQDPSTAI 456



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 172/417 (41%), Gaps = 50/417 (11%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWG 149
           +M  +G  ++ YTL  L+   C       A+SV +++   G   D   F+ L+      G
Sbjct: 111 QMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEG 170

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            + +A EL   M   +   N  TF +L+    KK  V +A  +F+ MT+ G   +   Y+
Sbjct: 171 RIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYN 230

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            ++ G C   ++  A +++  M G G  P     S LI                      
Sbjct: 231 ALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILING-------------------- 270

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
                 C S          ID+A  LL  M + E I                PNT +++ 
Sbjct: 271 -----YCKS--------RRIDEAKALLTQMSEKELI----------------PNTVTYNT 301

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++  L     L  A  LF++M   G + N+  Y+ L+DGLC    LEE+ +LL  M+E  
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +P     N + + +     +  A  L  K+   G  P V+   ++IK L K G + EA+
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           +    M  +GFLPD   Y+  I G +  +    A++L  ++       D   + +++
Sbjct: 422 KLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 174/364 (47%), Gaps = 29/364 (7%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N+Y+ N L+ +LC+   +      L +M   G   D  T T L+   CN G+  +A+ +F
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           NE+     +   V F+IL+    K G V +A  + E M +  +  N  T+  L++G+  +
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             ++ A ++F+ M   G A     Y ++I G CK+++++ A  L ++M    + P+    
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 244 SKLITSCSDEGELTLLVKEIWED-------RDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
           + L+        L L  +E+++         ++ T ++L +     L  +G +++A  LL
Sbjct: 300 NTLMQGLCHASSL-LEAQELFKKMCSSGMLPNLRTYSILLDG----LCKHGHLEEALKLL 354

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
            +M + +                + P+   ++I+I  +   GKL++A  LF ++   G  
Sbjct: 355 TSMQERK----------------LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIR 398

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +V  YN +I GL      +E+Y+L R+ME+ GF P   + N + +   + QD   A+ L
Sbjct: 399 PSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQL 458

Query: 417 VRKM 420
           + +M
Sbjct: 459 IDEM 462



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 24/329 (7%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P ++ F  LI  L + G ++EA  LF+++      +PN  ++  L++ LCK   V   
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD-AMPNTVTFTILVDVLCKKGMVSEA 210

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVA 144
               + M + G   + YT   L+  YC   + + A  VF  ++  G     H +SIL+  
Sbjct: 211 RCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILING 270

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           + K   +D+A  L+ +M +  +  N  T+  L+ G    S + +A +LF KM  SG   +
Sbjct: 271 YCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPN 330

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y +++ GLCK+  LE AL+L + M+   + PD  + + LI      G+L  + KE++
Sbjct: 331 LRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE-VAKELF 389

Query: 265 EDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                N +       N +++ L+  G  D+AY L + M       D G            
Sbjct: 390 SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM------EDDG----------FL 433

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREM 350
           P++ S+++II   L++     A+ L  EM
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 1/171 (0%)

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +D A+  F  +      P  V     +  + K ++ +    L N+M   G+  +  T N+
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LIN  C+  +I  A+  LS+M  K    PD +T+TTLI+GLC  GR  +A+ L+NEM  +
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMF-KLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              PN +TF  L+  LCK      A   F  M EKG++P+++ + AL++ +
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 2/225 (0%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  L  Q+  + L +PN  +YN L++ LC + S+   +   K+M   G   +  T +
Sbjct: 277 IDEAKALLTQMSEKEL-IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYS 335

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDC 164
            LL   C  G  ++AL +   + +     + V ++IL+      G+++ A EL  ++   
Sbjct: 336 ILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN 395

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            IR + +T+ ++I G +K+   D+A +LF KM   GF  D+  Y+VII G  +N+    A
Sbjct: 396 GIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTA 455

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           +QL  EM G   + D      L+   S +  ++  ++E  + R +
Sbjct: 456 IQLIDEMVGRRFSADSSTFKMLLDLESHDEIISRFMRESSQIRKM 500


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 168/329 (51%), Gaps = 4/329 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   +IN   +  ++  A+ L  +M ++G   +V +YN +IDG C    + ++ EL
Sbjct: 78  PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 137

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              ME  G +    T NS+   LC       A  L+R M ++   P V   T +I    K
Sbjct: 138 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 197

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  EA +   +M +    PD+  Y++ I GL    RVD A ++   +   GC PDVV 
Sbjct: 198 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 257

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CK++RV E   LF EM  +GL+    TYN +I G+ ++G  D A    SRM 
Sbjct: 258 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM- 316

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P++ TY+ L+ GLC+  R + A++L+  M++     +  T+  +I G+CK    
Sbjct: 317 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A   FR +  KG+KPD+  +  +IS F
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGF 402



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 186/342 (54%), Gaps = 6/342 (1%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S++I+IN L +  +  +ALS+  +M + G   +V   ++LI+G C  NR+ ++ +L+ +M
Sbjct: 47  SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 106

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGK 444
           EE GF+P     N++    C+   V  A+ L  +M   G     V +N+L +  LC  G+
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL-VAGLCCSGR 165

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A R + DMV    +P+++ ++A I   +   +   A++L+ ++      PDV  YN 
Sbjct: 166 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 225

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+GLC   RV EA+ + + M+TKG +P V TYN LING+CKS  +D+    L R + + 
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK-LFREMAQR 284

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
               D ITY T+I G   AGRPD A  +++ M+ +   PN  T+  L+ GLC   R   A
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKA 341

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LV F  M++  ++ D+  +  +I       N   A+++ + +
Sbjct: 342 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 383



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 210/466 (45%), Gaps = 53/466 (11%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  ++    K    D  + LF  M   G   D   Y+++I  LC+  +  +AL +  +M 
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
             G  P                             DV T++ L N           +  A
Sbjct: 73  KFGYEP-----------------------------DVVTVSSLING----FCQGNRVFDA 99

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            +L+  M +            M F+    P+   ++ II+   K G ++ A+ LF  M +
Sbjct: 100 IDLVSKMEE------------MGFR----PDVVIYNTIIDGSCKIGLVNDAVELFDRMER 143

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +   YN+L+ GLC S R  ++  L+R+M      P   T  ++     +      
Sbjct: 144 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 203

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ L  +M  +  +P V     LI  LC HG+  EA + L  MV +G LPD+V Y+  I 
Sbjct: 204 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G    KRVD   +LFR++   G   D + YN II G  +A R   A+++F+ M ++   P
Sbjct: 264 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---P 320

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
           ++ TY++L+ G C +  +++A++    M +K     D+ TY  +I G+C  G  +DA  L
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDAWDL 379

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           +  +  KG  P+ +++  +I+G C+  +   + + +R M+E G+ P
Sbjct: 380 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 1/317 (0%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M Q   + ++  ++ ++  +  S   +    L   ME  G     ++ N +  CLCR   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
            V AL++V KM   G+EP V   + LI   C+  +  +A   ++ M + GF PD+V Y+ 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I G   I  V+ A+ELF  +   G   D V YN +++GLC + R ++A  L  +M+ + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           ++P+V T+  +I+ + K G   +AM     M  +    PDV TY +LI+GLC+ GR D+A
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
             + + M  KGC P+ +T+  LI G CK  R       FR M ++G+  D   +  +I  
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 650 FLSELNPPLAFEVLKEM 666
           +     P  A E+   M
Sbjct: 300 YFQAGRPDAAQEIFSRM 316



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 156/313 (49%), Gaps = 1/313 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   F  +++ + K    DL +SLF  M   G   +++ YN +I+ LC  +R   +  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           + +M + G++P   T++S+    C+   V  A++LV KM   G  P V     +I   CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G   +A      M ++G   D V Y++ + GL    R   A  L RD+      P+V+ 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  +I    K  + +EA  L+ EM  + + P V TYN LING C  G +D+A   L  M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
            K    PDV+TY TLI+G C + R D+   L+ EM ++G   + IT+  +I G  +  RP
Sbjct: 248 TK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 622 RAALVHFRMMKEK 634
            AA   F  M  +
Sbjct: 307 DAAQEIFSRMDSR 319



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 214/471 (45%), Gaps = 53/471 (11%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+   ++ +L  + KS + DLV      M+  G G+D Y+   ++   C   +F  ALS
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V  +++  G+  + V  S L+  F +   V  A +L+ +M++   R +   +  +I G  
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K   V+ A++LFD+M + G  +DA  Y+ ++ GLC + +   A +L  +M    I P   
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP--- 183

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                       N +T    +++ + V  G   +A  L + M +
Sbjct: 184 ----------------------------NVITF--TAVIDVFVKEGKFSEAMKLYEEMTR 213

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                             V P+  +++ +IN L   G++D A  +   M   GC+ +V  
Sbjct: 214 R----------------CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 257

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI+G C S R++E  +L REM + G      T N++ +   +      A  +  +M 
Sbjct: 258 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM- 316

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                P ++  ++L+  LC + +  +A     +M +     DI  Y+  I G+  I  V+
Sbjct: 317 --DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 374

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
            A +LFR +   G  PDVV+Y  +ISG C+ ++  +++ L+ +M   GL+P
Sbjct: 375 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 25/429 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           FS +L   +K    D    L   M+ C I  +  ++ ++I+   + SR   AL +  KM 
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G+  D      +I G C+  ++  A+ L S+M+  G  PD  I + +I      G + 
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132

Query: 258 LLVKEIWE--DRD-VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
             V E+++  +RD V    +  NS++  L  +G    A  L++ M+  +           
Sbjct: 133 DAV-ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD----------- 180

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                + PN  +F  +I+  +K+GK   A+ L+ EMT+     +VF YN+LI+GLC   R
Sbjct: 181 -----IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 235

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNT 433
           ++E+ ++L  M   G  P   T N++    C+ + V     L R+M  +G     + +NT
Sbjct: 236 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 295

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I+   + G+   A    + M      P+I  YS  + GL    RV+ AL LF ++   
Sbjct: 296 -IIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 351

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
               D+  YNI+I G+CK   V +A DLF  +  KGL P V +Y  +I+G+C+    D++
Sbjct: 352 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 411

Query: 554 MLCLSRMLE 562
            L   +M E
Sbjct: 412 DLLYRKMQE 420



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 52/350 (14%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +GLV +A  LFD+++R+G+   +  +YN L+  LC S         +++M       +  
Sbjct: 128 IGLVNDAVELFDRMERDGV-RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           T T ++ V+   G+F +A+ ++ E+     VD  VF                        
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVF------------------------ 221

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                    T+  LI+G     RVD+A Q+ D M   G   D   Y+ +I G CK+K+++
Sbjct: 222 ---------TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
              +L+ EM   G+  D    + +I      G      +EI+   D        + ++  
Sbjct: 273 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD-AAQEIFSRMDSRPNIRTYSILLYG 331

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  N  +++A  L + M K E   D+                ++++I+I+ + K G ++ 
Sbjct: 332 LCMNWRVEKALVLFENMQKSEIELDI----------------TTYNIVIHGMCKIGNVED 375

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           A  LFR ++  G   +V  Y  +I G C   + ++S  L R+M+E G  P
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V+EA  + D +  +G C+P+  +YN L+   CKS  VD      +EM   
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D  T   ++Q Y  +G+ D A  +F+ +     +    +SILL        V+KA 
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI--RTYSILLYGLCMNWRVEKAL 342

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L E M    I L+  T+ ++IHG  K   V+ A  LF  ++  G   D   Y  +I G 
Sbjct: 343 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402

Query: 216 CKNKQLEMALQLYSEMKGSGITP 238
           C+ +Q + +  LY +M+  G+ P
Sbjct: 403 CRKRQWDKSDLLYRKMQEDGLLP 425


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 33/446 (7%)

Query: 188 KALQLFDKMTKSGFASDAA--MYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILS 244
            AL++F  +     +   +   Y  +I  LC++ +   AL+L+ +M   SG  PD    S
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS 151

Query: 245 KLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            +  SC++ G L    TLL K     R +       N+++ +L++ G    A  L ++ I
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAY--NNLLNLLIARGRAQDAVALFESWI 209

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                G  SP+  SF+++I  + + G    AL L   MT+ GC  +  
Sbjct: 210 Q---------------DGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTI 254

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +N L+DGLC + ++   ++LLR ++  G   P   T  S+    C+   +  AL++   
Sbjct: 255 THNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYND 314

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAME---AFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           M   G  P      +LI     +GKA++   A R    ++     PD+V +S+ I G   
Sbjct: 315 MLESGTRPNTVTYNVLIN---GYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCR 371

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG-LIPSVA 535
             ++D A+ +++++  H   P+V  ++III  LCK  R AEA     E+  +  + P   
Sbjct: 372 CGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTF 431

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            YN +I+  CK G +++A L ++ M EK    PD  TYT LI G C+ GR  +AI L+++
Sbjct: 432 IYNPVIDILCKGGQVEEANLIVTDMEEK-GCHPDKYTYTILIIGHCMKGRIPEAITLFHK 490

Query: 596 MEEKGCAPNRITFMALITGLCKCDRP 621
           M E GC P++IT  + I+ + K   P
Sbjct: 491 MVETGCRPDKITVNSFISCVLKAGMP 516



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 180/387 (46%), Gaps = 40/387 (10%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQNVFLYNNLIDGLCNSNRLEE 377
           +V P+  S+  +I  L + G+   AL LF +MT Q G + +   ++ +     N+  L+ 
Sbjct: 106 SVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDA 165

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLI 436
           +  LL +  + G +   +  N++   L  R     A+ L       G + P      ++I
Sbjct: 166 AVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVI 225

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           K +C+ G   +A   +  M + G  PD + ++  + GL   K+V+   +L R +   G C
Sbjct: 226 KGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVC 285

Query: 497 -PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +ISG CKA R+ +A  ++N+M+  G  P+  TYN+LING+ K+ +++ A+ 
Sbjct: 286 MPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVR 345

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            + R L      PDV+T+++LIDG C  G+ DDA+ +W EM +    PN  TF  +I  L
Sbjct: 346 -MYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSL 404

Query: 616 CKCDRPRAALVHFRM------------------------------------MKEKGMKPD 639
           CK +R   AL   R                                     M+EKG  PD
Sbjct: 405 CKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPD 464

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
            + +  LI     +   P A  +  +M
Sbjct: 465 KYTYTILIIGHCMKGRIPEAITLFHKM 491



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 206/463 (44%), Gaps = 55/463 (11%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDH-GWVDEHVF-SILLVAFSKWGEVDKACELIER 160
           + + ++ + C SG+   AL +F+++ D  G++ + VF S +  + +  G +D A  L+ +
Sbjct: 113 SYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTK 172

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNK 219
                 R+    +  L++  + + R   A+ LF+   + G ++ D   ++V+I G+C+  
Sbjct: 173 ASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVG 232

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             + AL+L   M   G +PD                                 T+  N +
Sbjct: 233 NFQKALELVERMTEFGCSPD---------------------------------TITHNIL 259

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           +  L     +++ ++LL+ + +                G   PN  ++  +I+   K G+
Sbjct: 260 VDGLCRAKQVNRGHDLLRRLQR---------------DGVCMPNVVTYTSVISGYCKAGR 304

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ ALS++ +M + G   N   YN LI+G   +  +E +  + R++      P   T +S
Sbjct: 305 MEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSS 364

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQE 458
           +    CR   +  A+ + ++M     +P V   +++I  LCK  ++ EA  FL ++ ++ 
Sbjct: 365 LIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRA 424

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
              P    Y+  I  L    +V+ A  +  D+   GC PD   Y I+I G C   R+ EA
Sbjct: 425 DIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEA 484

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSG---NIDQAMLCLS 558
             LF++M+  G  P   T N  I+   K+G    +DQ ML  S
Sbjct: 485 ITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIMLIAS 527



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 178/384 (46%), Gaps = 31/384 (8%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL-CKSCSVDLVEMRLKE 91
             F+     + GL++ A  L  +  + G  +   Y+YN LL  L  +  + D V +    
Sbjct: 150 FSFVAGSCTNAGLLDAAVTLLTKASQFGRRI-EPYAYNNLLNLLIARGRAQDAVALFESW 208

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGE 150
           +QD  +  D ++   +++  C  G F KAL +   + + G   D    +IL+    +  +
Sbjct: 209 IQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQ 268

Query: 151 VDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           V++  +L+ R+    + + N  T+  +I G+ K  R++ AL +++ M +SG   +   Y+
Sbjct: 269 VNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYN 328

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--- 266
           V+I G  K   +E A+++Y ++      PD    S LI      G+L   ++ IW++   
Sbjct: 329 VLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMR-IWKEMGQ 387

Query: 267 ----RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                +V T +++ +S+ +    N S +                 +G    +  +  ++P
Sbjct: 388 HHIQPNVYTFSIIIHSLCK---QNRSAEA----------------LGFLRELNMRADIAP 428

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
            T  ++ +I+ L K G+++ A  +  +M + GC  + + Y  LI G C   R+ E+  L 
Sbjct: 429 QTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 488

Query: 383 REMEESGFKPTHFTLNSMFRCLCR 406
            +M E+G +P   T+NS   C+ +
Sbjct: 489 HKMVETGCRPDKITVNSFISCVLK 512



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 160/344 (46%), Gaps = 21/344 (6%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           + P A   L+  L + G  ++A  LF+   ++GL  P+ +S+N +++ +C+  +      
Sbjct: 180 IEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALE 239

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAF 145
            ++ M ++G   D  T   L+   C + Q ++   +   +   G    +V  ++ ++  +
Sbjct: 240 LVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGY 299

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G ++ A  +   M +   R N  T+ VLI+G+ K   ++ A++++ ++       D 
Sbjct: 300 CKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDV 359

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE---GELTLLVKE 262
             +  +I G C+  QL+ A++++ EM    I P+    S +I S   +    E    ++E
Sbjct: 360 VTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRE 419

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
           +    D+   T + N ++ IL   G +++A NL+        + D      M  KG   P
Sbjct: 420 LNMRADIAPQTFIYNPVIDILCKGGQVEEA-NLI--------VTD------MEEKG-CHP 463

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
           +  ++ I+I      G++  A++LF +M + GC  +    N+ I
Sbjct: 464 DKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFI 507


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 231/512 (45%), Gaps = 51/512 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L +VY ++  FD +L VF+     G+ +DE      L+A  + G ++   E + +M D  
Sbjct: 124 LFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSG 183

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I +   ++  ++ G  KK  V +A  L D++   GF      Y+ ++ G           
Sbjct: 184 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG----------- 232

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
             Y E+K  G   +                L+L+ K +  D +V T T+L     R    
Sbjct: 233 --YIEIKDVGGVNEI---------------LSLMEKNVV-DYNVTTYTMLIEWYSR---- 270

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +  I++A  L   M+K               KG + P+   +  IIN   K G +  A  
Sbjct: 271 SSKIEEAEKLFDEMLK---------------KG-IEPDVYIYTSIINWNCKFGNMKRAFV 314

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EMT+   + N + Y  LI+G C +  ++ +  ++ +M+  G        N++    C
Sbjct: 315 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 374

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  +  AL L   M+ +G E       ++    C+  +  EA R L  M + G  P++V
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            +S  I      +    A  LF+ +   G  P VV YN  I   CK  ++ EA  L NEM
Sbjct: 435 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 494

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +GL+P   TY  LI+G   SGN+D+A+   + M  +   + +V+TYT +I GL   GR
Sbjct: 495 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEM-PQLGLNRNVVTYTVIISGLSKDGR 553

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            D+A  L++EM ++G  P+   + +LI  L K
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 236/489 (48%), Gaps = 21/489 (4%)

Query: 171 KTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           + FC +L   ++     D +L++FD   K GF  D       +  L ++  +E+ ++   
Sbjct: 118 EKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLR 177

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M  SGI       + ++     +GE+ +  K + ++       L+C      +++    
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEV-VRAKALMDE-------LVCKGFKPSVIT---- 225

Query: 290 DQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
              YN LL   I+ + +  V   + ++ K  V  N +++ ++I    +  K++ A  LF 
Sbjct: 226 ---YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 282

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + G   +V++Y ++I+  C    ++ ++ L  EM E    P  +T  ++    C+  
Sbjct: 283 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 342

Query: 409 DVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           ++  A  +V  M+ +G +   V  NTL+    CK G   EA R    M Q+GF  D    
Sbjct: 343 EMKAAEMMVNDMQSKGVDVNRVIFNTLM-DGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 401

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +    G     R + A  L   +   G  P+VV+++I+I   CK Q  AEA  LF  M  
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 461

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG  PSV TYN  I  +CK G +++A   ++ M E+    PD  TYT+LIDG   +G  D
Sbjct: 462 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER-GLMPDTYTYTSLIDGERASGNVD 520

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A+ L+NEM + G   N +T+  +I+GL K  R   A   +  M ++G+ PD  ++ +LI
Sbjct: 521 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580

Query: 648 SAFLSELNP 656
           ++ L ++ P
Sbjct: 581 AS-LHKVGP 588



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 223/498 (44%), Gaps = 51/498 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           +FD  +++G  +     +  LL AL +S +++L    L++M D G      + T ++   
Sbjct: 140 VFDYARKKGFEIDERSCFEFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 198

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+  +A ++ +E++  G+    + ++ LL  + +  +V    E++  M+   +  N 
Sbjct: 199 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 258

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ +LI  + + S++++A +LFD+M K G   D  +Y  II   CK   ++ A  L+ E
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    + P+      LI      GE+                               + +
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMK------------------------------AAE 348

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
              N +Q+                  KG V  N   F+ +++   K G +D AL L   M
Sbjct: 349 MMVNDMQS------------------KG-VDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q G   + F  N +  G C SNR EE+  LL  MEE G  P   + + +    C+ Q+ 
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  L + M  +G  P V      I+  CK GK  EA++ + +M + G +PD   Y++ 
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 509

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G      VD ALELF ++   G   +VV Y +IISGL K  R  EA  L++EM  +G+
Sbjct: 510 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 569

Query: 531 IPSVATYNLLINGWCKSG 548
           +P    Y+ LI    K G
Sbjct: 570 VPDDGIYSSLIASLHKVG 587



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 21/357 (5%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L+E   +S  ++  E    EM   G   D Y  T ++   C  G   +A  +F
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 316

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+ +   V + + +  L+    K GE+  A  ++  M    + +N   F  L+ G+ KK
Sbjct: 317 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 376

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
             +D+AL+L + M + GF  DA   ++I  G C++ + E A +L   M+  G+ P+   F
Sbjct: 377 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 436

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            IL  +     +  E   L K + E +      +  N+ +      G +++AY L+  M 
Sbjct: 437 SILIDIYCKEQNFAEARRLFK-VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +               +G + P+T ++  +I+     G +D AL LF EM Q+G  +NV 
Sbjct: 496 E---------------RGLM-PDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 539

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
            Y  +I GL    R +E+++L  EM + G  P     +S+   L +   +V  L  V
Sbjct: 540 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENV 596



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 2/214 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+++EA  L + ++++G  + + ++ N +    C+S   +  +  L  M++ G   +  +
Sbjct: 377 GMIDEALRLQNIMQQKGFEI-DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 435

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + L+ +YC    F +A  +F  +   G     V ++  +  + K G++++A +LI  M 
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  +  T+  LI G      VD+AL+LF++M + G   +   Y VII GL K+ + +
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 555

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            A +LY EM   GI PD  I S LI S    G L
Sbjct: 556 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589


>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
 gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 238/525 (45%), Gaps = 58/525 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VGL++EA  +FD++ +   C   +  YN  +  L      DL E     M   G     +
Sbjct: 22  VGLIDEAIRIFDEMTQSD-CPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQG-----F 75

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           +LTP          + + +S   EI + G +                       L+E M 
Sbjct: 76  SLTPF--------TYSRFISALCEIKNFGLIGR---------------------LLEDMK 106

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +   F + ++   +++ ++ AL+ FD+M   G   D   Y +I+  LCK KQ +
Sbjct: 107 QLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYD 166

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNS 278
            A++ +  M   G++PD +  + L+    D G++     L V E+  +   N   L+ NS
Sbjct: 167 KAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNN--LIFNS 224

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +M     +G I +A  +   M K       G E          P+  +++I++N      
Sbjct: 225 LMSGFCKSGRISKALAIKSFMSKH------GCE----------PDLITYNILLNFFCDGL 268

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
            L+LA    ++M +IG   +V+ YN L+ GLC +NRL+++Y+L+  M E G   T  + N
Sbjct: 269 MLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDT-VSYN 327

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           ++   LC+      A  L  +M  +   P V     LIK     G    A   L  M Q 
Sbjct: 328 TVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQT 387

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
             +PD++ Y+  +      +++++A  +FRD+   G  PDVV+YN +I+GLCKA +V+EA
Sbjct: 388 VLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEA 447

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
             L+ EM  +G  P   T+ L+I G  +   +  A     +M+EK
Sbjct: 448 MLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEK 492



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 229/528 (43%), Gaps = 38/528 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF   +    K G +D+A  + + M   +  +  + +   I   + +SR D A   + +M
Sbjct: 11  VFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM 70

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              GF+     Y   I  LC+ K   +  +L  +MK  G  PD    +  +     E  L
Sbjct: 71  IPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLL 130

Query: 257 TLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
            L +K   E      + DV T T++ +     L      D+A    + M+          
Sbjct: 131 ELALKFFDEMVAKGREPDVVTYTIIVDR----LCKAKQYDKAVEFWRCMVN--------- 177

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-----NVFLYNNL 365
                 KG +SP+  +   ++  L   GK+DLA  L      +G M+     N  ++N+L
Sbjct: 178 ------KG-LSPDMKACTALVVGLCDGGKVDLAYEL-----TVGEMKGEMKFNNLIFNSL 225

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           + G C S R+ ++  +   M + G +P   T N +    C    +  A   ++KM   G 
Sbjct: 226 MSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGM 285

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           EP V     L+K LCK  +  +A++ +  M ++G L D V Y+  IG L        A  
Sbjct: 286 EPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG-LCDTVSYNTVIGALCKSFATRKAYR 344

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF ++      PDV  +  +I           A+ L   M    LIP +  Y  +++ +C
Sbjct: 345 LFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFC 404

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           K+  I+ A      M+E    SPDV++Y  LI+GLC A +  +A++L+ EM+ +GC P+ 
Sbjct: 405 KTRKIEMAQGVFRDMIEI-GISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDE 463

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           +TF  +I GL +      A   +  M EKG   D F+   LI A  S 
Sbjct: 464 VTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRSR 511



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 176/382 (46%), Gaps = 37/382 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR--LEE 377
           +  N   F   I   +K G +D A+ +F EMTQ  C      YN  I  L + +R  L E
Sbjct: 5   LGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAE 64

Query: 378 SY---------------------------------ELLREMEESGFKPTHFTLNSMFRCL 404
           SY                                  LL +M++ G+ P  +  N     L
Sbjct: 65  SYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLL 124

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            R   +  AL    +M  +G EP V   T+++  LCK  +  +A  F   MV +G  PD+
Sbjct: 125 FRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDM 184

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
              +A + GL D  +VDLA EL           + + +N ++SG CK+ R+++A  + + 
Sbjct: 185 KACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSF 244

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M   G  P + TYN+L+N +C    ++ A   + +M E+    PDV +Y  L+ GLC A 
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKM-ERIGMEPDVYSYNQLLKGLCKAN 303

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           R D A  L N M EKG   + +++  +I  LCK    R A   F  M +K + PD+  F 
Sbjct: 304 RLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFA 362

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            LI AFL E +P +A  +L+ M
Sbjct: 363 TLIKAFLIEGSPHIAKGLLQTM 384



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 163/381 (42%), Gaps = 38/381 (9%)

Query: 322 PNTS-SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           P TS  ++  I  L+   + DLA S +  M   G     F Y+  I  LC          
Sbjct: 41  PVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGR 100

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           LL +M++ G+ P  +  N     L R   +  AL    +M  +G EP V   T+++  LC
Sbjct: 101 LLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLC 160

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL----------FRDI 490
           K  +  +A  F   MV +G  PD+   +A + GL D  +VDLA EL          F ++
Sbjct: 161 KAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNL 220

Query: 491 -------------------------CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
                                      HGC PD++ YNI+++  C    +  A     +M
Sbjct: 221 IFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKM 280

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G+ P V +YN L+ G CK+  +D+A   ++ M EK  G  D ++Y T+I  LC +  
Sbjct: 281 ERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEK--GLCDTVSYNTVIGALCKSFA 338

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
              A  L+ EM +K  AP+  TF  LI        P  A    + M +  + PD+  +  
Sbjct: 339 TRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTT 398

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           ++  F       +A  V ++M
Sbjct: 399 VVDYFCKTRKIEMAQGVFRDM 419



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 57/436 (13%)

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYG-----WGYDKY------------------- 102
           ++Y+  + ALC+  +  L+   L++M+  G     W ++ Y                   
Sbjct: 80  FTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDE 139

Query: 103 -----------TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
                      T T ++   C + Q+DKA+  +  +++ G   D    + L+V     G+
Sbjct: 140 MVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGK 199

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           VD A EL        ++ N   F  L+ GF K  R+ KAL +   M+K G   D   Y++
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNI 259

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDR 267
           ++   C    LE+A +   +M+  G+ PD    ++L+        L     L+  +WE  
Sbjct: 260 LLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
             +T++   N+++  L  + +  +AY L + M + +                V+P+  +F
Sbjct: 320 LCDTVSY--NTVIGALCKSFATRKAYRLFEEMGQKD----------------VAPDVGTF 361

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I   L +G   +A  L + MTQ   + ++  Y  ++D  C + ++E +  + R+M E
Sbjct: 362 ATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIE 421

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P   + N++   LC+   V  A+ L  +M+++G  P      L+I  L +  +   
Sbjct: 422 IGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSL 481

Query: 448 AFRFLTDMVQEGFLPD 463
           A +    M+++G+  D
Sbjct: 482 ACQVWDQMMEKGYTLD 497



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 24/349 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLV-EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           P+  +   L+  LC    VDL  E+ + EM+     ++      L+  +C SG+  KAL+
Sbjct: 182 PDMKACTALVVGLCDGGKVDLAYELTVGEMKG-EMKFNNLIFNSLMSGFCKSGRISKALA 240

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + + +  HG   D   ++ILL  F     ++ A + +++M+   +  +  ++  L+ G  
Sbjct: 241 IKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLC 300

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K +R+DKA +L + M + G   D   Y+ +IG LCK+     A +L+ EM    + PD  
Sbjct: 301 KANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVG 359

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNGSIDQAYNLLQA 298
             + LI +   EG    + K + +      +    +   +++        I+ A  + + 
Sbjct: 360 TFATLIKAFLIEGS-PHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRD 418

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MI      ++G+          SP+  S++ +IN L K  K+  A+ L+ EM   GC  +
Sbjct: 419 MI------EIGI----------SPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPD 462

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
              +  +I GL     L  + ++  +M E G+    F   ++ + +  R
Sbjct: 463 EVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRSR 511


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 172/333 (51%), Gaps = 1/333 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  +++ +I  L K G L  A  L  EM   GC  NV  Y  LID  C   RLEE+  
Sbjct: 11  GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +L EM   G        N +   LC+ + V  ALN+   M  +G +P +     LI  LC
Sbjct: 71  VLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC 130

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  K  EA     DM+ EG + + + Y+  I   +    +  AL+L  D+   GC  D +
Sbjct: 131 KVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 190

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +I  LC+A  + +   LF +M++KGL P+  + N+LING C++GNI  A+  L  M
Sbjct: 191 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + +   +PD++TY +LI+GLC  GR  +A+ L+++++ +G  P+ IT+  LI+  CK   
Sbjct: 251 IHR-GLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 309

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
              A +      + G  P+   +  L+S F+ E
Sbjct: 310 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 147/267 (55%), Gaps = 3/267 (1%)

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G  P  FT N++   LC++  +V A  L+ +M+++G EP V   T+LI   CK G+
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L +M  +G   + V Y+  I  L   ++V  AL +F D+ + GC PD+  +N 
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I GLCK  +  EA  L+ +M+ +G+I +  TYN LI+ + + G + +A+  ++ ML + 
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR- 183

Query: 565 SGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
            G P D ITY  LI  LC AG  +  + L+ +M  KG  PN I+   LI GLC+    + 
Sbjct: 184 -GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAF 650
           AL   R M  +G+ PD+  + +LI+  
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGL 269



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 165/365 (45%), Gaps = 28/365 (7%)

Query: 192 LFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS 251
           + + M   G   D   Y+ +I GLCK   L  A +L +EM+  G  P+    + LI    
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 252 DEGELTLLVKEIWEDRDV----NTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIA 306
            EG L        E R+V    +   L  N++             YN L+ A+ K E + 
Sbjct: 61  KEGRLE-------EARNVLDEMSGKGLALNAV------------GYNCLISALCKDEKVQ 101

Query: 307 DVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           D  + M   M  KG   P+  +F+ +I  L K  K + AL L+++M   G + N   YN 
Sbjct: 102 DA-LNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           LI        ++E+ +L+ +M   G      T N + + LCR  ++   L L   M  +G
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
             P      +LI  LC+ G    A  FL DM+  G  PDIV Y++ I GL    R   AL
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            LF  +   G CPD + YN +IS  CK     +A  L +  +  G IP+  T+ +L++ +
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339

Query: 545 CKSGN 549
            K G+
Sbjct: 340 IKEGD 344



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 167/348 (47%), Gaps = 26/348 (7%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   ++ L++   K G +  A EL+  M       N  T+ +LI  F K+ R+++A  + 
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD- 252
           D+M+  G A +A  Y+ +I  LCK+++++ AL ++ +M   G  PD    + LI      
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 253 ---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADV 308
              E  L L    + E    NT+T   N+++   +  G++ +A  L+  M+ +G P+ D+
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITY--NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDI 190

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                            +++ +I  L + G ++  L+LF +M   G   N    N LI+G
Sbjct: 191 -----------------TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 233

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP- 427
           LC +  ++ + E LR+M   G  P   T NS+   LC+      ALNL  K++V+G  P 
Sbjct: 234 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
            + +NT LI   CK G   +A   L+  V  GF+P+ V +   +   I
Sbjct: 294 AITYNT-LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 340



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 2/236 (0%)

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           +NTL++  LCK G  + A   + +M  +G  P+++ Y+  I       R++ A  +  ++
Sbjct: 17  YNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
              G   + V YN +IS LCK ++V +A ++F +M +KG  P + T+N LI G CK    
Sbjct: 76  SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 135

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMA 610
           ++A+     ML  E    + ITY TLI      G   +A+ L N+M  +GC  + IT+  
Sbjct: 136 EEALGLYQDML-LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194

Query: 611 LITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LI  LC+       L  F  M  KG+ P+      LI+      N   A E L++M
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 148/348 (42%), Gaps = 52/348 (14%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P+ ++YN L+  LCK   +      + EMQ  G   +  T T L+  +C  G+ ++A 
Sbjct: 10  CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 69

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +V +E+   G                                  + LN   +  LI    
Sbjct: 70  NVLDEMSGKG----------------------------------LALNAVGYNCLISALC 95

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +V  AL +F  M+  G   D   ++ +I GLCK  + E AL LY +M   G+  +  
Sbjct: 96  KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 155

Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI +    G +   +K + +   R      +  N +++ L   G+I++   L + M
Sbjct: 156 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 215

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +                KG ++PN  S +I+IN L + G +  AL   R+M   G   ++
Sbjct: 216 MS---------------KG-LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 259

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             YN+LI+GLC + R +E+  L  +++  G  P   T N++    C+ 
Sbjct: 260 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 37/247 (14%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +EEA  + D++  +GL + N   YNCL+ ALCK   V        +M   G   D +T
Sbjct: 63  GRLEEARNVLDEMSGKGLAL-NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV------------------------------ 133
              L+   C   +F++AL ++ +++  G +                              
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181

Query: 134 ------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                 D+  ++ L+ A  + G ++K   L E M    +  N  +  +LI+G  +   + 
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            AL+    M   G   D   Y+ +I GLCK  + + AL L+ +++  GI PD    + LI
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301

Query: 248 TSCSDEG 254
           +    EG
Sbjct: 302 SWHCKEG 308



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 2/221 (0%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  V   EEA  L+  +  EG+ + N  +YN L+ A  +  ++      + +M   
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGV-IANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKA 154
           G   D  T   L++  C +G  +K L++F +++  G    ++  +IL+    + G +  A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E +  M    +  +  T+  LI+G  K  R  +AL LFDK+   G   DA  Y+ +I  
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            CK    + A  L S    SG  P+      L+++   EG+
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/545 (27%), Positives = 236/545 (43%), Gaps = 65/545 (11%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C   +   A  V + +   G  D    + L+  + + G +  A E +      + 
Sbjct: 118 LIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADA-ERLLAAAGLSG 176

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             N  T+  LI+G+ +  R+  AL L   M     A D   Y+ ++ GLC  +Q E A  
Sbjct: 177 AANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEA 233

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L +EM  +   P+               E+T   +                  +R    N
Sbjct: 234 LMAEMVRNHCPPN---------------EVTFATQ------------------IRAFCQN 260

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G +D+A  LL  M +                   +P+   +  ++N   + G++D A+ L
Sbjct: 261 GLLDRAVQLLDRMPQY----------------GCTPDVVIYSTLVNGFSEQGRVDDAIEL 304

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
              M    C  N   YN  + GLC + R E+  +L+ EM      P   T + +  CLC+
Sbjct: 305 LNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQ 361

Query: 407 RQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
              V  A+ ++ +M   G  P  V +NTL I    + G+  +A + L  M      PD++
Sbjct: 362 NGLVDCAMEVLEQMHKYGCRPDAVIYNTL-IYSFSEQGRVDDALKLLNSMPCS---PDVI 417

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            ++AA+ GL   +R D A EL   +    C    + +NI+I  LC+  RV  A ++F +M
Sbjct: 418 SFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQM 477

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
              G  P + TY+ LING  + G ++ A+     M  K    PD+  Y  ++ GLC A R
Sbjct: 478 PKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK----PDIFGYNAVLKGLCRAAR 533

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            +DA  L + M  K C PN ITF  LI  LC+      A+  F  M + G  PD+F + A
Sbjct: 534 WEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNA 593

Query: 646 LISAF 650
           LI+ F
Sbjct: 594 LINGF 598



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 254/579 (43%), Gaps = 76/579 (13%)

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
           N L++ LC    +   E  L  ++  G   D  +   L+  YC  G+   A  +      
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAG-AADPVSHNTLVAGYCRDGRLADAERLLAAAGL 174

Query: 130 HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            G  +   ++ L+  + + G +  A  LI  M    +  +  T+  ++ G     + + A
Sbjct: 175 SGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDA 231

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             L  +M ++    +   +   I   C+N  L+ A+QL   M   G TPD  I S L+  
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA--- 306
            S++G +   ++ +      N M    N+I             YN   A +KG  IA   
Sbjct: 292 FSEQGRVDDAIELL------NGMLCKPNTI------------CYN---AALKGLCIAQRW 330

Query: 307 -DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
            DVG  ++ + +    PN ++F ++ + L ++G +D A+ +  +M + GC  +  +YN L
Sbjct: 331 EDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTL 390

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I       R++++ +LL  M  S   P   + N+  + LCR +    A  L+ +M ++  
Sbjct: 391 IYSFSEQGRVDDALKLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQM-LRED 446

Query: 426 EPWVKHN-TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            P ++    +LI  LC++G+   A      M + G  PDIV YS+ I GL +   V+ A+
Sbjct: 447 CPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAI 506

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL----------------------- 521
           ELF+ +    C PD+  YN ++ GLC+A R  +A +L                       
Sbjct: 507 ELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSL 563

Query: 522 ------------FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
                       F +M   G  P + TYN LING+ + G +D A     R+L   S  PD
Sbjct: 564 CQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDA----RRLLSTMSCKPD 619

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            ++Y + + GLC A R  +A  +  EM    C PN +TF
Sbjct: 620 AVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 10/344 (2%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +IN   + G+L  AL+L   M       + + YN ++ GLC + + E++  L+
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            EM  +   P   T  +  R  C+   +  A+ L+ +M   G  P V   + L+    + 
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  +A   L  M+ +   P+ +CY+AA+ GL   +R +   +L  ++    C P+   +
Sbjct: 296 GRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           +++ S LC+   V  A ++  +M   G  P    YN LI  + + G +D A+    ++L 
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL----KLLN 408

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
               SPDVI++   + GLC A R DDA  L  +M  + C    +TF  LI  LC+  R  
Sbjct: 409 SMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVN 468

Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+  F  M + G  PD+  + +LI+    +     A E+ + M
Sbjct: 469 NAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM 512



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 9/304 (2%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           N LI  LC   RL ++  +L  ++ +G      + N++    CR   +  A  L+    +
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAG-AADPVSHNTLVAGYCRDGRLADAERLLAAAGL 174

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G    V + TL I   C+ G+  +A   +  M      PD   Y+  + GL   ++ + 
Sbjct: 175 SGAANVVTYTTL-INGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWED 230

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           A  L  ++  + C P+ V +   I   C+   +  A  L + M   G  P V  Y+ L+N
Sbjct: 231 AEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVN 290

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G+ + G +D A+  L+ ML K    P+ I Y   + GLCIA R +D   L  EM  K C 
Sbjct: 291 GFSEQGRVDDAIELLNGMLCK----PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN  TF  L + LC+      A+     M + G +PD  ++  LI +F  +     A ++
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 663 LKEM 666
           L  M
Sbjct: 407 LNSM 410



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 166/396 (41%), Gaps = 60/396 (15%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
           A+R   +  L  ++V+  C  +      L  CL   GLV+ A  + +Q+ + G C P+  
Sbjct: 327 AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYG-CRPDAV 385

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
            YN L+ +  +   VD     LK +       D  +    L+  C + ++D A  +  ++
Sbjct: 386 IYNTLIYSFSEQGRVDDA---LKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQM 442

Query: 128 I-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           + +   + E  F+IL+ +  + G V+ A E+ E+M       +  T+  LI+G  ++  V
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A++LF  M       D   Y+ ++ GLC+  + E A +L S M      P+ EI    
Sbjct: 503 ESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPN-EI---- 554

Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                                   T  +L NS    L   G +D+A  + + M K     
Sbjct: 555 ------------------------TFNILINS----LCQKGLVDRAIEVFEQMPK----- 581

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                      G+ +P+  +++ +IN   + G+LD A  L   M+   C  +   YN+ +
Sbjct: 582 ----------YGS-TPDIFTYNALINGFSEQGRLDDARRLLSTMS---CKPDAVSYNSAL 627

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
            GLC + R +E+ E++ EM      P   T     R
Sbjct: 628 KGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANR 663


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/648 (24%), Positives = 275/648 (42%), Gaps = 63/648 (9%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C  +P     LIR     G+V +A   F  +   G   P+ Y+ N LL  L K   V  V
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFN-PSVYTCNMLLGKLVKERKVGAV 152

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAF 145
            +  KEM              L +  C                     D   F+IL+   
Sbjct: 153 WLFFKEM--------------LARRVCP--------------------DVSTFNILINVL 178

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
              G++ KA  L+++M++     +  T+  +++ + KK R   AL+L D+M   G  +DA
Sbjct: 179 CVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADA 238

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y++++  LCKN +      L  +M+   I+P+    + +I     EG++    +   E
Sbjct: 239 CTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQE 298

Query: 266 DRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
              +N +   +  N+++     +G+ +QA  +L+ M    P                 PN
Sbjct: 299 MSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP----------------KPN 342

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             S+  ++N L +  K +L+ S+   M   G +     Y  +IDGLC +  L ES +LL 
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           +M + G  P   T + +    CR   +     ++ KM   G  P     T LI   CK G
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
             +EAF+    M + G+  +    +  +  L    +V +A   F  +   G  P+ + ++
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            II+G   +    +A  +F+EMI  G  PS  TY  L+   C++G   +A     R+L+K
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEA----KRLLDK 578

Query: 564 ESGSP---DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
               P   D +TY T++     +G   DA+ L++EM ++   P+  T+  +  GL +  +
Sbjct: 579 LHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGK 638

Query: 621 PRAALVHF--RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             AAL HF   ++ +  + P+  ++   +           A    ++M
Sbjct: 639 MVAAL-HFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDM 685



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 262/610 (42%), Gaps = 23/610 (3%)

Query: 51  MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
           + F ++    +C P+  ++N L+  LC    +      LK+M++ G+     T   +L  
Sbjct: 154 LFFKEMLARRVC-PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 111 YCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLN 169
           YC  G++  AL + +++   G   D   +++L+    K     K   L+++M    I  N
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           E T+  +I+GFVK+ ++  A ++F +M+      +   Y+ +I G C +   E AL +  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC---NSIMRILVSN 286
            M+ +G  P+    S L+       +  L  K I E   +N M + C    +++  L  N
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFEL-SKSILERMRMNGMIVGCIAYTAMIDGLCRN 391

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G ++++  LL  M+K                  V P+  +F ++IN   + GK+     +
Sbjct: 392 GLLNESVKLLDKMLKD----------------GVVPDVVTFSVLINGFCRVGKIKNVKEI 435

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
             +M + G   N  +Y  LI   C +  + E++++   M   G+    F  N +   LC+
Sbjct: 436 ICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A      M   G+ P       +I      G  ++AF    +M++ G  P    
Sbjct: 496 DGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFT 555

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           Y   +  L    +   A  L   +       D V YN I+    K+  + +A  LF+EM+
Sbjct: 556 YGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMV 615

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
            + ++P   TY ++  G  + G +  A+     +L K + SP+ + YTT +DGL  AG+ 
Sbjct: 616 QRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQS 675

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-GMKPDMFVFVA 645
             A+    +ME+ G   + I    ++ G  +  +   A   F MM     + P +  +  
Sbjct: 676 KAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNI 735

Query: 646 LISAFLSELN 655
           L+  +  + N
Sbjct: 736 LLHGYAKKKN 745



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 153/598 (25%), Positives = 277/598 (46%), Gaps = 20/598 (3%)

Query: 43   VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
             G V EA  ++  + R G    N +  N L+ +LCK   V + E     M   G   +  
Sbjct: 461  TGDVVEAFKVYVAMSRIGY-DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 103  TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERM 161
            T   ++  Y NSG   KA S+F+E+I  G    H  +  LL A  + G+  +A  L++++
Sbjct: 520  TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 162  DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                  ++  T+  ++    K   +  A+ LFD+M +     D+  Y +I  GL +  ++
Sbjct: 580  HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639

Query: 222  EMALQLYSEMKGSG-ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
              AL  Y  + G G ++P+  + +  +      G+ +       ED + N    LC    
Sbjct: 640  VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQ-SKAALYFCEDMEKNG---LCAD-- 693

Query: 281  RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG-TVSPNTSSFDIIINTLLKDGK 339
              L++   I   Y+ +  M K   I        M++ G T+SP+ ++++I+++   K   
Sbjct: 694  --LIATNVILNGYSRMGKMAKAGDI------FTMMWSGITISPSLATYNILLHGYAKKKN 745

Query: 340  LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            L    +L+  M + G   +    ++LI G C S  L+   +LL++M   G      T N 
Sbjct: 746  LSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNM 805

Query: 400  MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
            +    C   +V  A +LV  M +    P +  +  +I  L +     E+   L +M++ G
Sbjct: 806  LIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERG 865

Query: 460  FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
             +PD   Y A +  +  +  +  A +L  ++ A G     VA + ++ GL K  +V EA+
Sbjct: 866  CIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAK 925

Query: 520  DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             + + M+ K LIP++AT+  L++ +C++ ++ +A L L   ++      DVI Y  LI G
Sbjct: 926  LVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEA-LKLKDTMDFCDVKLDVIAYNVLISG 984

Query: 580  LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA-ALVHFRMMKEKGM 636
            LC  G    A+ L+ E++++G  PN  T+  LI  +   D   A   V  + ++E+G+
Sbjct: 985  LCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGV 1042



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 143/690 (20%), Positives = 282/690 (40%), Gaps = 50/690 (7%)

Query: 7   RARRIAPLRVLAQDVVK-----------SRCFMSPGALGFLIRCLGSVGLV--------- 46
           R R I+P  +    ++            +R F     L  L  C+    L+         
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           E+A  + + ++  G   PN  SY+ LL  LC+    +L +  L+ M+  G        T 
Sbjct: 325 EQALTILEMMEATG-PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTA 383

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           ++   C +G  ++++ + ++++  G V + V FS+L+  F + G++    E+I +M    
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           +  N   +  LI+ + K   V +A +++  M++ G+ ++  + +V++  LCK+ ++ +A 
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMR 281
             +  M   G  P+      +I    + G      ++  + I      +  T     +++
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY--GGLLK 561

Query: 282 ILVSNGSIDQAYNLLQAM-------------------IKGEPIADVGVEMLMIFKGTVSP 322
            L   G   +A  LL  +                    K   + D       + +  V P
Sbjct: 562 ALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYEL 381
           ++ ++ II   L++ GK+  AL  +  +   G +     +Y   +DGL  + + + +   
Sbjct: 622 DSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYF 681

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ-GHEPWVKHNTLLIKELC 440
             +ME++G        N +     R   +  A ++   M       P +    +L+    
Sbjct: 682 CEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYA 741

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K     +       M++ G  PD +   + I G      +D+ L+L + +   G   D  
Sbjct: 742 KKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQC 801

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            +N++I   C+   V +A DL N M    + P + T++ +I+   +   + ++ L L  M
Sbjct: 802 TFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEM 861

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           LE+    PD   Y  L++ +C  G    A  L +EME  G +   +   AL+ GL KC +
Sbjct: 862 LERGC-IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGK 920

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              A +    M  K + P +  F  L+  F
Sbjct: 921 VEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 36   LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
            +I  L  V  V+E+++L  ++   G C+P+   Y  L+  +C+   +        EM+  
Sbjct: 841  IISVLSRVSTVQESHLLLHEMLERG-CIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEAL 899

Query: 96   GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
            G        + L++     G+ ++A  V + ++    +     F+ L+  F +   + +A
Sbjct: 900  GISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEA 959

Query: 155  CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             +L + MD C+++L+   + VLI G      V  AL+L+ ++ + G   +   Y ++I  
Sbjct: 960  LKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDA 1019

Query: 215  LCKN 218
            +  N
Sbjct: 1020 IFTN 1023


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 225/477 (47%), Gaps = 31/477 (6%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   F+IL+  F   G ++ A  ++ ++       +  T   LI G     +V +AL   
Sbjct: 98  DLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFH 157

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSD 252
           D +   GF  D   Y  +I GLCK  +   ALQ+  ++ G  + P+  + + +I S C D
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217

Query: 253 EGELT-------LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
           +  +        ++VK I+ D  V T T L                   +   +I G   
Sbjct: 218 KLVIHASDLCSEMIVKRIFPD--VVTYTTL-------------------IYGCLIVGRLK 256

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
             VG+   M+ K  + P+  +F+I+++ L K+G++  A ++   M + G   N+  YN+L
Sbjct: 257 EAVGLFNQMLLK-NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSL 315

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           +DG     +  ++  +   M   G  P   + + M   LC+ + V  A+NL ++M  +  
Sbjct: 316 MDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
            P       LI  L K+G+  +A+  + +M   G   D++ YS+ +  L    +VD A+ 
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           L   I   G  P++  Y I++ GLCK  R+ +A+ ++ +++ KG    V  YN+++NG C
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           K G  D+A+  +S+M E     PD +TY TL+  L    + D A+ L  EM  +G A
Sbjct: 496 KEGLFDEALSLVSKM-EDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSA 551



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 244/553 (44%), Gaps = 56/553 (10%)

Query: 118 DKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           D A+S FN I+      + +F    +L +  K      A    ++M+   I+ +  TF +
Sbjct: 45  DDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI+ F     ++ A  +  K+ K GF  D      +I GLC N ++  AL  + ++   G
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
              D      LI                           LC +        G    A  +
Sbjct: 165 FHLDQVSYGTLING-------------------------LCKT--------GETRAALQV 191

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+            ++ L+     V PN   ++ II++L KD  +  A  L  EM     
Sbjct: 192 LRK-----------IDGLL-----VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  LI G     RL+E+  L  +M     KP  +T N +   LC+  ++  A N
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295

Query: 416 LVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           ++  M  QG +   V +N+L+        +    F F T M + G  PD+  YS  I GL
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT-MARRGVTPDVQSYSIMINGL 354

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
              K VD A+ LF+++ +    P+ V YN +I GL K  R+++A DL NEM  +G    V
Sbjct: 355 CKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV 414

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLW 593
            TY+ L++  CK+  +D+A+  ++++  K+ G  P++ TYT L+DGLC  GR  DA  ++
Sbjct: 415 ITYSSLLDALCKNHQVDKAITLITKI--KDQGIQPNIYTYTILVDGLCKNGRLKDAQAVY 472

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            ++  KG   +   +  ++ GLCK      AL     M++ G  PD   +  L+ A    
Sbjct: 473 QDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFEN 532

Query: 654 LNPPLAFEVLKEM 666
                A ++L+EM
Sbjct: 533 DKNDKAVKLLREM 545



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 167/363 (46%), Gaps = 37/363 (10%)

Query: 340 LDLALSLFREMTQI-GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +D A+S F  +  +   +Q +F +N ++  L   N    +    ++ME    +P  FT N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +  C C    +  A +++ K+   G  P     T LIK LC +GK  EA  F  D++ +
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ----- 513
           GF  D V Y   I GL        AL++ R I      P+VV YN II  LCK +     
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 514 ------------------------------RVAEAEDLFNEMITKGLIPSVATYNLLING 543
                                         R+ EA  LFN+M+ K + P V T+N+L++G
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
            CK G + +A   L+ M+ K+    +++TY +L+DG  +  + + A  ++N M  +G  P
Sbjct: 284 LCKEGEMKKARNVLAVMI-KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           +  ++  +I GLCK      A+  F+ M  K M P+   + +LI   L       A++++
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402

Query: 664 KEM 666
            EM
Sbjct: 403 NEM 405



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 241/546 (44%), Gaps = 41/546 (7%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV-----EMRLKEMQDYGWGYD 100
           V++A   F+ +      V   + +N +L +L K            +M LK++Q      D
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQP-----D 98

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIE 159
            +T   L+  +C+ G  + A SV  +I   G+  + V  + L+      G+V +A    +
Sbjct: 99  LFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHD 158

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +      L++ ++  LI+G  K      ALQ+  K+       +  MY+ II  LCK+K
Sbjct: 159 DVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDK 218

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--------TLLVKEIWEDRDVNT 271
            +  A  L SEM    I PD    + LI  C   G L         +L+K I    DV T
Sbjct: 219 LVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNI--KPDVYT 276

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +L +     L   G + +A N+L  MIK                  V  N  +++ ++
Sbjct: 277 FNILVDG----LCKEGEMKKARNVLAVMIKQ----------------GVDSNIVTYNSLM 316

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +      + + A  +F  M + G   +V  Y+ +I+GLC +  ++E+  L +EM      
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   T NS+   L +   +  A +LV +M  +G    V   + L+  LCK+ +  +A   
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           +T +  +G  P+I  Y+  + GL    R+  A  +++D+   G   DV  YN++++GLCK
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
                EA  L ++M   G IP   TY  L+    ++   D+A+  L  M+ + S     I
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNI 556

Query: 572 TYTTLI 577
           +  +++
Sbjct: 557 SSNSML 562


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 168/329 (51%), Gaps = 4/329 (1%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +   +IN   +  ++  A+ L  +M ++G   +V +YN +IDG C    + ++ EL
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
              ME  G +    T NS+   LC       A  L+R M ++   P V   T +I    K
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  EA +   +M +    PD+  Y++ I GL    RVD A ++   +   GC PDVV 
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +I+G CK++RV E   LF EM  +GL+    TYN +I G+ ++G  D A    SRM 
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM- 375

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
                 P++ TY+ L+ GLC+  R + A++L+  M++     +  T+  +I G+CK    
Sbjct: 376 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             A   FR +  KG+KPD+  +  +IS F
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGF 461



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 186/342 (54%), Gaps = 6/342 (1%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S++I+IN L +  +  +ALS+  +M + G   +V   ++LI+G C  NR+ ++ +L+ +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGK 444
           EE GF+P     N++    C+   V  A+ L  +M   G     V +N+L +  LC  G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL-VAGLCCSGR 224

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A R + DMV    +P+++ ++A I   +   +   A++L+ ++      PDV  YN 
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I+GLC   RV EA+ + + M+TKG +P V TYN LING+CKS  +D+    L R + + 
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK-LFREMAQR 343

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
               D ITY T+I G   AGRPD A  +++ M+ +   PN  T+  L+ GLC   R   A
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKA 400

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LV F  M++  ++ D+  +  +I       N   A+++ + +
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 165/327 (50%), Gaps = 1/327 (0%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           L+  + LF +M Q   + ++  ++ ++  +  S   +    L   ME  G     ++ N 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  CLCR    V AL++V KM   G+EP V   + LI   C+  +  +A   ++ M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F PD+V Y+  I G   I  V+ A+ELF  +   G   D V YN +++GLC + R ++A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            L  +M+ + ++P+V T+  +I+ + K G   +AM     M  +    PDV TY +LI+G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLING 288

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           LC+ GR D+A  + + M  KGC P+ +T+  LI G CK  R       FR M ++G+  D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
              +  +I  +     P  A E+   M
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRM 375



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 220/489 (44%), Gaps = 57/489 (11%)

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           E+D  C++I+     +I      F  ++    K    D  + LF  M   G   D   Y+
Sbjct: 53  EIDLFCKMIQSRPLPSI----VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
           ++I  LC+  +  +AL +  +M   G  P                             DV
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEP-----------------------------DV 139

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            T++ L N           +  A +L+  M +            M F+    P+   ++ 
Sbjct: 140 VTVSSLING----FCQGNRVFDAIDLVSKMEE------------MGFR----PDVVIYNT 179

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           II+   K G ++ A+ LF  M + G   +   YN+L+ GLC S R  ++  L+R+M    
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
             P   T  ++     +      A+ L  +M  +  +P V     LI  LC HG+  EA 
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
           + L  MV +G LPD+V Y+  I G    KRVD   +LFR++   G   D + YN II G 
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
            +A R   A+++F+ M ++   P++ TY++L+ G C +  +++A++    M +K     D
Sbjct: 360 FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELD 415

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           + TY  +I G+C  G  +DA  L+  +  KG  P+ +++  +I+G C+  +   + + +R
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475

Query: 630 MMKEKGMKP 638
            M+E G+ P
Sbjct: 476 KMQEDGLLP 484



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 223/492 (45%), Gaps = 55/492 (11%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           S+ L EE ++    ++   L  P+   ++ +L  + KS + DLV      M+  G G+D 
Sbjct: 47  SMNLEEEIDLFCKMIQSRPL--PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIER 160
           Y+   ++   C   +F  ALSV  +++  G+  + V  S L+  F +   V  A +L+ +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M++   R +   +  +I G  K   V+ A++LFD+M + G  +DA  Y+ ++ GLC + +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
              A +L  +M    I P                               N +T    +++
Sbjct: 225 WSDAARLMRDMVMRDIVP-------------------------------NVITF--TAVI 251

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
            + V  G   +A  L + M +                  V P+  +++ +IN L   G++
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRR----------------CVDPDVFTYNSLINGLCMHGRV 295

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           D A  +   M   GC+ +V  YN LI+G C S R++E  +L REM + G      T N++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
            +   +      A  +  +M      P ++  ++L+  LC + +  +A     +M +   
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             DI  Y+  I G+  I  V+ A +LFR +   G  PDVV+Y  +ISG C+ ++  +++ 
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472

Query: 521 LFNEMITKGLIP 532
           L+ +M   GL+P
Sbjct: 473 LYRKMQEDGLLP 484



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 205/429 (47%), Gaps = 25/429 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           FS +L   +K    D    L   M+ C I  +  ++ ++I+   + SR   AL +  KM 
Sbjct: 72  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G+  D      +I G C+  ++  A+ L S+M+  G  PD  I + +I      G + 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191

Query: 258 LLVKEIWE--DRD-VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
             V E+++  +RD V    +  NS++  L  +G    A  L++ M+  +           
Sbjct: 192 DAV-ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD----------- 239

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                + PN  +F  +I+  +K+GK   A+ L+ EMT+     +VF YN+LI+GLC   R
Sbjct: 240 -----IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNT 433
           ++E+ ++L  M   G  P   T N++    C+ + V     L R+M  +G     + +NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            +I+   + G+   A    + M      P+I  YS  + GL    RV+ AL LF ++   
Sbjct: 355 -IIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
               D+  YNI+I G+CK   V +A DLF  +  KGL P V +Y  +I+G+C+    D++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470

Query: 554 MLCLSRMLE 562
            L   +M E
Sbjct: 471 DLLYRKMQE 479



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V+EA  + D +  +G C+P+  +YN L+   CKS  VD      +EM   
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D  T   ++Q Y  +G+ D A  +F+ +     +    +SILL        V+KA 
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI--RTYSILLYGLCMNWRVEKAL 401

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L E M    I L+  T+ ++IHG  K   V+ A  LF  ++  G   D   Y  +I G 
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461

Query: 216 CKNKQLEMALQLYSEMKGSGITP 238
           C+ +Q + +  LY +M+  G+ P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 187/390 (47%), Gaps = 17/390 (4%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N I++ L S G +  A  L+  M +   I                P+  S   +I   ++
Sbjct: 134 NEILQRLCSRGKLTVAARLIDVMARKSQI----------------PHFPSCTNLIRGFIR 177

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +D A     +M   G + +   YN +I GLC + RL  + +L+ +M  SG  P   T
Sbjct: 178 KGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAIT 237

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            NS+ RCL  + +   A+N  R    +G  P++   T+LI+ +CK+  A  A   L DM 
Sbjct: 238 YNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMA 297

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            EG  PDIV Y++ +       + +    +  ++ +HG  P+ V YN +I  L       
Sbjct: 298 MEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWD 357

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           E +D+   M      P+  TYN+L+NG CKSG +D+A+   S M+  E+ SPD+ITY TL
Sbjct: 358 EVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMV-TENCSPDIITYNTL 416

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + GLC  G  D+ I L N +    C+P  +T+  +I GL +     +A   +  M +KG+
Sbjct: 417 LSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGI 476

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            PD     +L   F        A E+LKEM
Sbjct: 477 IPDEITHSSLTWGFCRADQLEEATELLKEM 506



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 191/412 (46%), Gaps = 21/412 (5%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           LI GF++K  VD+A +  +KM  SG   D   Y+++IGGLCKN +L  AL L  +M  SG
Sbjct: 171 LIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
            +PD    + +I    D+G     V   W D+       L       L++       Y +
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVN-FWRDQ-------LRKGCPPYLIT-------YTV 275

Query: 296 LQAMIKGEPIADVGVEML--MIFKGTVSPNTSSFDIIINTLLKDGKL-DLALSLFREMTQ 352
           L  ++     A   +E+L  M  +G   P+  +++ ++N   K GK  D AL +   ++ 
Sbjct: 276 LIELVCKYCGAARALEVLEDMAMEGCY-PDIVTYNSLVNLTSKQGKYEDTALVILNLLSH 334

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   N   YN LI  L N    +E  ++L+ M E+   PTH T N +   LC+   +  
Sbjct: 335 -GMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDR 393

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A++    M  +   P +     L+  LCK G   E  + L  +V     P +V Y+  I 
Sbjct: 394 AISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVID 453

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL  +  ++ A EL+ ++   G  PD + ++ +  G C+A ++ EA +L  EM  K    
Sbjct: 454 GLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRI 513

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
               Y  +I G C+   +D A+  L  M++ +  +PD   Y+ LI  +   G
Sbjct: 514 KNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQC-NPDERIYSALIKAVADGG 564



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 176/409 (43%), Gaps = 52/409 (12%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           C +++R  +  G +D+A   L  M+                 G V P+T +++++I  L 
Sbjct: 168 CTNLIRGFIRKGLVDEACKTLNKMV---------------MSGGV-PDTITYNMVIGGLC 211

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G+L  AL L  +M+  GC  +   YN++I  L +     ++    R+    G  P   
Sbjct: 212 KNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLI 271

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T   +   +C+      AL ++  M ++G  P +     L+    K GK  +    + ++
Sbjct: 272 TYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNL 331

Query: 456 VQEGFLPDIVCYSAAIGGLI---------DIKRV-------------------------- 480
           +  G  P+ V Y+  I  LI         DI ++                          
Sbjct: 332 LSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLL 391

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D A+  +  +    C PD++ YN ++SGLCK   + E   L N ++     P + TYN++
Sbjct: 392 DRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIV 451

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           I+G  + G+++ A      M++K    PD IT+++L  G C A + ++A  L  EM  K 
Sbjct: 452 IDGLARLGSMESAKELYDEMVDK-GIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKE 510

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
                  +  +I GLC+  +   A+    +M +    PD  ++ ALI A
Sbjct: 511 QRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKA 559



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 17/424 (4%)

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDD 163
           T L++ +   G  D+A    N+++  G V D   +++++    K G +  A +L+E M  
Sbjct: 169 TNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSL 228

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
                +  T+  +I     K   ++A+  +    + G       Y V+I  +CK      
Sbjct: 229 SGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAAR 288

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           AL++  +M   G  PD    + L+   S +G+        +ED  +  + LL + +    
Sbjct: 289 ALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGK--------YEDTALVILNLLSHGMQPNA 340

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS-SFDIIINTLLKDGKLDL 342
           V+       YN L   +      D   ++L I   T SP T  +++I++N L K G LD 
Sbjct: 341 VT-------YNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDR 393

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+S +  M    C  ++  YN L+ GLC    ++E  +LL  +  +   P   T N +  
Sbjct: 394 AISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVID 453

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            L R   +  A  L  +M  +G  P    ++ L    C+  +  EA   L +M  +    
Sbjct: 454 GLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRI 513

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
               Y   I GL   K+VD+A+++   +    C PD   Y+ +I  +     + EA DL 
Sbjct: 514 KNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLH 573

Query: 523 NEMI 526
             +I
Sbjct: 574 QTLI 577



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 181/444 (40%), Gaps = 108/444 (24%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEA-NMLFDQVKREGLCVPNNYSYNCLL 73
           L +D+  S C  SP A+ +  +IRCL   G   +A N   DQ+++   C P   +Y  L+
Sbjct: 222 LVEDMSLSGC--SPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKG--CPPYLITYTVLI 277

Query: 74  EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF-DKALSVFNEIIDHGW 132
           E +CK C        L++M   G   D  T   L+ +    G++ D AL + N ++ HG 
Sbjct: 278 ELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILN-LLSHG- 335

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
                                            ++ N  T+  LIH  +     D+   +
Sbjct: 336 ---------------------------------MQPNAVTYNTLIHSLINHGYWDEVDDI 362

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
              M ++        Y++++ GLCK+  L+ A+  YS M     +PD    + L++    
Sbjct: 363 LKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCK 422

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
           EG                                                    D G+++
Sbjct: 423 EG--------------------------------------------------FIDEGIQL 432

Query: 313 LMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           L +  GT  SP   +++I+I+ L + G ++ A  L+ EM   G + +   +++L  G C 
Sbjct: 433 LNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCR 492

Query: 372 SNRLEESYELLRE--MEESGFKPTHFTLNSMFRC----LCRRQDVVGALNLVRKMRVQGH 425
           +++LEE+ ELL+E  M+E   K      N+ +RC    LCR++ V  A+ ++  M V+G 
Sbjct: 493 ADQLEEATELLKEMSMKEQRIK------NTAYRCVILGLCRQKKVDIAIQVLDLM-VKGQ 545

Query: 426 -EPWVKHNTLLIKELCKHGKAMEA 448
             P  +  + LIK +   G   EA
Sbjct: 546 CNPDERIYSALIKAVADGGMLKEA 569



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 2/198 (1%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            L+  L   GL++ A   +  +  E  C P+  +YN LL  LCK   +D     L  +  
Sbjct: 380 ILLNGLCKSGLLDRAISFYSTMVTEN-CSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVG 438

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDK 153
                   T   ++      G  + A  +++E++D G + DE   S L   F +  ++++
Sbjct: 439 TSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEE 498

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A EL++ M     R+    +  +I G  ++ +VD A+Q+ D M K     D  +Y  +I 
Sbjct: 499 ATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIK 558

Query: 214 GLCKNKQLEMALQLYSEM 231
            +     L+ A  L+  +
Sbjct: 559 AVADGGMLKEANDLHQTL 576


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 173/342 (50%), Gaps = 1/342 (0%)

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
           S F   + T  K+  +  A+ L  EM   G   +V  YN LI+G+C   RL+E+ + L  
Sbjct: 83  SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M   G +P   T N + R +C     + A  L+  M  +G  P V    +LI  LC+ G 
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A   L  M   G  P+ + Y+  + G    K++D A+E    + + GC PD+V YN 
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +++ LCK  +V  A ++ N++ +KG  P + TYN +I+G  K G  ++A+  L  M  ++
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM-RRK 321

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              PD+ITY++L+ GL   G+ D+AI  ++++E  G  PN IT+ +++ GLCK  +   A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +     M  K  KP    +  LI     E     A ++L E+
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 2/299 (0%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           KG+  P+  +++++IN + K+G+LD A+     M   GC  NV  +N ++  +C++ R  
Sbjct: 111 KGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 169

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++ +LL +M   G  P+  T N +   LCR+  +  A++++ KM + G  P       L+
Sbjct: 170 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 229

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK  K   A  +L  MV  G  PDIV Y+  +  L    +VD+A+E+   + + GC 
Sbjct: 230 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 289

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P ++ YN +I GL K  +   A  L +EM  KGL P + TY+ L++G  + G +D+A+  
Sbjct: 290 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 349

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
               LE     P+ ITY +++ GLC + + D AI     M  K C P   T+  LI G+
Sbjct: 350 FHD-LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 407



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 186/403 (46%), Gaps = 55/403 (13%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F   +    K+S V +A++L D+M   G   D   Y+V+I G+CK  +L+ A++  + M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
             G  P+      +IT                            N I+R + S G    A
Sbjct: 145 SYGCQPN------VITH---------------------------NIILRSMCSTGRWMDA 171

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
             LL  M++               KG  SP+  +F+I+IN L + G L  A+ +  +M  
Sbjct: 172 EKLLSDMLR---------------KG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 215

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC  N   YN L+ G C   +++ + E L  M   G  P   T N++   LC+   V  
Sbjct: 216 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 275

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+ ++ ++  +G  P +     +I  L K GK   A + L +M ++G  PDI+ YS+ + 
Sbjct: 276 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 335

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           GL    +VD A++ F D+   G  P+ + YN I+ GLCK+++   A D    MI+K   P
Sbjct: 336 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 395

Query: 533 SVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDV 570
           + ATY +LI G    G   +A+     LC SR L K+S +  V
Sbjct: 396 TEATYTILIEGIAYEGLAKEALDLLNELC-SRGLVKKSSAEQV 437



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 181/400 (45%), Gaps = 52/400 (13%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           CF S     F ++       V +A  L D+++ +G   P+  +YN L+  +CK   +D  
Sbjct: 79  CF-SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKG-SKPDVVTYNVLINGICKEGRLDEA 136

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
              L  M  YG   +  T   +L+  C++G++  A  + ++++  G     V F+IL+  
Sbjct: 137 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 196

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             + G + +A +++E+M       N  ++  L+HGF K+ ++D+A++  D M   G   D
Sbjct: 197 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 256

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y+ ++  LCK+ ++++A+++ +++   G +P       LIT                
Sbjct: 257 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP------VLITY--------------- 295

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                       N+++  L   G  ++A  LL  M +               KG + P+ 
Sbjct: 296 ------------NTVIDGLSKVGKTERAIKLLDEMRR---------------KG-LKPDI 327

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  +++ L ++GK+D A+  F ++  +G   N   YN+++ GLC S + + + + L  
Sbjct: 328 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 387

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           M     KPT  T   +   +        AL+L+ ++  +G
Sbjct: 388 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 37/256 (14%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L  D+++  C  S      LI  L   GL+  A  + +++   G C PN+ SYN LL   
Sbjct: 174 LLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGF 232

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG----- 131
           CK   +D     L  M   G   D  T   LL   C  G+ D A+ + N++   G     
Sbjct: 233 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 292

Query: 132 ---------------------WVDEH----------VFSILLVAFSKWGEVDKACELIER 160
                                 +DE            +S L+   S+ G+VD+A +    
Sbjct: 293 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHD 352

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           ++   IR N  T+  ++ G  K  + D+A+     M         A Y ++I G+     
Sbjct: 353 LEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGL 412

Query: 221 LEMALQLYSEMKGSGI 236
            + AL L +E+   G+
Sbjct: 413 AKEALDLLNELCSRGL 428



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 3/193 (1%)

Query: 20  DVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
           D++ SR C+        L+  L   G V+ A  + +Q+  +G C P   +YN +++ L K
Sbjct: 246 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNTVIDGLSK 304

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV- 137
               +     L EM+  G   D  T + L+      G+ D+A+  F+++   G     + 
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ +++   K  + D+A + +  M     +  E T+ +LI G   +    +AL L +++ 
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 424

Query: 198 KSGFASDAAMYDV 210
             G    ++   V
Sbjct: 425 SRGLVKKSSAEQV 437


>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
 gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
          Length = 448

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 220/448 (49%), Gaps = 23/448 (5%)

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE-- 253
           M + G   D   Y++++ GL K   ++ A  + S M G G  PD      L+    +   
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 254 -GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
            GE+  L +E+ E   V    L  N+I++ L+ +G  D  +            +D+ V  
Sbjct: 61  VGEVCELFQEL-ESNGVAVGMLAYNAILKALMCSGDFDGGFKF----------SDIAVG- 108

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                G++ P+  ++  +++ L+K GK   A  +  EM +   + +   Y  LI  LC  
Sbjct: 109 ----DGSL-PHVLAYKTMLDCLIKTGKTREASEVVGEMIK-KSVPDGMTYTALISVLCKH 162

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
           NR +++ ++   M E    P      S+    CR + + GA  L  +M  +G+ P     
Sbjct: 163 NRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTY 222

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC- 491
            LL++ LC  G++  A+   + M   G +PD   Y++ I G     R+  A  LF+++  
Sbjct: 223 GLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLE 282

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
                 D   YN++I GLC+A +V EA ++   M+ KG IP++ TYN LI G+ K+  +D
Sbjct: 283 GEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVD 342

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L L R +E++  SP+ + Y+T IDGLC  G+ ++A   + +  E+GC P+ +T+ AL
Sbjct: 343 KA-LQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNAL 401

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           I GL   +R   A   +R M E+G   D
Sbjct: 402 IRGLFGANRMDEAHRLYREMGERGYIAD 429



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 36/366 (9%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P+  S+++++  L K   +D A ++   M   G   +V     L+D  C   R+ E  
Sbjct: 6   VVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVC 65

Query: 380 ELLREME------------------------ESGFK-----------PTHFTLNSMFRCL 404
           EL +E+E                        + GFK           P      +M  CL
Sbjct: 66  ELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCL 125

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +      A  +V +M ++   P     T LI  LCKH +A +A +    MV++  +P++
Sbjct: 126 IKTGKTREASEVVGEM-IKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNV 184

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
             Y++ +      +++D A  LF ++   G  P    Y +++  LC   R   A D+ + 
Sbjct: 185 DVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSS 244

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           M ++G +P   TY  LI G C +G I +A +    +LE E    D   Y  LI+GLC A 
Sbjct: 245 MRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRAS 304

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           + ++A+ +   M +KGC P   T+ ALI G  K +    AL  FR M+EKG  P+  ++ 
Sbjct: 305 KVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYS 364

Query: 645 ALISAF 650
             I   
Sbjct: 365 TFIDGL 370



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 184/435 (42%), Gaps = 59/435 (13%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           +  ++ +L+ G  K S VD+A  +   M   G+  D     +++   C+ K++    +L+
Sbjct: 9   DRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELF 68

Query: 229 SEMKGSGITPDFEILSKLITS--CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
            E++ +G+       + ++ +  CS + +      +I          L   +++  L+  
Sbjct: 69  QELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKT 128

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
           G   +A  ++  MIK                    P+  ++  +I+ L K  + D A+ +
Sbjct: 129 GKTREASEVVGEMIK-----------------KSVPDGMTYTALISVLCKHNRADDAMKV 171

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F  M +   + NV +Y +L+   C + +L+ +Y L  EM + G+ P+  T   + RCLC 
Sbjct: 172 FDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCN 231

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNT--------------------------------- 433
                 A ++   MR +GH P    NT                                 
Sbjct: 232 GGRSYLAYDIHSSMRSRGHVP--DENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLD 289

Query: 434 -----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                +LI+ LC+  K  EA      MV +G +P +  Y+A I G      VD AL+LFR
Sbjct: 290 AGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFR 349

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G  P+ + Y+  I GLCK  ++ EA + F + + +G +P   TYN LI G   + 
Sbjct: 350 AMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGAN 409

Query: 549 NIDQAMLCLSRMLEK 563
            +D+A      M E+
Sbjct: 410 RMDEAHRLYREMGER 424



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 196/442 (44%), Gaps = 25/442 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           VP+  SYN L+  L K  SVD     L  M   G+  D  T   L+  +C   +  +   
Sbjct: 7   VPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCE 66

Query: 123 VFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +F E+  +G  V    ++ +L A    G+ D   +  +         +   +  ++   +
Sbjct: 67  LFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLI 126

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +  +A ++  +M K     D   Y  +I  LCK+ + + A++++  M    I P+ +
Sbjct: 127 KTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVD 185

Query: 242 ILSKLITS-CSD---EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           + + L+ + C     +G   L V+ I      +  T     ++R L + G    AY++  
Sbjct: 186 VYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTY--GLLLRCLCNGGRSYLAYDIHS 243

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           +M                 +G V P+ +++  +I      G++  A  LF+E+ +    Q
Sbjct: 244 SMRS---------------RGHV-PDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQ 287

Query: 358 -NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +  +YN LI+GLC ++++EE+ E+   M + G  PT  T N++     +  +V  AL L
Sbjct: 288 LDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQL 347

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
            R M  +G  P     +  I  LCK GK  EA  F    V+ G +PD V Y+A I GL  
Sbjct: 348 FRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFG 407

Query: 477 IKRVDLALELFRDICAHGCCPD 498
             R+D A  L+R++   G   D
Sbjct: 408 ANRMDEAHRLYREMGERGYIAD 429



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 36/201 (17%)

Query: 8   ARRIAPLRVLAQDVVKS-RCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           A RI   +VL ++V++  +  +  G    LI  L     VEEA  +   +  +G C+P  
Sbjct: 267 AGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKG-CIPTL 325

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
            +YN L+    K+  VD      + M++ G+  +    +  +   C  G+ ++A   F +
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385

Query: 127 IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
            ++ G V ++V                                  T+  LI G    +R+
Sbjct: 386 SVERGCVPDNV----------------------------------TYNALIRGLFGANRM 411

Query: 187 DKALQLFDKMTKSGFASDAAM 207
           D+A +L+ +M + G+ +D ++
Sbjct: 412 DEAHRLYREMGERGYIADRSL 432


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 279/607 (45%), Gaps = 48/607 (7%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           +N L+   C++  +   E  L+ +   G   D  T   L+  YC  G+ + A  +   + 
Sbjct: 127 HNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLEDARLLVASMP 185

Query: 129 DHGWVDEHVFSILLVAF---SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
                + + ++ LL       +WG+ +   EL+E M   +   ++ TF +LIH F +   
Sbjct: 186 PAP--NSYAYNTLLKGLCSAKQWGDAE---ELVEEMTRNDSPPDDLTFGMLIHSFCQSGL 240

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-FEILS 244
           VD+A+ + D+M+K G    A +Y+ II    +  +++ AL L+S M      PD F   +
Sbjct: 241 VDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNA 297

Query: 245 KLITSC-----SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
            L   C      D GEL  + + + +D   + +T   N+++  L   G +D A  ++  M
Sbjct: 298 VLKGLCRAERWEDAGEL--ITEMVRKDCSPDEVTF--NTVISFLCHKGLVDCALEVVDQM 353

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
            K                    P+  ++  +IN   + G ++ AL L R M    C  N 
Sbjct: 354 PKY----------------GRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNT 394

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y +++ GLC   + E+  +L+ EM  +   P       +  CLC+R  V   L ++++
Sbjct: 395 VCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQE 454

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +   G  P V   T L+    ++G+  ++ +    M  +   P+ V Y+  + GL  ++ 
Sbjct: 455 VPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCK---PNTVTYNYVLMGLCKVEL 511

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            + A +L  ++    C P+ + ++I+IS LC+   V  A D+F +M   G  P+V  Y+ 
Sbjct: 512 WEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYST 571

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           L NG  + G +D A+    ++L   S   D I Y++ + GLC A   +DA  L  EM  K
Sbjct: 572 LNNGLSEKGCVDNAL----KLLNNMSCKADTICYSSALKGLCRAELWEDAGELIVEMFRK 627

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
            C P+ +TF  +IT LC+      A     +M +    P++ ++ +LI+ F    +   A
Sbjct: 628 DCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDA 687

Query: 660 FEVLKEM 666
            ++L+ M
Sbjct: 688 LKLLRSM 694



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 251/537 (46%), Gaps = 34/537 (6%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G +E+A +L   +       PN+Y+YN LL+ LC +      E  ++EM       D  T
Sbjct: 172 GRLEDARLLVASMPP----APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLT 227

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
              L+  +C SG  D+A+ + + +   G      V++ ++  F++ G V +A  L   M 
Sbjct: 228 FGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP 287

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               + +  ++  ++ G  +  R + A +L  +M +   + D   ++ +I  LC    ++
Sbjct: 288 ---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVD 344

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            AL++  +M   G  PD    S LI + S++G +   + E+      +  T+   S+++ 
Sbjct: 345 CALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDAL-ELLRSMPCSPNTVCYKSVLKG 403

Query: 283 LVSNGSIDQAYNLLQAMIKGE------------------PIADVGVEMLM-IFKGTVSPN 323
           L  +G  +    L+  M++ +                   + D G+E+L  +     SP+
Sbjct: 404 LCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPD 463

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
              +  ++N   + G++D +L LF+ MT   C  N   YN ++ GLC     E++ +L+ 
Sbjct: 464 VVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLID 520

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
           EM      P   T + +   LC++  V  A+++  KM++ G  P V   + L   L + G
Sbjct: 521 EMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKG 580

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
               A + L +M  +    D +CYS+A+ GL   +  + A EL  ++    C PD V ++
Sbjct: 581 CVDNALKLLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFS 637

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           III+ LC+   V  A ++ + M+     P++  Y+ LING+ + G+++ A+  L  M
Sbjct: 638 IIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 15/347 (4%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V P   + +  ++  ++ G LD AL L   M++   +    L   LI  LC + RL ++ 
Sbjct: 57  VPPRRGAANDRLHHFIRLGDLDAALQLVGSMSEPPAVVPCTL---LIKKLCAAGRLADAE 113

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +LR   E+     H TL + +   CR   +  A  ++R +   G    V +NTL I   
Sbjct: 114 GVLR-ASEAADAVDHNTLVAGY---CRAGRLADAERMLRSLAASGAADVVTYNTL-IAGY 168

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C+ G+  +A   +  M      P+   Y+  + GL   K+   A EL  ++  +   PD 
Sbjct: 169 CRGGRLEDARLLVASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDD 225

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + + ++I   C++  V  A  + + M   G  P    YN +I+ + + G + +A+   S 
Sbjct: 226 LTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSC 285

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           M  K    PD+ +Y  ++ GLC A R +DA  L  EM  K C+P+ +TF  +I+ LC   
Sbjct: 286 MPCK----PDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKG 341

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               AL     M + G KPD F + ALI+AF  +     A E+L+ M
Sbjct: 342 LVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM 388



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 30/402 (7%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
           L RA R      L  ++V+  C  SP  + F  +I  L   GLV+ A  + DQ+ + G  
Sbjct: 302 LCRAERWEDAGELITEMVRKDC--SPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGR- 358

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+N++Y+ L+ A  +      VE  L+ ++      +      +L+  C  GQ++    
Sbjct: 359 KPDNFTYSALINAFSEQ---GCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQ 415

Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  E++ +    DE VF +++    + G VD   E+++ + +     +   +  L++GF 
Sbjct: 416 LIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFA 475

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +  RVD +L+LF  MT      +   Y+ ++ GLCK +  E A +L  EM G    P+  
Sbjct: 476 EYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEM 532

Query: 242 ILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             S LI+S   +G  E  + V E  +        ++ +++   L   G +D A  LL  M
Sbjct: 533 TFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM 592

Query: 300 ----------------IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                            + E   D G  ++ +F+    P+  +F III  L + G ++ A
Sbjct: 593 SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYA 652

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
             +   M +  C  N+ +Y++LI+G      LE++ +LLR M
Sbjct: 653 TEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 261/578 (45%), Gaps = 26/578 (4%)

Query: 69  YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           Y  +LE L K+         L  M+  G        + ++  Y  +GQ   AL V   ++
Sbjct: 210 YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLT-LM 268

Query: 129 DHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
               V+ ++   +  +  F +   ++KA   +ERM    I  N  T+  +I G+    RV
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPD---FEI 242
           ++A++L + M   G   D   Y  I+G LCK K++     L  +M K  G+ PD   +  
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L  ++T      E    +K+  E +      L  ++I+  L   G + +A +L+  M+  
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQE-KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS- 446

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                         KG   P+  ++  ++N   + G++D A  L + M   G   N   Y
Sbjct: 447 --------------KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 492

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             L++G+C + +  E+ E++   EE  + P   T + +   L R   +  A ++VR+M +
Sbjct: 493 TALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G  P      LL++ LC+ G+  EA +F+ + + +G   ++V ++  I G      +D 
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL +  D+       DV  Y  ++  L K  R+AEA +L  +M+ KG+ P+  TY  +I+
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            +C+ G +D  +  L +M+ ++        Y  +I+ LC+ G+ ++A  L  ++      
Sbjct: 673 RYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASR 729

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
            +  T  AL+ G  K   P +A      M  + + PD+
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 767



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 200/443 (45%), Gaps = 46/443 (10%)

Query: 268 DVNTMTLLCNSIMRILV---SNGSIDQAYNLLQAMI---KGEPIADVGVEMLMIFKGTVS 321
           +V + T LC    R+LV     G         + M+   +   + D    + ++ +  V 
Sbjct: 215 EVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVE 274

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN    +  I+  ++  +L+ AL     M  +G + NV  YN +I G C+ +R+EE+ EL
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEP-WVKHNTLLIKEL 439
           L +M   G  P   +  ++   LC+ + +V   +L++KM +  G  P  V +NTL I  L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTL-IHML 393

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP-D 498
            KH  A EA  FL D  ++GF  D + YSA +  L    R+  A +L  ++ + G CP D
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD 453

Query: 499 VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
           VV Y  +++G C+   V +A+ L   M T G  P+  +Y  L+NG C++G   +A   ++
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513

Query: 559 RMLEKESGSPDVITYTTLIDG-----------------------------------LCIA 583
            M E+   SP+ ITY+ ++ G                                   LC  
Sbjct: 514 -MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GR  +A     E   KGCA N + F  +I G C+ D   AAL     M       D+F +
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             L+     +     A E++K+M
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKM 655



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 36/346 (10%)

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            +  +Y ++++ L  +   + S  +L  M+  G   T    + +     R   +  AL +
Sbjct: 205 HDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKV 264

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
           +  M+  G EP +      I    +  +  +A RFL  M   G +P++V Y+  I G  D
Sbjct: 265 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 324

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVA 535
           + RV+ A+EL  D+ + GC PD V+Y  I+  LCK +R+ E  DL  +M  + GL+P   
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384

Query: 536 TYNLLI-----------------------------------NGWCKSGNIDQAMLCLSRM 560
           TYN LI                                   +  CK G + +A   ++ M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           L K    PDV+TYT +++G C  G  D A  L   M   G  PN +++ AL+ G+C+  +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A     M +E    P+   +  ++     E     A +V++EM
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 113/533 (21%), Positives = 221/533 (41%), Gaps = 34/533 (6%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           +E+A    ++++  G+ VPN  +YNC++   C    V+     L++M   G   DK +  
Sbjct: 293 LEKALRFLERMQVVGI-VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351

Query: 106 PLLQVYCNSGQFDKALSVFNEII-DHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
            ++   C   +  +   +  ++  +HG V + V ++ L+   +K    D+A   ++   +
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF-ASDAAMYDVIIGGLCKNKQLE 222
              R+++  +  ++H   K+ R+ +A  L ++M   G    D   Y  ++ G C+  +++
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNTMTLLC 276
            A +L   M   G  P+    + L+      G      E+  + +E W   +  T ++  
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV-- 529

Query: 277 NSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
             IM  L   G + +A ++++ M+ KG             F G V  N     +++ +L 
Sbjct: 530 --IMHGLRREGKLSEACDVVREMVLKG------------FFPGPVEIN-----LLLQSLC 570

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           +DG+   A     E    GC  NV  +  +I G C ++ L+ +  +L +M         F
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 630

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T  ++   L ++  +  A  L++KM  +G +P       +I   C+ GK  +    L  M
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           +       I  Y+  I  L  + +++ A  L   +       D      ++ G  K    
Sbjct: 691 ISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVP 748

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
             A  +   M  + LIP V     L       G +D+A   + R++E+   SP
Sbjct: 749 LSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 209/494 (42%), Gaps = 64/494 (12%)

Query: 45  LVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
           +VE  +++    K  GL VP+  +YN L+  L K    D     LK+ Q+ G+  DK   
Sbjct: 363 IVEVRDLMKKMAKEHGL-VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421

Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMD 162
           + ++   C  G+  +A  + NE++  G     V  ++ ++  F + GEVDKA +L++ M 
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               + N  ++  L++G  +  +  +A ++ +   +  ++ ++  Y VI+ GL +  +L 
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A  +  EM   G  P                E+ LL++ +  D                
Sbjct: 542 EACDVVREMVLKGFFP-------------GPVEINLLLQSLCRD---------------- 572

Query: 283 LVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
               G   +A   ++  + KG  I                 N  +F  +I+   ++ +LD
Sbjct: 573 ----GRTHEARKFMEECLNKGCAI-----------------NVVNFTTVIHGFCQNDELD 611

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            ALS+  +M  I    +VF Y  L+D L    R+ E+ EL+++M   G  PT  T  ++ 
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              C+   V   + ++ KM +   +    +N  +I++LC  GK  EA   L  +++    
Sbjct: 672 HRYCQMGKVDDLVAILEKM-ISRQKCRTIYNQ-VIEKLCVLGKLEEADTLLGKVLRTASR 729

Query: 462 PDI-VCYSAAIGGLIDIKRVDLALELFRDICA---HGCCPDVVAYNIIISGLCKAQRVAE 517
            D   CY+   G L    +  + L  ++  C        PDV     +   L    +V E
Sbjct: 730 SDAKTCYALMEGYL----KKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDE 785

Query: 518 AEDLFNEMITKGLI 531
           A+ L   ++ +G I
Sbjct: 786 ADKLMLRLVERGHI 799



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/432 (21%), Positives = 182/432 (42%), Gaps = 54/432 (12%)

Query: 33  LGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
           LG+  ++  L   G + EA  L +++  +G C P+  +Y  ++   C+   VD  +  L+
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWG 149
            M  +G   +  + T LL   C +G+  +A  + N   +H W    + +S+++    + G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++ +AC+++  M             +L+    +  R  +A +  ++    G A +   + 
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I G C+N +L+ AL +  +M              LI   +                DV
Sbjct: 599 TVIHGFCQNDELDAALSVLDDM-------------YLINKHA----------------DV 629

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
            T T L ++    L   G I +A  L++                M+ KG + P   ++  
Sbjct: 630 FTYTTLVDT----LGKKGRIAEATELMKK---------------MLHKG-IDPTPVTYRT 669

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           +I+   + GK+D  +++  +M  I   +   +YN +I+ LC   +LEE+  LL ++  + 
Sbjct: 670 VIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTA 727

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
            +    T  ++     ++   + A  +  +M  +   P VK    L K L   GK  EA 
Sbjct: 728 SRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEAD 787

Query: 450 RFLTDMVQEGFL 461
           + +  +V+ G +
Sbjct: 788 KLMLRLVERGHI 799


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 231/512 (45%), Gaps = 51/512 (9%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           L +VY ++  FD +L VF+     G+ +DE      L+A  + G ++   E + +M D  
Sbjct: 128 LFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSG 187

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I +   ++  ++ G  KK  V +A  L D++   GF      Y+ ++ G           
Sbjct: 188 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG----------- 236

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
             Y E+K  G   +                L+L+ K +  D +V T T+L     R    
Sbjct: 237 --YIEIKDVGGVNEI---------------LSLMEKNVV-DYNVTTYTMLIEWYSR---- 274

Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           +  I++A  L   M+K               KG + P+   +  IIN   K G +  A  
Sbjct: 275 SSKIEEAEKLFDEMLK---------------KG-IEPDVYIYTSIINWNCKFGNMKRAFV 318

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           LF EMT+   + N + Y  LI+G C +  ++ +  ++ +M+  G        N++    C
Sbjct: 319 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 378

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
           ++  +  AL L   M+ +G E       ++    C+  +  EA R L  M + G  P++V
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            +S  I      +    A  LF+ +   G  P VV YN  I   CK  ++ EA  L NEM
Sbjct: 439 SFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEM 498

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
             +GL+P   TY  LI+G   SGN+D+A+   + M  +   + +V+TYT +I GL   GR
Sbjct: 499 QERGLMPDTYTYTSLIDGERASGNVDRALELFNEM-PQLGLNRNVVTYTVIISGLSKDGR 557

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            D+A  L++EM ++G  P+   + +LI  L K
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 236/489 (48%), Gaps = 21/489 (4%)

Query: 171 KTFC-VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           + FC +L   ++     D +L++FD   K GF  D       +  L ++  +E+ ++   
Sbjct: 122 EKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLR 181

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
           +M  SGI       + ++     +GE+ +  K + ++       L+C      +++    
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEV-VRAKALMDE-------LVCKGFKPSVIT---- 229

Query: 290 DQAYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
              YN LL   I+ + +  V   + ++ K  V  N +++ ++I    +  K++ A  LF 
Sbjct: 230 ---YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFD 286

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EM + G   +V++Y ++I+  C    ++ ++ L  EM E    P  +T  ++    C+  
Sbjct: 287 EMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAG 346

Query: 409 DVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           ++  A  +V  M+ +G +   V  NTL+    CK G   EA R    M Q+GF  D    
Sbjct: 347 EMKAAEMMVNDMQSKGVDVNRVIFNTLM-DGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 405

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +    G     R + A  L   +   G  P+VV+++I+I   CK Q  AEA  LF  M  
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 465

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KG  PSV TYN  I  +CK G +++A   ++ M E+    PD  TYT+LIDG   +G  D
Sbjct: 466 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER-GLMPDTYTYTSLIDGERASGNVD 524

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            A+ L+NEM + G   N +T+  +I+GL K  R   A   +  M ++G+ PD  ++ +LI
Sbjct: 525 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584

Query: 648 SAFLSELNP 656
           ++ L ++ P
Sbjct: 585 AS-LHKVGP 592



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 223/498 (44%), Gaps = 51/498 (10%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           +FD  +++G  +     +  LL AL +S +++L    L++M D G      + T ++   
Sbjct: 144 VFDYARKKGFEIDERSCFEFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGL 202

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+  +A ++ +E++  G+    + ++ LL  + +  +V    E++  M+   +  N 
Sbjct: 203 CKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNV 262

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+ +LI  + + S++++A +LFD+M K G   D  +Y  II   CK   ++ A  L+ E
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    + P+      LI      GE+                               + +
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMK------------------------------AAE 352

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
              N +Q+                  KG V  N   F+ +++   K G +D AL L   M
Sbjct: 353 MMVNDMQS------------------KG-VDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            Q G   + F  N +  G C SNR EE+  LL  MEE G  P   + + +    C+ Q+ 
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  L + M  +G  P V      I+  CK GK  EA++ + +M + G +PD   Y++ 
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSL 513

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I G      VD ALELF ++   G   +VV Y +IISGL K  R  EA  L++EM  +G+
Sbjct: 514 IDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGI 573

Query: 531 IPSVATYNLLINGWCKSG 548
           +P    Y+ LI    K G
Sbjct: 574 VPDDGIYSSLIASLHKVG 591



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 21/357 (5%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           N  +Y  L+E   +S  ++  E    EM   G   D Y  T ++   C  G   +A  +F
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLF 320

Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           +E+ +   V + + +  L+    K GE+  A  ++  M    + +N   F  L+ G+ KK
Sbjct: 321 DEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKK 380

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---F 240
             +D+AL+L + M + GF  DA   ++I  G C++ + E A +L   M+  G+ P+   F
Sbjct: 381 GMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSF 440

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            IL  +     +  E   L K + E +      +  N+ +      G +++AY L+  M 
Sbjct: 441 SILIDIYCKEQNFAEARRLFK-VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +               +G + P+T ++  +I+     G +D AL LF EM Q+G  +NV 
Sbjct: 500 E---------------RGLM-PDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVV 543

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
            Y  +I GL    R +E+++L  EM + G  P     +S+   L +   +V  L  V
Sbjct: 544 TYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENV 600



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 2/214 (0%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+++EA  L + ++++G  + + ++ N +    C+S   +  +  L  M++ G   +  +
Sbjct: 381 GMIDEALRLQNIMQQKGFEI-DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 439

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
            + L+ +YC    F +A  +F  +   G     V ++  +  + K G++++A +LI  M 
Sbjct: 440 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
           +  +  +  T+  LI G      VD+AL+LF++M + G   +   Y VII GL K+ + +
Sbjct: 500 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 559

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            A +LY EM   GI PD  I S LI S    G L
Sbjct: 560 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 222/471 (47%), Gaps = 40/471 (8%)

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            VD  +  F +M     A     +  I+  L K K     + L+ +++ +GI P+   LS
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 245 KLITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            LI      G++    ++  K +      NT+TL   ++++    N  + +A +      
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITL--TTLVKGFCLNHKVKEALHF----- 163

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
             + +  +G             N  S+  +IN L K G+   AL + R++       +V 
Sbjct: 164 -HDHVLALGFHF----------NQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVV 212

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
           +Y+ +IDGLC    + ++YEL  EM      PT  TLNS+    C       A  L+R+M
Sbjct: 213 MYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREM 272

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
            ++   P V    +L+  LCK GK  EA   +  M++EG +PD+V YS+ + G   +  V
Sbjct: 273 VLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEV 332

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           + A  +               Y+I+I+G CK + V +A  LF EM  + + P   TYN L
Sbjct: 333 NKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSL 377

Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           I+G CKSG I  A   +  M  ++SG P D+ITY +LID LC     D AI L  +++++
Sbjct: 378 IDGLCKSGRISYAWELVDEM--RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQ 435

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           G   +  T+  LI GLCK  R + A V F+ +  KG    ++ +  +I+  
Sbjct: 436 GIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGL 486



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 244/539 (45%), Gaps = 68/539 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+   +  +L +L K      V     +++  G   +  +L+ L+  YC+ GQ   A S+
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F +I+  G+    +  + L+  F    +V +A    + +       N+ ++  LI+G  K
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 ALQ+  ++     ++D  MY  II GLCK+K +  A +LYSEM    I+P    
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L+ LI      G+                                   +A+ LL+ M+  
Sbjct: 249 LNSLIYGYCIVGQF---------------------------------KEAFGLLREMVLK 275

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            ++P+  +F+I+++ L K+GK+  A S    M + G M +V  Y
Sbjct: 276 N----------------INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTY 319

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           ++L+DG C  N + ++  +   +  +GF              C+ + V  AL+L  +MR 
Sbjct: 320 SSLMDGYCLVNEVNKAKHVY-SIVINGF--------------CKIKMVDKALSLFYEMRC 364

Query: 423 QGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           +   P  V +N+L I  LCK G+   A+  + +M   G   DI+ Y++ I  L     VD
Sbjct: 365 RRIAPDTVTYNSL-IDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVD 423

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+ L + I   G   D+  YNI+I GLCK  R+ +A+ +F +++ KG   +V TY ++I
Sbjct: 424 KAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMI 483

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           NG C  G +++A   LS+M E     PD +T  T+I  L    + + A  L  EM  +G
Sbjct: 484 NGLCLEGLLNEAETLLSKM-EDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 214/481 (44%), Gaps = 31/481 (6%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF Q++  G+  PN  S + L+   C    +        ++   G+  +  TLT L++ +
Sbjct: 93  LFYQLEFNGI-KPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGF 151

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C + +  +AL   + ++  G+    V +  L+    K GE   A +++ +++   +  + 
Sbjct: 152 CLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDV 211

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             +  +I G  K   V+ A +L+ +M     +      + +I G C   Q + A  L  E
Sbjct: 212 VMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLRE 271

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           M    I PD    + L+ +   EG++        ++       ++   +M  +V+  S+ 
Sbjct: 272 MVLKNINPDVYTFNILVDALCKEGKI--------KEAKSGIAVMMKEGVMPDVVTYSSLM 323

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
             Y L+  + K + +                     + I+IN   K   +D ALSLF EM
Sbjct: 324 DGYCLVNEVNKAKHV---------------------YSIVINGFCKIKMVDKALSLFYEM 362

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
                  +   YN+LIDGLC S R+  ++EL+ EM +SG      T NS+   LC+   V
Sbjct: 363 RCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHV 422

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ LV+K++ QG +  +    +LI  LCK G+  +A     D++ +G+   +  Y+  
Sbjct: 423 DKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIM 482

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL     ++ A  L   +  +GC PD V    II  L +  +   AE L  EMI +GL
Sbjct: 483 INGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542

Query: 531 I 531
           +
Sbjct: 543 L 543



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 175/367 (47%), Gaps = 23/367 (6%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+   F  I+++L+K       +SLF ++   G   N+   + LI+  C+  ++  ++ 
Sbjct: 68  APSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFS 127

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKEL 439
           +  ++ + G+ P   TL ++ +  C    V  AL+    +   G H   V + TL I  L
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTL-INGL 186

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +  +    D+V YS  I GL   K V+ A EL+ ++      P V
Sbjct: 187 CKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTV 246

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V  N +I G C   +  EA  L  EM+ K + P V T+N+L++  CK G I +A   ++ 
Sbjct: 247 VTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAV 306

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRP--------------------DDAIMLWNEMEEK 599
           M+ KE   PDV+TY++L+DG C+                        D A+ L+ EM  +
Sbjct: 307 MM-KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCR 365

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
             AP+ +T+ +LI GLCK  R   A      M++ G   D+  + +LI A     +   A
Sbjct: 366 RIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKA 425

Query: 660 FEVLKEM 666
             ++K++
Sbjct: 426 IALVKKI 432



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 155/347 (44%), Gaps = 21/347 (6%)

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D  +S F  M  +    +V  +  ++  L           L  ++E +G KP   +L+ 
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  C C    +  A ++  K+   G+ P     T L+K  C + K  EA  F   ++  G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
           F  + V Y   I GL  I     AL++ R I       DVV Y+ II GLCK + V +A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +L++EMITK + P+V T N LI G+C  G   +A   L  M+ K   +PDV T+  L+D 
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNI-NPDVYTFNILVDA 290

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL--------------------ITGLCKCD 619
           LC  G+  +A      M ++G  P+ +T+ +L                    I G CK  
Sbjct: 291 LCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIK 350

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               AL  F  M+ + + PD   + +LI           A+E++ EM
Sbjct: 351 MVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEM 397



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 152/383 (39%), Gaps = 79/383 (20%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
            +RI+P  V    ++   C +      F        GL+ E  M+   +       P+ Y
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAF--------GLLRE--MVLKNIN------PDVY 282

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           ++N L++ALCK   +   +  +  M   G   D  T + L+  YC   + +KA       
Sbjct: 283 TFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKA------- 335

Query: 128 IDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
                  +HV+SI++  F K   VDKA  L   M    I  +  T+  LI G  K  R+ 
Sbjct: 336 -------KHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 388

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
            A +L D+M  SG  +D   Y+ +I  LCKN  ++ A+ L  ++K  GI  D    + LI
Sbjct: 389 YAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILI 448

Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
                +G L        +D  V    LL               + YNL            
Sbjct: 449 DGLCKQGRL--------KDAQVIFQDLLI--------------KGYNL------------ 474

Query: 308 VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                             ++ I+IN L  +G L+ A +L  +M   GC+ +      +I 
Sbjct: 475 ---------------TVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIR 519

Query: 368 GLCNSNRLEESYELLREMEESGF 390
            L  +++ E + +LLREM   G 
Sbjct: 520 ALFENDKNERAEKLLREMIARGL 542


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 243/540 (45%), Gaps = 59/540 (10%)

Query: 134 DEHVFSILLVAF-SKWGEVDKACELIERMD---DCNIRLNEKTFCVLIHGFVKKSRVDKA 189
           D   ++I+L A   + G++ +A  L+  M        R N  ++ +++ G     R D+A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
           + L   M  SG  +D   Y  +I GLC   +L+ AL+L  EM GSG+ P+  + S L+  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 250 CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
               G         W+D                      + + +         E ++ +G
Sbjct: 195 YCRSGR--------WQD----------------------VSKVF---------EEMSRLG 215

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           VE          P+   F   I+ L K G++  A+ +   M Q G   NV  YN LI+ L
Sbjct: 216 VE----------PDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH---E 426
           C    + E+  L  EM++ G  P   T N++   L    ++ GA+ L+ +M +QG    E
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM-IQGDTLVE 324

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V     +I  LCK G+  +A      M + G + ++V Y+  IGG + + +V++A+ L
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             ++ + G  PD   Y+I+I+G  K   V  AE     M  +G+   +  Y  L+   C+
Sbjct: 385 MSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQ 444

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
            G ++QAM+  + M    +   D + Y+T++ G C +G    A  L  +M ++G AP+ +
Sbjct: 445 LGMMEQAMVLFNEM--DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAV 502

Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           T+  LI    K      A    + M   G  PD+ VF +LI  + +E       +++ EM
Sbjct: 503 TYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 224/523 (42%), Gaps = 51/523 (9%)

Query: 44  GLVEEANMLFDQVKREG--LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           G + +A  L   + RE      PN  SY  ++  LC S   D     L+ MQ  G   D 
Sbjct: 91  GDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADV 150

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIER 160
            T   L++  C++ + D AL +  E+   G   +  V+S LL  + + G      ++ E 
Sbjct: 151 VTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEE 210

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M    +  +   F   I    KK R+ KA+++ D M + G   +   Y+V+I  LCK   
Sbjct: 211 MSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGS 270

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +  AL L +EM   G+ PD    + LI   S   E+                        
Sbjct: 271 VREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEM------------------------ 306

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                    D A  LL+ MI+G+ +              V P+  +F+ +I+ L K G++
Sbjct: 307 ---------DGAMGLLEEMIQGDTL--------------VEPDVVTFNSVIHGLCKIGRM 343

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A+S+   M + GCM N+  YN LI G    +++  +  L+ E+  SG +P  FT + +
Sbjct: 344 RQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSIL 403

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
                +  +V  A   +R M  +G    + H   L+  LC+ G   +A     +M     
Sbjct: 404 INGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCG 463

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           L D V YS  + G      +  A +L +D+   G  PD V Y+I+I+   K   + EAE 
Sbjct: 464 L-DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAER 522

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +  +M   G +P VA ++ LI G+   G I++ +  +  M  K
Sbjct: 523 VLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAK 565



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 94/184 (51%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P++++Y+ L+    K   VD  EM L+ M   G   + +   PLL   C  G  ++A+ +
Sbjct: 395 PDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVL 454

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           FNE+  +  +D   +S ++    K G++  A +L++ M D  +  +  T+ +LI+ F K 
Sbjct: 455 FNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKL 514

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             +++A ++  +M  SGF  D A++D +I G     Q+   L L  EM+   +  D + +
Sbjct: 515 GDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFI 574

Query: 244 SKLI 247
             L+
Sbjct: 575 CTLV 578



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 5/258 (1%)

Query: 17  LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           L +++++    + P  + F  +I  L  +G + +A  + + +   G C+ N  +YN L+ 
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG-CMCNLVTYNYLIG 370

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
              +   V++    + E+   G   D +T + L+  +    + D+A      +   G   
Sbjct: 371 GFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRA 430

Query: 135 EHVFSI-LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           E    I LL A  + G +++A  L   MD  N  L+   +  +++G  K   +  A QL 
Sbjct: 431 ELFHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLL 489

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
             M   G A DA  Y ++I    K   LE A ++  +M  SG  PD  +   LI   S E
Sbjct: 490 QDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAE 549

Query: 254 GELTLLVKEIWEDRDVNT 271
           G++  ++  I E R  N 
Sbjct: 550 GQINKILDLIHEMRAKNV 567


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/612 (25%), Positives = 270/612 (44%), Gaps = 85/612 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL-KEMQD 94
           LI  L   G + EA   + +++ +G C P   +Y  L+ ALC+S   +L  + L  EM++
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDG-CFPTVRTYTVLVCALCES-GRELEALSLFGEMRE 318

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
            G   + YT T L+   C  G+ D+AL + NE+++ G     V F+ L+ ++ K G ++ 
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  ++  M+   +  N +T+  LI GF +   +D+A+ L +KM +S  + D   Y+ +I 
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GLC+   ++ A +L+  M   G +PD                        W         
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPD-----------------------QWT-------- 467

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N+ M  L   G + +A+ +L+++ +                  V  N  ++  +I+ 
Sbjct: 468 --FNAFMVCLCRMGRVGEAHQILESLKEKH----------------VKANEHAYTALIDG 509

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K GK++ A SLF+ M    C+ N   +N +IDGL    +++++  L+ +M +   KPT
Sbjct: 510 YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPT 569

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +   + +  D   A  ++ ++   G++P V   T  IK  C  G+  EA   + 
Sbjct: 570 LHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVI 629

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            +  EG L D   Y+  I     +  +D A  + R +   GC P  + Y+I++  L   +
Sbjct: 630 KIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEK 689

Query: 514 RVAEAED-----------------------------LFNEMITKGLIPSVATYNLLINGW 544
              E  +                             LF +M   G +P++ TY+ LING 
Sbjct: 690 HKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGL 749

Query: 545 CKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           CK G ++ A      M  +E G SP  I + +L+   C  G   +A+ L + M E     
Sbjct: 750 CKVGRLNVAFSLYHHM--REGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLA 807

Query: 604 NRITFMALITGL 615
           +  ++  LI GL
Sbjct: 808 HLESYKLLICGL 819



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 171/656 (26%), Positives = 271/656 (41%), Gaps = 99/656 (15%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEM-QDYGWGY--DKYTLTPLLQVYCNSGQFDKALSVF 124
           SYN LL  L +   VD +    KEM  D G     +  TL  +L  YC  G    A   F
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212

Query: 125 NEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             I+      D   ++ L++ + +  +V++AC +   M     R N  ++  LIHG  + 
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGLCEA 268

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            ++ +AL+ + +M + G       Y V++  LC++ +   AL L+ EM+  G  P+    
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328

Query: 244 SKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           + LI     EG +   +K + E  ++ V    +  N+++      G ++ A         
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA--------- 379

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                 VGV  LM  K  V PN  +++ +I    +   +D A++L  +M +     +V  
Sbjct: 380 ------VGVLGLMESK-KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVT 432

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN LI GLC    ++ +  L R M   GF P  +T N+   CLCR   V  A  ++  ++
Sbjct: 433 YNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLK 492

Query: 422 VQGHEPWVKHN----TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL--- 474
               E  VK N    T LI   CK GK   A      M+ E  LP+ + ++  I GL   
Sbjct: 493 ----EKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548

Query: 475 ---------------IDIKRV-----------------DLALELFRDICAHGCCPDVVAY 502
                           D+K                   D A E+   + + G  P+VV Y
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTY 608

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
              I   C   R+ EAE++  ++  +G++     YNLLIN +   G +D A   L RM  
Sbjct: 609 TAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF- 667

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDA-----------------------------IMLW 593
                P  +TY+ L+  L I     +                               +L+
Sbjct: 668 GTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLF 727

Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +M E GC PN  T+  LI GLCK  R   A   +  M+E G+ P   +  +L+S+
Sbjct: 728 EKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS 783



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 11/337 (3%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P   ++ +++  L + G+   ALSLF EM + GC  NV+ Y  LID LC   R++E+ ++
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTLLIKE 438
           L EM E G  P+    N++    C+R   +D VG L L+   +V    P V+    LI  
Sbjct: 348 LNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVC---PNVRTYNELICG 404

Query: 439 LCKHGKAME-AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            C+ GK+M+ A   L  MV+    PD+V Y+  I GL ++  VD A  LFR +   G  P
Sbjct: 405 FCR-GKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSP 463

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D   +N  +  LC+  RV EA  +   +  K +  +   Y  LI+G+CK+G I+ A    
Sbjct: 464 DQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLF 523

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            RML +E   P+ IT+  +IDGL   G+  DA++L  +M +    P   T+  L+  + K
Sbjct: 524 KRMLAEEC-LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLK 582

Query: 618 -CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             D  RA  +  R++   G +P++  + A I A+ S+
Sbjct: 583 EYDFDRANEILNRLIS-SGYQPNVVTYTAFIKAYCSQ 618



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 183/386 (47%), Gaps = 38/386 (9%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           I +    P+  ++  ++    ++  ++ A  +F  M +    +N   Y NLI GLC + +
Sbjct: 215 ILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPR----RNAVSYTNLIHGLCEAGK 270

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L E+ E    M E G  PT  T   +   LC     + AL+L  +MR +G EP V   T+
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK G+  EA + L +MV++G  P +V ++A IG       ++ A+ +   + +  
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA- 553
            CP+V  YN +I G C+ + +  A  L N+M+   L P V TYN LI+G C+ G +D A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 554 ---------------------MLCLSRM------------LEKESGSPDVITYTTLIDGL 580
                                M+CL RM            L+++    +   YT LIDG 
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C AG+ + A  L+  M  + C PN ITF  +I GL K  + + A++    M +  +KP +
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  L+   L E +   A E+L  +
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRL 596



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 231/551 (41%), Gaps = 87/551 (15%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           R + +     L   +V+S+  +SP  + +  LI  L  VG+V+ A+ LF  + R+G   P
Sbjct: 407 RGKSMDRAMALLNKMVESK--LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFS-P 463

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
           + +++N  +  LC+   V      L+ +++     +++  T L+  YC +G+ + A S+F
Sbjct: 464 DQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLF 523

Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
             ++    +   + F++++    K G+V  A  L+E M   +++    T+ +L+   +K+
Sbjct: 524 KRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKE 583

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
              D+A ++ +++  SG+  +   Y   I   C   +LE A ++  ++K  G+  D  I 
Sbjct: 584 YDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIY 643

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG- 302
           + LI +                                     G +D A+ +L+ M    
Sbjct: 644 NLLINAYG---------------------------------CMGLLDSAFGVLRRMFGTG 670

Query: 303 -EP---IADVGVEMLMIFKGTV-SPNTSSFDIIINTLLKD-----GKLDLALS--LFREM 350
            EP      + ++ L+I K      N    D+ +  +  D      K+D  ++  LF +M
Sbjct: 671 CEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKM 730

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + GC+ N+  Y+ LI+GLC   RL  ++ L   M E G  P+                 
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE---------------- 774

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
                             + HN+LL    CK G   EA   L  M++   L  +  Y   
Sbjct: 775 ------------------IIHNSLL-SSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLL 815

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL +    + A  +F  +   G   D VA+ ++I GL K   V +  +L N M   G 
Sbjct: 816 ICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGC 875

Query: 531 IPSVATYNLLI 541
                TY++L+
Sbjct: 876 RLHPETYSMLM 886



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 24/269 (8%)

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK---AMEAFRFLTD 454
           NSM +      D    LNL+R+M         +H       L  + +    +  F  + +
Sbjct: 110 NSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDE 169

Query: 455 MVQ----------EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI--CAHGCCPDVVAY 502
           M+               P+++  +  +     +  + +A   F  I  C  G  PD+  Y
Sbjct: 170 MISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPG--PDLFTY 227

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             ++ G C+   V  A  +F  M  +  +    +Y  LI+G C++G + +A+   +RM  
Sbjct: 228 TSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNLIHGLCEAGKLHEALEFWARM-- 281

Query: 563 KESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +E G  P V TYT L+  LC +GR  +A+ L+ EM E+GC PN  T+  LI  LCK  R 
Sbjct: 282 REDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRM 341

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAF 650
             AL     M EKG+ P +  F ALI ++
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSY 370



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 35/203 (17%)

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMIT---KGLIPSVATYNLLINGWCKSGNIDQAM 554
            + +YN ++  L +   V E   L+ EM+T     + P++ T N ++N +CK GN+  A 
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209

Query: 555 LCLSRMLEKESGSPDVITYTT-------------------------------LIDGLCIA 583
           L   R+L  E G PD+ TYT+                               LI GLC A
Sbjct: 210 LFFVRILRCEPG-PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEA 268

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+  +A+  W  M E GC P   T+  L+  LC+  R   AL  F  M+E+G +P+++ +
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328

Query: 644 VALISAFLSELNPPLAFEVLKEM 666
             LI     E     A ++L EM
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEM 351


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 217/458 (47%), Gaps = 26/458 (5%)

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           GL +  +L+ AL+L   + GSG  P     + LI     +G +    + + E    +   
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVAD-AERVVEALGPSATI 128

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
           +  N+++      G+ID A    + MI   P A               P+T +++ +I  
Sbjct: 129 ITYNTMVNGYCRAGNIDAA----RRMIDSVPFA---------------PDTFTYNPLIRA 169

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L   G +  AL++F +M   GC  +V  Y+ L+D  C  +  +++  LL EM   G +P 
Sbjct: 170 LCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPD 229

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T N +   +C + DV  AL ++  +   G +P     T ++K LC   +  EA + LT
Sbjct: 230 IVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLT 289

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
            M      PD V ++A I  L     V  A ++   +  HGC PD++ Y+ I+ GLCK +
Sbjct: 290 KMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKER 349

Query: 514 RVAEA----EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           RV EA    ++L  EM++K  IP   T+N +I   C+ G  D+A+  +  M E     PD
Sbjct: 350 RVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE-HGCIPD 408

Query: 570 VITYTTLIDG-LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           + TY  ++DG LC + + ++A+ L N M   G  P+  T+ +L  GL + D    A+  F
Sbjct: 409 ITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMF 468

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R ++  G+ PD  ++ A++     +    LA +    M
Sbjct: 469 RRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 191/424 (45%), Gaps = 26/424 (6%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            ++ ++  + + G +D A  +I   D      +  T+  LI     +  V  AL +FD M
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMI---DSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
              G +     Y +++   CK    + A+ L  EM+  G  PD    + LI +   +G++
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDV 246

Query: 257 --TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              L V             +    +++ L S+   ++A  LL  M               
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKM--------------- 291

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
            F    +P+  +F+ +I +L + G +  A  +  +M++ GC  ++  Y++++DGLC   R
Sbjct: 292 -FSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERR 350

Query: 375 LEESY----ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
           ++E+     ELL EM      P   T N++   LC++     A+ +V +M   G  P + 
Sbjct: 351 VDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDIT 410

Query: 431 -HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
            +N ++   LCK  K  EA   L  MV  G  PD   Y +   GL     ++ A+ +FR 
Sbjct: 411 TYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRR 470

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + A G  PD + YN I+ GLCK  R   A D F  M++ G +P  +TY +L+ G    G 
Sbjct: 471 VQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGF 530

Query: 550 IDQA 553
           +++A
Sbjct: 531 LEEA 534



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 210/445 (47%), Gaps = 25/445 (5%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI+ L + G V +A  + + +      +    +YN ++   C++ ++D     +  +  
Sbjct: 101 ILIKKLCADGRVADAERVVEALGPSATII----TYNTMVNGYCRAGNIDAARRMIDSVP- 155

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
             +  D +T  PL++  C  G    AL+VF++++  G     V +SILL A  K     +
Sbjct: 156 --FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L++ M       +  T+ VLI+    +  V +AL++ + +   G   DA  Y  ++ 
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNT 271
            LC +++ E A +L ++M  +   PD    + +ITS   +G +    K + +  +     
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +  +SIM  L     +D+A  LL+ ++             M+ K  + P+  +F+ II
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAE-----------MVSKNCI-PDQVTFNTII 381

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG-LCNSNRLEESYELLREMEESGF 390
            +L + G  D A+ +  EM++ GC+ ++  YN ++DG LC S + EE+ +LL  M  +G 
Sbjct: 382 TSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGL 441

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAF 449
            P   T  S+   L R  ++  A+ + R+++  G  P  + +N +L+  LCK  +   A 
Sbjct: 442 CPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLG-LCKKWRTDLAI 500

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGL 474
            F   MV  G +PD   Y   + G+
Sbjct: 501 DFFAYMVSNGCMPDESTYIILVEGI 525



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 30/298 (10%)

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N   R L +R ++ GAL LV  +   G +P V    +LIK+LC  G+  +A R +  +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 458 EG-----------------------------FLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                                          F PD   Y+  I  L     V  AL +F 
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           D+   GC P VV Y+I++   CK     +A  L +EM +KG  P + TYN+LIN  C  G
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           ++ +A+  L+  L      PD +TYT ++  LC + R ++A  L  +M    CAP+ +TF
Sbjct: 245 DVGEALKVLNS-LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            A+IT LC+      A      M E G  PD+  + +++     E     A ++LKE+
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 206/513 (40%), Gaps = 101/513 (19%)

Query: 115 GQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           G+ D AL + + I   G  D  V   +IL+      G V  A  ++E +      +   T
Sbjct: 75  GELDGALRLVHSISGSGK-DPAVIPCNILIKKLCADGRVADAERVVEALGPSATII---T 130

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           +  +++G+ +   +D A ++ D +    FA D   Y+ +I  LC    +  AL ++ +M 
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDML 187

Query: 233 GSGITPDFEILSKLI-TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
             G +P     S L+  +C + G                                    Q
Sbjct: 188 HRGCSPSVVTYSILLDATCKESG----------------------------------YKQ 213

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A  LL  M                 KG   P+  +++++IN +   G +  AL +   + 
Sbjct: 214 AVVLLDEMRS---------------KG-CEPDIVTYNVLINAMCSQGDVGEALKVLNSLP 257

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC  +   Y  ++  LC+S R EE+ +LL +M  +   P   T N++   LC++  V 
Sbjct: 258 SYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVG 317

Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL----TDMVQEGFLPDIVCY 467
            A  ++ +M   G  P +   + ++  LCK  +  EA + L     +MV +  +PD V +
Sbjct: 318 RATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTF 377

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG-LCKAQRVAEAEDLFNEMI 526
           +  I  L      D A+++  ++  HGC PD+  YN I+ G LCK+ +  EA DL N M+
Sbjct: 378 NTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMV 437

Query: 527 TKGLIPSVATY-----------------------------------NLLINGWCKSGNID 551
           + GL P   TY                                   N ++ G CK    D
Sbjct: 438 SNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTD 497

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
            A+   + M+      PD  TY  L++G+   G
Sbjct: 498 LAIDFFAYMVSN-GCMPDESTYIILVEGIAYEG 529



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 169/377 (44%), Gaps = 34/377 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LIR L   G V +A  +FD +   G C P+  +Y+ LL+A CK        + L EM+  
Sbjct: 166 LIRALCVRGCVLDALAVFDDMLHRG-CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK 224

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF---SKWGEV 151
           G   D  T   L+   C+ G   +AL V N +  +G   + V ++ +L +     +W E 
Sbjct: 225 GCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEA 284

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           DK   L+ +M   +   +E TF  +I    +K  V +A ++  +M++ G   D   Y  I
Sbjct: 285 DK---LLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSI 341

Query: 212 IGGLCKNKQLEMAL----QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           + GLCK ++++ A+    +L +EM      PD    + +ITS   +G     +K + E  
Sbjct: 342 MDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMS 401

Query: 268 ------DVNTMT-----LLCNS--------IMRILVSNG--SIDQAYNLLQAMIKGEPIA 306
                 D+ T        LC S        ++ ++VSNG       Y  L   +  E   
Sbjct: 402 EHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEM 461

Query: 307 DVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
           +  + M    +   +SP+   ++ I+  L K  + DLA+  F  M   GCM +   Y  L
Sbjct: 462 ERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIIL 521

Query: 366 IDGLCNSNRLEESYELL 382
           ++G+     LEE+ ELL
Sbjct: 522 VEGIAYEGFLEEAKELL 538


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 228/488 (46%), Gaps = 23/488 (4%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           +D A  LF +M  +     A  +  ++  L   K     + ++ E+    I  D   LS 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 246 LITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG- 302
           ++ SC      +L   V  I   + +    +   +++R L +   +  A +L + +++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 303 --EP----------------IADVGVEMLMIF-KGTVSPNTSSFDIIINTLLKDGKLDLA 343
             EP                      ++L +  +G   P+T  ++I+I+   KDG LD A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            SL  EM Q     ++  Y +LIDGL   ++ E+   L  EM      P   T NS+   
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LC+   V  A  ++  M  +G EP      +++   C  G+   A R    M+ +G  PD
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ Y+A I G ++ K++D A++LFR+I  +G  P +V  ++++ GL +  R   A+  F+
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM   G IP++ T+  L+ G+ K+G +++AM    + LE+     ++  YT +I+GLC  
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHK-LERRREDTNIQIYTAVINGLCKN 471

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+ D A   + ++   G  P+ IT+ A+I+G C+      A    R M++ G  PD   +
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTY 531

Query: 644 VALISAFL 651
             ++  F 
Sbjct: 532 NVIVRGFF 539



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 226/520 (43%), Gaps = 21/520 (4%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           +P+  S++ LL+AL        V    +E+       D + L+ ++   C   + D   S
Sbjct: 69  LPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFS 128

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNI-RLNEKTFCVLIHGF 180
           V       G   +E  F+ L+       +V  A  L +++   NI   +E  +  ++ G 
Sbjct: 129 VLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGL 188

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            KK    KA  L   M +     D  +Y+++I   CK+  L+ A  L +EMK   I PD 
Sbjct: 189 CKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDI 248

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQA 298
              + LI       +   +     E   +N    +C  NS++  L   G ++ A  ++  
Sbjct: 249 ITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTY 308

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           MI+               KG V PN  +++++++     G++  A  +F  M   G   +
Sbjct: 309 MIE---------------KG-VEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +  Y  LI+G     +++++ +L RE+ ++G KP+  T + + R L        A     
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M+  GH P +  +  L+    K+G   EA      + +     +I  Y+A I GL    
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNG 472

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           ++D A   F  +   G  PDV+ Y  +ISG C+   + EA+D+  +M   G +P   TYN
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYN 532

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           +++ G+ +S  + + M    + +  +S S +  T   L+D
Sbjct: 533 VIVRGFFRSSKVSE-MKAFLKEIAGKSFSFEAATVELLMD 571



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 199/473 (42%), Gaps = 81/473 (17%)

Query: 2   ASILSRARRIAPLRVLA-----QDVVKSRCFMSPGALGF--------------------L 36
           +S++S  R I  LR+         VV S C M    LGF                    L
Sbjct: 89  SSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTL 148

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY--------------------------- 69
           IR L +   V++A  LF ++ RE +C P+   Y                           
Sbjct: 149 IRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGI 208

Query: 70  --------NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
                   N +++A CK   +D     L EM+      D  T T L+       Q++K  
Sbjct: 209 TKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVR 268

Query: 122 SVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           ++F E+I  + + D   F+ ++    K G+V+ A E++  M +  +  NE T+ V++ G+
Sbjct: 269 TLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGY 328

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
             + ++ +A ++FD M   G   D   Y  +I G  + K+++ A+QL+ E+  +G+ P  
Sbjct: 329 CLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS- 387

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY---NLLQ 297
                 I +CS      +L++ ++E        +  + +     + G I   Y    LL 
Sbjct: 388 ------IVTCS------VLLRGLFEVGRTECAKIFFDEMQ----AAGHIPNLYTHCTLLG 431

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
              K   + +       + +     N   +  +IN L K+GKLD A + F ++  IG   
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHP 491

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
           +V  Y  +I G C    L+E+ ++LR+ME++G  P + T N + R   R   V
Sbjct: 492 DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKV 544



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           ++K +D A  LFR +      P  V+++ ++  L   +  +    +F E I K  IP  A
Sbjct: 49  NVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFRE-IHKLRIPVDA 107

Query: 536 -TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLW 593
              + ++N  C     D     L+   +K  G P + +T+TTLI GL    +  DA+ L+
Sbjct: 108 FALSTVVNSCCLMHRTDLGFSVLAIHFKK--GIPYNEVTFTTLIRGLFAENKVKDAVHLF 165

Query: 594 NEM-EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
            ++  E  C P+ + +  ++ GLCK    + A    R+M++   KPD  ++  +I AF  
Sbjct: 166 KKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCK 225

Query: 653 ELNPPLAFEVLKEM 666
           +     A  +L EM
Sbjct: 226 DGMLDGATSLLNEM 239



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 7/229 (3%)

Query: 44  GLVEEANM-----LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           G VE+  M     LF ++ + GL  P+  + + LL  L +    +  ++   EMQ  G  
Sbjct: 362 GYVEKKKMDKAMQLFREISQNGL-KPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHI 420

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
            + YT   LL  Y  +G  ++A+S F+++       +  +++ ++    K G++DKA   
Sbjct: 421 PNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHAT 480

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
            E++    +  +  T+  +I G+ ++  +D+A  +  KM  +G   D   Y+VI+ G  +
Sbjct: 481 FEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFR 540

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           + ++        E+ G   + +   +  L+   +++  L  ++ E   D
Sbjct: 541 SSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHRD 589


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 249/551 (45%), Gaps = 70/551 (12%)

Query: 115 GQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV----------DKACELIERMDDC 164
           G   KALS F+ ++D         S  + AF  + E+          ++A +L   M + 
Sbjct: 16  GNSGKALS-FSRLLD--------LSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVES 66

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
               +   F  L++   K  + D  + L D +   G + D    ++++   C++ Q  +A
Sbjct: 67  RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA 126

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
                +M   G  PD    + LI                                     
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLING---------------------------------FC 153

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
               +++A +++  M          VEM       + P+   +  II++L K+G ++ AL
Sbjct: 154 LGNRMEEAMSMVNQM----------VEM------GIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           SLF +M   G   +V +Y +L++GLCNS R  ++  LLR M +   KP   T N++    
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +    + A  L  +M      P +   T LI   C  G   EA +    M  +G  PD+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y++ I G    K+VD A+++F ++   G   + + Y  +I G  +  +   A+++F+ 
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE--SGSPDVITYTTLIDGLCI 582
           M+++G+ P++ TYN+L++  C +G + +A++    M ++E    +P++ TY  L+ GLC 
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ + A+M++ +M ++      IT+  +I G+CK  + + A+  F  +  KG+KP++  
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497

Query: 643 FVALISAFLSE 653
           +  +IS    E
Sbjct: 498 YTTMISGLFRE 508



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 234/547 (42%), Gaps = 87/547 (15%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E   +P+   +  LL  + K    D+V      +Q  G  +D YT   L+  +C S Q  
Sbjct: 65  ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124

Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
            A S   +++  G+  + V                                  TF  LI+
Sbjct: 125 LASSFLGKMMKLGFEPDIV----------------------------------TFTSLIN 150

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           GF   +R+++A+ + ++M + G   D  MY  II  LCKN  +  AL L+ +M+  GI P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D  + + L+    + G         W D D                         +LL+ 
Sbjct: 211 DVVMYTSLVNGLCNSGR--------WRDAD-------------------------SLLRG 237

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           M K +                + P+  +F+ +I+  +K+GK   A  L+ EM ++    N
Sbjct: 238 MTKRK----------------IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           +F Y +LI+G C    ++E+ ++   ME  G  P      S+    C+ + V  A+ +  
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +M  +G        T LI+   + GK   A    + MV  G  P+I  Y+  +  L    
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401

Query: 479 RVDLALELFRDICAH---GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           +V  AL +F D+      G  P++  YN+++ GLC   ++ +A  +F +M  + +   + 
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TY ++I G CK+G +  A+      L  +   P+V+TYTT+I GL   G   +A +L+ +
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCS-LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520

Query: 596 MEEKGCA 602
           M+E G +
Sbjct: 521 MKEDGVS 527



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 163/337 (48%), Gaps = 1/337 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           I+   L   + + AL LF  M +   + ++  +  L++ +    + +    L   ++  G
Sbjct: 43  ILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
                +T N +  C C+      A + + KM   G EP +   T LI   C   +  EA 
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
             +  MV+ G  PD+V Y+  I  L     V+ AL LF  +  +G  PDVV Y  +++GL
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222

Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
           C + R  +A+ L   M  + + P V T+N LI+ + K G    A    + M+ + S +P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPN 281

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
           + TYT+LI+G C+ G  D+A  ++  ME KGC P+ + + +LI G CKC +   A+  F 
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M +KG+  +   +  LI  F     P +A EV   M
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 182/390 (46%), Gaps = 21/390 (5%)

Query: 39  CLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           CLG+   +EEA  + +Q+   G+  P+   Y  ++++LCK+  V+       +M++YG  
Sbjct: 153 CLGN--RMEEAMSMVNQMVEMGI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR 209

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACEL 157
            D    T L+   CNSG++  A S+   +       D   F+ L+ AF K G+   A EL
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
              M   +I  N  T+  LI+GF  +  VD+A Q+F  M   G   D   Y  +I G CK
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTL 274
            K+++ A++++ EM   G+T +    + LI      G+   + +E++     R V     
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN-VAQEVFSHMVSRGVPPNIR 388

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
             N ++  L  NG + +A  + + M K E                V+PN  +++++++ L
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKRE-------------MDGVAPNIWTYNVLLHGL 435

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
             +GKL+ AL +F +M +      +  Y  +I G+C + +++ +  L   +   G KP  
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
            T  +M   L R      A  L RKM+  G
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           CF    A   LI        V++A  +F ++ ++GL   N  +Y  L++   +    ++ 
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL-TGNTITYTTLIQGFGQVGKPNVA 371

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI----IDHGWVDEHVFSIL 141
           +     M   G   +  T   LL   C +G+  KAL +F ++    +D    +   +++L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431

Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
           L      G+++KA  + E M    + +   T+ ++I G  K  +V  A+ LF  +   G 
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
             +   Y  +I GL +      A  L+ +MK  G++
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 244/550 (44%), Gaps = 22/550 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  Y   G   +A   F  +   G     HV++ L+ A++   ++++A     +M +  
Sbjct: 312 MVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEG 371

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           + ++  T+ +++ GF K    D A + F +        +A +Y  +I   C+   ++ A 
Sbjct: 372 VEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAE 431

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            L  EM+G GI    +I   ++   +  G  E  L V E  ++       +    ++ + 
Sbjct: 432 ALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLY 491

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G I +A  + +                M+    +  N  ++ ++IN  LK      A
Sbjct: 492 AKVGKISKALEVSK----------------MMESAGIKHNMKTYSMLINGFLKLKDWANA 535

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++F ++ + G   +V LYNN+I   C    ++ +  +++EM++   +PT  T   +   
Sbjct: 536 FAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHG 595

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             R  ++  AL++   MR  G  P V     LI  L +  +  +A   L +M   G  P+
Sbjct: 596 FARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPN 655

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              Y+  + G   +     A E F  +   G   DV  Y  ++   CK+ R+  A  +  
Sbjct: 656 EHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 715

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCI 582
           EM  + +  +   YN+LI+GW + G++ +A   + +M  K+ G  PD+ TYT+ I+  C 
Sbjct: 716 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQM--KQGGVKPDIHTYTSFINACCK 773

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AG    A  +  EME  G  PN  T+  LI G  +   P  AL  F+ MK  G+KPD  V
Sbjct: 774 AGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAV 833

Query: 643 FVALISAFLS 652
           +  L++A LS
Sbjct: 834 YHCLMTALLS 843



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 222/518 (42%), Gaps = 26/518 (5%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      ++     +G  + A+  F + K     + N   Y  ++ A C++C++D  E 
Sbjct: 374 MSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHM-NAIIYGNMIYAYCQTCNMDQAEA 432

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM+  G          ++  Y   G  +K L+VF  + + G+    V +  L+  ++
Sbjct: 433 LVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYA 492

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G++ KA E+ + M+   I+ N KT+ +LI+GF+K      A  +F+ + K G   D  
Sbjct: 493 KVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVV 552

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIW 264
           +Y+ II   C    ++ A+ +  EM+     P       +I   +  GE+   L V ++ 
Sbjct: 553 LYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMM 612

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                       N+++  LV    +++A  +L  M      A  GV          SPN 
Sbjct: 613 RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM------ALAGV----------SPNE 656

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  I++     G    A   F ++   G   +V+ Y  L+   C S R++ +  + +E
Sbjct: 657 HTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKE 716

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M         F  N +     RR DV  A +L+++M+  G +P +   T  I   CK G 
Sbjct: 717 MSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGD 776

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            + A + + +M   G  P++  Y+  I G       + AL  F+++   G  PD   Y+ 
Sbjct: 777 MLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHC 836

Query: 505 IISGLCKAQRVAEAE------DLFNEMITKGLIPSVAT 536
           +++ L     V EA        +  EMI  GLI  + T
Sbjct: 837 LMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGT 874



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/565 (20%), Positives = 229/565 (40%), Gaps = 65/565 (11%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G ++      G +  A   F+ ++  G+  P ++ Y  L+ A      ++      ++M+
Sbjct: 310 GLMVSYYARRGDMHRARQTFESMRARGI-EPTSHVYTSLIHAYAVGRDMEEALSCARKMK 368

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVD 152
           + G      T + ++  +   G  D A   F E  D H  ++  ++  ++ A+ +   +D
Sbjct: 369 EEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMD 428

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A  L+  M+   I      +  ++ G+      +K L +F+++ + GFA     Y  +I
Sbjct: 429 QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLI 488

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDV 269
               K  ++  AL++   M+ +GI  + +  S LI       D      + +++ +D  +
Sbjct: 489 NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKD-GL 547

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               +L N+I+R     G++D+A  +++ M K                    P + +F  
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERH----------------RPTSRTFMP 591

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           II+   + G++  AL +F  M + GC+  V  +N LI GL    ++E++ E+L EM  +G
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAG 651

Query: 390 FKPTH-----------------------------------FTLNSMFRCLCRRQDVVGAL 414
             P                                     +T  ++ +  C+   +  AL
Sbjct: 652 VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 711

Query: 415 NLVRKMRVQGHEPWVKHNT----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            + ++M  Q     +  NT    +LI    + G   EA   +  M Q G  PDI  Y++ 
Sbjct: 712 AVTKEMSAQN----IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSF 767

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I        +  A ++  ++   G  P+V  Y  +I G  +A    +A   F EM   GL
Sbjct: 768 INACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGL 827

Query: 531 IPSVATYNLLINGWCKSGNIDQAML 555
            P  A Y+ L+        + +A +
Sbjct: 828 KPDKAVYHCLMTALLSRATVTEAYV 852


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 230/514 (44%), Gaps = 28/514 (5%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDA 205
           K   +D+A      M   N   +   F +L+   VK      A+ L  +M  S G   D 
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLL 259
            + +V+I  LC  K +     +   M   G+ P     + LI     +G      EL   
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           V++     DV T  +L N + ++    G   +A   L+ M                 +  
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKM----GKTSEAVGWLRKM----------------EERN 211

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
            +PN   +  +++ L KDG +  AL L  EM+  G   N+  Y  LI GLCN  R +E+ 
Sbjct: 212 WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAG 271

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL EM + G  P   +LN +   LC+   ++ A +++  M + G  P V     LI   
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C   +  EA R    MV  G LPDIV Y++ I G   IK ++ A+ L  ++   G  PDV
Sbjct: 332 CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDV 391

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V +  +I G C+  R   A++LF  M   G +P++ T  ++++G CKS  + +A L L  
Sbjct: 392 VTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEA-LSLFH 450

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            +EK +   +++ Y+ ++DG+C AG+ + A+ L++ +  KG   N   +  +I G  K  
Sbjct: 451 AMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQG 510

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
               A      M+E G  PD   +   +   ++E
Sbjct: 511 LLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 182/380 (47%), Gaps = 18/380 (4%)

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
           SID+A N    M K  P+                P+   F +++  ++K      A+SL 
Sbjct: 55  SIDEALNFFHTMAKMNPL----------------PSVIDFTLLLGFIVKMKHYTTAISLV 98

Query: 348 REM-TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           +EM + +G   + F+ N +I+ LC+   +   + +L  M + G +P+  T   +   LC 
Sbjct: 99  KEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCV 158

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
           + DV  A+ LV  +   G+   VK   +LI  LCK GK  EA  +L  M +  + P++V 
Sbjct: 159 KGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVV 218

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           YS  + GL     V  AL L  ++   G  P++V Y  +I GLC   R  EA  L +EM+
Sbjct: 219 YSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMM 278

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G++P + + N+L++  CK G I QA   +  M+      PDV TY +LID  C+  + 
Sbjct: 279 KMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGE-VPDVFTYNSLIDRYCLQNQM 337

Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           D+A  ++  M  +GC P+ + + +LI G CK      A+     M + G  PD+  +  L
Sbjct: 338 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 397

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I  F     P  A E+   M
Sbjct: 398 IGGFCQVGRPLAAKELFLNM 417



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 240/529 (45%), Gaps = 52/529 (9%)

Query: 89  LKEMQD-YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
           +KEM    G   D + L  ++   C+        SV   ++  G     V F+IL+    
Sbjct: 98  VKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLC 157

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
             G+V +A EL++ ++    R + KT+ VLI+G  K  +  +A+    KM +  +  +  
Sbjct: 158 VKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVV 217

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y  ++ GLCK+  +  AL L  EM G GI P+    + LI                   
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG----------------- 260

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                   LCN         G   +A +LL  M+K      +GV           P+  S
Sbjct: 261 --------LCNF--------GRWKEAGSLLDEMMK------MGV----------MPDLQS 288

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +I+++ L K+GK+  A S+   M  +G + +VF YN+LID  C  N+++E+  +   M 
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
             G  P      S+    C+ +++  A++L+ +M   G  P V   T LI   C+ G+ +
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A     +M + G +P++   +  + GL   + +  AL LF  +       ++V Y+II+
Sbjct: 409 AAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIIL 468

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G+C A ++  A +LF+ +  KGL  +V  Y ++ING+ K G +D+A   LS M E+   
Sbjct: 469 DGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNM-EENGC 527

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            PD  TY   + GL        +I     M +KG + +  T   +I  L
Sbjct: 528 MPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 168/410 (40%), Gaps = 51/410 (12%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GLV EA  L  ++  +G+  PN  +Y CL++ LC           L EM   G   D  +
Sbjct: 230 GLVSEALGLCLEMSGKGI-KPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
           L  L+ V C  G+  +A SV   +I  G V D   ++ L+  +    ++D+A  + E M 
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
                 +   +  LIHG+ K   ++KA+ L D+M K GF  D   +  +IGG C+  +  
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            A +L+  M   G  P+ +                                  C  I+  
Sbjct: 409 AAKELFLNMHKYGQVPNLQT---------------------------------CAIILDG 435

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L  +  + +A +L  AM                 K  +  N   + II++ +   GKL+ 
Sbjct: 436 LCKSQLLSEALSLFHAM----------------EKSNLDLNIVIYSIILDGMCSAGKLNT 479

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL LF  +   G   NV+ Y  +I+G      L+++ +LL  MEE+G  P   T N   +
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
            L   +++  ++  +  MR +G         ++I  L  +    E   FL
Sbjct: 540 GLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 194/489 (39%), Gaps = 56/489 (11%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ +  N ++ +LC    V      L  M   G      T T L+   C  G   +A+ +
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + +   G+  D   + +L+    K G+  +A   + +M++ N   N   +  ++ G  K
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
              V +AL L  +M+  G   +   Y  +I GLC   + + A  L  EM   G+ PD + 
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
           L+ L+     EG+       I + + V    +L   +  +   N  ID+ Y L   M + 
Sbjct: 289 LNILVDVLCKEGK-------IMQAKSVIGFMILVGEVPDVFTYNSLIDR-YCLQNQMDEA 340

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
             + +     LM+ +G + P+  ++  +I+   K   ++ A+ L  EM ++G   +V  +
Sbjct: 341 TRVFE-----LMVSRGCL-PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTW 394

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR- 421
             LI G C   R   + EL   M + G  P   T   +   LC+ Q +  AL+L   M  
Sbjct: 395 TTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEK 454

Query: 422 ----------------------------------VQGHEPWVKHNTLLIKELCKHGKAME 447
                                              +G +  V   T++I    K G   +
Sbjct: 455 SNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDK 514

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLI---DIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A   L++M + G +PD   Y+  + GL+   +I R    L + RD    G   D     +
Sbjct: 515 AEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRD---KGFSVDATTTEM 571

Query: 505 IISGLCKAQ 513
           II+ L   Q
Sbjct: 572 IINYLSTNQ 580


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 170/708 (24%), Positives = 311/708 (43%), Gaps = 63/708 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKS----------------RCFMSPGALGFLIRCLGSVG 44
           M  ILS +R+   L  L  ++V S                R   +P +L F++ CL    
Sbjct: 105 MIQILSHSRQGKMLVSLFSELVSSSNASGPEILPLVDHHRRTCATPCSLSFMVDCLIKAC 164

Query: 45  L----VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYD 100
           +    V+    LF  + R G+ VP+ +++N LL+ + ++   ++V     EM+ +    D
Sbjct: 165 ITCYDVQATICLFSGICRLGV-VPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPD 223

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
            YT   + +    + + D+AL V+ E+ + G   D   +S  L+     G+ D A  +++
Sbjct: 224 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQ 283

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            ++   + +    + +++ G  K+ R+D+A +L +   + G   D   Y  +I   CK  
Sbjct: 284 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMG 343

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCN 277
            L  A+  Y  M   GI  +  I+S L+      G  +  +     ++D  ++   ++ N
Sbjct: 344 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYN 403

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
             M     NG++++A  LL  M  G                 ++P+   +  +I+     
Sbjct: 404 IAMDTYCKNGNMNEAVKLLNEMKYG----------------GLTPDKIHYTCLISGYCLK 447

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++  A  +F EM +     ++  YN L  G C S  + E ++LL  M + G +P   T 
Sbjct: 448 GEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTY 507

Query: 398 NSMFRCLCRRQDVVGA---LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
                  CR  ++  A    N+V +  +   E  V +++++   L   G    A+     
Sbjct: 508 GIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE--VMYSSMVCGYLLS-GWTDHAYMLFVR 564

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           + ++G L D    S  I  L  +  V  A  + + +  H   PDV++Y+ +IS  C+   
Sbjct: 565 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 624

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A   F++M+ +GL   V  Y +L+NG+CK+G + +A     +M       PDVI YT
Sbjct: 625 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNL-GIKPDVIAYT 683

Query: 575 TLIDGLC----------IAGRPDDAIM------LWNEMEEKGCAPNRITFMALITGLCKC 618
            L+DG            IA      ++      L + M++    P+   +  LI G CK 
Sbjct: 684 VLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKA 743

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    A   F  M +KG+ PD + + ALI+ + S+     A ++L+EM
Sbjct: 744 EYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 791



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 248/603 (41%), Gaps = 105/603 (17%)

Query: 28  MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A G+    +G    G  + A ++  ++ RE + V    +YN +++ LCK   +D  
Sbjct: 255 VKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPV-EAMAYNMVMDGLCKEMRLDEA 313

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
           E  L+     G   D Y  + L++ YC  G    A+  +  ++ HG   + H+ S LL  
Sbjct: 314 EKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQC 373

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F K G   +A     +  D  + L++  + + +  + K   +++A++L ++M   G   D
Sbjct: 374 FRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPD 433

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +I G C   +++ A Q++ EM  + I PD    + L +                
Sbjct: 434 KIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASG--------------- 478

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                      C S        G + + ++LL  M      AD G+E          PN+
Sbjct: 479 ----------FCKS--------GLVMEVFDLLDRM------ADQGLE----------PNS 504

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I I    + G L  A  LF  + + G      +Y++++ G   S   + +Y L   
Sbjct: 505 LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 564

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +   G    HF+ + +   LCR  +V GA N+ + M      P V   + LI   C++G 
Sbjct: 565 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 624

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A  +  DMVQ G   D++ Y+  + G     R+  A +LF  +   G  PDV+AY +
Sbjct: 625 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 684

Query: 505 I---------------------------------------------------ISGLCKAQ 513
           +                                                   I G CKA+
Sbjct: 685 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 744

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + EA +LF+EM+ KGL P    Y  LING+C  G I +A   L  M++K    PD +T+
Sbjct: 745 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDK-GIEPDELTF 803

Query: 574 TTL 576
           + L
Sbjct: 804 SVL 806



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 205/483 (42%), Gaps = 23/483 (4%)

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K R   A   F      GF  D + Y  +I  L  ++Q +M + L+SE+  S      EI
Sbjct: 77  KRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEI 136

Query: 243 LSKL-------ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           L  +        T CS    +  L+K      DV     L + I R+ V        +NL
Sbjct: 137 LPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSV--WTWNL 194

Query: 296 LQAMIKGEPIADVGVEMLMIFKG-------TVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           L        IA+ G E  M+           ++P+  +F I+  +L +  K+D AL ++ 
Sbjct: 195 LLKF-----IAETG-EYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWA 248

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EMT++G   +   Y++ + GLC+  + + +Y +L+E+            N +   LC+  
Sbjct: 249 EMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEM 308

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A  L+     QG  P V   + LI+  CK G  + A      MV  G   +    S
Sbjct: 309 RLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVS 368

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             +     +     A+  F      G   D V YNI +   CK   + EA  L NEM   
Sbjct: 369 YLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYG 428

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL P    Y  LI+G+C  G +  A      ML K +  PD++TY  L  G C +G   +
Sbjct: 429 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML-KANIEPDIVTYNILASGFCKSGLVME 487

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L + M ++G  PN +T+   I G C+      A V F +++EKG+     ++ +++ 
Sbjct: 488 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 547

Query: 649 AFL 651
            +L
Sbjct: 548 GYL 550


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 261/589 (44%), Gaps = 27/589 (4%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I   G  G  E+A  L  ++  EG   P+  +Y+ +++A  K     +    L EM   G
Sbjct: 40  ITACGRGGQWEQAVRLLREMPTEG-AAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKG 98

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKA 154
              D  +    +      G++  AL +  E++    V  +V  ++  + + +K G+ + A
Sbjct: 99  IAPDARSYGAAINACARGGRWKIALDLLREMLARD-VTPNVIIYNSAINSCAKAGQWEIA 157

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L++ M    +  +  ++   I    +  R ++AL+LF+ M  SG A D   Y   I  
Sbjct: 158 VSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAA 217

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
                + + A+ L  ++   G+TP+    S +IT+C+ EG+  + +  +   R++  M L
Sbjct: 218 CANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLL---REMKAMRL 274

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKG---EPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             N    I+  N +ID       A  KG   +   D+  EM  +    + P+  S+  +I
Sbjct: 275 APN----IITYNAAID-------ACAKGGRWKEAIDLLREMPTV---GLPPDVVSYSSVI 320

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K  +   A+ + REM  +G   N   YN+ ID      + +E+  LLREM  +G  
Sbjct: 321 DACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVT 380

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
                 NS      + +    AL L+R+M   G    V   +  I    K    ++A   
Sbjct: 381 QRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKEL 440

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M   G  P+ VCY++AI       + + A++L R++   G  PDV +Y+  I+   K
Sbjct: 441 LREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAK 500

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDV 570
             +  EA  +  EM   GL P +  YN  I+   K G    A+  L  M  + +G +P++
Sbjct: 501 GDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEM--RAAGLTPNI 558

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           I+Y++ ID     G+  + I L  EM   G  P+ IT+ AL+    K D
Sbjct: 559 ISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTCAKYD 607



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 245/575 (42%), Gaps = 22/575 (3%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           GW  D+ +    +      GQ+++A+ +  E+   G   D   +S ++ A +K G+   A
Sbjct: 28  GWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMA 87

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
              +  M    I  + +++   I+   +  R   AL L  +M       +  +Y+  I  
Sbjct: 88  VFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINS 147

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT- 273
             K  Q E+A+ L  EM   G+ PD    S  I++C   G     + E++ED   + +  
Sbjct: 148 CAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEAL-ELFEDMRTSGVAP 206

Query: 274 --LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +   S +    + G   +A +LL+       I  VG+          +PN  S+  +I
Sbjct: 207 DVITYGSAIAACANGGRWKEAVSLLR------KIPTVGL----------TPNVISYSSVI 250

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
               K+G+  +AL L REM  +    N+  YN  ID      R +E+ +LLREM   G  
Sbjct: 251 TACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLP 310

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + +S+     +      A++++R+M   G  P        I    K G+  EA   
Sbjct: 311 PDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGL 370

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
           L +M   G    ++ Y++AI      ++   AL L R++   G    V +Y+  I    K
Sbjct: 371 LREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGK 430

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
                +A++L  EM T GL P+   YN  I+  C  G+  +  + L R +     SPDV 
Sbjct: 431 GNLWIKAKELLREMATVGLAPNEVCYNSAIDA-CGRGDQWEEAVDLLREMPTVGLSPDVF 489

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
           +Y++ I       +  +A+ +  EM   G AP+ I + + I    K  R + A+     M
Sbjct: 490 SYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEM 549

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  G+ P++  + + I A +          +L+EM
Sbjct: 550 RAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEM 584



 Score = 42.7 bits (99), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 55/121 (45%)

Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
           +SG+  +A+  +  M +      D  +Y   I      G+ + A+ L  EM  +G AP+ 
Sbjct: 9   RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDL 68

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             + A+I    K  + + A+     M  KG+ PD   + A I+A        +A ++L+E
Sbjct: 69  SAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLRE 128

Query: 666 M 666
           M
Sbjct: 129 M 129


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 156/646 (24%), Positives = 270/646 (41%), Gaps = 45/646 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  ++N LL ALC+        + L++M + G      T   LL  YC  G++  A  +
Sbjct: 177 PNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASEL 236

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            + +   G   D   +++L+    +     K   ++ RM    +  NE T+  LI+G VK
Sbjct: 237 IDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVK 296

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           + ++  A ++F++M+      ++  Y+ +I G C N  +E AL+L   M   G+ P+   
Sbjct: 297 EGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVT 356

Query: 243 LSKLITSCSDEGELTLLVKEIWEDR--DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              L+   S   +  L+   +   R   V    +   +++  L  NG +++A  LL  M+
Sbjct: 357 YGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDML 416

Query: 301 KGEPIADVGVEMLMI---FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           K     D+    +++    K  + PN      +I    K G L  AL+ +  M Q G + 
Sbjct: 417 KVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVS 476

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           + F  + L+   C   RLEE+   +  M   G  P+  T + +        D + A ++ 
Sbjct: 477 DHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVF 536

Query: 418 RKMRVQGHEPW------------------------------------VKHNTLLIKELCK 441
            KM   GH P                                       +NT+L     +
Sbjct: 537 DKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLT-SR 595

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC-CPDVV 500
            G    A   L +MV   F+PD   Y++ I GL    ++  AL L       G   P+  
Sbjct: 596 SGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPA 655

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  ++ GL K      A  +F +M+ +G+ P    +N+L++ + + G + +    LS M
Sbjct: 656 MYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTM 715

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             + S   ++ TY  L+ G            L+NEM   G AP+R+T+ +LI G CK   
Sbjct: 716 RSR-SLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGS 774

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A+   R +  +G K D F    L+S         +AF+++K++
Sbjct: 775 LDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQL 820



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 142/606 (23%), Positives = 266/606 (43%), Gaps = 37/606 (6%)

Query: 11   IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
            + P RVL   ++ + C M     G L   L +  ++ ++  + D            ++ +
Sbjct: 439  LVPNRVLHSTLIYNYCKM-----GNLKEALNAYAVMNQSGHVSDH-----------FTSS 482

Query: 71   CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
             L+ + C+   ++  E  +  M   G      T   ++  Y NSG   KA SVF+++   
Sbjct: 483  VLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSL 542

Query: 131  GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
            G +  +  +  LL      G +++A   + R       +    +  ++    +   +  A
Sbjct: 543  GHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNA 602

Query: 190  LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDFEILSKLIT 248
            + L D+M  + F  D+  Y  +I GLC+  ++  AL L       G+ +P+  + + L+ 
Sbjct: 603  VALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVD 662

Query: 249  SCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                EG  +  L + E   +  V    +  N ++      G + +  ++L  M       
Sbjct: 663  GLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTM------- 715

Query: 307  DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                        ++  N ++++I+++   K   +     L+ EM   G   +   +++LI
Sbjct: 716  ---------RSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLI 766

Query: 367  DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             G C S  L+ + + LR++   GFK   FTLN +   LC R ++  A +LV+++ + G  
Sbjct: 767  LGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVT 826

Query: 427  PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
            P V     L     +     EA   L  +++ G+ P    ++  I G+  +  V  A+EL
Sbjct: 827  PNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMEL 886

Query: 487  FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
              ++   G     VA + II GL ++++  EA  +   M+   +IP+VAT+  L++ +CK
Sbjct: 887  QDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCK 946

Query: 547  SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
             GN+ +A L L  ++E+     DV  Y  LI GLC  G    A  L+ EME++   PN  
Sbjct: 947  EGNVAKA-LELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTS 1005

Query: 607  TFMALI 612
             ++ LI
Sbjct: 1006 IYIVLI 1011



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 246/579 (42%), Gaps = 42/579 (7%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDK 153
           G+    +T   +L       + D   S F E+I +  V  +V  F+ILL A  + G+   
Sbjct: 139 GFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIAN-RVSPNVATFNILLNALCERGKFKS 197

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A  L+ +MD+        T+  L++ + KK R   A +L D M   G A+D   Y+V+I 
Sbjct: 198 AGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLID 257

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM- 272
            LC+  +      +   M+ + + P+    + LI     EG++ +  K   E    N + 
Sbjct: 258 DLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLP 317

Query: 273 -TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            ++  N+++    SNG+I++A  L   M+                   + PN  ++  ++
Sbjct: 318 NSVTYNTLIFGHCSNGNIEEALRLCDVMV----------------SHGLRPNEVTYGALL 361

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM------ 385
           N + K  +  L  S+   M   G       Y  +IDGLC +  LEE+ +LL +M      
Sbjct: 362 NGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVS 421

Query: 386 -------------EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
                         ++G  P     +++    C+  ++  ALN    M   GH      +
Sbjct: 422 PDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTS 481

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           ++L+   C+ G+  EA  F+  M + G  P  V +   I    +      A  +F  + +
Sbjct: 482 SVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNS 541

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G  P    Y  ++ GL     + EA+   +   +         YN ++    +SGN+  
Sbjct: 542 LGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSN 601

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG-CAPNRITFMAL 611
           A+  L  M+   +  PD  TYT+LI GLC  G+   A++L     EKG  +PN   + +L
Sbjct: 602 AVALLDEMV-MNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSL 660

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           + GL K    +AAL  F  M  +G++PD   F  L+  +
Sbjct: 661 VDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRY 699



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 175/357 (49%), Gaps = 21/357 (5%)

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
           LM F+G  SP+  + ++++ +L+KD ++DL  S F+EM       NV  +N L++ LC  
Sbjct: 134 LMGFRG-FSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCER 192

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            + + +  LLR+M+E+G  PT  T N++    C++     A  L+  M  +G    V   
Sbjct: 193 GKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTY 252

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
            +LI +LC+  ++ + +  L  M +    P+ + Y+  I GL+   ++ +A ++F ++  
Sbjct: 253 NVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSL 312

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P+ V YN +I G C    + EA  L + M++ GL P+  TY  L+NG  K      
Sbjct: 313 CNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGL 372

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               L RM   +      I+YTT+IDGLC  G  ++A+ L ++M +   +P+ +TF  L+
Sbjct: 373 VSSVLERM-RMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV 431

Query: 613 TGL-------------------CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            G                    CK    + AL  + +M + G   D F    L+++F
Sbjct: 432 NGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASF 488



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 155/670 (23%), Positives = 275/670 (41%), Gaps = 47/670 (7%)

Query: 24  SRCFMSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
           S C + P ++ +     G  S G +EEA  L D +   GL  PN  +Y  LL  + K   
Sbjct: 311 SLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGL-RPNEVTYGALLNGISKHAQ 369

Query: 82  VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF----------------- 124
             LV   L+ M+  G      + T ++   C +G  ++A+ +                  
Sbjct: 370 FGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSV 429

Query: 125 --NEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             N  +  G V   V  S L+  + K G + +A      M+      +  T  VL+  F 
Sbjct: 430 LVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFC 489

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
           +  R+++A    D M++ G A  +  +D II     +     A  ++ +M   G  P   
Sbjct: 490 RCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQF 549

Query: 240 -FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            +E L K +       E  + +            +   N+++ +   +G++  A  LL  
Sbjct: 550 TYEGLLKGLLIGGHINEAKIFMHRP-SSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDE 608

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ- 357
           M+    +                P++ ++  +I  L + GK+  AL L     + G +  
Sbjct: 609 MVMNNFV----------------PDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSP 652

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N  +Y +L+DGL      + +  +  +M   G +P     N +     R+  +    +++
Sbjct: 653 NPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDIL 712

Query: 418 RKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
             MR +        +N LL     +HG A    +   +M+  GF PD + + + I G   
Sbjct: 713 STMRSRSLCFNLATYNILLHGYSKRHGMA-RCSKLYNEMIIHGFAPDRLTWHSLILGYCK 771

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
              +D+A++  R I   G   D    N+++S LC+   +  A DL  ++   G+ P+V T
Sbjct: 772 SGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDT 831

Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
           YN L NG+ ++ + D+A   L  +LE    +P    +TTLI G+C  G    A+ L +EM
Sbjct: 832 YNSLFNGFVRTCSFDEARCILHALLE-NGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 890

Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           +  G +   +   A+I GL +  +   A     +M E  + P +  F  L+  +  E N 
Sbjct: 891 KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNV 950

Query: 657 PLAFEVLKEM 666
             A E+   M
Sbjct: 951 AKALELRSVM 960



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 2/264 (0%)

Query: 404 LCRRQDVVG-ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           +C R+++VG A+   R M  +G  P V    +++  L K  +    + F  +M+     P
Sbjct: 118 VCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSP 177

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           ++  ++  +  L +  +   A  L R +   G  P  V YN +++  CK  R   A +L 
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELI 237

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + M +KG+   V TYN+LI+  C+     +  L L RM  K    P+ ITY TLI+GL  
Sbjct: 238 DAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRM-RKNMVYPNEITYNTLINGLVK 296

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+   A  ++ EM      PN +T+  LI G C       AL    +M   G++P+   
Sbjct: 297 EGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVT 356

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           + AL++         L   VL+ M
Sbjct: 357 YGALLNGISKHAQFGLVSSVLERM 380



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 196/475 (41%), Gaps = 64/475 (13%)

Query: 1    MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
            M ++ SR+  ++    L  ++V +           LI  L   G +  A +L  +   +G
Sbjct: 589  MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648

Query: 61   LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            L  PN   Y  L++ L K                                    G    A
Sbjct: 649  LLSPNPAMYTSLVDGLLK-----------------------------------EGHSKAA 673

Query: 121  LSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
            L +F ++++ G   D   F++LL  +S+ G++ K  +++  M   ++  N  T+ +L+HG
Sbjct: 674  LYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHG 733

Query: 180  FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
            + K+  + +  +L+++M   GFA D   +  +I G CK+  L++A++   ++   G   D
Sbjct: 734  YSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVD 793

Query: 240  FEILSKLITSCSDEGELTL---LVKE---IWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
               L+ L++   +  E+ +   LVK+   +    +V+T   L N  +R      S D+A 
Sbjct: 794  CFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTC----SFDEAR 849

Query: 294  NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
             +L A++                +   +P    F  +I  + + G +  A+ L  EM  +
Sbjct: 850  CILHALL----------------ENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKIL 893

Query: 354  GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
            G        + +I GL  S + +E+  +L  M E    PT  T  ++    C+  +V  A
Sbjct: 894  GVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKA 953

Query: 414  LNLVRKMRVQGHEPW-VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            L L R +  Q H    V    +LI  LC  G    AF+   +M Q    P+   Y
Sbjct: 954  LEL-RSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIY 1007



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 9/225 (4%)

Query: 34   GFLIRCLGSVGLVE------EANMLFDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLV 85
            GF + C     LV       E  M FD VK+  +    PN  +YN L     ++CS D  
Sbjct: 789  GFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEA 848

Query: 86   EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVA 144
               L  + + G+       T L++  C  G    A+ + +E+   G   + V  S ++  
Sbjct: 849  RCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRG 908

Query: 145  FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             ++  + D+A  ++  M +  I     TF  L+H + K+  V KAL+L   M +     D
Sbjct: 909  LARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLD 968

Query: 205  AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
             A Y+V+I GLC +  ++ A +LY EM+   I P+  I   LI S
Sbjct: 969  VAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDS 1013


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 232/527 (44%), Gaps = 26/527 (4%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD-EHVFSILLVAFSKWG 149
           EM+ +G      T   +L+V   +G F  A  VF+ +   G       F  L+V   + G
Sbjct: 28  EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREG 87

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           +V++   L+  M      L+  T  V++    +K R     + F +M ++G   +   Y 
Sbjct: 88  KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 147

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
             I GLCK + ++ A  +  EM G G+ P+    + LI           L K  W +R  
Sbjct: 148 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG---------LCKIGWTERAF 198

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE----PIADVGVEMLMIFKGTVSPNTS 325
                    +   L+ + S     +    MI G      +A   + ++ + +  + PNT+
Sbjct: 199 R--------LFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 250

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +I    K G  D A  L  +M Q G + N++ YN +IDG C   +++E+Y++LR  
Sbjct: 251 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 310

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G K    T   +    C++  +  AL+L  +M   G  P ++  T LI   C+  + 
Sbjct: 311 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 370

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            E+ +F    +  G LP    Y++ I G   + R  LAL +F  +  +GC  D + Y  +
Sbjct: 371 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGAL 430

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ISGLCK  R+ EA+ L+  M+ K L+P   T   L   +C+      A+  L R+ +++ 
Sbjct: 431 ISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ- 489

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               V T   ++  L   G  D A +   ++ ++  A +  T+   I
Sbjct: 490 ---QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 195/448 (43%), Gaps = 24/448 (5%)

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIM 280
           A +++  M  +G++P       L+  C  EG   E+  L+  +W     +     C  ++
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWR-YGFSLDNATCTVVV 115

Query: 281 RILVSNGSIDQAYNLLQAMIK-GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           R L   G         + M++ G P                 PN  ++   I+ L K   
Sbjct: 116 RSLCEKGRFKDVSEFFRRMLETGTP-----------------PNVVNYTAWIDGLCKRRY 158

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL-LREMEESGFKPTHFTLN 398
           +  A  +  EM   G   NV+ +  LIDGLC     E ++ L L+ ++ S +KP   T  
Sbjct: 159 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 218

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            M    CR   +  A  L+ +M  QG +P     T LI   CK G    AF  +  M QE
Sbjct: 219 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 278

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GFLP+I  Y+A I G     ++  A ++ R   + G   D + Y I+I+  CK   +  A
Sbjct: 279 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 338

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            DLF+ M+  G  P +  Y  LI+ +C+   ++++     + L      P   TYT++I 
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCL-MIGLLPTKQTYTSMIA 397

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           G C  GR   A+ ++  M + GC  + IT+ ALI+GLCK  R   A   +  M +K + P
Sbjct: 398 GYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 457

Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
                V L   +       +A  VL  +
Sbjct: 458 CEVTRVTLTFEYCRREKTSIAVSVLDRL 485



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 153/325 (47%), Gaps = 2/325 (0%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
           ++   L+ G    A  +F  MT+ G       +  L+   C   ++EE   LL  M   G
Sbjct: 44  VLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYG 103

Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
           F   + T   + R LC +          R+M   G  P V + T  I  LCK     +AF
Sbjct: 104 FSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAF 163

Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISG 508
             L +MV  G  P++  ++  I GL  I   + A  LF + I +    P+V  Y ++I G
Sbjct: 164 HVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 223

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
            C+  ++A AE L   M+ +GL P+  TY  LI G CK G+ D+A   +++M ++E   P
Sbjct: 224 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM-KQEGFLP 282

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           ++ TY  +IDG C  G+  +A  +      +G   ++IT+  LIT  CK      AL  F
Sbjct: 283 NIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF 342

Query: 629 RMMKEKGMKPDMFVFVALISAFLSE 653
             M E G  PD+  + +LIS +  +
Sbjct: 343 DRMVENGCCPDIEAYTSLISTYCQQ 367



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 138/302 (45%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             ++     + RL E+ +++ EM   G      T N + R        V A  +   M  
Sbjct: 7   RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 66

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
            G  P  +    L+   C+ GK  E    L  M + GF  D    +  +  L +  R   
Sbjct: 67  AGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 126

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             E FR +   G  P+VV Y   I GLCK + V +A  +  EM+ +GL P+V T+  LI+
Sbjct: 127 VSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 186

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           G CK G  ++A     ++++  S  P+V TYT +I G C  G+   A ML   M E+G  
Sbjct: 187 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 246

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           PN  T+  LI G CK      A      MK++G  P+++ + A+I  F  +     A++V
Sbjct: 247 PNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV 306

Query: 663 LK 664
           L+
Sbjct: 307 LR 308



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 222/557 (39%), Gaps = 68/557 (12%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  +FD + R G+  P N  +  L+   C+   V+ V+  L  M  YG+  D  T T ++
Sbjct: 57  ARKVFDGMTRAGVS-PMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 115

Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIR 167
           +  C  G+F      F  +++ G     V ++  +    K   V +A  ++E M    ++
Sbjct: 116 RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 175

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTK-SGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            N  T   LI G  K    ++A +LF K+ K S +  +   Y V+IGG C+  +L  A  
Sbjct: 176 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 235

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMRI 282
           L   M   G+ P+    + LI      G       L+ K   E    N  T   N+++  
Sbjct: 236 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY--NAVIDG 293

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
               G I +AY +L+                M     +  +  ++ I+I    K G +  
Sbjct: 294 FCKKGKIQEAYKVLR----------------MATSQGLKFDKITYTILITEHCKQGHITY 337

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           AL LF  M + GC  ++  Y +LI   C   ++EES +   +    G  PT  T  SM  
Sbjct: 338 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM-- 395

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
                                            I   CK G++  A R    MVQ G   
Sbjct: 396 ---------------------------------IAGYCKVGRSTLALRVFERMVQNGCFA 422

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D + Y A I GL    R++ A  L+  +      P  V    +    C+ ++ + A  + 
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 482

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + +  +     V T ++++      G++D A L L ++L+ E  + D  TYT  I+  C 
Sbjct: 483 DRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLD-EDYAVDHATYTGFINS-CY 537

Query: 583 AGRPDDAIMLWNEMEEK 599
               ++   L +EM EK
Sbjct: 538 ---ENNRYALASEMSEK 551



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/372 (20%), Positives = 160/372 (43%), Gaps = 25/372 (6%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L  +G  E A  LF ++ +     PN ++Y  ++   C+   +   EM L  M + 
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 243

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C  G FD+A  + N++   G++   + ++ ++  F K G++ +A
Sbjct: 244 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            +++       ++ ++ T+ +LI    K+  +  AL LFD+M ++G   D   Y  +I  
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 363

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN---T 271
            C+ +Q+E + + + +    G+ P  +  + +I      G  TL ++ ++E    N    
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALR-VFERMVQNGCFA 422

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS------ 325
            ++   +++  L     +++A  L + M+    +      + + F+      TS      
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 482

Query: 326 ----------SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                     + D+++  L   G +D A    +++       +   Y   I+    +NR 
Sbjct: 483 DRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNR- 541

Query: 376 EESYELLREMEE 387
              Y L  EM E
Sbjct: 542 ---YALASEMSE 550


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 262/585 (44%), Gaps = 25/585 (4%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
             ++ C    G    L   L  +G++E A   F ++ +  + +P   S N  L  L K+ 
Sbjct: 53  TTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRV-LPKARSCNAFLHRLSKAG 111

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
             DL     ++M   G     +T   ++   C  G    A S+F ++   G   + V ++
Sbjct: 112 EGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYN 171

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            L+  + K G +D++  L E M       +  T+  LI+ F K   + +A + F +M   
Sbjct: 172 TLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK 231

Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGEL 256
               +   Y  +I  LCK   ++MA++ + +M   G+ P+    S LI +     + GE 
Sbjct: 232 DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA 291

Query: 257 TLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
            +L  E+ ++  D+N +T    +++  L   G +++A  L +AM                
Sbjct: 292 FMLADEMLQEHVDLNIVTY--TTLLDGLCEEGMMNEAEELFRAM---------------- 333

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
            K  V+PN  ++  +I+  +K   +D A+ LF EM +     ++ L+  ++ GLC+ ++L
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
           EE   ++ EM+ESG         ++     +  +   A+NL+ +MR  G E  V     L
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LCK G   EA  +   M      P++  Y+A I GL     +  A +LF ++     
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD +AY  +I G  K     EA ++ N+M+  G+   +  Y  L+ G  + G + QA  
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
            L+ M+ K    PD    T L+      G  D+AI L NE+ EKG
Sbjct: 574 FLAEMIGK-GIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 231/537 (43%), Gaps = 64/537 (11%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF  L     + G ++ A +   RM    +    ++    +H   K    D +   F  M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
             +G A     Y+++IG +CK   +  A  L+ +MK  G+TPD    + LI      G L
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLL 183

Query: 257 TLLV------KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
              V      K +  + DV T   L NS  +       + +A+   + M   +       
Sbjct: 184 DESVCLFEEMKFMGCEPDVITYNALINSFCKF----KGMLRAFEFFREMKDKD------- 232

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                    + PN  S+  +I+ L K+G + +A+  F +MT++G + N F Y++LID  C
Sbjct: 233 ---------LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANC 283

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +  L E++ L  EM +      H  LN                              + 
Sbjct: 284 KAGNLGEAFMLADEMLQE-----HVDLN------------------------------IV 308

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
             T L+  LC+ G   EA      M + G  P++  Y+A I G I ++ +D A+ELF ++
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM 368

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
                 PD++ +  I+ GLC   ++ E + +  EM   G+  +   Y  L++ + K+GN 
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNR 428

Query: 551 DQAMLCLSRMLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
            +A+  L  M  ++ G+   V+T+  LIDGLC  G   +AI  +  M +    PN   + 
Sbjct: 429 TEAINLLEEM--RDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           ALI GLCK +    A   F  M++K M PD   + A+I   L   N   A  +  +M
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 179/366 (48%), Gaps = 5/366 (1%)

Query: 291 QAYNLLQAMIKGE---PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
            A N+L+ ++      P +DV  E+L   +    P    FD + + L++ G L+ A   F
Sbjct: 27  HANNILKELVLSSWVLPGSDV-FEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCF 85

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             MT+   +      N  +  L  +   + S +  R+M  +G  PT FT N M   +C+ 
Sbjct: 86  LRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKE 145

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
            D++ A +L  +M+  G  P +     LI    K G   E+     +M   G  PD++ Y
Sbjct: 146 GDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITY 205

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +A I      K +  A E FR++      P+V++Y+ +I  LCK   +  A   F +M  
Sbjct: 206 NALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR 265

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            GL+P+  TY+ LI+  CK+GN+ +A +    ML+ E    +++TYTTL+DGLC  G  +
Sbjct: 266 VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ-EHVDLNIVTYTTLLDGLCEEGMMN 324

Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
           +A  L+  M + G  PN   + ALI G  K      A+  F  M+EK +KPD+ ++  ++
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384

Query: 648 SAFLSE 653
               SE
Sbjct: 385 WGLCSE 390



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 217/502 (43%), Gaps = 21/502 (4%)

Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
            L   SK GE D + +    M    I     T+ ++I    K+  +  A  LF++M K G
Sbjct: 103 FLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMG 162

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDEGELTLL 259
              D   Y+ +I G  K   L+ ++ L+ EMK  G  PD    + LI S C  +G L   
Sbjct: 163 LTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAF 222

Query: 260 --VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
              +E+ +D+D+    +  ++++  L   G +  A      M +      VG+       
Sbjct: 223 EFFREM-KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR------VGL------- 268

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               PN  ++  +I+   K G L  A  L  EM Q     N+  Y  L+DGLC    + E
Sbjct: 269 ---LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNE 325

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + EL R M ++G  P      ++     + + +  A+ L  +MR +  +P +     ++ 
Sbjct: 326 AEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVW 385

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LC   K  E    +T+M + G   + V Y+  +           A+ L  ++   G   
Sbjct: 386 GLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEV 445

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VV +  +I GLCK   V EA   F  M    L P+VA Y  LI+G CK+  I  A    
Sbjct: 446 TVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
             M +K    PD I YT +IDG    G   +A+ + N+M E G   +   + +L+ GL +
Sbjct: 506 DEMQDKNM-IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQ 564

Query: 618 CDRPRAALVHFRMMKEKGMKPD 639
           C + + A      M  KG+ PD
Sbjct: 565 CGQVQQARKFLAEMIGKGIIPD 586



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 222/500 (44%), Gaps = 57/500 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G +GL++E+  LF+++K  G C P+  +YN L+ + CK   +       +EM+D 
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMG-CEPDVITYNALINSFCKFKGMLRAFEFFREMKDK 231

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
               +  + + L+   C  G    A+  F ++   G + +E  +S L+ A  K G + +A
Sbjct: 232 DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA 291

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M   ++ LN  T+  L+ G  ++  +++A +LF  M K+G   +   Y  +I G
Sbjct: 292 FMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHG 351

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNT 271
             K + ++ A++L++EM+   I PD  +   ++     E +L    +++ E+ E   +  
Sbjct: 352 HIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKES-GIGA 410

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             ++  ++M      G+  +A NLL+ M       D+G E+ ++          +F  +I
Sbjct: 411 NPVIYTTLMDAYFKAGNRTEAINLLEEM------RDLGTEVTVV----------TFCALI 454

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           + L K G +  A+  F  M       NV +Y  LIDGLC +N + ++ +L  EM++    
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P      +M                     + G+               KHG   EA   
Sbjct: 515 PDKIAYTAM---------------------IDGN--------------LKHGNFQEALNM 539

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M++ G   D+  Y++ + GL    +V  A +   ++   G  PD      ++    +
Sbjct: 540 RNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYE 599

Query: 512 AQRVAEAEDLFNEMITKGLI 531
              + EA +L NE++ KGLI
Sbjct: 600 LGNIDEAIELQNELVEKGLI 619



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 1/206 (0%)

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +P    + A    L+++  ++ A + F  +      P   + N  +  L KA     + D
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            F +M+  G+ P+V TYN++I   CK G++  A     +M +K   +PD++TY TLIDG 
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM-KKMGLTPDIVTYNTLIDGY 177

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G  D+++ L+ EM+  GC P+ IT+ ALI   CK      A   FR MK+K +KP++
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  LI A   E    +A +   +M
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDM 263


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 170/708 (24%), Positives = 311/708 (43%), Gaps = 63/708 (8%)

Query: 1   MASILSRARRIAPLRVLAQDVVKS----------------RCFMSPGALGFLIRCLGSVG 44
           M  ILS +R+   L  L  ++V S                R   +P +L F++ CL    
Sbjct: 223 MIQILSHSRQGKMLVSLFSELVSSSNASGPEILPLVDHHRRTCATPCSLSFMVDCLIKAC 282

Query: 45  L----VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYD 100
           +    V+    LF  + R G+ VP+ +++N LL+ + ++   ++V     EM+ +    D
Sbjct: 283 ITCYDVQATICLFSGICRLGV-VPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPD 341

Query: 101 KYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIE 159
            YT   + +    + + D+AL V+ E+ + G   D   +S  L+     G+ D A  +++
Sbjct: 342 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQ 401

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            ++   + +    + +++ G  K+ R+D+A +L +   + G   D   Y  +I   CK  
Sbjct: 402 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMG 461

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCN 277
            L  A+  Y  M   GI  +  I+S L+      G  +  +     ++D  ++   ++ N
Sbjct: 462 NLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYN 521

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
             M     NG++++A  LL  M  G                 ++P+   +  +I+     
Sbjct: 522 IAMDTYCKNGNMNEAVKLLNEMKYG----------------GLTPDKIHYTCLISGYCLK 565

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G++  A  +F EM +     ++  YN L  G C S  + E ++LL  M + G +P   T 
Sbjct: 566 GEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTY 625

Query: 398 NSMFRCLCRRQDVVGA---LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
                  CR  ++  A    N+V +  +   E  V +++++   L   G    A+     
Sbjct: 626 GIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE--VMYSSMVCGYLLS-GWTDHAYMLFVR 682

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           + ++G L D    S  I  L  +  V  A  + + +  H   PDV++Y+ +IS  C+   
Sbjct: 683 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 742

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
           + +A   F++M+ +GL   V  Y +L+NG+CK+G + +A     +M       PDVI YT
Sbjct: 743 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNL-GIKPDVIAYT 801

Query: 575 TLIDGLC----------IAGRPDDAIM------LWNEMEEKGCAPNRITFMALITGLCKC 618
            L+DG            IA      ++      L + M++    P+   +  LI G CK 
Sbjct: 802 VLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKA 861

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +    A   F  M +KG+ PD + + ALI+ + S+     A ++L+EM
Sbjct: 862 EYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 909



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 248/603 (41%), Gaps = 105/603 (17%)

Query: 28  MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           + P A G+    +G    G  + A ++  ++ RE + V    +YN +++ LCK   +D  
Sbjct: 373 VKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPV-EAMAYNMVMDGLCKEMRLDEA 431

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVA 144
           E  L+     G   D Y  + L++ YC  G    A+  +  ++ HG   + H+ S LL  
Sbjct: 432 EKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQC 491

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
           F K G   +A     +  D  + L++  + + +  + K   +++A++L ++M   G   D
Sbjct: 492 FRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPD 551

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              Y  +I G C   +++ A Q++ EM  + I PD    + L +                
Sbjct: 552 KIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASG--------------- 596

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                      C S        G + + ++LL  M      AD G+E          PN+
Sbjct: 597 ----------FCKS--------GLVMEVFDLLDRM------ADQGLE----------PNS 622

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++ I I    + G L  A  LF  + + G      +Y++++ G   S   + +Y L   
Sbjct: 623 LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 682

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +   G    HF+ + +   LCR  +V GA N+ + M      P V   + LI   C++G 
Sbjct: 683 VARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGD 742

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             +A  +  DMVQ G   D++ Y+  + G     R+  A +LF  +   G  PDV+AY +
Sbjct: 743 MDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTV 802

Query: 505 I---------------------------------------------------ISGLCKAQ 513
           +                                                   I G CKA+
Sbjct: 803 LLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAE 862

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
            + EA +LF+EM+ KGL P    Y  LING+C  G I +A   L  M++K    PD +T+
Sbjct: 863 YLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDK-GIEPDELTF 921

Query: 574 TTL 576
           + L
Sbjct: 922 SVL 924



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 205/483 (42%), Gaps = 23/483 (4%)

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
           K R   A   F      GF  D + Y  +I  L  ++Q +M + L+SE+  S      EI
Sbjct: 195 KRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSSSNASGPEI 254

Query: 243 LSKL-------ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           L  +        T CS    +  L+K      DV     L + I R+ V        +NL
Sbjct: 255 LPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSV--WTWNL 312

Query: 296 LQAMIKGEPIADVGVEMLMIFKG-------TVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           L        IA+ G E  M+           ++P+  +F I+  +L +  K+D AL ++ 
Sbjct: 313 LLKF-----IAETG-EYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWA 366

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           EMT++G   +   Y++ + GLC+  + + +Y +L+E+            N +   LC+  
Sbjct: 367 EMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEM 426

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A  L+     QG  P V   + LI+  CK G  + A      MV  G   +    S
Sbjct: 427 RLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVS 486

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             +     +     A+  F      G   D V YNI +   CK   + EA  L NEM   
Sbjct: 487 YLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYG 546

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL P    Y  LI+G+C  G +  A      ML K +  PD++TY  L  G C +G   +
Sbjct: 547 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEML-KANIEPDIVTYNILASGFCKSGLVME 605

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
              L + M ++G  PN +T+   I G C+      A V F +++EKG+     ++ +++ 
Sbjct: 606 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 665

Query: 649 AFL 651
            +L
Sbjct: 666 GYL 668


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 181/366 (49%), Gaps = 7/366 (1%)

Query: 291 QAYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           Q YN+L     K   I D  +    I K  + P T SF+ +IN L K   LD    L + 
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M +     +VF Y+ LI GLC   RL+ + +L  EM++ G +P   T  ++     R + 
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343

Query: 410 VVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           +  A+N   +M   G +P  V +NTLL   LCK G   +A + + +M   G  PD + Y+
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLL-NGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I G      ++ A+E+ + +   G   D VA+  +ISG C+  RV +AE    EM+  
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G+ P  ATY ++I+G+CK GN+      L  M +     P VITY  L++GLC  G+  +
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM-QINGHKPGVITYNVLMNGLCKQGQMKN 521

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A ML   M   G  P+ IT+  L+ G CK  +    L   ++  EKG+  D   + +L+S
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL---KLRNEKGLIVDYAYYTSLVS 578

Query: 649 AFLSEL 654
            +   L
Sbjct: 579 EYNKSL 584



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 216/507 (42%), Gaps = 55/507 (10%)

Query: 118 DKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
           D A SVF  I+D         VF  L++A+   G V  A +    + + N ++       
Sbjct: 134 DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGY 193

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+   +  +        + ++ + GF      Y+++I   CK   +  A  +++E++  G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + P                                  T+  N+++  L  + ++D+ + L
Sbjct: 254 LRP---------------------------------TTVSFNTLINGLCKSRNLDEGFRL 280

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + M +                  + P+  ++ ++I+ L K+G+LD+A  LF EM Q G 
Sbjct: 281 KKTMEENR----------------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N   +  LIDG   S R++ +     +M   G KP     N++   LC+  DV  A  
Sbjct: 325 RPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           LV +M++ G +P     T LI   CK G    A      M +EG + D V ++A I G  
Sbjct: 385 LVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFC 444

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              RV  A    R++   G  PD   Y ++I G CK   V     L  EM   G  P V 
Sbjct: 445 RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
           TYN+L+NG CK G +  A + L  ML     +PD ITY  L++G C  G+ +D + L N 
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNL-GVTPDDITYNILLEGHCKNGKAEDLLKLRN- 562

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPR 622
             EKG   +   + +L++   K  + R
Sbjct: 563 --EKGLIVDYAYYTSLVSEYNKSLKDR 587



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 188/397 (47%), Gaps = 28/397 (7%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMI--KGEPIADVGVEMLMIF---KGTVSPNTSSFDII 330
           C SI+R LVS    D A ++  A++   G   ++   + LMI     G VS     F ++
Sbjct: 120 CQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV 179

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            N+               ++   GC         L+D + NSN     +    E+ E GF
Sbjct: 180 RNSNF-------------QIPFHGC-------GYLLDKMINSNSPVTIWTFYSEILEYGF 219

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
            P     N +    C+   +  A  +  ++R +G  P       LI  LCK     E FR
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
               M +    PD+  YS  I GL    R+D+A +LF ++   G  P+ + +  +I G  
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQY 339

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPD 569
           +++R+  A + +++M+T G+ P +  YN L+NG CK G++++A   +  M  K  G  PD
Sbjct: 340 RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM--KMVGMKPD 397

Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
            ITYTTLIDG C  G  + A+ +   M E+G   + + F ALI+G C+  R R A    R
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 630 MMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            M E GMKPD   +  +I  +  + N  + F++LKEM
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 170/409 (41%), Gaps = 53/409 (12%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    YN L+   CK  S+   ++   E++  G      +   L+   C S   D+   +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              + ++  + D   +S+L+    K G +D A +L + M    +R N  TF  LI G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R+D A+  + +M   G   D  MY+ ++ GLCK   +  A +L  EMK  G+ PD   
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            + LI     EG+L                     S M I                  KG
Sbjct: 401 YTTLIDGYCKEGDL--------------------ESAMEIR-----------------KG 423

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                      M  +G V  N  +F  +I+   +DG++  A    REM + G   +   Y
Sbjct: 424 -----------MNEEGVVLDNV-AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +IDG C    ++  ++LL+EM+ +G KP   T N +   LC++  +  A  L+  M  
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            G  P      +L++  CK+GKA +  +      ++G + D   Y++ +
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 143/295 (48%), Gaps = 21/295 (7%)

Query: 59  EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
           E    P+ ++Y+ L+  LCK   +D+ E    EMQ  G   +  T T L+     S + D
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
            A++ +++++  G   + V ++ LL    K G+V+KA +L++ M    ++ ++ T+  LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            G+ K+  ++ A+++   M + G   D   +  +I G C++ ++  A +   EM  +G+ 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYN 294
           PD    + +I     +G + +  K + ++  +N      +  N +M  L   G +  A  
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFK-LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
           LL+AM+      ++G          V+P+  +++I++    K+GK +  L L  E
Sbjct: 525 LLEAML------NLG----------VTPDDITYNILLEGHCKNGKAEDLLKLRNE 563


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 183/381 (48%), Gaps = 36/381 (9%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   +++ +I  L+ +G+      L+ EM+  G C  +   Y+ LI   C   R + + +
Sbjct: 192 PTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQ 251

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           LL EM+E+G +PT      +     +  DV GAL+L  +MR Q   P V   T LI+ L 
Sbjct: 252 LLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLG 311

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  EA+ F  +M +EG  PD V  +  I  L    R+D A++LF+++    C P VV
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV 371

Query: 501 AYNIIISGLCKAQ-RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            YN II  L +++ R +E    F  M   G+ PS  TY++LI+G+CK+  +++AM+ L  
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431

Query: 560 MLEK----------------------------------ESGSPDVITYTTLIDGLCIAGR 585
           M EK                                    GS     Y  +I  L  AGR
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            DDAI +++EM + GCAP+   + AL++GL +      AL   R M+E G  PD+  +  
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNI 551

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           +++       P  A E+L  M
Sbjct: 552 ILNGLAKTGGPHRAMEMLSNM 572



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 244/570 (42%), Gaps = 94/570 (16%)

Query: 17  LAQDVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           + Q++V++  C ++P  L  ++R LG+  +V +A  +F Q+K    C P   +YN ++  
Sbjct: 145 MIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRK-CQPTAQAYNSMIIM 203

Query: 76  LCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG--WV 133
           L                                    + GQ+ K   ++NE+   G  + 
Sbjct: 204 LM-----------------------------------HEGQYGKVHELYNEMSTEGHCFP 228

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   +S L+ AF K G  D A +L+  M +  ++   K + +LI  F K   V  AL LF
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           ++M       D   Y  +I GL K  +++ A   + EM+  G  PD              
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD-------------- 334

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                              T++ N+++  L   G +D A  L Q M              
Sbjct: 335 -------------------TVVMNNMINFLGKAGRLDDAMKLFQEM-------------- 361

Query: 314 MIFKGTVS--PNTSSFDIIINTLLKD-GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
               GT+   P+  +++ II  L +   +     S F  M + G   + F Y+ LIDG C
Sbjct: 362 ----GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFC 417

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            +NR+E++  LL EM+E GF P      S+   L + +    A  L ++++        +
Sbjct: 418 KTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
              ++IK L K G+  +A     +M + G  PD+  Y+A + GL     +D AL   R +
Sbjct: 478 VYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM 537

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
             HGC PD+ +YNII++GL K      A ++ + M    + P V +YN ++     +G  
Sbjct: 538 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMF 597

Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           ++A   +  M        D+ITY+++++ +
Sbjct: 598 EEAAKLMEEM-NTLGFEYDLITYSSILEAI 626



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 223/478 (46%), Gaps = 29/478 (6%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA-SDAAMYD 209
           V KA  +  ++     +   + +  +I   + + +  K  +L+++M+  G    D   Y 
Sbjct: 175 VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---SCSD-EGELTLL--VKEI 263
            +I   CK  + + A QL +EMK +G+ P  +I + LIT      D  G L+L   ++  
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ 294

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
           +   DV T T     ++R L   G ID+AY+    M +                    P+
Sbjct: 295 YCRPDVFTYT----ELIRGLGKAGRIDEAYHFFYEMQRE----------------GCRPD 334

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS-NRLEESYELL 382
           T   + +IN L K G+LD A+ LF+EM  + C+ +V  YN +I  L  S +R  E     
Sbjct: 335 TVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWF 394

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M+ESG  P+ FT + +    C+   +  A+ L+ +M  +G  P       LI  L K 
Sbjct: 395 ERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKA 454

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
            +   A     ++ +         Y+  I  L    R+D A+ +F ++   GC PDV AY
Sbjct: 455 KRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAY 514

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N ++SGL +   + EA      M   G IP + +YN+++NG  K+G   +AM  LS M +
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM-K 573

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           + +  PDV++Y T++  L  AG  ++A  L  EM   G   + IT+ +++  + K D 
Sbjct: 574 QSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 212/513 (41%), Gaps = 57/513 (11%)

Query: 4   ILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           +L  A+ ++    +   +   +C  +  A   +I  L   G   + + L++++  EG C 
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCF 227

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+  +Y+ L+ A CK    D     L EM++ G        T L+ ++        ALS+
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287

Query: 124 FNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           F E + H +    VF+   L+    K G +D+A      M     R +      +I+   
Sbjct: 288 FEE-MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLG 346

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE-MKGSGITPDF 240
           K  R+D A++LF +M           Y+ II  L ++K     +  + E MK SGI+P  
Sbjct: 347 KAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSS 406

Query: 241 EILSKLITSC--SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
              S LI     ++  E  +++ E  +++          S++  L      D A  L Q 
Sbjct: 407 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           + +     + G           S +   + ++I  L K G+LD A+++F EM ++GC  +
Sbjct: 467 LKE-----NCG-----------SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 510

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V+ YN L+ GL  +  L+E+   +R M+E G             C+              
Sbjct: 511 VYAYNALMSGLARTGMLDEALSTMRRMQEHG-------------CI-------------- 543

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
                   P +    +++  L K G    A   L++M Q    PD+V Y+  +G L    
Sbjct: 544 --------PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 595

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
             + A +L  ++   G   D++ Y+ I+  + K
Sbjct: 596 MFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 30/458 (6%)

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYD--VIIGGLCKNKQLEMALQLYSEMKGSGIT 237
            V++  +D AL+L D +      S AA+     +I  LC + +   A ++   +  SG  
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV---LAASG-- 131

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           PD  + + ++      G+L    + +  D  V       N+++R L   G    A  +L+
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDA-ARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLE 190

Query: 298 AMIKGEPIADVGVEMLMIFKGTV--------------------SPNTSSFDIIINTLLKD 337
            M +   + DV V   ++ + T                     +P+  ++++++N + ++
Sbjct: 191 DMFRRGCLPDV-VTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G+++ A+   + +   GC  N   YN ++ GL  + R E++ +L+ EM   G  P   T 
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N +   LCRR  V  A+ ++ +M   G  P       L+   CK  K  +A  F+  MV 
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
            G  PDIV Y+  +  L     VD+A+EL   +   GC P +++YN +I GL KA +  E
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +L +EM +KGL P + TY+ + +G C+   I++A+    + ++     P    Y  ++
Sbjct: 430 ALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK-VQDMGIRPTAALYNAIL 488

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            GLC      +AI L+  M   GC PN  T+  L+ GL
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 196/410 (47%), Gaps = 60/410 (14%)

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPI--ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +R+LV  G +D A  L+ ++    P   A VG    +I K   S  T+           D
Sbjct: 74  LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTA-----------D 122

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
            +  LA S            +V +YN ++ G C + +L+ +  L+ +M     +P  +T 
Sbjct: 123 ARRVLAAS----------GPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTY 169

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           N++ R LC R     AL ++  M  +G  P V   T+L++  CK     +A + L +M  
Sbjct: 170 NTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD 229

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G  PDIV Y+  + G+    RV+ A+E  +++ ++GC P+ V+YNI++ GL  A+R  +
Sbjct: 230 KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE--------------- 562
           AE L  EM  KG  P+V T+N+LI+  C+ G ++ AM  L +M +               
Sbjct: 290 AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH 349

Query: 563 -------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
                                   PD+++Y TL+  LC  G  D AI L +++++KGC+P
Sbjct: 350 AFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSP 409

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             I++  +I GL K  + + AL     M  KG++PD+  +  + S    E
Sbjct: 410 VLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 194/367 (52%), Gaps = 3/367 (0%)

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           R+L ++G     YN + A   G    D    +  +    V P+  +++ +I  L   G+ 
Sbjct: 125 RVLAASGPDVMVYNAMVAGYCGAGQLDAARRL--VADMPVEPDAYTYNTLIRGLCGRGRT 182

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             AL++  +M + GC+ +V  Y  L++  C  +  +++ +LL EM + G  P   T N +
Sbjct: 183 SNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVV 242

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
              +C+   V  A+  ++ +   G EP      +++K L    +  +A + + +M  +G 
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
            P++V ++  I  L     V+ A+E+   +  +GC P+ ++YN ++   CK +++ +A +
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
               M+++G  P + +YN L+   C++G +D A+  L ++ +K   SP +I+Y T+IDGL
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK-GCSPVLISYNTVIDGL 421

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             AG+  +A+ L +EM  KG  P+ IT+  + +GLC+ DR   A+  F  +++ G++P  
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTA 481

Query: 641 FVFVALI 647
            ++ A++
Sbjct: 482 ALYNAIL 488



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 200/450 (44%), Gaps = 27/450 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           L++  C SG+   A      ++     D  V++ ++  +   G++D A  L+    D  +
Sbjct: 110 LIKKLCASGRTADA----RRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVA---DMPV 162

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
             +  T+  LI G   + R   AL + + M + G   D   Y +++   CK    + A++
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  EM   G  PD    + ++     EG            R  + M  L N     L S 
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEG------------RVEDAMEFLKN-----LPSY 265

Query: 287 GSIDQ--AYNL-LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G      +YN+ L+ +   E   D    M  +      PN  +F+++I+ L + G ++ A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           + +  +M Q GC  N   YN L+   C   ++ ++ E +  M   G  P   + N++   
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           LCR  +V  A+ L+ +++ +G  P +     +I  L K GK  EA   L +M  +G  PD
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
           I+ YS    GL    R++ A+  F  +   G  P    YN I+ GLCK +    A DLF 
Sbjct: 446 IITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFA 505

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            MI+ G +P+ +TY +L+ G    G + +A
Sbjct: 506 YMISSGCMPNESTYTILVEGLAYEGLVKEA 535



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 198/440 (45%), Gaps = 28/440 (6%)

Query: 98  GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACEL 157
           G D      ++  YC +GQ D A  +  ++      D + ++ L+      G    A  +
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEP--DAYTYNTLIRGLCGRGRTSNALAV 188

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +E M       +  T+ +L+    K+S   +A++L D+M   G A D   Y+V++ G+C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 218 NKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
             ++E A++    +   G  P+   + I+ K            L   E WED +      
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK-----------GLFTAERWEDAE------ 291

Query: 275 LCNSIMRILVSNGSIDQ--AYNLLQAMIKGEPIADVGVEML-MIFKGTVSPNTSSFDIII 331
               +M  +   G       +N+L + +    + +  +E+L  + +   +PN+ S++ ++
Sbjct: 292 ---KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           +   K  K+  A+     M   GC  ++  YN L+  LC +  ++ + ELL ++++ G  
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           P   + N++   L +      AL L+ +M  +G +P +   + +   LC+  +  EA R 
Sbjct: 409 PVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRT 468

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              +   G  P    Y+A + GL   +    A++LF  + + GC P+   Y I++ GL  
Sbjct: 469 FCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAY 528

Query: 512 AQRVAEAEDLFNEMITKGLI 531
              V EA +LF ++ ++G++
Sbjct: 529 EGLVKEARELFAQLCSRGVV 548



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 183/401 (45%), Gaps = 19/401 (4%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P+ Y+YN L+  LC           L++M   G   D  T T LL+  C    + +A+ +
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            +E+ D G   + V ++++L    + G V+ A E ++ +       N  ++ +++ G   
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             R + A +L ++M   G   +   ++++I  LC+   +E A+++  +M   G TP+   
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 243 LSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            + L+ +   + ++   ++  E+   R      +  N+++  L  NG +D A  LL  + 
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL- 402

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
                 D G   ++I          S++ +I+ L K GK   AL L  EMT  G   ++ 
Sbjct: 403 -----KDKGCSPVLI----------SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDII 447

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ +  GLC  +R+EE+     ++++ G +PT    N++   LC+R++   A++L   M
Sbjct: 448 TYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM 507

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
              G  P     T+L++ L   G   EA      +   G +
Sbjct: 508 ISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 11/338 (3%)

Query: 331 INTLLKDGKLDLALSLFREMTQIG--CMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           +  L++ G+LD AL L   +  +       V     LI  LC S R  ++  +L     +
Sbjct: 74  LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----A 128

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P     N+M    C    +  A  LV  M V   EP       LI+ LC  G+   A
Sbjct: 129 ASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPV---EPDAYTYNTLIRGLCGRGRTSNA 185

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L DM + G LPD+V Y+  +           A++L  ++   GC PD+V YN++++G
Sbjct: 186 LAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           +C+  RV +A +    + + G  P+  +YN+++ G   +   + A   +  M  K    P
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK-GCPP 304

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
           +V+T+  LI  LC  G  + A+ +  +M + GC PN +++  L+   CK  +   A+   
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +M  +G  PD+  +  L++A        +A E+L ++
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 6/250 (2%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           L +++    C  +      LI  L   GLVE A  + +Q+ + G C PN+ SYN LL A 
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG-CTPNSLSYNPLLHAF 351

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           CK   +      ++ M   G   D  +   LL   C +G+ D A+ + +++ D G     
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411

Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
           + ++ ++   +K G+  +A EL++ M    ++ +  T+  +  G  ++ R+++A++ F K
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           +   G    AA+Y+ I+ GLCK ++   A+ L++ M  SG  P+    + L+   + EG 
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEG- 530

Query: 256 LTLLVKEIWE 265
              LVKE  E
Sbjct: 531 ---LVKEARE 537



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 2/188 (1%)

Query: 21  VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
           +V   C+    +   L+  L   G V+ A  L  Q+K +G C P   SYN +++ L K+ 
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG-CSPVLISYNTVIDGLTKAG 425

Query: 81  SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFS 139
                   L EM   G   D  T + +    C   + ++A+  F ++ D G      +++
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485

Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
            +L+   K  E   A +L   M       NE T+ +L+ G   +  V +A +LF ++   
Sbjct: 486 AILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR 545

Query: 200 GFASDAAM 207
           G  +   M
Sbjct: 546 GVVNKKLM 553


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 234/505 (46%), Gaps = 30/505 (5%)

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
           + +  +I  FV+ S  + AL  + +  K G   +  + + ++  L +  Q+  A  L+ +
Sbjct: 144 QVYATVIRVFVELSMFEDALVTYVEAKKVGV--ELQVCNFLLKRLVEGNQIMYARSLFDD 201

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIW------EDRDVNTMTLLCNSIMRILV 284
           MK SG +P+    S L++  +   +L L            E    N  T    + +  L 
Sbjct: 202 MKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATY--ATYLYGLC 259

Query: 285 SNGSIDQAYNLLQAMI-KGEPIADVGVEMLM--------------IFKGT----VSPNTS 325
               +  A+N LQ +  +G P  +     ++              +F G       P+  
Sbjct: 260 HAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVH 319

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           S+ I+++ L K G +     +  EM + G   N+  Y++L+ GLC + R+E ++EL + +
Sbjct: 320 SYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRL 379

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
           ++ GFK  H   + +    C+  D+    +L   M      P   + + LI   C+H + 
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQL 439

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA      MV +G  P++V  +  + G  +   +  A      +   G  P +  Y +I
Sbjct: 440 KEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVI 499

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I GLCK  +  +   +F +MI +G +P    Y+++I+G+ K+ ++ +A     +M++ E 
Sbjct: 500 IHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD-EG 558

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             P++ TYT+LI+GLC   +  + + L+  M  +G AP+RI + +LI   CK    +AAL
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAAL 618

Query: 626 VHFRMMKEKGMKPDMFVFVALISAF 650
             FR M+ +G+  D FV+  LI  F
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGF 643



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 227/537 (42%), Gaps = 58/537 (10%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  +Y   L  LC +  V      L+ +   G+  + Y    ++  +C+ GQ  KA+ V
Sbjct: 246 PNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEV 305

Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           F+ +   G+V D H +SIL+    K G+V     ++  M    I  N  ++  L+HG  +
Sbjct: 306 FDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCR 365

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             RV+ A +LF ++   GF  D  +Y +++ G C++  LE+   L+++M      PD   
Sbjct: 366 AGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYN 425

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
            S LI +     +L    KE  E             +  ++VS+G               
Sbjct: 426 YSSLIYAYCRHRQL----KEALE-------------VFELMVSDG--------------- 453

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                            + PN  +  I+++    +G +  A     ++ Q G + ++  Y
Sbjct: 454 -----------------ICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTY 496

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +I GLC  N+  + + +  +M + G+ P     + +     +  D+  A  L  KM  
Sbjct: 497 RVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD 556

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
           +G +P +   T LI  LC   K  E       M+ EG  PD + Y++ I        +  
Sbjct: 557 EGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKA 616

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           ALE+FR++   G   D   Y  +I G  K   +  A+    EM+ KGL P+V TY  LI 
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIV 676

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           G+ K G+  +AM   + ML+    +PD           CI G  +D     +  EEK
Sbjct: 677 GYFKIGDEKKAMAMYNSMLQA-GIAPDAKLS-------CILGLGNDGHDFGDSQEEK 725



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 202/510 (39%), Gaps = 85/510 (16%)

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            +R N  T+   ++G     +V  A      + + G+  +   ++ +I G C + Q+  A
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           ++++  MK  G  PD    S L+                                   L 
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDG---------------------------------LC 329

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G +   Y +L             VEM    +  ++PN  S+  +++ L + G+++LA 
Sbjct: 330 KQGDVLTGYYML-------------VEMA---RNGITPNLVSYSSLLHGLCRAGRVELAF 373

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
            LF+ +   G   +  +Y+ ++ G C    LE  Y+L  +M    F P  +  +S+    
Sbjct: 374 ELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAY 433

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL------------ 452
           CR + +  AL +   M   G  P V   T+L+      G   EAF FL            
Sbjct: 434 CRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSL 493

Query: 453 -----------------------TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                                   DM++ G++PD V YS  I G +    +  A  L+  
Sbjct: 494 CTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYK 553

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           +   G  P++  Y  +I+GLC   ++ E   LF  MI +GL P    Y  LI  +CK  N
Sbjct: 554 MVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSN 613

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           + +A L + R +E E  S D   YT LI G       D A +   EM  KG  P  +T+ 
Sbjct: 614 M-KAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYT 672

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            LI G  K    + A+  +  M + G+ PD
Sbjct: 673 DLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 236/517 (45%), Gaps = 34/517 (6%)

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDA 205
           K   +D+A +L + M       + K F +L+   V+      A+ L   +  S G  +D 
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKE 262
              +++I  LC+ K +     +   M   G+ P    L+ LI     +G +     LV  
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172

Query: 263 IWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
           + + R   DV T  +L N     L   G    A   L+ M +                  
Sbjct: 173 MEKMRYPLDVYTYGVLING----LCKTGDTLAAVEWLRKMEERN---------------- 212

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
             PN   +  I++ L KDG +  AL+L  EM+  G   N+  Y  LI GLCN  R +E+ 
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETG 272

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            LL EM + G +    TLN +    C+   V+ A +++  M + G  P V     LI   
Sbjct: 273 SLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           C   K  EA R    MV  G LPDIV +++ I G    K ++  + L  ++   G  PDV
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDV 392

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V +  +I G C+A R   A++LF  M   G +P++ T  ++++G CK GN+    + L+ 
Sbjct: 393 VTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK-GNLLSEAVSLAE 451

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK-- 617
            +EK +   +++ Y+ L+DG+C AG+ + A  L++ +  KG   N  T+  +I GLCK  
Sbjct: 452 AMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQG 511

Query: 618 -CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
             D+    L++   M+E G  PD   +   +   L++
Sbjct: 512 SLDKAEDLLIN---MEENGCLPDNCTYNVFVQGLLTK 545



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 213/470 (45%), Gaps = 23/470 (4%)

Query: 203 SDAAMYDVIIGGLCKN---KQLEMALQLYSEMKGSGITP---DFEILSKLITSCSDEGEL 256
           S+   + + +  LCK+   K ++ AL L+  M      P   DF +L  +I         
Sbjct: 36  SNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTA 95

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
             LVK I+    +   T+  N ++  L     +   +++L  M K      +G+E     
Sbjct: 96  ISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFK------LGLE----- 144

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P   +   +IN L   G +  A+ L   M ++    +V+ Y  LI+GLC +    
Sbjct: 145 -----PTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTL 199

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + E LR+MEE  +KP     +++   LC+   V  ALNL  +M  +G  P +     LI
Sbjct: 200 AAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLI 259

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           + LC  G+  E    L +M++ G   D+   +  +       +V  A  +   +   G  
Sbjct: 260 QGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEG 319

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV  YN +I   C   ++ EA  +F+ M+++G +P +  +  LI+GWCK  NI++ M  
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHL 379

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L  M  K    PDV+T+TTLI G C AGRP  A  L+  M + G  PN  T   ++ GLC
Sbjct: 380 LEEM-AKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLC 438

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K +    A+     M++  +  ++ ++  L+    S      A+E+   +
Sbjct: 439 KGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 192/422 (45%), Gaps = 28/422 (6%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G V +A  L++ M+     L+  T+ VLI+G  K      A++   KM +  +  +  +Y
Sbjct: 161 GNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVY 220

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWE 265
             I+ GLCK+  +  AL L SEM G G+ P+    + LI    + G   E   L+ E+ +
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280

Query: 266 ---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVS 321
                D+ T+ +L ++  +     G + QA +++  MI  GE                  
Sbjct: 281 MGMRLDLQTLNILVDAFCK----EGKVMQAKSVIGFMILTGE-----------------G 319

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+  +++ +I+      K++ A+ +F  M   GC+ ++ ++ +LI G C    + +   L
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHL 379

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L EM + GF P   T  ++    C+    + A  L   M   G  P ++   +++  LCK
Sbjct: 380 LEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
                EA      M +     +IV YS  + G+    +++ A ELF  +   G   +V  
Sbjct: 440 GNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYT 499

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y I+I GLCK   + +AEDL   M   G +P   TYN+ + G      I +++  L+ M 
Sbjct: 500 YTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMR 559

Query: 562 EK 563
           +K
Sbjct: 560 DK 561



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 199/440 (45%), Gaps = 23/440 (5%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
           T   LI+G   +  V +A+ L D M K  +  D   Y V+I GLCK      A++   +M
Sbjct: 149 TLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM 208

Query: 232 KGSGITPDFEILSKLITSCSDEG----ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNG 287
           +     P+  + S ++     +G     L L  +   +    N +T  C  +++ L + G
Sbjct: 209 EERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYAC--LIQGLCNFG 266

Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +  +LL  MIK      +G+ +          +  + +I+++   K+GK+  A S+ 
Sbjct: 267 RWKETGSLLDEMIK------MGMRL----------DLQTLNILVDAFCKEGKVMQAKSVI 310

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
             M   G   +VF YN+LI   C  N++ E+  +   M   G  P      S+    C+ 
Sbjct: 311 GFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKD 370

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           +++   ++L+ +M   G  P V   T LI   C+ G+ + A     +M + G +P++   
Sbjct: 371 KNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTC 430

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           +  + GL     +  A+ L   +       ++V Y+I++ G+C A ++  A +LF+ +  
Sbjct: 431 AVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPG 490

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
           KGL  +V TY ++I G CK G++D+A   L  M E+    PD  TY   + GL       
Sbjct: 491 KGLQINVYTYTIMIKGLCKQGSLDKAEDLLINM-EENGCLPDNCTYNVFVQGLLTKKEIA 549

Query: 588 DAIMLWNEMEEKGCAPNRIT 607
            +I     M +KG + +  T
Sbjct: 550 RSIKYLTIMRDKGFSVDAAT 569



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 214/520 (41%), Gaps = 37/520 (7%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR---L 89
           LG ++R       +     +F  +  E   +  N   NCL       C + LV      L
Sbjct: 83  LGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCL-------CRLKLVAFGFSVL 135

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
             M   G      TLT L+   C  G   +A+ + + +    + +D + + +L+    K 
Sbjct: 136 GTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKT 195

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+   A E + +M++ N + N   +  ++ G  K   V +AL L  +M+  G   +   Y
Sbjct: 196 GDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTY 255

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW---- 264
             +I GLC   + +    L  EM   G+  D + L+ L+ +   EG++      I     
Sbjct: 256 ACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMIL 315

Query: 265 --EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
             E  DV T     NS++ I      +++A  +                 LM+ +G + P
Sbjct: 316 TGEGPDVFTY----NSLIHIYCLQNKMNEAMRVFH---------------LMVSRGCL-P 355

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           +   F  +I+   KD  ++  + L  EM ++G + +V  +  LI G C + R   + EL 
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M + G  P   T   +   LC+   +  A++L   M     +  +   ++L+  +C  
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSA 475

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           GK   A+   + +  +G   ++  Y+  I GL     +D A +L  ++  +GC PD   Y
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTY 535

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           N+ + GL   + +A +      M  KG     AT  + IN
Sbjct: 536 NVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITIN 575



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 49  ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
           A  LF  + + G  VPN  +   +L+ LCK   +       + M+      +    + LL
Sbjct: 411 AKELFLNMHKYGQ-VPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILL 469

Query: 109 QVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIR 167
              C++G+ + A  +F+ +   G  ++ + ++I++    K G +DKA +L+  M++    
Sbjct: 470 DGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCL 529

Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
            +  T+ V + G + K  + ++++    M   GF+ DAA  ++ I  L  N+
Sbjct: 530 PDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNE 581


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 275/628 (43%), Gaps = 34/628 (5%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S+L +  R +    L  D+      +   A   LI    S G   EA M+F +++ EG C
Sbjct: 193 SVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG-C 251

Query: 63  VPNNYSYNCLLEALCK-SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ-FDKA 120
            P   +YN +L    K       +   +  M+  G   D YT   L+   C  G  +++A
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-CRRGSLYEEA 310

Query: 121 LSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
             VF E+   G+  + V ++ LL  + K     +A E+++ M+      +  T+  LI  
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + +   +D+A++L  +M K G   D   Y  ++ G  K  + + A++++ EM+ +G  P+
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVSNGSIDQAY 293
               + LI    + G    ++K   E +      D+ T     N+++ +   NG   +  
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVT----WNTLLAVFGQNGMDSEVS 486

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            + + M +                G V P   +F+ +I+   + G  D A++++R M   
Sbjct: 487 GVFKEMKRA---------------GFV-PERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   ++  YN ++  L      E+S ++L EM++   KP   T  S+       ++V   
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
             L  ++     EP       L+    K     E  R   ++ ++GF PDI   +A +  
Sbjct: 591 SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSI 650

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
               + V    E+   I   G  P +  YN ++    + +   ++ED+  E+I KG+ P 
Sbjct: 651 YGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPD 710

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIML 592
           + ++N +I  +C++G + +A    + M  K+ G +PDVITY T I          +AI +
Sbjct: 711 IISFNTVIFAYCRNGRMKEASRIFAEM--KDFGLAPDVITYNTFIASYASDSMFIEAIDV 768

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDR 620
              M + GC PN+ T+ +LI   CK +R
Sbjct: 769 VKYMIKNGCKPNQNTYNSLIDWFCKLNR 796



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 123/601 (20%), Positives = 261/601 (43%), Gaps = 25/601 (4%)

Query: 72  LLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
           ++  L K          L ++++ G   D Y  T L+  Y ++G++ +A+ VF ++ + G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 132 WVDEHV-FSILLVAFSKWG-EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
                + ++++L  + K G    K   L++ M    +  +  T+  LI    + S  ++A
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
            ++F++M  +GF+ D   Y+ ++    K+++   A+++  EM+ SG  P     + LI++
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 250 CSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIA 306
            + +G L   + +K     + +        +++      G  D A  + + M + G    
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG---- 426

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                          PN  +F+ +I      G     + +F E+    C+ ++  +N L+
Sbjct: 427 -------------CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLL 473

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
                +    E   + +EM+ +GF P   T N++     R      A+ + R+M   G  
Sbjct: 474 AVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVT 533

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +     ++  L + G   ++ + L +M      P+ + Y + +    + K V+    L
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
             +I +    P  V    ++    K+  + E E  F E+  +G  P + T N +++ + +
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653

Query: 547 SGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
              + +    L+ +  K+SG +P + TY +L+         + +  +  E+  KG  P+ 
Sbjct: 654 RRMVSKTNEILNFI--KDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDI 711

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           I+F  +I   C+  R + A   F  MK+ G+ PD+  +   I+++ S+     A +V+K 
Sbjct: 712 ISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKY 771

Query: 666 M 666
           M
Sbjct: 772 M 772



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/514 (21%), Positives = 217/514 (42%), Gaps = 25/514 (4%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
            L EEA  +F+++K  G   P+  +YN LL+   KS         LKEM+  G+     T
Sbjct: 305 SLYEEAAEVFEEMKAAGFS-PDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVT 363

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
              L+  Y   G  D+A+ + ++++  G   D   ++ LL  F K G+ D A ++ E M 
Sbjct: 364 YNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
               + N  TF  LI     +    + +++F+++       D   ++ ++    +N    
Sbjct: 424 VAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDS 483

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
               ++ EMK +G  P+ +  + LI++ S  G  +  + +     D  V       N+++
Sbjct: 484 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVL 543

Query: 281 RILVSNGSIDQAY-------------------NLLQAMIKGEPIADVGVEMLMIFKGTVS 321
             L   G  +Q+                    +LL A   G+ +  +      I+ G + 
Sbjct: 544 AALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIE 603

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P       ++    K   L      F E+ + G   ++   N ++        + ++ E+
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEI 663

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
           L  +++SGF P+  T NS+     R +    + +++R++  +G +P +     +I   C+
Sbjct: 664 LNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCR 723

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +G+  EA R   +M   G  PD++ Y+  I           A+++ + +  +GC P+   
Sbjct: 724 NGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNT 783

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
           YN +I   CK  R  EA    + +  + L PSV 
Sbjct: 784 YNSLIDWFCKLNRRDEASSFISNL--RNLDPSVT 815



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 222/550 (40%), Gaps = 116/550 (21%)

Query: 190 LQLFDKMTKS-GFASDAAMYDV--IIGGLCKNKQLEMALQLYSEMKGSGITPDF------ 240
           LQLF+  +    F SD+  +D+  II GL   K+ E+AL ++  ++      DF      
Sbjct: 129 LQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNR---EDFASILSN 185

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            +++ +I+    EG  +     + + R+  V+       S++    SNG   +A      
Sbjct: 186 SVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREA------ 239

Query: 299 MIKGEPIADVGVEMLMIFKGTVS----PNTSSFDIIINTLLKDGKLDLALS----LFREM 350
                         +M+FK        P   ++++I+N     GK+ +  S    L   M
Sbjct: 240 --------------VMVFKKLEEEGCRPTLITYNVILNVY---GKMGMPWSKIAGLVDSM 282

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
              G   +++ YN LI      +  EE+ E+  EM+ +GF P   T N++     + +  
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRP 342

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A+ ++++M   G  P +     LI    + G   EA    + MV++G  PD+  Y+  
Sbjct: 343 REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402

Query: 471 IGGLIDIKRVDLALELFRD---------ICA-------HG-------------------C 495
           + G     + D A+++F +         IC        HG                   C
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICEC 462

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD+V +N +++   +    +E   +F EM   G +P   T+N LI+ + + G  DQAM 
Sbjct: 463 VPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMA 522

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              RML+    +PD+ TY  ++  L   G  + +  +  EM++  C PN +T+ +L+   
Sbjct: 523 IYRRMLDA-GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 616 CKCD-----------------RPRAALVH------------------FRMMKEKGMKPDM 640
                                 P+A L+                   F  ++E+G  PD+
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDI 641

Query: 641 FVFVALISAF 650
               A++S +
Sbjct: 642 TTLNAMVSIY 651


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 251/626 (40%), Gaps = 111/626 (17%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P    YN L+ A  +   +DLVE   K++   G   D +T   LLQ  C++G+       
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRM------ 161

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
                                           EL +R+ D     NE +F +L  G+ + 
Sbjct: 162 --------------------------------ELAQRVFDAMPARNEFSFGILARGYCRA 189

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
            R   AL++ D M     + +  + + ++ G CK   +E A +L   M+  G+ P+    
Sbjct: 190 GRSIDALKVLDGMP----SMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTF 245

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
           +  I++                         LC +        G +  AY + Q M +  
Sbjct: 246 NARISA-------------------------LCKA--------GRVLDAYRIFQDMQEDW 272

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                         G   P+  +FD++++     G +D A  L   M   G ++ V  YN
Sbjct: 273 Q------------HGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYN 320

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
             + GL  + R+ E+ ELLREM   G +P  +T N +   LC+      A  +   +R  
Sbjct: 321 RWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG 380

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
              P V   T L+   C  G    A R L +M Q+G  P+   Y+  +  L    R   A
Sbjct: 381 VMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEA 440

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------------------ 525
             L   +   G   D    NIII GLC+  R+  A D+ + M                  
Sbjct: 441 ERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSV 500

Query: 526 -----ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
                I++  +P   TY++LI+  CK G  D+A   L  M+ K+  SPD + Y T I G 
Sbjct: 501 VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDI-SPDSVIYDTFIHGY 559

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
           C  G+   AI +  +ME+KGC P+  T+  LI G  +  +    +     MKEKG+ P++
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNV 619

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             + +LI +F  +     A  +L EM
Sbjct: 620 MTYNSLIKSFCQQGMVNKAMPLLDEM 645



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 251/571 (43%), Gaps = 21/571 (3%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY---- 99
           GLVEEA  L ++++ +GL  PN  ++N  + ALCK+  V       ++MQ+  W +    
Sbjct: 221 GLVEEAERLVERMRVQGL-APNVVTFNARISALCKAGRVLDAYRIFQDMQE-DWQHGLPR 278

Query: 100 -DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACE 156
            D+ T   +L  +C++G  D+A  V  +I+  G     V  ++  L    + G V +A E
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEA-RVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQE 337

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
           L+  M    I+ N  T+ +++ G  K+ +   A ++ + +     + D   Y  ++   C
Sbjct: 338 LLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYC 397

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTL 274
               +  A ++  EM   G  P+    + L+ S    G  T   +  E   ++  +  T 
Sbjct: 398 SKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTA 457

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIK--GEPIADVGVEML-MIFKGTVS----PNTSSF 327
            CN I+  L  N  +D A +++  M +     +  +G   L ++   ++S    P+  ++
Sbjct: 458 GCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITY 517

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+I+ L K+G+ D A     EM       +  +Y+  I G C   +   + ++LR+ME+
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            G  P+  T N + R    +      + L+ +M+ +G  P V     LIK  C+ G   +
Sbjct: 578 KGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNK 637

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A   L +M+Q   +P+I  +   I     I     A  +F D     C    V Y ++ +
Sbjct: 638 AMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVF-DAALRTCGQKEVLYCLMCT 696

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
            L    +  EA+++    +   +      Y  +I+G C+ G +D A   L  ++ K    
Sbjct: 697 ELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLF 756

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            D   +  +ID L   G+  D  ML  +M E
Sbjct: 757 -DPAAFMPVIDALGDRGKKQDVDMLSAKMME 786



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 233/536 (43%), Gaps = 59/536 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G V+EA +L D + R G  +    SYN  L  L ++  V   +  L+EM   G   + Y
Sbjct: 294 AGFVDEARVLVD-IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSY 352

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIER 160
           T   ++   C  G+   A  V N  I  G +   V  ++ LL A+   G +  A  +++ 
Sbjct: 353 TYNIIVSGLCKEGKAFDARRVEN-FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDE 411

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M       N  T+ VL+    +  R  +A +L ++M + G++ D A  ++II GLC+N +
Sbjct: 412 MAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSR 471

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           L++A+ +                                V  +WE+     +  L NS +
Sbjct: 472 LDVAMDI--------------------------------VDGMWEE-GSGALGRLGNSFL 498

Query: 281 RILVSNGSIDQ-------AYNLL-QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
            + VS+ SI Q        Y++L  A+ K     +   ++L +    +SP++  +D  I+
Sbjct: 499 SV-VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIH 557

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
              K GK  LA+ + R+M + GC  +   YN LI G    ++ EE  +L+ EM+E G  P
Sbjct: 558 GYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISP 617

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAF 449
              T NS+ +  C++  V  A+ L+ +M      P +    LLIK  CK      A   F
Sbjct: 618 NVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVF 677

Query: 450 -RFLTDMVQEGFLPDIVCYS-AAIGGLIDIKRV-DLALELFRDICAHGCCPDVVAYNIII 506
              L    Q+  L  ++C      G  I+ K + ++ALE+   I +         Y  II
Sbjct: 678 DAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQS-------FPYKQII 730

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           SGLC+   V  A  L   +I K  +   A +  +I+     G      +  ++M+E
Sbjct: 731 SGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMME 786



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A+ AFR L  +      P    Y+  I   +   R+DL   L++D+   G  PDV   N+
Sbjct: 92  AIPAFRSLRALTS-APPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNL 150

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           ++  LC A R+  A+ +F+ M  +       ++ +L  G+C++G    A+  L  M    
Sbjct: 151 LLQALCDAGRMELAQRVFDAMPARNEF----SFGILARGYCRAGRSIDALKVLDGM---- 202

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
             S +++   T++ G C  G  ++A  L   M  +G APN +TF A I+ LCK  R   A
Sbjct: 203 -PSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDA 261

Query: 625 LVHFRMMKE---KGM-KPDMFVFVALISAF 650
              F+ M+E    G+ +PD   F  ++S F
Sbjct: 262 YRIFQDMQEDWQHGLPRPDQVTFDVMLSGF 291


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 223/497 (44%), Gaps = 53/497 (10%)

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSG--FASDAAMYDVIIGGLCKNKQLEMALQLYS 229
           T+  L+  F+K+ R D+A  L  +M   G  F+ +   ++V+I  L +   LE A++L  
Sbjct: 239 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVD 298

Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
            M+          LSK  +S                           N ++  L+  G +
Sbjct: 299 SMR----------LSKKASS------------------------FTYNPLITALLERGFV 324

Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
            +A  L               +M M  +G + P   +++ II+ LLK  + + A   F E
Sbjct: 325 RKAEAL---------------QMEMENEG-IMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
           M  +G + +V  YN+L++  C +  L+E+  LL ++  +G  PT  T N++    CR  D
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           +  A  L  +M  QG  P V   T+L+    K      A  F  +M+ +G  PD   Y+ 
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I   + +    +A +L   +   G  PD V YN+II GLCK   + +A+ L  +M++ G
Sbjct: 489 RICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG 548

Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA 589
           L P   TY  LI+  C+ G + +A   L+ M+  +   P V+TYT L+   C  G    A
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKLLNGMV-SDGLQPSVVTYTILVHTCCRRGNLYSA 607

Query: 590 IMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
              + +M + G  PN IT+  LI  LC   R   A  HF  M E+G+ P+ + +  LI  
Sbjct: 608 YGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDG 667

Query: 650 FLSELNPPLAFEVLKEM 666
              E N   A  +  EM
Sbjct: 668 NCREGNWADAIRLYFEM 684



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 203/489 (41%), Gaps = 28/489 (5%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFDKAL 121
           P   +YN LL++  K    D   M LKEM+  G G+  +  T   ++      G  + A+
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
            + + +          ++ L+ A  + G V KA  L   M++  I     T+  +IHG +
Sbjct: 295 KLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLL 354

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  + + A   F +M   G   D   Y+ ++   CK   L+ AL L  +++ +G+ P   
Sbjct: 355 KCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVL 414

Query: 242 ILSKLITS---CSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
             + LI       D  E   L +E+ E     DV T T+L N   ++     ++  A   
Sbjct: 415 TYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR----NLAMAREF 470

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
              M+                KG + P+  +++  I   L      +A  L   M   G 
Sbjct: 471 FDEMLS---------------KG-LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGI 514

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +   YN +IDGLC +  L+++  L  +M   G +P   T   +    C R  +  A  
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L+  M   G +P V   T+L+   C+ G    A+ +   M+  G  P+ + Y+  I  L 
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              R  LA   F ++   G  P+   Y ++I G C+    A+A  L+ EM   G+ P   
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 694

Query: 536 TYNLLINGW 544
           T+N L  G+
Sbjct: 695 THNALFKGF 703



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 165/367 (44%), Gaps = 39/367 (10%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           V+P+    + ++  L    + D   +++ EM Q+     +  YN L+D      R +E+ 
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 380 ELLREMEES--GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            LL+EME    GF     T N +   L R   +  A+ LV  MR+        +N  LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNP-LIT 316

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            L + G   +A     +M  EG +P +V Y+A I GL+  ++ + A   F ++ A G  P
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           DV+ YN +++  CKA  + EA  L  ++   GL P+V TYN LI+G+C+ G++ +A    
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 558 SRMLEKESGSPDVITYTTLIDG-----------------LCIAGRPD------------- 587
             M+E +   PDV TYT L++G                 L    +PD             
Sbjct: 437 EEMVE-QGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495

Query: 588 -----DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
                 A  L   M  KG  P+ +T+  +I GLCK    + A      M   G++PD   
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555

Query: 643 FVALISA 649
           +  LI A
Sbjct: 556 YTCLIHA 562



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 160/327 (48%), Gaps = 4/327 (1%)

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
           L L+ FR +T  G   +V   N ++  L ++ R ++   +  EM +   +PT  T N++ 
Sbjct: 185 LCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLL 244

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT--LLIKELCKHGKAMEAFRFLTDMVQEG 459
               +      A  L+++M  QG    +   T  ++I  L + G    A + L D ++  
Sbjct: 245 DSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVK-LVDSMRLS 303

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
                  Y+  I  L++   V  A  L  ++   G  P VV YN II GL K ++   A+
Sbjct: 304 KKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQ 363

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
             F EM   GL+P V TYN L+N +CK+GN+ +A+  L   L +   +P V+TY TLIDG
Sbjct: 364 VKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGD-LRRAGLAPTVLTYNTLIDG 422

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
            C  G   +A  L  EM E+GC P+  T+  L+ G  K      A   F  M  KG++PD
Sbjct: 423 YCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPD 482

Query: 640 MFVFVALISAFLSELNPPLAFEVLKEM 666
            F +   I A L+  + P+AF++ + M
Sbjct: 483 CFAYNTRICAELTLSSTPMAFQLREVM 509



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 178/409 (43%), Gaps = 63/409 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G V +A  L  +++ EG+ +P   +YN ++  L K    +  +++  EM+  
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGI-MPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAM 372

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G   D  T   LL  YC +G   +AL +  ++   G     + ++ L+  + + G++ +A
Sbjct: 373 GLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEA 432

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-----FA------- 202
             L E M +     +  T+ +L++G  K   +  A + FD+M   G     FA       
Sbjct: 433 RRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICA 492

Query: 203 -----------------------SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
                                   D   Y+VII GLCK   L+ A +L ++M   G+ PD
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552

Query: 240 FEILSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAY 293
               + LI +  + G   E   L+  +  D     V T T+L ++  R     G++  AY
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCR----RGNLYSAY 608

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
              + M+      DVG+E          PN  +++++I+ L   G+  LA   F EM + 
Sbjct: 609 GWFRKML------DVGIE----------PNEITYNVLIHALCMTGRTPLAFRHFHEMLER 652

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           G   N + Y  LIDG C      ++  L  EM ++G  P + T N++F+
Sbjct: 653 GLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFK 701


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 247/554 (44%), Gaps = 30/554 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVD--EHVFSILLVAFSKWGEVDKACELIERMDDC 164
           ++  Y   G   +A   F  +   G +D   HV++ L+ A++   ++++A   + +M++ 
Sbjct: 300 MVGYYARRGDMHRARQTFESMRARG-IDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEE 358

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            I ++  T+ +++ GF K    + A   F K  +     +A +Y  II   C+   ++ A
Sbjct: 359 GIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRA 418

Query: 225 LQLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEIWE---DRDVNTMTLLCNS 278
             L  EM+  GI    +I   ++   T   +E +  ++ K + E      V T   L N 
Sbjct: 419 EALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINM 478

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
             +I    G + +A  + + M        VG++           N  ++ ++IN  LK  
Sbjct: 479 YTKI----GKVSKALEVSKMM------KSVGIKH----------NMKTYSMLINGFLKLK 518

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
               A ++F ++ + G   +V LYNN+I   C    ++ +  +++EM++   +PT  T  
Sbjct: 519 DWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFM 578

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
            +     R  ++  AL +   MR  G  P V     L+  L +  K  +A   L +M   
Sbjct: 579 PIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALA 638

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  PD   Y+  + G   +     A E F  +   G   DV  Y  ++   CK+ R+  A
Sbjct: 639 GVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSA 698

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             +  EM  + +  +   YN+LI+GW + G+I +A   + +M  +E   PD+ TYT+ I+
Sbjct: 699 LAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQM-NQEGVQPDIHTYTSFIN 757

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
             C AG    A     EME  G  PN  T+  LI G      P  AL  F  +K  G+KP
Sbjct: 758 ACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKP 817

Query: 639 DMFVFVALISAFLS 652
           D  V+  L+++ LS
Sbjct: 818 DKAVYHCLMTSLLS 831



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 212/494 (42%), Gaps = 20/494 (4%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      ++      G  E A+  F + K     + N Y Y  ++ A C++C++D  E 
Sbjct: 362 MSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNL-NAYIYGNIIYAYCQACNMDRAEA 420

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y      +K L VF  + + G+    + +  L+  ++
Sbjct: 421 LVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYT 480

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+V KA E+ + M    I+ N KT+ +LI+GF+K      A  +F+ + K G   D  
Sbjct: 481 KIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVV 540

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIW 264
           +Y+ II   C    ++ A+ +  EM+     P       +I   +  GE+   L + ++ 
Sbjct: 541 LYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMM 600

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                       N+++  LV    +++A  +L  M      A  GV          SP+ 
Sbjct: 601 RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEM------ALAGV----------SPDE 644

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            ++  I++     G    A   F +M   G   +VF Y  L+   C S R++ +  + RE
Sbjct: 645 HTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTRE 704

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M         F  N +     RR D+  A +L+++M  +G +P +   T  I   CK G 
Sbjct: 705 MNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGD 764

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            + A + + +M   G  P++  Y+  I G  +    + AL  F ++   G  PD   Y+ 
Sbjct: 765 MLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHC 824

Query: 505 IISGLCKAQRVAEA 518
           +++ L     VAEA
Sbjct: 825 LMTSLLSRATVAEA 838



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/566 (20%), Positives = 231/566 (40%), Gaps = 65/566 (11%)

Query: 33  LGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM 92
            G ++      G +  A   F+ ++  G+  P+++ Y  L+ A      ++     +++M
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGID-PSSHVYTSLIHAYAVGRDMEEALSCVRKM 355

Query: 93  QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEV 151
            + G      T + ++  +   G  + A   F +  + H  ++ +++  ++ A+ +   +
Sbjct: 356 NEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNM 415

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
           D+A  L+  M++  I      +  ++ G+      +K L +F ++ + GFA     Y  +
Sbjct: 416 DRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCL 475

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRD 268
           I    K  ++  AL++   MK  GI  + +  S LI       D      + +++ +D  
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKD-G 534

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
           +    +L N+I++     G++D+A ++++ M K                    P + +F 
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKER----------------CRPTSRTFM 578

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            II+   + G++  AL +F  M + GC+  V  +N L+ GL    ++E++ E+L EM  +
Sbjct: 579 PIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALA 638

Query: 389 GFKPTH-----------------------------------FTLNSMFRCLCRRQDVVGA 413
           G  P                                     FT  ++ +  C+   +  A
Sbjct: 639 GVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSA 698

Query: 414 LNLVRKMRVQGHEPWVKHNT----LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           L + R+M  Q     +  NT    +LI    + G   EA   +  M QEG  PDI  Y++
Sbjct: 699 LAVTREMNAQK----IPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTS 754

Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
            I        +  A +   ++ A G  P+V  Y  +I G   A    +A   F E+   G
Sbjct: 755 FINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAG 814

Query: 530 LIPSVATYNLLINGWCKSGNIDQAML 555
           L P  A Y+ L+        + +A +
Sbjct: 815 LKPDKAVYHCLMTSLLSRATVAEAYI 840



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 15/358 (4%)

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           F+    P+   F +++    + G +  A   F  M   G   +  +Y +LI        +
Sbjct: 286 FERIKKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDM 345

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL- 434
           EE+   +R+M E G + +  T + +     +  +   A    +K +        +H  L 
Sbjct: 346 EEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAK-------ERHTNLN 398

Query: 435 ------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                 +I   C+      A   + +M +EG    +  Y   + G   I+  +  L +F+
Sbjct: 399 AYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFK 458

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G  P V+ Y  +I+   K  +V++A ++   M + G+  ++ TY++LING+ K  
Sbjct: 459 RLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLK 518

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
           +   A      ++ K+   PDV+ Y  +I   C  G  D AI +  EM+++ C P   TF
Sbjct: 519 DWTNAFAVFEDVI-KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTF 577

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           M +I G  +    R AL  F MM+  G  P +  F AL+   + +     A E+L EM
Sbjct: 578 MPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEM 635



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 10/303 (3%)

Query: 17  LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
           + +++ K RC  +      +I      G +  A  +FD ++R G C+P  +++N L+  L
Sbjct: 561 MVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSG-CIPTVHTFNALVLGL 619

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDE 135
            +   ++     L EM   G   D++T T ++  Y   G   KA   F ++ + G  +D 
Sbjct: 620 VEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDV 679

Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
             +  LL A  K G +  A  +   M+   I  N   + +LI G+ ++  + +A  L  +
Sbjct: 680 FTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQ 739

Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
           M + G   D   Y   I   CK   +  A +   EM+ +G+ P+ +  + LI   ++   
Sbjct: 740 MNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASL 799

Query: 255 -ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY------NLLQAMIKGEPIAD 307
            E  L   E  +   +     + + +M  L+S  ++ +AY      ++ + MI+ E   D
Sbjct: 800 PEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIEFELTVD 859

Query: 308 VGV 310
           +G 
Sbjct: 860 MGT 862


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 229/508 (45%), Gaps = 19/508 (3%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   +++++    + G+   A ++ + M D  +  N  T+  +I G VK   ++   +L 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           D+M   G   +   Y+V++ GLC+  +++    L  EM    + PD    S L    +  
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 254 GELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           GE   ++    E      M     C+ ++  L  +G + +A  +L+              
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE-------------- 180

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
            +++  G V P T  ++ +IN   +   L  A  +F +M       +   YN LI+GLC 
Sbjct: 181 -MLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              + ++ +L+ EME+SG  P+  T N++         +     ++  M+ +G +  V  
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              ++K  CK+GK  EA   L DM+ +   P+   Y++ I   I+    + A  L   + 
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G    +V YN+++ GLC++ ++ EAE+L   +  +GL P V +YN +I+  C  G+ D
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A+  L  M  K    P + TY TL+  L  AGR  D   L+ +M  K   P+   +  +
Sbjct: 419 KALELLQEM-NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 477

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           +    +C+         + M EKG+  D
Sbjct: 478 VDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 229/538 (42%), Gaps = 55/538 (10%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P A  +  +I  L   G   +A  +FD++   G+ VPN  +YN +++   K   ++    
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGV-VPNWITYNTMIDGHVKGGDLE-AGF 71

Query: 88  RLK-EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAF 145
           RL+ +M   G   +  T   LL   C +G+ D+   + +E+  H  + D   +SIL    
Sbjct: 72  RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
           ++ GE      L        + L   T  +L++G  K  +V KA Q+ + +  +G     
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
            +Y+ +I G C+ + L  A  ++ +MK   I PD    + LI                  
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING---------------- 235

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
                    LC                   L+ + K E   D+ +EM    K  V P+  
Sbjct: 236 ---------LCK------------------LEMVTKAE---DLVMEME---KSGVDPSVE 262

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +F+ +I+     G+L+   ++  +M Q G   +V  + +++   C + ++ E+  +L +M
Sbjct: 263 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 322

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                 P     NS+        D   A  LV KM+  G    +    LL+K LC+  + 
Sbjct: 323 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 382

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            EA   +  +  +G  PD+V Y+  I    +    D ALEL +++  +G  P +  Y+ +
Sbjct: 383 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 442

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           +S L  A RV + E L+ +M+ K + PS + Y ++++ + +  N  +       M EK
Sbjct: 443 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 500



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 559 RMLEKESGSP--DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           R + +  G+P  D  +Y  +I GL  +G+  DA+ +++EM + G  PN IT+  +I G  
Sbjct: 3   RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV 62

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           K     A       M   G KP++  +  L+S  
Sbjct: 63  KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGL 96


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 226/514 (43%), Gaps = 43/514 (8%)

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  L     KK +    + +  +M   G   +    ++++  LC  K++     ++  + 
Sbjct: 110 FNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMIL 169

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSID 290
             G  P+    + L+     EG++   V+  +I    D     + C  ++  L   G+  
Sbjct: 170 RKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTC 229

Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
            A  L +AMI G   +D G+           P   S+  II++L KDG ++ A   F EM
Sbjct: 230 NALKLHEAMINGN--SDFGI--------NCKPTVVSYSCIIDSLCKDGLVERAKEFFVEM 279

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
            + G   NV  Y +L+ GLC+++  EE+  L  EM + G  P   T + +   LC+   V
Sbjct: 280 KEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKV 339

Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
             A  L   M  +  EP  +   +LI+  C  G   E  +    MV +    D   YS  
Sbjct: 340 KEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSIL 399

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVA----------------------------Y 502
           +        V  A+ L+R++   G  P V+                             Y
Sbjct: 400 MKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIY 459

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
           N+ + GLCK   V+EA D+F  +       +VA +N LING C+S  ++ A    +R+  
Sbjct: 460 NVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCN 519

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC-KCDRP 621
            E+  PDV+TYT +I GLC  G+P  A  L+ EMEEKGCAPN +TF  L+ GLC   +RP
Sbjct: 520 -EALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           +   +  +M   K + PD    + ++   L + N
Sbjct: 579 KIVELLHKMAARK-LSPDASTLLIVMDILLKDEN 611



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 186/378 (49%), Gaps = 28/378 (7%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P   SY+C++++LCK   V+  +    EM++ G   +  T T LL   C++ ++++A 
Sbjct: 249 CKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAK 308

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            +F E++DHG + + V FS+L+ A  K G+V +A  L + M    +  + +T+ +LI G+
Sbjct: 309 RLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGY 368

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
                VD+  ++F  M       DA  Y +++   CK+ ++  A+ LY EM   GI P  
Sbjct: 369 CLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTV 428

Query: 241 EILSKLITSCSDEGELTLLVKEI-WEDRDVNTMTL-LCNSIMRILVSNGSIDQAYNLLQA 298
              SK+       G+   L  EI ++D  +++++  + N  +  L  NG + +A ++   
Sbjct: 429 ITYSKV-------GDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYG 481

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
           +   +  ++V +                F+ +IN + +  KL++A  LF  +       +
Sbjct: 482 LENCKFASNVAI----------------FNSLINGMCRSEKLEIAWELFNRLCNEALQPD 525

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V  Y  +I GLC   + +++Y+L  EMEE G  P   T N++ R LC   +    + L+ 
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585

Query: 419 KMRVQGHEPWVKHNTLLI 436
           KM  +   P    +TLLI
Sbjct: 586 KMAARKLSP--DASTLLI 601



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 237/580 (40%), Gaps = 110/580 (18%)

Query: 104 LTPLLQVYCNSGQF--DKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIER 160
           L   L++ C SG F   +AL  FN++I          F+ L  A +K  +      +  R
Sbjct: 73  LEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGR 132

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M+   +  N  +  +L++      RV +   +F  + + G+  +   +  ++ GLC   +
Sbjct: 133 MNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGK 192

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           +  A++++  M   G+                               D     + C  ++
Sbjct: 193 IGEAVRVFKIM---GVF------------------------------DCRPSAITCGVLI 219

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
             L   G+   A  L +AMI G   +D G+           P   S+  II++L KDG +
Sbjct: 220 SGLCRTGNTCNALKLHEAMINGN--SDFGI--------NCKPTVVSYSCIIDSLCKDGLV 269

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
           + A   F EM + G   NV  Y +L+ GLC+++  EE+  L  EM + G  P   T + +
Sbjct: 270 ERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVL 329

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVK------------------------------ 430
              LC+   V  A  L   M  +  EP  +                              
Sbjct: 330 IGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRC 389

Query: 431 -HN----TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA---AIGGLIDIKRVDL 482
            H+    ++L+K  CK  +   A     +M+  G  P ++ YS    A     +I+  D+
Sbjct: 390 QHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDM 449

Query: 483 ALE--------LFRD-ICAHGC----------------CPDVVAYNIIISGLCKAQRVAE 517
            L+        ++ D +C +GC                  +V  +N +I+G+C+++++  
Sbjct: 450 VLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEI 509

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
           A +LFN +  + L P V TY ++I G CK G   +A      M EK   +P+V+T+ TL+
Sbjct: 510 AWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEK-GCAPNVVTFNTLM 568

Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            GLC+       + L ++M  +  +P+  T + ++  L K
Sbjct: 569 RGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLK 608



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 152/369 (41%), Gaps = 47/369 (12%)

Query: 321 SPNTSSFDII-----INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
           +PNT S + +     IN    D  L  AL  F +M  +     +  +NNL   L    + 
Sbjct: 64  TPNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQY 123

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
                +   M   G      +LN +  CLC  + V     +   +  +G+ P  +  T L
Sbjct: 124 LHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNL 183

Query: 436 IKELCKHGKAMEAFRFLTDM------------------------------VQEGFL---- 461
           +K LC  GK  EA R    M                              + E  +    
Sbjct: 184 VKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNS 243

Query: 462 -------PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
                  P +V YS  I  L     V+ A E F ++   G  P+VV Y  ++ GLC A  
Sbjct: 244 DFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASE 303

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
             EA+ LF EM+  GL+P V T+++LI   CK G + +A      M+++    P   TY 
Sbjct: 304 WEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYV-EPSTRTYN 362

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
            LI+G C+AG  D+   ++  M  K C  +  ++  L+   CK      A++ +R M ++
Sbjct: 363 ILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDR 422

Query: 635 GMKPDMFVF 643
           G++P +  +
Sbjct: 423 GIQPTVITY 431



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 128/559 (22%), Positives = 219/559 (39%), Gaps = 62/559 (11%)

Query: 37  IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
           I C      + EA   F+Q+       P    +N L  AL K      V      M   G
Sbjct: 79  INCKSGDFTLHEALHFFNQMIHMQT-TPALSRFNNLFGALAKKKQYLHVISMCGRMNSIG 137

Query: 97  WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKAC 155
              +  +L  LL   C+  +  +   VF  I+  G+  +   F+ L+      G++ +A 
Sbjct: 138 LLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAV 197

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK--SGFASD----AAMYD 209
            + + M   + R +  T  VLI G  +      AL+L + M    S F  +       Y 
Sbjct: 198 RVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYS 257

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---SCSDEGELTLLVKEIWED 266
            II  LCK+  +E A + + EMK  GI P+    + L+    S S+  E   L  E+ + 
Sbjct: 258 CIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDH 317

Query: 267 ---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
               DV T ++L  ++ ++    G + +A  L   M++                  V P+
Sbjct: 318 GLLPDVVTFSVLIGALCKV----GKVKEASGLFDLMVQR----------------YVEPS 357

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           T +++I+I      G +D    +F  M    C  +   Y+ L+   C  + +  +  L R
Sbjct: 358 TRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYR 417

Query: 384 EMEESGFKPTHFTL----------------------------NSMFRCLCRRQDVVGALN 415
           EM + G +PT  T                             N     LC+   V  AL+
Sbjct: 418 EMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALD 477

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +   +        V     LI  +C+  K   A+     +  E   PD+V Y+  I GL 
Sbjct: 478 VFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLC 537

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
            + +   A +LF ++   GC P+VV +N ++ GLC      +  +L ++M  + L P  +
Sbjct: 538 KVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDAS 597

Query: 536 TYNLLINGWCKSGNIDQAM 554
           T  ++++   K  N  + +
Sbjct: 598 TLLIVMDILLKDENYHECL 616



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 192/467 (41%), Gaps = 50/467 (10%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +L  L+ CL SV  V E  ++F  + R+G   PN  ++  L++ LC    +       K 
Sbjct: 144 SLNILLNCLCSVKRVFEGFVVFGMILRKGY-RPNTRTFTNLVKGLCLEGKIGEAVRVFKI 202

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--------FSILLV 143
           M  +       T   L+   C +G    AL +   +I+ G  D  +        +S ++ 
Sbjct: 203 MGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMIN-GNSDFGINCKPTVVSYSCIID 261

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
           +  K G V++A E    M +  I  N  T+  L+HG    S  ++A +LF +M   G   
Sbjct: 262 SLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLP 321

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-------------- 249
           D   + V+IG LCK  +++ A  L+  M    + P     + LI                
Sbjct: 322 DVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIF 381

Query: 250 -------CS-DEGELTLLVKEIWEDRDVNTMTLLCNSIM-----RILVSNGSIDQAYNLL 296
                  C  D G  ++L+K   +D +V+   +L   +M       +++   +  A  L 
Sbjct: 382 LSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLF 441

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
             +   + + D             S + S +++ ++ L K+G +  AL +F  +      
Sbjct: 442 GEIQFQDMVLD-------------SISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFA 488

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            NV ++N+LI+G+C S +LE ++EL   +     +P   T   M   LC+      A +L
Sbjct: 489 SNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDL 548

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             +M  +G  P V     L++ LC + +  +    L  M      PD
Sbjct: 549 FLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPD 595


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 229/515 (44%), Gaps = 22/515 (4%)

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
           E +ER+    + L+   + +L+ G+V+  + D  +  FD+M  SG       Y+  IG L
Sbjct: 147 EFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVL 206

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTM 272
            KN   ++  + YS     G        S+ I++   + E   LV+ +  D D       
Sbjct: 207 VKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALC-QSERIELVERLLADMDKFGCFPD 265

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
              CN  +  L  +  +  A   L+ M                 +GT +P+  ++  ++ 
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMW---------------IRGT-NPDVVTYTTVVG 309

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
            L  + +   A+ L+ EM + G   ++     LI GLC S++++E++EL   M     + 
Sbjct: 310 CLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLEL 369

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
                N++     R   +  A  ++  MR  G EP V    + +   C  G   EA + +
Sbjct: 370 NVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLI 429

Query: 453 TDMVQEGFL-PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
            +M   G + PD   Y+  + GL    ++D A     D    G   D+V+ NI+I   CK
Sbjct: 430 EEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCK 489

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
           A++V+ A  LF EM  KG+     TY  LING    G    A     +ML K    P+V 
Sbjct: 490 AKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQML-KARVVPNVN 548

Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
            Y  ++  LC AG+ + A  ++ +M +K  +P+ ITF  LI  L KC R   A+  FR M
Sbjct: 549 LYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDM 608

Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             +G++PD   F  LIS  L E     A+EV + M
Sbjct: 609 TARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYM 643



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 255/572 (44%), Gaps = 64/572 (11%)

Query: 89  LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG----WVDEHVFSILLVA 144
           L+ ++  G    +     LL  Y  +G+FD  +  F+E++  G     VD + F  +LV 
Sbjct: 149 LERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVK 208

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
              +  V+K   +      C   L   T+   I    +  R++   +L   M K G   D
Sbjct: 209 NCCFDLVEKYYSVALDKGFC---LTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
               ++ +  LCK+ +L  AL+    M   G  PD    + ++    D  +    V E+W
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAV-ELW 324

Query: 265 ED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           E+   R +    + C  ++  L  +  +D+A+ L   M+       + +E+         
Sbjct: 325 EEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLS------LNLEL--------- 369

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N   ++ +I+  L+ G ++ A  +   M   GC  +V  YN  ++  CN+  ++E+ +L
Sbjct: 370 -NVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKL 428

Query: 382 LREMEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           + EME SG   P  ++ N M                                   +K LC
Sbjct: 429 IEEMEMSGIVNPDRYSYNQM-----------------------------------LKGLC 453

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  +   AF F++D ++ G   DIV  +  I      K+V  AL+LF+++   G   D V
Sbjct: 454 KAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAV 513

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I+GL        AE++F +M+   ++P+V  YN++++  CK+G  +QA     +M
Sbjct: 514 TYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQM 573

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
           ++KE  SPD+IT+ TLI  L    R  +AI L+ +M  +G  P+ +TF  LI+GL +  +
Sbjct: 574 IQKEV-SPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGK 632

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
              A   +  M E G+  D  V   LIS F S
Sbjct: 633 ATQAYEVWEYMLENGIILDRDVSDRLISMFKS 664



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 228/555 (41%), Gaps = 88/555 (15%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           FD++   G C      YN  +  L K+C  DLVE       D G+    +T +  +   C
Sbjct: 184 FDEMVTSG-CREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALC 242

Query: 113 NSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
            S +         E+++           LL    K+G           +  CNI ++   
Sbjct: 243 QSERI--------ELVER----------LLADMDKFG-------CFPDIWACNIYVD--- 274

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
            C+  H     +R+  AL+  + M   G   D   Y  ++G LC NKQ   A++L+ EM 
Sbjct: 275 -CLCKH-----NRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMV 328

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
             G+ PD                                  + C  ++  L  +  +D+A
Sbjct: 329 RRGLKPD---------------------------------IVACGVLIFGLCKSDKVDEA 355

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L   M+       + +E+          N   ++ +I+  L+ G ++ A  +   M  
Sbjct: 356 FELALRMLS------LNLEL----------NVCIYNALISGFLRSGSINKAFKIISVMRT 399

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTLNSMFRCLCRRQDVV 411
            GC  +V  YN  ++  CN+  ++E+ +L+ EME SG   P  ++ N M + LC+   + 
Sbjct: 400 NGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLD 459

Query: 412 GALNLVR-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            A   V   M V G    V  N +LI   CK  K   A +   +M  +G   D V Y   
Sbjct: 460 RAFGFVSDHMEVGGFCDIVSCN-ILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTL 518

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL  +    LA E+F  +      P+V  YNI++  LCKA +  +A+ +F +MI K +
Sbjct: 519 INGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEV 578

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
            P + T+N LI    K     +A + L R +      PD +T+  LI GL   G+   A 
Sbjct: 579 SPDIITFNTLIYWLGKCSRAIEA-IDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAY 637

Query: 591 MLWNEMEEKGCAPNR 605
            +W  M E G   +R
Sbjct: 638 EVWEYMLENGIILDR 652



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 194/465 (41%), Gaps = 56/465 (12%)

Query: 3   SILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLC 62
           S L ++ RI  +  L  D+ K  CF                                   
Sbjct: 239 SALCQSERIELVERLLADMDKFGCF----------------------------------- 263

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ ++ N  ++ LCK   +      L+ M   G   D  T T ++   C++ QF +A+ 
Sbjct: 264 -PDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVE 322

Query: 123 VFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           ++ E++  G   + V   +L+    K  +VD+A EL  RM   N+ LN   +  LI GF+
Sbjct: 323 LWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFL 382

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDF 240
           +   ++KA ++   M  +G   D   Y++ +   C    ++ A +L  EM+ SGI  PD 
Sbjct: 383 RSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDR 442

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQA 298
              ++++       +L      + +  +V      + CN ++        +  A  L + 
Sbjct: 443 YSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKE 502

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
                          M +KG +  +  ++  +IN L   G   LA  +F +M +   + N
Sbjct: 503 ---------------MGYKG-IQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPN 546

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
           V LYN ++  LC + + E++ ++  +M +    P   T N++   L +    + A++L R
Sbjct: 547 VNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFR 606

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
            M  +G EP       LI  L + GKA +A+     M++ G + D
Sbjct: 607 DMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILD 651



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 11/239 (4%)

Query: 42  SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK 101
           + G+++EA  L ++++  G+  P+ YSYN +L+ LCK+  +D     + +  + G   D 
Sbjct: 418 NTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDI 477

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIER 160
            +   L+  +C + +   AL +F E+   G   D   +  L+      G    A E+ E+
Sbjct: 478 VSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQ 537

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
           M    +  N   + +++H   K  + ++A ++F +M +   + D   ++ +I  L K  +
Sbjct: 538 MLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSR 597

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE---------DRDVN 270
              A+ L+ +M   GI PD      LI+   +EG+ T    E+WE         DRDV+
Sbjct: 598 AIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKAT-QAYEVWEYMLENGIILDRDVS 655


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 245/549 (44%), Gaps = 20/549 (3%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +++ Y   G    A   F  +   G     HV+S L+ A++   ++++A   + +M +  
Sbjct: 280 MVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 339

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I +   T+ +++ GF K  + D A   F +  +   + +A  Y  II   C+   ++ A 
Sbjct: 340 IEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAE 399

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            L  EM+  GI    +I   ++   +  G  E  L+V +  ++   +   +    ++ + 
Sbjct: 400 ALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLY 459

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
              G + +A   LQ            +  +M   G +  N  ++ ++IN  LK      A
Sbjct: 460 TKIGKVSKA---LQ------------ISKMMKMSG-IKHNMKTYSMLINGFLKLKDWANA 503

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            S+F + T+ G   +V LYNN+I   C  + ++ +  ++++M++  ++PT  T   +   
Sbjct: 504 FSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHG 563

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             R  ++  AL +   MR  G  P V     LI  L +  K  +A   L  M   G  P+
Sbjct: 564 FARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPN 623

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              Y+  + G   +   + A + F  +   G   DV  Y  ++   CK+ R+  A  +  
Sbjct: 624 EHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTK 683

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM  K +  +   YN+LI+GW + G++ +A   + +M  KE   PD+ TYT+ ++  C A
Sbjct: 684 EMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQM-RKEGVLPDIHTYTSFVNACCKA 742

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G    A  +  EME  G  PN  T+  LI G  +   P  AL  F  MK   +KPD   +
Sbjct: 743 GDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAY 802

Query: 644 VALISAFLS 652
             L+++ LS
Sbjct: 803 HCLMTSLLS 811



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/538 (21%), Positives = 228/538 (42%), Gaps = 33/538 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           + +++  +++ G++  A +  E M    I  +   +  LIH +     +++AL    KM 
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG-----SGITPDFEILSKLITSCSD 252
           + G       Y +I+GG  K  + + A   + E K      + +T    I +   T   D
Sbjct: 337 EEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMD 396

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             E   LV+E+    +V                   ID   ++   M+ G  +     + 
Sbjct: 397 RAEA--LVREM----EVQ-----------------GIDAPIDIYHTMMDGYTMIGNEEKC 433

Query: 313 LMIFKG----TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
           L++F        SP+  S+  +IN   K GK+  AL + + M   G   N+  Y+ LI+G
Sbjct: 434 LIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLING 493

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
                    ++ +  +  + G KP     N++    C   ++  A+ +V++M+ + + P 
Sbjct: 494 FLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPT 553

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
            +    +I    + G+   A      M + G +P +  Y+A I GL++ +++  A+ +  
Sbjct: 554 TRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILD 613

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +   G  P+   Y  ++ G        +A   F+ +  +GL   V TY  L+   CKSG
Sbjct: 614 QMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSG 673

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            + Q+ L +++ +  ++   +   Y  LIDG    G   +A  L  +M ++G  P+  T+
Sbjct: 674 RM-QSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTY 732

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            + +   CK    + A    + M+  G+KP++  +  LI+ +     P  A    +EM
Sbjct: 733 TSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEM 790



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/486 (22%), Positives = 208/486 (42%), Gaps = 20/486 (4%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           ++     +G  + A+  F + K E L   N  +Y  ++ A C++C++D  E  ++EM+  
Sbjct: 350 IVGGFAKMGKADAADHWFKEAK-EKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQ 408

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G          ++  Y   G  +K L VF+ + + G+    + +  L+  ++K G+V KA
Sbjct: 409 GIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKA 468

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            ++ + M    I+ N KT+ +LI+GF+K      A  +F+  TK G   D  +Y+ II  
Sbjct: 469 LQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITA 528

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTM 272
            C    ++ A+ +  +M+     P       +I   +  GE+   L + ++         
Sbjct: 529 FCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPT 588

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               N+++  LV    + +A  +L  M     +A VG            PN  ++  ++ 
Sbjct: 589 VHTYNALILGLVEKRKMAKAVAILDQM----NVAGVG------------PNEHTYTTLMQ 632

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
                G  + A   F  +   G   +V+ Y  L+   C S R++ +  + +EM       
Sbjct: 633 GYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPR 692

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
             F  N +     RR DV  A +L+++MR +G  P +   T  +   CK G   +A   +
Sbjct: 693 NTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEII 752

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
            +M   G  P++  Y+  I G       + AL  F ++      PD  AY+ +++ L   
Sbjct: 753 QEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSR 812

Query: 513 QRVAEA 518
              A++
Sbjct: 813 ATFAQS 818



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 169/396 (42%), Gaps = 36/396 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           +F+   ++GL  P+   YN ++ A C   ++D     +K+MQ   +     T  P++  +
Sbjct: 506 VFEDFTKDGL-KPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGF 564

Query: 112 CNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
             +G+  +AL +F+ +   G +   H ++ L++   +  ++ KA  ++++M+   +  NE
Sbjct: 565 ARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNE 624

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            T+  L+ G+      +KA Q F  +   G   D   Y+ ++   CK+ +++ AL +  E
Sbjct: 625 HTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKE 684

Query: 231 MKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILV 284
           M    I  +  + + LI   +  G   E   L++++ ++    D++T T   N+  +   
Sbjct: 685 MSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKA-- 742

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             G + +A  ++Q M           E   I      PN  ++  +IN   +    + AL
Sbjct: 743 --GDMQKATEIIQEM-----------EAFGI-----KPNLKTYTTLINGWARASMPEKAL 784

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY------ELLREMEESGFKPTHFTLN 398
           S F EM       +   Y+ L+  L +     +SY       + REM ES       T  
Sbjct: 785 SCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGLLSVCREMIESEMTVDMGTAV 844

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
              RCL + +   G   L   ++      W  HN L
Sbjct: 845 HWSRCLRKIERTGG--ELTEALQKTFPPDWTSHNAL 878



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 147/367 (40%), Gaps = 25/367 (6%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ++  F+    P    + +++    + G +  A   F  M   G   +  +Y++LI     
Sbjct: 262 VVTAFERIKKPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAV 321

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +EE+   +R+M+E G + T  T +           +VG    + K     H  W K 
Sbjct: 322 GRDMEEALHCVRKMKEEGIEMTIVTYSI----------IVGGFAKMGKADAADH--WFKE 369

Query: 432 NTLLIKEL------------CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
               +  L            C+      A   + +M  +G    I  Y   + G   I  
Sbjct: 370 AKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGN 429

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
            +  L +F  +   G  P V++Y  +I+   K  +V++A  +   M   G+  ++ TY++
Sbjct: 430 EEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSM 489

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LING+ K  +   A         K+   PDV+ Y  +I   C     D AI +  +M+++
Sbjct: 490 LINGFLKLKDWANAFSVFED-FTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKE 548

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
              P   TF+ +I G  +    R AL  F MM+  G  P +  + ALI   + +     A
Sbjct: 549 RYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKA 608

Query: 660 FEVLKEM 666
             +L +M
Sbjct: 609 VAILDQM 615


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 229/485 (47%), Gaps = 19/485 (3%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
           VF +LL A+ ++ + D+A E +  M +  I    +T   L+   +K +++  A  ++++M
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            K    S    ++++I  LC+  + + A      M+  G+ P+    + +I      G+ 
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 257 TLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
               K  +  +D+++       NS +  L     I++A  +L  +++             
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES------------ 316

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
              G V PN  +++ +I+     G LD A +   EM   G + +VF YN LI  L    R
Sbjct: 317 ---GLV-PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           +EE+ ++++EM E G +P   T N      CR  +   AL+L  +M  +   P V+  T 
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI    K  +  EA       ++EG LPDI+ ++A I G      +D A +L +++    
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD V +N ++ G C+ ++V EA+ L +EM  +G+ P   +YN LI+G+ K G++  A+
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                ML      P ++TY  LI G    G  D A  L  EM+ KG  P+  T++ +I  
Sbjct: 553 EVFDEMLSL-GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611

Query: 615 LCKCD 619
           +   D
Sbjct: 612 MKTND 616



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 172/350 (49%), Gaps = 1/350 (0%)

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K  +  +  +F+I+IN L ++GK   A      M   G   NV  YN +I+G C   + E
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            + ++ + M++   KP  +T NS    LC+ + +  A  ++ K+   G  P       LI
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              C  G   +AF +  +M+  G +  +  Y+  I  L   KR++ A ++ +++   G  
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDVV YNI I+G C+     +A  LF+EM+ K + P+V TY  LI+ + K   + +A   
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             + + KE   PD+I +  LIDG C+ G  D A  L  EM+     P+ +TF  L+ G C
Sbjct: 450 FKKSI-KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +  +   A      MKE+G+KPD   +  LIS +    +   A EV  EM
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 188/406 (46%), Gaps = 23/406 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+I++    + G+  KA + I  M+   ++ N  T+  +I+G+  + + + A ++F  M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
                  D   Y+  I  LCK +++E A  +  ++  SG+ P+    + LI  C ++G+L
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL 338

Query: 257 --TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                 ++   +R +       N ++  L     I++A ++++ M +     DV    + 
Sbjct: 339 DKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQ 398

Query: 315 I-------------------FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           I                    +  + P   ++  +I+   K  ++  A   F++  + G 
Sbjct: 399 INGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
           + ++ ++N LIDG C +  ++ +++LL+EM+ +   P   T N++ +  CR + V  A  
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518

Query: 416 LVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           L+ +M+ +G +P  + +NT LI    K G   +A     +M+  GF P ++ Y+A I G 
Sbjct: 519 LLDEMKERGIKPDHISYNT-LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
             I   D A EL R++ + G  PD   Y  +I  +     + E +D
Sbjct: 578 SKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 1/286 (0%)

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           +  EM +   K +  T N M   LCR      A + +  M V G +P V     +I   C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
             GK   A +    M  +   PD   Y++ I  L   +R++ A  +   +   G  P+ V
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +I G C    + +A    +EM+ +G++ SV TYNLLI+       I++A   +  M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
            EK    PDV+TY   I+G C  G    A+ L++EM EK   P   T+ +LI    K +R
Sbjct: 384 REK-GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              A   F+   ++GM PD+ +F ALI       N   AF++LKEM
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 221/471 (46%), Gaps = 29/471 (6%)

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           + A+ LF++M           ++ I+  L K ++   A+ L   +   GIT D   L+ L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 247 ITSCSDEGELTL-------LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
           I      G++TL       ++K  +   DV T+T    ++++ L   G + +A      +
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHP-DVITLT----TLIKGLCLRGEVKKALKFHDDV 165

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +  E   D                  S+  +IN L K G+   A+ L R + +     +V
Sbjct: 166 VALEFQLD----------------RISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDV 209

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +YN +ID LC +  + E+  L  EM      P   T  ++    C    ++ A+ L+ +
Sbjct: 210 VMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNE 269

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M+++   P V   ++LI  L K GK   A   L  M++    PD+V Y++ + G   +  
Sbjct: 270 MKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE 329

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           V  A  +F  +   G  P V +Y I+I GLCK + V EA  LF EM  K +IP+  T+N 
Sbjct: 330 VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNS 389

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           LI+G CKSG I      + +M ++ S   DVITY++LID LC     D AI L+ +M  +
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDR-SQLADVITYSSLIDALCKNCHLDQAIALFKKMITQ 448

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
              P+  T+  LI GLCK  R + A   F+ +  KG   D+  +  +IS F
Sbjct: 449 EIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGF 499



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 220/494 (44%), Gaps = 30/494 (6%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + +N +L +L K           K +   G   D  TL  L+  +C+ GQ   + SV
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
              I+  G+  D    + L+      GEV KA +  + +     +L+  ++  LI+G  K
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
                 A+QL   + +     D  MY++II  LCKNK +  A  LYSEM    I P+   
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 243 LSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
            + LI      G L   V  + E      + DV T ++L +++ +     G +  A  +L
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGK----EGKMKAAKIVL 302

Query: 297 QAMIKGEPIADVGVEMLMI-------------------FKGTVSPNTSSFDIIINTLLKD 337
             M+K     DV     ++                    +  V+P   S+ I+I+ L K 
Sbjct: 303 AVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKT 362

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +D A+SLF EM     + N   +N+LIDGLC S R+   ++L+ +M +        T 
Sbjct: 363 KMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITY 422

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
           +S+   LC+   +  A+ L +KM  Q  +P +   T+LI  LCK G+   A      ++ 
Sbjct: 423 SSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLI 482

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
           +G+  DI  Y+  I G       D AL L   +  +GC P+ + ++III  L +     +
Sbjct: 483 KGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDK 542

Query: 518 AEDLFNEMITKGLI 531
           AE L  EMI +GL+
Sbjct: 543 AEKLLREMIARGLL 556



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 4/212 (1%)

Query: 28  MSPGALGFLIRCLG--SVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           ++PG   + I   G     +V+EA  LF+++K + + +PN  ++N L++ LCKS  +  V
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV-IPNTITFNSLIDGLCKSGRIAYV 403

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
              + +M+D     D  T + L+   C +   D+A+++F ++I      D + ++IL+  
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDG 463

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K G +  A E+ + +      L+ +T+ V+I GF K    D+AL L  KM  +G   +
Sbjct: 464 LCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           A  +D+II  L +  + + A +L  EM   G+
Sbjct: 524 AITFDIIICALFEKDENDKAEKLLREMIARGL 555


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 245/546 (44%), Gaps = 57/546 (10%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG----WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
           LL  Y  +G+FD  +  F+E++  G     +D + +  +L+    +  V+K   +     
Sbjct: 161 LLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKG 220

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
            C   L   T+   I    + +R++   +L   M + GF+ D    ++ I  LCK  +L 
Sbjct: 221 LC---LTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLH 277

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
            ALQ+  +M+G G  PD  +    +  C                        LCN     
Sbjct: 278 DALQMVEKMRGKGTIPDV-VTYTTVVGC------------------------LCN----- 307

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
              N    +A  L + M+K      +G++          P+  +   +I  L K+ K++ 
Sbjct: 308 ---NKRFSEAVGLWEEMVK------MGLK----------PDVVACGALIFGLCKNSKVEE 348

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A  L   M  +    +V +YN LI G   +  ++++Y ++  M  +G +P   T N +  
Sbjct: 349 AFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLN 408

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C    +  A NL+ KM   G  P       L+K LCK  +  +AF F++D ++ G   
Sbjct: 409 HYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFC 468

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           DIV  +  I     +K+V  ALELF+++   G   D V Y  +I+GL        AE+LF
Sbjct: 469 DIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELF 528

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            +M+   + P+V  YN++++  CK G++ +A      M++KE   PD++TY TLI  L  
Sbjct: 529 EQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEI-LPDIVTYNTLIYWLGK 587

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             R  +A+ L+ +M  KG  P+ +TF  LI GL    R   A   +  M E G+  D  V
Sbjct: 588 NSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREV 647

Query: 643 FVALIS 648
              LIS
Sbjct: 648 SERLIS 653



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 227/565 (40%), Gaps = 89/565 (15%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDK-YTLTPLLQVY 111
           FD++   G C      YN  +  L K+C  DLVE      + YG    K   LTP     
Sbjct: 178 FDEMVMSG-CREFGIDYNRYIGVLIKNCCFDLVE------KYYGMALSKGLCLTPF---- 226

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
                                     +S  + A  +   ++   EL+  MD      +  
Sbjct: 227 -------------------------TYSRWISALCQSNRIELVEELLADMDRFGFSPDIW 261

Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
              + I    K++R+  ALQ+ +KM   G   D   Y  ++G LC NK+   A+ L+ EM
Sbjct: 262 ACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEM 321

Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
              G+ PD                                  + C +++  L  N  +++
Sbjct: 322 VKMGLKPD---------------------------------VVACGALIFGLCKNSKVEE 348

Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
           A+ L   M+       + +E+          + S ++ +I+   + G +D A ++   M 
Sbjct: 349 AFELASRMLS------LNIEL----------SVSIYNALISGFWRAGSIDKAYTIISFMR 392

Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
             GC   V  YN L++  C    +E++  L+ +ME SG  P  ++ N + + LC+   + 
Sbjct: 393 TNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLD 452

Query: 412 GALNLVR-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
            A   V   M V G    V  N +LI   CK  K   A     +M  +G   D V Y   
Sbjct: 453 KAFAFVSDHMEVGGFCDIVSCN-ILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTL 511

Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
           I GL  +   +LA ELF  +      P+V  YNI++  LCK   +  A+ +F  MI K +
Sbjct: 512 INGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEI 571

Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
           +P + TYN LI  W    +     L L + +  +   PD +T+  LI+GL   GR   A 
Sbjct: 572 LPDIVTYNTLIY-WLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAY 630

Query: 591 MLWNEMEEKGCAPNRITFMALITGL 615
            +W  M E G   +R     LI+ L
Sbjct: 631 EVWEYMMENGIILDREVSERLISVL 655



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 185/444 (41%), Gaps = 73/444 (16%)

Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI--IINTLLKD--------------- 337
           ++  +++G   ++  V      +     + S F I  I++ L  D               
Sbjct: 89  VVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRS 148

Query: 338 --------------------GKLDLALSLFREMTQIGCMQ-------------------- 357
                               GK D  +  F EM   GC +                    
Sbjct: 149 QGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDL 208

Query: 358 ---------------NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
                            F Y+  I  LC SNR+E   ELL +M+  GF P  +  N    
Sbjct: 209 VEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYID 268

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           CLC++  +  AL +V KMR +G  P V   T ++  LC + +  EA     +MV+ G  P
Sbjct: 269 CLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKP 328

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D+V   A I GL    +V+ A EL   + +      V  YN +ISG  +A  + +A  + 
Sbjct: 329 DVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTII 388

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           + M T G  P V TYN+L+N +C  G +++A   +++M E    +PD  +Y  L+ GLC 
Sbjct: 389 SFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKM-ETSGVNPDRYSYNQLLKGLCK 447

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             + D A    ++  E G   + ++   LI   CK  + ++AL  F+ M  KGM+ D   
Sbjct: 448 THQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVT 507

Query: 643 FVALISAFLSELNPPLAFEVLKEM 666
           +  LI+   S     LA E+ ++M
Sbjct: 508 YGTLINGLFSVGYYNLAEELFEQM 531



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 192/472 (40%), Gaps = 51/472 (10%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           ++P      I  L     +E    L   + R G   P+ ++ N  ++ LCK   +     
Sbjct: 223 LTPFTYSRWISALCQSNRIELVEELLADMDRFGFS-PDIWACNIYIDCLCKQNRLHDALQ 281

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFS 146
            +++M+  G   D  T T ++   CN+ +F +A+ ++ E++  G   + V    L+    
Sbjct: 282 MVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC 341

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K  +V++A EL  RM   NI L+   +  LI GF +   +DKA  +   M  +G      
Sbjct: 342 KNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVV 401

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
            Y++++   C    +E A  L ++M+ SG+ PD                           
Sbjct: 402 TYNILLNHYCTIGMMEKAENLITKMETSGVNPD--------------------------- 434

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
                     N +++ L     +D+A+  +   ++     D+                 S
Sbjct: 435 ------RYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDI----------------VS 472

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
            +I+I+   K  K+  AL LF+EM   G   +   Y  LI+GL +      + EL  +M 
Sbjct: 473 CNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQML 532

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           ++   P     N M   LC+  D+  A  +   M  +   P +     LI  L K+ +AM
Sbjct: 533 KAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAM 592

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD 498
           EA     DM  +G  PD + +   I GL+D  R  LA E++  +  +G   D
Sbjct: 593 EALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILD 644



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 146/350 (41%), Gaps = 20/350 (5%)

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNV-----------FLYNNLIDGLCNSNRLEESY 379
           ++ L +  ++D++  + R +    C + V           F+ N ++ GL +S      Y
Sbjct: 48  LSDLFRPVRMDISRVILRALESSTCSEPVELERLDIELDPFVVNLVVRGLSDSETAVRFY 107

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
                    GF  + F +  +   L    +       +  +R QG         +L+   
Sbjct: 108 WWAES--RPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGY 165

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
            + GK         +MV  G     + Y+  IG LI     DL  + +    + G C   
Sbjct: 166 VRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTP 225

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
             Y+  IS LC++ R+   E+L  +M   G  P +   N+ I+  CK   +  A+    +
Sbjct: 226 FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDAL----Q 281

Query: 560 MLEKESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           M+EK  G    PDV+TYTT++  LC   R  +A+ LW EM + G  P+ +   ALI GLC
Sbjct: 282 MVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC 341

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           K  +   A      M    ++  + ++ ALIS F    +   A+ ++  M
Sbjct: 342 KNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFM 391


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/579 (25%), Positives = 253/579 (43%), Gaps = 89/579 (15%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L   R +  L    QD+VKS C + P  L  +++ LG V +V +A  +F QVK    C P
Sbjct: 135 LDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRK-CRP 193

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
              +YN ++  L               MQ+                    G  +K   ++
Sbjct: 194 TAGTYNSVILML---------------MQE--------------------GHHEKVHELY 218

Query: 125 NEIIDHG--WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
           NE+   G  + D   +S L+ AF K    D A  L + M +  ++   K +  L+  + K
Sbjct: 219 NEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFK 278

Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
             +V++AL L  +M           Y  +I GL K+ ++E A  +Y  M   G  PD   
Sbjct: 279 LGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPD--- 335

Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
                                          +L N+++ IL  +  + +A  L +     
Sbjct: 336 ------------------------------VVLMNNLINILGRSDRLKEAVELFE----- 360

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD-GKLDLALSLFREMTQIGCMQNVFL 361
                   EM ++     +PN  +++ II +L +D      A S    M + G + + F 
Sbjct: 361 --------EMRLL---NCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFT 409

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ LIDG C +NR+E++  LL EM+E GF P      S+   L + +    A  L ++++
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                  V+   ++IK   K G+  EA     +M + G +PD+  Y+A I G++    +D
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  LFR +  +GC PD+ ++NII++GL +      A ++F +M +  + P   +YN ++
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
               ++G  ++A   +  M  K     D+ITY+++++ +
Sbjct: 590 GCLSRAGLFEEATKLMKEMNSK-GFEYDLITYSSILEAV 627



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 180/381 (47%), Gaps = 36/381 (9%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   +++ +I  L+++G  +    L+ EM   G C  +   Y+ LI      NR + +  
Sbjct: 193 PTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVR 252

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM+E+G +PT     ++     +   V  ALNLV +MR++   P V   T LI+ L 
Sbjct: 253 LFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLG 312

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  +A+    +M+++G  PD+V  +  I  L    R+  A+ELF ++    C P+VV
Sbjct: 313 KSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVV 372

Query: 501 AYNIIISGLCKAQRV-AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            YN II  L + +   +EA      M   G++PS  TY++LI+G+CK+  +++A+L L  
Sbjct: 373 TYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEE 432

Query: 560 MLEK----------------------------------ESGSPDVITYTTLIDGLCIAGR 585
           M EK                                    GS  V  Y  +I      GR
Sbjct: 433 MDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGR 492

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            ++A+ L+NEM++ GC P+   + ALITG+ + D    A   FR M+E G  PD+     
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI 552

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           +++       P  A E+  +M
Sbjct: 553 ILNGLARTGGPKRAMEMFAKM 573



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 229/522 (43%), Gaps = 53/522 (10%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM- 161
           L+ ++++       +KALS+F ++           ++ +++   + G  +K  EL   M 
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMC 222

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            + +   +  T+  LI  F K +R D A++LFD+M ++G    A +Y  ++G   K  ++
Sbjct: 223 SEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           E AL L  EM+     P     ++LI                                 R
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELI---------------------------------R 309

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +G ++ AY + + M+K                    P+    + +IN L +  +L 
Sbjct: 310 GLGKSGRVEDAYGVYKNMLKD----------------GCKPDVVLMNNLINILGRSDRLK 353

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLC-NSNRLEESYELLREMEESGFKPTHFTLNSM 400
            A+ LF EM  + C  NV  YN +I  L  +     E+   L  M++ G  P+ FT + +
Sbjct: 354 EAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   V  AL L+ +M  +G  P       LI  L K  +   A     ++ +   
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
              +  Y+  I       R + A+ LF ++   GC PDV AYN +I+G+ +A  + EA  
Sbjct: 474 SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFS 533

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           LF  M   G  P + ++N+++NG  ++G   +AM   ++M +  +  PD ++Y T++  L
Sbjct: 534 LFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKM-KSSTIKPDAVSYNTVLGCL 592

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
             AG  ++A  L  EM  KG   + IT+ +++  + K D  R
Sbjct: 593 SRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDR 634



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 228/491 (46%), Gaps = 25/491 (5%)

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
           C I  +E +  V I G VK   V+KAL +F ++        A  Y+ +I  L +    E 
Sbjct: 156 CAIGPSELSEIVKILGRVK--MVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213

Query: 224 ALQLYSEMKGSG-ITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
             +LY+EM   G   PD    S LI++    + +     L  E+ E+  +     +  ++
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKEN-GLQPTAKIYTTL 272

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
           M I    G +++A NL+              EM M       P   ++  +I  L K G+
Sbjct: 273 MGIYFKLGKVEEALNLVH-------------EMRM---RRCVPTVYTYTELIRGLGKSGR 316

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           ++ A  +++ M + GC  +V L NNLI+ L  S+RL+E+ EL  EM      P   T N+
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376

Query: 400 MFRCLCR-RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           + + L   +     A + + +M+  G  P     ++LI   CK  +  +A   L +M ++
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           GF P    Y + I  L   KR + A ELF+++  +     V  Y ++I    K  R  EA
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEA 496

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
             LFNEM   G IP V  YN LI G  ++  +D+A   L R +E+   +PD+ ++  +++
Sbjct: 497 MGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEA-FSLFRTMEENGCNPDINSHNIILN 555

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
           GL   G P  A+ ++ +M+     P+ +++  ++  L +      A    + M  KG + 
Sbjct: 556 GLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEY 615

Query: 639 DMFVFVALISA 649
           D+  + +++ A
Sbjct: 616 DLITYSSILEA 626


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 234/522 (44%), Gaps = 26/522 (4%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D A  L  RM       +   F  L    +        + LF +M   G     ++ ++
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDR 267
           +    C   +++ A  +      +GI  +    + L+     E ++T   +L K++  ++
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
                 ++  ++M  L   G  ++  +LL+ M                 +G   P+  ++
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIM----------------EQGNTKPDVRTY 206

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
            I+I+ L KD  LD A++L  EM Q     N+F YN+LIDGLC   + E+   LL EM  
Sbjct: 207 SIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN 266

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T + +   LC+   V  A  ++R M  +G EP +   + ++   C  G+   
Sbjct: 267 LNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDR 326

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R    +  +G  P+I  YS  I G    K +  A++LF +I   G  PD V Y+ I+ 
Sbjct: 327 ARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           GL +  R+ +A+ +F+EM+  G  P +  ++ L+ G+ K G +++AML  S+ LE+    
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSK-LERNRED 445

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK---CDRPRAA 624
            ++  YT +I+GLC   R  +A  ++ ++   G  P+  T+  +ITG C+    D  +  
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           L   R M++ G   +   +  ++  F            +KEM
Sbjct: 506 L---RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 208/482 (43%), Gaps = 25/482 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           V N+Y   CL   +   C+  ++ + LK     G  ++  T   LL       +   A+ 
Sbjct: 103 VTNSY---CLRHRI--DCAFSVLPIYLKT----GIPFNVVTFNTLLGGLFAENKVTDAVV 153

Query: 123 VFNEIIDHGW--VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
           +F +++       +E ++  ++   SK G  +K   L+  M+  N + + +T+ ++I   
Sbjct: 154 LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
            K   +D A+ L ++M +     +   Y+ +I GLCK  Q E    L SEM    I P+ 
Sbjct: 214 CKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273

Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
              S LI     EG++        ED D     ++   +   +++  +I   Y L   + 
Sbjct: 274 HTFSILIDGLCKEGKV--------EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVD 325

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +   + +V  +     KG + PN  S+ I+IN   K   L  A+ LF E++Q G   +  
Sbjct: 326 RARRVFNVLRD-----KG-IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
            Y+ ++ GL    R+ ++ ++  EM   G  P     +++     +   V  A+ L  K+
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRV 480
                +  +   T++I  LCK+ +  EA      +   G +PD+  Y+  I G       
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
           D    + R +  +GC  + + YN+I+ G  ++ +++E      EM  +G      T  +L
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 541 IN 542
           IN
Sbjct: 560 IN 561



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 195/430 (45%), Gaps = 55/430 (12%)

Query: 16  VLAQDVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           VL + +V+ + C  +    G ++  L   G  E+   L  ++  +G   P+  +Y+ +++
Sbjct: 153 VLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVID 211

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-V 133
           ALCK  ++D     L EM+      + +T   L+   C  GQ++K  ++ +E+++     
Sbjct: 212 ALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINP 271

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           + H FSIL+    K G+V+ A E++  M +  +  +  T+  ++ G+  + +VD+A ++F
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + +   G   +   Y ++I G CK K L  A+QL+ E+   G+ PD              
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPD-------------- 377

Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
                              T+  ++I+  L+  G I  A  +   M++  P  D+ +   
Sbjct: 378 -------------------TVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHST 418

Query: 314 MIF-------------------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
           ++F                   +     N S + ++IN L K+ ++  A ++F ++  IG
Sbjct: 419 LLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG 478

Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
            + +V  YN +I G C     +E   +LR+ME++G    + T N + +   R   +   +
Sbjct: 479 LIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIV 538

Query: 415 NLVRKMRVQG 424
           + +++M  +G
Sbjct: 539 SFMKEMAGRG 548



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 168/346 (48%), Gaps = 28/346 (8%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           L +++K++ +  PN ++YN L++ LCK    + V+  L EM +     + +T + L+   
Sbjct: 225 LLNEMKQKNIP-PNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+ + A  V   +I+ G   D   +S ++  +   G+VD+A  +   + D  I+ N 
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            ++ +LI+G+ KK  + KA+QLF ++++ G   D   Y  I+ GL +  ++  A +++ E
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403

Query: 231 MKGSGITPDFEILSKLITSCSDEG---ELTLLVKEI---WEDRDVNTMTLLCNSIMRILV 284
           M   G TPD  + S L+      G   E  LL  ++    ED +++  T++ N     L 
Sbjct: 404 MLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVING----LC 459

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            N  + +A+ +       E +  +G+           P+  +++++I    ++G  D   
Sbjct: 460 KNDRVREAHAIF------EKLPSIGL----------IPDVRTYNVMITGFCREGLFDEVK 503

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
            + R+M   GC  N   YN ++ G   SN++ E    ++EM   GF
Sbjct: 504 GILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 37/241 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G V+ A  +F+ ++ +G+  PN +SY+ L+   CK  ++        E+   G   D  T
Sbjct: 322 GQVDRARRVFNVLRDKGI-KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
            + +L      G+   A  +F+E++  G   D  + S LL  + K+G V++A  L  +++
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440

Query: 163 ----DCNI--------------RLNE-----------------KTFCVLIHGFVKKSRVD 187
               D NI              R+ E                 +T+ V+I GF ++   D
Sbjct: 441 RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +   +  KM  +G  ++   Y+VI+ G  ++ ++   +    EM G G + D      LI
Sbjct: 501 EVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560

Query: 248 T 248
            
Sbjct: 561 N 561


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 232/529 (43%), Gaps = 26/529 (4%)

Query: 91  EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
           +MQ+ G      T+  +L++    G  + A +VF+E+   G V D   + ++++   + G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
           ++ +A   +  M       +  T  +++    +   V++A+  F KM   GF  +   + 
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCK   ++ A ++  EM  +G  P+    + LI           L K  W ++  
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG---------LCKRGWTEKAF 342

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF----KGTVSPNTS 325
                    +   LV + +     +   +MI G    D      M+F    +  + PN +
Sbjct: 343 R--------LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           ++  +IN   K G    A  L   M   G M N++ YN  ID LC  +R  E+YELL + 
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
              G +    T   + +  C++ D+  AL    +M   G E  ++ N +LI   C+  K 
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 514

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
            E+ R    +V  G +P    Y++ I        +DLAL+ F ++  HGC PD   Y  +
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           ISGLCK   V EA  L+  MI +GL P   T   L   +CK  +   AM+    +LE   
Sbjct: 575 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI----LLEPLD 630

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
               + T  TL+  LC   +   A + + ++ EK  + +R+T  A  T 
Sbjct: 631 KKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 679



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 228/536 (42%), Gaps = 86/536 (16%)

Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
             V   +L  FS+ G +++A  ++  M +  +  +  T   ++   V+   ++ A  +FD
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206

Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG 254
           +M+  G   D++ Y +++ G  ++ +++ A +  + M   G  PD               
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPD--------------- 251

Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
                                C  I+  L  NG +++A    + MI      D+G +   
Sbjct: 252 ------------------NATCTLILTALCENGLVNRAIWYFRKMI------DLGFK--- 284

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                  PN  +F  +I+ L K G +  A  +  EM + G   NV+ +  LIDGLC    
Sbjct: 285 -------PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337

Query: 375 LEESYEL-LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            E+++ L L+ +    +KP   T  SM    C+   +  A  L  +M+ QG  P V   T
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI   CK G    A+  +  M  EGF+P+I  Y+AAI  L    R   A EL     + 
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457

Query: 494 GCCPDVVAY-----------------------------------NIIISGLCKAQRVAEA 518
           G   D V Y                                   NI+I+  C+ +++ E+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
           E LF  +++ GLIP+  TY  +I+ +CK G+ID A+     M ++    PD  TY +LI 
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVPDSFTYGSLIS 576

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           GLC     D+A  L+  M ++G +P  +T + L    CK +    A++    + +K
Sbjct: 577 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 8/374 (2%)

Query: 283 LVSNGSIDQAYNLLQAMIK-----GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           L++NG++ +A+ +++ M++     G     VG+ M M  +G ++P++ + + ++   ++ 
Sbjct: 137 LLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQG-LTPSSITMNCVLEIAVEL 195

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G ++ A ++F EM+  G + +   Y  ++ G     +++E+   L  M + GF P + T 
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
             +   LC    V  A+   RKM   G +P + + T LI  LCK G   +AF  L +MV+
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELF-RDICAHGCCPDVVAYNIIISGLCKAQRVA 516
            G+ P++  ++A I GL      + A  LF + + +    P+V  Y  +I G CK  ++ 
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            AE LF+ M  +GL P+V TY  LING CK+G+  +A   L  ++  E   P++ TY   
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE-LMNLMGDEGFMPNIYTYNAA 434

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           ID LC   R  +A  L N+    G   + +T+  LI   CK +    AL  F  M + G 
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494

Query: 637 KPDMFVFVALISAF 650
           + DM +   LI+AF
Sbjct: 495 EADMRLNNILIAAF 508



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 203/475 (42%), Gaps = 51/475 (10%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++  F +  R+++A+ +   M   G    +   + ++    +   +E A  ++ EM   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           + PD      ++  C                                   +G I +A   
Sbjct: 213 VVPDSSSYKLMVIGC---------------------------------FRDGKIQEADRW 239

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  MI+               +G + P+ ++  +I+  L ++G ++ A+  FR+M  +G 
Sbjct: 240 LTGMIQ---------------RGFI-PDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 283

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N+  + +LIDGLC    +++++E+L EM  +G+KP  +T  ++   LC+R     A  
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343

Query: 416 LVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           L  K+ R   ++P V   T +I   CK  K   A    + M ++G  P++  Y+  I G 
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403

Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
                   A EL   +   G  P++  YN  I  LCK  R  EA +L N+  + GL    
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463

Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
            TY +LI   CK  +I+QA+    RM  K     D+     LI   C   +  ++  L+ 
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRM-NKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522

Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
            +   G  P + T+ ++I+  CK      AL +F  MK  G  PD F + +LIS 
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 152/292 (52%)

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           RL E+  ++ +M+  G  P+  T+N +         +  A N+  +M V+G  P      
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           L++    + GK  EA R+LT M+Q GF+PD    +  +  L +   V+ A+  FR +   
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+++ +  +I GLCK   + +A ++  EM+  G  P+V T+  LI+G CK G  ++A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                +++  ++  P+V TYT++I G C   + + A ML++ M+E+G  PN  T+  LI 
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           G CK      A     +M ++G  P+++ + A I +   +   P A+E+L +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 227/547 (41%), Gaps = 56/547 (10%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           +GL+E A  +FD++   G+ VP++ SY  ++    +   +   +  L  M   G+  D  
Sbjct: 195 LGLIEYAENVFDEMSVRGV-VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNA 253

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
           T T +L   C +G  ++A+  F ++ID G+    + F+ L+    K G + +A E++E M
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQ 220
                + N  T   LI G  K+   +KA +LF K+ +S  +  +   Y  +IGG CK  +
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
           L  A  L+S MK  G+ P                             +VNT T L N   
Sbjct: 374 LNRAEMLFSRMKEQGLFP-----------------------------NVNTYTTLINGHC 404

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
           +     GS  +AY L+  M         G E  M       PN  +++  I++L K  + 
Sbjct: 405 KA----GSFGRAYELMNLM---------GDEGFM-------PNIYTYNAAIDSLCKKSRA 444

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A  L  +    G   +   Y  LI   C  N + ++      M ++GF+      N +
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 504

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               CR++ +  +  L + +   G  P  +  T +I   CK G    A ++  +M + G 
Sbjct: 505 IAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC 564

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           +PD   Y + I GL     VD A +L+  +   G  P  V    +    CK    A A  
Sbjct: 565 VPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 624

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L   +  K  I +V T   L+   C    +  A L   ++LEK+S S D +T        
Sbjct: 625 LLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDS-SADRVTLAAFTTAC 680

Query: 581 CIAGRPD 587
             +G+ +
Sbjct: 681 SESGKNN 687



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 36/457 (7%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           GLV  A   F ++   G   PN  ++  L++ LCK  S+      L+EM   GW  + YT
Sbjct: 266 GLVNRAIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 324

Query: 104 LTPLLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
            T L+   C  G  +KA  +F +++  D    + H ++ ++  + K  ++++A  L  RM
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            +  +  N  T+  LI+G  K     +A +L + M   GF  +   Y+  I  LCK  + 
Sbjct: 385 KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN-TMTLLCN--- 277
             A +L ++    G+              +D    T+L++E  +  D+N  +   C    
Sbjct: 445 PEAYELLNKAFSCGLE-------------ADGVTYTILIQEQCKQNDINQALAFFCRMNK 491

Query: 278 ----SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
               + MR+   N  +  A+   + M + E +  + V + +I      P   ++  +I+ 
Sbjct: 492 TGFEADMRL---NNILIAAFCRQKKMKESERLFQLVVSLGLI------PTKETYTSMISC 542

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K+G +DLAL  F  M + GC+ + F Y +LI GLC  + ++E+ +L   M + G  P 
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
             T  ++    C+R D   A+ L+  +     + W++    L+++LC   K   A  F  
Sbjct: 603 EVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQ 659

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
            ++++    D V  +A      +  + +L  +L   I
Sbjct: 660 KLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 132/268 (49%), Gaps = 3/268 (1%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G  E+A  LF ++ R     PN ++Y  ++   CK   ++  EM    M++ 
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKA 154
           G   +  T T L+  +C +G F +A  + N + D G++   + ++  + +  K     +A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            EL+ +   C +  +  T+ +LI    K++ +++AL  F +M K+GF +D  + +++I  
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM-- 272
            C+ K+++ + +L+  +   G+ P  E  + +I+    EG++ L +K     +    +  
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +    S++  L     +D+A  L +AMI
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMI 595



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%)

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R+ EA  +  +M  +GL PS  T N ++    + G I+ A      M       PD  +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM-SVRGVVPDSSSY 220

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             ++ G    G+  +A      M ++G  P+  T   ++T LC+      A+ +FR M +
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G KP++  F +LI     + +   AFE+L+EM
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 237/547 (43%), Gaps = 86/547 (15%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           + +VY ++G F++ L VF+ ++  G                                  +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKG----------------------------------L 185

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
            ++E++  V +    K+ R+D  L++F +M  SG         +++ GLC+  ++E + +
Sbjct: 186 SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKK 245

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           L  E    GI P                          E    NT               
Sbjct: 246 LIKEFSVKGIKP--------------------------EAYTYNT--------------- 264

Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
                   ++ A +K    + V   + ++ K  V  N  ++ +++   +K+GK+  A  L
Sbjct: 265 --------IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F EM + G   +V +Y +LI   C    ++ ++ L  E+ E G  P+ +T  ++   +C+
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376

Query: 407 RQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             ++  A  L+ +M+ +G +   V  NTL I   C+ G   EA      M Q+GF  D+ 
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTL-IDGYCRKGMVDEASMIYDVMEQKGFQADVF 435

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
             +        +KR D A +    +   G     V+Y  +I   CK   V EA+ LF EM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
            +KG+ P+  TYN++I  +CK G I +A    + M E     PD  TYT+LI G CIA  
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM-EANGMDPDSYTYTSLIHGECIADN 554

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            D+A+ L++EM  KG   N +T+  +I+GL K  +   A   +  MK KG   D  V+ A
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614

Query: 646 LISAFLS 652
           LI +  S
Sbjct: 615 LIGSMHS 621



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 209/454 (46%), Gaps = 25/454 (5%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+ EE   +FD + ++GL + +  S    L A  K   +DL     + M D G     Y+
Sbjct: 168 GMFEEGLRVFDYMVKKGLSI-DERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMD 162
           LT +++  C  G+ +K+  +  E    G   E + ++ ++ A+ K  +      +++ M 
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286

Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
              +  N+ T+ +L+   VK  ++  A +LFD+M + G  SD  +Y  +I   C+   ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSI 279
            A  L+ E+   G++P       LI      GE+    +L+ E+ + + VN   ++ N++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM-QSKGVNITQVVFNTL 405

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGV-------------------EMLMIFKGTV 320
           +      G +D+A  +   M +    ADV                      +  + +G V
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
             +T S+  +I+   K+G ++ A  LF EM+  G   N   YN +I   C   +++E+ +
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L   ME +G  P  +T  S+    C   +V  A+ L  +M ++G +      T++I  L 
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
           K GK+ EAF    +M ++G+  D   Y+A IG +
Sbjct: 586 KAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 178/423 (42%), Gaps = 52/423 (12%)

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           + R+ V NG  ++   +   M+K               KG +S +  S  + +    K  
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVK---------------KG-LSIDERSCIVFLVAAKKRR 203

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           ++DL L +FR M   G    V+    +++GLC    +E+S +L++E    G KP  +T N
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263

Query: 399 SMFRCLCRRQD---VVGALNLVRK--------------------------------MRVQ 423
           ++     +++D   V G L +++K                                MR +
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G E  V   T LI   C+ G    AF    ++ ++G  P    Y A I G+  +  +  A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
             L  ++ + G     V +N +I G C+   V EA  +++ M  KG    V T N + + 
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443

Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
           + +    D+A   L RM+E        ++YT LID  C  G  ++A  L+ EM  KG  P
Sbjct: 444 FNRLKRYDEAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502

Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
           N IT+  +I   CK  + + A      M+  GM PD + + +LI       N   A  + 
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562

Query: 664 KEM 666
            EM
Sbjct: 563 SEM 565


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 160/595 (26%), Positives = 267/595 (44%), Gaps = 49/595 (8%)

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIID-HGWVDEHVFSILLVAFSKWGEVDKACELI 158
           D ++   LL V    G+ + A  V++E++D +G VD +   I++    K G+V+   +LI
Sbjct: 136 DVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLI 195

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E+        N   +  LI G+ KK   ++A  LF ++   GF      Y  II G CK 
Sbjct: 196 EKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKK 255

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITS-----CSDEGELTL--LVKEIWEDRDVNT 271
            + E+  +L  EM   G+     I + +I +     C  E   T+  ++K    D D+ T
Sbjct: 256 GKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGC-DPDMAT 314

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GEPIADVGVE 311
             +L         S G + +A  LL+  IK                    GE +  + + 
Sbjct: 315 YNILITGS----CSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLL 370

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           + M  +G   P+  ++  +I+ L+  G++D+AL++  +M + G + +  +YN L+ GLC 
Sbjct: 371 IKMSERGH-KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCK 429

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
             RL  +  LL EM +    P  F   ++     R  D   A  L      +G +P V  
Sbjct: 430 KGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVG 489

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              +IK  CK G   +A      M+Q    PD   YS  I G I +  +  AL +F  + 
Sbjct: 490 YNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMV 549

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
              C P+VV Y ++I+G C +  +  AE  F +M++  L P+V TY +LI  +CK  N+ 
Sbjct: 550 KGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLT 609

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLC----------IAGRPDDAIML--WNEMEEK 599
           +A     +ML  E   P+ +TY  L++GL            + + +++++L  +  M   
Sbjct: 610 KACSFFEQML-MEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISD 668

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFR-MMKEKGMKPDMFVFVALISAFLSE 653
           G      ++ +++  LC+    + AL H R  M  KG  PD    VAL+     E
Sbjct: 669 GWDRRAASYNSILICLCQHKMVKHAL-HLRDKMMSKGFLPDPVSLVALLHGLCLE 722



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 232/565 (41%), Gaps = 86/565 (15%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVKKSRVDKALQLFDKM 196
           FS+++  F+  G VD+A E        +  + +   C  L++  VK  +V+ A +++D+M
Sbjct: 104 FSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEM 163

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
                  D     +++ GLCK  ++E   +L  +  G G  P+    + LI     +G+ 
Sbjct: 164 VDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGD- 222

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                           T   N + + L   G +                           
Sbjct: 223 ----------------TERANVLFKELKMKGFL--------------------------- 239

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P   ++  IIN   K GK ++   L  EM++ G   ++ +YNN+ID         
Sbjct: 240 -----PTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRI 294

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+ + +  M +SG  P   T N +    C   +V  A  L+ +   +G  P     T LI
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK G+ + A   L  M + G  PD+V Y+A I GLI    VD+AL +   +   G  
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVL 414

Query: 497 PDVVAYNIIISGLCKAQRVA-----------------------------------EAEDL 521
           PD   YN+++SGLCK  R+                                    EA+ L
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474

Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLC 581
           F   I KG+ P V  YN +I G+CK G +  A+LC  RM++    SPD  TY+T+IDG  
Sbjct: 475 FELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLH-SPDEFTYSTIIDGYI 533

Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
                  A+ ++  M +  C PN +T+  LI G C       A   F+ M    +KP++ 
Sbjct: 534 KMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVV 593

Query: 642 VFVALISAFLSELNPPLAFEVLKEM 666
            +  LI  F   +N   A    ++M
Sbjct: 594 TYTILIGCFCKGVNLTKACSFFEQM 618



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 146/616 (23%), Positives = 266/616 (43%), Gaps = 72/616 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++ L   G VE+   L ++    G C+PN   YN L++  CK    +   +  KE++  
Sbjct: 178 MVKGLCKEGKVEDGWKLIEKRWGRG-CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK 236

Query: 96  GWGYDKYTLTPLLQVYCNSGQF---------------DKALSVFNEIIDH---------- 130
           G+     T   ++  +C  G+F               D ++ ++N IID           
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296

Query: 131 ----GWV-------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
               GW+       D   ++IL+      GEV KA +L+E+     +  N+ ++  LIH 
Sbjct: 297 ADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHN 356

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
           + K+    +AL L  KM++ G   D   Y  +I GL    ++++AL + ++M   G+ PD
Sbjct: 357 YCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPD 416

Query: 240 FEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
             I + L++    +G L    +L+ E+  D++V     +  +++   + +G  ++A  L 
Sbjct: 417 ANIYNVLMSGLCKKGRLPAAKVLLAEML-DQNVAPDAFITATLVDGFIRHGDFEEAKKLF 475

Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
           +               L I KG + P    ++ +I    K G +  AL  F+ M Q    
Sbjct: 476 E---------------LTIEKG-IDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHS 519

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            + F Y+ +IDG    N L  +  +   M +   KP   T   +    C   D+  A   
Sbjct: 520 PDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKT 579

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL-- 474
            ++M     +P V   T+LI   CK     +A  F   M+ E  LP+ V Y+  + GL  
Sbjct: 580 FKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTN 639

Query: 475 -----IDIKRVD-----LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
                I  +R +     L LE F  + + G      +YN I+  LC+ + V  A  L ++
Sbjct: 640 NVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDK 699

Query: 525 MITKGLIPSVATYNLLINGWCKSG-NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           M++KG +P   +   L++G C  G + D   +   ++ E+E      + Y+  +D     
Sbjct: 700 MMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQV--AVKYSEKLDAFLSQ 757

Query: 584 GRPDDAIMLWNEMEEK 599
           G+  +A ++ + + ++
Sbjct: 758 GQTSEASLILHSLADQ 773


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/582 (25%), Positives = 250/582 (42%), Gaps = 94/582 (16%)

Query: 5   LSRARRIAPLRVLAQDVVK-SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCV 63
           L  AR    +    Q+VV+ +   + P  L  L++ LG   +V +A  +F Q K    C 
Sbjct: 136 LEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRK-CK 194

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P + +YN ++  L               MQ+                    GQ +K   V
Sbjct: 195 PTSSTYNSVILML---------------MQE--------------------GQHEKVHEV 219

Query: 124 FNEIIDHG--WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           + E+ + G  + D   +S L+ ++ K G  D A  L + M D  ++  EK +  L+  + 
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +V+KAL LF++M ++G +     Y  +I GL K  ++E A  LY  M   G+TPD  
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPD-- 337

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                           +  N++M IL   G +++  N+   M  
Sbjct: 338 -------------------------------VVFLNNLMNILGKVGRLEELTNVFNEM-- 364

Query: 302 GEPIADVGVEMLMIFKGT--VSPNTSSFDIIINTLLKD-GKLDLALSLFREMTQIGCMQN 358
                           GT   +P   S++ +I  L +    +    S F +M   G   +
Sbjct: 365 ----------------GTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPS 408

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
            F Y+ LIDG C +NR+E++  LL EM+E GF P      S+   L + +    A  L +
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +++        +   ++IK   K GK  EA     +M  +G  PD+  Y+A + G++   
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
            V+ A  L R +  +GC  D+ ++NII++G  +      A ++F  M   G+ P   TYN
Sbjct: 529 MVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYN 588

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            L+  +  +G  ++A   +  M +K     D ITY++++D +
Sbjct: 589 TLLGCFAHAGMFEEAARLMREMKDK-GFEYDAITYSSILDAV 629



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 189/444 (42%), Gaps = 21/444 (4%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDR 267
           ++  L + K +  AL ++ + KG    P     + +I     EG+   +  +  E+  + 
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           D    T+  ++++      G  D A  L   M                    + P    +
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDN----------------CMQPTEKIY 271

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             ++    K GK++ AL LF EM + GC   V+ Y  LI GL  + R+EE+Y+L + M  
Sbjct: 272 TTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLT 331

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKAM 446
            G  P    LN++   L +   +    N+  +M      P V  +NT++           
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVS 391

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           E   +   M  +G  P    YS  I G     RV+ AL L  ++   G  P   AY  +I
Sbjct: 392 EVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
           + L KA+R   A +LF E+       S   Y ++I  + K G + +A+   + M  + SG
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PDV  Y  L+ G+  AG  ++A  L  +MEE GC  +  +   ++ G  +   PR A+ 
Sbjct: 512 -PDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIE 570

Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
            F  MK  G+KPD   +  L+  F
Sbjct: 571 MFETMKHCGIKPDGVTYNTLLGCF 594



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 178/382 (46%), Gaps = 38/382 (9%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYE 380
           P +S+++ +I  L+++G+ +    ++ EM   G C  +   Y+ LI       R + +  
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L  EM+++  +PT     ++     +   V  AL+L  +M+  G  P V   T LIK L 
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  EA+    +M+ +G  PD+V  +  +  L  + R++    +F ++    C P VV
Sbjct: 315 KAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVV 374

Query: 501 AYNIIISGLCKAQR-VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           +YN +I  L +++  V+E    F++M   G+ PS  TY++LI+G+CK+  +++A+L L  
Sbjct: 375 SYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434

Query: 560 MLEKESGSPDVITYTTLIDGLCIA-----------------------------------G 584
           M EK    P    Y +LI+ L  A                                   G
Sbjct: 435 MDEK-GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
           +  +A+ L+NEM+ +G  P+   + AL++G+ K      A    R M+E G   D+    
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHN 553

Query: 645 ALISAFLSELNPPLAFEVLKEM 666
            +++ F     P  A E+ + M
Sbjct: 554 IILNGFARTGVPRRAIEMFETM 575



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 208/487 (42%), Gaps = 58/487 (11%)

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           L+    +   V KAL +F +         ++ Y+ +I  L +  Q E   ++Y+EM   G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 236 -ITPDFEILSKLITSCSDEGELTLLVKEIWEDRD--VNTMTLLCNSIMRILVSNGSIDQA 292
              PD    S LI+S    G     ++   E +D  +     +  +++ I    G +++A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
            +L + M +                   SP   ++  +I  L K G+++ A  L++ M  
Sbjct: 288 LDLFEEMKRA----------------GCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLT 331

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +V   NNL++ L    RLEE   +  EM      PT  + N++ + L   +  V 
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVS 391

Query: 413 ALN-LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
            ++    KM+  G  P     ++LI   CK  +  +A   L +M ++GF P    Y + I
Sbjct: 392 EVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451

Query: 472 GGLIDIKRVDLALELFRDI---------------------CA--------------HGCC 496
             L   KR + A ELF+++                     C                G  
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV AYN ++SG+ KA  V EA  L  +M   G    + ++N+++NG+ ++G   +A+  
Sbjct: 512 PDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEM 571

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              M  K  G  PD +TY TL+     AG  ++A  L  EM++KG   + IT+ +++  +
Sbjct: 572 FETM--KHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629

Query: 616 CKCDRPR 622
              D  +
Sbjct: 630 GNMDHEK 636



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 3/306 (0%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + L+  L  +  + ++  +  + +    KPT  T NS+   L +         +  +M  
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225

Query: 423 QGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           +G   P     + LI    K G+   A R   +M      P    Y+  +G    + +V+
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL+LF ++   GC P V  Y  +I GL KA RV EA DL+  M+T GL P V   N L+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLM 345

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW-NEMEEKG 600
           N   K G +++     + M      +P V++Y T+I  L  +  P   +  W ++M+  G
Sbjct: 346 NILGKVGRLEELTNVFNEMGTWRC-TPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADG 404

Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
            +P+  T+  LI G CK +R   AL+    M EKG  P    + +LI+A         A 
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464

Query: 661 EVLKEM 666
           E+ KE+
Sbjct: 465 ELFKEL 470



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/466 (22%), Positives = 189/466 (40%), Gaps = 57/466 (12%)

Query: 1   MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
           +   L RA+ ++    +       +C  +      +I  L   G  E+ + ++ ++  EG
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227

Query: 61  LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
            C P+  +Y+ L+ +  K    D       EM+D      +   T LL +Y   G+ +KA
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287

Query: 121 LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERM-------------DDCNI 166
           L +F E+   G     + ++ L+    K G V++A +L + M             +  NI
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNI 347

Query: 167 -----RLNEKT-----------------FCVLIHG-FVKKSRVDKALQLFDKMTKSGFAS 203
                RL E T                 +  +I   F  K+ V +    FDKM   G + 
Sbjct: 348 LGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSP 407

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LV 260
               Y ++I G CK  ++E AL L  EM   G  P       LI +            L 
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
           KE+ E+   N  + +   +++     G + +A +L   M                 +G+ 
Sbjct: 468 KELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN---------------QGS- 510

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  +++ +++ ++K G ++ A SL R+M + GC  ++  +N +++G   +     + E
Sbjct: 511 GPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIE 570

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
           +   M+  G KP   T N++  C         A  L+R+M+ +G E
Sbjct: 571 MFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFE 616


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 263/600 (43%), Gaps = 86/600 (14%)

Query: 3   SILSRARRI-APLRVLAQDVVKS-RCFMS-PGALGFLIRCLGSVGLV------------- 46
           +IL RA R  +P R   +  + + + F S P +   L+ CL S  L+             
Sbjct: 168 AILVRALRFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISPSPE 227

Query: 47  -----------EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
                      +EA  LF ++  +  C     SYN LL+ALC +  +        EM   
Sbjct: 228 SCNAVLCRLPLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEMASP 282

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D  T   ++  YC   + + A+ + +E+   G  ++   ++ ++      G+V  A
Sbjct: 283 P---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++E M    + L+   F  ++ GF +K  +  A   FD+M K G A+D   Y  +I G
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+  +L+ A ++  EM+  G+                             D D  T T+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGL-----------------------------DVDAVTYTV 430

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L +   ++    G + +A+ +   M++                  V+PN  ++  + + L
Sbjct: 431 LIDGYCKV----GKMTEAFLVHNKMVQKR----------------VTPNVVTYTALSDGL 470

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A  L  EM   G   N+F YN+LI+GLC +  LE++   + +M+E+G KP  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T  ++   LC+ +++  A +L+++M  +G +P +    +L+   C  G+     R L  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+++   P+   Y++ +      K +    E+++ + +    P+   YNI+I G CKA+ 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITY 573
           + EA    +EMI KG   + ++YN LI    K     +A     +M  E+ +  PDV  +
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 232/498 (46%), Gaps = 30/498 (6%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A +L + + + N      ++ +L+       R+  A QLFD+M       D   Y +
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G C   +LE A++L SEM   G+  +    + +I    DEG+++  V+ + ED  ++
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR-VVEDMVMH 349

Query: 271 TMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            + L   +  ++M      G +  A N    M K    AD GV               ++
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD-GV---------------TY 393

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +IN L + G+L  A  + +EM   G   +   Y  LIDG C   ++ E++ +  +M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T  ++   LC++ DV  A  L+ +M  +G E  +     LI  LCK G   +
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R + DM + G  PD+  Y+  IG L   K +D A  L +++   G  P +V YN++++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C + RV   + L   M+ K + P+  TYN L+  +C   N+         ML +E   
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV-V 632

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+  TY  LI G C A    +A+   +EM EKG      ++ ALI  L K  +   A   
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 628 FRMMKEKGM--KPDMFVF 643
           F  M+++ +  +PD++ F
Sbjct: 693 FEKMRKERLTAEPDVYNF 710



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           +L + +  +SP+  S + ++  L     LD A+ LF+E+ +    +N   YN L+  LC 
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPE----KNTCSYNILLKALCT 265

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + R++++++L  EM      P   T   M    C   ++  A+ L+ +M  +G E     
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T +I  LC  G+  +A R + DMV  G + D   ++  + G      +  A   F ++ 
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G   D V Y  +I+GLC+A  + EAE +  EM  KGL     TY +LI+G+CK G + 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L  ++M++K   +P+V+TYT L DGLC  G    A  L +EM  KG   N  T+ +L
Sbjct: 443 EAFLVHNKMVQKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GLCK      A+     M E G+KPD++ +  +I A         A  +L+EM
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 215/472 (45%), Gaps = 37/472 (7%)

Query: 197 TKSGFASDAAMYDVIIGGLC-KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           T   F+SD   +D+++  LC  +  L + L+ Y      GI+P  E  + ++     + E
Sbjct: 190 TYKAFSSDPVSFDLLL--LCLPSAPLLLRLRQY------GISPSPESCNAVLCRLPLD-E 240

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              L +E+ E    NT +   N +++ L + G I  A+ L   M                
Sbjct: 241 AVQLFQELPEK---NTCSY--NILLKALCTAGRIKDAHQLFDEMAS-------------- 281

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  ++ I+++      +L+ A+ L  EM   G   N   Y ++I  LC+  ++
Sbjct: 282 -----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++  ++ +M   G         ++    CR+ D+  A N   +M+ +G        T L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LC+ G+  EA R L +M  +G   D V Y+  I G   + ++  A  +   +     
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +  GLCK   V  A +L +EM +KGL  ++ TYN LING CK+GN++QAM 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            +  M   E+G  PDV TYTT+I  LC +   D A  L  EM +KG  P  +T+  L+ G
Sbjct: 517 TMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            C   R          M EK + P+   + +L+  +  E N     E+ K M
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 224/509 (44%), Gaps = 27/509 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   L++ L + G +++A+ LFD++       P+  +Y  ++   C    ++     L E
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   +    T ++ + C+ GQ   A+ V  +++ HG V D  VF+ ++  F + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +  A    + M    +  +  T+  LI+G  +   + +A ++  +M   G   DA  Y V
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWED 266
           +I G CK  ++  A  ++++M    +TP+    + L      +G++     LL +   + 
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            ++N  T   NS++  L   G+++QA   ++ MI  +             +  + P+  +
Sbjct: 491 LELNIFTY--NSLINGLCKAGNLEQA---MRTMIDMD-------------EAGLKPDVYT 532

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  II  L +  +LD A SL +EM   G    +  YN L++G C S R+E    LL  M 
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E    P   T NS+ +  C  +++     + + M  Q   P      +LIK  CK     
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA  F ++M+++GF      Y+A I  L   K+   A  LF  +       +   YN  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
                   +     L +E++   L+ S+A
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLVKSIA 741


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 25/418 (5%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSD----EGELTLLVKEIWE 265
           II  LC++ +   ALQL+ +M    G +PD   LS L++SC+     +   TLL K    
Sbjct: 150 IIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKA--S 207

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           +          N +M  L+  G +     L +  I+                   SP+  
Sbjct: 208 EFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDR---------------VYSPDVW 252

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           SF+++I  + + G++  AL L   M + GC  +   +N L+DGLC +N +   +E+LR +
Sbjct: 253 SFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRL 312

Query: 386 EESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           +  G   P   T  S+    C+   +  A+ +   M   G  P      +LI    K G 
Sbjct: 313 QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD 372

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
              A      M +    PD+V +S+ I G     ++D AL ++ D+  H   P+V  ++I
Sbjct: 373 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 432

Query: 505 IISGLCKAQRVAEAEDLFNEM-ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           II  LCK  R  EA  L NE+ +   + P    YN +I+  CK G +D+A L + + +E+
Sbjct: 433 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANL-IRKGMEE 491

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +   PD  TYT LI G C+  R  +AIM ++EM E GC+P+ IT    I+ L K   P
Sbjct: 492 KGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 549



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 2/333 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLRE 384
           +++ ++++L+  G++   ++LF    Q      +V+ +N +I G+C   +++++ EL+  
Sbjct: 217 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 276

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHG 443
           M E G  P   T N +   LCR  +V     ++R+++  G   P V   T +I   CK G
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +A     DMV  G +P+ V Y+  I G   +  +  A+E+++ +    C PDVV ++
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I G C+  ++ +A  ++++M    + P+V T++++I+  CK    D+A+  L+ +  +
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +P    Y  +ID LC  G+ D+A ++   MEEKGC P++ T+  LI G C   R   
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 516

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           A++ F  M E G  PD       IS  L    P
Sbjct: 517 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 549



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 11/327 (3%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           +++P+  S   II  L + G+   AL LF +M T  G   +    + L+     +N L+ 
Sbjct: 139 SITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDA 198

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTL 434
           S  LL +  E G +   +  N +   L  R    DVV       + RV   + W     +
Sbjct: 199 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVW--SFNV 256

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +IK +C+ G+  +A   +  M + G  PD V ++  + GL     V    E+ R +   G
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316

Query: 495 CC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C P+VV +  +ISG CKA ++ +A  ++N+M+  G++P+  TYN+LING+ K G++  A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +    +M       PDV+T+++LIDG C  G+ DDA+ +W++M +    PN  TF  +I 
Sbjct: 377 VEVYQQMTRLRC-PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIH 435

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDM 640
            LCK +R   A+    ++ E  ++PD+
Sbjct: 436 SLCKQNRSDEAI---GLLNELNLRPDI 459



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 191/413 (46%), Gaps = 23/413 (5%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDH-GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
           ++ V C SG+   AL +F+++  H G+  D    S L+ + +    +D +  L+ +  + 
Sbjct: 150 IIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEF 209

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQLEM 223
             R+    +  L+   + + RV   + LF++  +   ++ D   ++V+I G+C+  Q++ 
Sbjct: 210 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 269

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIM 280
           AL+L   M   G +PD    + L+       E++    +++ +  D       +   S++
Sbjct: 270 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 329

Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
                 G ++ A  +   M+                   + PNT +++++IN   K G L
Sbjct: 330 SGYCKAGKLEDAMAVYNDMVAS----------------GIMPNTVTYNVLINGYGKVGDL 373

Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             A+ ++++MT++ C  +V  +++LIDG C   +L+++  +  +M +   +P  +T + +
Sbjct: 374 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 433

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
              LC++     A+ L+ ++ ++    P       +I  LCK GK  EA      M ++G
Sbjct: 434 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 493

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
             PD   Y+  I G     R+  A+  F ++   GC PD +  N  IS L KA
Sbjct: 494 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 546



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 161/363 (44%), Gaps = 21/363 (5%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C +   A   L+  L   G V +   LF++  ++ +  P+ +S+N +++ +C+   V   
Sbjct: 211 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKA 270

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
              ++ M ++G   D  T   L+   C + +  +   V   +   G    +V  F+ ++ 
Sbjct: 271 LELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 330

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            + K G+++ A  +   M    I  N  T+ VLI+G+ K   +  A++++ +MT+     
Sbjct: 331 GYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 390

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLV 260
           D   +  +I G C+  QL+ AL+++S+M    I P+    S +I S   +    E   L+
Sbjct: 391 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLL 450

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            E+    D+     + N ++ +L   G +D+A NL++   KG           M  KG  
Sbjct: 451 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA-NLIR---KG-----------MEEKG-C 494

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  ++ I+I       ++  A+  F EM + GC  +    N  I  L  +    E   
Sbjct: 495 RPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDH 554

Query: 381 LLR 383
           ++R
Sbjct: 555 VMR 557



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 2/170 (1%)

Query: 483 ALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           AL+LF  +  H G  PD    + ++S    A  +  +  L ++    G       YN L+
Sbjct: 163 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 222

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +     G +   +    R ++    SPDV ++  +I G+C  G+   A+ L   M E GC
Sbjct: 223 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 282

Query: 602 APNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +P+ +T   L+ GLC+ +   R   V  R+ ++    P++  F ++IS +
Sbjct: 283 SPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGY 332


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 207/427 (48%), Gaps = 50/427 (11%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N+++ +++  G  D A      +I     +++             PN  SF+++I  L +
Sbjct: 140 NTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI------------QPNGLSFNLVIKALCR 187

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +D A+ +FR M+   C+ + + Y+ L+ GLCN  R++E+  LL EM+  G  P    
Sbjct: 188 VGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVA 247

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTL--------------------- 434
            N +   LC++ D+  A  LV  M ++G  P  V +N+L                     
Sbjct: 248 FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV 307

Query: 435 -------------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
                        L+    KHG+A++  R L  + ++G+  +   YS+ I GL    + +
Sbjct: 308 ANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGE 367

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
             ++L++++   GC P+ + Y+ +I GLC+  +  EA++   EM  KG  P+  TY+ L+
Sbjct: 368 HGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 427

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
            G+ ++G+I +A+L    M + +    +V  Y+ LI+GLC  G+  +A+++W +M  +G 
Sbjct: 428 WGYFEAGDIHKAILVWKEMTDNDCNHHEV-CYSILINGLCKNGKLKEALIVWKQMLSRGI 486

Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMM--KEKGMKPDMFVFVALISAFLSELNPPLA 659
             + + + ++I G C        +  F  M      ++PD+  +  L++AF ++ +   A
Sbjct: 487 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRA 546

Query: 660 FEVLKEM 666
            ++L  M
Sbjct: 547 IDILNTM 553



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 246/547 (44%), Gaps = 56/547 (10%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           S+  L+E    S     +E  L +M+     + + +   + + Y  +    KAL +F+ +
Sbjct: 67  SFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRM 126

Query: 128 IDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCN----IRLNEKTFCVLIHGFV 181
                  + V  F+ +L    + G  D A E    + D N    I+ N  +F ++I    
Sbjct: 127 GAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALC 186

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           +   VD+A+++F  M+     +D   Y  ++ GLC   +++ A+ L  EM+  G  P+  
Sbjct: 187 RVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 246

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
             + LI++                                 L   G + +A  L+  M  
Sbjct: 247 AFNVLISA---------------------------------LCKKGDLSRASKLVDNMF- 272

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
                          KG V PN  +++ +++ L   GKLD A+SL   M    C+ N   
Sbjct: 273 --------------LKGCV-PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDIT 317

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           +  L+DG     R  +   +L  +EE G++   F+ +S+   L +       + L ++M 
Sbjct: 318 FGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMV 377

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +G +P     + LI  LC+ GK  EA  +L +M  +G  P+   YS+ + G  +   + 
Sbjct: 378 EKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIH 437

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+ +++++  + C    V Y+I+I+GLCK  ++ EA  ++ +M+++G+   V  Y+ +I
Sbjct: 438 KAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMI 497

Query: 542 NGWCKSGNIDQAMLCLSRML-EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G+C +  ++Q M   ++ML       PDV+TY  L++  C       AI + N M ++G
Sbjct: 498 HGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQG 557

Query: 601 CAPNRIT 607
           C P+ IT
Sbjct: 558 CDPDFIT 564



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 234/542 (43%), Gaps = 73/542 (13%)

Query: 15  RVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
           ++L Q   ++R F+    +  + +  G   L ++A  LF ++  E  C     S+N +L 
Sbjct: 86  QLLHQMKCENRVFIEKSFI-IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLN 144

Query: 75  ALCKSCSVDLV---------EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
            + +    DL                +Q  G  ++      +++  C  G  D+A+ VF 
Sbjct: 145 VVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNL-----VIKALCRVGNVDQAVEVFR 199

Query: 126 EIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
            + D   V D + +S L+      G +D+A  L++ M       N   F VLI    KK 
Sbjct: 200 GMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKG 259

Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
            + +A +L D M   G   +   Y+ ++ GLC   +L+ A+ L + M  +   P+     
Sbjct: 260 DLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFG 319

Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
            L+      G            R ++         +R+LVS                   
Sbjct: 320 TLVDGFVKHG------------RALDG--------VRVLVS------------------- 340

Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
           + + G      ++G    N  S+  +I+ L K+GK +  + L++EM + GC  N  +Y+ 
Sbjct: 341 LEEKG------YRG----NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSA 390

Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR--- 421
           LIDGLC   + +E+ E L EM+  G  P  FT +S+        D+  A+ + ++M    
Sbjct: 391 LIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDND 450

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
              HE      ++LI  LCK+GK  EA      M+  G   D+V YS+ I G  + + V+
Sbjct: 451 CNHHEVCY---SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 507

Query: 482 LALELFRDICAHG--CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
             ++LF  +  H     PDVV YNI+++  C    V+ A D+ N M+ +G  P   T ++
Sbjct: 508 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDI 567

Query: 540 LI 541
            +
Sbjct: 568 FL 569



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 40/364 (10%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV----FLYNNLIDGLCNSNRLEESYEL 381
           SF+ ++N ++++G  DLAL  +  +       N+      +N +I  LC    ++++ E+
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEV 197

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            R M +       +T +++   LC    +  A++L+ +M+V+G  P      +LI  LCK
Sbjct: 198 FRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK 257

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A + + +M  +G +P+ V Y++ + GL    ++D A+ L   + A+ C P+ + 
Sbjct: 258 KGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDIT 317

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +  ++ G  K  R  +   +   +  KG   +  +Y+ LI+G  K G  +  M     M+
Sbjct: 318 FGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMV 377

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDD--------------------------------- 588
           EK    P+ I Y+ LIDGLC  G+PD+                                 
Sbjct: 378 EK-GCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 589 --AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
             AI++W EM +  C  + + +  LI GLCK  + + AL+ ++ M  +G+K D+  + ++
Sbjct: 437 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 496

Query: 647 ISAF 650
           I  F
Sbjct: 497 IHGF 500


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 157/307 (51%), Gaps = 1/307 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A++ F  M  +      F ++N++  L  +        L ++ + +G  P   TLN +  
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           C C    +  A ++   +  +G+ P       LIK LC  G+   A  F   +V +GF  
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V Y   I GL           L R +  H   PDVV Y  II  LCK +RV +A DL+
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +EMI KG+ P+V TYN LI G+C  GN+ +A   L+ M  K   +PDV T+  LID L  
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNI-NPDVYTFNILIDALGK 315

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ D+AI L+ EM+ K   PN +T+ +LI GLCK      A+   + MKE+G++PD++ 
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 375

Query: 643 FVALISA 649
           +  L+ A
Sbjct: 376 YTILLDA 382



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 166/329 (50%), Gaps = 3/329 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P T  FD I+++L+K+      +SLF++    G   N+   N LI+  C+   +  ++ +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELC 440
              + + G+ P   TLN++ + LC   ++  AL    K+  QG +   V + TL I  LC
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTL-INGLC 209

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+     R L  +      PD+V Y+  I  L   KRV  A +L+ ++   G  P+V 
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            YN +I G C    + EA  L NEM  K + P V T+N+LI+   K G ID+A+     M
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             K    P+++TYT+LIDGLC     + AI L  +M+E+G  P+  ++  L+  LCK  R
Sbjct: 330 KHKNM-FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 388

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISA 649
              A   F+ +  KG   ++  +  +I+ 
Sbjct: 389 LENAKQFFQHLLVKGYHLNVRTYNVMING 417



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 180/375 (48%), Gaps = 5/375 (1%)

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           N+L +++K +    V + +   F+   V+PN  + +I+IN       +  A S+F  + +
Sbjct: 98  NILSSLVKNKHYLTV-ISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILK 156

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G   +    N LI GLC    ++ +     ++   GF+    +  ++   LC+  +   
Sbjct: 157 RGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 216

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
              L+RK+     +P V   T +I  LCK+ +  +A    ++M+ +G  P++  Y+  I 
Sbjct: 217 VARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIY 276

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
           G   +  +  A  L  ++      PDV  +NI+I  L K  ++ EA  LF EM  K + P
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFP 336

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIM 591
           ++ TY  LI+G CK+ ++++A+    +M  KE G  PDV +YT L+D LC  GR ++A  
Sbjct: 337 NIVTYTSLIDGLCKNHHLERAIALCKKM--KEQGIQPDVYSYTILLDALCKGGRLENAKQ 394

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            +  +  KG   N  T+  +I GLCK       +     M+ KG  PD   F  +I A  
Sbjct: 395 FFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALF 454

Query: 652 SELNPPLAFEVLKEM 666
            +     A + L+EM
Sbjct: 455 EKDENDKAEKFLREM 469



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 187/414 (45%), Gaps = 19/414 (4%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+  F++M           +D I+  L KNK     + L+ + + +G+TP+   L+ LI 
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 249 SCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
                  +T           R  +   +  N++++ L   G I +A      +   + + 
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRA------LYFHDKVV 190

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
             G ++  +  GT          +IN L K G+      L R++       +V +Y  +I
Sbjct: 191 AQGFQLDQVSYGT----------LINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTII 240

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             LC + R+ ++ +L  EM   G  P  FT N++    C   ++  A +L+ +M+++   
Sbjct: 241 HCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNIN 300

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P V    +LI  L K GK  EA     +M  +   P+IV Y++ I GL     ++ A+ L
Sbjct: 301 PDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIAL 360

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
            + +   G  PDV +Y I++  LCK  R+  A+  F  ++ KG   +V TYN++ING CK
Sbjct: 361 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK 420

Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G     M   S+M E +   PD IT+ T+I  L      D A     EM  +G
Sbjct: 421 AGLFGDVMDLKSKM-EGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 182/468 (38%), Gaps = 83/468 (17%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + ++ +L +L K+     V    K+ Q  G   +  TL  L+  +C+      A SV
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           F  I+  G+  + +                                  T   LI G    
Sbjct: 151 FANILKRGYHPDAI----------------------------------TLNTLIKGLCFC 176

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +AL   DK+   GF  D   Y  +I GLCK  + +   +L  +++G  + PD    
Sbjct: 177 GEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPD---- 232

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                         ++  +I+  L  N  +  A +L   MI   
Sbjct: 233 -----------------------------VVMYTTIIHCLCKNKRVGDACDLYSEMI--- 260

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        KG +SPN  +++ +I      G L  A SL  EM       +V+ +N
Sbjct: 261 ------------VKG-ISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFN 307

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LID L    +++E+  L  EM+     P   T  S+   LC+   +  A+ L +KM+ Q
Sbjct: 308 ILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P V   T+L+  LCK G+   A +F   ++ +G+  ++  Y+  I GL         
Sbjct: 368 GIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV 427

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           ++L   +   GC PD + +  II  L +     +AE    EMI +GL+
Sbjct: 428 MDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 1/254 (0%)

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           A+    +M +    P   H   ++  L K+   +            G  P++   +  I 
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
               +  +  A  +F +I   G  PD +  N +I GLC    +  A    ++++ +G   
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
              +Y  LING CK+G   +A+  L R LE  S  PDV+ YTT+I  LC   R  DA  L
Sbjct: 197 DQVSYGTLINGLCKAGET-KAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255

Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
           ++EM  KG +PN  T+  LI G C     + A      MK K + PD++ F  LI A   
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315

Query: 653 ELNPPLAFEVLKEM 666
           E     A  + +EM
Sbjct: 316 EGKIDEAISLFEEM 329



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 55/361 (15%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            L  LI+ L   G ++ A    D+V  +G  + +  SY  L+  LCK+     V   L++
Sbjct: 165 TLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL-DQVSYGTLINGLCKAGETKAVARLLRK 223

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWG 149
           ++ +    D    T ++   C + +   A  +++E+I  G +  +VF+   L+  F   G
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKG-ISPNVFTYNTLIYGFCIMG 282

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            + +A  L+  M   NI  +  TF +LI    K+ ++D+A+ LF++M       +   Y 
Sbjct: 283 NLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYT 342

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCKN  LE A+ L  +MK  GI P                             DV
Sbjct: 343 SLIDGLCKNHHLERAIALCKKMKEQGIQP-----------------------------DV 373

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQA-MIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
            + T+L ++    L   G ++ A    Q  ++KG  +                 N  +++
Sbjct: 374 YSYTILLDA----LCKGGRLENAKQFFQHLLVKGYHL-----------------NVRTYN 412

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
           ++IN L K G     + L  +M   GCM +   +  +I  L   +  +++ + LREM   
Sbjct: 413 VMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIAR 472

Query: 389 G 389
           G
Sbjct: 473 G 473


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 244/549 (44%), Gaps = 20/549 (3%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  Y   G    A   F  +   G     HV++ L+ A++   ++++A   + +M +  
Sbjct: 295 MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 354

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I ++  T+ +L+ GF K +  + A   F +  +     +A +Y  II   C+   +  A 
Sbjct: 355 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 414

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            L  EM+  GI    +I   ++   +  G  E  L+V +  ++       +    ++ + 
Sbjct: 415 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 474

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           +  G + +A               + V  +M   G +  N  ++ ++IN  ++      A
Sbjct: 475 IKIGKVSKA---------------LEVSKMMEVAG-IKHNMKTYSMLINGFVRLKDWANA 518

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++F ++ + G   +V LYNN+I   C    ++ +   ++EM++   +PT  T   +   
Sbjct: 519 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 578

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             R  D+  AL +   MR  G  P V     LI  L +  +  +A   L +M   G  P+
Sbjct: 579 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 638

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              Y+  + G   +     A E F  +   G   DV  Y  ++   CK+ R+  A  +  
Sbjct: 639 EHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR 698

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM ++ +  +   YN+LI+GW + G++ +A   + +M ++E   PD+ TYT+ I+  C A
Sbjct: 699 EMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM-KQEGVQPDIHTYTSFINACCKA 757

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G    A     EME  G  PN  T+  LI G  +   P  AL  F+ MK  G+KPD  V+
Sbjct: 758 GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVY 817

Query: 644 VALISAFLS 652
             L+++ LS
Sbjct: 818 HCLMTSLLS 826



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 212/496 (42%), Gaps = 26/496 (5%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      L+     +   E A+  F + K     + N   Y  ++ A C++C++   E 
Sbjct: 357 MSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTL-NAIIYGNIIYAHCQACNMTQAEA 415

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y   G  +K L VF+ + + G+    + +  L+  + 
Sbjct: 416 LVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYI 475

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+V KA E+ + M+   I+ N KT+ +LI+GFV+      A  +F+ + K G   D  
Sbjct: 476 KIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVV 535

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--- 263
           +Y+ II   C    ++ A++   EM+     P       +I   +  G++   ++     
Sbjct: 536 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 595

Query: 264 -WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVS 321
            W        T   N+++  LV    +++A  +L  M + G                 +S
Sbjct: 596 RWSGCIPTVHTF--NALILGLVEKCQMEKAVEILDEMSLAG-----------------IS 636

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++  I++     G    A   F ++   G   +V+ Y  L+   C S R++ +  +
Sbjct: 637 PNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAV 696

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            REM         F  N +     RR DV  A  L+++M+ +G +P +   T  I   CK
Sbjct: 697 TREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCK 756

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A + + +M   G  P+I  Y+  I G       + AL+ F+++ + G  PD   
Sbjct: 757 AGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAV 816

Query: 502 YNIIISGLCKAQRVAE 517
           Y+ +++ L     VAE
Sbjct: 817 YHCLMTSLLSRASVAE 832



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 156/362 (43%), Gaps = 15/362 (4%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ++  F+    P+   F +++    + G +  A   F  M   G      +Y +LI     
Sbjct: 277 VVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAV 336

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +EE+   +R+M+E G + +  T + +     +  D   A +  ++ +        +H
Sbjct: 337 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAK-------ERH 389

Query: 432 NTL-------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            TL       +I   C+     +A   + +M +EG    I  Y   + G   I   +  L
Sbjct: 390 TTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCL 449

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +F  +   G  P V++Y  +I+   K  +V++A ++   M   G+  ++ TY++LING+
Sbjct: 450 IVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 509

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
            +  +   A      ++ K+   PDV+ Y  +I   C  G  D AI    EM+++   P 
Sbjct: 510 VRLKDWANAFAVFEDVV-KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 568

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             TFM +I G  +    R AL  F MM+  G  P +  F ALI   + +     A E+L 
Sbjct: 569 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 628

Query: 665 EM 666
           EM
Sbjct: 629 EM 630



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 155/348 (44%), Gaps = 30/348 (8%)

Query: 41  GSVGLVEEANM--LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           G V L + AN   +F+ V ++GL  P+   YN ++ A C   ++D     +KEMQ     
Sbjct: 508 GFVRLKDWANAFAVFEDVVKDGL-KPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHR 566

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACEL 157
               T  P++  +  SG   +AL +F+ +   G +   H F+ L++   +  +++KA E+
Sbjct: 567 PTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEI 626

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++ M    I  NE T+  ++HG+       KA + F K+   G   D   Y+ ++   CK
Sbjct: 627 LDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCK 686

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNT 271
           + +++ AL +  EM    I  +  + + LI   +  G      EL   +K+     D++T
Sbjct: 687 SGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHT 746

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            T   N+  +     G + +A   +Q M        VGV+          PN  ++  +I
Sbjct: 747 YTSFINACCKA----GDMQRATKTIQEM------EVVGVK----------PNIKTYTTLI 786

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +   +    + AL  F+EM   G   +  +Y+ L+  L +   + E Y
Sbjct: 787 HGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 834



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 3/291 (1%)

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+++ + +  E   KP+      M     RR D+  A      MR +G EP     T LI
Sbjct: 272 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 331

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
                     EA   +  M +EG    +V YS  +GG   I   + A   F++       
Sbjct: 332 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 391

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            + + Y  II   C+A  + +AE L  EM  +G+   +  Y+ +++G+   GN ++ ++ 
Sbjct: 392 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 451

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             R+  KE G +P VI+Y  LI+     G+   A+ +   ME  G   N  T+  LI G 
Sbjct: 452 FDRL--KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 509

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +      A   F  + + G+KPD+ ++  +I AF    N   A   +KEM
Sbjct: 510 VRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 560


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 234/512 (45%), Gaps = 35/512 (6%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F+ LL   +K     +   L  +M    I  +  T  +L++     +RV + L +   + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           + G+  D   Y  +I GLC   ++  A  L++ M+  G TP+      L+      G ++
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 258 LLVK---EIWEDR-----DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADV 308
           + +K   E+  D      +   + +  + I+  L  +   D+A +L + M ++G      
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG------ 272

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                      ++P   S+  ++         + A  LF EM   G   NV  +N LID 
Sbjct: 273 -----------MTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDV 313

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC   ++ E+ +LL  M + G  P   T NS+    C   D+  A  L   M  +G EP 
Sbjct: 314 LCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPD 373

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V   T+LI   CK  K  EA +    M+Q G  PD+  Y A + GL    +V  A +LF 
Sbjct: 374 VICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFG 433

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +  +G   D+  Y I ++GLCK   + EA +LFN++ +  +   +  +N LI+G CK+G
Sbjct: 434 VMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG 493

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            ++ A     + L +E   PDV+TY  +I   C  G+   A +L+ +ME+ GC P++IT+
Sbjct: 494 KLETAWELFEK-LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 552

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
             LI G  +  +    +    MM ++ +  D+
Sbjct: 553 ATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 225/509 (44%), Gaps = 29/509 (5%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P   S+  LL  L K      V     +M+  G   D  TL  LL   CN  +  + L+
Sbjct: 93  TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           V   I+  G++ + V ++ L+        + KA  L  RM       N  T+  L+ G  
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212

Query: 182 KKSRVDKALQLFDKMTKSG------FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           +   +  AL+L  +M          F      Y +II  LCK+++ + A  L+ EMK  G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
           +TP   ++S   TS   E    L  + + +    N +T   N ++ +L   G + +A +L
Sbjct: 273 MTPT--VIS--YTSLMWEEAKRLFNEMVNQGVQPNVVTF--NVLIDVLCKEGKVIEAKDL 326

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L+ MI+               +G V PN  +++ +I      G L+ A  LF  M   GC
Sbjct: 327 LEVMIQ---------------RGIV-PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             +V  Y  LI+G C ++++EE+ +L   M + G +P   T  ++   L +   V  A  
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           L   M+V G    +    + +  LCK+G   EA      +       DI C++  I GL 
Sbjct: 431 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 490

Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
              +++ A ELF  +      PDVV YNI+I   C+  +V +A  LF +M   G  P   
Sbjct: 491 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKI 550

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           TY  LI G+ +S  +++ +  L  M++++
Sbjct: 551 TYATLIRGFFESKKLEKVVELLHMMVQRD 579



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 174/330 (52%), Gaps = 15/330 (4%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP+  + +I++N L    ++   L++   + + G + ++  Y  LI GLC  +R+ ++ 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH------EPWVKHNT 433
            L   M++ G  P   T  ++ + LCR  ++  AL L ++M           +P V   +
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
           ++I  LCK  +  EA     +M  +G  P ++ Y++ +         + A  LF ++   
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQ 298

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  P+VV +N++I  LCK  +V EA+DL   MI +G++P++ TYN LI G+C  G+++ A
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 358

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
                 M  K    PDVI YT LI+G C   + ++A+ L+N M + G  P+  T+ AL+T
Sbjct: 359 RELFVSMPSK-GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 417

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           GL +  +   A   F +MK  G+  D++++
Sbjct: 418 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 15/337 (4%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P  SSF  +++ L K         L+ +M   G   +    N L++ LCN NR+ E   
Sbjct: 93  TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           ++  +   G+ P   T  ++ + LC    +  A  L  +M+  G  P       L+K LC
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212

Query: 441 KHGKAMEAFRFLTDMVQEG------FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           + G    A +   +M+ +       F P ++ YS  I  L   +R D A +LF ++   G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             P V++Y  ++          EA+ LFNEM+ +G+ P+V T+N+LI+  CK G + +A 
Sbjct: 273 MTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 324

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L  M+++    P+++TY +LI+G C+ G  + A  L+  M  KGC P+ I +  LI G
Sbjct: 325 DLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLING 383

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
            CK  +   A+  +  M + G +PD+  + AL++   
Sbjct: 384 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 420



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 185/455 (40%), Gaps = 88/455 (19%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD----YGWGYDK 101
           + +A +LF ++++ G C PN  +Y  L++ LC++ ++ +     +EM +    YG  +  
Sbjct: 182 ISKAALLFTRMQKLG-CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKP 240

Query: 102 YT------------------------------LTPLLQVYCNSGQFDKALSVFNEIIDHG 131
                                           +TP +  Y  S  +++A  +FNE+++ G
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY-TSLMWEEAKRLFNEMVNQG 299

Query: 132 WVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKAL 190
                V F++L+    K G+V +A +L+E M    I  N  T+  LI GF     ++ A 
Sbjct: 300 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAR 359

Query: 191 QLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC 250
           +LF  M   G   D   Y V+I G CK  ++E A++LY+ M   G  PD +    L+T  
Sbjct: 360 ELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG- 418

Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVG 309
                                           L   G +  A  L   M + G P  D+ 
Sbjct: 419 --------------------------------LFQGGKVGDAKKLFGVMKVYGIP-GDLY 445

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
           +                + I +N L K+G L  A+ LF ++       ++  +N LIDGL
Sbjct: 446 I----------------YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 489

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C + +LE ++EL  ++ +   +P   T N M    CR   VV A  L +KM   G  P  
Sbjct: 490 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 549

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
                LI+   +  K  +    L  MVQ     D+
Sbjct: 550 ITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 120/286 (41%), Gaps = 34/286 (11%)

Query: 399 SMFRCLCRRQDV--VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           SMF   C+  ++  + A      M      P +   T L+  L K     + F     M 
Sbjct: 64  SMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  PD    +  +  L ++ RV   L +   I   G  PD+V Y  +I GLC   R++
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES-----GSPDVI 571
           +A  LF  M   G  P+  TY  L+ G C++GNI  A+     ML   S       P VI
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 572 TYTTLIDGLCIAGRPDDA--------------------IMLW-------NEMEEKGCAPN 604
           +Y+ +ID LC   R D+A                     ++W       NEM  +G  PN
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPN 303

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
            +TF  LI  LCK  +   A     +M ++G+ P++  + +LI  F
Sbjct: 304 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 349



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 201/471 (42%), Gaps = 44/471 (9%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            L  L+ CL +V  V E   +   + R G  +P+  +Y  L++ LC    +    +    
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGY-IPDIVTYTTLIKGLCMEHRISKAALLFTR 191

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID----HGWVDEHV---FSILLVA 144
           MQ  G   +  T   L++  C +G    AL +  E+++    +G   + V   +SI++ A
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
             K    D+A +L E M    +     ++  L+         ++A +LF++M   G   +
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPN 303

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              ++V+I  LCK  ++  A  L   M   GI P+    + LI      G+L    +E++
Sbjct: 304 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN-SARELF 362

Query: 265 E-------DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                   + DV   T+L N   +       +++A  L   M++      VG        
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCK----TSKVEEAMKLYNGMLQ------VGKR------ 406

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  ++  ++  L + GK+  A  LF  M   G   ++++Y   ++GLC +  L E
Sbjct: 407 ----PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 462

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           + EL  +++    K      N +   LC+   +  A  L  K+  +  +P V    ++I 
Sbjct: 463 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 522

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           E C+ G+ ++A      M + G  PD + Y+  I G  + K+++  +EL  
Sbjct: 523 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 4/231 (1%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           VG +  A  LF  +  +G C P+   Y  L+   CK+  V+        M   G   D  
Sbjct: 352 VGDLNSARELFVSMPSKG-CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T   LL      G+   A  +F  +  +G   D +++ I L    K G + +A EL  ++
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 470

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
              NI+L+ + F  LI G  K  +++ A +LF+K+ +     D   Y+++I   C+  Q+
Sbjct: 471 KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 530

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK--EIWEDRDVN 270
             A  L+ +M+ +G TPD    + LI    +  +L  +V+   +   RDV+
Sbjct: 531 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 2/199 (1%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           VEEA  L++ + + G   P+  +Y  LL  L +   V   +     M+ YG   D Y   
Sbjct: 390 VEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 448

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
             L   C +G   +A+ +FN++  +   +D   F+ L+    K G+++ A EL E++   
Sbjct: 449 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 508

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            ++ +  T+ ++IH F +  +V KA  LF KM K+G   D   Y  +I G  ++K+LE  
Sbjct: 509 ELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKV 568

Query: 225 LQLYSEMKGSGITPDFEIL 243
           ++L   M    ++ D  IL
Sbjct: 569 VELLHMMVQRDVSLDVNIL 587



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 545 CKSGNID--QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
           CK+GNI   QA      M+     +P + ++T L+ GL           L+N+M   G +
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNP-TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           P+  T   L+  LC  +R    L     +  +G  PD+  +  LI     E
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCME 179


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 244/549 (44%), Gaps = 20/549 (3%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           ++  Y   G    A   F  +   G     HV++ L+ A++   ++++A   + +M +  
Sbjct: 274 MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 333

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I ++  T+ +L+ GF K +  + A   F +  +     +A +Y  II   C+   +  A 
Sbjct: 334 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 393

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
            L  EM+  GI    +I   ++   +  G  E  L+V +  ++       +    ++ + 
Sbjct: 394 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 453

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           +  G + +A               + V  +M   G +  N  ++ ++IN  ++      A
Sbjct: 454 IKIGKVSKA---------------LEVSKMMEVAG-IKHNMKTYSMLINGFVRLKDWANA 497

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
            ++F ++ + G   +V LYNN+I   C    ++ +   ++EM++   +PT  T   +   
Sbjct: 498 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 557

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
             R  D+  AL +   MR  G  P V     LI  L +  +  +A   L +M   G  P+
Sbjct: 558 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 617

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
              Y+  + G   +     A E F  +   G   DV  Y  ++   CK+ R+  A  +  
Sbjct: 618 EHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR 677

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
           EM ++ +  +   YN+LI+GW + G++ +A   + +M ++E   PD+ TYT+ I+  C A
Sbjct: 678 EMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM-KQEGVQPDIHTYTSFINACCKA 736

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G    A     EME  G  PN  T+  LI G  +   P  AL  F+ MK  G+KPD  V+
Sbjct: 737 GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVY 796

Query: 644 VALISAFLS 652
             L+++ LS
Sbjct: 797 HCLMTSLLS 805



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 212/496 (42%), Gaps = 26/496 (5%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      L+     +   E A+  F + K     + N   Y  ++ A C++C++   E 
Sbjct: 336 MSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTL-NAIIYGNIIYAHCQACNMTQAEA 394

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y   G  +K L VF+ + + G+    + +  L+  + 
Sbjct: 395 LVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYI 454

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+V KA E+ + M+   I+ N KT+ +LI+GFV+      A  +F+ + K G   D  
Sbjct: 455 KIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVV 514

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--- 263
           +Y+ II   C    ++ A++   EM+     P       +I   +  G++   ++     
Sbjct: 515 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 574

Query: 264 -WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVS 321
            W        T   N+++  LV    +++A  +L  M + G                 +S
Sbjct: 575 RWSGCIPTVHTF--NALILGLVEKCQMEKAVEILDEMSLAG-----------------IS 615

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  ++  I++     G    A   F ++   G   +V+ Y  L+   C S R++ +  +
Sbjct: 616 PNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAV 675

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            REM         F  N +     RR DV  A  L+++M+ +G +P +   T  I   CK
Sbjct: 676 TREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCK 735

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G    A + + +M   G  P+I  Y+  I G       + AL+ F+++ + G  PD   
Sbjct: 736 AGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAV 795

Query: 502 YNIIISGLCKAQRVAE 517
           Y+ +++ L     VAE
Sbjct: 796 YHCLMTSLLSRASVAE 811



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 156/362 (43%), Gaps = 15/362 (4%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           ++  F+    P+   F +++    + G +  A   F  M   G      +Y +LI     
Sbjct: 256 VVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAV 315

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
              +EE+   +R+M+E G + +  T + +     +  D   A +  ++ +        +H
Sbjct: 316 GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAK-------ERH 368

Query: 432 NTL-------LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLAL 484
            TL       +I   C+     +A   + +M +EG    I  Y   + G   I   +  L
Sbjct: 369 TTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCL 428

Query: 485 ELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
            +F  +   G  P V++Y  +I+   K  +V++A ++   M   G+  ++ TY++LING+
Sbjct: 429 IVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 488

Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
            +  +   A      ++ K+   PDV+ Y  +I   C  G  D AI    EM+++   P 
Sbjct: 489 VRLKDWANAFAVFEDVV-KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 547

Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
             TFM +I G  +    R AL  F MM+  G  P +  F ALI   + +     A E+L 
Sbjct: 548 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 607

Query: 665 EM 666
           EM
Sbjct: 608 EM 609



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 155/348 (44%), Gaps = 30/348 (8%)

Query: 41  GSVGLVEEANM--LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWG 98
           G V L + AN   +F+ V ++GL  P+   YN ++ A C   ++D     +KEMQ     
Sbjct: 487 GFVRLKDWANAFAVFEDVVKDGL-KPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHR 545

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACEL 157
               T  P++  +  SG   +AL +F+ +   G +   H F+ L++   +  +++KA E+
Sbjct: 546 PTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEI 605

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           ++ M    I  NE T+  ++HG+       KA + F K+   G   D   Y+ ++   CK
Sbjct: 606 LDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCK 665

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWEDRDVNT 271
           + +++ AL +  EM    I  +  + + LI   +  G      EL   +K+     D++T
Sbjct: 666 SGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHT 725

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
            T   N+  +     G + +A   +Q M        VGV+          PN  ++  +I
Sbjct: 726 YTSFINACCKA----GDMQRATKTIQEM------EVVGVK----------PNIKTYTTLI 765

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +   +    + AL  F+EM   G   +  +Y+ L+  L +   + E Y
Sbjct: 766 HGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 813



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 3/291 (1%)

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+++ + +  E   KP+      M     RR D+  A      MR +G EP     T LI
Sbjct: 251 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 310

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
                     EA   +  M +EG    +V YS  +GG   I   + A   F++       
Sbjct: 311 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTT 370

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            + + Y  II   C+A  + +AE L  EM  +G+   +  Y+ +++G+   GN ++ ++ 
Sbjct: 371 LNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIV 430

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             R+  KE G +P VI+Y  LI+     G+   A+ +   ME  G   N  T+  LI G 
Sbjct: 431 FDRL--KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGF 488

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            +      A   F  + + G+KPD+ ++  +I AF    N   A   +KEM
Sbjct: 489 VRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEM 539


>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 227/494 (45%), Gaps = 68/494 (13%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
           FA D  +   ++G L +   + ++ +L +E++G G     E++  L+ S    G L    
Sbjct: 114 FARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLG-LARYA 172

Query: 261 KEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            E++       +   T + N+++   V  G++D AY   Q M      AD          
Sbjct: 173 HEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMP-----AD---------- 217

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  +++ +++ + + G +D A+ L R+M   G   NVF Y  L+DG CN+ R+EE
Sbjct: 218 -GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEE 276

Query: 378 SYELLREMEESGFKPTHFT----LNSMFRCLCRRQDVVGALNLVRKMRVQGHE----PWV 429
           ++ +L +M+E G  P+  T    ++ +FRCL R +    A  ++      GHE    P  
Sbjct: 277 AFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDK----AYRMLSDW--LGHETSLHPSA 330

Query: 430 KHNTL-------LIKELCKHGKAMEAFRFLTD--------------------------MV 456
            H  L       + KE  +  K M A  +L D                           +
Sbjct: 331 CHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFI 390

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
           + G  P    Y   I  L++ K    A      +   G    V++YN++I    KA  V 
Sbjct: 391 KNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVD 450

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
           +AE++  EM  KG +P++ T+N LI+G+ K GN+  A + L +ML +    PD+IT+T+L
Sbjct: 451 KAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVL-KMLMEHGFMPDIITFTSL 509

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           IDGLC   + DDA + + EM E G  PN  T+  L+  LC       A+     MK  G+
Sbjct: 510 IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGV 569

Query: 637 KPDMFVFVALISAF 650
            PD + F ALI +F
Sbjct: 570 TPDAYSFNALILSF 583



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 247/536 (46%), Gaps = 64/536 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+   G +GL   A+ +F Q+ R GL  P+   YN L+ A  ++ +VD   +R ++M   
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGL-RPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF--SILLVAFSKWGEVDK 153
           G   D++T   L+   C  G  D+A+ +  ++   G +  +VF  ++L+  F   G V++
Sbjct: 218 GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEG-IRPNVFTYTMLVDGFCNAGRVEE 276

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHG---------------------------------- 179
           A  ++++M +  +  +E T+  L+HG                                  
Sbjct: 277 AFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLY 336

Query: 180 -FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA--LQLYSEMKGSGI 236
              KK    +A++   +M+  G+  D+  + +++   C  K LE++   +L      +G 
Sbjct: 337 CLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMS--CSLKCLEVSDLCELLDSFIKNGG 394

Query: 237 TPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            P F++   +I S   C +  +    +  +   + + +  +  N ++   V  G++D+A 
Sbjct: 395 NPGFDVYIMVIKSLLNCKNFSKANHYLGHMVL-KGLLSSVMSYNMVIDCFVKAGAVDKAE 453

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +++ M                 KG + PN  +F+ +I+   K G +  A  + + + + 
Sbjct: 454 EIVKEMQD---------------KGFL-PNLVTFNTLISGYSKLGNVHNAKVVLKMLMEH 497

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G M ++  + +LIDGLCN+++L++++    EM E G +P   T N +   LC    V  A
Sbjct: 498 GFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKA 557

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
           ++L+ KM++ G  P       LI   C+  K  +A     DMV+ G +PD   Y++ I  
Sbjct: 558 IDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKA 617

Query: 474 LIDIKRVDLALELFRDICAHGC-CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
           L D +RV+ A E+       GC   +  +Y  I++ L K  + +EA +L ++ +++
Sbjct: 618 LCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDKYLSR 673



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 122/511 (23%), Positives = 220/511 (43%), Gaps = 31/511 (6%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V E +   L+ ++ + G    A E+  +M    +R +   +  LI   V+   VD A   
Sbjct: 151 VSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLR 210

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F +M   G   D   Y+ ++ G+C+   ++ A++L  +M+G GI P+    + L+    +
Sbjct: 211 FQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCN 270

Query: 253 EGELTLL------VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE--- 303
            G +         +KE        T   L + + R L      D+AY +L   +  E   
Sbjct: 271 AGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCL----ERDKAYRMLSDWLGHETSL 326

Query: 304 -PIA-----------DVGVEMLMIFKGTVSP----NTSSFDIIINTLLKDGKLDLALSLF 347
            P A           D+  E +   K   +     ++++F I+++  LK  ++     L 
Sbjct: 327 HPSACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELL 386

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
               + G      +Y  +I  L N     ++   L  M   G   +  + N +  C  + 
Sbjct: 387 DSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKA 446

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
             V  A  +V++M+ +G  P +     LI    K G    A   L  +++ GF+PDI+ +
Sbjct: 447 GAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITF 506

Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
           ++ I GL +  ++D A   F ++   G  P+   YN+++  LC A  V +A DL N+M  
Sbjct: 507 TSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKI 566

Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G+ P   ++N LI  +C+   +D+A    + M+ +    PD  TY +LI  LC   R +
Sbjct: 567 DGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMV-RFGVVPDSYTYNSLIKALCDERRVN 625

Query: 588 DAIMLWNEMEEKGCA-PNRITFMALITGLCK 617
            A  +    E  GC+  N  ++  ++  L K
Sbjct: 626 KAKEILFARERSGCSTSNNQSYWPIVAALAK 656



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 159/367 (43%), Gaps = 39/367 (10%)

Query: 338 GKLDLAL---SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           G+L LA     +F +M ++G   +  +YN LI     +  ++ +Y   ++M   G +P  
Sbjct: 164 GRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDR 223

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           FT NS+   +CRR  V  A+ LVR+M  +G  P V   T+L+   C  G+  EAFR L  
Sbjct: 224 FTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDK 283

Query: 455 MVQEGFLPDIVCYSAAIGGLID--------------------------------IKRVDL 482
           M ++G  P    Y   + G+                                  + + D+
Sbjct: 284 MKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDM 343

Query: 483 ---ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
              A+E  + + A G   D  A+ I++S   K   V++  +L +  I  G  P    Y +
Sbjct: 344 AKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIM 403

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I       N  +A   L  M+ K   S  V++Y  +ID    AG  D A  +  EM++K
Sbjct: 404 VIKSLLNCKNFSKANHYLGHMVLKGLLS-SVMSYNMVIDCFVKAGAVDKAEEIVKEMQDK 462

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  PN +TF  LI+G  K      A V  +M+ E G  PD+  F +LI    +      A
Sbjct: 463 GFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA 522

Query: 660 FEVLKEM 666
           F   +EM
Sbjct: 523 FVCFEEM 529



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 6/193 (3%)

Query: 393 THFTLNSMFR-----CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            HF  +   R      L RR  VV +  LV ++R  G E   +    L++   + G A  
Sbjct: 112 AHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARY 171

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M + G  P    Y+A I   +    VD A   F+ + A GC PD   YN ++ 
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVH 231

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G+C+   V EA  L  +M  +G+ P+V TY +L++G+C +G +++A   L +M EK   +
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEK-GVA 290

Query: 568 PDVITYTTLIDGL 580
           P   TY TL+ G+
Sbjct: 291 PSEATYRTLVHGV 303


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 263/600 (43%), Gaps = 86/600 (14%)

Query: 3   SILSRARRI-APLRVLAQDVVKS-RCFMS-PGALGFLIRCLGSVGLV------------- 46
           +IL RA R  +P R   +  + + + F S P +   L+ CL S  L+             
Sbjct: 168 AILVRALRFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISPSPE 227

Query: 47  -----------EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
                      +EA  LF ++  +  C     SYN LL+ALC +  +        EM   
Sbjct: 228 SCNAVLCRLPLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEM--- 279

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D  T   ++  YC   + + A+ + +E+   G  ++   ++ ++      G+V  A
Sbjct: 280 ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++E M    + L+   F  ++ GF +K  +  A   FD+M K G A+D   Y  +I G
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+  +L+ A ++  EM+  G+                             D D  T T+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGL-----------------------------DVDAVTYTV 430

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L +   ++    G + +A+ +   M++                  V+PN  ++  + + L
Sbjct: 431 LIDGYCKV----GKMTEAFLVHNKMVQKR----------------VTPNVVTYTALSDGL 470

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A  L  EM   G   N+F YN+LI+GLC +  LE++   + +M+E+G KP  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T  ++   LC+ +++  A +L+++M  +G +P +    +L+   C  G+     R L  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+++   P+   Y++ +      K +    E+++ + +    P+   YNI+I G CKA+ 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITY 573
           + EA    +EMI KG   + ++YN LI    K     +A     +M  E+ +  PDV  +
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 232/498 (46%), Gaps = 30/498 (6%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A +L + + + N      ++ +L+       R+  A QLFD+M       D   Y +
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G C   +LE A++L SEM   G+  +    + +I    DEG+++  V+ + ED  ++
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR-VVEDMVMH 349

Query: 271 TMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            + L   +  ++M      G +  A N    M K    AD GV               ++
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD-GV---------------TY 393

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +IN L + G+L  A  + +EM   G   +   Y  LIDG C   ++ E++ +  +M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T  ++   LC++ DV  A  L+ +M  +G E  +     LI  LCK G   +
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R + DM + G  PD+  Y+  IG L   K +D A  L +++   G  P +V YN++++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C + RV   + L   M+ K + P+  TYN L+  +C   N+         ML +E   
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV-V 632

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+  TY  LI G C A    +A+   +EM EKG      ++ ALI  L K  +   A   
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 628 FRMMKEKGM--KPDMFVF 643
           F  M+++ +  +PD++ F
Sbjct: 693 FEKMRKERLTAEPDVYNF 710



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           +L + +  +SP+  S + ++  L     LD A+ LF+E+ +    +N   YN L+  LC 
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPE----KNTCSYNILLKALCT 265

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + R++++++L  EM      P   T   M    C   ++  A+ L+ +M  +G E     
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T +I  LC  G+  +A R + DMV  G + D   ++  + G      +  A   F ++ 
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G   D V Y  +I+GLC+A  + EAE +  EM  KGL     TY +LI+G+CK G + 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L  ++M++K   +P+V+TYT L DGLC  G    A  L +EM  KG   N  T+ +L
Sbjct: 443 EAFLVHNKMVQKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GLCK      A+     M E G+KPD++ +  +I A         A  +L+EM
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 215/472 (45%), Gaps = 37/472 (7%)

Query: 197 TKSGFASDAAMYDVIIGGLC-KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           T   F+SD   +D+++  LC  +  L + L+ Y      GI+P  E  + ++     + E
Sbjct: 190 TYKAFSSDPVSFDLLL--LCLPSAPLLLRLRQY------GISPSPESCNAVLCRLPLD-E 240

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              L +E+ E    NT +   N +++ L + G I  A+ L   M                
Sbjct: 241 AVQLFQELPEK---NTCSY--NILLKALCTAGRIKDAHQLFDEMAS-------------- 281

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  ++ I+++      +L+ A+ L  EM   G   N   Y ++I  LC+  ++
Sbjct: 282 -----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++  ++ +M   G         ++    CR+ D+  A N   +M+ +G        T L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LC+ G+  EA R L +M  +G   D V Y+  I G   + ++  A  +   +     
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +  GLCK   V  A +L +EM +KGL  ++ TYN LING CK+GN++QAM 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            +  M   E+G  PDV TYTT+I  LC +   D A  L  EM +KG  P  +T+  L+ G
Sbjct: 517 TMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            C   R          M EK + P+   + +L+  +  E N     E+ K M
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 224/509 (44%), Gaps = 27/509 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   L++ L + G +++A+ LFD++       P+  +Y  ++   C    ++     L E
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   +    T ++ + C+ GQ   A+ V  +++ HG V D  VF+ ++  F + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +  A    + M    +  +  T+  LI+G  +   + +A ++  +M   G   DA  Y V
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWED 266
           +I G CK  ++  A  ++++M    +TP+    + L      +G++     LL +   + 
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            ++N  T   NS++  L   G+++QA   ++ MI  +             +  + P+  +
Sbjct: 491 LELNIFTY--NSLINGLCKAGNLEQA---MRTMIDMD-------------EAGLKPDVYT 532

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  II  L +  +LD A SL +EM   G    +  YN L++G C S R+E    LL  M 
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E    P   T NS+ +  C  +++     + + M  Q   P      +LIK  CK     
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA  F ++M+++GF      Y+A I  L   K+   A  LF  +       +   YN  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
                   +     L +E++   L+ S+A
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLVKSIA 741


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 234/529 (44%), Gaps = 74/529 (13%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
            P+ + +  +L +L K+    +V    ++M+  G   +  TL+ L+  Y   GQ   + S
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           VF  I+  G+  D   F+ L+      GE+ KA    +++     +LN+ ++  LI+G  
Sbjct: 69  VFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLC 128

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  +   AL+   ++       D  MY+ II GLCK+K +  A  LY EM    I P   
Sbjct: 129 KVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV- 187

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
                                      V   TL+C      L     +  A  LL  MI 
Sbjct: 188 ---------------------------VTYNTLICG-----LCIMAQLKDAIGLLHKMIL 215

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            +                ++P   +F I+I+   K+GK+  A ++F  M +     N+  
Sbjct: 216 ED----------------INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVT 259

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           YN+L+DG          + L+  ++++          S+F  + +  D   A+NL  +M 
Sbjct: 260 YNSLMDG----------HHLVNVVKKA---------KSIFNTMIKMVD--EAMNLFEEMH 298

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            +   P +     LI  LCK G+   A +F+ +M   G  PDI  Y++ +  L     VD
Sbjct: 299 FKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVD 358

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A+EL   +   G  P V  YNI+I+GLCK+ R+ +AE +F +++ KG    V TYN +I
Sbjct: 359 KAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMI 418

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDA 589
            G+CK G  D+ +  +S+M  K+SG SPD      +I  L   G  D A
Sbjct: 419 KGFCKKGLFDETLAMVSKM--KDSGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 210/445 (47%), Gaps = 33/445 (7%)

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE--LTLLVKEIWEDRD 268
           I+G L K     + + L+ +M+ +G+  +   LS LI   S  G+  L+  V      + 
Sbjct: 18  ILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKG 77

Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
             +  +   ++++ L   G I +A +        + +   G ++          N  S+ 
Sbjct: 78  YGSDAITFTTLIKGLCLKGEIHKALHF------HDKVVAQGFKL----------NQVSYG 121

Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            +IN L K G+   AL   R +       +V +YN +IDGLC    + +++ L  EM   
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
              P+  T N++   LC    +  A+ L+ KM ++   P V   ++LI   CK GK  EA
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGG--LID------------IKRVDLALELFRDICAHG 494
                 M++E   P+IV Y++ + G  L++            IK VD A+ LF ++    
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
             PD+V YN +I GLCK+ R   A     EM  +G  P + TYN L++  CK+ ++D+A+
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
             L++ L+ +   P V TY  LI+GLC +GR  DA  ++ ++  KG   +  T+ A+I G
Sbjct: 362 ELLTK-LKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKG 420

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPD 639
            CK       L     MK+ G  PD
Sbjct: 421 FCKKGLFDETLAMVSKMKDSGCSPD 445



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 180/368 (48%), Gaps = 15/368 (4%)

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
           +++     +P+   F  I+ +L+K     + +SL R+M   G   N+   + LI+     
Sbjct: 1   MLLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQL 60

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            +   S+ +   + + G+     T  ++ + LC + ++  AL+   K+  QG +      
Sbjct: 61  GQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSY 120

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
             LI  LCK G+   A  FL  +  +   PD+V Y+  I GL   K V+ A  L+ ++ A
Sbjct: 121 GTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVA 180

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
              CP VV YN +I GLC   ++ +A  L ++MI + + P+V T+++LI+ +CK G + +
Sbjct: 181 KRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKE 240

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAG--------------RPDDAIMLWNEMEE 598
           A    + M+ KE   P+++TY +L+DG  +                  D+A+ L+ EM  
Sbjct: 241 AKNVFAVMM-KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHF 299

Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
           K   P+ + + +LI GLCK  R   AL     M  +G  PD+F + +L+ A     +   
Sbjct: 300 KQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDK 359

Query: 659 AFEVLKEM 666
           A E+L ++
Sbjct: 360 AIELLTKL 367



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 65/376 (17%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           + G LI  L  VG    A     ++  + L  P+   YN +++ LCK   V+       E
Sbjct: 119 SYGTLINGLCKVGQTRAALEFLRRIDGK-LVQPDVVMYNTIIDGLCKDKLVNDAFNLYFE 177

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE-IIDHGWVDEHVFSILLVAFSKWGE 150
           M          T   L+   C   Q   A+ + ++ I++      + FSIL+ AF K G+
Sbjct: 178 MVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGK 237

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGF-----VKKSR---------VDKALQLFDKM 196
           + +A  +   M   +++ N  T+  L+ G      VKK++         VD+A+ LF++M
Sbjct: 238 MKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEM 297

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
                  D  +Y+ +I GLCK+ +   AL+   EM   G  PD                 
Sbjct: 298 HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDI---------------- 341

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
                               NS++  L  N  +D+A  LL  +       D G++     
Sbjct: 342 -----------------FTYNSLLDALCKNYHVDKAIELLTKL------KDQGIQ----- 373

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  +++I+IN L K G+L  A  +F ++   G   +V+ YN +I G C     +
Sbjct: 374 -----PSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFD 428

Query: 377 ESYELLREMEESGFKP 392
           E+  ++ +M++SG  P
Sbjct: 429 ETLAMVSKMKDSGCSP 444



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 36/283 (12%)

Query: 8   ARRIAPLRVLAQDVVKSRCFMS------------------PGALGF--LIRCLGSVGLVE 47
           A+RI P  V    ++   C M+                  P    F  LI      G ++
Sbjct: 180 AKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMK 239

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEAL--------CKSCSVDLVEM------RLKEMQ 93
           EA  +F  + +E +  PN  +YN L++           KS    +++M        +EM 
Sbjct: 240 EAKNVFAVMMKEDV-KPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMH 298

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
                 D      L+   C SG+   AL    E+   G   D   ++ LL A  K   VD
Sbjct: 299 FKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVD 358

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           KA EL+ ++ D  I+ +  T+ +LI+G  K  R+  A ++F+ +   G+ +D   Y+ +I
Sbjct: 359 KAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMI 418

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            G CK    +  L + S+MK SG +PD +    +I S  D+GE
Sbjct: 419 KGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGE 461


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 219/497 (44%), Gaps = 57/497 (11%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A  L   + D N+     +  +L+   +   R+  A Q FD+M+      D   Y  
Sbjct: 240 LDEAIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGT 292

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G C   +LE A++L  EM   G+  +  + + +I                       
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIA---------------------- 330

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              LLCN         G +  A  +L+ M     +  V ++ ++            F  +
Sbjct: 331 ---LLCN--------KGQVSDALRVLEDMT----MHGVALDAVV------------FTTV 363

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           I+     G L  A  LF EM + G   +   +  LI+GLC +  L+E+  +L+EM + G 
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                T   +    C+R ++V A  +  +M  +   P V   T L   LCK G    A  
Sbjct: 424 DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANE 483

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M  +G   ++  Y++ I GL     ++ A+ +  ++ A G   DV  Y  +I  LC
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K+     A ++  EM+ KG+ PS+ATYN+L+NG+C SG ++     L  MLEK    P+V
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV-RPNV 602

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           +TY +L+   CI         ++  M  +  APN  T+  LI G CK    + AL   + 
Sbjct: 603 VTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQE 662

Query: 631 MKEKGMKPDMFVFVALI 647
           M EKG++     + ALI
Sbjct: 663 MIEKGLRLTASSYSALI 679



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 238/554 (42%), Gaps = 63/554 (11%)

Query: 101 KYTLTPLLQVYCNSG----QFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
           +Y L+P  +  CN+       D+A+++F E+ D         +ILL A    G +  AC+
Sbjct: 221 QYGLSPSPES-CNAVLSRLPLDEAIALFRELPDKNVCSH---NILLKALLSAGRLKDACQ 276

Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
                D+ +   +  T+  ++HG+  +  ++ A++L D+M   G  S+A +Y  +I  LC
Sbjct: 277 ---HFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLC 333

Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
              Q+  AL++  +M   G+  D  + + +I+                            
Sbjct: 334 NKGQVSDALRVLEDMTMHGVALDAVVFTTVISG--------------------------- 366

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
                   S G +  A  L + M K    AD                  +   +IN L +
Sbjct: 367 ------FCSKGDLAAARRLFEEMQKRGLAAD----------------RVTHTALINGLCR 404

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G+L  A  + +EM   G   +V  Y  LIDG C    + E++ +  EM      P   T
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
             ++   LC++ DV  A  L+ +M  +G E  V     LI  LCK G   +A R +T+M 
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G   D+  Y+  I  L      D A  + +++   G  P +  YN++++G C + RV 
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
             + L   M+ K + P+V TYN L+  +C   N+         M  +E  +P+  TY  L
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV-APNENTYNIL 643

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           I G C A    +A+    EM EKG      ++ ALI  L K  +   A V F  M+ +G+
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGL 703

Query: 637 --KPDMFVFVALIS 648
             +PD++ F   IS
Sbjct: 704 TAEPDVYSFYMDIS 717



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 219/474 (46%), Gaps = 41/474 (8%)

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE----ILSKLITSCSD 252
           T   F+SD A +D+++  LC       + +L   ++  G++P  E    +LS+L      
Sbjct: 192 TYKAFSSDPASFDLLL--LCLP-----SAELLRRLRQYGLSPSPESCNAVLSRLPLD--- 241

Query: 253 EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
             E   L +E+  D++V +  +L    ++ L+S G +  A      M             
Sbjct: 242 --EAIALFREL-PDKNVCSHNIL----LKALLSAGRLKDACQHFDEM------------- 281

Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
                 +  P+  ++  +++     G+L+ A+ L  EM   G   N  +Y ++I  LCN 
Sbjct: 282 ------SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNK 335

Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
            ++ ++  +L +M   G         ++    C + D+  A  L  +M+ +G       +
Sbjct: 336 GQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTH 395

Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           T LI  LC+ G+  EA R L +MV +G   D+V Y+  I G      +  A  +  ++  
Sbjct: 396 TALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG 455

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
               P+VV Y  +  GLCK   V  A +L +EM  KGL  +V TYN LING CK GN++Q
Sbjct: 456 RRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQ 515

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
           AM  ++ M E      DV TYTTLID LC +G  D A  +  EM +KG  P+  T+  L+
Sbjct: 516 AMRIMTEM-EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLM 574

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            G C   R          M EK ++P++  + +L+  +  + N     E+ K M
Sbjct: 575 NGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM 628



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 264/581 (45%), Gaps = 48/581 (8%)

Query: 3   SILSRARRI-APLR-VLAQDVVKSRCFMS-PGALGFLIRCLGSVGLVEEANMLFDQVKRE 59
           +IL RA R  +P R  + Q +   + F S P +   L+ CL S  L+        ++++ 
Sbjct: 170 AILVRALRFPSPHRHFVEQFIFTYKAFSSDPASFDLLLLCLPSAELLR-------RLRQY 222

Query: 60  GLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDK 119
           GL  P+  S N +L  L    ++ L     +E+ D         L  LL    ++G+   
Sbjct: 223 GLS-PSPESCNAVLSRLPLDEAIAL----FRELPDKNVCSHNILLKALL----SAGRLKD 273

Query: 120 ALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
           A   F+E+      D   +  ++  +   GE++ A +L++ M    +  N   +  +I  
Sbjct: 274 ACQHFDEM--SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIAL 331

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
              K +V  AL++ + MT  G A DA ++  +I G C    L  A +L+ EM+  G+  D
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 240 FEILSKLITSCSDEGELTLLVKEIWE------DRDVNTMTLLCNSIMRILVSNGSIDQAY 293
               + LI      GEL    + + E      D DV T T+L +   +     G++ +A+
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCK----RGNMVEAF 447

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            +   M+                   V+PN  ++  + + L K G +  A  L  EM   
Sbjct: 448 RVHNEMVGRR----------------VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   NV+ YN+LI+GLC    LE++  ++ EME +G +   +T  ++   LC+  +   A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551

Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
            N++++M  +G +P +    +L+   C  G+     + L  M+++   P++V Y++ +  
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQ 611

Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
               K +    E+++ + +    P+   YNI+I G CKA+ + EA     EMI KGL  +
Sbjct: 612 YCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLT 671

Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITY 573
            ++Y+ LI    K     +A +   +M  E  +  PDV ++
Sbjct: 672 ASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 208/477 (43%), Gaps = 25/477 (5%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L++ L S G +++A   FD++       P+  +Y  ++   C    ++     L EM   
Sbjct: 261 LLKALLSAGRLKDACQHFDEMSSP----PDVVTYGTMVHGYCVRGELENAVKLLDEMAAK 316

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKA 154
           G   +    T ++ + CN GQ   AL V  ++  HG  +D  VF+ ++  F   G++  A
Sbjct: 317 GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAA 376

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L E M    +  +  T   LI+G  +   + +A ++  +M   G   D   Y V+I G
Sbjct: 377 RRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDG 436

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
            CK   +  A ++++EM G  + P+    + L      +G++    + + E  ++ +   
Sbjct: 437 YCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
               NS++  L   G+++QA  ++  M       DV                 ++  +I+
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV----------------YTYTTLID 540

Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
           TL K G+ D A ++ +EM   G   ++  YN L++G C S R+E   +LL  M E   +P
Sbjct: 541 TLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP 600

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
              T NS+ +  C  +++     + + M  Q   P      +LIK  CK     EA  F 
Sbjct: 601 NVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFH 660

Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNIIIS 507
            +M+++G       YSA I  L   K+   A   F  +   G    PDV ++ + IS
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717


>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Glycine max]
          Length = 1064

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 186/724 (25%), Positives = 317/724 (43%), Gaps = 106/724 (14%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+  L  +G V E   L   ++REGL + +   Y+       +   +  V  R++EM + 
Sbjct: 201 LVGALCKMGRVGEVCGLVQWMEREGLGL-DVVLYSAWACGYVEERVLGEVFGRMREMVEK 259

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           G G+D  + T L+  +   G  +K+ +   ++I  G     V +S ++ A+ K G+V++A
Sbjct: 260 GIGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEA 319

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             + E M D  I L+E  F +LI GF +    DK   LFD+M +SG +     Y+ ++ G
Sbjct: 320 FGVFESMKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNG 379

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTM 272
           L K+ +   A +L   +    IT      S L+    +E  +   L  K   E+  ++  
Sbjct: 380 LSKHGRTSEADELLKNVAADVIT-----YSTLLHGYMEEENIPGILQTKRRLEESGISMD 434

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD-------------VG-----VEMLM 314
            ++CN ++R L   G+ +  Y L + M + + I +             VG     +E+  
Sbjct: 435 VVMCNVLIRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFD 494

Query: 315 IFKGTVSPNTSSFDIIINTLLKDG---------------KLDLALSLFREMTQ------- 352
            F+ T+  + + ++ IIN L K+G                L+L +  FR +T+       
Sbjct: 495 EFRKTLISSLACYNSIINGLCKNGMTEMAIEALLELNHEGLELDIGTFRMLTKTIFEENN 554

Query: 353 -------------IG-------CMQNVFL----------------------------YNN 364
                        +G       C  ++FL                            Y +
Sbjct: 555 TKKALDLVYRMEGLGPDIYSSVCNDSIFLLCQRGLLDDANHMWMMMKKKGLSVTCNSYYS 614

Query: 365 LIDGLCNSNRLEESYELLRE-MEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           ++ G  N+   E+ Y LL   +++ G  +P    + + + CL   +DV GA+  + K   
Sbjct: 615 ILRGHLNNGNREQIYPLLNSFLKDYGLVEPMVQKILACYLCL---KDVNGAIRFLGK--T 669

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
             +   V   T ++K L K G+A++A+R +T+  Q+        Y+  I GL     ++ 
Sbjct: 670 MDNSSTVTFLTSILKILIKEGRALDAYRLVTE-TQDNLPVMYADYAIVIDGLCKGGYLNK 728

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
           AL+L   +   G   ++V YN II+GLC   R+ EA  L + +    L+PS  TY  +I 
Sbjct: 729 ALDLCAFVEKKGMNLNIVIYNSIINGLCHEGRLIEAFRLLDSIEKLNLVPSEITYATVIY 788

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
             C+ G +  A    S+M+ K    P V  Y +L+DG+   G+ + A  L N+ME K   
Sbjct: 789 ALCREGFLLDAEHVFSKMVLK-GFQPKVQVYNSLLDGISKFGQLEKAFELLNDMETKYIE 847

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
           P+ +T  A+I   C+      AL  +   K K M PD F F+ LI    ++     A  V
Sbjct: 848 PDSLTISAVINCYCQKGDMHGALEFYYKFKRKDMSPDFFGFLYLIRGLCTKGRMEEARSV 907

Query: 663 LKEM 666
           L+EM
Sbjct: 908 LREM 911



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 155/649 (23%), Positives = 273/649 (42%), Gaps = 121/649 (18%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI   G +G  ++   LFD+++R G+  P+  +YN ++  L K       +  LK +   
Sbjct: 341 LIDGFGRIGDFDKVFCLFDEMERSGIS-PSVVAYNAVMNGLSKHGRTSEADELLKNV--- 396

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D  T + LL  Y         L     + + G  +D  + ++L+ A    G  +  
Sbjct: 397 --AADVITYSTLLHGYMEEENIPGILQTKRRLEESGISMDVVMCNVLIRALFMMGAFEDV 454

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L + M + ++  N  T+C +I G+ K  R+++AL++FD+  K+   S  A Y+ II G
Sbjct: 455 YALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEFRKT-LISSLACYNSIING 513

Query: 215 LCKNKQLEMALQLYSEMKGSGITPD---FEILSKLI------------------------ 247
           LCKN   EMA++   E+   G+  D   F +L+K I                        
Sbjct: 514 LCKNGMTEMAIEALLELNHEGLELDIGTFRMLTKTIFEENNTKKALDLVYRMEGLGPDIY 573

Query: 248 -TSCSD------EGELTLLVKEIWEDRDVNTMTLLCNS---IMRILVSNGSIDQAYNLLQ 297
            + C+D      +  L      +W       +++ CNS   I+R  ++NG+ +Q Y LL 
Sbjct: 574 SSVCNDSIFLLCQRGLLDDANHMWMMMKKKGLSVTCNSYYSILRGHLNNGNREQIYPLLN 633

Query: 298 AMIKGEPIADVGVEMLMI-------------FKGTVSPNTSS------------------ 326
           + +K   + +  V+ ++              F G    N+S+                  
Sbjct: 634 SFLKDYGLVEPMVQKILACYLCLKDVNGAIRFLGKTMDNSSTVTFLTSILKILIKEGRAL 693

Query: 327 -------------------FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLID 367
                              + I+I+ L K G L+ AL L   + + G   N+ +YN++I+
Sbjct: 694 DAYRLVTETQDNLPVMYADYAIVIDGLCKGGYLNKALDLCAFVEKKGMNLNIVIYNSIIN 753

Query: 368 GLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
           GLC+  RL E++ LL  +E+    P+  T  ++   LCR   ++ A ++  KM ++G +P
Sbjct: 754 GLCHEGRLIEAFRLLDSIEKLNLVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQP 813

Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
            V+    L+  + K G+  +AF  L DM  +   PD +  SA I        +  ALE +
Sbjct: 814 KVQVYNSLLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVINCYCQKGDMHGALEFY 873

Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
                    PD   +  +I GLC   R+ EA  +  EM+                   +S
Sbjct: 874 YKFKRKDMSPDFFGFLYLIRGLCTKGRMEEARSVLREML-------------------QS 914

Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
            N+ + +  +++ ++ ES S         +  LC  GR  +A+ + NE+
Sbjct: 915 KNVVELINIVNKEVDTESISD-------FLGTLCEQGRVQEAVTVLNEI 956



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 151/349 (43%), Gaps = 7/349 (2%)

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           G + PN  +   ++  L K G++     L + M + G   +V LY+    G      L E
Sbjct: 189 GGLRPNVVTCTALVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGE 248

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
            +  +REM E G      +   +     +  DV  +   + KM  +GH P     + ++ 
Sbjct: 249 VFGRMREMVEKGIGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMS 308

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
             CK GK  EAF     M   G   D   +   I G   I   D    LF ++   G  P
Sbjct: 309 AYCKKGKVEEAFGVFESMKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISP 368

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
            VVAYN +++GL K  R +EA++L      K +   V TY+ L++G+ +  NI   +L  
Sbjct: 369 SVVAYNAVMNGLSKHGRTSEADELL-----KNVAADVITYSTLLHGYMEEENI-PGILQT 422

Query: 558 SRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            R LE+   S DV+    LI  L + G  +D   L+  M E    PN +T+  +I G CK
Sbjct: 423 KRRLEESGISMDVVMCNVLIRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMIDGYCK 482

Query: 618 CDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             R   AL  F   + K +   +  + ++I+         +A E L E+
Sbjct: 483 VGRIEEALEVFDEFR-KTLISSLACYNSIINGLCKNGMTEMAIEALLEL 530



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 113/508 (22%), Positives = 225/508 (44%), Gaps = 35/508 (6%)

Query: 152 DKACELIER-MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG--FASDAAMY 208
           +KA  +++R + D  +  +  TFC+++H    K  + +A+++ + M   G  +  D  + 
Sbjct: 103 EKALSVLQRCVRDRGVLPSSSTFCLVVHKLSSKGLMGRAIEVLELMAGDGVRYPFDDFVC 162

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILSKLITSC---SDEGELTLLVKEIW 264
             +I G C+  + E+AL  +  +    G+ P+    + L+ +       GE+  LV+  W
Sbjct: 163 SSVISGFCRIGKPELALGFFKNVTDCGGLRPNVVTCTALVGALCKMGRVGEVCGLVQ--W 220

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
            +R+   + ++  S             A   ++  + GE     G    M+ KG +  + 
Sbjct: 221 MEREGLGLDVVLYSAW-----------ACGYVEERVLGEVF---GRMREMVEKG-IGHDF 265

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            S+ ++++   K G ++ + +   +M + G   N   Y+ ++   C   ++EE++ +   
Sbjct: 266 VSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFES 325

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M++ G     +    +     R  D      L  +M   G  P V     ++  L KHG+
Sbjct: 326 MKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHGR 385

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
             EA   L ++       D++ YS  + G ++ + +   L+  R +   G   DVV  N+
Sbjct: 386 TSEADELLKNVA-----ADVITYSTLLHGYMEEENIPGILQTKRRLEESGISMDVVMCNV 440

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +I  L       +   L+  M    LIP+  TY  +I+G+CK G I++A+        ++
Sbjct: 441 LIRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEF--RK 498

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
           +    +  Y ++I+GLC  G  + AI    E+  +G   +  TF  L   + + +  + A
Sbjct: 499 TLISSLACYNSIINGLCKNGMTEMAIEALLELNHEGLELDIGTFRMLTKTIFEENNTKKA 558

Query: 625 L-VHFRMMKEKGMKPDMFVFVALISAFL 651
           L + +RM   +G+ PD++  V   S FL
Sbjct: 559 LDLVYRM---EGLGPDIYSSVCNDSIFL 583



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 44/341 (12%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ--NVFLYNNLIDGLCNSNRLEE 377
           V P++S+F ++++ L   G +  A+ +   M   G     + F+ +++I G C   + E 
Sbjct: 118 VLPSSSTFCLVVHKLSSKGLMGRAIEVLELMAGDGVRYPFDDFVCSSVISGFCRIGKPEL 177

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
           +    + + + G                                  G  P V   T L+ 
Sbjct: 178 ALGFFKNVTDCG----------------------------------GLRPNVVTCTALVG 203

Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
            LCK G+  E    +  M +EG   D+V YSA   G ++ + +       R++   G   
Sbjct: 204 ALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREMVEKGIGH 263

Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
           D V+Y +++ G  K   V ++     +MI +G  P+  TY+ +++ +CK G +++A    
Sbjct: 264 DFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVF 323

Query: 558 SRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
             M  K+ G   D   +  LIDG    G  D    L++EME  G +P+ + + A++ GL 
Sbjct: 324 ESM--KDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLS 381

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           K  R   A         K +  D+  +  L+  ++ E N P
Sbjct: 382 KHGRTSEADELL-----KNVAADVITYSTLLHGYMEEENIP 417


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 247/560 (44%), Gaps = 61/560 (10%)

Query: 64  PNNYSYNCLLEALCK---SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           PN  + N LL  L +   S S+        +M   G   D  T   L+  YC  G+ + A
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDA 223

Query: 121 LSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L +   ++    V  D   ++ +L A SK G +    +L+  M    +  N  T+  L++
Sbjct: 224 LGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVY 283

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+ K   + +A Q+ + M ++    D   Y+++I G+C    +   L+L   MK   + P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQP 343

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
           D    + LI  C + G                 ++L    +M  + ++G           
Sbjct: 344 DVVTYNTLIDGCFELG-----------------LSLEAKKLMEQMENDG----------- 375

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI-GCMQ 357
                                V PN  + +I +  L K+ K +      +E+ ++ G   
Sbjct: 376 ---------------------VKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSP 414

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           ++  Y+ LI        L  + E++REM + G K    TLN++   LC+ + V  A NL+
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474

Query: 418 RKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
                +G+    V + TL++    +  K  +AF    +M +    P +  +++ IGGL  
Sbjct: 475 DSAHKRGYIVDEVTYGTLIMGYF-REEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             + +LA+E F ++   G  PD   +N II G CK  RV +A + +NE I     P   T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 537 YNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
            N+L+NG CK G  ++A+   + ++ E+E    D +TY T+I   C   +  +A  L +E
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITEREV---DTVTYNTMISAFCKDKKLKEAYDLLSE 650

Query: 596 MEEKGCAPNRITFMALITGL 615
           MEEK   P+R T+ ++IT L
Sbjct: 651 MEEKRLEPDRFTYNSIITSL 670



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 270/566 (47%), Gaps = 50/566 (8%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR---VDKALQLF 193
           +F I L A+   G+   A ++ ++M    ++ N  T   L+ G V+      +  A ++F
Sbjct: 133 LFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVF 192

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSD 252
           D M K G + D   ++V++ G C   +LE AL +   M     + PD    + ++ + S 
Sbjct: 193 DDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSK 252

Query: 253 EGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV- 308
           +G L+  VK++  D   N +    +  N+++      GS+ +A+ +++ M +   + D+ 
Sbjct: 253 KGRLSD-VKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311

Query: 309 -----------------GVEMLMIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSL---- 346
                            G+E++ + K   + P+  +++ +I     DG  +L LSL    
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLI-----DGCFELGLSLEAKK 366

Query: 347 -FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-EESGFKPTHFTLNSMFRCL 404
              +M   G   N   +N  +  LC   + EE    ++E+ E  GF P   T +++ +  
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEAFRFLTDMVQEGF 460
            +  D+ GAL ++R+M  +G    +K NT+    ++  LCK  K  EA   L    + G+
Sbjct: 427 LKVGDLSGALEMMREMGQKG----IKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGY 482

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           + D V Y   I G    ++V+ A E++ ++      P V  +N +I GLC   +   A +
Sbjct: 483 IVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAME 542

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
            F+E+   GL+P   T+N +I G+CK G +++A    +  + K S  PD  T   L++GL
Sbjct: 543 KFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESI-KHSFKPDNYTCNILLNGL 601

Query: 581 CIAGRPDDAIMLWNEM-EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           C  G  + A+  +N +  E+    + +T+  +I+  CK  + + A      M+EK ++PD
Sbjct: 602 CKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPD 659

Query: 640 MFVFVALISAFLSELNPPLAFEVLKE 665
            F + ++I++ + +     A E+LK+
Sbjct: 660 RFTYNSIITSLMEDGKLSEADELLKK 685



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/502 (23%), Positives = 231/502 (46%), Gaps = 26/502 (5%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
           IA  R +  D+VK    +       L+      G +E+A  + +++  E    P+N +YN
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244

Query: 71  CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
            +L+A+ K   +  V+  L +M+  G   ++ T   L+  YC  G   +A  +  E++  
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQ 303

Query: 131 GWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
             +  D   ++IL+      G + +  EL++ M    ++ +  T+  LI G  +     +
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEILSKLI 247
           A +L ++M   G   +   +++ +  LCK ++ E   +   E+ +  G +PD      LI
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLI 423

Query: 248 TSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
            +    G+L+  ++ + E   + +   T+  N+I+  L     +D+A+NLL +  K   I
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483

Query: 306 AD---VGVEMLMIFKG----------------TVSPNTSSFDIIINTLLKDGKLDLALSL 346
            D    G  ++  F+                  ++P  ++F+ +I  L   GK +LA+  
Sbjct: 484 VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEK 543

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F E+ + G + +   +N++I G C   R+E+++E   E  +  FKP ++T N +   LC+
Sbjct: 544 FDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 ALN    +  +     V +NT +I   CK  K  EA+  L++M ++   PD   
Sbjct: 604 EGMTEKALNFFNTLITEREVDTVTYNT-MISAFCKDKKLKEAYDLLSEMEEKRLEPDRFT 662

Query: 467 YSAAIGGLIDIKRVDLALELFR 488
           Y++ I  L++  ++  A EL +
Sbjct: 663 YNSIITSLMEDGKLSEADELLK 684



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 211/472 (44%), Gaps = 34/472 (7%)

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF----EILSKLITSCSDEGELTLLVK 261
           A++D+ +       +  +ALQ++ +M    + P+      +L  L+   S     +   +
Sbjct: 132 ALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIAS--AR 189

Query: 262 EIWEDR-------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
           E+++D        DV T  +L N         G ++ A  +L+ M+              
Sbjct: 190 EVFDDMVKIGVSLDVKTFNVLVNGY----CLEGKLEDALGMLERMVS------------- 232

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             +  V+P+  +++ I+  + K G+L     L  +M + G + N   YNNL+ G C    
Sbjct: 233 --EFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGS 290

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           L+E+++++  M+++   P   T N +   +C    +   L L+  M+    +P V     
Sbjct: 291 LKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNT 350

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI-DIKRVDLALELFRDICAH 493
           LI    + G ++EA + +  M  +G  P+ V ++ ++  L  + KR ++  ++   +  H
Sbjct: 351 LIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH 410

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           G  PD+V Y+ +I    K   ++ A ++  EM  KG+  +  T N +++  CK   +D+A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
              L     K     D +TY TLI G     + + A  +W+EM+     P   TF +LI 
Sbjct: 471 HNLLDSA-HKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIG 529

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           GLC   +   A+  F  + E G+ PD   F ++I  +  E     AFE   E
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE 581



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 3/326 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-EESGFKPTHFTLNSMF 401
           A  +F +M +IG   +V  +N L++G C   +LE++  +L  M  E    P + T N++ 
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
           + + ++  +    +L+  M+  G  P  V +N L +   CK G   EAF+ +  M Q   
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNL-VYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
           LPD+  Y+  I G+ +   +   LEL   + +    PDVV YN +I G  +     EA+ 
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
           L  +M   G+ P+  T+N+ +   CK    ++    +  ++E    SPD++TY TLI   
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
              G    A+ +  EM +KG   N IT   ++  LCK  +   A        ++G   D 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDE 486

Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
             +  LI  +  E     AFE+  EM
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEM 512



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 102/191 (53%), Gaps = 3/191 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK---AQRVAEA 518
           P    +  A+   +   +  +AL++F+ +      P+++  N ++ GL +   +  +A A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++F++M+  G+   V T+N+L+NG+C  G ++ A+  L RM+ + + +PD +TY T++ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            +   GR  D   L  +M+  G  PNR+T+  L+ G CK    + A     +MK+  + P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 639 DMFVFVALISA 649
           D+  +  LI+ 
Sbjct: 309 DLCTYNILING 319



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 3/175 (1%)

Query: 25  RCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
           R  ++P    F  LI  L   G  E A   FD++   GL +P++ ++N ++   CK   V
Sbjct: 514 RIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGL-LPDDCTFNSIILGYCKEGRV 572

Query: 83  DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILL 142
           +       E   + +  D YT   LL   C  G  +KAL+ FN +I    VD   ++ ++
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMI 632

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
            AF K  ++ +A +L+  M++  +  +  T+  +I   ++  ++ +A +L  K +
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFS 687


>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13800
 gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
 gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 883

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 261/616 (42%), Gaps = 71/616 (11%)

Query: 68  SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
           +Y  ++  LC    ++  E  + +M+ +G   D Y  + +++ +  +    KA+ VFN++
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352

Query: 128 ID-HGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
           +     ++  + S +L  + + G   +A +L +   + NI L+   + V      K  +V
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412

Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
           ++A++LF +MT  G A D   Y  +IGG C   +   A  L  EM G+G TPD  I + L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472

Query: 247 ITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA---YNLLQ---- 297
               +  G  +      ++ E+R V    +  N ++  L+  G +D+A   Y  L+    
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532

Query: 298 ----AMIKGEPIA---DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
               +M+KG   A   D   E  +  +  + P +  F +  +   +   +  A  L   M
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFPL-PKSVYFTLFTSLCAEKDYISKAQDLLDRM 591

Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR---- 406
            ++G      +Y  LI   C  N + ++ E    +      P  FT   M    CR    
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEP 651

Query: 407 ---------------RQDVVG---------ALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
                          + DVV           L++ R+M      P V + T++I   C  
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
               + +    DM +   +PD+V Y+  +    +         L R++ A    PDV  Y
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYY 764

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
            ++I   CK   + EA+ +F++MI  G+ P  A Y  LI   CK G + +A +   RM+E
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824

Query: 563 KESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
             SG  PDV+ YT LI G C  G    A+ L  EM EKG  P + +  A           
Sbjct: 825 --SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA----------- 871

Query: 622 RAALVHFRMMKEKGMK 637
               VH+  +K KG++
Sbjct: 872 ----VHYAKLKAKGLR 883



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 136/586 (23%), Positives = 242/586 (41%), Gaps = 41/586 (6%)

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE------HVFSILLVAFSKWG 149
           GWG DK   T L ++    G   +  SV + +   G +++       V + L+ A++   
Sbjct: 102 GWGLDKKLDTFLFEL-VRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLD 160

Query: 150 EVDKACELIERMDDCNIRLNE-KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
             D+A ++  R      R  + K    LI   +   R D  +  F ++ + G  +DA  Y
Sbjct: 161 MFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTY 220

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
            +++  L +N   E   +L S +          ++S+    C       +      E   
Sbjct: 221 VLVVQALWRNDDKEELEKLLSRL----------LISETRNPC-------VFYLNFIEGLC 263

Query: 269 VNTMTLLCNSIMR------ILVSNGSIDQAY-NLLQAMIKGEPIADVGVEMLMIFKGTVS 321
           +N MT +   +++      ILV    +  AY  +++ +     I D    +L + K  + 
Sbjct: 264 LNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID 323

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   +  II    K+  +  A+ +F +M +     N  + ++++   C      E+Y+L
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
            +E  E+         N  F  L +   V  A+ L R+M  +G  P V + T LI   C 
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            GK  +AF  + +M   G  PDIV Y+   GGL        A E  + +   G  P  V 
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           +N++I GL  A  + +AE  +  +  K      +    ++ G+C +G +D A     R +
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHA---FERFI 556

Query: 562 EKESGSPDVITYTTLIDGLCI-AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             E   P  + Y TL   LC        A  L + M + G  P +  +  LI   C+ + 
Sbjct: 557 RLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNN 615

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            R A   F ++  K + PD+F +  +I+ +     P  A+ + ++M
Sbjct: 616 VRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 222/539 (41%), Gaps = 75/539 (13%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +++C   +G   EA  LF + +   + + +   YN   +AL K   V+      +EM   
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISL-DRVCYNVAFDALGKLGKVEEAIELFREMTGK 425

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G   D    T L+   C  G+   A  +  E+   G   D  ++++L    +  G   +A
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM------- 207
            E ++ M++  ++    T  ++I G +    +DKA   ++ +      +DA+M       
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545

Query: 208 ---------------------YDVIIGGLCKNKQ-LEMALQLYSEMKGSGITPDFEILSK 245
                                Y  +   LC  K  +  A  L   M   G+ P+  +  K
Sbjct: 546 GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605

Query: 246 LITSC--------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           LI +         + E    L+ K+I  D  + T T++ N+  R+        QAY L +
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPD--LFTYTIMINTYCRL----NEPKQAYALFE 659

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            M + +                V P+  ++ +++N+   D +LD+     REM     + 
Sbjct: 660 DMKRRD----------------VKPDVVTYSVLLNS---DPELDMK----REMEAFDVIP 696

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           +V  Y  +I+  C+ N L++ Y L ++M+     P   T   + +    R       NL 
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER-------NLS 749

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
           R+M+    +P V + T+LI   CK G   EA R    M++ G  PD   Y+A I     +
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809

Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
             +  A  +F  +   G  PDVV Y  +I+G C+   V +A  L  EM+ KG+ P+ A+
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 177/430 (41%), Gaps = 34/430 (7%)

Query: 40  LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
           L + GL +EA      ++  G+  P   ++N ++E L  +  +D  E   + ++      
Sbjct: 476 LATNGLAQEAFETLKMMENRGV-KPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN 534

Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
           D      +++ +C +G  D A   F  + +        F++     ++   + KA +L++
Sbjct: 535 D----ASMVKGFCAAGCLDHAFERFIRL-EFPLPKSVYFTLFTSLCAEKDYISKAQDLLD 589

Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
           RM    +   +  +  LI  + + + V KA + F+ +       D   Y ++I   C+  
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN 649

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           + + A  L+ +MK   + PD    S L+ S   E ++   ++      DV   T++ N  
Sbjct: 650 EPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVIPDVVYYTIMINRY 708

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
             +      + + Y L + M + E + DV                     +  T+L   K
Sbjct: 709 CHL----NDLKKVYALFKDMKRREIVPDV---------------------VTYTVLLKNK 743

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
            +  LS  REM       +VF Y  LID  C    L E+  +  +M ESG  P      +
Sbjct: 744 PERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +  C C+   +  A  +  +M   G +P V   T LI   C++G  ++A + + +M+++G
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861

Query: 460 FLPDIVCYSA 469
             P     SA
Sbjct: 862 IKPTKASLSA 871


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 219/487 (44%), Gaps = 59/487 (12%)

Query: 137 VFSILLVAFSKWGEVDKA---CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
            ++  L    K G++++A   C  ++     +   +  T   +I    K  RVD AL L 
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           + M K G+  D A + ++I  LCK  +++ A +    M                      
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM---------------------- 110

Query: 254 GELTLLVKEIWEDRDVNTMTLLC---NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
                       +R ++T    C   NS++  L     + QA+ +   M+          
Sbjct: 111 ------------NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS--------- 149

Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
                 + +V P+  S+ I+I+   K  +L  A  L+++M  + C+ NV  YN  ++GL 
Sbjct: 150 ------ERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLM 203

Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFR--CLCRRQDVVGALNLVRKMRVQGHEPW 428
              R+ ++  +  EM  +G  P   T +++     L R+ D   A  L   M  +G  P 
Sbjct: 204 RKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD--QAHELFEAMISRGCRPN 261

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
                 L+  LCK  K  EA      MV+ G  PD V Y+  + G  ++ +++ A+E+F 
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++ + G  PDVVAYN ++ G  +A +  EA  LF  M+++   P   ++N++I+G  K+ 
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            +D A+    RM +    SPD++TY +LI GLC   R  +A+ ++ E++    +P+   F
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 441

Query: 609 MALITGL 615
             L+  +
Sbjct: 442 NVLLEAM 448



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 24/406 (5%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------------FK 317
           C+S+++ L   G +D A +LL+ MIK     D+    ++I                    
Sbjct: 52  CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111

Query: 318 GTVSPNTSS---FDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSN 373
            T+S   SS   ++ ++N+L K  K+  A ++F  M ++   + +V  Y+ LIDG C  +
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171

Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
            L  + +L ++M +    P   T N+    L R+  +  A  +  +M   G  P V   +
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231

Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
            LI       K  +A      M+  G  P+ V Y+  + GL    + D A ELFR +   
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291

Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
           GC PD V Y  ++ G C   ++ +A ++F+EM++KG  P V  YN L+ G+ ++G   +A
Sbjct: 292 GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 351

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE-KGCAPNRITFMALI 612
                 M+ +E   PD +++  +IDGL  A R DDA+ ++  ME+  GC+P+ +T+ +LI
Sbjct: 352 RQLFQVMVSREC-KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
            GLC   R   A+  F+ +    + PD   F  L+ A  +  + P 
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHKPF 456



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 161/315 (51%), Gaps = 7/315 (2%)

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF---TLNSMFRCLCRRQDVVGAL 414
           N   +   + GLC S ++E+++E  R M+ES          T +S+ + LC+   V  AL
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC--YSAAIG 472
           +L+  M  +G+ P +  +++LI ELCK  K  EA  FL  M +        C  Y++ + 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 473 GLIDIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            L   K+V  A  +F  + +     PDVV+Y+I+I G CK   +  AE L+ +MI    +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P+V TYN  +NG  + G I  A      M+     SPDVITY+TLI G  +A + D A  
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISA-GCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L+  M  +GC PN +T+  L+ GLCK  +P  A   FR M E+G  PD   +  L+  F 
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 652 SELNPPLAFEVLKEM 666
           +      A EV  EM
Sbjct: 309 NVGKIEQAVEVFDEM 323



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 209/493 (42%), Gaps = 57/493 (11%)

Query: 65  NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY---TLTPLLQVYCNSGQFDKAL 121
           NN ++   L  LCKS  ++      + MQ+           T   ++Q  C +G+ D AL
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 122 SVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV--LIH 178
           S+   +I  G+  D    S+L+    K  ++ +A E ++ M+          F    L++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 179 GFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
              K  +V +A  +F  M ++     D   Y ++I G CK  +L  A +LY +M      
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 238 PDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQ 297
           P+                             V T     N +MR     G I  A  + +
Sbjct: 190 PN-----------------------------VTTYNAFLNGLMR----KGRIADAQGVYE 216

Query: 298 AMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
            MI                    SP+  ++  +I+      K D A  LF  M   GC  
Sbjct: 217 EMISA----------------GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRP 260

Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
           N   YN L+ GLC  ++ +E++EL R+M E G  P   T  ++    C    +  A+ + 
Sbjct: 261 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVF 320

Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
            +M  +GH+P V     L+K   + GK  EA +    MV     PD V ++  I GL   
Sbjct: 321 DEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKA 380

Query: 478 KRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
           KR+D A+E+F  +   HGC PD+V YN +I GLC  QR++EA  +F E+    L P    
Sbjct: 381 KRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHA 440

Query: 537 YNLLINGWCKSGN 549
           +N+L+     +G+
Sbjct: 441 FNVLLEAMYAAGH 453



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 175/340 (51%), Gaps = 4/340 (1%)

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE-- 387
           +I  L K G++D ALSL   M + G   ++  ++ LI+ LC +++++E+ E L+ M    
Sbjct: 55  VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAM 446
           S    + F+ NS+   LC+ + V  A  +   M  +    P V   ++LI   CK  +  
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A +    M+    +P++  Y+A + GL+   R+  A  ++ ++ + GC PDV+ Y+ +I
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
            G   A++  +A +LF  MI++G  P+  TYN L++G CK    D+A     +M+E+   
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER-GC 293

Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
            PD +TYTTL+ G C  G+ + A+ +++EM  KG  P+ + +  L+ G  +  +P  A  
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            F++M  +  KPD      +I           A EV + M
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 164/407 (40%), Gaps = 71/407 (17%)

Query: 24  SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD 83
           S CF    +   L+  L     V +A  +F  +  E   VP+  SY+ L++  CK   + 
Sbjct: 119 SSCF----SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
             E   K+M D     +  T    L      G+   A  V+ E+I  G   D   +S L+
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
             FS   + D+A EL E M     R N  T+  L+HG  K+S+ D+A +LF KM + G  
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKE 262
            D   Y  ++ G C   ++E A++++ EM   G  PD                       
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD----------------------- 331

Query: 263 IWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                      +  N +++     G   +A  L Q M+  E                  P
Sbjct: 332 ----------VVAYNCLLKGFFRAGKPGEARQLFQVMVSRE----------------CKP 365

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           +T S +I+I+ L K  +LD A+ +F  M Q  GC  ++  YN+LI GLC   RL E+ ++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
            +E++     P     N                 L+  M   GH+P+
Sbjct: 426 FKEIDRLKLSPDPHAFNV----------------LLEAMYAAGHKPF 456


>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 696

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 223/500 (44%), Gaps = 80/500 (16%)

Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLV 260
           FA D  +   ++G L +   + ++ +L +E++G G     E++  L+ S    G L    
Sbjct: 114 FARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLG-LARYA 172

Query: 261 KEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
            E++       +   T + N+++   V  G++D AY   Q M      AD          
Sbjct: 173 HEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMP-----AD---------- 217

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
               P+  +++ +++ + + G +D A+ L R+M   G   NVF Y  L+DG CN+ R+EE
Sbjct: 218 -GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEE 276

Query: 378 SYELLREMEESGFKPTHFT----LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
           ++ +L +M+E G  P+  T    ++ +FRCL R +    A  ++          W+ H T
Sbjct: 277 AFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDK----AYRMLSD--------WLGHET 324

Query: 434 LLIKELC--------KHGKAMEAFRFLTDMVQEGFL------------------------ 461
            L    C        K   A EA  F   M   G+L                        
Sbjct: 325 SLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCE 384

Query: 462 -----------PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
                      P    Y   I  L++ K    A      +   G    V++YN++I    
Sbjct: 385 LLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFV 444

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           KA  V +AE++  EM  KG +P++ T+N LI+G+ K GN+  A + L +ML +    PD+
Sbjct: 445 KAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVL-KMLMEHGFMPDI 503

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           IT+T+LIDGLC   + DDA + + EM E G  PN  T+  L+  LC       A+     
Sbjct: 504 ITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNK 563

Query: 631 MKEKGMKPDMFVFVALISAF 650
           MK  G+ PD + F ALI +F
Sbjct: 564 MKIDGVTPDAYSFNALILSF 583



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/554 (23%), Positives = 240/554 (43%), Gaps = 49/554 (8%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+   G +GL   A+ +F Q+ R GL  P+   YN L+ A  ++ +VD   +R ++M   
Sbjct: 159 LVESWGRLGLARYAHEVFVQMPRLGL-RPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKAC 155
           G   D +T   L+   C                                  + G VD+A 
Sbjct: 218 GCRPDHFTYNSLVHGVC----------------------------------RRGIVDEAV 243

Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
            L+ +M+   IR N  T+ +L+ GF    RV++A ++ DKM + G A   A Y  ++ G+
Sbjct: 244 RLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGV 303

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
            +  + + A ++ S+  G   +        ++   S +      V+  +E R      LL
Sbjct: 304 FRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVE--FEKRMSARGYLL 361

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
            ++   I++S              +K   ++D+   +    K   +P    + ++I +LL
Sbjct: 362 DSTAFGIVMS------------CALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLL 409

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
                  A      M   G + +V  YN +ID    +  ++++ E+++EM++ GF P   
Sbjct: 410 NCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLV 469

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N++     +  +V  A  +++ +   G  P +   T LI  LC   +  +AF    +M
Sbjct: 470 TFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEM 529

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            + G  P+   Y+  +  L     V+ A++L   +   G  PD  ++N +I   C+ ++V
Sbjct: 530 AEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKV 589

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +AED+FN+M+  G++P   TYN LI   C    +++A   L         + +  +Y  
Sbjct: 590 DKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWP 649

Query: 576 LIDGLCIAGRPDDA 589
           ++  L   G+  +A
Sbjct: 650 IVAALAKMGQFSEA 663



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 237/493 (48%), Gaps = 27/493 (5%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            G V+ A + F Q+  +G C P++++YN L+  +C+   VD     +++M+  G   + +
Sbjct: 201 AGAVDTAYLRFQQMPADG-CRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVF 259

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T L+  +CN+G+ ++A  + +++ + G    E  +  L+    +  E DKA  ++   
Sbjct: 260 TYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDW 319

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                 L+      +++   KK    +A++   +M+  G+  D+  + +++   C  K L
Sbjct: 320 LGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMS--CALKCL 377

Query: 222 EMA--LQLYSEMKGSGITPDFEILSKLITS---CSDEGELTLLVKEIWEDRDVNTMTLLC 276
           E++   +L      +G  P F++   +I S   C +  +    +  +   + + +  +  
Sbjct: 378 EVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVL-KGLLSSVMSY 436

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           N ++   V  G++D+A  +++ M                 KG + PN  +F+ +I+   K
Sbjct: 437 NMVIDCFVKAGAVDKAEEIVKEMQD---------------KGFL-PNLVTFNTLISGYSK 480

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +  A  + + + + G M ++  + +LIDGLCN+++L++++    EM E G +P   T
Sbjct: 481 LGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQT 540

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
            N +   LC    V  A++L+ KM++ G  P       LI   C+  K  +A     DMV
Sbjct: 541 YNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMV 600

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC-CPDVVAYNIIISGLCKAQRV 515
           + G +PD   Y++ I  L D +RV+ A E+       GC   +  +Y  I++ L K  + 
Sbjct: 601 RFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQF 660

Query: 516 AEAEDLFNEMITK 528
           +EA +L ++ +++
Sbjct: 661 SEAGELMDKYLSR 673



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 220/512 (42%), Gaps = 33/512 (6%)

Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           V E +   L+ ++ + G    A E+  +M    +R +   +  LI   V+   VD A   
Sbjct: 151 VSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLR 210

Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           F +M   G   D   Y+ ++ G+C+   ++ A++L  +M+G GI P+    + L+    +
Sbjct: 211 FQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCN 270

Query: 253 EGELTLL------VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE--- 303
            G +         +KE        T   L + + R L      D+AY +L   +  E   
Sbjct: 271 AGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCL----ERDKAYRMLSDWLGHETSL 326

Query: 304 -PIA----------------DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
            P A                 V  E  M  +G +  ++++F I+++  LK  ++     L
Sbjct: 327 HPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLL-DSTAFGIVMSCALKCLEVSDLCEL 385

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
                + G      +Y  +I  L N     ++   L  M   G   +  + N +  C  +
Sbjct: 386 LDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVK 445

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
              V  A  +V++M+ +G  P +     LI    K G    A   L  +++ GF+PDI+ 
Sbjct: 446 AGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIIT 505

Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
           +++ I GL +  ++D A   F ++   G  P+   YN+++  LC A  V +A DL N+M 
Sbjct: 506 FTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMK 565

Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
             G+ P   ++N LI  +C+   +D+A    + M+ +    PD  TY +LI  LC   R 
Sbjct: 566 IDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMV-RFGVVPDSYTYNSLIKALCDERRV 624

Query: 587 DDAIMLWNEMEEKGCA-PNRITFMALITGLCK 617
           + A  +    E  GC+  N  ++  ++  L K
Sbjct: 625 NKAKEILFARERSGCSTSNNQSYWPIVAALAK 656



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 39/367 (10%)

Query: 338 GKLDLAL---SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           G+L LA     +F +M ++G   +  +YN LI     +  ++ +Y   ++M   G +P H
Sbjct: 164 GRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDH 223

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           FT NS+   +CRR  V  A+ LVR+M  +G  P V   T+L+   C  G+  EAFR L  
Sbjct: 224 FTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDK 283

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH--------------------- 493
           M ++G  P    Y   + G+      D A  +  D   H                     
Sbjct: 284 MKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDM 343

Query: 494 --------------GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
                         G   D  A+ I++S   K   V++  +L +  I  G  P    Y +
Sbjct: 344 AKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIM 403

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
           +I       N  +A   L  M+ K   S  V++Y  +ID    AG  D A  +  EM++K
Sbjct: 404 VIKSLLNCKNFSKANHYLGHMVLKGLLS-SVMSYNMVIDCFVKAGAVDKAEEIVKEMQDK 462

Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
           G  PN +TF  LI+G  K      A V  +M+ E G  PD+  F +LI    +      A
Sbjct: 463 GFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDA 522

Query: 660 FEVLKEM 666
           F   +EM
Sbjct: 523 FVCFEEM 529



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 6/193 (3%)

Query: 393 THFTLNSMFR-----CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
            HF  +   R      L RR  VV +  LV ++R  G E   +    L++   + G A  
Sbjct: 112 AHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARY 171

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A      M + G  P    Y+A I   +    VD A   F+ + A GC PD   YN ++ 
Sbjct: 172 AHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVH 231

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G+C+   V EA  L  +M  +G+ P+V TY +L++G+C +G +++A   L +M EK   +
Sbjct: 232 GVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEK-GVA 290

Query: 568 PDVITYTTLIDGL 580
           P   TY TL+ G+
Sbjct: 291 PSEATYRTLVHGV 303


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 187/362 (51%), Gaps = 5/362 (1%)

Query: 295 LLQAMIKGEPI-ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
           LL  +IK +   A V +  ++  K T+ P+  +F I+IN   + G++  A SL   + ++
Sbjct: 75  LLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKM 134

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +V +   L+ GLC   R+ E+  LL E  + GF+       ++   LC+      A
Sbjct: 135 GFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDA 194

Query: 414 LNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
           + +  KM +++ +   + +NT +I  LCK G   EA    T+MV+ G   D+  Y++ I 
Sbjct: 195 IQMFPKMKKIRVYPNLIMYNT-VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIH 253

Query: 473 GLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           G   + R   A++L  ++   G   PDV  +NI+I GLCK  RV+EA ++   MI +G  
Sbjct: 254 GFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWK 313

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P + +YN L+NG+C SG++ +A     +M+E+ +  P+VI+Y TLI+G C     D+A++
Sbjct: 314 PDIVSYNALMNGYCLSGSVGEAKQVFDKMVER-TALPNVISYCTLINGYCKVRMVDEAMV 372

Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
           L  EM  K   P+ +T+  L+ GL K  R          M+  G   D+  +  L+  + 
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYF 432

Query: 652 SE 653
             
Sbjct: 433 KH 434



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 222/455 (48%), Gaps = 31/455 (6%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSDEGEL----TLL--V 260
           ++ ++  L K K+    + LY+ ++    I P     S LI + +  G++    +LL  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            ++    DV  +T    ++M+ L   G + +A +LL   +      D G     +  GT 
Sbjct: 132 LKMGFQIDVRILT----TLMKGLCLKGRVLEAVSLLHEYV------DRGFRFDEVCYGT- 180

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
                    IIN L K GK   A+ +F +M +I    N+ +YN +IDGLC    ++E+  
Sbjct: 181 ---------IINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACG 231

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKEL 439
           L  EM E+G +   ++ NSM    C       A+ L+ +M V+G   P V    +LI  L
Sbjct: 232 LCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGL 291

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+  EA+  +  M++ G+ PDIV Y+A + G      V  A ++F  +      P+V
Sbjct: 292 CKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNV 351

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           ++Y  +I+G CK + V EA  L  EM  K L+P   TYN L++G  KSG        +  
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411

Query: 560 MLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           M  + SG P D+ITY  L+D      + D A+ L+  + E G +PN  T+  L+ GLCK 
Sbjct: 412 M--RASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS 469

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            R + A   F+++  KG +P++  +  +I     E
Sbjct: 470 GRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKE 504



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 216/479 (45%), Gaps = 51/479 (10%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           FSIL+ AF++ G++  A  L+  +     +++ +    L+ G   K RV +A+ L  +  
Sbjct: 108 FSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYV 167

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
             GF  D   Y  II GLCK  +   A+Q++ +MK   + P+                  
Sbjct: 168 DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNL----------------- 210

Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
                           ++ N+++  L   G +D+A  L   M++       G+E+     
Sbjct: 211 ----------------IMYNTVIDGLCKQGLVDEACGLCTEMVEN------GIEL----- 243

Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLE 376
                +  S++ +I+     G+   A+ L  EM   G    +V+ +N LIDGLC   R+ 
Sbjct: 244 -----DVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVS 298

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+Y ++  M + G+KP   + N++    C    V  A  +  KM  +   P V     LI
Sbjct: 299 EAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLI 358

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
              CK     EA   LT+M  +  +PD V Y+  + GL    R     +L   + A G  
Sbjct: 359 NGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQP 418

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
            D++ YN+++    K ++  +A  LF  +I  G+ P++ TYN+L++G CKSG +  A   
Sbjct: 419 ADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEI 478

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
             ++L  +   P++ TY  +I GLC  G  D+A  L  +M      PN ITF  ++  +
Sbjct: 479 F-QLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 28/447 (6%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
           T + L+  +   GQ   A S+   I+  G+ +D  + + L+      G V +A  L+   
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY 166

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
            D   R +E  +  +I+G  K  +   A+Q+F KM K     +  MY+ +I GLCK   +
Sbjct: 167 VDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTL 274
           + A  L +EM  +GI  D    + +I      G     VK + E         DV T  +
Sbjct: 227 DEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNI 286

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L + + ++    G + +AYN++  MIK               +G   P+  S++ ++N  
Sbjct: 287 LIDGLCKL----GRVSEAYNVVAVMIK---------------RGW-KPDIVSYNALMNGY 326

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
              G +  A  +F +M +   + NV  Y  LI+G C    ++E+  LL EM      P  
Sbjct: 327 CLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT 386

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
            T N +   L +    +   +LV  MR  G    +    +L+ +  KH K  +A      
Sbjct: 387 VTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQH 446

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           +++ G  P+I  Y+  + GL    R+  A E+F+ + A GC P++  YNI+I GLCK   
Sbjct: 447 IIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGF 506

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLI 541
           + EAE L  +M+    +P+  T++ ++
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 29/379 (7%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G +I  L  +G   +A  +F ++K+  +  PN   YN +++ LCK   VD       EM 
Sbjct: 179 GTIINGLCKIGKTRDAIQMFPKMKKIRV-YPNLIMYNTVIDGLCKQGLVDEACGLCTEMV 237

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV--DEHVFSILLVAFSKWGEV 151
           + G   D Y+   ++  +C+ G+F  A+ + +E++  G V  D + F+IL+    K G V
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297

Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
            +A  ++  M     + +  ++  L++G+     V +A Q+FDKM +     +   Y  +
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357

Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG------ELTLLVKEIWE 265
           I G CK + ++ A+ L +EM    + PD    + L+   S  G      +L   ++   +
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
             D+ T  +L +   +    +   D+A  L Q +I      ++G          +SPN  
Sbjct: 418 PADLITYNVLLDDYFK----HEKFDKALALFQHII------EIG----------ISPNIR 457

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           +++I+++ L K G+L  A  +F+ ++  GC  N+  YN +I GLC    L+E+  LL +M
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517

Query: 386 EESGFKPTHFTLNSMFRCL 404
             + + P + T +++ R +
Sbjct: 518 VNNNYLPNYITFDTIVRAI 536



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 29/308 (9%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           +I    SVG  + A  L D++   G   P+ Y++N L++ LCK   V      +  M   
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
           GW  D  +   L+  YC SG   +A  VF+++++   +   + +  L+  + K   VD+A
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             L+  M + N+  +  T+  L+ G  K  R      L + M  SG  +D   Y+V++  
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDD 430

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-------DR 267
             K+++ + AL L+  +   GI+P+    + L+      G L    KEI++         
Sbjct: 431 YFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLK-YAKEIFQLLSAKGCQP 489

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           ++ T  ++ +     L   G +D+A  LL  M+    +                PN  +F
Sbjct: 490 NIRTYNIMIHG----LCKEGFLDEAEALLYKMVNNNYL----------------PNYITF 529

Query: 328 DIIINTLL 335
           D I+  +L
Sbjct: 530 DTIVRAIL 537


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/592 (24%), Positives = 258/592 (43%), Gaps = 68/592 (11%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
            GL+  A  LF  +   G CV   ++Y  LL  LC +  V         MQ  G   D +
Sbjct: 120 AGLLAHACRLFVLMPLRG-CVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPH 178

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERM 161
               ++   C +G+  +A ++ ++ +  G+  +  V++ L+  +   G+++ A ++ ERM
Sbjct: 179 VYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM 238

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           D      N +T+  LI GF K  ++D+A+ LF +M  +G   +   Y  +I G C + QL
Sbjct: 239 DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQL 298

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
           + A +L   M+ SG                       LV   W           C+ ++ 
Sbjct: 299 DCAYRLLQSMENSG-----------------------LVPNEWT----------CSVLID 325

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L  +  + +A  LL ++I+               KG +  N   +  +I+ L K G+  
Sbjct: 326 ALCKHERVGEAQLLLGSLIQ---------------KG-IKVNEIVYTSLIDGLCKAGRFA 369

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
            A  L + +   G + +   Y++LIDGLC    L E+  +L +M E G +P+  T   + 
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
             L R     G+  ++ KM   G +P V   T+ ++  C  G+  +A   +  MV  G  
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVC 489

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ-------- 513
           P++V Y+A I G  ++     A   F+ + A+GC P+  +Y +++  L K +        
Sbjct: 490 PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPAN 549

Query: 514 -----RVAEAE---DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
                ++AE +    L  EM+   L   +  YN  +   C+   +D+A + L  M +  +
Sbjct: 550 SVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM-QSAN 608

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
            +P    YT++I   C      +A+   + M + G  P   ++  +I+ LC+
Sbjct: 609 LTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCE 660



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/618 (24%), Positives = 251/618 (40%), Gaps = 71/618 (11%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERM 161
           T T L+  YC +G    +    + ++  G+  D H ++  +V + + G +  AC L   M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
                     T+  L+HG      V +A+ +F  M   G A D  +Y  ++ GLC   + 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             A  L S+    G  P+  + + LI    + G+L L V +++E  DVN     C+  +R
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAV-DVFERMDVNG----CSPNVR 248

Query: 282 I---LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
               L+S     ++  L +AM+    + D G+           PN  ++  +I     DG
Sbjct: 249 TYTELISG--FCKSRKLDRAMMLFSRMVDAGL----------VPNVVTYTALIQGQCSDG 296

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           +LD A  L + M   G + N +  + LID LC   R+ E+  LL  + + G K       
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYT 356

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
           S+   LC+      A  L++ +  QG  P     + LI  LC+  +  EA   L DM+++
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416

Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
           G  P  V Y+  I  L+     D + ++   + A G  PDV  Y I +   C   R+ +A
Sbjct: 417 GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDA 476

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM------------------ 560
           E +   M+  G+ P++ TYN LI G+   G   QA      M                  
Sbjct: 477 EHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRL 536

Query: 561 -LEKESGS-------------------------------PDVITYTTLIDGLCIAGRPDD 588
            ++KES +                                ++  Y   +  LC   R D+
Sbjct: 537 LIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDE 596

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A +L  EM+     P+   + ++I   C+      AL     M + G  P +  +  +IS
Sbjct: 597 AKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIIS 656

Query: 649 AFLSELNPPLAFEVLKEM 666
           +   E +   A +V  +M
Sbjct: 657 SLCEEGSIQTAKQVFGDM 674



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 166/347 (47%), Gaps = 7/347 (2%)

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N  ++  +IN     G L  +      + + G   +   Y + + G C +  L  +  L 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
             M   G   T FT  ++   LC    V  A+++   M+  G  P       ++  LC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G+  EA   L+D + EGF P++V Y+A I G  ++  ++LA+++F  +  +GC P+V  Y
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             +ISG CK++++  A  LF+ M+  GL+P+V TY  LI G C  G +D    C  R+L+
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD----CAYRLLQ 306

Query: 563 KESGS---PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
               S   P+  T + LID LC   R  +A +L   + +KG   N I + +LI GLCK  
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           R  AA    + +  +G  PD   + +LI     +     A  VL +M
Sbjct: 367 RFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 203/513 (39%), Gaps = 83/513 (16%)

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N +T+  LI+ +     +  + +    + ++GFA D+  Y   + G C+   L  A +L+
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
             M   G                               R   T T L +     L   G 
Sbjct: 131 VLMPLRGCV-----------------------------RTAFTYTALLHG----LCGAGM 157

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           + +A ++   M      AD             +P+   +  +++ L   G+   A +L  
Sbjct: 158 VREAMSVFAGMQ-----AD-----------GCAPDPHVYATMVHGLCGAGRTREAETLLS 201

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           +    G   NV +YN LIDG CN   LE + ++   M+ +G  P   T   +    C+ +
Sbjct: 202 DAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSR 261

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
            +  A+ L  +M   G  P V   T LI+  C  G+   A+R L  M   G +P+    S
Sbjct: 262 KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I  L   +RV  A  L   +   G   + + Y  +I GLCKA R A A+ L   ++++
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK------------------ESGS--- 567
           G +P   TY+ LI+G C+   + +AML L  M+EK                  E G+   
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441

Query: 568 -------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
                        PDV TYT  +   C  GR +DA  +   M + G  PN +T+ ALI G
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
                    A   F+ M   G KP+   +  L+
Sbjct: 502 YANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 229/493 (46%), Gaps = 33/493 (6%)

Query: 100 DKYTLTPLLQVYCNSGQ-FDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELI 158
           D  +   +L   C  G   D AL +   +          ++ L+ A        +A  L+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M    +R +  T+  LI G    + VDKA++L  +M +SG   +  +Y  ++ G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWE---DRDVNTM 272
            + E   +++ EM G GI PD  + + LI S   EG++   T ++ ++ E   + +V T 
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEML------------------ 313
            +L NS+ +     GS+ +A +L   M+ KG  +  V    L                  
Sbjct: 257 NVLINSMCK----EGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 314 -MIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
            MI   T V PN  +F+ +I+ L K G++  A  +   M + GC  N+  +N LI GL  
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
            ++++++ EL+ EM  SG +P  FT + +    C+   V  A +L+ KMR  G EP + H
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
              L+  LC+ G   +A  F  +M +   L D+V YS  I G   ++    A E  + + 
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHML 491

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G  PD V Y+++I+    +  +  AE +  +M   G +P VA ++ LI G+   G+ +
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551

Query: 552 QAMLCLSRMLEKE 564
           + +  +  M  K+
Sbjct: 552 KVLELIREMTAKD 564



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 233/537 (43%), Gaps = 57/537 (10%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
           D   ++ +L A  + G    A   + R+     R    ++  L+     + R  +A+ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
             M  SG   D   Y  +I GLC    ++ A++L  EM  SGI P+  + S L+      
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 254 GELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           G    + K  E    R +    ++   ++  L   G + +A  ++  M+      + G+E
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMM------ERGLE 250

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                     PN  +++++IN++ K+G +  A+SL   M + G   +   YN LI GL  
Sbjct: 251 ----------PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSG 300

Query: 372 SNRLEESYELLREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
              ++E+  LL EM   E+  +P   T NS                              
Sbjct: 301 VLEMDEAMGLLEEMIHGETMVEPNVVTFNS------------------------------ 330

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
                +I  LCK G+  +AF+    M + G   ++V ++  IGGL+ + +V  A+EL  +
Sbjct: 331 -----VIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDE 385

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           + + G  PD   Y+I+I+G CK  +V  AE L ++M   G+ P +  Y  L+   C+ G 
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGM 445

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           ++QA      M   ++   DV+ Y+T+I G C       A      M ++G  P+ +T+ 
Sbjct: 446 MEQARNFFDEM--HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYS 503

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI          AA    + M   G  PD+ VF +LI  + ++ +     E+++EM
Sbjct: 504 MLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 219/504 (43%), Gaps = 53/504 (10%)

Query: 63  VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
           V +  SYN +L ALC+        + L  +  +       + T L++  C   +  +A+ 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
           +  ++   G   + V +  L+       +VDKA EL+  M +  I  N   +  L+ G+ 
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  R +   ++F++M+  G   D  MY  +I  LC+  +++ A Q+  +M   G+ P+  
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 242 ILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
             + LI S   EG +   + ++    ++ V    +  N+++  L     +D+A  LL+ M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           I GE +              V PN  +F+ +I+ L K G++  A  +   M + GC  N+
Sbjct: 315 IHGETM--------------VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNL 360

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             +N LI GL   ++++++ EL+ EM  SG +P  FT + +    C+   V  A +L+ K
Sbjct: 361 VTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFR----------------------------- 450
           MR  G EP + H   L+  LC+ G  ME  R                             
Sbjct: 421 MRRDGIEPELVHYIPLLAALCEQG-MMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRD 479

Query: 451 ------FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
                 FL  M+ EG +PD V YS  I    +   +  A  + + + A G  PDV  ++ 
Sbjct: 480 RKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDS 539

Query: 505 IISGLCKAQRVAEAEDLFNEMITK 528
           +I G        +  +L  EM  K
Sbjct: 540 LIKGYGAKGDTEKVLELIREMTAK 563



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 161/320 (50%), Gaps = 5/320 (1%)

Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNR-LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
           ++ +  +++   YN ++  LC     L+ +  LLR M     +PT  +  ++ R LC  +
Sbjct: 69  LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAER 127

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
               A+ L+R M+  G  P V     LI+ LC      +A   L +M + G  P++V YS
Sbjct: 128 RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYS 187

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             + G     R +   ++F ++   G  PDVV Y  +I  LC+  +V +A  + ++M+ +
Sbjct: 188 CLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           GL P+V TYN+LIN  CK G++ +AM   + MLEK   + D +TY TLI GL      D+
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK-GVALDAVTYNTLITGLSGVLEMDE 306

Query: 589 AIMLWNEM--EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           A+ L  EM   E    PN +TF ++I GLCK  R R A     MM E G   ++  F  L
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366

Query: 647 ISAFLSELNPPLAFEVLKEM 666
           I   L       A E++ EM
Sbjct: 367 IGGLLRVHKVKKAMELMDEM 386



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 36/382 (9%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           +F+++   G+  P+   Y  L+++LC+   V      + +M + G   +  T   L+   
Sbjct: 205 VFEEMSGRGI-EPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263

Query: 112 CNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM--DDCNIRL 168
           C  G   +A+S+ N +++ G  +D   ++ L+   S   E+D+A  L+E M   +  +  
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP 323

Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
           N  TF  +IHG  K  R+ +A Q+ D M ++G A +   ++++IGGL +  +++ A++L 
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELM 383

Query: 229 SEMKGSGITPDFEILSKLITS-CS----DEGE--LTLLVKEIWEDRDVNTMTLLCNSIMR 281
            EM  SG+ PD    S LI   C     D  E  L+ + ++  E   V+ + LL      
Sbjct: 384 DEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLA----- 438

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-------------------MIFKGTVSP 322
            L   G ++QA N    M K   +  V    +                   M+ +G + P
Sbjct: 439 ALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLI-P 497

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           ++ ++ ++IN     G L  A  + ++MT  G + +V ++++LI G       E+  EL+
Sbjct: 498 DSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557

Query: 383 REMEESGFKPTHFTLNSMFRCL 404
           REM           +++++ CL
Sbjct: 558 REMTAKDIALDSKIISTIYTCL 579



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 1/214 (0%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
            LI  L  V  V++A  L D++   GL  P++++Y+ L+   CK   VD  E  L +M+ 
Sbjct: 365 LLIGGLLRVHKVKKAMELMDEMASSGL-EPDSFTYSILINGFCKMWQVDRAESLLSKMRR 423

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKA 154
            G   +     PLL   C  G  ++A + F+E+  +  +D   +S ++    +  +   A
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSA 483

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
            E ++ M D  +  +  T+ +LI+ F     +  A ++  +MT SGF  D A++D +I G
Sbjct: 484 EEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKG 543

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
                  E  L+L  EM    I  D +I+S + T
Sbjct: 544 YGAKGDTEKVLELIREMTAKDIALDSKIISTIYT 577


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 242/543 (44%), Gaps = 34/543 (6%)

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELI------ERMDDCNIRLNEK---- 171
           ++ + + D G +D+ V ++  V   +     + C  I      ER  +   RL E+    
Sbjct: 133 TLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP 192

Query: 172 ---TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
              TF ++I    K+  + +A  L  +M   G + D   Y+ +I G  K  +LE   +L 
Sbjct: 193 NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252

Query: 229 SEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSN 286
            EM+G G  PD    + L+      G +        E +    M   +  ++ +     N
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312

Query: 287 GSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
           G + +A  L   M +KG                 + PN  ++  +++   K G+LD AL 
Sbjct: 313 GMVREAMKLFAQMRMKG-----------------MKPNEVTYTCLVDGTCKAGRLDDALV 355

Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
           L  EM Q G   NV  Y  L+DGLC   ++ E+ ++ R ME +G +       ++     
Sbjct: 356 LTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415

Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
             ++   AL+L+ +M+ +G E  V     LI  LC   K  EA   L  M + G  P+ V
Sbjct: 416 VYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNV 475

Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
            Y+  +      ++   A+ L + +   G  P++V Y  ++ GLCKA  + EA   FN+M
Sbjct: 476 IYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKM 535

Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
           +  GL P+V  Y  L++G CK+G +D+A+L L  M++K   S D +  T+L+DG    G 
Sbjct: 536 VDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDK-GMSLDNVVCTSLMDGHLKQGN 594

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
             DA  L  +M   G   +   +   + G C  +  + A      M E G+ PD  V+  
Sbjct: 595 LQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNC 654

Query: 646 LIS 648
           LI+
Sbjct: 655 LIN 657



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 191/421 (45%), Gaps = 69/421 (16%)

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           +F+   +PN  +F+I+I+ L K+G L  A +L   M  IGC  +V  YN+LIDG      
Sbjct: 185 LFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGE 244

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           LEE  +L+ EM   G +P   T N++  C C+   +  A +   +M+ +G    V   + 
Sbjct: 245 LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFST 304

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            +   CK+G   EA +    M  +G  P+ V Y+  + G     R+D AL L  ++   G
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLF-------------------------------- 522
              +VV Y +++ GLCK  +VAEAED+F                                
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL 424

Query: 523 ---NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE----------------- 562
              +EM  KG+   V+ Y  LI G C    +D+A   L++M E                 
Sbjct: 425 SLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDAC 484

Query: 563 ----KESGS-------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
               KES +             P+++TY  L+DGLC AG  D+AI  +N+M + G  PN 
Sbjct: 485 FKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNV 544

Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
             + AL+ GLCK  R   A++    M +KGM  D  V  +L+   L + N   AF +  +
Sbjct: 545 QAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAK 604

Query: 666 M 666
           M
Sbjct: 605 M 605



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 246/536 (45%), Gaps = 55/536 (10%)

Query: 29  SPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVE 86
           +P    F  +I  L   G + EA  L  ++K  G C P+  +YN L++   K   ++ VE
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIG-CSPDVVTYNSLIDGYGKCGELEEVE 249

Query: 87  MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAF 145
             + EM+  G   D  T   L+  +C  G+ ++A S F E+   G +   V FS  + AF
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G V +A +L  +M    ++ NE T+  L+ G  K  R+D AL L ++M + G   + 
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNV 369

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             Y V++ GLCK  ++  A  ++  M+ +GI  +  + + LI      G        +++
Sbjct: 370 VTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI-----HGHF------VYK 418

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
           + +                      +A +LL  M       D G+E+          + S
Sbjct: 419 NSE----------------------RALSLLSEM------KDKGMEL----------DVS 440

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            +  +I  L    KLD A SL  +M + G   N  +Y N++D    + +  E+  LL++M
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
            +SGF+P   T  ++   LC+   +  A++   KM   G EP V+  T L+  LCK+G+ 
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560

Query: 446 MEAFRFLTDMVQEGF-LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
            +A   L +M+ +G  L ++VC S   G L      D A  L   +   G   D+  Y  
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD-AFALKAKMINSGLQLDLYGYTC 619

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            + G C    + EA ++ +EMI  G+ P    YN LIN   K GN+++A +  + M
Sbjct: 620 FVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 259/575 (45%), Gaps = 33/575 (5%)

Query: 30  PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRL 89
           P  +  L+  L   GL+++A +   +V RE    PN  + N +L  L +  S +L     
Sbjct: 128 PSVVDTLLSLLADRGLLDDAVLALARV-RELRVPPNTRTCNHILLCLARERSSELAWRLF 186

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKW 148
           +++       + +T   ++   C  G   +A ++   +   G   + V ++ L+  + K 
Sbjct: 187 EQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKC 242

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GE+++  +L+  M  C  R +  T+  L++ F K  R+++A   F +M + G  ++   +
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTF 302

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWE 265
              +   CKN  +  A++L+++M+  G+ P+    + L+      G L    +L  E+ +
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362

Query: 266 DR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSP 322
                +V T T+L +     L   G + +A ++ + M +    A+  +   +I    V  
Sbjct: 363 QGVPLNVVTYTVLVDG----LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 323 NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL 382
           N+                + ALSL  EM   G   +V LY  LI GLCN  +L+E+  LL
Sbjct: 419 NS----------------ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462

Query: 383 REMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKH 442
            +M+E G KP +    ++     + +    A+ L++KM   G  P +     L+  LCK 
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522

Query: 443 GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY 502
           G   EA      MV  G  P++  Y+A + GL    R+D A+ L  ++   G   D V  
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC 582

Query: 503 NIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
             ++ G  K   + +A  L  +MI  GL   +  Y   + G+C    I +A   LS M+E
Sbjct: 583 TSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIE 642

Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
               +PD + Y  LI+     G  ++A +L NEME
Sbjct: 643 N-GITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 5/304 (1%)

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
           + L+  L +   L+++   L  + E    P   T N +  CL R +    A  L  ++  
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA 191

Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
               P V    ++I  LCK G   EA   L  M   G  PD+V Y++ I G      ++ 
Sbjct: 192 ----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247

Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
             +L  ++   GC PDVV YN +++  CK  R+  A   F EM  +G++ +V T++  ++
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307

Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
            +CK+G + +AM   ++M  K    P+ +TYT L+DG C AGR DDA++L NEM ++G  
Sbjct: 308 AFCKNGMVREAMKLFAQMRMK-GMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366

Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
            N +T+  L+ GLCK  +   A   FR+M+  G++ +  ++  LI       N   A  +
Sbjct: 367 LNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSL 426

Query: 663 LKEM 666
           L EM
Sbjct: 427 LSEM 430



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 160/369 (43%), Gaps = 62/369 (16%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
           G+V EA  LF Q++ +G+  PN  +Y CL++  CK+  +D   +   EM   G   +  T
Sbjct: 313 GMVREAMKLFAQMRMKGM-KPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 104 LTPLLQVYCNSGQF-----------------------------------DKALSVFNEII 128
            T L+   C  G+                                    ++ALS+ +E+ 
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
           D G  +D  ++  L+       ++D+A  L+ +MD+C ++ N   +  ++    K  +  
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +A+ L  KM  SGF  +   Y  ++ GLCK   ++ A+  +++M   G+ P+ +  + L+
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 248 TSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
                 G L    LL+ E+  D+ ++   ++C S+M   +  G++  A+ L   MI    
Sbjct: 552 DGLCKNGRLDKAVLLLDEMI-DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610

Query: 305 IADV------------------GVEML--MIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
             D+                    E+L  MI  G ++P+   ++ +IN   K G ++ A 
Sbjct: 611 QLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG-ITPDAVVYNCLINKCQKLGNMEEAA 669

Query: 345 SLFREMTQI 353
            L  EM  +
Sbjct: 670 ILQNEMESL 678


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 22/380 (5%)

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L N +MR LV  G +  A N+   M         GV   ++          SF+ +I+ +
Sbjct: 118 LFNVLMRDLVRLGELASAQNVFDEM------QSRGVRRTVV----------SFNTMISGM 161

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            + G LD A +L R M++ G   +V+ Y  LI GLC   R+E++  +  +M   G KP  
Sbjct: 162 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 221

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
                +    C++ D    L L R+MR +G  P       ++  LC+      A   + +
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M   G  PD V Y+  I G    + +D+A+E+ +++ A G   D V Y  +ISGL KA R
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
            A+AE +  EM+  GL P   TY ++I+ +C+ G++   +  L  M + +   P V+TY 
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM-QNKGRKPGVVTYN 400

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE- 633
            +++G C  G+  +A ML N M   G +P+ IT+  L+ G CK       +     +K  
Sbjct: 401 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK----HGKVTDIEELKSA 456

Query: 634 KGMKPDMFVFVALISAFLSE 653
           KG  PD+ V+ +++   + +
Sbjct: 457 KGTVPDLGVYTSIVGEIVKK 476



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 187/433 (43%), Gaps = 53/433 (12%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            S++    +AC    ++ D  +    K F VL+   V+   +  A  +FD+M   G    
Sbjct: 91  MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRT 150

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
              ++ +I G+C+   L+ A  L+  M  +G+TPD      LI                 
Sbjct: 151 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQG--------------- 195

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
                     LC          G I+ A  + + M                 +G + PN 
Sbjct: 196 ----------LCRV--------GRIEDARGVFEKMCG---------------RG-MKPNA 221

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
             F I+I+   K G  +  L L REM + G   +   YN +++GLC +  L+ +  ++ E
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
           M  +G +P   T  ++    C+ +++  A+ + + M  +G        T LI  L K G+
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           + +A R L +M++ G  PD   Y+  I        V   L L +++   G  P VV YN+
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 401

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           I++G CK  ++  A+ L N MI  G+ P   TYN+L++G CK G +      +  +   +
Sbjct: 402 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD----IEELKSAK 457

Query: 565 SGSPDVITYTTLI 577
              PD+  YT+++
Sbjct: 458 GTVPDLGVYTSIV 470



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 147/308 (47%), Gaps = 1/308 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A + + ++   G      L+N L+  L     L  +  +  EM+  G + T  + N+M  
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            +CR  D+ GA  L R+M   G  P V     LI+ LC+ G+  +A      M   G  P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + V ++  I         +  LEL R++   G  PD V YN I++GLC+A+ +  A  + 
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            EM + GL P   TY  LI+G+CK   +D AM     M+ +  G  D +TYT LI GL  
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL-DEVTYTALISGLSK 338

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
           AGR  DA  +  EM E G  P+  T+  +I   C+    +  L   + M+ KG KP +  
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398

Query: 643 FVALISAF 650
           +  +++ F
Sbjct: 399 YNVIMNGF 406



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 3/281 (1%)

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           ++G  P     N + R L R  ++  A N+  +M+ +G    V     +I  +C+ G   
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A      M + G  PD+  Y A I GL  + R++ A  +F  +C  G  P+ V + I+I
Sbjct: 169 GAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
              CK        +L  EM  +G+ P   TYN ++NG C++ ++  A   +  M  + +G
Sbjct: 229 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM--RSAG 286

Query: 567 -SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             PD +TYTTLIDG C     D A+ +   M  +G   + +T+ ALI+GL K  R   A 
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                M E G++PD   +  +I AF  + +      +LKEM
Sbjct: 347 RVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 387



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 1/222 (0%)

Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
           A EA  F   ++  G  P+   ++  +  L+ +  +  A  +F ++ + G    VV++N 
Sbjct: 97  APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156

Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
           +ISG+C+A  +  AE L   M   G+ P V TY  LI G C+ G I+ A     +M  + 
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR- 215

Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
              P+ + +T LID  C  G  +  + L  EM E+G  P+ +T+ A++ GLC+    ++A
Sbjct: 216 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275

Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
                 M+  G++PD   +  LI  +  E    +A E+ + M
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/435 (21%), Positives = 176/435 (40%), Gaps = 60/435 (13%)

Query: 48  EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
           EA   + Q+   GL  P    +N L+  L +   +   +    EMQ  G      +   +
Sbjct: 99  EACAFYLQLLDAGL-PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTM 157

Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
           +   C +G  D A ++   + + G   D + +  L+    + G ++ A  + E+M    +
Sbjct: 158 ISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGM 217

Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
           + N   F +LI    KK   +  L+L  +M + G   DA  Y+ I+ GLC+ + L+ A  
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277

Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
           +  EM+ +G+ PD    + LI     E EL + ++                 I + +V+ 
Sbjct: 278 IVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME-----------------IKQNMVAE 320

Query: 287 G-SIDQA--YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
           G  +D+     L+  + K    AD    +  + +  + P+ +++ ++I+   + G +   
Sbjct: 321 GVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 380

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           L L +EM   G    V  YN +++G C   +++ +  LL  M   G  P   T N +   
Sbjct: 381 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL-- 438

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
                               GH              CKHGK  +     +    +G +PD
Sbjct: 439 -------------------DGH--------------CKHGKVTDIEELKS---AKGTVPD 462

Query: 464 IVCYSAAIGGLIDIK 478
           +  Y++ +G ++  K
Sbjct: 463 LGVYTSIVGEIVKKK 477



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           M P A+ F  LI      G  E    L  +++  G+  P+  +YN ++  LC++  +   
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV-RPDAVTYNAIVNGLCRARDLKSA 275

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
              + EM+  G   D  T T L+  YC   + D A+ +   ++  G  +DE  ++ L+  
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
            SK G    A  ++  M +  +  +  T+ ++I  F +K  V   L+L  +M   G    
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395

Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
              Y+VI+ G CK  Q++ A  L + M   G++PD    + L+      G++T
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVT 448


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 246/554 (44%), Gaps = 63/554 (11%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKW-GEVDKAC--ELIERMDD 163
           LL  Y  +G+FD  +  F+E++  G  +        V ++++ G + K C  +L+E+  D
Sbjct: 164 LLSGYVRAGKFDSVIETFDEMVMSGCRE------FGVDYNRYIGVLVKNCCFDLVEKYYD 217

Query: 164 CNIR----LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
             +     L   T+   I    + +R++   +L   M K G + D    ++ I  LCK  
Sbjct: 218 MALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQN 277

Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
           +L  ALQ+  +M+  G +PD      +++   D                           
Sbjct: 278 RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCD--------------------------- 310

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
                 N    +A  L + M+K +                + P+  S   +I  L K+ K
Sbjct: 311 ------NKKFAEAIGLWEEMVKRD----------------LKPDVFSCGALIFGLCKNNK 348

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
           +D A  L   M  +    +V +YN LI G   +  ++++Y+++  M  +G +P   T N 
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +    C    +  A  L+RKM   G  P       L+K LCK  +  +AF F++D ++ G
Sbjct: 409 LLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVG 468

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              D V  +  I      K+V  ALELF+++   G   D V Y  +I+GL        AE
Sbjct: 469 GFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAE 528

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
           +LF +M+   + P+V  YN++++  CK G+  +A    S M++KE  SPD +T+ TLI  
Sbjct: 529 ELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEV-SPDTVTFNTLIYW 587

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
           L    R  +A+ L+ +M  +G  P+ +TF  LI+GL    +   A   +  M E G+  D
Sbjct: 588 LGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILD 647

Query: 640 MFVFVALISAFLSE 653
             V   LIS   S+
Sbjct: 648 REVSERLISVLKSK 661



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 227/564 (40%), Gaps = 87/564 (15%)

Query: 53  FDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYC 112
           FD++   G C      YN  +  L K+C  DLVE              KY    L + +C
Sbjct: 181 FDEMVMSG-CREFGVDYNRYIGVLVKNCCFDLVE--------------KYYDMALAKGFC 225

Query: 113 NSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
                   L+ F             +S  + A  +   ++   EL+  MD      +   
Sbjct: 226 --------LTPF------------TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWA 265

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
             + I+   K++R+  ALQ+ +KM   G + D   Y  ++ GLC NK+   A+ L+ EM 
Sbjct: 266 CNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMV 325

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
              + PD                                    C +++  L  N  +D+A
Sbjct: 326 KRDLKPD---------------------------------VFSCGALIFGLCKNNKVDEA 352

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           + L   M+       + +E+          +   ++ +I+   + G +D A  +   M  
Sbjct: 353 FELASRMLT------LDIEL----------SVCIYNALISGFWRAGSIDKAYKIISFMRT 396

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            GC  ++  YN L++  C    +E++ +L+R+ME SG  P  ++ N + + LC+   +  
Sbjct: 397 NGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDK 456

Query: 413 ALNLVR-KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
           A   V   M V G    V  N +LI   CK  K   A     +M  +G   D V Y   I
Sbjct: 457 AFAFVSDHMEVGGFCDTVSCN-ILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLI 515

Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
            GL  +   +LA ELF  +      P+V  YNI++  LCK      A+ +F+ MI K + 
Sbjct: 516 NGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVS 575

Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
           P   T+N LI    K     +A L L + +      PD +T+  LI GL   G+   A  
Sbjct: 576 PDTVTFNTLIYWLGKRSRAIEA-LNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYE 634

Query: 592 LWNEMEEKGCAPNRITFMALITGL 615
           +W  M E G   +R     LI+ L
Sbjct: 635 VWEYMMENGIILDREVSERLISVL 658



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 165/392 (42%), Gaps = 42/392 (10%)

Query: 7   RARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN 66
           R +  +P  V  Q VV   C     A         ++GL EE       VKR+    P+ 
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFA--------EAIGLWEE------MVKRD--LKPDV 333

Query: 67  YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
           +S   L+  LCK+  VD        M              L+  +  +G  DKA  + + 
Sbjct: 334 FSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISF 393

Query: 127 IIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
           +  +G   + V ++ILL  +   G ++KA +LI +M+   +  +  ++  L+ G  K  +
Sbjct: 394 MRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQ 453

Query: 186 VDKALQLF-DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
           +DKA     D M   GF  D    +++I   CK K+++ AL+L+ EM   G+  D     
Sbjct: 454 LDKAFAFVSDHMEVGGFC-DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYG 512

Query: 245 KLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
            LI      G   L  +E++E   +  ++    L N ++  L   G   +A  +   MI+
Sbjct: 513 TLINGLFSVGYYNL-AEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQ 571

Query: 302 GEPIADV---------------GVEMLMIFKGT----VSPNTSSFDIIINTLLKDGKLDL 342
            E   D                 +E L +FK      V P+T +F  +I+ LL +GK  L
Sbjct: 572 KEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTL 631

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
           A  ++  M + G + +  +   LI  L + N+
Sbjct: 632 AYEVWEYMMENGIILDREVSERLISVLKSKNK 663



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 36/251 (14%)

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG---------------- 494
           FL  +  +G       Y   + G +   + D  +E F ++   G                
Sbjct: 145 FLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLV 204

Query: 495 --CCPDVV-----------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
             CC D+V                  Y+  IS LC++ R+   ++L  +M   G  P + 
Sbjct: 205 KNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIW 264

Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
             N+ I   CK   +  A+  + +M  K + SPDV+TY T++ GLC   +  +AI LW E
Sbjct: 265 ACNIYIYYLCKQNRLPDALQMVEKMRTKGT-SPDVVTYQTVVSGLCDNKKFAEAIGLWEE 323

Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
           M ++   P+  +  ALI GLCK ++   A      M    ++  + ++ ALIS F    +
Sbjct: 324 MVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGS 383

Query: 656 PPLAFEVLKEM 666
              A++++  M
Sbjct: 384 IDKAYKIISFM 394


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 264/566 (46%), Gaps = 50/566 (8%)

Query: 108 LQVYCNSGQFDKALSVFNEII----DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDD 163
           L  Y + G+   AL +F ++I        +  +   I LV +     +  A E+ + M  
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197

Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM-TKSGFASDAAMYDVIIGGLCKNKQLE 222
             + LN +TF VL++G+  + +++ AL + ++M ++     D   Y+ I+  + K  +L 
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257

Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC--NSIM 280
              +L  +MK +G+ P+    + L+      G L    + +   +  N +  LC  N ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317

Query: 281 RILVSNGSIDQAYNLLQAM--IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
             L + GS+ +   L+ AM  +K +P                       D++    L DG
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQP-----------------------DVVTYNTLIDG 354

Query: 339 KLDLALSL-----FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM-EESGFKP 392
             +L LSL       +M   G   N   +N  +  LC   + E     ++E+ +  GF P
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414

Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL----LIKELCKHGKAMEA 448
              T +++ +   +  D+ GAL ++R+M  +G    +K NT+    ++  LCK  K  EA
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKG----IKMNTITLNTILDALCKERKLDEA 470

Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
              L    + GF+ D V Y   I G    ++V+ ALE++ ++      P V  +N +I G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
           LC   +   A + F+E+   GL+P  +T+N +I G+CK G +++A    +  + K S  P
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI-KHSFKP 589

Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           D  T   L++GLC  G  + A+  +N + EE+    + +T+  +I+  CK  + + A   
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDL 647

Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
              M+EKG++PD F + + IS  + +
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMED 673



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 240/586 (40%), Gaps = 80/586 (13%)

Query: 64  PNNYSYNCLLEALCK---SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
           PN  + N LL  L +   S S+        +M   G   +  T   L+  YC  G+ + A
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223

Query: 121 LSVFNEIIDHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
           L +   ++    V  D   ++ +L A SK G +    EL+  M    +  N  T+  L++
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283

Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
           G+ K   + +A Q+ + M ++    D   Y+++I GLC    +   L+L   MK   + P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343

Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL-LQ 297
           D    + LI  C + G L+L  +++ E  + + +    N +             +N+ L+
Sbjct: 344 DVVTYNTLIDGCFELG-LSLEARKLMEQMENDGVK--ANQV------------THNISLK 388

Query: 298 AMIKGEPIADV--GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
            + K E    V   V+ L+   G  SP+  ++  +I   LK G L  AL + REM Q G 
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHG-FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
             N    N ++D LC   +L+E++ LL    + GF     T  ++     R + V  AL 
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507

Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
           +  +M+     P V     LI  LC HGK   A     ++ + G LPD   +++ I G  
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567

Query: 476 DIKRVDLALELFRDICAHGCCPD----------------------------------VVA 501
              RV+ A E + +   H   PD                                   V 
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT 627

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           YN +IS  CK +++ EA DL +EM  KGL P   TYN  I+   + G + +    L +  
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687

Query: 562 ----------------------EKESGSPDVITYTTLIDGLCIAGR 585
                                  KE  + + I Y+ +ID LC  GR
Sbjct: 688 GKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGR 733



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 243/539 (45%), Gaps = 29/539 (5%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR---VDKALQLF 193
           +F I L A+   G+   A ++ ++M    ++ N  T   L+ G V+      +  A ++F
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSD 252
           D M K G + +   ++V++ G C   +LE AL +   M     + PD    + ++ + S 
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252

Query: 253 EGELTLLVKEIWEDRDVNTMT---LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
           +G L+ L KE+  D   N +    +  N+++      GS+ +A+ +++ M +        
Sbjct: 253 KGRLSDL-KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT------- 304

Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
                     V P+  +++I+IN L   G +   L L   M  +    +V  YN LIDG 
Sbjct: 305 ---------NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM-RVQGHEPW 428
                  E+ +L+ +ME  G K    T N   + LC+ +        V+++  + G  P 
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           +     LIK   K G    A   + +M Q+G   + +  +  +  L   +++D A  L  
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
                G   D V Y  +I G  + ++V +A ++++EM    + P+V+T+N LI G C  G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535

Query: 549 NIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
             + AM     +   ESG  PD  T+ ++I G C  GR + A   +NE  +    P+  T
Sbjct: 536 KTELAMEKFDEL--AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              L+ GLCK      AL  F  + E+  + D   +  +ISAF  +     A+++L EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 232/502 (46%), Gaps = 26/502 (5%)

Query: 11  IAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYN 70
           I+  R +  D+VK    ++      L+      G +E+A  + +++  E    P+N +YN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 71  CLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDH 130
            +L+A+ K   +  ++  L +M+  G   ++ T   L+  YC  G   +A  +  E++  
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQ 303

Query: 131 GWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
             V  D   ++IL+      G + +  EL++ M    ++ +  T+  LI G  +     +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILSKLI 247
           A +L ++M   G  ++   +++ +  LCK ++ E   +   E+    G +PD      LI
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 248 TSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
            +    G+L+  ++ + E   + +   T+  N+I+  L     +D+A+NLL +  K   I
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 306 AD---VGVEMLMIF----------------KGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
            D    G  ++  F                K  ++P  S+F+ +I  L   GK +LA+  
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
           F E+ + G + +   +N++I G C   R+E+++E   E  +  FKP ++T N +   LC+
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603

Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
                 ALN    +  +     V +NT +I   CK  K  EA+  L++M ++G  PD   
Sbjct: 604 EGMTEKALNFFNTLIEEREVDTVTYNT-MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662

Query: 467 YSAAIGGLIDIKRVDLALELFR 488
           Y++ I  L++  ++    EL +
Sbjct: 663 YNSFISLLMEDGKLSETDELLK 684



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 211/470 (44%), Gaps = 30/470 (6%)

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT---------SCSDEGEL 256
           A++D+ +       +  +ALQ++ +M    + P+    + L+          S S   E+
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
              + +I    +V T  +L N         G ++ A  +L+ M+               F
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGY----CLEGKLEDALGMLERMVSE-------------F 234

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
           K  V+P+  +++ I+  + K G+L     L  +M + G + N   YNNL+ G C    L+
Sbjct: 235 K--VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           E+++++  M+++   P   T N +   LC    +   L L+  M+    +P V     LI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL-IDIKRVDLALELFRDICAHGC 495
               + G ++EA + +  M  +G   + V ++ ++  L  + KR  +  ++   +  HG 
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            PD+V Y+ +I    K   ++ A ++  EM  KG+  +  T N +++  CK   +D+A  
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
            L+    K     D +TY TLI G     + + A+ +W+EM++    P   TF +LI GL
Sbjct: 473 LLNSA-HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           C   +   A+  F  + E G+ PD   F ++I  +  E     AFE   E
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 174/382 (45%), Gaps = 50/382 (13%)

Query: 43  VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD-YGWGYDK 101
           +GL  EA  L +Q++ +G+   N  ++N  L+ LCK    + V  ++KE+ D +G+  D 
Sbjct: 358 LGLSLEARKLMEQMENDGVKA-NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416

Query: 102 YTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIER 160
            T   L++ Y   G    AL +  E+   G  ++    + +L A  K  ++D+A  L+  
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476

Query: 161 MDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ 220
                  ++E T+  LI GF ++ +V+KAL+++D+M K       + ++ +IGGLC + +
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCN 277
            E+A++ + E+  SG+ PD    + +I     EG +     E + +   ++       CN
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF-EFYNESIKHSFKPDNYTCN 595

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML-------------------MIFKG 318
            ++  L   G  ++A N    +I+   +  V    +                   M  KG
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMT-QIGCMQ-------------------- 357
            + P+  +++  I+ L++DGKL     L ++ + + G M+                    
Sbjct: 656 -LEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEEL 714

Query: 358 --NVFLYNNLIDGLCNSNRLEE 377
                 Y+++ID LC+  RL+E
Sbjct: 715 NTEAIAYSDVIDELCSRGRLKE 736



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 103/192 (53%), Gaps = 3/192 (1%)

Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK---AQRVAEA 518
           P    +  A+   +   +  +AL++F+ +      P+++  N ++ GL +   +  ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
            ++F++M+  G+  +V T+N+L+NG+C  G ++ A+  L RM+ +   +PD +TY T++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
            +   GR  D   L  +M++ G  PNR+T+  L+ G CK    + A     +MK+  + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 639 DMFVFVALISAF 650
           D+  +  LI+  
Sbjct: 309 DLCTYNILINGL 320


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 1/295 (0%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P+  ++++++N + ++G++D A+   + +   GC  N   YN ++ GLC + R E++ E
Sbjct: 24  TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEE 83

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           L+ EM + G  P   T N +   LCR+  V  AL ++ ++   G  P       L+   C
Sbjct: 84  LMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFC 143

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K  K  +A  FL  MV  G  PDIV Y+  +  L     VD+A+EL   +   GC P ++
Sbjct: 144 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 203

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
           +YN +I GL KA +  EA +L NEM++KGL P + TY+ +  G C+   I+ A+    + 
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK- 262

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           ++     P+ + Y  +I GLC       AI L+  M   GC PN  T+  LI GL
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 317



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 162/311 (52%), Gaps = 1/311 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+ L  EM   GC  ++  YN +++G+C   R++++ E L+ +   G +P   + N + +
Sbjct: 11  AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 70

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
            LC  +    A  L+ +M  +G  P V    +LI  LC+ G    A   L  + + G  P
Sbjct: 71  GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 130

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           + + Y+  +      K++D A+     + + GC PD+V+YN +++ LC++  V  A +L 
Sbjct: 131 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 190

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +++  KG  P + +YN +I+G  K+G   +A+  L+ M+ K    PD+ITY+T+  GLC 
Sbjct: 191 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDIITYSTIAAGLCR 249

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
             R +DAI  + ++++ G  PN + + A+I GLCK     +A+  F  M   G  P+   
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 309

Query: 643 FVALISAFLSE 653
           +  LI     E
Sbjct: 310 YTILIEGLAYE 320



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 154/278 (55%), Gaps = 1/278 (0%)

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C  +  +++ +LL EM + G  P   T N +   +C+   V  A+  ++ +   G EP  
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
               +++K LC   +  +A   + +M Q+G  P++V ++  I  L     V+ ALE+   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
           I  +GC P+ ++YN ++   CK +++ +A    + M+++G  P + +YN L+   C+SG 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
           +D A+  L ++ +K   +P +I+Y T+IDGL  AG+  +A+ L NEM  KG  P+ IT+ 
Sbjct: 183 VDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
            +  GLC+ DR   A+  F  +++ G++P+  ++ A+I
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 55/375 (14%)

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD-- 239
           K+S   +A++L D+M   G   D   Y+V++ G+C+  +++ A++    +   G  P+  
Sbjct: 4   KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63

Query: 240 -FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
            + I+ K            L   E WED +          +M      G + Q       
Sbjct: 64  SYNIVLK-----------GLCTAERWEDAE---------ELM------GEMGQ------- 90

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
             KG P                 PN  +F+++I+ L + G ++ AL +  ++ + GC  N
Sbjct: 91  --KGCP-----------------PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 131

Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
              YN L+   C   +++++   L  M   G  P   + N++   LCR  +V  A+ L+ 
Sbjct: 132 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 191

Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
           +++ +G  P +     +I  L K GK  EA   L +MV +G  PDI+ YS    GL    
Sbjct: 192 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 251

Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
           R++ A+  F  +   G  P+ V YN II GLCK +    A DLF  MI  G +P+ +TY 
Sbjct: 252 RIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYT 311

Query: 539 LLINGWCKSGNIDQA 553
           +LI G    G I +A
Sbjct: 312 ILIEGLAYEGLIKEA 326



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 138/249 (55%), Gaps = 1/249 (0%)

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
           C+R     A+ L+ +MR +G  P +    +++  +C+ G+  +A  FL ++   G  P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
           V Y+  + GL   +R + A EL  ++   GC P+VV +N++IS LC+   V  A ++  +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
           +   G  P+  +YN L++ +CK   +D+AM  L  M+ +    PD+++Y TL+  LC +G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSG 181

Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
             D A+ L +++++KGCAP  I++  +I GL K  + + AL     M  KG++PD+  + 
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241

Query: 645 ALISAFLSE 653
            + +    E
Sbjct: 242 TIAAGLCRE 250



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 124/227 (54%), Gaps = 1/227 (0%)

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK     +A + L +M  +G  PDIV Y+  + G+    RVD A+E  +++ ++GC P+ 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V+YNI++ GLC A+R  +AE+L  EM  KG  P+V T+N+LI+  C+ G ++ A+  L +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
            + K   +P+ ++Y  L+   C   + D A+   + M  +GC P+ +++  L+T LC+  
Sbjct: 123 -IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181

Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
               A+     +K+KG  P +  +  +I           A E+L EM
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 163/364 (44%), Gaps = 21/364 (5%)

Query: 112 CNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C    + +A+ + +E+ D G   + V +++++    + G VD A E ++ +       N 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
            ++ +++ G     R + A +L  +M + G   +   ++++I  LC+   +E AL++  +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
           +   G TP+         S S    L    K+   D+ +        + + ++VS G   
Sbjct: 123 IPKYGCTPN---------SLSYNPLLHAFCKQKKMDKAM--------AFLDLMVSRGCYP 165

Query: 291 Q--AYNLLQAMIKGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLF 347
              +YN L   +      DV VE+L   K    +P   S++ +I+ L K GK   AL L 
Sbjct: 166 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 225

Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
            EM   G   ++  Y+ +  GLC  +R+E++     ++++ G +P     N++   LC+R
Sbjct: 226 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 285

Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
           ++   A++L   M   G  P     T+LI+ L   G   EA   L ++   G +   +  
Sbjct: 286 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLIN 345

Query: 468 SAAI 471
             AI
Sbjct: 346 KGAI 349



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 166/348 (47%), Gaps = 24/348 (6%)

Query: 47  EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
           ++A  L D+++ +G C P+  +YN ++  +C+   VD     LK +  YG   +  +   
Sbjct: 9   KQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
           +L+  C + +++ A  +  E+   G     V F++L+    + G V+ A E++E++    
Sbjct: 68  VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
              N  ++  L+H F K+ ++DKA+   D M   G   D   Y+ ++  LC++ ++++A+
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187

Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGE----LTLLVKEIWEDRDVNTMTLLCNSIMR 281
           +L  ++K  G  P     + +I   +  G+    L LL + + +    + +T   ++I  
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY--STIAA 245

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L     I+ A   ++A  K   + D+G+           PNT  ++ II  L K  +  
Sbjct: 246 GLCREDRIEDA---IRAFGK---VQDMGIR----------PNTVLYNAIILGLCKRRETH 289

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
            A+ LF  M   GCM N   Y  LI+GL     ++E+ +LL E+   G
Sbjct: 290 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 30  PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           P  + F  LI  L   GLVE A  + +Q+ + G C PN+ SYN LL A CK   +D    
Sbjct: 95  PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG-CTPNSLSYNPLLHAFCKQKKMDKAMA 153

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            L  M   G   D  +   LL   C SG+ D A+ + +++ D G     + ++ ++   +
Sbjct: 154 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 213

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G+  +A EL+  M    ++ +  T+  +  G  ++ R++ A++ F K+   G   +  
Sbjct: 214 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 273

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+ II GLCK ++   A+ L++ M G+G  P+    + LI   + EG    L+KE    
Sbjct: 274 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG----LIKEA--- 326

Query: 267 RDVNTMTLLCNS--IMRILVSNGSI 289
           RD+  +  LC+   + + L++ G+I
Sbjct: 327 RDL--LDELCSRGVVRKSLINKGAI 349



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 150/372 (40%), Gaps = 38/372 (10%)

Query: 75  ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
           A CK          L EM+D G   D  T   ++   C  G+ D A+     +  +G   
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
             V ++I+L         + A EL+  M       N  TF +LI    +K  V+ AL++ 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
           +++ K G   ++  Y+ ++   CK K+++ A+     M   G  PD    + L+T+    
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 254 GELTLLVKEIWEDRDVNTMTLLC--NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           GE+ + V+ + + +D     +L   N+++  L   G   +A  LL  M+           
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS---------- 230

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                KG + P+  ++  I   L ++ +++ A+  F ++  +G   N  LYN +I GLC 
Sbjct: 231 -----KG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
                 + +L   M  +G  P   T   +   L                    +E  +K 
Sbjct: 285 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGL-------------------AYEGLIKE 325

Query: 432 NTLLIKELCKHG 443
              L+ ELC  G
Sbjct: 326 ARDLLDELCSRG 337



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 37/240 (15%)

Query: 44  GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC-----------------KSCSVDLVE 86
           G V++A      +   G C PN  SYN +L+ LC                 K C  ++V 
Sbjct: 41  GRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 99

Query: 87  MR------------------LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
                               L+++  YG   +  +  PLL  +C   + DKA++  + ++
Sbjct: 100 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 159

Query: 129 DHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
             G + D   ++ LL A  + GEVD A EL+ ++ D        ++  +I G  K  +  
Sbjct: 160 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 219

Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
           +AL+L ++M   G   D   Y  I  GLC+  ++E A++ + +++  GI P+  + + +I
Sbjct: 220 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 181/381 (47%), Gaps = 36/381 (9%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLEESYE 380
           P   +++ +I  L+ +G+ +    L+ EM+  G C  +   Y+ LI   C   R + +  
Sbjct: 192 PTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIR 251

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
           LL EM+E+G +PT      +     +  +V GAL+L  +MR     P V   T LI+ L 
Sbjct: 252 LLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLG 311

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+  EA+ F  +M +EG  PD V  +  I  L    R+D  L+LF ++    C P+VV
Sbjct: 312 KAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVV 371

Query: 501 AYNIIISGLCKAQ-RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
            YN II  L +++ RV+E    F  M   G+ PS  TY++LI+G+CK+  I++AM+ L  
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEE 431

Query: 560 MLEK----------------------------------ESGSPDVITYTTLIDGLCIAGR 585
           M EK                                    GS     Y  +I  L  AGR
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491

Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
            DDAI L++EM + GC PN   + AL++GL +      AL   R M+E G  PD+  +  
Sbjct: 492 LDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNI 551

Query: 646 LISAFLSELNPPLAFEVLKEM 666
           +++       P  A E+L  M
Sbjct: 552 ILNGLAKTGGPHRAMEMLTNM 572



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 232/520 (44%), Gaps = 53/520 (10%)

Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM- 161
           L+ ++++  N+    KA+++F +I           ++ +++     G+ +K  EL   M 
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
           ++ + + +  T+  LI  F K  R D A++L ++M ++G    A +Y +II    K   +
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281

Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMR 281
             AL L+ EM+     PD    ++LI                                 R
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELI---------------------------------R 308

Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
            L   G ID+AY+    M +                    P+T   + +IN L K G+LD
Sbjct: 309 GLGKAGRIDEAYHFYHEMQRE----------------GCKPDTVVMNNMINFLGKAGRLD 352

Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNS-NRLEESYELLREMEESGFKPTHFTLNSM 400
             L LF EM    C+ NV  YN +I  L  S +R+ E +     M+ SG  P+ FT + +
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412

Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
               C+   +  A+ L+ +M  +G  P       LI  L K  +   A     ++ +   
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCG 472

Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
                 Y+  I  L    R+D A+ LF ++   GC P+V AYN ++SGL +A  + EA  
Sbjct: 473 SSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT 532

Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
              +M   G +P + +YN+++NG  K+G   +AM  L+ M +  +  PD ++Y T++  L
Sbjct: 533 TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSAL 591

Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             AG  ++A  L  EM   G   + IT+ +++  + K D+
Sbjct: 592 SHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 235/570 (41%), Gaps = 39/570 (6%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI-----LLVAFSKWGEVDKACELIERM 161
           +L+++      ++AL V    +DH W+   V        + + F +W    +        
Sbjct: 67  ILKIFKWGPDAERALEVLMLRVDH-WLVREVMKTDVGVNVKMQFFRWAAKKR-------- 117

Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM-YDVIIGGLCKNKQ 220
              N + +  T+  LIH      +  +  ++  +M +S       M    +I  L   K 
Sbjct: 118 ---NYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKM 174

Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDRDVNTMTLLCN 277
           +  A+ ++ ++K     P  +  + +I     EG+   +  L  E+  +      T+  +
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYS 234

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
           +++      G  D A  LL  M +                  + P    + +II+   K 
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKEN----------------GMQPTAKIYTMIISLFFKL 278

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
             +  ALSLF EM  + C  +VF Y  LI GL  + R++E+Y    EM+  G KP    +
Sbjct: 279 DNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVM 338

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           N+M   L +   +   L L  +M V    P  V +NT++        +  E F +   M 
Sbjct: 339 NNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK 398

Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
             G  P    YS  I G     R++ A+ L  ++   G  P   AY  +I  L KA+R  
Sbjct: 399 GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 458

Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
            A +LF E+       S   Y ++I    K+G +D A+     M  K   +P+V  Y  L
Sbjct: 459 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTPNVYAYNAL 517

Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
           + GL  A   D+A+    +M+E GC P+  ++  ++ GL K   P  A+     MK   +
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTI 577

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           KPD   +  ++SA         A E++KEM
Sbjct: 578 KPDAVSYNTVLSALSHAGMFEEAAELMKEM 607



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 227/508 (44%), Gaps = 31/508 (6%)

Query: 17  LAQDVVKSR-CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEA 75
           + Q++V+S  C ++P  L  +IR LG+  ++ +A  +F Q+K    C P   +YN ++  
Sbjct: 145 MIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARK-CQPTAQAYNSMIIM 203

Query: 76  LCKSCSVDLVEMRLKEMQDYGW-GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WV 133
           L      + V     EM + G    D  T + L+  +C  G+ D A+ + NE+ ++G   
Sbjct: 204 LIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQP 263

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
              ++++++  F K   V  A  L E M     R +  T+  LI G  K  R+D+A   +
Sbjct: 264 TAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFY 323

Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
            +M + G   D  + + +I  L K  +L+  L+L+ EM  S   P+    + +I +  + 
Sbjct: 324 HEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383

Query: 254 GELTLLVKEI--WEDRDVNTMTLLCNSIMRILV----SNGSIDQAYNLLQAM-IKGEPIA 306
                 V E+  W +R   +          IL+        I++A  LL+ M  KG P  
Sbjct: 384 KSR---VSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFP-- 438

Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
                          P  +++  +I+ L K  + DLA  LF+E+ +     +  +Y  +I
Sbjct: 439 ---------------PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 483

Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
             L  + RL+++  L  EM + G  P  +  N++   L R   +  AL  +RKM+  G  
Sbjct: 484 KHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCL 543

Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
           P +    +++  L K G    A   LT+M      PD V Y+  +  L      + A EL
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAEL 603

Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQR 514
            +++ A G   D++ Y+ I+  + K  +
Sbjct: 604 MKEMNALGFEYDLITYSSILEAIGKVDQ 631


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 211/497 (42%), Gaps = 57/497 (11%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A EL + + D N+     ++ +L+       RV+ A QLFD+M       D   Y +
Sbjct: 247 LDEAIELFQGLPDKNV----CSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGI 299

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           +I G C   +LE A++L  +M   G+ P+  + + ++                       
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVA---------------------- 337

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
              LLC+         G +  A  +++ M+  + I D  V                +  +
Sbjct: 338 ---LLCDK--------GRVSDALTVVEDMVHHKVILDEAV----------------YTTV 370

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
           ++     G L  A   F EM + G   +   Y  LI+GLC +  L+E+ ++L+EM     
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430

Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
                T   +    C+R  +  A  +   M  +G  P V   T L   LCK G    A  
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
            L +M  +G   +   Y++ I GL     +D A+    D+ A G  PDV  Y  +I  LC
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550

Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
           K+  +  A DL  EM+  G+ P++ TYN+L+NG+C SG ++     L  MLEK    P+ 
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI-HPNA 609

Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
            TY +L+   CI         ++  M  +   PN  T+  LI G CK    + A      
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNE 669

Query: 631 MKEKGMKPDMFVFVALI 647
           M EKG +     + ALI
Sbjct: 670 MIEKGFRLTASSYSALI 686



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 211/470 (44%), Gaps = 33/470 (7%)

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
           T   F+SD A +D+++  LC    L  A  L   ++  GI+P  E  + +++    +  +
Sbjct: 199 TYKAFSSDPASFDLLL--LC----LPSA-PLLRRVRQYGISPSPEACNAVLSRLPLDEAI 251

Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
            L   +   D++V +  +L    +++L   G ++ A  L   M                 
Sbjct: 252 ELF--QGLPDKNVCSYNIL----LKVLCGAGRVEDARQLFDEMAS--------------- 290

Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
                P+  ++ I+I+     G+L+ A+ L  +M   G   N  +Y +++  LC+  R+ 
Sbjct: 291 ----PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVS 346

Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
           ++  ++ +M             ++    C + D+V A     +M+ +G        T LI
Sbjct: 347 DALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLI 406

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             LC+ G+  EA + L +M+      D V Y+  + G     ++  A ++   +   G  
Sbjct: 407 NGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           P+VV Y  +  GLCK   V  A +L +EM  KGL  +  TYN LING CK+G +DQAM  
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRT 526

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           ++ M +     PDV TYTTLID LC +G  D A  L  EM + G  P  +T+  L+ G C
Sbjct: 527 MADM-DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFC 585

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
              R          M EK + P+   + +L+  +    N     E+ K M
Sbjct: 586 MSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 226/532 (42%), Gaps = 63/532 (11%)

Query: 46  VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
           ++EA  LF  +  + +C     SYN LL+ LC +  V+       EM       D  T  
Sbjct: 247 LDEAIELFQGLPDKNVC-----SYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYG 298

Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
            L+  YC  G+ + A+ + ++++  G   +  V++ ++      G V  A  ++E M   
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
            + L+E  +  ++ GF  K  +  A + FD+M + G A+D   Y  +I GLC+  +L+ A
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA 418

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT--LLVKEIWEDRDVNTMTLLCNSIMRI 282
            ++  EM    +  D    + L+      G++     V      R V    +   ++   
Sbjct: 419 EKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDG 478

Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
           L   G +  A  LL  M      ++ G+E+          N  +++ +IN L K G LD 
Sbjct: 479 LCKQGDVQAANELLHEM------SNKGLEL----------NACTYNSLINGLCKAGYLDQ 522

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A+    +M   G   +V+ Y  LID LC S  L+ +++LL+EM ++G KPT  T N +  
Sbjct: 523 AMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMN 582

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
             C    V G   L+          W                          M+++   P
Sbjct: 583 GFCMSGRVEGGKKLLE---------W--------------------------MLEKNIHP 607

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           +   Y++ +        +    E+++ +C+    P+   YNI+I G CKA+ + EA+   
Sbjct: 608 NATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFH 667

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITY 573
           NEMI KG   + ++Y+ LI    K     +A      M  E  +  PDV  +
Sbjct: 668 NEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/592 (23%), Positives = 247/592 (41%), Gaps = 72/592 (12%)

Query: 12  APLRVLAQDVVKS-RCFMS-PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           +P R   +  + + + F S P +   L+ CL S  L+        +V++ G+  P+  + 
Sbjct: 187 SPHRHFVEHYISTYKAFSSDPASFDLLLLCLPSAPLLR-------RVRQYGIS-PSPEAC 238

Query: 70  NCLLEALCKSCSVDLVE-MRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
           N +L  L    +++L + +  K +  Y           LL+V C +G+ + A  +F+E+ 
Sbjct: 239 NAVLSRLPLDEAIELFQGLPDKNVCSYNI---------LLKVLCGAGRVEDARQLFDEMA 289

Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
                D   + IL+  +   GE++ A +L++ M    +  N   +  ++     K RV  
Sbjct: 290 --SPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSD 347

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           AL + + M       D A+Y  ++ G C    L  A + + EM+  G+  D    + LI 
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLIN 407

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
                                     LC +        G + +A  +LQ M+      D 
Sbjct: 408 G-------------------------LCRA--------GELKEAEKVLQEMLARRLDVD- 433

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                            ++ ++++   K GK+  A  +   M Q G   NV  Y  L DG
Sbjct: 434 ---------------EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDG 478

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC    ++ + ELL EM   G +    T NS+   LC+   +  A+  +  M   G +P 
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPD 538

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V   T LI  LCK G+   A   L +M+  G  P IV Y+  + G     RV+   +L  
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
            +      P+   YN ++   C    +    +++  M ++ + P+  TYN+LI G CK+ 
Sbjct: 599 WMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           ++ +A    + M+EK        +Y+ LI  L    +  +A  L+++M ++G
Sbjct: 659 SMKEAQYFHNEMIEK-GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 174/404 (43%), Gaps = 29/404 (7%)

Query: 10  RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
           R++    + +D+V  +  +       ++    + G +  A   FD+++R+GL   +  +Y
Sbjct: 344 RVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLAT-DGVTY 402

Query: 70  NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
             L+  LC++  +   E  L+EM       D+ T T L+  YC  G+  +A  V N ++ 
Sbjct: 403 TTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQ 462

Query: 130 HGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
            G     V ++ L     K G+V  A EL+  M +  + LN  T+  LI+G  K   +D+
Sbjct: 463 RGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQ 522

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A++    M  +G   D   Y  +I  LCK+ +L+ A  L  EM  +GI P     + L+ 
Sbjct: 523 AMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMN 582

Query: 249 ----SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL-VSNG--------------SI 289
               S   EG   LL  E   +++++      NS+M+   + N               ++
Sbjct: 583 GFCMSGRVEGGKKLL--EWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNV 640

Query: 290 DQAYNLLQAMIKGEPIADVGVEML-----MIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
           +   N    +IKG   A    E       MI KG      SS+  +I  L K  K   A 
Sbjct: 641 EPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG-FRLTASSYSALIRLLNKKKKFVEAR 699

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
            LF +M + G      +YN  ID   N + LE +  L  E+ E+
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEA 743



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 37/237 (15%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           LI  L   G +++A      +   GL  P+ Y+Y  L++ALCKS  +D     L+EM D 
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGL-KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN 568

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKA---------------LSVFNEIIDHGWV------- 133
           G      T   L+  +C SG+ +                  + +N ++    +       
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKST 628

Query: 134 --------------DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
                         +E+ ++IL+    K   + +A      M +   RL   ++  LI  
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRL 688

Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
             KK +  +A +LF  M K GF ++  +Y+  I        LE  L L  E+  + I
Sbjct: 689 LNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/600 (24%), Positives = 263/600 (43%), Gaps = 86/600 (14%)

Query: 3   SILSRARRI-APLRVLAQDVVKS-RCFMS-PGALGFLIRCLGSVGLV------------- 46
           +IL RA R  +P R   +  + + + F S P +   L+ CL S  L+             
Sbjct: 168 AILVRALRFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISPSPE 227

Query: 47  -----------EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
                      +EA  LF ++  +  C     SYN LL+ALC +  +        EM   
Sbjct: 228 SCNAVLCRLPLDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEMASP 282

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
               D  T   ++  YC   + + A+ + +E+   G  ++   ++ ++      G+V  A
Sbjct: 283 P---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
             ++E M    + L+   F  ++ GF +K  +  A   FD+M K G A+D   Y  +I G
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399

Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL 274
           LC+  +L+ A ++  EM+  G+                             D D  T T+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGL-----------------------------DVDAVTYTV 430

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
           L +   ++    G + +A+ +   M++                  V+PN  ++  + + L
Sbjct: 431 LIDGYCKV----GKMTEAFLVHNKMVQKR----------------VTPNVVTYTALSDGL 470

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +  A  L  EM   G   N+F YN+LI+GLC +  LE++   + +M+E+G KP  
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
           +T  ++   LC+ +++  A +L+++M  +G +P +    +L+   C  G+     R L  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
           M+++   P+   Y++ +      K +    E+++ + +    P+   YNI+I G CKA+ 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITY 573
           + EA    +EMI KG   + ++YN LI    K     +A     +M  ++ +  PDV  +
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 231/498 (46%), Gaps = 30/498 (6%)

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +D+A +L + + + N      ++ +L+       R+  A QLFD+M       D   Y +
Sbjct: 238 LDEAVQLFQELPEKNT----CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGI 290

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVN 270
           ++ G C   +LE A++L SEM   G+  +    + +I    DEG+++  V+ + ED  ++
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR-VVEDMVMH 349

Query: 271 TMTL---LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
            + L   +  ++M      G +  A N    M K    AD GV               ++
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD-GV---------------TY 393

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +IN L + G+L  A  + +EM   G   +   Y  LIDG C   ++ E++ +  +M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
               P   T  ++   LC++ DV  A  L+ +M  +G E  +     LI  LCK G   +
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
           A R + DM + G  PD+  Y+  IG L   K +D A  L +++   G  P +V YN++++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
           G C + RV   + L   M+ K + P+  TYN L+  +C   N+         ML +E   
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEV-V 632

Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
           P+  TY  LI G C A    +A+   +EM EKG      ++ ALI  L K  +   A   
Sbjct: 633 PNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL 692

Query: 628 FRMMKEKGM--KPDMFVF 643
           F  M++  +  +PD++ F
Sbjct: 693 FEKMRKDRLTAEPDVYNF 710



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
           +L + +  +SP+  S + ++  L     LD A+ LF+E+ +    +N   YN L+  LC 
Sbjct: 214 LLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPE----KNTCSYNILLKALCT 265

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
           + R++++++L  EM      P   T   M    C   ++  A+ L+ +M  +G E     
Sbjct: 266 AGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVA 322

Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
            T +I  LC  G+  +A R + DMV  G + D   ++  + G      +  A   F ++ 
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382

Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
             G   D V Y  +I+GLC+A  + EAE +  EM  KGL     TY +LI+G+CK G + 
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442

Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
           +A L  ++M++K   +P+V+TYT L DGLC  G    A  L +EM  KG   N  T+ +L
Sbjct: 443 EAFLVHNKMVQKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 612 ITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           I GLCK      A+     M E G+KPD++ +  +I A         A  +L+EM
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 215/472 (45%), Gaps = 37/472 (7%)

Query: 197 TKSGFASDAAMYDVIIGGLC-KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
           T   F+SD   +D+++  LC  +  L + L+ Y      GI+P  E  + ++     + E
Sbjct: 190 TYKAFSSDPVSFDLLL--LCLPSAPLLLRLRQY------GISPSPESCNAVLCRLPLD-E 240

Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
              L +E+ E    NT +   N +++ L + G I  A+ L   M                
Sbjct: 241 AVQLFQELPEK---NTCSY--NILLKALCTAGRIKDAHQLFDEMAS-------------- 281

Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                 P+  ++ I+++      +L+ A+ L  EM   G   N   Y ++I  LC+  ++
Sbjct: 282 -----PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQV 336

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
            ++  ++ +M   G         ++    CR+ D+  A N   +M+ +G        T L
Sbjct: 337 SDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTAL 396

Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
           I  LC+ G+  EA R L +M  +G   D V Y+  I G   + ++  A  +   +     
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456

Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV Y  +  GLCK   V  A +L +EM +KGL  ++ TYN LING CK+GN++QAM 
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516

Query: 556 CLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
            +  M   E+G  PDV TYTT+I  LC +   D A  L  EM +KG  P  +T+  L+ G
Sbjct: 517 TMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            C   R          M EK + P+   + +L+  +  E N     E+ K M
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 224/509 (44%), Gaps = 27/509 (5%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
           +   L++ L + G +++A+ LFD++       P+  +Y  ++   C    ++     L E
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
           M   G   +    T ++ + C+ GQ   A+ V  +++ HG V D  VF+ ++  F + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
           +  A    + M    +  +  T+  LI+G  +   + +A ++  +M   G   DA  Y V
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIWED 266
           +I G CK  ++  A  ++++M    +TP+    + L      +G++     LL +   + 
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            ++N  T   NS++  L   G+++QA   ++ MI  +             +  + P+  +
Sbjct: 491 LELNIFTY--NSLINGLCKAGNLEQA---MRTMIDMD-------------EAGLKPDVYT 532

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  II  L +  +LD A SL +EM   G    +  YN L++G C S R+E    LL  M 
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
           E    P   T NS+ +  C  +++     + + M  Q   P      +LIK  CK     
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
           EA  F ++M+++GF      Y+A I  L   K+   A  LF  +       +   YN  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712

Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
                   +     L +E++   L+ S+A
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLVKSIA 741


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 245/589 (41%), Gaps = 88/589 (14%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  S+N LL         ++V   L+EM+  G   +  T   +L   C     DKA+S 
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           FN                          ++AC L E ++  +      T+  ++ G  K 
Sbjct: 87  FN-----------------------SRTEEACRLFEAIEAPD----SVTYTAIVDGLFKA 119

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
              D  L+ ++KM  S        Y V++ GLCK  ++E A  ++ EM   G  PD    
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAY 179

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KG 302
           S LI   S                                   G +D+A  L+  MI +G
Sbjct: 180 SSLIDGLS---------------------------------KAGRVDEARKLVDLMIARG 206

Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
            P                 P   ++  I+  L K G++  A+   +EM +      V  Y
Sbjct: 207 PP-----------------PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 249

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC---RRQDVVGALNLVRK 419
           + ++ G     ++EE++ ++ EM +    P   +       L    RR++   A  +   
Sbjct: 250 SFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE---AEKVFET 306

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M  +G +P +    ++I   CK G    A   L  M +    P+   Y+  + G +   R
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG--LIPSVATY 537
           ++ ALEL++ I   G  P  V YN +I+ LCK +++ EA +L  EM  +   L PS+ TY
Sbjct: 367 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 426

Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
           +++I+G  K G  ++A   L+ M++     PD  TYT+LI  L  AG+   A+ L  EM 
Sbjct: 427 SMIIHGLGKVGMEERAFDLLAEMIDN-GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 485

Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
           + G  P+  T+  L+  LC+ D   A  +   MM+  G  P+ F F A+
Sbjct: 486 KAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMMR-NGHTPNEFTFKAV 533



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 211/455 (46%), Gaps = 13/455 (2%)

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
            L +  QL  AL  +           F IL +   +  D   +  L++E+ + R + +  
Sbjct: 6   ALVRGGQLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREM-KARGITSNG 64

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                I+  L +   +D+A +   +  +         E   +F+   +P++ ++  I++ 
Sbjct: 65  ATHGVILSALCARRDLDKAVSYFNSRTE---------EACRLFEAIEAPDSVTYTAIVDG 115

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
           L K G  D  L  + +M    C   +  Y  L+DGLC ++++E + ++  EM   G KP 
Sbjct: 116 LFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPD 175

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               +S+   L +   V  A  LV  M  +G  P     T ++  LCK G+  EA + + 
Sbjct: 176 IIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 235

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M +    P +  YS  + G I + +V+ A  +  ++    C PD ++Y + I  L    
Sbjct: 236 EMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           R  EAE +F  M+ KG  P + TY ++I+ +CK G++  A   L R+++K +  P+   Y
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL-RLMDKAAVKPNRYIY 354

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
           T ++DG   + R ++A+ L+  + + G  P+ +T+  +I  LCK  +   AL   R M+ 
Sbjct: 355 TMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQR 414

Query: 634 KG--MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +   ++P +  +  +I           AF++L EM
Sbjct: 415 RKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 22/413 (5%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C P   +Y  L++ LCK+  V+      +EM   G   D    + L+     +G+ D+A 
Sbjct: 137 CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEAR 196

Query: 122 SVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
            + + +I  G     V ++ ++    K G + +A + I+ M    +R    T+  ++ G+
Sbjct: 197 KLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGY 256

Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
           +   +V++A  + ++M     A D   Y + I  L    + E A +++  M   G  PD 
Sbjct: 257 IGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDM 316

Query: 241 EILSKLITSCSDEGELTLL--VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
                +I +   EG +     V  + +   V     +   IM   V +  +++A  L Q 
Sbjct: 317 HTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ- 375

Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG--CM 356
                           I K  + P+T +++ +IN L K  K+D AL L REM +      
Sbjct: 376 ---------------RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELE 420

Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
            ++  Y+ +I GL      E +++LL EM ++G  P  FT  S+ + L     V  A+ L
Sbjct: 421 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 480

Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
           + +M   G  P       L++ LC+      A+  L +M++ G  P+   + A
Sbjct: 481 LEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKA 532



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 174/405 (42%), Gaps = 85/405 (20%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVD-----LVE 86
           A   LI  L   G V+EA  L D +   G   P   +Y  ++  LCK   +      + E
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARG-PPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 236

Query: 87  MR------------------------------LKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
           MR                              ++EM D     D  + T  ++   + G+
Sbjct: 237 MRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 296

Query: 117 FDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV 175
            ++A  VF  +++ G   D H + I++  F K G +  A  ++  MD   ++ N   + +
Sbjct: 297 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 356

Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
           ++ GFVK SR+++AL+L+ ++ K G       Y+ +I  LCK K+++ AL+L  EM+   
Sbjct: 357 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR- 415

Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
                                    KE  E   V T +++ + + ++    G  ++A++L
Sbjct: 416 -------------------------KEELEPSIV-TYSMIIHGLGKV----GMEERAFDL 445

Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
           L  MI      D G          V P+  ++  +I TL   GK+  A+ L  EM + G 
Sbjct: 446 LAEMI------DNG----------VIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 489

Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
             +   Y  L+  LC S+ ++ +++LL+EM  +G  P  FT  ++
Sbjct: 490 FPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 222/495 (44%), Gaps = 62/495 (12%)

Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF-DKMTKSGFAS 203
           F +W       E I     CN          L+   VK  R  +A Q+F D++      +
Sbjct: 53  FFRWVTRSHRGESIHNNFTCN---------CLLRTLVKARRHHQAYQIFRDELLGQHCDT 103

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           +   Y+ +IGG CK   +E A               F++L+++              KE 
Sbjct: 104 NHITYNTLIGGFCKAGDMERA---------------FQLLAEM--------------KER 134

Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
               DV T +    SI++ L + G++ +A    +  ++                   +P+
Sbjct: 135 GHSPDVVTHS----SIVQALCNTGNLSRAMQYFRESVE------------------CAPD 172

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
           +  F+I+++ L K  +L  A  +  EM++ G + +V  YN+LIDGLC S R+EE+ +LL 
Sbjct: 173 SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            M +   +P   T N++    C+      A  L+ +M   G  P V     LI   C+  
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +A   L  M +    P++V Y+  I GL D  R + A EL  ++   G  PD++ YN
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I   C+  ++ +A  + N M+ +G+IP   +Y  L     KS   D+A   L  M + 
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
               P++ T+ +L++GLC + R D+A  L   M   GC P   T+  L+TGLCK  R   
Sbjct: 413 -GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471

Query: 624 ALVHFRMMKEKGMKP 638
           A     MM  +G++P
Sbjct: 472 AKEVLVMMVSEGIQP 486



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 194/412 (47%), Gaps = 25/412 (6%)

Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV--------------- 320
           CN ++R LV      QAY + +  + G+      +    +  G                 
Sbjct: 72  CNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131

Query: 321 -----SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
                SP+  +   I+  L   G L  A+  FRE   + C  +  L+N L+ GLC +N+L
Sbjct: 132 KERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQL 189

Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTL 434
            E+ +++ EM E G  P   T NS+   LC+   +  A  L+  M  +   P  V +NTL
Sbjct: 190 SEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTL 249

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
            I   CK G    A + +  M+Q G  PD+V +++ I G     ++D A E+   +    
Sbjct: 250 -IYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
           C P++V YN++ISGLC A R  EA +L +EM  +G++P + TYN LI  +C++  I+QA 
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
              + M+E+    PD I+Y TL   L  + R D+A  L + M + G  PN  TF +L+ G
Sbjct: 369 QIQNLMVER-GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427

Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           LC   R   A     +M+  G  P    +  L++          A EVL  M
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMM 479



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 198/433 (45%), Gaps = 19/433 (4%)

Query: 62  CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKAL 121
           C  N+ +YN L+   CK+  ++     L EM++ G   D  T + ++Q  CN+G   +A+
Sbjct: 101 CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAM 160

Query: 122 SVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
             F E ++    D  +F+IL+    K  ++ +A ++IE M +  I  +  T+  LI G  
Sbjct: 161 QYFRESVECAP-DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC 219

Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
           K  R+++A QL + M K     +   Y+ +I G CK     +A QL   M  SG  PD  
Sbjct: 220 KSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVV 279

Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI-LVSNGSIDQAYNLLQAMI 300
             + LI+    + ++         D+    + L+   +    LV+       YN+L + +
Sbjct: 280 TFNSLISGFCQKSKI---------DKACEVLHLMKKGLCAPNLVT-------YNVLISGL 323

Query: 301 KGEPIADVGVEMLMIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
                A+   E+L    G  + P+  +++ +I    ++ +++ A  +   M + G + + 
Sbjct: 324 CDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDG 383

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
             Y  L   L  S R +E++ LL  M ++G  P  FT NS+   LC  + +  A +L+  
Sbjct: 384 ISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAV 443

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           MR  G +P      +L+  LCK G+  +A   L  MV EG  P +      +  L    +
Sbjct: 444 MRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503

Query: 480 VDLALELFRDICA 492
            DLAL  F  + A
Sbjct: 504 QDLALHYFDQVVA 516



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 179/404 (44%), Gaps = 51/404 (12%)

Query: 55  QVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN 113
           Q  RE + C P++  +N L+  LCK+  +      ++EM + G   D  T   L+   C 
Sbjct: 161 QYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCK 220

Query: 114 SGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKT 172
           S + ++A  +   ++        V ++ L+  + K G    A +LIERM       +  T
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280

Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
           F  LI GF +KS++DKA ++   M K   A +   Y+V+I GLC   +   A +L SEM 
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
           G GI PD      +IT                            NS++ I   N  I+QA
Sbjct: 341 GRGILPD------IITY---------------------------NSLIGIFCRNFQIEQA 367

Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
           +                ++ LM+ +G + P+  S+  +   LLK  + D A +L   M  
Sbjct: 368 FQ---------------IQNLMVERGVI-PDGISYCTLAVALLKSERFDEAFALLDNMFD 411

Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
            G + N+F +N+L++GLC S RL+E+  LL  M   G  P   T   +   LC+   V  
Sbjct: 412 AGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471

Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
           A  ++  M  +G +P V  +  ++  L + GK   A  +   +V
Sbjct: 472 AKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 572 TYTTLIDGLCIAGRPDDAIMLW-NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
           T   L+  L  A R   A  ++ +E+  + C  N IT+  LI G CK      A      
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 631 MKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
           MKE+G  PD+    +++ A  +  N   A +  +E
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 181/335 (54%), Gaps = 5/335 (1%)

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
           +P    F  I+  L+K      A+SL R+M   G   N+   N LI+  C+  ++  S+ 
Sbjct: 62  TPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFS 121

Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKEL 439
           +L ++ + G++P   TLN++ + LC + +V  +L+   K+  QG +   V + TLL   L
Sbjct: 122 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLL-NGL 180

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK G+   A + L  +      PD+V YS  I GL   K V+ A + F ++ A G  P+V
Sbjct: 181 CKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNV 240

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           + Y+ +I G C A ++  A  L NEMI K + P+V TYN+LI+  CK G + +A   L+ 
Sbjct: 241 ITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAE 300

Query: 560 MLEKESGSP-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
           M  K  G P DV+TY +++DGLC +   D A  L+ +M++ G  PN+ T+ ALI GLCK 
Sbjct: 301 MHHK--GQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKG 358

Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
            R + A   F+ +  KG   D+  +  +IS    E
Sbjct: 359 GRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKE 393



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 197/419 (47%), Gaps = 23/419 (5%)

Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
           VD  +  F+++           +  I+G L K K    A+ L  +M+  GI P+   L+ 
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 246 LITSCSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
           LI      G++    ++L K +      +T+TL  N++M+ L   G + ++ +       
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITL--NTLMKGLCLKGEVKRSLHF------ 157

Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
            + +   G +M          N  S+  ++N L K G+   A+ L R +       +V +
Sbjct: 158 HDKVVAQGFQM----------NQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVM 207

Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
           Y+ +IDGLC    + ++Y+   EM   G  P   T +++    C    ++GA +L+ +M 
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267

Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
           ++   P V    +LI  LCK GK  EA + L +M  +G   D+V Y++ + GL   + +D
Sbjct: 268 LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD 327

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            A  LF  +   G  P+   Y  +I GLCK  R+  A+ LF  ++ KG    V TYN++I
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMI 387

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
           +G CK G  D+A+   S+M E     P+ +T+  +I  L      D A  L + M  KG
Sbjct: 388 SGLCKEGMFDKALAMKSKM-EDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 168/372 (45%), Gaps = 38/372 (10%)

Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
           +K  P A + +   M  KG + PN  + +I+IN     G++  + S+  ++ ++G   + 
Sbjct: 78  MKHYPTA-ISLSRQMEVKG-IEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDT 135

Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
              N L+ GLC    ++ S     ++   GF+    +  ++   LC+  +   A+ L+R 
Sbjct: 136 ITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRM 195

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           +  +   P V   + +I  LCK     +A+ F ++M   G  P+++ YS  I G     +
Sbjct: 196 IEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQ 255

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
           +  A  L  ++      P+V  YNI+I  LCK  +V EA+ L  EM  KG    V TYN 
Sbjct: 256 LMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNS 315

Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP------------- 586
           +++G CKS N+D+A     +M +K    P+  TYT LIDGLC  GR              
Sbjct: 316 VLDGLCKSQNLDKATALFMKM-KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK 374

Query: 587 ----------------------DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
                                 D A+ + ++ME+ GC PN +TF  +I  L + D    A
Sbjct: 375 GCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKA 434

Query: 625 LVHFRMMKEKGM 636
                 M  KG+
Sbjct: 435 EKLLHGMIAKGL 446



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 174/397 (43%), Gaps = 20/397 (5%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           F  +L    K      A  L  +M+   I  N  T  +LI+ F    ++  +  +  K+ 
Sbjct: 68  FGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKIL 127

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
           K G+  D    + ++ GLC   +++ +L  + ++   G   +      L+      GE  
Sbjct: 128 KLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 187

Query: 258 LLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLM 314
             VK   + EDR      ++ ++I+  L  +  ++QAY+    M  +G            
Sbjct: 188 CAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARG------------ 235

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
                + PN  ++  +I      G+L  A SL  EM       NV+ YN LID LC   +
Sbjct: 236 -----IFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGK 290

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
           ++E+ +LL EM   G      T NS+   LC+ Q++  A  L  KM+  G +P     T 
Sbjct: 291 VKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTA 350

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           LI  LCK G+   A +    ++ +G   D+  Y+  I GL      D AL +   +  +G
Sbjct: 351 LIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNG 410

Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           C P+ V ++III  L +     +AE L + MI KGL+
Sbjct: 411 CIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 171/378 (45%), Gaps = 25/378 (6%)

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
           ++M+  G   +  TL  L+  +C+ GQ   + SV  +I+  G+  D    + L+      
Sbjct: 89  RQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLK 148

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           GEV ++    +++     ++N+ ++  L++G  K      A++L   +       D  MY
Sbjct: 149 GEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMY 208

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL----TLLVKEIW 264
             II GLCK+K +  A   +SEM   GI P+    S LI      G+L    +LL + I 
Sbjct: 209 STIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMIL 268

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPN 323
           ++ + N  T   N ++  L   G + +A  LL  M  KG+P ADV               
Sbjct: 269 KNINPNVYTY--NILIDALCKEGKVKEAKKLLAEMHHKGQP-ADV--------------- 310

Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
             +++ +++ L K   LD A +LF +M + G   N + Y  LIDGLC   RL+ + +L +
Sbjct: 311 -VTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQ 369

Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
            +   G      T N M   LC+      AL +  KM   G  P      ++I+ L +  
Sbjct: 370 HLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKD 429

Query: 444 KAMEAFRFLTDMVQEGFL 461
           +  +A + L  M+ +G L
Sbjct: 430 ENDKAEKLLHGMIAKGLL 447



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 1/252 (0%)

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
           L + +    A++L R+M V+G EP +    +LI   C  G+   +F  L  +++ G+ PD
Sbjct: 75  LVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPD 134

Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
            +  +  + GL     V  +L     + A G   + V+Y  +++GLCK      A  L  
Sbjct: 135 TITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLR 194

Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
            +  +   P V  Y+ +I+G CK   ++QA    S M       P+VITY+TLI G C+A
Sbjct: 195 MIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM-NARGIFPNVITYSTLIWGFCLA 253

Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
           G+   A  L NEM  K   PN  T+  LI  LCK  + + A      M  KG   D+  +
Sbjct: 254 GQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTY 313

Query: 644 VALISAFLSELN 655
            +++       N
Sbjct: 314 NSVLDGLCKSQN 325



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 4/258 (1%)

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           D V   N +  +R   H P +     ++  L K      A      M  +G  P++V  +
Sbjct: 48  DTVSQFNRLLLVR---HTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLN 104

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I     + ++  +  +   I   G  PD +  N ++ GLC    V  +    ++++ +
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G   +  +Y  L+NG CK G    A+  L RM+E  S  PDV+ Y+T+IDGLC     + 
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLL-RMIEDRSTRPDVVMYSTIIDGLCKDKIVNQ 223

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A   ++EM  +G  PN IT+  LI G C   +   A      M  K + P+++ +  LI 
Sbjct: 224 AYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILID 283

Query: 649 AFLSELNPPLAFEVLKEM 666
           A   E     A ++L EM
Sbjct: 284 ALCKEGKVKEAKKLLAEM 301



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/397 (20%), Positives = 153/397 (38%), Gaps = 85/397 (21%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           PN  + N L+   C    +      L ++   G+  D  TL  L++  C  G+  ++L  
Sbjct: 98  PNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHF 157

Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
            ++++  G+ +++  +  LL    K GE   A +L+  ++D + R +   +  +I G  K
Sbjct: 158 HDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCK 217

Query: 183 KSRVDKALQLFDKMTKSGF-----------------------------------ASDAAM 207
              V++A   F +M   G                                      +   
Sbjct: 218 DKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYT 277

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           Y+++I  LCK  +++ A +L +EM   G                             +  
Sbjct: 278 YNILIDALCKEGKVKEAKKLLAEMHHKG-----------------------------QPA 308

Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
           DV T     NS++  L  + ++D+A  L   M                 K  + PN  ++
Sbjct: 309 DVVTY----NSVLDGLCKSQNLDKATALFMKMK----------------KWGIQPNKYTY 348

Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
             +I+ L K G+L  A  LF+ +   GC  +V  YN +I GLC     +++  +  +ME+
Sbjct: 349 TALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMED 408

Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
           +G  P   T + + R L  + +   A  L+  M  +G
Sbjct: 409 NGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 249/561 (44%), Gaps = 28/561 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +++ Y   G   +A   F  +   G      +++ L+ A++   ++D+A   + +M +  
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I ++  T+ V++ GF K    + A   FD+  +     +A++Y  II   C+   +E A 
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434

Query: 226 QLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSI 279
            L  EM+  GI     I   ++   T  +DE +  ++ K + E      V T   L N  
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            ++    G I +A  + + M       + GV+           N  ++ ++IN  +K   
Sbjct: 495 TKV----GKISKALEVSRVM------KEEGVKH----------NLKTYSMMINGFVKLKD 534

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A ++F +M + G   +V LYNN+I   C    ++ + + ++EM++   +PT  T   
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +     +  D+  +L +   MR  G  P V     LI  L +  +  +A   L +M   G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              +   Y+  + G   +     A E F  +   G   D+  Y  ++   CK+ R+  A 
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  EM  + +  +   YN+LI+GW + G++ +A   + +M +KE   PD+ TYT+ I  
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-KKEGVKPDIHTYTSFISA 773

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
              AG  + A     EME  G  PN  T+  LI G  +   P  AL  +  MK  G+KPD
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833

Query: 640 MFVFVALISAFLSELNPPLAF 660
             V+  L+++ LS  +   A+
Sbjct: 834 KAVYHCLLTSLLSRASIAEAY 854



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 217/516 (42%), Gaps = 22/516 (4%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      ++      G  E A+  FD+ KR    + N   Y  ++ A C++C+++  E 
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERAEA 435

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y       K L VF  + + G+    V +  L+  ++
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G++ KA E+   M +  ++ N KT+ ++I+GFVK      A  +F+ M K G   D  
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+ II   C    ++ A+Q   EM+     P       +I   +  G++   +      
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL------ 609

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            +V  M   C  +  +   NG I+      Q M K   I D   EM +     VS N  +
Sbjct: 610 -EVFDMMRRCGCVPTVHTFNGLINGLVEKRQ-MEKAVEILD---EMTL---AGVSANEHT 661

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  I+      G    A   F  +   G   ++F Y  L+   C S R++ +  + +EM 
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                   F  N +     RR DV  A +L+++M+ +G +P +   T  I    K G   
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A + + +M   G  P+I  Y+  I G       + AL  + ++ A G  PD   Y+ ++
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841

Query: 507 SGLCKAQRVAEAE------DLFNEMITKGLIPSVAT 536
           + L     +AEA        +  EM+  GLI  + T
Sbjct: 842 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 249/561 (44%), Gaps = 28/561 (4%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
           +++ Y   G   +A   F  +   G      +++ L+ A++   ++D+A   + +M +  
Sbjct: 313 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 372

Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
           I ++  T+ V++ GF K    + A   FD+  +     +A++Y  II   C+   +E A 
Sbjct: 373 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 432

Query: 226 QLYSEMKGSGITPDFEILSKLI---TSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSI 279
            L  EM+  GI     I   ++   T  +DE +  ++ K + E      V T   L N  
Sbjct: 433 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 492

Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
            ++    G I +A  + + M       + GV+           N  ++ ++IN  +K   
Sbjct: 493 TKV----GKISKALEVSRVM------KEEGVKH----------NLKTYSMMINGFVKLKD 532

Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
              A ++F +M + G   +V LYNN+I   C    ++ + + ++EM++   +PT  T   
Sbjct: 533 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 592

Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
           +     +  D+  +L +   MR  G  P V     LI  L +  +  +A   L +M   G
Sbjct: 593 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 652

Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
              +   Y+  + G   +     A E F  +   G   D+  Y  ++   CK+ R+  A 
Sbjct: 653 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 712

Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
            +  EM  + +  +   YN+LI+GW + G++ +A   + +M +KE   PD+ TYT+ I  
Sbjct: 713 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-KKEGVKPDIHTYTSFISA 771

Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
              AG  + A     EME  G  PN  T+  LI G  +   P  AL  +  MK  G+KPD
Sbjct: 772 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 831

Query: 640 MFVFVALISAFLSELNPPLAF 660
             V+  L+++ LS  +   A+
Sbjct: 832 KAVYHCLLTSLLSRASIAEAY 852



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 217/516 (42%), Gaps = 22/516 (4%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           MS      ++      G  E A+  FD+ KR    + N   Y  ++ A C++C+++  E 
Sbjct: 375 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERAEA 433

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFS 146
            ++EM++ G          ++  Y       K L VF  + + G+    V +  L+  ++
Sbjct: 434 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 493

Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
           K G++ KA E+   M +  ++ N KT+ ++I+GFVK      A  +F+ M K G   D  
Sbjct: 494 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 553

Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
           +Y+ II   C    ++ A+Q   EM+     P       +I   +  G++   +      
Sbjct: 554 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL------ 607

Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
            +V  M   C  +  +   NG I+      Q M K   I D   EM +     VS N  +
Sbjct: 608 -EVFDMMRRCGCVPTVHTFNGLINGLVEKRQ-MEKAVEILD---EMTL---AGVSANEHT 659

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
           +  I+      G    A   F  +   G   ++F Y  L+   C S R++ +  + +EM 
Sbjct: 660 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719

Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
                   F  N +     RR DV  A +L+++M+ +G +P +   T  I    K G   
Sbjct: 720 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 779

Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
            A + + +M   G  P+I  Y+  I G       + AL  + ++ A G  PD   Y+ ++
Sbjct: 780 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 839

Query: 507 SGLCKAQRVAEAE------DLFNEMITKGLIPSVAT 536
           + L     +AEA        +  EM+  GLI  + T
Sbjct: 840 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 875


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 201/457 (43%), Gaps = 53/457 (11%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           YD+++  LCK    + A  ++  M+  GI PD  IL  L++S +  G+L      + E  
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +     + N+++ +LV    +D+A  L +  +  EP                 P+  
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPY--------------FVPDVY 215

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           SF+I+I  L + G++D A   F+ M   GC  ++  YN LI+G C  N + + ++LL+E 
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE- 274

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                                             M ++G  P V   T +I   CK G  
Sbjct: 275 ---------------------------------DMLIKGVSPDVITYTSIISGYCKLGDM 301

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A     +MV  G  P+   ++  I G   +  +  A+ ++  +   GC PDVV +  +
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSL 361

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I G C+   V +   L+ EM  + L P+V TY +LIN  CK   I +A   L R L+   
Sbjct: 362 IDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL-RHLKSSE 420

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             P    Y  +IDG C AG+ D+A  +  EM+EK C P++ITF  LI G C   R   A+
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
             F  M E    PD     +LIS  L    P  A ++
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 200/466 (42%), Gaps = 51/466 (10%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACEL 157
           ++ Y L  L++  C  G  D A  VF+ +   G + D  +  +L+ ++++ G++D A   
Sbjct: 109 FNTYDL--LMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +  +    I+++   +  L++  VK++ VD+A+ LF +  +  F  D   ++++I GLC+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             +++ A + +  M   G  PD                             + +   L N
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPD-----------------------------IVSYNTLIN 257

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
              R+      I + ++LL+                M+ KG VSP+  ++  II+   K 
Sbjct: 258 GFCRV----NEISKGHDLLKED--------------MLIKG-VSPDVITYTSIISGYCKL 298

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +  A  LF EM   G   N F +N LIDG      +  +  +  +M   G  P   T 
Sbjct: 299 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            S+    CR  +V   L L  +M+V+   P V    +LI  LCK  +  EA  FL  +  
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              +P    Y+  I G     +VD A  +  ++    C PD + + I+I G C   R+ E
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVE 478

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           A   F +MI    +P   T N LI+   K+G  ++A       L+K
Sbjct: 479 AISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 167/397 (42%), Gaps = 44/397 (11%)

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T+    +   R+  SN SI Q Y+L  ++ +  P  D         +  +  + +    +
Sbjct: 2   TLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCD---------REIIRHSEAWLVKV 52

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES-- 388
           + TL            FR  +   C    +L  NL   +        ++E+++   +   
Sbjct: 53  VCTLF-----------FRSHSLNACFG--YLSRNLNPSI--------AFEVIKRFSDPLL 91

Query: 389 -----GFKPTHFTLNSMF-------RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
                 F  TH ++N  F       R LC+      A  +   MR  G  P      LL+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               + GK   A  FL ++   G       Y+  +  L+    VD A+ LFR+       
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV ++NI+I GLC+   + +A + F  M   G  P + +YN LING+C+   I +    
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L   +  +  SPDVITYT++I G C  G    A  L++EM   G  PN  TF  LI G  
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           K    R+A+V +  M   G  PD+  F +LI  +  E
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 192/442 (43%), Gaps = 52/442 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  VGL + A ++FD ++ +G+ +P++     L+ +  +   +D  +  L E+  Y
Sbjct: 115 LMRNLCKVGLNDSAKIVFDCMRSDGI-LPDSSILELLVSSYARMGKLDSAKNFLNEVHCY 173

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G     +    LL +       D+A+ +F E ++  +V D + F+IL+    + GE+DKA
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF-DKMTKSGFASDAAMYDVIIG 213
            E  + M +     +  ++  LI+GF + + + K   L  + M   G + D   Y  II 
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G CK   ++ A +L+ EM  SGI P+    + LI      G                   
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG------------------- 334

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                               N+  AM+  E          M+  G + P+  +F  +I+ 
Sbjct: 335 --------------------NMRSAMVMYEK---------MLLLGCL-PDVVTFTSLIDG 364

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             ++G+++  L L+ EM       NV+ Y  LI+ LC  NR+ E+   LR ++ S   P 
Sbjct: 365 YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            F  N +    C+   V  A  +V +M+ +   P     T+LI   C  G+ +EA     
Sbjct: 425 PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 454 DMVQEGFLPDIVCYSAAIGGLI 475
            M++   +PD +  ++ I  L+
Sbjct: 485 KMIEINCVPDEITINSLISCLL 506



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 52/381 (13%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +SP     L+  L    LV+EA +LF +   E   VP+ YS+N L+  LC+   +D    
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE--IIDHGWVDEHVFSILLVAF 145
             + M ++G   D  +   L+  +C   +  K   +  E  +I     D   ++ ++  +
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G++  A EL + M    I+ N+ TF VLI GF K   +  A+ +++KM   G   D 
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +  +I G C+  ++   L+L+ EMK   ++P                           
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP--------------------------- 388

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
             +V T  +L N+    L     I +A N L+ +   E                V P   
Sbjct: 389 --NVYTYAVLINA----LCKENRIREARNFLRHLKSSE----------------VVPKPF 426

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            ++ +I+   K GK+D A  +  EM +  C  +   +  LI G C   R+ E+     +M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486

Query: 386 EESGFKPTHFTLNSMFRCLCR 406
            E    P   T+NS+  CL +
Sbjct: 487 IEINCVPDEITINSLISCLLK 507


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 1/345 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           PN  S++ II+     G ++ A  +   M   G   + + Y +LI G+C   RLEE+  L
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             +M E G  P   T N++    C + D+  A +   +M  +G  P V    LL+  L  
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
            G+  EA   + +M ++G +PD + Y+  I G         A +L  ++ + G  P  V 
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  +I  L +  R+ EA+DLF +++ +G+ P V  +N +I+G C +GN+++A + L  M 
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM- 444

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           +++S  PD +T+ TL+ G C  G+ ++A ML +EM+ +G  P+ I++  LI+G  +    
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + A      M   G  P +  + ALI          LA E+LKEM
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 181/375 (48%), Gaps = 21/375 (5%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
           N+I+    S G+I+ A  +L AM +KG                 + P++ ++  +I+ + 
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKG-----------------IEPDSYTYGSLISGMC 254

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           K+G+L+ A  LF +M +IG + N   YN LIDG CN   LE ++    EM + G  P+  
Sbjct: 255 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 314

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           T N +   L     +  A +++++MR +G  P      +LI    + G A  AF    +M
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
           + +G  P  V Y++ I  L    R+  A +LF  I   G  PDV+ +N +I G C    V
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYT 574
             A  L  EM  K + P   T+N L+ G C+ G +++A + L  M  K  G  PD I+Y 
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM--KXRGIKPDHISYN 492

Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
           TLI G    G   DA  + +EM   G  P  +T+ ALI  LCK      A    + M  K
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552

Query: 635 GMKPDMFVFVALISA 649
           G+ PD   +++LI  
Sbjct: 553 GISPDDSTYLSLIEG 567



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 3/333 (0%)

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
           L +GKL  A      M  +G   NV  YN +I G  +   +E +  +L  M   G +P  
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLT 453
           +T  S+   +C+   +  A  L  KM   G  P  V +NTL I   C  G    AF +  
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL-IDGYCNKGDLERAFSYRD 302

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +MV++G +P +  Y+  +  L    R+  A ++ +++   G  PD + YNI+I+G  +  
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
               A DL NEM++KG+ P+  TY  LI    +   + +A     ++L+ +  SPDVI +
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVSPDVIMF 421

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
             +IDG C  G  + A ML  EM+ K   P+ +TF  L+ G C+  +   A +    MK 
Sbjct: 422 NAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481

Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           +G+KPD   +  LIS +    +   AF V  EM
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 27/408 (6%)

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G++ KA E I  M+    + N  ++  +IHG+  +  ++ A ++ D M   G   D+  Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
             +I G+CK  +LE A  L+ +M   G+ P+    + LI    ++G+L       + D  
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS--YRDEM 304

Query: 269 VNTMTLLCNSIMRILVS----NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
           V    +   S   +LV      G + +A ++++ M K               KG + P+ 
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK---------------KGII-PDA 348

Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
            +++I+IN   + G    A  L  EM   G       Y +LI  L   NR++E+ +L  +
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHG 443
           + + G  P     N+M    C   +V  A  L+++M  +   P  V  NTL+ +  C+ G
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM-QGRCREG 467

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  EA   L +M   G  PD + Y+  I G      +  A  +  ++ + G  P ++ YN
Sbjct: 468 KVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYN 527

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
            +I  LCK Q    AE+L  EM+ KG+ P  +TY  LI G    GN+D
Sbjct: 528 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---GNVD 572



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 180/387 (46%), Gaps = 28/387 (7%)

Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
           ++ ++  +S  G ++ A  +++ M    I  +  T+  LI G  K+ R+++A  LFDKM 
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 270

Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
           + G   +A  Y+ +I G C    LE A     EM   GI P     + L+ +   EG   
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330

Query: 255 ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVE 311
           E   ++KE+ +     D  T  +L N   R     G+  +A++L   M+           
Sbjct: 331 EADDMIKEMRKKGIIPDAITYNILINGYSRC----GNAKRAFDLHNEMLS---------- 376

Query: 312 MLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCN 371
                KG + P   ++  +I  L +  ++  A  LF ++   G   +V ++N +IDG C 
Sbjct: 377 -----KG-IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430

Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVK 430
           +  +E ++ LL+EM+     P   T N++ +  CR   V  A  L+ +M+ +G +P  + 
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490

Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
           +NT LI    + G   +AF    +M+  GF P ++ Y+A I  L   +  DLA EL +++
Sbjct: 491 YNT-LISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549

Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAE 517
              G  PD   Y  +I G+     + E
Sbjct: 550 VNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 179/374 (47%), Gaps = 22/374 (5%)

Query: 59  EGLCV-PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
           EGL   PN  SYN ++       +++     L  M+  G   D YT   L+   C  G+ 
Sbjct: 200 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 259

Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
           ++A  +F+++++ G V   V ++ L+  +   G++++A    + M    I  +  T+ +L
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319

Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
           +H    + R+ +A  +  +M K G   DA  Y+++I G  +    + A  L++EM   GI
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379

Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGSIDQAY 293
            P     + LI   S    +     +++E   D+ V+   ++ N+++    +NG++++A+
Sbjct: 380 EPTHVTYTSLIYVLSRRNRMK-EADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
            LL+ M                 + +V P+  +F+ ++    ++GK++ A  L  EM   
Sbjct: 439 MLLKEMD----------------RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
           G   +   YN LI G      +++++ +  EM   GF PT  T N++ +CLC+ Q+   A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 414 LNLVRKMRVQGHEP 427
             L+++M  +G  P
Sbjct: 543 EELLKEMVNKGISP 556



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 156/348 (44%), Gaps = 22/348 (6%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G LI  +   G +EEA+ LFD++   GL VPN  +YN L++  C    ++       EM 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGL-VPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVD 152
             G      T   L+      G+  +A  +  E+   G + D   ++IL+  +S+ G   
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L   M    I     T+  LI+   +++R+ +A  LF+K+   G + D  M++ +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDV 269
            G C N  +E A  L  EM    + PD    + L+     EG   E  +L+ E+ + R +
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM-KXRGI 484

Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
               +  N+++      G I  A+              V  EML I     +P   +++ 
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFX-------------VRDEMLSI---GFNPTLLTYNA 528

Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           +I  L K+ + DLA  L +EM   G   +   Y +LI+G+ N + L E
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 180/354 (50%), Gaps = 11/354 (3%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFRE-MTQI-GCMQNVFLYNNLIDGLCNSNRLEE 377
           + P+  + + +++ L K G++  AL+   + M+ + GC  N   YN LID  C    +  
Sbjct: 205 IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV---QGHEPWVKHNTL 434
           +YEL+ +ME  G      TLN++   LCR      AL   R+ R    +G    V ++TL
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324

Query: 435 LIKELCKH--GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           +   L  +  G AME F    + + EG  PD + Y   I GL    R++ A  +   +  
Sbjct: 325 VGALLHTNNVGMAMELFH---EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D  AYNI+I+G C+ +R+ EA +L  EM   G+ P V TYN L++G CK+G+   
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               L +M++ +   P VIT+ TL+ G C  G+ D+A+ +   M+E G  PN + +  LI
Sbjct: 442 VDELLGKMID-DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LCK      A+  F  MKEK +  ++  F AL+     +  P  AFE++ +M
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 203/444 (45%), Gaps = 24/444 (5%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGE----LTL 258
           D   ++ I+  L + + +    ++Y+ M+G + + PD      L+      G     L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L     +D D+    +  N+++  L  +G + +A                 VE  M    
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF--------------VEQRMSSVH 240

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PNT +++ +I+   + G + +A  L  +M   G  QN+   N ++ GLC + R   +
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300

Query: 379 YELLREMEE--SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            E  RE        K    T +++   L    +V  A+ L  +   +GH P       +I
Sbjct: 301 LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             L + G+  +A    + M + GF  D   Y+  I G    KR+  A EL +++   G  
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV  YN ++SG CKA   A  ++L  +MI  G  PSV T+  L++G+CK G ID+A+  
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           L  M   ESG  P+ + Y TLID LC  G  D AI L++EM+EK    N  TF AL+ GL
Sbjct: 481 LRSM--DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 616 CKCDRPRAALVHFRMMKEKGMKPD 639
              + P  A      M+E+   PD
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPD 562



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 209/466 (44%), Gaps = 32/466 (6%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           D   F+ +L A ++  +V     +   M  C ++R +  T+ +L++G  K  RV  AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 193 FDKMTKSGF--ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS--GITPDFEILSKLIT 248
            D M++       D    + ++ GLCK+ +++ AL    +   S  G  P+    + LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 249 SCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +    G +++  +  E  E+  V    +  N+I+  L   G    A    +         
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-------- 306

Query: 307 DVGVEMLMIFKGTVSP----NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                     K TV P    N  ++  ++  LL    + +A+ LF E    G   +  +Y
Sbjct: 307 ----------KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +I GL  + RLE++  +   M+E+GFK      N +    CR++ +  A  L+++M+ 
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416

Query: 423 QGHEPWV-KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            G  P V  +NTLL    CK G        L  M+ +G  P ++ +   + G   + ++D
Sbjct: 417 VGIRPDVCTYNTLLSGS-CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL + R +   G  P+ V YN +I  LCK   V  A +LF+EM  K +  +V T+N L+
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  +  N+ +    L   + +E   PD +T   L++ L + G  D
Sbjct: 536 KGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETD 580



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 188/427 (44%), Gaps = 30/427 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMD--DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            + IL+    K G V  A  +++ M   D +IR +  T   ++ G  K  RV +AL   +
Sbjct: 174 TYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVE 233

Query: 195 KMTKS--GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +   S  G   +   Y+ +I   C+   + MA +L  +M+  G+  +   L+ ++     
Sbjct: 234 QRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCR 293

Query: 253 EG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPI 305
            G      E     + +W +   N +T   ++++  L+   ++  A  L  + M +G   
Sbjct: 294 AGRTGAALEFFREKRTVWPEGKGNAVTY--STLVGALLHTNNVGMAMELFHEKMSEGH-- 349

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                          SP+   +  +I+ L + G+L+ A S+   M + G   +   YN L
Sbjct: 350 ---------------SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNIL 394

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I G C   RL E+YELL+EM+E G +P   T N++    C+  D      L+ KM   G 
Sbjct: 395 IAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGC 454

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +P V     L+   CK GK  EA R L  M + G  P+ V Y+  I  L     VDLA+E
Sbjct: 455 QPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIE 514

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF ++       +V  +N ++ GL       +A +L ++M  +   P   T ++L+    
Sbjct: 515 LFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLP 574

Query: 546 KSGNIDQ 552
             G  D+
Sbjct: 575 VIGETDR 581



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 32/396 (8%)

Query: 44  GLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           G V+EA    +Q +     C PN  +YNCL++A C+  ++ +    +++M++ G   +  
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 103 TLTPLLQVYCNSGQFDKALSVFNE---IIDHGWVDEHVFSILLVAFSKWGEVDKACELI- 158
           TL  ++   C +G+   AL  F E   +   G  +   +S L+ A      V  A EL  
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E+M + +   +   +  +I G  +  R++ A  +   M ++GF  D   Y+++I G C+ 
Sbjct: 343 EKMSEGH-SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTL 274
           K+L  A +L  EMK  GI PD    + L++     G+      LL K I +    + +T 
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              +++      G ID+A  +L++M                 +  + PN   ++ +I+ L
Sbjct: 462 --GTLVHGYCKVGKIDEALRILRSMD----------------ESGIHPNNVIYNTLIDFL 503

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +DLA+ LF EM +     NV  +N L+ GL + N  E+++EL+ +M E    P +
Sbjct: 504 CKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDY 563

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
            T++ +   L     V+G  + +++   QG     K
Sbjct: 564 VTVDVLMEWL----PVIGETDRLKRFMQQGEHTASK 595



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 41/209 (19%)

Query: 498 DVVAYN------------------------------------IIISGLCKAQRVAEAEDL 521
           DV A+N                                    I+++GLCKA RV +A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 522 FNEMITKGL--IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLID 578
            + M  + L   P V T N +++G CKSG + +A+  + + +    G  P+ +TY  LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE--KGM 636
             C  G    A  L  +ME +G   N +T   ++ GLC+  R  AAL  FR  +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKE 665
           K +   +  L+ A L   N  +A E+  E
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHE 343


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 201/457 (43%), Gaps = 53/457 (11%)

Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
           YD+++  LCK    + A  ++  M+  GI PD  IL  L++S +  G+L      + E  
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171

Query: 268 --DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
              +     + N+++ +LV    +D+A  L +  +  EP                 P+  
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPY--------------FVPDVY 215

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
           SF+I+I  L + G++D A   F+ M   GC  ++  YN LI+G C  N + + ++LL+E 
Sbjct: 216 SFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE- 274

Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
                                             M ++G  P V   T +I   CK G  
Sbjct: 275 ---------------------------------DMLIKGVSPDVITYTSIISGYCKLGDM 301

Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
             A     +MV  G  P+   ++  I G   +  +  A+ ++  +   GC PDVV +  +
Sbjct: 302 KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSL 361

Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
           I G C+   V +   L+ EM  + L P+V TY +LIN  CK   I +A   L R L+   
Sbjct: 362 IDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL-RHLKSSE 420

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
             P    Y  +IDG C AG+ D+A  +  EM+EK C P++ITF  LI G C   R   A+
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 626 VHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
             F  M E    PD     +LIS  L    P  A ++
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 200/466 (42%), Gaps = 51/466 (10%)

Query: 99  YDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACEL 157
           ++ Y L  L++  C  G  D A  VF+ +   G + D  +  +L+ ++++ G++D A   
Sbjct: 109 FNTYDL--LMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 158 IERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK 217
           +  +    I+++   +  L++  VK++ VD+A+ LF +  +  F  D   ++++I GLC+
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCN 277
             +++ A + +  M   G  PD                             + +   L N
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPD-----------------------------IVSYNTLIN 257

Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
              R+      I + ++LL+                M+ KG VSP+  ++  II+   K 
Sbjct: 258 GFCRV----NEISKGHDLLKED--------------MLIKG-VSPDVITYTSIISGYCKL 298

Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
           G +  A  LF EM   G   N F +N LIDG      +  +  +  +M   G  P   T 
Sbjct: 299 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTF 358

Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
            S+    CR  +V   L L  +M+V+   P V    +LI  LCK  +  EA  FL  +  
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
              +P    Y+  I G     +VD A  +  ++    C PD + + I+I G C   R+ E
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVE 478

Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
           A   F +MI    +P   T N LI+   K+G  ++A       L+K
Sbjct: 479 AISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 167/397 (42%), Gaps = 44/397 (11%)

Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
           T+    +   R+  SN SI Q Y+L  ++ +  P  D         +  +  + +    +
Sbjct: 2   TLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCD---------REIIRHSEAWLVKV 52

Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES-- 388
           + TL            FR  +   C    +L  NL   +        ++E+++   +   
Sbjct: 53  VCTLF-----------FRSHSLNACFG--YLSRNLNPSI--------AFEVIKRFSDPLL 91

Query: 389 -----GFKPTHFTLNSMF-------RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
                 F  TH ++N  F       R LC+      A  +   MR  G  P      LL+
Sbjct: 92  GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
               + GK   A  FL ++   G       Y+  +  L+    VD A+ LFR+       
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV ++NI+I GLC+   + +A + F  M   G  P + +YN LING+C+   I +    
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271

Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
           L   +  +  SPDVITYT++I G C  G    A  L++EM   G  PN  TF  LI G  
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331

Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
           K    R+A+V +  M   G  PD+  F +LI  +  E
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 192/442 (43%), Gaps = 52/442 (11%)

Query: 36  LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
           L+R L  VGL + A ++FD ++ +G+ +P++     L+ +  +   +D  +  L E+  Y
Sbjct: 115 LMRNLCKVGLNDSAKIVFDCMRSDGI-LPDSSILELLVSSYARMGKLDSAKNFLNEVHCY 173

Query: 96  GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
           G     +    LL +       D+A+ +F E ++  +V D + F+IL+    + GE+DKA
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233

Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF-DKMTKSGFASDAAMYDVIIG 213
            E  + M +     +  ++  LI+GF + + + K   L  + M   G + D   Y  II 
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
           G CK   ++ A +L+ EM  SGI P+    + LI      G                   
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG------------------- 334

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
                               N+  AM+  E          M+  G + P+  +F  +I+ 
Sbjct: 335 --------------------NMRSAMVMYEK---------MLLLGCL-PDVVTFTSLIDG 364

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             ++G+++  L L+ EM       NV+ Y  LI+ LC  NR+ E+   LR ++ S   P 
Sbjct: 365 YCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPK 424

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
            F  N +    C+   V  A  +V +M+ +   P     T+LI   C  G+ +EA     
Sbjct: 425 PFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFY 484

Query: 454 DMVQEGFLPDIVCYSAAIGGLI 475
            M++   +PD +  ++ I  L+
Sbjct: 485 KMIEINCVPDEITINSLISCLL 506



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 52/381 (13%)

Query: 28  MSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEM 87
           +SP     L+  L    LV+EA +LF +   E   VP+ YS+N L+  LC+   +D    
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 88  RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE--IIDHGWVDEHVFSILLVAF 145
             + M ++G   D  +   L+  +C   +  K   +  E  +I     D   ++ ++  +
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 146 SKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDA 205
            K G++  A EL + M    I+ N+ TF VLI GF K   +  A+ +++KM   G   D 
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 206 AMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE 265
             +  +I G C+  ++   L+L+ EMK   ++P                           
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP--------------------------- 388

Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
             +V T  +L N+    L     I +A N L+ +   E                V P   
Sbjct: 389 --NVYTYAVLINA----LCKENRIREARNFLRHLKSSE----------------VVPKPF 426

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
            ++ +I+   K GK+D A  +  EM +  C  +   +  LI G C   R+ E+     +M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486

Query: 386 EESGFKPTHFTLNSMFRCLCR 406
            E    P   T+NS+  CL +
Sbjct: 487 IEINCVPDEITINSLISCLLK 507


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 180/354 (50%), Gaps = 11/354 (3%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFRE-MTQI-GCMQNVFLYNNLIDGLCNSNRLEE 377
           + P+  + + +++ L K G++  AL+   + M+ + GC  N   YN LID  C    +  
Sbjct: 205 IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV---QGHEPWVKHNTL 434
           +YEL+ +ME  G      TLN++   LCR      AL   R+ R    +G    V ++TL
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324

Query: 435 LIKELCKH--GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           +   L  +  G AME F    + + EG  PD + Y   I GL    R++ A  +   +  
Sbjct: 325 VGALLHTNNVGMAMELFH---EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D  AYNI+I+G C+ +R+ EA +L  EM   G+ P V TYN L++G CK+G+   
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               L +M++ +   P VIT+ TL+ G C  G+ D+A+ +   M+E G  PN + +  LI
Sbjct: 442 VDELLGKMID-DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LCK      A+  F  MKEK +  ++  F AL+     +  P  AFE++ +M
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 203/444 (45%), Gaps = 24/444 (5%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGE----LTL 258
           D   ++ I+  L + + +    ++Y+ M+G + + PD      L+      G     L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L     +D D+    +  N+++  L  +G + +A                 VE  M    
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF--------------VEQRMSSVH 240

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PNT +++ +I+   + G + +A  L  +M   G  QN+   N ++ GLC + R   +
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300

Query: 379 YELLREMEE--SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            E  RE        K    T +++   L    +V  A+ L  +   +GH P       +I
Sbjct: 301 LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             L + G+  +A    + M + GF  D   Y+  I G    KR+  A EL +++   G  
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV  YN ++SG CKA   A  ++L  +MI  G  PSV T+  L++G+CK G ID+A+  
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           L  M   ESG  P+ + Y TLID LC  G  D AI L++EM+EK    N  TF AL+ GL
Sbjct: 481 LRSM--DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 616 CKCDRPRAALVHFRMMKEKGMKPD 639
              + P  A      M+E+   PD
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPD 562



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 209/466 (44%), Gaps = 32/466 (6%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           D   F+ +L A ++  +V     +   M  C ++R +  T+ +L++G  K  RV  AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 193 FDKMTKSGF--ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS--GITPDFEILSKLIT 248
            D M++       D    + ++ GLCK+ +++ AL    +   S  G  P+    + LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 249 SCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +    G +++  +  E  E+  V    +  N+I+  L   G    A    +         
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-------- 306

Query: 307 DVGVEMLMIFKGTVSP----NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                     K TV P    N  ++  ++  LL    + +A+ LF E    G   +  +Y
Sbjct: 307 ----------KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +I GL  + RLE++  +   M+E+GFK      N +    CR++ +  A  L+++M+ 
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416

Query: 423 QGHEPWV-KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            G  P V  +NTLL    CK G        L  M+ +G  P ++ +   + G   + ++D
Sbjct: 417 VGIRPDVCTYNTLLSGS-CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL + R +   G  P+ V YN +I  LCK   V  A +LF+EM  K +  +V T+N L+
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
            G  +  N+ +    L   + +E   PD +T   L++ L + G  D
Sbjct: 536 KGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETD 580



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 188/427 (44%), Gaps = 30/427 (7%)

Query: 137 VFSILLVAFSKWGEVDKACELIERMD--DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
            + IL+    K G V  A  +++ M   D +IR +  T   ++ G  K  RV +AL   +
Sbjct: 174 TYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVE 233

Query: 195 KMTKS--GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
           +   S  G   +   Y+ +I   C+   + MA +L  +M+  G+  +   L+ ++     
Sbjct: 234 QRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCR 293

Query: 253 EG------ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPI 305
            G      E     + +W +   N +T   ++++  L+   ++  A  L  + M +G   
Sbjct: 294 AGRTGAALEFFREKRTVWPEGKGNAVTY--STLVGALLHTNNVGMAMELFHEKMSEGH-- 349

Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
                          SP+   +  +I+ L + G+L+ A S+   M + G   +   YN L
Sbjct: 350 ---------------SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNIL 394

Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
           I G C   RL E+YELL+EM+E G +P   T N++    C+  D      L+ KM   G 
Sbjct: 395 IAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGC 454

Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
           +P V     L+   CK GK  EA R L  M + G  P+ V Y+  I  L     VDLA+E
Sbjct: 455 QPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIE 514

Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
           LF ++       +V  +N ++ GL       +A +L ++M  +   P   T ++L+    
Sbjct: 515 LFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLP 574

Query: 546 KSGNIDQ 552
             G  D+
Sbjct: 575 VIGETDR 581



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 32/397 (8%)

Query: 44  GLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           G V+EA    +Q +     C PN  +YNCL++A C+  ++ +    +++M++ G   +  
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 103 TLTPLLQVYCNSGQFDKALSVFNE---IIDHGWVDEHVFSILLVAFSKWGEVDKACELI- 158
           TL  ++   C +G+   AL  F E   +   G  +   +S L+ A      V  A EL  
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E+M + +   +   +  +I G  +  R++ A  +   M ++GF  D   Y+++I G C+ 
Sbjct: 343 EKMSEGH-SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTL 274
           K+L  A +L  EMK  GI PD    + L++     G+      LL K I +    + +T 
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              +++      G ID+A  +L++M                 +  + PN   ++ +I+ L
Sbjct: 462 --GTLVHGYCKVGKIDEALRILRSMD----------------ESGIHPNNVIYNTLIDFL 503

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +DLA+ LF EM +     NV  +N L+ GL + N  E+++EL+ +M E    P +
Sbjct: 504 CKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDY 563

Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
            T++ +   L     V+G  + +++   QG     K 
Sbjct: 564 VTVDVLMEWL----PVIGETDRLKRFMQQGEHTASKR 596



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 41/209 (19%)

Query: 498 DVVAYN------------------------------------IIISGLCKAQRVAEAEDL 521
           DV A+N                                    I+++GLCKA RV +A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 522 FNEMITKGL--IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLID 578
            + M  + L   P V T N +++G CKSG + +A+  + + +    G  P+ +TY  LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE--KGM 636
             C  G    A  L  +ME +G   N +T   ++ GLC+  R  AAL  FR  +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKE 665
           K +   +  L+ A L   N  +A E+  E
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHE 343


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 27/443 (6%)

Query: 188 KALQLFDKMTKSGFASDAAMYDV--IIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILS 244
            AL +F  +  S  +   + +    II  LC++ +   ALQL+ +M    G +PD   LS
Sbjct: 123 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 182

Query: 245 KLITSCSD----EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            L++SC+     +   TLL K    +          N +M  L+  G +     L +  I
Sbjct: 183 FLVSSCTCANLLDASATLLSKA--SEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 240

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                   SP+  SF+++I  + + G++  AL L   M + GC  +  
Sbjct: 241 QDR---------------LYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV 285

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +N ++DGLC +N +   +E+LR ++  G   P   T  S+    C+   +  A+ +   
Sbjct: 286 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYND 345

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P      +LI    K G    A      M +    PD+V +S+ I G     +
Sbjct: 346 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 405

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-ITKGLIPSVATYN 538
           +D AL ++ D+  H   P+V  ++III  LCK  R  EA  L NE+ +   + P    YN
Sbjct: 406 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYN 465

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +I+  CK G +D+A L + + +E++   PD  TYT LI G C+  R  +AIM ++EM E
Sbjct: 466 PVIDVLCKCGKVDEANL-IRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 524

Query: 599 KGCAPNRITFMALITGLCKCDRP 621
            GC+P+ IT    I+ L K   P
Sbjct: 525 AGCSPDSITVNCFISCLLKAGMP 547



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 2/333 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLRE 384
           +++ ++++L+  G++   ++LF    Q      +V+ +N +I G+C   +++++ EL+  
Sbjct: 215 AYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVER 274

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHG 443
           M E G  P   T N +   LCR  +V     ++R+++  G   P V   T +I   CK G
Sbjct: 275 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +A     DMV  G +P+ V Y+  I G   +  +  A+E+++ +    C PDVV ++
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I G C+  ++ +A  ++++M    + P+V T++++I+  CK    D+A+  L+ +  +
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +P    Y  +ID LC  G+ D+A ++   MEEKGC P++ T+  LI G C   R   
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 514

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           A++ F  M E G  PD       IS  L    P
Sbjct: 515 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 547



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 171/325 (52%), Gaps = 7/325 (2%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           +++P+  S   II  L + G+   AL LF +M T  G   +    + L+     +N L+ 
Sbjct: 137 SITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDA 196

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHEPWVKHNTLLI 436
           S  LL +  E G +   +  N +   L  R  V   + L  R ++ + + P V    ++I
Sbjct: 197 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVI 256

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
           K +C+ G+  +A   +  M + G  PD V ++  + GL     V    E+ R +   G C
Sbjct: 257 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 316

Query: 497 -PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
            P+VV +  +ISG CKA ++ +A  ++N+M+  G++P+  TYN+LING+ K G++  A+ 
Sbjct: 317 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 376

Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
              +M       PDV+T+++LIDG C  G+ DDA+ +W++M +    PN  TF  +I  L
Sbjct: 377 VYQQMTRLRC-PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSL 435

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDM 640
           CK +R   A+   R++ E  ++PD+
Sbjct: 436 CKQNRSDEAI---RLLNELNLRPDI 457



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 195/455 (42%), Gaps = 55/455 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDH-GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
           ++ V C SG+   AL +F+++  H G+  D    S L+ + +    +D +  L+ +  + 
Sbjct: 148 IIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEF 207

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQLEM 223
             R+    +  L+   + + RV   + LF++  +   ++ D   ++V+I G+C+  Q++ 
Sbjct: 208 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQK 267

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           AL+L   M   G +PD                                 T+  N I+  L
Sbjct: 268 ALELVERMNEFGCSPD---------------------------------TVTHNIIVDGL 294

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                + + + +L+ + +                G   PN  +F  +I+   K GKL+ A
Sbjct: 295 CRTNEVSRGHEVLRRLQR---------------DGVCMPNVVTFTSVISGYCKAGKLEDA 339

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           ++++ +M   G M N   YN LI+G      L  + E+ ++M      P   T +S+   
Sbjct: 340 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 399

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLP 462
            CR   +  AL +   M     +P V   +++I  LCK  ++ EA R L ++ ++    P
Sbjct: 400 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAP 459

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
               Y+  I  L    +VD A  + + +   GC PD   Y I+I G C   R++EA   F
Sbjct: 460 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 519

Query: 523 NEMITKGLIPSVATYNLLINGWCKSG---NIDQAM 554
           +EM+  G  P   T N  I+   K+G    +D  M
Sbjct: 520 HEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 554



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 161/363 (44%), Gaps = 21/363 (5%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C +   A   L+  L   G V +   LF++  ++ L  P+ +S+N +++ +C+   V   
Sbjct: 209 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKA 268

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
              ++ M ++G   D  T   ++   C + +  +   V   +   G    +V  F+ ++ 
Sbjct: 269 LELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 328

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            + K G+++ A  +   M    I  N  T+ VLI+G+ K   +  A++++ +MT+     
Sbjct: 329 GYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 388

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLV 260
           D   +  +I G C+  QL+ AL+++S+M    I P+    S +I S   +    E   L+
Sbjct: 389 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLL 448

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            E+    D+     + N ++ +L   G +D+A NL++   KG           M  KG  
Sbjct: 449 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA-NLIR---KG-----------MEEKG-C 492

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  ++ I+I       ++  A+  F EM + GC  +    N  I  L  +    E   
Sbjct: 493 RPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDH 552

Query: 381 LLR 383
           ++R
Sbjct: 553 VMR 555



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 2/170 (1%)

Query: 483 ALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           AL+LF  +  H G  PD    + ++S    A  +  +  L ++    G       YN L+
Sbjct: 161 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 220

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +     G +   +    R ++    SPDV ++  +I G+C  G+   A+ L   M E GC
Sbjct: 221 SSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 280

Query: 602 APNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +P+ +T   ++ GLC+ +   R   V  R+ ++    P++  F ++IS +
Sbjct: 281 SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGY 330



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%)

Query: 20  DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
           D+ + R   +      +I  L      +EA  L +++       P  + YN +++ LCK 
Sbjct: 415 DMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKC 474

Query: 80  CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
             VD   +  K M++ G   DKYT T L+  YC   +  +A+  F+E+++ G
Sbjct: 475 GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 526


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 158/307 (51%), Gaps = 1/307 (0%)

Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
           A++ F  M  +      FL+NN++  L  + R      L ++ E +G  P   TL+ +  
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
           C C    +  A ++   +  +G+ P       LIK LC  G+   A  F   +V +GF  
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
           D V Y   I GL           L R +  H   PD+V Y  II  LCK + + +A DL+
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224

Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
           +EMI KG+ P+V TY  LI+G+C  GN+ +A   L+ M  K   +PDV T+  LID L  
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNI-NPDVYTFNILIDALAK 283

Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
            G+ D+A+ L+ EM+ K   PN +T+ +LI GLCK      A+   + MKE+G++P+++ 
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343

Query: 643 FVALISA 649
           +  L+ A
Sbjct: 344 YTILLDA 350



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 196/448 (43%), Gaps = 50/448 (11%)

Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
           A+  F++M          +++ I+  L KNK+    + L+ + + +GITPD         
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDL-------- 96

Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
            C                    T+++L N    +      I  A+++             
Sbjct: 97  -C--------------------TLSILINCFCHL----THITFAFSVFAN---------- 121

Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
                 I K    PN  + + +I  L   G++  AL    ++   G   +   Y  LI+G
Sbjct: 122 ------ILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLING 175

Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
           LC +   +    LLR++E    KP      ++  CLC+ + +  A +L  +M V+G  P 
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPN 235

Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
           V   T LI   C  G   EAF  L +M  +   PD+  ++  I  L    ++D A+ LF 
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295

Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
           ++      P++V Y  +I GLCK   +  A  L  +M  +G+ P+V +Y +L++  CK G
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355

Query: 549 NIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
            ++ A      +L K     +V TY  +I+GLC AG   D + L ++ME KGC PN ITF
Sbjct: 356 RLENAKQFFQHLLVK-GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITF 414

Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGM 636
             +I  L + D    A    R M  +G+
Sbjct: 415 KTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 166/329 (50%), Gaps = 3/329 (0%)

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P T  F+ I+++L+K+ +    +SLF++    G   ++   + LI+  C+   +  ++ +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELC 440
              + + G+ P   TLN++ + LC   ++  AL+   K+  QG +   V + TL I  LC
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTL-INGLC 177

Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
           K G+     R L  +      PD+V Y+  I  L   K +  A +L+ ++   G  P+V 
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
            Y  +I G C    + EA  L NEM  K + P V T+N+LI+   K G ID+AM     M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
             K    P+++TYT+LIDGLC     + AI L  +M+E+G  PN  ++  L+  LCK  R
Sbjct: 298 KHKNM-FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356

Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISA 649
              A   F+ +  KG   ++  +  +I+ 
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMING 385



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 182/468 (38%), Gaps = 83/468 (17%)

Query: 64  PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
           P  + +N +L +L K+     V    K+ +  G   D  TL+ L+  +C+      A SV
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 124 FNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
           F  I+  G+                                    N  T   LI G    
Sbjct: 119 FANILKRGY----------------------------------HPNAITLNTLIKGLCFC 144

Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
             + +AL   DK+   GF  D   Y  +I GLCK  + +   +L  +++G  + PD    
Sbjct: 145 GEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDL--- 201

Query: 244 SKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
                                         ++  +I+  L  N  +  A +L   MI   
Sbjct: 202 ------------------------------VMYTTIIHCLCKNKLLGDACDLYSEMI--- 228

Query: 304 PIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYN 363
                        KG +SPN  ++  +I+     G L  A SL  EM       +V+ +N
Sbjct: 229 ------------VKG-ISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFN 275

Query: 364 NLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ 423
            LID L    +++E+  L  EM+     P   T  S+   LC+   +  A+ L +KM+ Q
Sbjct: 276 ILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 335

Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
           G +P V   T+L+  LCK G+   A +F   ++ +G+  ++  Y+  I GL         
Sbjct: 336 GIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV 395

Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
           ++L   +   GC P+ + +  II  L +     +AE    EMI +GL+
Sbjct: 396 MDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 4/258 (1%)

Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
           D V + N  R + ++   P    N +L   L K+ +              G  PD+   S
Sbjct: 44  DAVASFN--RMLLMRPPPPTFLFNNIL-SSLVKNKRYPTVISLFKQFEPNGITPDLCTLS 100

Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
             I     +  +  A  +F +I   G  P+ +  N +I GLC    +  A    ++++ +
Sbjct: 101 ILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ 160

Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
           G      +Y  LING CK+G   +A+  L R LE  S  PD++ YTT+I  LC      D
Sbjct: 161 GFQLDQVSYGTLINGLCKAGE-TKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGD 219

Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
           A  L++EM  KG +PN  T+  LI G C     + A      MK K + PD++ F  LI 
Sbjct: 220 ACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILID 279

Query: 649 AFLSELNPPLAFEVLKEM 666
           A   E     A  + +EM
Sbjct: 280 ALAKEGKIDEAMSLFEEM 297



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 167/376 (44%), Gaps = 20/376 (5%)

Query: 52  LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
           LF Q +  G+  P+  + + L+   C    +         +   G+  +  TL  L++  
Sbjct: 83  LFKQFEPNGI-TPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGL 141

Query: 112 CNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNE 170
           C  G+  +AL   ++++  G+ +D+  +  L+    K GE      L+ +++  +++ + 
Sbjct: 142 CFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDL 201

Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
             +  +IH   K   +  A  L+ +M   G + +   Y  +I G C    L+ A  L +E
Sbjct: 202 VMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNE 261

Query: 231 MKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGS 288
           MK   I PD    + LI + + EG++   + + E  + +++    +   S++  L  N  
Sbjct: 262 MKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHH 321

Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
           +++A  L + M       + G++          PN  S+ I+++ L K G+L+ A   F+
Sbjct: 322 LERAIALCKKM------KEQGIQ----------PNVYSYTILLDALCKGGRLENAKQFFQ 365

Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
            +   G   NV  YN +I+GLC +    +  +L  +ME  G  P   T  ++   L  + 
Sbjct: 366 HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKD 425

Query: 409 DVVGALNLVRKMRVQG 424
           +   A   +R+M  +G
Sbjct: 426 ENDKAEKFLREMIARG 441



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 24/331 (7%)

Query: 32  ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
            L  LI+ L   G ++ A    D+V  +G  + +  SY  L+  LCK+     V   L++
Sbjct: 133 TLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL-DQVSYGTLINGLCKAGETKAVARLLRK 191

Query: 92  MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWG 149
           ++ +    D    T ++   C +     A  +++E+I  G +  +VF+   L+  F   G
Sbjct: 192 LEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG-ISPNVFTYTTLIHGFCIMG 250

Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
            + +A  L+  M   NI  +  TF +LI    K+ ++D+A+ LF++M       +   Y 
Sbjct: 251 NLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYT 310

Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
            +I GLCKN  LE A+ L  +MK  GI P+    + L+ +    G L    K+ ++    
Sbjct: 311 SLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLEN-AKQFFQ---- 365

Query: 270 NTMTLLCNSIMRILVSNGSID-QAYN-LLQAMIKGEPIADV-GVEMLMIFKGTVSPNTSS 326
                       +LV    ++ + YN ++  + K     DV  ++  M  KG + PN  +
Sbjct: 366 -----------HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM-PNAIT 413

Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
           F  II  LL+  + D A    REM   G ++
Sbjct: 414 FKTIICALLEKDENDKAEKFLREMIARGLLK 444


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 171/324 (52%), Gaps = 2/324 (0%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
           +SP+   ++ ++N   K G++     L+  M + G  +NV  +N ++ GL N+  ++E +
Sbjct: 21  ISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGS-RNVASFNTMMRGLFNNGEVDEVF 79

Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
            +   M+ESGF     T   +    C+      +L+++   + +G        + +I  L
Sbjct: 80  SIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGL 139

Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
           CK GK  +A   L  M++ G  P+   Y+A I GL+   + + A+ +F+++    C P +
Sbjct: 140 CKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTI 199

Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
           V YN +I+GLCK +R AEA DL  EM+ KG  PSV TY+LLI G C+   ++ A+   ++
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQ 259

Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
           ++ K    PDV  +  LI GLC  G+ + A  L+ +M    CAPN +T+  L+ G  K  
Sbjct: 260 VISK-GFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGG 318

Query: 620 RPRAALVHFRMMKEKGMKPDMFVF 643
             R ALV +  +   G+ PD+  +
Sbjct: 319 DTRNALVIWARILRNGLLPDIISY 342



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 196/394 (49%), Gaps = 20/394 (5%)

Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
           C++  +  A ++Y EM  S I+PD  + + ++      G +     ++WE   R+ +   
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCF-DLWELMGREGSRNV 59

Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
              N++MR L +NG +D+ +++ + M +   + D                ++++ I+++ 
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVED----------------STTYGILVHG 103

Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
             K+G  + +L +     Q G   + F Y+ +I GLC   +L+++  +L  M ESG KP 
Sbjct: 104 FCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPN 163

Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
               N++   L        A+ + +++  +   P +     LI  LCK  +  EA+  + 
Sbjct: 164 TQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVK 223

Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
           +M+++G+ P ++ YS  I GL    +V++AL+L+  + + G  PDV  +NI+I GLC   
Sbjct: 224 EMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVG 283

Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
           +   A +L+ +M      P++ TYN L+ G+ K G+   A++  +R+L +    PD+I+Y
Sbjct: 284 KTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARIL-RNGLLPDIISY 342

Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
              + GLC   R   AI+  N+   K   P  IT
Sbjct: 343 NITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 2/315 (0%)

Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
           + G ++ A  +++EM +     +  +YN +++G   + R++  ++L   M   G +    
Sbjct: 2   ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA- 60

Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
           + N+M R L    +V    ++   M+  G         +L+   CK+G   ++   L   
Sbjct: 61  SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
            QEG   D   YSA I GL  + ++D A+ +   +   GC P+   YN +I+GL  A + 
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180

Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
            +A  +F E+ T+   P++ TYN LING CK     +A   +  MLEK   +P VITY+ 
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEK-GWNPSVITYSL 239

Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
           LI GLC   + + A+ LWN++  KG  P+      LI GLC   +   A   +  M    
Sbjct: 240 LIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWN 299

Query: 636 MKPDMFVFVALISAF 650
             P++  +  L+  F
Sbjct: 300 CAPNLVTYNTLMEGF 314



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 133/297 (44%), Gaps = 2/297 (0%)

Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
           C S  +  +  + +EM ES   P     N+M     +   +    +L   M  +G     
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60

Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
             NT++ + L  +G+  E F     M + GF+ D   Y   + G       + +L +   
Sbjct: 61  SFNTMM-RGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
               G   D  AY+ +ISGLCK  ++ +A  + N MI  G  P+   YN LING   +  
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
            + A+     +  +   SP ++TY TLI+GLC   R  +A  L  EM EKG  P+ IT+ 
Sbjct: 180 FEDAIRVFKELGTRHC-SPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYS 238

Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
            LI GLC+  +   AL  +  +  KG KPD+ +   LI    S      A E+  +M
Sbjct: 239 LLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDM 295



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 176/391 (45%), Gaps = 18/391 (4%)

Query: 77  CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
           C+S +++  E   KEM +     D      +L  +  +G+      ++  +   G  +  
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVA 60

Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
            F+ ++      GEVD+   + E M +     +  T+ +L+HGF K    +K+L + +  
Sbjct: 61  SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120

Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
            + G A DA  Y  +I GLCK  +L+ A+ + + M  SG  P+ ++ + LI       + 
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180

Query: 257 TLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
              ++   E   R  +   +  N+++  L       +AY+L++ M++             
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLE------------- 227

Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
             KG  +P+  ++ ++I  L +D K+++AL L+ ++   G   +V ++N LI GLC+  +
Sbjct: 228 --KGW-NPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284

Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
            E + EL  +M      P   T N++     +  D   AL +  ++   G  P +    +
Sbjct: 285 TEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNI 344

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
            +K LC   +   A  FL D V +  +P ++
Sbjct: 345 TLKGLCACNRISVAILFLNDAVTKNIVPTVI 375



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 2/223 (0%)

Query: 34  GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQ 93
           G L+      G   ++  + +  K+EG  + + ++Y+ ++  LCK   +D     L  M 
Sbjct: 98  GILVHGFCKNGYNNKSLHVLEIAKQEGGAL-DAFAYSAMISGLCKMGKLDKAVSVLNGMI 156

Query: 94  DYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVD 152
           + G   +      L+     + +F+ A+ VF E+   H       ++ L+    K     
Sbjct: 157 ESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFA 216

Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
           +A +L++ M +     +  T+ +LI G  +  +V+ ALQL++++   GF  D  M++++I
Sbjct: 217 EAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILI 276

Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
            GLC   + E A +LY +M      P+    + L+      G+
Sbjct: 277 HGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGD 319


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 180/354 (50%), Gaps = 11/354 (3%)

Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFRE-MTQI-GCMQNVFLYNNLIDGLCNSNRLEE 377
           + P+  + + +++ L K G++  AL+   + M+ + GC  N   YN LID  C    +  
Sbjct: 205 IRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV---QGHEPWVKHNTL 434
           +YEL+ +ME  G      TLN++   LCR      AL   R+ R    +G    V ++TL
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324

Query: 435 LIKELCKH--GKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
           +   L  +  G AME F    + + EG  PD + Y   I GL    R++ A  +   +  
Sbjct: 325 VGALLHTNNVGMAMELFH---EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
            G   D  AYNI+I+G C+ +R+ EA +L  EM   G+ P V TYN L++G CK+G+   
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
               L +M++ +   P VIT+ TL+ G C  G+ D+A+ +   M+E G  PN + +  LI
Sbjct: 442 VDELLGKMID-DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
             LCK      A+  F  MKEK +  ++  F AL+     +  P  AFE++ +M
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQM 554



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 210/456 (46%), Gaps = 25/456 (5%)

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKG-SGITPDFEILSKLITSCSDEGE----LTL 258
           D   ++ I+  L + + +    ++Y+ M+G + + PD      L+      G     L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
           L     +D D+    +  N+++  L  +G + +A                 VE  M    
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF--------------VEQRMSSVH 240

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
              PNT +++ +I+   + G + +A  L  +M   G  QN+   N ++ GLC + R   +
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300

Query: 379 YELLREMEE--SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
            E  RE        K    T +++   L    +V  A+ L  +   +GH P       +I
Sbjct: 301 LEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
             L + G+  +A    + M + GF  D   Y+  I G    KR+  A EL +++   G  
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
           PDV  YN ++SG CKA   A  ++L  +MI  G  PSV T+  L++G+CK G ID+A+  
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 557 LSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
           L  M   ESG  P+ + Y TLID LC  G  D AI L++EM+EK    N  TF AL+ GL
Sbjct: 481 LRSM--DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538

Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
              + P  A      M+E+   PD +V V ++  +L
Sbjct: 539 RDKNMPEKAFELMDQMREERCFPD-YVTVDVLMEWL 573



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 207/461 (44%), Gaps = 32/461 (6%)

Query: 134 DEHVFSILLVAFSKWGEVDKACELIERMDDC-NIRLNEKTFCVLIHGFVKKSRVDKALQL 192
           D   F+ +L A ++  +V     +   M  C ++R +  T+ +L++G  K  RV  AL++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 193 FDKMTKSGF--ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS--GITPDFEILSKLIT 248
            D M++       D    + ++ GLCK+ +++ AL    +   S  G  P+    + LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 249 SCSDEGELTLLVK--EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
           +    G +++  +  E  E+  V    +  N+I+  L   G    A    +         
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE-------- 306

Query: 307 DVGVEMLMIFKGTVSP----NTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
                     K TV P    N  ++  ++  LL    + +A+ LF E    G   +  +Y
Sbjct: 307 ----------KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356

Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
             +I GL  + RLE++  +   M+E+GFK      N +    CR++ +  A  L+++M+ 
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416

Query: 423 QGHEPWV-KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
            G  P V  +NTLL    CK G        L  M+ +G  P ++ +   + G   + ++D
Sbjct: 417 VGIRPDVCTYNTLLSGS-CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
            AL + R +   G  P+ V YN +I  LCK   V  A +LF+EM  K +  +V T+N L+
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
            G  +  N+ +    L   + +E   PD +T   L++ L +
Sbjct: 536 KGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPV 575



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 28/370 (7%)

Query: 44  GLVEEANMLFDQ-VKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
           G V+EA    +Q +     C PN  +YNCL++A C+  ++ +    +++M++ G   +  
Sbjct: 223 GRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIV 282

Query: 103 TLTPLLQVYCNSGQFDKALSVFNE---IIDHGWVDEHVFSILLVAFSKWGEVDKACELI- 158
           TL  ++   C +G+   AL  F E   +   G  +   +S L+ A      V  A EL  
Sbjct: 283 TLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
           E+M + +   +   +  +I G  +  R++ A  +   M ++GF  D   Y+++I G C+ 
Sbjct: 343 EKMSEGH-SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRK 401

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTL 274
           K+L  A +L  EMK  GI PD    + L++     G+      LL K I +    + +T 
Sbjct: 402 KRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITF 461

Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
              +++      G ID+A  +L++M                 +  + PN   ++ +I+ L
Sbjct: 462 --GTLVHGYCKVGKIDEALRILRSMD----------------ESGIHPNNVIYNTLIDFL 503

Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
            K G +DLA+ LF EM +     NV  +N L+ GL + N  E+++EL+ +M E    P +
Sbjct: 504 CKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDY 563

Query: 395 FTLNSMFRCL 404
            T++ +   L
Sbjct: 564 VTVDVLMEWL 573



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 41/209 (19%)

Query: 498 DVVAYN------------------------------------IIISGLCKAQRVAEAEDL 521
           DV A+N                                    I+++GLCKA RV +A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 522 FNEMITKGL--IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLID 578
            + M  + L   P V T N +++G CKSG + +A+  + + +    G  P+ +TY  LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE--KGM 636
             C  G    A  L  +ME +G   N +T   ++ GLC+  R  AAL  FR  +      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 637 KPDMFVFVALISAFLSELNPPLAFEVLKE 665
           K +   +  L+ A L   N  +A E+  E
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHE 343


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 88/454 (19%)

Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
           NS++ +++  G   +A      +I  + +             ++SPN  +F+++I  + K
Sbjct: 165 NSVLNVIIQEGLFHRALEFYNHVIGAKGV-------------SISPNVLTFNLVIKAMCK 211

Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
            G +D A+ +FR+MT   C  +V+ Y  L+DGLC ++R++E+  LL EM+  G  P+  T
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271

Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDM 455
            N +   LC++ D+  A  LV  M ++G  P  V +NTL I  LC  GK  +A   L  M
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL-IHGLCLKGKLEKAISLLDRM 330

Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRV----------------------------------- 480
           V    +P++V Y   I GL+   R                                    
Sbjct: 331 VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKS 390

Query: 481 DLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT---- 536
             A+ LF+++   G   + + Y+ +I GLC+  +  +A ++ +EM  KG  P+  T    
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSL 450

Query: 537 -------------------------------YNLLINGWCKSGNIDQAMLCLSRMLEKES 565
                                          Y++LI+G CK G + +AM+  ++ML K  
Sbjct: 451 MKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGK-G 509

Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG--CAPNRITFMALITGLCKCDRPRA 623
             PDV+ Y+++I+GL IAG  +DA+ L+NEM  +G    P+ +T+  L+  LCK      
Sbjct: 510 CKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISR 569

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
           A+     M ++G  PD+      +     +L+PP
Sbjct: 570 AIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPP 603



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 204/444 (45%), Gaps = 50/444 (11%)

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
           +I  N  TF ++I    K   VD A+Q+F  MT      D   Y  ++ GLCK  +++ A
Sbjct: 194 SISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEA 253

Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
           + L  EM+  G  P     + LI     +G+L+   K                     LV
Sbjct: 254 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAK---------------------LV 292

Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
            N                           M  KG + PN  +++ +I+ L   GKL+ A+
Sbjct: 293 DN---------------------------MFLKGCI-PNEVTYNTLIHGLCLKGKLEKAI 324

Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
           SL   M    C+ NV  Y  +I+GL    R  +   +L  MEE G+    +  +++   L
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGL 384

Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
            +      A++L ++M V+G+E      + +I  LC+ GK  +A   L++M  +G  P+ 
Sbjct: 385 FKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNA 444

Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
              S+ + G  +      A+E+++D+  H    + V Y+++I GLCK  +V EA  ++ +
Sbjct: 445 YTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQ 504

Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML-EKESGSPDVITYTTLIDGLCIA 583
           M+ KG  P V  Y+ +ING   +G ++ AM   + ML +     PDV+TY  L++ LC  
Sbjct: 505 MLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQ 564

Query: 584 GRPDDAIMLWNEMEEKGCAPNRIT 607
                AI L N M ++GC P+ +T
Sbjct: 565 SSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 213/453 (47%), Gaps = 36/453 (7%)

Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWV----DEHVFSILLVAFSKWGEVDKACELI 158
           +   +L V    G F +AL  +N +I    V    +   F++++ A  K G VD A ++ 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
             M       +  T+C L+ G  K  R+D+A+ L D+M   G       ++V+I GLCK 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNS 278
             L  A +L   M   G  P+    + LI     +G+L   +  +  DR V++  +  N 
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLL--DRMVSSKCVP-NV 339

Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
           +    + NG + Q          G  +    V  LM  +G    N   +  +I+ L K+G
Sbjct: 340 VTYGTIINGLVKQ----------GRALDGACVLALMEERGYCV-NEYVYSTLISGLFKEG 388

Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
           K   A+ LF+EMT  G   N  +Y+ +IDGLC   + +++ E+L EM   G  P  +T +
Sbjct: 389 KSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCS 448

Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN--------TLLIKELCKHGKAMEAFR 450
           S+ +      +   A+ + + M         KHN        ++LI  LCK GK  EA  
Sbjct: 449 SLMKGFFEAGNSHRAVEVWKDM--------AKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500

Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG--CCPDVVAYNIIISG 508
             T M+ +G  PD+V YS+ I GL     V+ A++L+ ++   G    PDVV YNI+++ 
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNT 560

Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           LCK   ++ A DL N M+ +G  P + T  + +
Sbjct: 561 LCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL 593



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 227/498 (45%), Gaps = 44/498 (8%)

Query: 28  MSPGALGF--LIRCLGSVGLVEEANMLF-DQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
           +SP  L F  +I+ +  VGLV++A  +F D   R+  C P+ Y+Y  L++ LCK+  +D 
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRK--CEPDVYTYCTLMDGLCKADRIDE 252

Query: 85  VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV 143
               L EMQ  G      T   L+   C  G   +A  + + +   G + +E  ++ L+ 
Sbjct: 253 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIH 312

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
                G+++KA  L++RM       N  T+  +I+G VK+ R      +   M + G+  
Sbjct: 313 GLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCV 372

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
           +  +Y  +I GL K  + + A+ L+ EM   G   +  + S +I     +G+    V+ +
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVL 432

Query: 264 WE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
            E  ++        C+S+M+     G+  +A  + + M                 K   +
Sbjct: 433 SEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA----------------KHNFT 476

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
            N   + ++I+ L KDGK+  A+ ++ +M   GC  +V  Y+++I+GL  +  +E++ +L
Sbjct: 477 QNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQL 536

Query: 382 LREM--EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
             EM  +    +P   T N +   LC++  +  A++L+  M  +G +P +   T+ ++ L
Sbjct: 537 YNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596

Query: 440 CKHGKAMEAFRFLTDMVQEG--FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
                     R   D  Q+G  FL ++V        L+  +RV  A ++   +      P
Sbjct: 597 ----------REKLDPPQDGREFLDELVVR------LLKRQRVLGASKIVEVMLQKLLPP 640

Query: 498 DVVAYNIIISGLCKAQRV 515
               +  ++  LCK ++V
Sbjct: 641 KHSTWARVVENLCKPKKV 658



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 144/336 (42%), Gaps = 41/336 (12%)

Query: 5   LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
           L +A RI     L  ++    CF SP     LI  L   G +  A  L D +  +G C+P
Sbjct: 244 LCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKG-CIP 302

Query: 65  NNYSYNCLLEALC-----------------KSCSVDLVEMR------------------L 89
           N  +YN L+  LC                   C  ++V                     L
Sbjct: 303 NEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL 362

Query: 90  KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKW 148
             M++ G+  ++Y  + L+      G+  +A+ +F E+   G+ ++  V+S ++    + 
Sbjct: 363 ALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRD 422

Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
           G+ D A E++  M +     N  T   L+ GF +     +A++++  M K  F  +   Y
Sbjct: 423 GKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCY 482

Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG----ELTLLVKEIW 264
            V+I GLCK+ +++ A+ ++++M G G  PD    S +I   S  G     + L  + + 
Sbjct: 483 SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLC 542

Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
           +  D     +  N ++  L    SI +A +LL +M+
Sbjct: 543 QGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSML 578


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/585 (24%), Positives = 257/585 (43%), Gaps = 54/585 (9%)

Query: 84  LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILL 142
             EM +   +D  WG          QV   +G   +A  +F++++ +G V      ++ L
Sbjct: 156 FTEMLIYTYKD--WGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFL 213

Query: 143 VAFS-KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF 201
              S  +  +  A ++ E   +  +  N  +  +++H   +  +V +A  L  +MT  G 
Sbjct: 214 SRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGN 273

Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK 261
             D   Y V++ G C+  +L+  L+L  E+KG G+ PD                      
Sbjct: 274 FPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPD---------------------- 311

Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
                        + N+I+ +L  NG + +A  LL+ M K                  V 
Sbjct: 312 -----------EYIYNNIILLLCKNGEVVEAEQLLRGMRKW----------------GVF 344

Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
           P+   +  +I+   K G +  A  LF EM +   + ++  Y ++I G+C S ++ E+ E+
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
             EM   G +P   T  ++    C+  ++  A ++  +M  +G  P V   T L   LCK
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
           +G+   A   L +M ++G  P++  Y+  + GL  I  ++  ++L  ++   G  PD + 
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
           Y  ++   CK   +A+A +L   M+ K L P++ T+N+L+NG+C SG ++     +  ML
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
           EK    P+  T+ +L+   CI         ++  M ++G  P+  T+  LI G CK    
Sbjct: 585 EK-GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643

Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
           + A    + M EKG       + ALI  F        A ++ +EM
Sbjct: 644 KEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 136/548 (24%), Positives = 232/548 (42%), Gaps = 20/548 (3%)

Query: 35  FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
           FL R   +   ++ A  +F++    G+C  N  S N +L  LC+   V      L +M D
Sbjct: 212 FLSRLSCNFEGIKIAVKVFEEFPELGVCW-NTVSCNIVLHCLCQLGKVREAHNLLVQMTD 270

Query: 95  YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDK 153
            G   D  +   ++  YC  G+ DK L + +E+   G   DE++++ +++   K GEV +
Sbjct: 271 RGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVE 330

Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
           A +L+  M    +  +   +  +I GF K   V  A +LFD+M +     D   Y  +I 
Sbjct: 331 AEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIH 390

Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNT 271
           G+CK+ ++  A ++++EM   G+ PD    + LI      GE+     V      + +  
Sbjct: 391 GICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450

Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
             +   ++   L  NG ID A  LL  M +               KG + PN  +++ I+
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSR---------------KG-LQPNVYTYNTIV 494

Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
           N L K G ++  + L  EM   G   +   Y  L+D  C    + +++ELLR M     +
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554

Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
           PT  T N +    C    +     L+  M  +G  P       L+K+ C           
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614

Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
              M   G +PD   Y+  I G    + +  A  L +++   G       Y+ +I G  K
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYK 674

Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
            ++  EA  LF EM   GL+     Y++ ++   + GN +  +      + + SG+  V+
Sbjct: 675 RKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVV 734

Query: 572 TYTTLIDG 579
                I G
Sbjct: 735 YICFFIGG 742


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 27/443 (6%)

Query: 188 KALQLFDKMTKSGFASDAAMYDV--IIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILS 244
            AL +F  +  S  +   + +    II  LC++ +   ALQL+ +M    G +PD   LS
Sbjct: 128 SALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLS 187

Query: 245 KLITSCSD----EGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
            L++SC+     +   TLL K    +          N +M  L+  G +     L +  I
Sbjct: 188 FLVSSCTCANLLDASATLLSKA--SEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWI 245

Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
           +                   SP+  SF+++I  + + G++  AL L   M + GC  +  
Sbjct: 246 QDR---------------VYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV 290

Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
            +N ++DGLC +N +   +E+LR ++  G   P   T  S+    C+   +  A+ +   
Sbjct: 291 THNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYND 350

Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
           M   G  P      +LI    K G    A      M +    PD+V +S+ I G     +
Sbjct: 351 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 410

Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM-ITKGLIPSVATYN 538
           +D AL ++ D+  H   P+V  ++III  LCK  R  EA  L NE+ +   + P    YN
Sbjct: 411 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYN 470

Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
            +I+  CK G +D+A L + + +E++   PD  TYT LI G C+  R  +AIM ++EM E
Sbjct: 471 PVIDVLCKCGKVDEANL-IRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVE 529

Query: 599 KGCAPNRITFMALITGLCKCDRP 621
            GC+P+ IT    I+ L K   P
Sbjct: 530 AGCSPDSITVNCFISCLLKAGMP 552



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 2/333 (0%)

Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQ-NVFLYNNLIDGLCNSNRLEESYELLRE 384
           +++ ++++L+  G++   ++LF    Q      +V+ +N +I G+C   +++++ EL+  
Sbjct: 220 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 279

Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH-EPWVKHNTLLIKELCKHG 443
           M E G  P   T N +   LCR  +V     ++R+++  G   P V   T +I   CK G
Sbjct: 280 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339

Query: 444 KAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
           K  +A     DMV  G +P+ V Y+  I G   +  +  A+E+++ +    C PDVV ++
Sbjct: 340 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 399

Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
            +I G C+  ++ +A  ++++M    + P+V T++++I+  CK    D+A+  L+ +  +
Sbjct: 400 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLR 459

Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
              +P    Y  +ID LC  G+ D+A ++   MEEKGC P++ T+  LI G C   R   
Sbjct: 460 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 519

Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
           A++ F  M E G  PD       IS  L    P
Sbjct: 520 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMP 552



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 11/327 (3%)

Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRLEE 377
           +++P+  S   II  L + G+   AL LF +M T  G   +    + L+     +N L+ 
Sbjct: 142 SITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDA 201

Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLVRKMRVQGHEPWVKHNTL 434
           S  LL +  E G +   +  N +   L  R    DVV       + RV   + W     +
Sbjct: 202 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVW--SFNV 259

Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
           +IK +C+ G+  +A   +  M + G  PD V ++  + GL     V    E+ R +   G
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319

Query: 495 CC-PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
            C P+VV +  +ISG CKA ++ +A  ++N+M+  G++P+  TYN+LING+ K G++  A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379

Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
           +    +M       PDV+T+++LIDG C  G+ DDA+ +W++M +    PN  TF  +I 
Sbjct: 380 VEVYQQMTRLRC-PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIH 438

Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDM 640
            LCK +R   A+    ++ E  ++PD+
Sbjct: 439 SLCKQNRSDEAIC---LLNELNLRPDI 462



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 194/455 (42%), Gaps = 55/455 (12%)

Query: 107 LLQVYCNSGQFDKALSVFNEIIDH-GWV-DEHVFSILLVAFSKWGEVDKACELIERMDDC 164
           ++ V C SG+   AL +F+++  H G+  D    S L+ + +    +D +  L+ +  + 
Sbjct: 153 IIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEF 212

Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG-FASDAAMYDVIIGGLCKNKQLEM 223
             R+    +  L+   + + RV   + LF++  +   ++ D   ++V+I G+C+  Q++ 
Sbjct: 213 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 272

Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
           AL+L   M   G +PD                                 T+  N I+  L
Sbjct: 273 ALELVERMNEFGCSPD---------------------------------TVTHNIIVDGL 299

Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
                + + + +L+ + +                G   PN  +F  +I+   K GKL+ A
Sbjct: 300 CRTNEVSRGHEVLRRLQR---------------DGVCMPNVVTFTSVISGYCKAGKLEDA 344

Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
           ++++ +M   G M N   YN LI+G      L  + E+ ++M      P   T +S+   
Sbjct: 345 MAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 404

Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLP 462
            CR   +  AL +   M     +P V   +++I  LCK  ++ EA   L ++ ++    P
Sbjct: 405 YCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAP 464

Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
               Y+  I  L    +VD A  + + +   GC PD   Y I+I G C   R++EA   F
Sbjct: 465 QAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFF 524

Query: 523 NEMITKGLIPSVATYNLLINGWCKSG---NIDQAM 554
           +EM+  G  P   T N  I+   K+G    +D  M
Sbjct: 525 HEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 559



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 21/363 (5%)

Query: 26  CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
           C +   A   L+  L   G V +   LF++  ++ +  P+ +S+N +++ +C+   V   
Sbjct: 214 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKA 273

Query: 86  EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
              ++ M ++G   D  T   ++   C + +  +   V   +   G    +V  F+ ++ 
Sbjct: 274 LELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 333

Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
            + K G+++ A  +   M    I  N  T+ VLI+G+ K   +  A++++ +MT+     
Sbjct: 334 GYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPP 393

Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLV 260
           D   +  +I G C+  QL+ AL+++S+M    I P+    S +I S   +    E   L+
Sbjct: 394 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLL 453

Query: 261 KEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTV 320
            E+    D+     + N ++ +L   G +D+A NL++   KG           M  KG  
Sbjct: 454 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA-NLIR---KG-----------MEEKG-C 497

Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
            P+  ++ I+I       ++  A+  F EM + GC  +    N  I  L  +    E   
Sbjct: 498 RPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDH 557

Query: 381 LLR 383
           ++R
Sbjct: 558 VMR 560



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 2/170 (1%)

Query: 483 ALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
           AL+LF  +  H G  PD    + ++S    A  +  +  L ++    G       YN L+
Sbjct: 166 ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLM 225

Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
           +     G +   +    R ++    SPDV ++  +I G+C  G+   A+ L   M E GC
Sbjct: 226 SSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 285

Query: 602 APNRITFMALITGLCKCDR-PRAALVHFRMMKEKGMKPDMFVFVALISAF 650
           +P+ +T   ++ GLC+ +   R   V  R+ ++    P++  F ++IS +
Sbjct: 286 SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGY 335



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 53/113 (46%)

Query: 19  QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
            D+ + R   +      +I  L      +EA  L +++       P  + YN +++ LCK
Sbjct: 419 SDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCK 478

Query: 79  SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG 131
              VD   +  K M++ G   DKYT T L+  YC   +  +A+  F+E+++ G
Sbjct: 479 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 531


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.139    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,808,268,471
Number of Sequences: 23463169
Number of extensions: 398045548
Number of successful extensions: 1450471
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7471
Number of HSP's successfully gapped in prelim test: 4852
Number of HSP's that attempted gapping in prelim test: 1131838
Number of HSP's gapped (non-prelim): 99999
length of query: 666
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 517
effective length of database: 8,863,183,186
effective search space: 4582265707162
effective search space used: 4582265707162
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)